Query 020314
Match_columns 327
No_of_seqs 140 out of 1492
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 08:45:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020314.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020314hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 3.5E-59 7.6E-64 397.2 25.4 306 4-327 1-337 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 8.8E-55 1.9E-59 379.7 27.7 313 7-327 1-326 (326)
3 KOG1197 Predicted quinone oxid 100.0 2.7E-53 5.8E-58 337.4 23.1 317 2-327 4-330 (336)
4 KOG0023 Alcohol dehydrogenase, 100.0 4.7E-51 1E-55 336.1 23.6 312 1-327 4-354 (360)
5 KOG0024 Sorbitol dehydrogenase 100.0 5.1E-50 1.1E-54 330.8 22.7 308 5-326 3-351 (354)
6 COG1062 AdhC Zn-dependent alco 100.0 1.8E-49 3.9E-54 330.5 21.2 308 5-327 1-366 (366)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 1.9E-47 4.1E-52 343.2 26.3 308 7-325 1-371 (371)
8 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.1E-46 4.6E-51 335.0 28.0 307 6-326 1-357 (358)
9 cd08239 THR_DH_like L-threonin 100.0 5.4E-46 1.2E-50 330.4 27.6 305 7-327 1-339 (339)
10 PLN02586 probable cinnamyl alc 100.0 8E-46 1.7E-50 330.7 28.6 307 3-327 9-353 (360)
11 PRK09880 L-idonate 5-dehydroge 100.0 1.2E-45 2.7E-50 328.2 27.9 303 5-327 3-343 (343)
12 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.2E-45 6.8E-50 323.1 28.4 297 9-325 1-328 (329)
13 PLN02740 Alcohol dehydrogenase 100.0 4.1E-45 8.8E-50 328.9 28.3 311 3-327 7-381 (381)
14 KOG0022 Alcohol dehydrogenase, 100.0 6.8E-46 1.5E-50 304.2 20.3 311 3-327 4-375 (375)
15 PLN02827 Alcohol dehydrogenase 100.0 5.3E-45 1.1E-49 327.3 27.5 305 5-327 11-376 (378)
16 cd08291 ETR_like_1 2-enoyl thi 100.0 1.1E-44 2.4E-49 319.9 27.0 309 7-325 1-323 (324)
17 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.4E-44 5.1E-49 322.5 28.6 306 7-327 2-368 (368)
18 PLN02178 cinnamyl-alcohol dehy 100.0 2.4E-44 5.1E-49 322.2 28.5 307 6-327 4-348 (375)
19 cd08300 alcohol_DH_class_III c 100.0 8.5E-44 1.8E-48 319.2 28.5 307 5-326 1-368 (368)
20 cd08301 alcohol_DH_plants Plan 100.0 6.9E-44 1.5E-48 320.1 27.5 306 5-325 1-368 (369)
21 PLN03154 putative allyl alcoho 100.0 8.3E-44 1.8E-48 316.3 27.5 314 3-327 5-345 (348)
22 PLN02514 cinnamyl-alcohol dehy 100.0 1.4E-43 3.1E-48 316.2 28.6 305 5-327 8-350 (357)
23 cd08230 glucose_DH Glucose deh 100.0 8.8E-44 1.9E-48 317.8 26.6 308 7-327 1-355 (355)
24 TIGR01202 bchC 2-desacetyl-2-h 100.0 1E-43 2.3E-48 310.8 26.4 293 6-326 1-308 (308)
25 cd08277 liver_alcohol_DH_like 100.0 2.1E-43 4.6E-48 316.3 27.9 306 5-326 1-365 (365)
26 PRK10309 galactitol-1-phosphat 100.0 2.8E-43 6.2E-48 313.8 27.8 305 7-327 1-346 (347)
27 TIGR02819 fdhA_non_GSH formald 100.0 3.5E-43 7.6E-48 316.1 27.1 304 6-327 2-390 (393)
28 cd08292 ETR_like_2 2-enoyl thi 100.0 8.6E-43 1.9E-47 308.0 27.4 312 7-326 1-324 (324)
29 KOG0025 Zn2+-binding dehydroge 100.0 8.5E-43 1.8E-47 282.5 24.6 317 3-326 16-351 (354)
30 cd08238 sorbose_phosphate_red 100.0 8.3E-43 1.8E-47 316.6 26.9 312 5-327 1-368 (410)
31 cd08237 ribitol-5-phosphate_DH 100.0 8.2E-43 1.8E-47 309.4 25.5 299 5-327 1-339 (341)
32 cd08294 leukotriene_B4_DH_like 100.0 2E-42 4.4E-47 306.3 27.3 305 6-327 2-329 (329)
33 cd08233 butanediol_DH_like (2R 100.0 2.9E-42 6.2E-47 307.9 27.1 306 7-326 1-351 (351)
34 cd08295 double_bond_reductase_ 100.0 3.7E-42 8.1E-47 305.5 27.2 309 7-327 8-338 (338)
35 TIGR03201 dearomat_had 6-hydro 100.0 4.9E-42 1.1E-46 305.8 27.7 302 10-327 2-349 (349)
36 TIGR02825 B4_12hDH leukotriene 100.0 4.6E-42 9.9E-47 303.4 26.9 302 8-326 2-325 (325)
37 cd08293 PTGR2 Prostaglandin re 100.0 6.3E-42 1.4E-46 305.1 27.8 313 7-327 3-345 (345)
38 cd08246 crotonyl_coA_red croto 100.0 7.1E-42 1.5E-46 309.7 27.3 318 3-326 9-392 (393)
39 cd08231 MDR_TM0436_like Hypoth 100.0 2.1E-41 4.5E-46 303.5 27.9 306 8-327 2-361 (361)
40 COG1063 Tdh Threonine dehydrog 100.0 7.2E-42 1.6E-46 302.5 23.8 307 7-327 1-350 (350)
41 cd08274 MDR9 Medium chain dehy 100.0 5.1E-41 1.1E-45 299.9 28.7 313 7-327 1-350 (350)
42 KOG1198 Zinc-binding oxidoredu 100.0 5.1E-41 1.1E-45 293.0 27.8 317 5-327 3-345 (347)
43 TIGR01751 crot-CoA-red crotony 100.0 4.4E-41 9.5E-46 304.6 27.7 319 3-327 4-387 (398)
44 cd08296 CAD_like Cinnamyl alco 100.0 8E-41 1.7E-45 296.4 28.4 302 7-326 1-333 (333)
45 cd08290 ETR 2-enoyl thioester 100.0 5.8E-41 1.2E-45 298.5 26.5 315 7-327 1-341 (341)
46 cd05284 arabinose_DH_like D-ar 100.0 1.5E-40 3.3E-45 295.6 27.9 308 7-327 1-340 (340)
47 cd08285 NADP_ADH NADP(H)-depen 100.0 1.7E-40 3.8E-45 296.4 27.2 307 7-327 1-351 (351)
48 cd08244 MDR_enoyl_red Possible 100.0 7.1E-40 1.5E-44 289.4 29.7 314 7-327 1-324 (324)
49 TIGR02817 adh_fam_1 zinc-bindi 100.0 4.2E-40 9.1E-45 292.3 27.1 316 8-326 1-334 (336)
50 cd08278 benzyl_alcohol_DH Benz 100.0 5.4E-40 1.2E-44 294.3 27.7 307 5-326 1-365 (365)
51 PRK10754 quinone oxidoreductas 100.0 7.2E-40 1.6E-44 289.8 26.6 313 6-327 1-327 (327)
52 cd08297 CAD3 Cinnamyl alcohol 100.0 2.1E-39 4.6E-44 288.4 28.5 309 7-327 1-341 (341)
53 PTZ00354 alcohol dehydrogenase 100.0 2.1E-39 4.6E-44 287.5 28.4 313 6-326 1-327 (334)
54 cd08270 MDR4 Medium chain dehy 100.0 3.7E-39 8.1E-44 282.5 29.3 299 7-327 1-305 (305)
55 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.1E-39 4.5E-44 286.5 27.8 312 7-327 1-325 (325)
56 COG2130 Putative NADP-dependen 100.0 1.3E-39 2.8E-44 266.7 24.2 307 7-327 9-338 (340)
57 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.7E-39 3.6E-44 291.7 26.7 307 7-326 1-367 (367)
58 PRK10083 putative oxidoreducta 100.0 5.3E-39 1.2E-43 285.6 27.6 302 7-327 1-337 (339)
59 cd08260 Zn_ADH6 Alcohol dehydr 100.0 7.1E-39 1.5E-43 285.4 28.0 306 7-326 1-344 (345)
60 cd08283 FDH_like_1 Glutathione 100.0 5.6E-39 1.2E-43 289.6 27.3 306 7-327 1-386 (386)
61 cd08240 6_hydroxyhexanoate_dh_ 100.0 7.8E-39 1.7E-43 285.7 27.5 309 7-327 1-350 (350)
62 PRK13771 putative alcohol dehy 100.0 7.6E-39 1.6E-43 284.0 25.9 304 7-327 1-333 (334)
63 cd05283 CAD1 Cinnamyl alcohol 100.0 2.1E-38 4.6E-43 281.3 28.3 300 8-326 1-337 (337)
64 cd08289 MDR_yhfp_like Yhfp put 100.0 9E-39 2E-43 282.6 25.6 314 7-327 1-326 (326)
65 cd08259 Zn_ADH5 Alcohol dehydr 100.0 2.2E-38 4.8E-43 280.8 27.8 304 7-326 1-332 (332)
66 cd05278 FDH_like Formaldehyde 100.0 1.3E-38 2.8E-43 284.0 26.4 306 7-327 1-347 (347)
67 cd08249 enoyl_reductase_like e 100.0 1.3E-38 2.8E-43 282.9 25.8 313 7-327 1-339 (339)
68 TIGR02823 oxido_YhdH putative 100.0 3.5E-38 7.6E-43 278.5 27.6 308 8-327 1-323 (323)
69 cd08279 Zn_ADH_class_III Class 100.0 3.4E-38 7.3E-43 282.7 27.6 305 7-324 1-362 (363)
70 PRK09422 ethanol-active dehydr 100.0 3.2E-38 7E-43 280.5 26.8 302 7-326 1-335 (338)
71 cd08261 Zn_ADH7 Alcohol dehydr 100.0 5.2E-38 1.1E-42 279.0 28.0 303 7-327 1-337 (337)
72 cd08248 RTN4I1 Human Reticulon 100.0 9.8E-38 2.1E-42 278.7 29.9 317 7-326 1-350 (350)
73 cd08299 alcohol_DH_class_I_II_ 100.0 4.7E-38 1E-42 282.2 27.4 307 5-327 6-373 (373)
74 cd08235 iditol_2_DH_like L-idi 100.0 6.4E-38 1.4E-42 279.1 27.2 303 7-326 1-343 (343)
75 cd05282 ETR_like 2-enoyl thioe 100.0 5.4E-38 1.2E-42 277.3 26.5 308 12-326 3-323 (323)
76 cd08276 MDR7 Medium chain dehy 100.0 1.8E-37 3.9E-42 275.3 29.8 311 7-327 1-336 (336)
77 cd08243 quinone_oxidoreductase 100.0 1.1E-37 2.3E-42 274.9 28.0 307 7-325 1-319 (320)
78 cd08250 Mgc45594_like Mgc45594 100.0 9.3E-38 2E-42 276.5 27.7 310 6-326 1-329 (329)
79 cd08256 Zn_ADH2 Alcohol dehydr 100.0 8.7E-38 1.9E-42 278.9 27.2 304 7-325 1-350 (350)
80 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.4E-37 3E-42 276.3 28.3 308 7-327 1-338 (338)
81 cd05279 Zn_ADH1 Liver alcohol 100.0 6.6E-38 1.4E-42 280.8 26.2 302 8-325 2-364 (365)
82 cd08284 FDH_like_2 Glutathione 100.0 9E-38 2E-42 278.3 26.9 303 7-327 1-344 (344)
83 PRK05396 tdh L-threonine 3-deh 100.0 9.6E-38 2.1E-42 277.7 26.7 307 7-327 1-340 (341)
84 cd08286 FDH_like_ADH2 formalde 100.0 2.3E-37 5E-42 275.7 27.9 305 7-327 1-345 (345)
85 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2E-37 4.3E-42 275.7 27.1 305 7-326 1-341 (341)
86 cd08282 PFDH_like Pseudomonas 100.0 3.7E-37 8E-42 276.9 28.4 302 7-327 1-375 (375)
87 cd08247 AST1_like AST1 is a cy 100.0 1.3E-36 2.8E-41 271.6 31.4 313 7-327 1-352 (352)
88 cd08271 MDR5 Medium chain dehy 100.0 1.9E-36 4.1E-41 267.5 31.0 312 7-327 1-325 (325)
89 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.8E-37 6.1E-42 273.0 25.5 298 7-324 1-325 (325)
90 cd08266 Zn_ADH_like1 Alcohol d 100.0 9.8E-37 2.1E-41 271.1 28.7 312 7-327 1-342 (342)
91 cd08252 AL_MDR Arginate lyase 100.0 1.1E-36 2.5E-41 270.3 29.1 314 7-326 1-336 (336)
92 cd08298 CAD2 Cinnamyl alcohol 100.0 1.3E-36 2.8E-41 269.2 28.9 298 7-325 1-329 (329)
93 cd08273 MDR8 Medium chain dehy 100.0 1.5E-36 3.2E-41 269.1 29.2 309 7-325 1-330 (331)
94 cd05281 TDH Threonine dehydrog 100.0 7.9E-37 1.7E-41 271.7 27.0 307 7-327 1-341 (341)
95 cd08242 MDR_like Medium chain 100.0 9.7E-37 2.1E-41 268.8 26.8 287 7-327 1-319 (319)
96 cd05276 p53_inducible_oxidored 100.0 1.2E-36 2.6E-41 268.2 27.2 311 7-325 1-323 (323)
97 cd08272 MDR6 Medium chain dehy 100.0 2.4E-36 5.3E-41 266.8 28.7 309 7-327 1-326 (326)
98 cd05285 sorbitol_DH Sorbitol d 100.0 9.5E-37 2.1E-41 271.4 26.1 301 10-326 2-342 (343)
99 cd08236 sugar_DH NAD(P)-depend 100.0 1.1E-36 2.4E-41 271.1 26.6 303 7-325 1-343 (343)
100 cd08287 FDH_like_ADH3 formalde 100.0 1.2E-36 2.6E-41 271.2 26.6 303 7-327 1-345 (345)
101 cd05288 PGDH Prostaglandin deh 100.0 1.2E-36 2.6E-41 269.4 26.3 309 6-325 1-329 (329)
102 cd08288 MDR_yhdh Yhdh putative 100.0 3E-36 6.5E-41 266.3 28.2 310 7-327 1-324 (324)
103 cd08267 MDR1 Medium chain dehy 100.0 5.9E-36 1.3E-40 263.7 30.0 308 11-325 2-319 (319)
104 cd05289 MDR_like_2 alcohol deh 100.0 8.5E-36 1.8E-40 261.3 30.5 306 7-325 1-309 (309)
105 cd08234 threonine_DH_like L-th 100.0 2.8E-36 6.1E-41 267.6 26.5 300 7-325 1-333 (334)
106 cd08265 Zn_ADH3 Alcohol dehydr 100.0 2.2E-36 4.7E-41 272.7 26.0 295 22-325 39-383 (384)
107 cd05286 QOR2 Quinone oxidoredu 100.0 6.2E-36 1.3E-40 263.3 28.3 310 8-327 1-320 (320)
108 cd08253 zeta_crystallin Zeta-c 100.0 9.1E-36 2E-40 262.9 28.7 312 7-327 1-325 (325)
109 TIGR00692 tdh L-threonine 3-de 100.0 5.4E-36 1.2E-40 266.3 26.1 301 13-327 5-340 (340)
110 cd08269 Zn_ADH9 Alcohol dehydr 100.0 9.9E-36 2.2E-40 261.6 25.8 295 20-325 5-311 (312)
111 cd08245 CAD Cinnamyl alcohol d 100.0 2.1E-35 4.6E-40 261.5 27.7 300 8-325 1-330 (330)
112 cd08232 idonate-5-DH L-idonate 100.0 2.8E-35 6.1E-40 261.7 28.3 295 20-327 7-339 (339)
113 PLN02702 L-idonate 5-dehydroge 100.0 2.2E-35 4.7E-40 264.7 27.6 307 6-327 17-364 (364)
114 TIGR02824 quinone_pig3 putativ 100.0 4.5E-35 9.8E-40 258.5 27.4 313 7-327 1-325 (325)
115 cd08258 Zn_ADH4 Alcohol dehydr 100.0 6.8E-35 1.5E-39 255.2 25.5 272 7-292 1-306 (306)
116 cd08268 MDR2 Medium chain dehy 100.0 1.1E-34 2.5E-39 256.2 26.5 313 7-327 1-328 (328)
117 cd08275 MDR3 Medium chain dehy 100.0 1E-33 2.3E-38 251.3 27.0 311 8-327 1-337 (337)
118 cd08251 polyketide_synthase po 100.0 3.7E-34 8E-39 250.3 23.3 289 29-325 2-303 (303)
119 cd08241 QOR1 Quinone oxidoredu 100.0 2.8E-33 6.1E-38 246.8 28.2 311 7-326 1-323 (323)
120 KOG1196 Predicted NAD-dependen 100.0 3E-32 6.6E-37 222.6 24.4 311 6-327 3-340 (343)
121 TIGR03366 HpnZ_proposed putati 100.0 1.4E-33 3E-38 243.8 16.0 231 69-307 1-280 (280)
122 cd05195 enoyl_red enoyl reduct 100.0 3E-32 6.5E-37 236.6 22.9 280 35-325 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 1.9E-31 4.1E-36 231.2 21.7 275 39-325 2-288 (288)
124 KOG1202 Animal-type fatty acid 100.0 1.5E-32 3.2E-37 256.3 13.7 293 19-327 1426-1741(2376)
125 cd05188 MDR Medium chain reduc 100.0 1.6E-30 3.5E-35 223.6 21.0 243 36-288 1-270 (271)
126 cd08255 2-desacetyl-2-hydroxye 100.0 3.3E-28 7.2E-33 210.2 18.9 245 64-325 18-277 (277)
127 PF08240 ADH_N: Alcohol dehydr 99.8 1.9E-18 4.1E-23 127.3 10.1 82 34-117 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 9.3E-17 2E-21 122.4 5.2 126 165-291 1-130 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.6 4.6E-15 9.9E-20 112.6 7.5 120 196-325 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.3 6.7E-12 1.5E-16 112.0 11.1 173 136-326 188-375 (413)
131 PRK09424 pntA NAD(P) transhydr 99.3 4.8E-11 1E-15 109.2 12.0 144 151-296 162-334 (509)
132 PRK11873 arsM arsenite S-adeno 98.2 3.7E-06 8E-11 72.4 6.6 164 152-324 76-258 (272)
133 PF11017 DUF2855: Protein of u 98.2 6E-05 1.3E-09 64.8 13.5 167 68-249 32-231 (314)
134 TIGR00561 pntA NAD(P) transhyd 98.1 5.6E-06 1.2E-10 76.1 6.3 101 152-253 162-288 (511)
135 PRK08306 dipicolinate synthase 98.0 2.7E-05 6E-10 67.5 8.8 94 153-254 151-246 (296)
136 PRK05476 S-adenosyl-L-homocyst 98.0 2.4E-05 5.1E-10 70.6 8.5 103 135-252 197-302 (425)
137 TIGR00936 ahcY adenosylhomocys 97.9 6.2E-05 1.4E-09 67.6 8.7 102 136-252 181-285 (406)
138 PLN02494 adenosylhomocysteinas 97.7 0.00015 3.3E-09 65.8 8.2 100 137-251 241-343 (477)
139 PRK12771 putative glutamate sy 97.7 0.00022 4.7E-09 68.0 9.1 94 152-248 135-252 (564)
140 COG2518 Pcm Protein-L-isoaspar 97.6 0.00081 1.8E-08 54.3 9.8 112 125-248 51-168 (209)
141 PRK00517 prmA ribosomal protei 97.5 0.0008 1.7E-08 57.1 9.7 141 86-251 65-215 (250)
142 PTZ00075 Adenosylhomocysteinas 97.5 0.00093 2E-08 60.9 9.8 101 137-252 241-344 (476)
143 TIGR00518 alaDH alanine dehydr 97.3 0.00079 1.7E-08 60.4 7.8 97 153-253 166-271 (370)
144 COG4221 Short-chain alcohol de 97.3 0.00066 1.4E-08 55.9 6.2 77 153-229 5-91 (246)
145 COG0300 DltE Short-chain dehyd 97.3 0.00047 1E-08 58.1 5.4 78 152-229 4-94 (265)
146 TIGR02853 spore_dpaA dipicolin 97.3 0.0014 3E-08 56.6 8.2 94 153-254 150-245 (287)
147 PF01488 Shikimate_DH: Shikima 97.2 0.0019 4.2E-08 49.1 8.0 92 153-251 11-111 (135)
148 PRK08324 short chain dehydroge 97.0 0.00084 1.8E-08 65.5 4.8 112 101-228 385-507 (681)
149 PRK05786 fabG 3-ketoacyl-(acyl 97.0 0.0023 5.1E-08 53.6 7.0 35 153-187 4-38 (238)
150 PRK12742 oxidoreductase; Provi 97.0 0.0026 5.6E-08 53.3 7.1 75 153-229 5-85 (237)
151 COG3967 DltE Short-chain dehyd 96.9 0.0025 5.3E-08 51.0 5.8 77 153-229 4-88 (245)
152 cd05213 NAD_bind_Glutamyl_tRNA 96.9 0.0014 3.1E-08 57.4 4.9 109 113-232 140-251 (311)
153 PRK05993 short chain dehydroge 96.8 0.0041 8.9E-08 53.6 6.8 77 153-229 3-86 (277)
154 PF00670 AdoHcyase_NAD: S-aden 96.7 0.017 3.6E-07 44.9 9.1 103 136-253 9-114 (162)
155 PRK12367 short chain dehydroge 96.7 0.0071 1.5E-07 51.1 7.8 73 153-229 13-89 (245)
156 PRK05693 short chain dehydroge 96.7 0.0042 9.2E-08 53.4 6.3 75 155-229 2-82 (274)
157 PRK08177 short chain dehydroge 96.6 0.0097 2.1E-07 49.5 7.9 75 155-229 2-81 (225)
158 PRK06718 precorrin-2 dehydroge 96.5 0.017 3.6E-07 47.2 8.3 92 153-251 9-102 (202)
159 PRK00045 hemA glutamyl-tRNA re 96.5 0.0097 2.1E-07 54.6 7.3 145 68-231 90-254 (423)
160 PRK06719 precorrin-2 dehydroge 96.5 0.025 5.4E-07 44.2 8.6 90 153-250 12-101 (157)
161 PRK11705 cyclopropane fatty ac 96.4 0.0087 1.9E-07 54.0 6.7 106 132-248 151-266 (383)
162 KOG1205 Predicted dehydrogenas 96.4 0.0064 1.4E-07 51.8 5.3 78 152-229 10-101 (282)
163 PRK06139 short chain dehydroge 96.4 0.0076 1.6E-07 53.4 6.1 77 153-229 6-94 (330)
164 PRK06182 short chain dehydroge 96.4 0.01 2.3E-07 50.9 6.7 77 153-229 2-84 (273)
165 PF02826 2-Hacid_dh_C: D-isome 96.3 0.012 2.7E-07 47.0 6.4 89 152-251 34-129 (178)
166 PRK07060 short chain dehydroge 96.3 0.011 2.3E-07 49.7 6.3 75 153-229 8-87 (245)
167 TIGR01470 cysG_Nterm siroheme 96.3 0.031 6.8E-07 45.7 8.7 92 153-251 8-102 (205)
168 PRK09291 short chain dehydroge 96.3 0.014 3.1E-07 49.4 6.9 74 154-229 2-83 (257)
169 PF12847 Methyltransf_18: Meth 96.3 0.0059 1.3E-07 44.5 3.9 90 153-247 1-109 (112)
170 PRK06057 short chain dehydroge 96.2 0.011 2.3E-07 50.2 6.0 77 153-229 6-89 (255)
171 PRK08017 oxidoreductase; Provi 96.2 0.019 4.1E-07 48.6 7.3 75 155-229 3-84 (256)
172 PRK08261 fabG 3-ketoacyl-(acyl 96.2 0.01 2.2E-07 55.0 6.0 78 152-229 208-294 (450)
173 cd01080 NAD_bind_m-THF_DH_Cycl 96.2 0.1 2.2E-06 41.2 10.7 96 127-252 22-119 (168)
174 PRK00377 cbiT cobalt-precorrin 96.2 0.027 5.8E-07 45.9 7.7 93 152-247 39-143 (198)
175 cd01078 NAD_bind_H4MPT_DH NADP 96.1 0.092 2E-06 42.6 10.7 96 153-251 27-131 (194)
176 PLN03209 translocon at the inn 96.1 0.018 3.9E-07 54.1 7.2 36 152-187 78-113 (576)
177 PRK14175 bifunctional 5,10-met 96.1 0.097 2.1E-06 44.9 11.1 96 128-252 137-233 (286)
178 TIGR00406 prmA ribosomal prote 96.1 0.018 3.9E-07 49.9 6.9 93 152-251 158-261 (288)
179 PRK07806 short chain dehydroge 96.1 0.025 5.5E-07 47.6 7.7 35 153-187 5-39 (248)
180 KOG1209 1-Acyl dihydroxyaceton 96.1 0.04 8.7E-07 44.5 8.0 78 153-230 6-92 (289)
181 PRK06196 oxidoreductase; Provi 96.1 0.015 3.2E-07 51.2 6.3 77 153-229 25-109 (315)
182 PRK05872 short chain dehydroge 96.1 0.012 2.6E-07 51.3 5.7 77 153-229 8-95 (296)
183 PRK05866 short chain dehydroge 96.1 0.017 3.7E-07 50.2 6.6 35 153-187 39-73 (293)
184 PRK06949 short chain dehydroge 96.1 0.012 2.6E-07 49.9 5.6 36 152-187 7-42 (258)
185 PF01135 PCMT: Protein-L-isoas 96.0 0.017 3.6E-07 47.4 5.9 97 142-247 66-170 (209)
186 PRK13943 protein-L-isoaspartat 96.0 0.044 9.6E-07 48.1 8.7 92 152-247 79-178 (322)
187 KOG1252 Cystathionine beta-syn 96.0 0.33 7.1E-06 42.1 13.4 51 152-202 101-155 (362)
188 COG2264 PrmA Ribosomal protein 95.9 0.055 1.2E-06 46.5 8.7 147 88-251 109-265 (300)
189 PRK14192 bifunctional 5,10-met 95.9 0.11 2.4E-06 44.7 10.7 78 152-252 157-234 (283)
190 PRK13942 protein-L-isoaspartat 95.9 0.095 2.1E-06 43.2 9.8 96 142-248 70-175 (212)
191 PF13460 NAD_binding_10: NADH( 95.9 0.027 5.8E-07 45.1 6.4 88 157-249 1-97 (183)
192 PF02353 CMAS: Mycolic acid cy 95.9 0.0099 2.1E-07 50.9 4.0 98 137-247 51-164 (273)
193 PRK07904 short chain dehydroge 95.8 0.035 7.6E-07 47.1 7.3 36 152-187 6-42 (253)
194 PRK08339 short chain dehydroge 95.8 0.025 5.4E-07 48.3 6.3 35 153-187 7-41 (263)
195 PRK06953 short chain dehydroge 95.8 0.034 7.4E-07 46.1 6.9 75 155-229 2-80 (222)
196 PRK07814 short chain dehydroge 95.8 0.026 5.7E-07 48.1 6.3 35 153-187 9-43 (263)
197 PRK06505 enoyl-(acyl carrier p 95.7 0.054 1.2E-06 46.5 8.1 76 153-228 6-94 (271)
198 TIGR03325 BphB_TodD cis-2,3-di 95.7 0.028 6E-07 47.9 6.2 77 153-229 4-89 (262)
199 PRK05867 short chain dehydroge 95.7 0.027 5.8E-07 47.7 6.1 35 153-187 8-42 (253)
200 PRK12829 short chain dehydroge 95.7 0.03 6.6E-07 47.6 6.4 36 152-187 9-44 (264)
201 PRK03369 murD UDP-N-acetylmura 95.6 0.035 7.6E-07 52.0 7.1 71 152-230 10-81 (488)
202 PRK08261 fabG 3-ketoacyl-(acyl 95.6 0.031 6.7E-07 51.8 6.7 79 152-251 32-125 (450)
203 PRK09072 short chain dehydroge 95.6 0.033 7.2E-07 47.5 6.4 35 153-187 4-38 (263)
204 TIGR00507 aroE shikimate 5-deh 95.6 0.2 4.3E-06 43.0 11.1 91 152-251 115-216 (270)
205 PRK06180 short chain dehydroge 95.6 0.037 7.9E-07 47.6 6.6 77 153-229 3-88 (277)
206 KOG1201 Hydroxysteroid 17-beta 95.6 0.042 9.1E-07 46.8 6.6 77 152-229 36-124 (300)
207 PRK12481 2-deoxy-D-gluconate 3 95.6 0.032 6.8E-07 47.3 6.1 77 153-229 7-93 (251)
208 PRK07326 short chain dehydroge 95.6 0.034 7.4E-07 46.5 6.2 35 153-187 5-39 (237)
209 PRK07831 short chain dehydroge 95.6 0.023 5E-07 48.4 5.2 36 152-187 15-51 (262)
210 PRK06841 short chain dehydroge 95.6 0.021 4.7E-07 48.3 5.0 36 153-188 14-49 (255)
211 PRK06200 2,3-dihydroxy-2,3-dih 95.6 0.03 6.4E-07 47.8 5.9 77 153-229 5-90 (263)
212 TIGR01832 kduD 2-deoxy-D-gluco 95.6 0.039 8.4E-07 46.5 6.5 77 153-229 4-90 (248)
213 PRK08217 fabG 3-ketoacyl-(acyl 95.6 0.027 5.8E-07 47.5 5.6 35 153-187 4-38 (253)
214 PRK07533 enoyl-(acyl carrier p 95.5 0.058 1.2E-06 45.9 7.5 76 153-228 9-97 (258)
215 PRK07825 short chain dehydroge 95.5 0.051 1.1E-06 46.6 7.2 77 153-229 4-88 (273)
216 KOG1014 17 beta-hydroxysteroid 95.5 0.054 1.2E-06 46.4 6.9 77 152-229 47-136 (312)
217 PRK06179 short chain dehydroge 95.5 0.037 8.1E-07 47.3 6.2 35 153-187 3-37 (270)
218 PLN02657 3,8-divinyl protochlo 95.5 0.042 9E-07 49.9 6.7 36 152-187 58-93 (390)
219 PRK06483 dihydromonapterin red 95.4 0.044 9.6E-07 45.8 6.4 76 154-229 2-84 (236)
220 PRK06194 hypothetical protein; 95.4 0.039 8.5E-07 47.6 6.2 35 153-187 5-39 (287)
221 PRK12828 short chain dehydroge 95.4 0.044 9.4E-07 45.7 6.2 35 153-187 6-40 (239)
222 PRK08265 short chain dehydroge 95.4 0.048 1E-06 46.4 6.5 77 153-229 5-90 (261)
223 COG2226 UbiE Methylase involve 95.4 0.17 3.8E-06 42.2 9.4 94 152-249 50-156 (238)
224 PRK13940 glutamyl-tRNA reducta 95.3 0.12 2.7E-06 47.1 9.2 93 153-252 180-276 (414)
225 PRK06463 fabG 3-ketoacyl-(acyl 95.3 0.046 9.9E-07 46.4 6.2 77 153-229 6-89 (255)
226 PRK06500 short chain dehydroge 95.3 0.047 1E-06 46.0 6.2 77 153-229 5-90 (249)
227 PRK06523 short chain dehydroge 95.3 0.019 4.1E-07 48.8 3.8 37 152-188 7-43 (260)
228 PRK07109 short chain dehydroge 95.3 0.049 1.1E-06 48.3 6.6 77 153-229 7-95 (334)
229 PF02882 THF_DHG_CYH_C: Tetrah 95.3 0.51 1.1E-05 36.8 11.3 97 127-252 14-111 (160)
230 PRK08993 2-deoxy-D-gluconate 3 95.3 0.043 9.4E-07 46.5 6.0 77 153-229 9-95 (253)
231 PRK07478 short chain dehydroge 95.3 0.052 1.1E-06 46.0 6.4 35 153-187 5-39 (254)
232 TIGR01035 hemA glutamyl-tRNA r 95.3 0.075 1.6E-06 48.7 7.7 142 68-231 88-252 (417)
233 PRK08340 glucose-1-dehydrogena 95.3 0.051 1.1E-06 46.2 6.3 32 156-187 2-33 (259)
234 PRK00258 aroE shikimate 5-dehy 95.3 0.29 6.3E-06 42.2 11.0 93 152-250 121-222 (278)
235 PRK07677 short chain dehydroge 95.3 0.039 8.5E-07 46.7 5.6 34 154-187 1-34 (252)
236 PRK08862 short chain dehydroge 95.2 0.088 1.9E-06 43.9 7.5 35 153-187 4-38 (227)
237 PRK07063 short chain dehydroge 95.2 0.044 9.5E-07 46.6 5.8 35 153-187 6-40 (260)
238 PRK07453 protochlorophyllide o 95.2 0.042 9.1E-07 48.5 5.9 35 153-187 5-39 (322)
239 COG2230 Cfa Cyclopropane fatty 95.2 0.15 3.3E-06 43.5 8.8 99 135-249 59-176 (283)
240 PRK05562 precorrin-2 dehydroge 95.2 0.14 3E-06 42.3 8.3 93 152-251 23-118 (223)
241 PRK14191 bifunctional 5,10-met 95.2 0.29 6.4E-06 41.9 10.5 97 128-252 136-232 (285)
242 PLN02253 xanthoxin dehydrogena 95.2 0.055 1.2E-06 46.6 6.3 35 153-187 17-51 (280)
243 PRK13394 3-hydroxybutyrate deh 95.2 0.067 1.4E-06 45.4 6.7 35 153-187 6-40 (262)
244 PRK08628 short chain dehydroge 95.1 0.061 1.3E-06 45.6 6.5 36 152-187 5-40 (258)
245 cd05212 NAD_bind_m-THF_DH_Cycl 95.1 0.48 1E-05 36.1 10.5 96 128-252 7-103 (140)
246 PRK07424 bifunctional sterol d 95.1 0.076 1.7E-06 48.3 7.3 35 153-187 177-211 (406)
247 PRK07577 short chain dehydroge 95.1 0.011 2.3E-07 49.5 1.7 36 153-188 2-37 (234)
248 TIGR00080 pimt protein-L-isoas 95.1 0.22 4.8E-06 41.1 9.5 98 142-248 71-176 (215)
249 PRK08415 enoyl-(acyl carrier p 95.1 0.099 2.1E-06 45.0 7.6 77 153-229 4-93 (274)
250 CHL00194 ycf39 Ycf39; Provisio 95.0 0.074 1.6E-06 46.8 6.9 71 156-229 2-74 (317)
251 PRK08267 short chain dehydroge 95.0 0.074 1.6E-06 45.2 6.6 75 155-229 2-87 (260)
252 PRK04148 hypothetical protein; 95.0 0.079 1.7E-06 39.9 5.8 73 152-231 15-89 (134)
253 PRK06079 enoyl-(acyl carrier p 95.0 0.044 9.6E-07 46.4 5.2 37 152-188 5-43 (252)
254 PRK08264 short chain dehydroge 95.0 0.065 1.4E-06 44.8 6.1 72 153-229 5-83 (238)
255 COG2227 UbiG 2-polyprenyl-3-me 95.0 0.055 1.2E-06 44.7 5.2 95 153-251 59-163 (243)
256 PRK08159 enoyl-(acyl carrier p 95.0 0.11 2.4E-06 44.6 7.5 77 152-228 8-97 (272)
257 PRK06138 short chain dehydroge 94.9 0.065 1.4E-06 45.2 6.0 35 153-187 4-38 (252)
258 PRK06197 short chain dehydroge 94.9 0.064 1.4E-06 46.9 6.1 35 153-187 15-49 (306)
259 COG2242 CobL Precorrin-6B meth 94.9 0.16 3.4E-06 40.4 7.5 95 152-250 33-136 (187)
260 PRK10792 bifunctional 5,10-met 94.9 0.46 1E-05 40.8 10.8 95 128-251 138-233 (285)
261 KOG1200 Mitochondrial/plastidi 94.9 0.11 2.3E-06 41.5 6.4 75 154-229 14-100 (256)
262 PRK12939 short chain dehydroge 94.9 0.076 1.7E-06 44.7 6.3 35 153-187 6-40 (250)
263 PRK14183 bifunctional 5,10-met 94.9 0.31 6.7E-06 41.7 9.7 96 128-251 136-231 (281)
264 PRK08278 short chain dehydroge 94.9 0.098 2.1E-06 44.9 7.0 35 153-187 5-39 (273)
265 PRK05717 oxidoreductase; Valid 94.8 0.15 3.3E-06 43.1 8.0 78 152-229 8-94 (255)
266 COG4122 Predicted O-methyltran 94.8 0.093 2E-06 43.1 6.3 94 152-247 58-164 (219)
267 PRK14189 bifunctional 5,10-met 94.8 0.47 1E-05 40.8 10.7 96 128-252 137-233 (285)
268 TIGR02622 CDP_4_6_dhtase CDP-g 94.8 0.094 2E-06 46.8 6.9 35 153-187 3-37 (349)
269 TIGR03206 benzo_BadH 2-hydroxy 94.8 0.08 1.7E-06 44.6 6.2 35 153-187 2-36 (250)
270 cd01065 NAD_bind_Shikimate_DH 94.8 0.53 1.1E-05 36.4 10.4 93 152-251 17-118 (155)
271 PRK08277 D-mannonate oxidoredu 94.8 0.08 1.7E-06 45.5 6.2 35 153-187 9-43 (278)
272 PRK07023 short chain dehydroge 94.8 0.13 2.8E-06 43.2 7.4 33 156-188 3-35 (243)
273 PRK12550 shikimate 5-dehydroge 94.7 0.27 5.9E-06 42.1 9.2 64 153-228 121-187 (272)
274 COG0169 AroE Shikimate 5-dehyd 94.7 0.12 2.7E-06 44.3 7.0 94 152-251 124-228 (283)
275 PRK06935 2-deoxy-D-gluconate 3 94.7 0.082 1.8E-06 44.9 6.0 37 153-189 14-50 (258)
276 PRK07454 short chain dehydroge 94.7 0.098 2.1E-06 43.8 6.4 36 152-187 4-39 (241)
277 PRK12429 3-hydroxybutyrate deh 94.7 0.096 2.1E-06 44.3 6.4 35 153-187 3-37 (258)
278 PRK00107 gidB 16S rRNA methylt 94.7 0.21 4.4E-06 40.3 7.8 93 152-249 44-145 (187)
279 PRK06484 short chain dehydroge 94.6 0.079 1.7E-06 50.1 6.3 78 152-229 3-89 (520)
280 PRK14188 bifunctional 5,10-met 94.6 0.57 1.2E-05 40.6 10.9 95 128-252 137-233 (296)
281 PRK06198 short chain dehydroge 94.6 0.052 1.1E-06 46.1 4.7 77 153-229 5-94 (260)
282 TIGR01809 Shik-DH-AROM shikima 94.6 0.12 2.5E-06 44.8 6.8 74 153-230 124-201 (282)
283 PRK08690 enoyl-(acyl carrier p 94.6 0.13 2.7E-06 43.9 7.0 35 153-187 5-41 (261)
284 KOG1199 Short-chain alcohol de 94.6 0.16 3.4E-06 39.6 6.6 79 152-230 7-94 (260)
285 PF02558 ApbA: Ketopantoate re 94.6 0.088 1.9E-06 40.7 5.5 94 157-252 1-104 (151)
286 PRK05875 short chain dehydroge 94.6 0.081 1.8E-06 45.4 5.7 35 153-187 6-40 (276)
287 PRK12384 sorbitol-6-phosphate 94.6 0.1 2.2E-06 44.3 6.3 34 154-187 2-35 (259)
288 PRK12809 putative oxidoreducta 94.6 0.16 3.5E-06 49.4 8.2 75 153-230 309-406 (639)
289 PRK05653 fabG 3-ketoacyl-(acyl 94.5 0.12 2.6E-06 43.2 6.7 35 153-187 4-38 (246)
290 PRK06720 hypothetical protein; 94.5 0.17 3.7E-06 40.0 7.0 35 153-187 15-49 (169)
291 PRK06603 enoyl-(acyl carrier p 94.5 0.11 2.5E-06 44.2 6.4 36 152-187 6-43 (260)
292 PRK12938 acetyacetyl-CoA reduc 94.5 0.14 3.1E-06 42.9 7.0 33 153-185 2-34 (246)
293 TIGR02469 CbiT precorrin-6Y C5 94.5 0.32 7E-06 35.8 8.2 92 152-248 18-121 (124)
294 PRK00536 speE spermidine synth 94.5 0.064 1.4E-06 45.5 4.7 95 152-249 71-171 (262)
295 PRK14176 bifunctional 5,10-met 94.5 0.68 1.5E-05 39.8 10.9 95 128-251 143-238 (287)
296 PRK07067 sorbitol dehydrogenas 94.5 0.11 2.3E-06 44.1 6.2 77 153-229 5-90 (257)
297 PRK05884 short chain dehydroge 94.4 0.083 1.8E-06 43.9 5.3 72 156-228 2-78 (223)
298 PRK06482 short chain dehydroge 94.4 0.12 2.6E-06 44.3 6.4 75 155-229 3-86 (276)
299 PRK13944 protein-L-isoaspartat 94.3 0.42 9.1E-06 39.1 9.1 90 152-247 71-171 (205)
300 PRK08642 fabG 3-ketoacyl-(acyl 94.3 0.18 3.9E-06 42.5 7.2 34 153-186 4-37 (253)
301 TIGR01318 gltD_gamma_fam gluta 94.3 0.13 2.8E-06 47.9 6.8 76 152-230 139-237 (467)
302 TIGR00715 precor6x_red precorr 94.2 0.071 1.5E-06 45.2 4.5 73 156-229 2-75 (256)
303 PRK08263 short chain dehydroge 94.2 0.12 2.7E-06 44.3 6.1 76 154-229 3-87 (275)
304 PRK07832 short chain dehydroge 94.2 0.18 3.8E-06 43.3 7.1 32 156-187 2-33 (272)
305 PRK14190 bifunctional 5,10-met 94.2 0.62 1.3E-05 40.0 10.1 96 128-252 137-233 (284)
306 PRK07792 fabG 3-ketoacyl-(acyl 94.2 0.17 3.6E-06 44.3 7.0 34 153-186 11-44 (306)
307 PLN00141 Tic62-NAD(P)-related 94.2 0.19 4.1E-06 42.5 7.1 76 153-229 16-95 (251)
308 PF01118 Semialdhyde_dh: Semia 94.2 0.099 2.2E-06 38.8 4.7 91 156-252 1-100 (121)
309 PRK06997 enoyl-(acyl carrier p 94.1 0.14 3.1E-06 43.5 6.3 77 153-229 5-94 (260)
310 PLN02653 GDP-mannose 4,6-dehyd 94.1 0.12 2.5E-06 46.0 5.9 35 153-187 5-39 (340)
311 PLN02986 cinnamyl-alcohol dehy 94.1 0.23 5E-06 43.7 7.7 36 152-187 3-38 (322)
312 PRK07074 short chain dehydroge 94.1 0.13 2.8E-06 43.5 5.9 34 154-187 2-35 (257)
313 PRK07231 fabG 3-ketoacyl-(acyl 94.0 0.13 2.9E-06 43.2 5.9 35 153-187 4-38 (251)
314 COG1648 CysG Siroheme synthase 94.0 0.15 3.3E-06 41.8 5.8 93 153-253 11-107 (210)
315 PF05368 NmrA: NmrA-like famil 94.0 0.1 2.2E-06 43.6 5.1 70 157-229 1-74 (233)
316 PLN02989 cinnamyl-alcohol dehy 94.0 0.21 4.6E-06 44.0 7.2 35 153-187 4-38 (325)
317 PRK06484 short chain dehydroge 94.0 0.14 3E-06 48.5 6.4 78 152-229 267-353 (520)
318 PRK05854 short chain dehydroge 94.0 0.13 2.9E-06 45.1 5.8 35 153-187 13-47 (313)
319 PRK13656 trans-2-enoyl-CoA red 93.9 0.39 8.5E-06 43.0 8.7 33 152-185 39-73 (398)
320 PRK12936 3-ketoacyl-(acyl-carr 93.9 0.17 3.6E-06 42.4 6.3 77 153-229 5-90 (245)
321 PRK07984 enoyl-(acyl carrier p 93.9 0.29 6.3E-06 41.8 7.8 35 153-187 5-41 (262)
322 TIGR02632 RhaD_aldol-ADH rhamn 93.9 0.2 4.3E-06 49.0 7.5 35 153-187 413-447 (676)
323 PRK07097 gluconate 5-dehydroge 93.9 0.17 3.8E-06 43.1 6.4 35 153-187 9-43 (265)
324 PRK06701 short chain dehydroge 93.9 0.21 4.5E-06 43.4 6.9 36 152-187 44-79 (290)
325 cd01075 NAD_bind_Leu_Phe_Val_D 93.9 1.4 3.1E-05 35.8 11.4 79 152-240 26-107 (200)
326 PRK05650 short chain dehydroge 93.9 0.18 4E-06 43.1 6.5 32 156-187 2-33 (270)
327 PRK10538 malonic semialdehyde 93.9 0.15 3.2E-06 43.0 5.9 74 156-229 2-84 (248)
328 PRK14194 bifunctional 5,10-met 93.8 1.1 2.3E-05 39.0 10.8 94 128-251 138-233 (301)
329 PRK14172 bifunctional 5,10-met 93.8 1.1 2.3E-05 38.4 10.8 96 128-252 137-233 (278)
330 PRK08589 short chain dehydroge 93.8 0.15 3.3E-06 43.7 5.9 37 153-189 5-41 (272)
331 PRK08220 2,3-dihydroxybenzoate 93.8 0.18 3.9E-06 42.5 6.3 36 153-188 7-42 (252)
332 PRK05447 1-deoxy-D-xylulose 5- 93.8 0.2 4.3E-06 44.8 6.5 93 155-247 2-120 (385)
333 PRK12549 shikimate 5-dehydroge 93.8 0.64 1.4E-05 40.2 9.6 90 153-249 126-227 (284)
334 PLN02780 ketoreductase/ oxidor 93.8 0.13 2.9E-06 45.3 5.6 35 153-187 52-86 (320)
335 TIGR01472 gmd GDP-mannose 4,6- 93.8 0.17 3.7E-06 45.0 6.3 33 155-187 1-33 (343)
336 PRK07062 short chain dehydroge 93.7 0.16 3.5E-06 43.2 5.9 35 153-187 7-41 (265)
337 TIGR02197 heptose_epim ADP-L-g 93.7 0.11 2.5E-06 45.3 5.0 73 157-229 1-76 (314)
338 PRK06077 fabG 3-ketoacyl-(acyl 93.7 0.22 4.7E-06 41.9 6.6 34 153-186 5-38 (252)
339 PRK13243 glyoxylate reductase; 93.7 0.2 4.3E-06 44.4 6.4 88 153-251 149-242 (333)
340 cd01079 NAD_bind_m-THF_DH NAD 93.7 1.2 2.6E-05 35.8 10.1 96 152-252 60-159 (197)
341 PRK06398 aldose dehydrogenase; 93.6 0.15 3.2E-06 43.3 5.5 35 153-187 5-39 (258)
342 COG1748 LYS9 Saccharopine dehy 93.6 0.15 3.1E-06 45.8 5.4 91 155-249 2-99 (389)
343 PF01262 AlaDh_PNT_C: Alanine 93.6 0.14 3E-06 40.5 4.9 98 153-253 19-143 (168)
344 PRK14177 bifunctional 5,10-met 93.6 1.3 2.7E-05 38.1 10.8 96 128-252 138-234 (284)
345 PRK08219 short chain dehydroge 93.6 0.18 4E-06 41.6 5.8 72 155-229 4-81 (227)
346 PRK08594 enoyl-(acyl carrier p 93.6 0.23 5E-06 42.2 6.5 35 153-187 6-42 (257)
347 PRK07985 oxidoreductase; Provi 93.6 0.17 3.6E-06 44.0 5.7 34 153-186 48-81 (294)
348 PRK09186 flagellin modificatio 93.5 0.19 4.1E-06 42.5 5.9 35 153-187 3-37 (256)
349 PRK07576 short chain dehydroge 93.5 0.16 3.4E-06 43.4 5.5 35 153-187 8-42 (264)
350 PF02254 TrkA_N: TrkA-N domain 93.5 0.39 8.6E-06 35.1 7.0 93 157-251 1-98 (116)
351 PRK12823 benD 1,6-dihydroxycyc 93.5 0.19 4.2E-06 42.6 6.0 36 153-188 7-42 (260)
352 PF02670 DXP_reductoisom: 1-de 93.5 0.094 2E-06 39.2 3.5 89 157-245 1-117 (129)
353 PRK14167 bifunctional 5,10-met 93.4 0.88 1.9E-05 39.3 9.6 97 128-252 136-236 (297)
354 PRK07523 gluconate 5-dehydroge 93.4 0.17 3.7E-06 42.8 5.4 35 153-187 9-43 (255)
355 TIGR00438 rrmJ cell division p 93.3 0.34 7.3E-06 39.0 6.8 94 152-249 31-146 (188)
356 PRK14179 bifunctional 5,10-met 93.3 0.89 1.9E-05 39.1 9.4 95 128-252 137-233 (284)
357 PRK12769 putative oxidoreducta 93.3 0.37 8.1E-06 47.0 8.2 75 152-229 325-422 (654)
358 PRK07035 short chain dehydroge 93.3 0.21 4.5E-06 42.1 5.8 35 153-187 7-41 (252)
359 TIGR01532 E4PD_g-proteo D-eryt 93.3 0.36 7.7E-06 42.5 7.3 95 156-251 1-122 (325)
360 PRK14169 bifunctional 5,10-met 93.3 1.5 3.3E-05 37.6 10.8 96 128-252 135-231 (282)
361 KOG4022 Dihydropteridine reduc 93.3 0.31 6.8E-06 37.6 5.9 71 155-229 4-82 (236)
362 PRK08213 gluconate 5-dehydroge 93.2 0.21 4.6E-06 42.3 5.8 35 153-187 11-45 (259)
363 PLN02695 GDP-D-mannose-3',5'-e 93.2 0.3 6.5E-06 44.0 7.0 36 152-187 19-54 (370)
364 PRK14171 bifunctional 5,10-met 93.2 1.1 2.3E-05 38.6 9.8 95 128-251 138-233 (288)
365 PRK12746 short chain dehydroge 93.2 0.3 6.5E-06 41.2 6.6 33 153-185 5-37 (254)
366 PRK13581 D-3-phosphoglycerate 93.2 0.27 5.9E-06 46.5 6.8 86 153-249 139-230 (526)
367 KOG0725 Reductases with broad 93.1 0.24 5.1E-06 42.5 5.8 36 152-187 6-41 (270)
368 PRK08703 short chain dehydroge 93.1 0.2 4.3E-06 41.9 5.3 35 153-187 5-39 (239)
369 PRK08416 7-alpha-hydroxysteroi 93.1 0.24 5.3E-06 42.0 6.0 34 153-186 7-40 (260)
370 PRK01581 speE spermidine synth 93.1 0.35 7.5E-06 43.0 6.8 96 152-250 149-269 (374)
371 PRK07856 short chain dehydroge 93.1 0.2 4.3E-06 42.3 5.3 35 153-187 5-39 (252)
372 PLN00016 RNA-binding protein; 93.1 0.26 5.7E-06 44.5 6.4 94 153-249 51-164 (378)
373 PRK06172 short chain dehydroge 93.1 0.24 5.1E-06 41.8 5.8 35 153-187 6-40 (253)
374 PRK14180 bifunctional 5,10-met 93.0 1.8 3.8E-05 37.2 10.8 96 128-252 137-233 (282)
375 PRK14178 bifunctional 5,10-met 93.0 1.3 2.8E-05 37.9 10.0 95 128-251 131-226 (279)
376 PRK07574 formate dehydrogenase 93.0 0.47 1E-05 42.8 7.7 90 153-252 191-287 (385)
377 PRK07890 short chain dehydroge 92.9 0.21 4.6E-06 42.2 5.3 35 153-187 4-38 (258)
378 PRK06101 short chain dehydroge 92.9 0.24 5.3E-06 41.5 5.7 39 155-193 2-41 (240)
379 PRK06487 glycerate dehydrogena 92.9 0.19 4.1E-06 44.2 5.1 83 153-251 147-235 (317)
380 PRK08226 short chain dehydroge 92.9 0.25 5.5E-06 41.9 5.8 36 153-188 5-40 (263)
381 PLN02928 oxidoreductase family 92.9 0.58 1.3E-05 41.7 8.2 93 153-251 158-264 (347)
382 PRK14173 bifunctional 5,10-met 92.9 1.8 3.8E-05 37.3 10.7 96 128-252 134-230 (287)
383 PRK08303 short chain dehydroge 92.9 0.21 4.5E-06 43.7 5.3 35 153-187 7-41 (305)
384 PLN02214 cinnamoyl-CoA reducta 92.9 0.37 8.1E-06 42.9 7.0 36 152-187 8-43 (342)
385 PRK06128 oxidoreductase; Provi 92.9 0.26 5.7E-06 42.9 5.9 34 153-186 54-87 (300)
386 PRK14166 bifunctional 5,10-met 92.9 1.9 4.1E-05 37.0 10.8 96 128-252 136-232 (282)
387 PRK06125 short chain dehydroge 92.9 0.26 5.5E-06 41.8 5.8 35 153-187 6-40 (259)
388 PLN02896 cinnamyl-alcohol dehy 92.9 0.4 8.6E-06 42.9 7.2 36 152-187 8-43 (353)
389 PRK14187 bifunctional 5,10-met 92.9 1.8 3.8E-05 37.4 10.6 96 128-252 139-235 (294)
390 PRK06114 short chain dehydroge 92.9 0.32 6.9E-06 41.1 6.3 35 153-187 7-41 (254)
391 PRK05876 short chain dehydroge 92.8 0.22 4.8E-06 42.8 5.3 35 153-187 5-39 (275)
392 PRK07502 cyclohexadienyl dehyd 92.8 0.33 7.2E-06 42.5 6.5 91 154-252 6-103 (307)
393 PLN02366 spermidine synthase 92.8 0.32 6.8E-06 42.5 6.2 96 152-249 90-206 (308)
394 PRK08655 prephenate dehydrogen 92.8 0.27 5.7E-06 45.4 6.0 86 156-250 2-93 (437)
395 PRK14967 putative methyltransf 92.8 0.35 7.7E-06 40.1 6.3 68 152-227 35-109 (223)
396 PRK08317 hypothetical protein; 92.8 0.48 1E-05 39.5 7.2 99 142-249 13-124 (241)
397 PRK14170 bifunctional 5,10-met 92.7 1.9 4.2E-05 37.0 10.7 96 128-252 136-232 (284)
398 PRK11207 tellurite resistance 92.7 0.15 3.3E-06 41.4 4.0 91 152-248 29-133 (197)
399 PF10727 Rossmann-like: Rossma 92.7 0.13 2.9E-06 38.4 3.3 78 154-241 10-90 (127)
400 PRK08643 acetoin reductase; Va 92.7 0.29 6.3E-06 41.4 5.8 34 154-187 2-35 (256)
401 PRK14181 bifunctional 5,10-met 92.7 1.4 3E-05 38.0 9.7 96 128-252 132-232 (287)
402 PRK07370 enoyl-(acyl carrier p 92.6 0.43 9.3E-06 40.5 6.8 33 153-185 5-39 (258)
403 PLN02968 Probable N-acetyl-gam 92.6 0.18 3.9E-06 45.5 4.6 95 155-250 39-135 (381)
404 PRK08085 gluconate 5-dehydroge 92.6 0.24 5.3E-06 41.8 5.3 35 153-187 8-42 (254)
405 PRK14106 murD UDP-N-acetylmura 92.6 0.43 9.2E-06 44.3 7.3 70 153-230 4-79 (450)
406 PRK09242 tropinone reductase; 92.6 0.3 6.4E-06 41.4 5.8 35 153-187 8-42 (257)
407 PRK12749 quinate/shikimate deh 92.6 0.93 2E-05 39.3 8.8 34 153-187 123-157 (288)
408 PF01370 Epimerase: NAD depend 92.5 0.2 4.4E-06 41.6 4.7 72 157-229 1-75 (236)
409 PF00106 adh_short: short chai 92.5 0.34 7.4E-06 37.8 5.7 33 155-187 1-34 (167)
410 PRK10637 cysG siroheme synthas 92.5 0.78 1.7E-05 42.6 8.8 93 153-252 11-106 (457)
411 PRK07889 enoyl-(acyl carrier p 92.5 0.31 6.6E-06 41.4 5.8 35 153-187 6-42 (256)
412 PLN02516 methylenetetrahydrofo 92.5 2.2 4.7E-05 37.0 10.7 96 128-252 146-242 (299)
413 COG1179 Dinucleotide-utilizing 92.5 0.44 9.6E-06 39.4 6.2 98 153-251 29-155 (263)
414 PRK08945 putative oxoacyl-(acy 92.5 0.26 5.7E-06 41.4 5.2 36 152-187 10-45 (247)
415 PF06325 PrmA: Ribosomal prote 92.4 0.057 1.2E-06 46.7 1.2 141 88-251 108-261 (295)
416 PRK00811 spermidine synthase; 92.4 0.29 6.3E-06 42.3 5.5 92 152-248 75-190 (283)
417 PLN02730 enoyl-[acyl-carrier-p 92.4 0.35 7.6E-06 42.2 6.0 31 153-183 8-40 (303)
418 PRK12743 oxidoreductase; Provi 92.4 0.37 7.9E-06 40.8 6.1 33 154-186 2-34 (256)
419 PRK01438 murD UDP-N-acetylmura 92.3 0.64 1.4E-05 43.6 8.1 70 152-230 14-89 (480)
420 PRK06914 short chain dehydroge 92.3 0.3 6.5E-06 42.0 5.4 34 154-187 3-36 (280)
421 TIGR03589 PseB UDP-N-acetylglu 92.3 0.46 1E-05 41.9 6.7 35 153-187 3-39 (324)
422 PRK12826 3-ketoacyl-(acyl-carr 92.2 0.28 6E-06 41.2 5.1 35 153-187 5-39 (251)
423 PRK07024 short chain dehydroge 92.2 0.35 7.7E-06 40.9 5.8 34 154-187 2-35 (257)
424 PLN00198 anthocyanidin reducta 92.2 0.56 1.2E-05 41.6 7.3 35 153-187 8-42 (338)
425 PRK00436 argC N-acetyl-gamma-g 92.2 0.34 7.4E-06 43.1 5.8 92 155-251 3-101 (343)
426 PRK14186 bifunctional 5,10-met 92.2 2.5 5.5E-05 36.6 10.8 96 128-252 137-233 (297)
427 TIGR01777 yfcH conserved hypot 92.2 0.22 4.7E-06 43.0 4.5 66 157-229 1-67 (292)
428 PLN03139 formate dehydrogenase 92.2 0.36 7.9E-06 43.5 6.0 89 153-251 198-293 (386)
429 PLN02897 tetrahydrofolate dehy 92.2 2.2 4.8E-05 37.6 10.5 95 129-252 194-289 (345)
430 TIGR01963 PHB_DH 3-hydroxybuty 92.1 0.32 6.8E-06 41.0 5.4 33 155-187 2-34 (255)
431 TIGR01214 rmlD dTDP-4-dehydror 92.1 0.25 5.5E-06 42.6 4.8 32 156-187 1-32 (287)
432 PRK06171 sorbitol-6-phosphate 92.1 0.33 7.2E-06 41.3 5.5 35 153-187 8-42 (266)
433 PRK06181 short chain dehydroge 92.1 0.3 6.6E-06 41.4 5.3 33 155-187 2-34 (263)
434 PRK15181 Vi polysaccharide bio 92.1 0.27 5.9E-06 43.8 5.1 47 135-187 2-48 (348)
435 PRK14874 aspartate-semialdehyd 92.1 0.3 6.5E-06 43.3 5.3 88 155-249 2-94 (334)
436 PRK14184 bifunctional 5,10-met 92.1 2.4 5.2E-05 36.5 10.5 96 128-252 136-236 (286)
437 PLN02240 UDP-glucose 4-epimera 92.1 0.45 9.9E-06 42.4 6.6 34 153-186 4-37 (352)
438 PRK07402 precorrin-6B methylas 92.0 1.2 2.5E-05 36.2 8.4 95 152-251 39-144 (196)
439 KOG1502 Flavonol reductase/cin 92.0 0.7 1.5E-05 40.4 7.2 45 153-197 5-53 (327)
440 KOG1208 Dehydrogenases with di 92.0 0.37 8E-06 42.2 5.7 37 152-188 33-69 (314)
441 PRK07774 short chain dehydroge 92.0 0.34 7.5E-06 40.7 5.4 35 153-187 5-39 (250)
442 PRK08936 glucose-1-dehydrogena 92.0 0.44 9.6E-06 40.4 6.2 35 153-187 6-40 (261)
443 PRK05855 short chain dehydroge 92.0 0.31 6.6E-06 46.7 5.7 36 152-187 313-348 (582)
444 COG0569 TrkA K+ transport syst 92.0 0.32 7E-06 40.5 5.0 79 156-236 2-83 (225)
445 TIGR03466 HpnA hopanoid-associ 92.0 0.28 6.1E-06 43.1 5.0 71 156-229 2-74 (328)
446 cd05211 NAD_bind_Glu_Leu_Phe_V 91.9 2.3 4.9E-05 35.2 9.9 34 152-186 21-54 (217)
447 PRK15469 ghrA bifunctional gly 91.9 0.54 1.2E-05 41.2 6.6 90 152-252 134-229 (312)
448 PLN02616 tetrahydrofolate dehy 91.8 2.5 5.4E-05 37.5 10.5 95 129-252 211-306 (364)
449 TIGR01179 galE UDP-glucose-4-e 91.8 0.36 7.8E-06 42.3 5.6 31 156-186 1-31 (328)
450 cd05311 NAD_bind_2_malic_enz N 91.8 2.5 5.4E-05 35.2 10.2 89 153-251 24-130 (226)
451 PRK07666 fabG 3-ketoacyl-(acyl 91.8 0.38 8.3E-06 40.2 5.4 35 153-187 6-40 (239)
452 PLN03075 nicotianamine synthas 91.8 0.38 8.2E-06 41.6 5.3 96 152-249 122-233 (296)
453 PRK06124 gluconate 5-dehydroge 91.7 0.38 8.2E-06 40.7 5.4 35 153-187 10-44 (256)
454 PRK11036 putative S-adenosyl-L 91.7 0.36 7.9E-06 41.0 5.3 91 153-249 44-149 (255)
455 PRK05557 fabG 3-ketoacyl-(acyl 91.7 0.39 8.4E-06 40.2 5.4 34 153-186 4-37 (248)
456 PRK15409 bifunctional glyoxyla 91.6 0.55 1.2E-05 41.4 6.4 88 153-251 144-238 (323)
457 PRK08251 short chain dehydroge 91.6 0.44 9.6E-06 40.0 5.7 34 154-187 2-35 (248)
458 PRK00312 pcm protein-L-isoaspa 91.6 1.6 3.4E-05 35.9 8.8 92 152-248 77-174 (212)
459 COG0334 GdhA Glutamate dehydro 91.6 1.4 3E-05 39.7 8.7 56 124-186 183-238 (411)
460 PRK09135 pteridine reductase; 91.6 0.39 8.5E-06 40.2 5.3 35 153-187 5-39 (249)
461 PRK12548 shikimate 5-dehydroge 91.6 1.3 2.8E-05 38.5 8.5 34 153-187 125-159 (289)
462 PF12242 Eno-Rase_NADH_b: NAD( 91.6 0.62 1.4E-05 31.0 4.9 34 152-185 37-71 (78)
463 COG1052 LdhA Lactate dehydroge 91.5 0.46 9.9E-06 41.8 5.7 89 153-252 145-239 (324)
464 PRK07201 short chain dehydroge 91.5 0.42 9E-06 46.7 6.1 35 153-187 370-404 (657)
465 PRK07578 short chain dehydroge 91.5 0.52 1.1E-05 38.2 5.8 31 156-187 2-32 (199)
466 PLN02166 dTDP-glucose 4,6-dehy 91.5 0.86 1.9E-05 42.1 7.8 36 152-187 118-153 (436)
467 PLN02583 cinnamoyl-CoA reducta 91.5 0.42 9E-06 41.6 5.5 36 152-187 4-39 (297)
468 COG0373 HemA Glutamyl-tRNA red 91.5 1.2 2.5E-05 40.5 8.2 92 153-252 177-277 (414)
469 PLN02520 bifunctional 3-dehydr 91.4 1.5 3.1E-05 41.7 9.4 92 153-251 378-477 (529)
470 PRK12747 short chain dehydroge 91.4 0.52 1.1E-05 39.7 6.0 33 153-185 3-35 (252)
471 TIGR01181 dTDP_gluc_dehyt dTDP 91.4 0.4 8.6E-06 41.8 5.4 31 156-186 1-33 (317)
472 PRK14982 acyl-ACP reductase; P 91.4 0.52 1.1E-05 41.7 5.9 91 153-252 154-249 (340)
473 PRK14027 quinate/shikimate deh 91.4 1.5 3.2E-05 38.0 8.6 34 153-187 126-160 (283)
474 cd05191 NAD_bind_amino_acid_DH 91.4 1.8 4E-05 29.7 7.7 34 152-186 21-55 (86)
475 TIGR01327 PGDH D-3-phosphoglyc 91.4 0.73 1.6E-05 43.6 7.3 87 153-249 137-229 (525)
476 COG0031 CysK Cysteine synthase 91.4 1.5 3.2E-05 37.9 8.5 53 152-205 60-116 (300)
477 PRK05579 bifunctional phosphop 91.4 0.13 2.8E-06 46.7 2.2 73 153-229 187-277 (399)
478 PRK14182 bifunctional 5,10-met 91.4 3.4 7.4E-05 35.5 10.6 96 128-252 136-232 (282)
479 COG0686 Ald Alanine dehydrogen 91.3 0.37 7.9E-06 41.5 4.6 211 33-250 29-269 (371)
480 PLN02427 UDP-apiose/xylose syn 91.3 0.75 1.6E-05 41.7 7.1 35 153-187 13-48 (386)
481 smart00846 Gp_dh_N Glyceraldeh 91.2 1.2 2.6E-05 34.4 7.1 96 156-252 2-121 (149)
482 PRK10258 biotin biosynthesis p 91.2 6.5 0.00014 33.2 12.4 91 152-249 41-140 (251)
483 PRK07102 short chain dehydroge 91.2 0.43 9.2E-06 40.0 5.2 33 155-187 2-34 (243)
484 PLN02476 O-methyltransferase 91.2 0.57 1.2E-05 40.2 5.8 94 152-247 117-226 (278)
485 PRK07791 short chain dehydroge 91.2 0.45 9.7E-06 41.2 5.4 35 152-186 4-38 (286)
486 PRK06924 short chain dehydroge 91.2 0.55 1.2E-05 39.5 5.8 34 155-188 2-35 (251)
487 PRK06113 7-alpha-hydroxysteroi 91.1 0.47 1E-05 40.1 5.4 35 153-187 10-44 (255)
488 TIGR00477 tehB tellurite resis 91.1 0.22 4.8E-06 40.4 3.2 90 152-248 29-132 (195)
489 PRK14193 bifunctional 5,10-met 91.1 3.9 8.4E-05 35.2 10.7 95 129-252 138-235 (284)
490 PF08241 Methyltransf_11: Meth 91.0 0.13 2.9E-06 35.7 1.6 82 164-246 5-94 (95)
491 PRK12937 short chain dehydroge 91.0 0.48 1E-05 39.7 5.2 35 152-186 3-37 (245)
492 PF03446 NAD_binding_2: NAD bi 90.9 0.79 1.7E-05 35.9 6.1 89 156-254 3-99 (163)
493 PRK11579 putative oxidoreducta 90.9 4 8.6E-05 36.4 11.3 132 156-295 6-143 (346)
494 PRK12935 acetoacetyl-CoA reduc 90.9 0.66 1.4E-05 38.9 6.0 34 153-186 5-38 (247)
495 PRK06550 fabG 3-ketoacyl-(acyl 90.9 0.48 1E-05 39.4 5.1 35 153-187 4-38 (235)
496 PF01596 Methyltransf_3: O-met 90.8 0.12 2.7E-06 42.2 1.4 95 152-248 44-154 (205)
497 PRK10217 dTDP-glucose 4,6-dehy 90.8 0.57 1.2E-05 41.8 5.9 31 155-185 2-32 (355)
498 cd01076 NAD_bind_1_Glu_DH NAD( 90.8 3.1 6.6E-05 34.7 9.7 33 153-186 30-62 (227)
499 TIGR03840 TMPT_Se_Te thiopurin 90.8 0.93 2E-05 37.3 6.6 95 152-249 33-152 (213)
500 PRK14103 trans-aconitate 2-met 90.7 1.2 2.5E-05 37.9 7.4 89 152-248 28-125 (255)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.5e-59 Score=397.25 Aligned_cols=306 Identities=29% Similarity=0.428 Sum_probs=275.7
Q ss_pred ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314 4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS 83 (327)
Q Consensus 4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 83 (327)
+++|||+++.+++++ +++++.+.|+|.++||+|+|+++|+|++|+|.++|.++.. .+|.+||||.+|+|+++|+
T Consensus 1 ~~~mkA~~~~~~~~p---l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~---~~P~ipGHEivG~V~~vG~ 74 (339)
T COG1064 1 MMTMKAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP---KLPLIPGHEIVGTVVEVGE 74 (339)
T ss_pred CcceEEEEEccCCCC---ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC---CCCccCCcceEEEEEEecC
Confidence 578999999999987 9999999999999999999999999999999999998742 5899999999999999999
Q ss_pred CCCCCCCCCEEEE-Ec---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHH
Q 020314 84 EVKNFKVGDKVVA-VL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLT 135 (327)
Q Consensus 84 ~~~~~~~Gd~V~~-~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 135 (327)
+|+.|++||||.. +. .+|+|+||+++++.+++++|+++++++||.+.|++.|
T Consensus 75 ~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT 154 (339)
T COG1064 75 GVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGIT 154 (339)
T ss_pred CCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeee
Confidence 9999999999977 33 7899999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC-ccccc
Q 020314 136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD-GAALK 213 (327)
Q Consensus 136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~-~~~~~ 213 (327)
.|++|+ ..++ ++|++|+|+| .|++|.+++|+|+++|++|++++++ +|++.+++||++.+++.++.+ .+..+
T Consensus 155 ~y~alk-~~~~-----~pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~ 227 (339)
T COG1064 155 TYRALK-KANV-----KPGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVK 227 (339)
T ss_pred Eeeehh-hcCC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhH
Confidence 999994 5777 9999999999 6799999999999999999999955 789999999999999977433 22222
Q ss_pred CCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc-hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314 214 SPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG 292 (327)
Q Consensus 214 ~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 292 (327)
. .+|+++|+++...++.+++.|+++|+++.+|... .....++...+.++++.+.+ +....+.++++++++.++|
T Consensus 228 ~----~~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~G-S~~g~~~d~~e~l~f~~~g 302 (339)
T COG1064 228 E----IADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVG-SLVGTRADLEEALDFAAEG 302 (339)
T ss_pred h----hCcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEE-EecCCHHHHHHHHHHHHhC
Confidence 1 2999999999555999999999999999999874 55455667778889999998 6667899999999999999
Q ss_pred ceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 293 KLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 293 ~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++++.+.+.++++++++|++.|++++..||.||++
T Consensus 303 ~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 303 KIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred CceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence 99999878999999999999999999999999864
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=8.8e-55 Score=379.68 Aligned_cols=313 Identities=36% Similarity=0.545 Sum_probs=270.2
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||++++.+++.+ +.+++++.+.|.|.++||+|||.++|+|+.|.+.+.|..++ ...+|.++|.|++|+|+++|++++
T Consensus 1 mka~~~~~~g~~-~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~--~~~~P~i~G~d~aG~V~avG~~V~ 77 (326)
T COG0604 1 MKAVVVEEFGGP-EVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPP--VRPLPFIPGSEAAGVVVAVGSGVT 77 (326)
T ss_pred CeEEEEeccCCC-ceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCC--CCCCCCcccceeEEEEEEeCCCCC
Confidence 799999999984 44999999999999999999999999999999999997321 236899999999999999999999
Q ss_pred CCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCC
Q 020314 87 NFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS 163 (327)
Q Consensus 87 ~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~ 163 (327)
.+++||||+... .+|+|+||..+|++.++++|+++|+++||+++..++|||+++.+..++ ++|++|||+||+
T Consensus 78 ~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l-----~~g~~VLV~gaa 152 (326)
T COG0604 78 GFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGL-----KPGETVLVHGAA 152 (326)
T ss_pred CcCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEecCC
Confidence 999999999986 689999999999999999999999999999999999999999988888 889999999999
Q ss_pred ChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccC
Q 020314 164 GAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLG 240 (327)
Q Consensus 164 g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~ 240 (327)
|++|.+++|+|+++|+++++++ ++++.++++++|+++++++.+.+ ..+.+.++++++|+|||++|++.+..++++|+
T Consensus 153 GgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~ 232 (326)
T COG0604 153 GGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA 232 (326)
T ss_pred chHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence 9999999999999997666655 56777799999999999998876 34556788889999999999999999999999
Q ss_pred CCcEEEeecCCc-hhHHHHhhhhccccceeeEEEEeCCC-----HHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314 241 TTGKVIDFNPSP-RVLLTFAWKKLTFSKKQLVPFSVSPK-----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS 314 (327)
Q Consensus 241 ~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~ 314 (327)
++|+++.+|... .....+....+..+.+...+.+.... .+.++++.+++++|.+++.+..+|++++..++....
T Consensus 233 ~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~ 312 (326)
T COG0604 233 PGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHL 312 (326)
T ss_pred cCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHH
Confidence 999999999876 33333444455555666666544434 567888999999999999999999999955555444
Q ss_pred hc-CCCCccEEEeC
Q 020314 315 IS-GRATGKIIVEP 327 (327)
Q Consensus 315 ~~-~~~~gkvvv~~ 327 (327)
.. ++..||+|+++
T Consensus 313 ~~~~~~~GKvvl~~ 326 (326)
T COG0604 313 LLERRTTGKVVLKV 326 (326)
T ss_pred HcccCCcceEEEeC
Confidence 43 58889999975
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.7e-53 Score=337.45 Aligned_cols=317 Identities=30% Similarity=0.426 Sum_probs=284.3
Q ss_pred CCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314 2 AGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81 (327)
Q Consensus 2 ~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v 81 (327)
++|+..|.++++++|. .+.+++++.+.|+|+|+|.+||..++|+|..|...+.|.+. +...|.+||.|.+|+|+++
T Consensus 4 ~~p~~~k~i~v~e~Gg-ydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAv 79 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGG-YDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAV 79 (336)
T ss_pred CCCchheEEEEeccCC-cceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEe
Confidence 4789999999999996 79999999999999999999999999999999999999984 3478999999999999999
Q ss_pred CCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314 82 GSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA 161 (327)
Q Consensus 82 G~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g 161 (327)
|++++++++||||+.....|.|+++..+|...++++|+.+++.+||++...++|||..+.+..++ ++|++||||.
T Consensus 80 G~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~v-----kpGhtVlvha 154 (336)
T KOG1197|consen 80 GEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNV-----KPGHTVLVHA 154 (336)
T ss_pred cCCccccccccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEEe
Confidence 99999999999999988999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccc
Q 020314 162 ASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPN 238 (327)
Q Consensus 162 ~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 238 (327)
|+|++|++++|+++..|++++++++ .+|++.+++.|+++.|+++.++ ..+.+.++++|+|+++|++|.+.+..++.+
T Consensus 155 AAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~ 234 (336)
T KOG1197|consen 155 AAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAA 234 (336)
T ss_pred ccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHH
Confidence 9999999999999999999999885 4899999999999999999888 456677899999999999999999999999
Q ss_pred cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe---CCCHHH----HHHHHHHHHCCceeEecceeeccccHHHHH
Q 020314 239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV---SPKGEN----LDFLVKLVKEGKLKTVIDSKHSLSKAEDAW 311 (327)
Q Consensus 239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~ 311 (327)
|++.|.+|++|..++...++.+..++-+.+.+..-+. ...+.. ..+++.++.+|.|++.|.++||++++.+|+
T Consensus 235 Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~ 314 (336)
T KOG1197|consen 235 LKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAH 314 (336)
T ss_pred hccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHH
Confidence 9999999999988776555555555555544332221 122333 357888999999999999999999999999
Q ss_pred HHHhcCCCCccEEEeC
Q 020314 312 AKSISGRATGKIIVEP 327 (327)
Q Consensus 312 ~~~~~~~~~gkvvv~~ 327 (327)
.++++++..||+++.+
T Consensus 315 ~diesrktvGkvlLlp 330 (336)
T KOG1197|consen 315 ADIESRKTVGKVLLLP 330 (336)
T ss_pred HHHHhhhccceEEEeC
Confidence 9999999999999854
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.7e-51 Score=336.10 Aligned_cols=312 Identities=26% Similarity=0.384 Sum_probs=267.7
Q ss_pred CCCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314 1 MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80 (327)
Q Consensus 1 m~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~ 80 (327)
|++|.++++|.+..++. ...+++.+++.|++.++||+|++++||||++|+|.+.|.++. ..+|.++|||.+|+|++
T Consensus 4 ~~~p~k~~g~~~~~~~G-~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~Vvk 79 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSG-VLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVK 79 (360)
T ss_pred ccCchhhEEEEEECCCC-CCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEE
Confidence 45899999999999876 455777999999999999999999999999999999999864 37899999999999999
Q ss_pred cCCCCCCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhh
Q 020314 81 LGSEVKNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAE 125 (327)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~ 125 (327)
+|++|+.|++||||-.-. .+|+|++|+++++.++++||++++.++
T Consensus 80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~ 159 (360)
T KOG0023|consen 80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLAS 159 (360)
T ss_pred ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhh
Confidence 999999999999983322 667799999999999999999999999
Q ss_pred hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEe
Q 020314 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGADEVLD 203 (327)
Q Consensus 126 aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~ 203 (327)
||.+.|++.|+|.+| ...++ ++|+++-|.| .|++|.+++|+||++|++|++++++ +|.+..+.||++..++
T Consensus 160 aAPlLCaGITvYspL-k~~g~-----~pG~~vgI~G-lGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~ 232 (360)
T KOG0023|consen 160 AAPLLCAGITVYSPL-KRSGL-----GPGKWVGIVG-LGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVD 232 (360)
T ss_pred ccchhhcceEEeehh-HHcCC-----CCCcEEEEec-CcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEE
Confidence 999999999999999 56677 8999999999 5669999999999999999999965 4566778899998888
Q ss_pred CC-CCC-cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHH
Q 020314 204 YK-TPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGEN 281 (327)
Q Consensus 204 ~~-~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (327)
.. +.+ .+....+-+.++|-+.+. ...++..++++++++|++|++|.+.. ...+....+.++++.+.+ +.-..+.+
T Consensus 233 ~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~G-S~vG~~ke 309 (360)
T KOG0023|consen 233 STEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKG-SIVGSRKE 309 (360)
T ss_pred ecCCHHHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEe-eccccHHH
Confidence 77 444 222222323345555544 34458999999999999999998876 566667777888888888 66678899
Q ss_pred HHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 282 LDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 282 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.++++++.+++.+++.+. ..+++++++|+++|++++..+|.|+++
T Consensus 310 t~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 310 TQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred HHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence 999999999999998885 899999999999999999999999864
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.1e-50 Score=330.80 Aligned_cols=308 Identities=23% Similarity=0.269 Sum_probs=262.5
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS 83 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 83 (327)
.+|+|+++.+.++ +++++.+.|++ .|+||+|++.++|||++|+|.+........--+.|+++|||.+|+|.++|+
T Consensus 3 ~~~~A~vl~g~~d----i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~ 78 (354)
T KOG0024|consen 3 ADNLALVLRGKGD----IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGD 78 (354)
T ss_pred cccceeEEEccCc----eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcc
Confidence 4689999988776 99999999986 999999999999999999998876543211125799999999999999999
Q ss_pred CCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHH
Q 020314 84 EVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLT 135 (327)
Q Consensus 84 ~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 135 (327)
.|+++++||||+.-+ .+|++++|++.+++.++++|+++|++++|++.. +++
T Consensus 79 ~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP-LsV 157 (354)
T KOG0024|consen 79 EVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP-LSV 157 (354)
T ss_pred cccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccc-hhh
Confidence 999999999997755 679999999999999999999999999998875 789
Q ss_pred HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHHhcCCCEEEeCCCCC-c---
Q 020314 136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVKSLGADEVLDYKTPD-G--- 209 (327)
Q Consensus 136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~-~--- 209 (327)
+|||. +++++ ++|.+|||+| +|++|+.+...||++|+ +|+.++ .+.|++.++++|++.+.+....+ .
T Consensus 158 ~~HAc-r~~~v-----k~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~ 230 (354)
T KOG0024|consen 158 GVHAC-RRAGV-----KKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQEL 230 (354)
T ss_pred hhhhh-hhcCc-----ccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHH
Confidence 99999 78888 9999999999 79999999999999999 777776 67899999999999887665533 1
Q ss_pred -cccc-CCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314 210 -AALK-SPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV 286 (327)
Q Consensus 210 -~~~~-~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
+..+ ..+...+|+.|||+|.+. ++.++..++.+|.++.+|+.... ..++...+..+++++.+. ..+....|..++
T Consensus 231 ~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~-~~fpi~~v~~kE~~~~g~-fry~~~~y~~ai 308 (354)
T KOG0024|consen 231 AELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEE-IQFPIIDVALKEVDLRGS-FRYCNGDYPTAI 308 (354)
T ss_pred HHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCc-cccChhhhhhheeeeeee-eeeccccHHHHH
Confidence 2222 233356999999999766 99999999999999988876543 566777888999999994 445667899999
Q ss_pred HHHHCCcee--EecceeeccccHHHHHHHHhcCCCC-ccEEEe
Q 020314 287 KLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRAT-GKIIVE 326 (327)
Q Consensus 287 ~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~-gkvvv~ 326 (327)
+++++|+++ +++++.|+++++.+||+.+.+++.. -|+++.
T Consensus 309 ~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 309 ELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred HHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence 999999964 6999999999999999999988853 377764
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.8e-49 Score=330.49 Aligned_cols=308 Identities=20% Similarity=0.241 Sum_probs=265.9
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
|++||.++.++++| |+++++++++|+++||+||+.++|+|++|.+.++|..| ..||.++|||.+|+|++||++
T Consensus 1 mk~~aAV~~~~~~P---l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p----~~~P~vLGHEgAGiVe~VG~g 73 (366)
T COG1062 1 MKTRAAVAREAGKP---LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP----EGFPAVLGHEGAGIVEAVGEG 73 (366)
T ss_pred CCceEeeeecCCCC---eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCceecccccccEEEEecCC
Confidence 57899999999998 99999999999999999999999999999999999985 469999999999999999999
Q ss_pred CCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCceee
Q 020314 85 VKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTVA 116 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~~ 116 (327)
|+++++||+|+... ..++|++|.++++.++++
T Consensus 74 Vt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vk 153 (366)
T COG1062 74 VTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVK 153 (366)
T ss_pred ccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEE
Confidence 99999999998765 335999999999999999
Q ss_pred CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHH
Q 020314 117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVK 194 (327)
Q Consensus 117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~ 194 (327)
++++.+++.++++.|..+|.+.+..+.+++ ++|++|.|+| .|++|++++|-|+..|+ ++++++ +++|+++++
T Consensus 154 i~~~~p~~~a~llGCgV~TG~Gav~nta~v-----~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~ 227 (366)
T COG1062 154 IDPDAPLEKACLLGCGVTTGIGAVVNTAKV-----EPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK 227 (366)
T ss_pred CCCCCCccceEEEeeeeccChHHhhhcccC-----CCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH
Confidence 999999999999999999999999899999 9999999999 89999999999999999 888888 678999999
Q ss_pred hcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc-hhHHHHhhhhccccceee
Q 020314 195 SLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLTFSKKQL 270 (327)
Q Consensus 195 ~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~ 270 (327)
++|+++++|..+.. .+.+....++|+|.+|||+|+.. ++++++++.++|+.+.+|... +...+.....+... ..+
T Consensus 228 ~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~ 306 (366)
T COG1062 228 KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVW 306 (366)
T ss_pred hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceE
Confidence 99999999988763 22333333459999999999766 999999999999999998442 22222333333333 667
Q ss_pred EEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 271 VPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 271 ~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++.... ..+.++..++++..+|+|+ .++++.++|+|++|||+.|.+|+.. |-||.+
T Consensus 307 ~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~~ 366 (366)
T COG1062 307 KGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIRF 366 (366)
T ss_pred EEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEecC
Confidence 775442 3467899999999999975 6999999999999999999999987 666643
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.9e-47 Score=343.22 Aligned_cols=308 Identities=22% Similarity=0.294 Sum_probs=259.8
Q ss_pred eEEEEEeccCCC-----ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314 7 MHAVQYDSYGGG-----VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81 (327)
Q Consensus 7 ~~a~~~~~~g~~-----~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v 81 (327)
|||+++.++|.+ ++.+++++.+.|+|.++||+||+.++|||++|++.+.|.++ ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~v 76 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVEV 76 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEEe
Confidence 799999998863 57899999999999999999999999999999999988753 356899999999999999
Q ss_pred CCCCCCCCCCCEEEEEcc------------------------------------------------CcccceeEeecCCc
Q 020314 82 GSEVKNFKVGDKVVAVLS------------------------------------------------GGGLAEFAVAKESL 113 (327)
Q Consensus 82 G~~~~~~~~Gd~V~~~~~------------------------------------------------~g~~a~~~~~~~~~ 113 (327)
|++++++++||||++... .|+|+||+.++++.
T Consensus 77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence 999999999999986320 26899999999999
Q ss_pred eeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHH
Q 020314 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIE 191 (327)
Q Consensus 114 ~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~ 191 (327)
++++|+++++++|+.+++++.|||+++.+..++ +++++|||.| +|++|++++|+|+..|+ +|+++++ ++|++
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i-----~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~ 230 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGV-----RPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLA 230 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 999999999999999999999999998777777 8999999998 69999999999999999 6888874 57889
Q ss_pred HHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCch-hHHHHhhhhccccc
Q 020314 192 LVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR-VLLTFAWKKLTFSK 267 (327)
Q Consensus 192 ~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~ 267 (327)
+++++|++.++++.+.+ ..+.+.+.+ ++|++|||+|.. .+..++++++++|+++.+|.... ....+....+..++
T Consensus 231 ~a~~~Ga~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 309 (371)
T cd08281 231 LARELGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEE 309 (371)
T ss_pred HHHHcCCceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcC
Confidence 99999999999876654 223333444 799999999965 58899999999999999986532 22233444566778
Q ss_pred eeeEEEEeC--CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 268 KQLVPFSVS--PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 268 ~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
+++.+.+.. ...++++++++++++|+++. +++++|+++|+++||+.+.+++..||+|+
T Consensus 310 ~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 310 RTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 888875432 23567899999999999864 67889999999999999999998888764
No 8
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.1e-46 Score=334.98 Aligned_cols=307 Identities=21% Similarity=0.275 Sum_probs=257.7
Q ss_pred ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
||||+++.+++++ +++++.+.|++.++||+|||.++|+|++|++...|..+ ..+|.++|||++|+|+++|+++
T Consensus 1 ~mka~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v 73 (358)
T TIGR03451 1 TVRGVIARSKGAP---VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGV 73 (358)
T ss_pred CcEEEEEccCCCC---CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCC
Confidence 6999999998875 88899999999999999999999999999999988753 2578899999999999999999
Q ss_pred CCCCCCCEEEEEc----------------------------------------cCcccceeEeecCCceeeCCCCCChhh
Q 020314 86 KNFKVGDKVVAVL----------------------------------------SGGGLAEFAVAKESLTVARPQEVSAAE 125 (327)
Q Consensus 86 ~~~~~Gd~V~~~~----------------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~ 125 (327)
+++++||||++.. ..|+|+||+.+++..++++|+++++++
T Consensus 74 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~ 153 (358)
T TIGR03451 74 TDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAA 153 (358)
T ss_pred cccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhH
Confidence 9999999998621 248999999999999999999999999
Q ss_pred hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEe
Q 020314 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLD 203 (327)
Q Consensus 126 aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~ 203 (327)
++.+++++.++|+++.+..++ +++++|||+| +|++|++++|+|+..|+ +|+++++ ++|++.++++|++.+++
T Consensus 154 aa~l~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~ 227 (358)
T TIGR03451 154 AGLLGCGVMAGLGAAVNTGGV-----KRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN 227 (358)
T ss_pred hhhhcccchhhHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 999999999999988777777 8999999998 69999999999999999 4888874 57888999999999998
Q ss_pred CCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHHhhhhccccceeeEEEEe--CC
Q 020314 204 YKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPFSV--SP 277 (327)
Q Consensus 204 ~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~ 277 (327)
+.+.+ ..+.+.+.+.++|++|||+|++ .+..++++++++|+++.+|..... ...+....+..++.++.+.+. ..
T Consensus 228 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 228 SSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred CCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 87654 2344455667899999999975 588899999999999999865321 122333344556666766432 12
Q ss_pred CHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 278 KGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 278 ~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
..+.++++++++++|++++ +++++|+++|+++||+.+++++.. |++++
T Consensus 308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 4678899999999999864 678999999999999999988776 77765
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=5.4e-46 Score=330.37 Aligned_cols=305 Identities=26% Similarity=0.372 Sum_probs=254.1
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.+++ .+++++.+.|++.++||+||+.++|+|++|++.+.+.+.. +..+|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~ 74 (339)
T cd08239 1 MRGAVFPGDR----TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVT 74 (339)
T ss_pred CeEEEEecCC----ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCc
Confidence 7999998644 4999999999999999999999999999999988776432 124578999999999999999999
Q ss_pred CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314 87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138 (327)
Q Consensus 87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 138 (327)
.+++||||+..+ .+|+|++|+.++...++++|+++++++++.+++++.|||+
T Consensus 75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 154 (339)
T cd08239 75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH 154 (339)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 999999998743 2589999999999999999999999999999999999999
Q ss_pred HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCc-ccccCC
Q 020314 139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDG-AALKSP 215 (327)
Q Consensus 139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~ 215 (327)
++ ...++ ++|++|||+| +|++|++++|+|+++|++ |+++++ ++|++.++++|++.++++++.+. .+.+.+
T Consensus 155 ~l-~~~~~-----~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~ 227 (339)
T cd08239 155 AL-RRVGV-----SGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELT 227 (339)
T ss_pred HH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHh
Confidence 99 45666 7899999998 599999999999999997 888874 47888899999999998765432 233345
Q ss_pred CCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314 216 SGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL 294 (327)
Q Consensus 216 ~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 294 (327)
.++++|++|||+|++. +..++++++++|+++.+|........ ....+..+++++.+. .....++++++++++++|++
T Consensus 228 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~g~-~~~~~~~~~~~~~~~~~g~i 305 (339)
T cd08239 228 SGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIE-VSNDLIRKQRTLIGS-WYFSVPDMEECAEFLARHKL 305 (339)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccC-cHHHHHhCCCEEEEE-ecCCHHHHHHHHHHHHcCCC
Confidence 5568999999999876 57889999999999999865432111 123445677777774 33456789999999999998
Q ss_pred e--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 295 K--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 295 ~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+ ++++++|+++++++||+.+++++ .||+|+++
T Consensus 306 ~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 306 EVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred ChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 6 47888999999999999998875 69999864
No 10
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=8e-46 Score=330.71 Aligned_cols=307 Identities=18% Similarity=0.256 Sum_probs=250.5
Q ss_pred CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314 3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG 82 (327)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 82 (327)
.|+++++|.+.+..+ .+++.+.+.|.+.++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|
T Consensus 9 ~~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG 82 (360)
T PLN02586 9 HPQKAFGWAARDPSG---VLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF---TRYPIVPGHEIVGIVTKLG 82 (360)
T ss_pred chhheeEEEecCCCC---CceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC---CCCCccCCcceeEEEEEEC
Confidence 478888888866543 4888888888999999999999999999999998886531 2568999999999999999
Q ss_pred CCCCCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhhhc
Q 020314 83 SEVKNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGA 127 (327)
Q Consensus 83 ~~~~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa 127 (327)
++++++++||||+..+ .+|+|+||++++++.++++|+++++++++
T Consensus 83 ~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa 162 (360)
T PLN02586 83 KNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGA 162 (360)
T ss_pred CCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhh
Confidence 9999999999997421 15899999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCc-HHHHHhcCCCEEEeCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARN-IELVKSLGADEVLDYK 205 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~-~~~~~~lg~~~v~~~~ 205 (327)
.+++++.|+|+++.+...+ ++|++|||.| +|++|++++|+|+.+|+++++++. +++ .+.++++|++.++++.
T Consensus 163 ~l~~~~~ta~~al~~~~~~-----~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~ 236 (360)
T PLN02586 163 PLLCAGITVYSPMKYYGMT-----EPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVST 236 (360)
T ss_pred hhhcchHHHHHHHHHhccc-----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCC
Confidence 9999999999999666656 7899999987 699999999999999999888764 344 4566899999998765
Q ss_pred CCCcccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHH
Q 020314 206 TPDGAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF 284 (327)
Q Consensus 206 ~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (327)
+.+ .+.+.+ .++|++||++|.. .+..++++++++|+++.+|..... ..+....+..+...+.+ +......++++
T Consensus 237 ~~~-~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g-~~~~~~~~~~~ 311 (360)
T PLN02586 237 DPE-KMKAAI--GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP-LELPIFPLVLGRKLVGG-SDIGGIKETQE 311 (360)
T ss_pred CHH-HHHhhc--CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC-CccCHHHHHhCCeEEEE-cCcCCHHHHHH
Confidence 432 222222 2599999999975 488899999999999999864322 22333344555666655 33345678999
Q ss_pred HHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 285 LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 285 ~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++++++|++++.+ ++|+++|+++||+.+.+++..||+|+.+
T Consensus 312 ~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 312 MLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 99999999998766 5899999999999999999889999864
No 11
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-45 Score=328.17 Aligned_cols=303 Identities=16% Similarity=0.203 Sum_probs=245.2
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHh-cCCCCCCCCCCCeeecccceEEEEecCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQK-GMLRPFLPRKFPFIPASDVAGEVIGLGS 83 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 83 (327)
..+++.++.++++ +++++.+.| +.++||+|||.++|||++|++++. |.++.. +..+|.++|||++|+|+++
T Consensus 3 ~~~~~~~~~~~~~----~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~-~~~~p~v~GhE~~G~V~~v-- 74 (343)
T PRK09880 3 VKTQSCVVAGKKD----VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNF-VIKAPMVLGHEVIGKIVHS-- 74 (343)
T ss_pred ccceEEEEecCCc----eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccc-cccCCcccCcccEEEEEEe--
Confidence 4678999987665 899999887 689999999999999999999875 433211 2257899999999999999
Q ss_pred CCCCCCCCCEEEEEc--------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCc
Q 020314 84 EVKNFKVGDKVVAVL--------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPC 131 (327)
Q Consensus 84 ~~~~~~~Gd~V~~~~--------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~ 131 (327)
++++|++||||+..+ .+|+|+||++++++.++++|+++++++++ +..
T Consensus 75 ~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~ 153 (343)
T PRK09880 75 DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAE 153 (343)
T ss_pred cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhc
Confidence 788999999998531 25999999999999999999999987665 445
Q ss_pred hHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHHhcCCCEEEeCCCCCc
Q 020314 132 AGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVKSLGADEVLDYKTPDG 209 (327)
Q Consensus 132 ~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~ 209 (327)
++.++|+++.+ ... .++++|+|+| +|++|++++|+|+++|+ +|++++ +++|+++++++|++.++++++.+.
T Consensus 154 ~~~~a~~al~~-~~~-----~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~ 226 (343)
T PRK09880 154 PLAVAIHAAHQ-AGD-----LQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDL 226 (343)
T ss_pred HHHHHHHHHHh-cCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccH
Confidence 67899999954 444 5799999998 59999999999999999 688777 457899999999999998876542
Q ss_pred ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314 210 AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL 288 (327)
Q Consensus 210 ~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
....... +++|++|||+|++ .+..++++++++|+++.+|..... ..+....+..+++++.+... ..+++++++++
T Consensus 227 ~~~~~~~-g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~g~~~--~~~~~~~~~~l 302 (343)
T PRK09880 227 DHYKAEK-GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAP-PEFPMMTLIVKEISLKGSFR--FTEEFNTAVSW 302 (343)
T ss_pred HHHhccC-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHHhCCcEEEEEee--ccccHHHHHHH
Confidence 2221122 3699999999975 488999999999999999864322 23344455677777777443 24678999999
Q ss_pred HHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 289 VKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 289 ~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++|++++ +++++|+++|+++||+.+.+++..||+++.+
T Consensus 303 ~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 303 LANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred HHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 99999875 6788999999999999999988889999875
No 12
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.2e-45 Score=323.15 Aligned_cols=297 Identities=22% Similarity=0.269 Sum_probs=247.6
Q ss_pred EEEEeccCCCc-cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314 9 AVQYDSYGGGV-AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87 (327)
Q Consensus 9 a~~~~~~g~~~-~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 87 (327)
||.+.++|.+. +.+++++.+.|.|.++||+||+.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~ 77 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGG 77 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcc
Confidence 46677776532 56999999999999999999999999999999999887642 234789999999999999999999
Q ss_pred CCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 88 FKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 88 ~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
+++||||+..+ .+|+|+||+.+++..++++|+++++++++.+++++.|||++
T Consensus 78 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~ 157 (329)
T TIGR02822 78 FAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRA 157 (329)
T ss_pred cCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHH
Confidence 99999997421 25899999999999999999999999999999999999999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGR 218 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~ 218 (327)
+. ..++ ++|++|||+|+ |++|++++|+|+..|++|+++++ ++|+++++++|++.++++.+.. .+
T Consensus 158 ~~-~~~~-----~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~--------~~ 222 (329)
T TIGR02822 158 LL-RASL-----PPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP--------PE 222 (329)
T ss_pred HH-hcCC-----CCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC--------cc
Confidence 94 5677 89999999995 99999999999999999988874 5789999999999998754321 23
Q ss_pred cccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEe
Q 020314 219 KYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297 (327)
Q Consensus 219 ~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 297 (327)
++|+++++.+. ..+..++++++++|+++.+|...+....+....+.++++++.+. ....+.++.++++++++++++.
T Consensus 223 ~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~~l~~~g~i~~- 300 (329)
T TIGR02822 223 PLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSV-TSNTRADAREFLELAAQHGVRV- 300 (329)
T ss_pred cceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEe-ecCCHHHHHHHHHHHHhCCCee-
Confidence 68999988874 44889999999999999998643222223334445667777763 3345677899999999999974
Q ss_pred cceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 298 IDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 298 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
++++|+|+|+++||+.+.+++..||+|+
T Consensus 301 i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 301 TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 5789999999999999999999999987
No 13
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.1e-45 Score=328.95 Aligned_cols=311 Identities=20% Similarity=0.221 Sum_probs=254.9
Q ss_pred CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314 3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG 82 (327)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 82 (327)
.|++||++++.+++++ +++++.+.|.|.++||+||+.++|+|++|++.+.|.++. ...+|.++|||++|+|+++|
T Consensus 7 ~~~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~vG 81 (381)
T PLN02740 7 KVITCKAAVAWGPGEP---LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESVG 81 (381)
T ss_pred cceeeEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEeC
Confidence 3678999999887654 788899999999999999999999999999999887531 12578999999999999999
Q ss_pred CCCCCCCCCCEEEEEc---------------------------------------------------cCcccceeEeecC
Q 020314 83 SEVKNFKVGDKVVAVL---------------------------------------------------SGGGLAEFAVAKE 111 (327)
Q Consensus 83 ~~~~~~~~Gd~V~~~~---------------------------------------------------~~g~~a~~~~~~~ 111 (327)
++++.+++||||++.. .+|+|+||++++.
T Consensus 82 ~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~ 161 (381)
T PLN02740 82 EGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS 161 (381)
T ss_pred CCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence 9999999999998642 1489999999999
Q ss_pred CceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCc
Q 020314 112 SLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARN 189 (327)
Q Consensus 112 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~ 189 (327)
+.++++|+++++++++.+++++.|+|+++.+..++ ++|++|||+| +|++|++++|+|+.+|+ +|+++++ ++|
T Consensus 162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r 235 (381)
T PLN02740 162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANV-----QAGSSVAIFG-LGAVGLAVAEGARARGASKIIGVDINPEK 235 (381)
T ss_pred HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHCCCCcEEEEcCChHH
Confidence 99999999999999999999999999998777777 8999999998 69999999999999999 6888874 578
Q ss_pred HHHHHhcCCCEEEeCCCCC---c-ccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCchhH-HHHhhhh
Q 020314 190 IELVKSLGADEVLDYKTPD---G-AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPRVL-LTFAWKK 262 (327)
Q Consensus 190 ~~~~~~lg~~~v~~~~~~~---~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~ 262 (327)
++.++++|++.++++.+.+ . .+.+.+.+ ++|++||++|++ .+..++.+++++ |+++.+|...... ..+....
T Consensus 236 ~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~ 314 (381)
T PLN02740 236 FEKGKEMGITDFINPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPME 314 (381)
T ss_pred HHHHHHcCCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHH
Confidence 9999999999998876532 1 23333444 899999999975 588999999996 9999998654321 1111111
Q ss_pred ccccceeeEEEEeC--CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 263 LTFSKKQLVPFSVS--PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 263 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.++++++.+.... ....+++++++++.+++++. +++++|+++|+++|++.+.+++. .|++|++
T Consensus 315 -~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 315 -LFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred -HhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 2346667664432 22467899999999999754 68899999999999999998876 4998864
No 14
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.8e-46 Score=304.16 Aligned_cols=311 Identities=17% Similarity=0.176 Sum_probs=266.7
Q ss_pred CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314 3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG 82 (327)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 82 (327)
.+.++||.+..++++| |.++++..++|+.+||+||+.++++|++|.+.+.|..+ ...||.++|||.+|+|+++|
T Consensus 4 kvI~CKAAV~w~a~~P---L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~---~~~fP~IlGHEaaGIVESvG 77 (375)
T KOG0022|consen 4 KVITCKAAVAWEAGKP---LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP---EGLFPVILGHEAAGIVESVG 77 (375)
T ss_pred CceEEeEeeeccCCCC---eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCc---cccCceEecccceeEEEEec
Confidence 4678999999999998 99999999999999999999999999999999999853 34789999999999999999
Q ss_pred CCCCCCCCCCEEEEEc-------------------------------------------------cCcccceeEeecCCc
Q 020314 83 SEVKNFKVGDKVVAVL-------------------------------------------------SGGGLAEFAVAKESL 113 (327)
Q Consensus 83 ~~~~~~~~Gd~V~~~~-------------------------------------------------~~g~~a~~~~~~~~~ 113 (327)
++|+++++||+|+... ..++|+||.+++...
T Consensus 78 egV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~ 157 (375)
T KOG0022|consen 78 EGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDIS 157 (375)
T ss_pred CCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecce
Confidence 9999999999998765 345899999999999
Q ss_pred eeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHH
Q 020314 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIE 191 (327)
Q Consensus 114 ~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~ 191 (327)
+.+|++..+++.++++.+...|.|.|....+++ ++|+++.|+| .|++|+++++-|++.|+ ++++++ +++|.+
T Consensus 158 v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv-----~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~ 231 (375)
T KOG0022|consen 158 VAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKV-----EPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFE 231 (375)
T ss_pred eEecCCCCChhheeEeeccccccchhhhhhccc-----CCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHH
Confidence 999999999999999999999999999999999 9999999999 99999999999999998 999998 779999
Q ss_pred HHHhcCCCEEEeCCCCC---cccccCCCCCcccEEEeCCCCCc-ccccccccCCC-cEEEeecCCc-hhHHHHhhhhccc
Q 020314 192 LVKSLGADEVLDYKTPD---GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTT-GKVIDFNPSP-RVLLTFAWKKLTF 265 (327)
Q Consensus 192 ~~~~lg~~~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~ 265 (327)
.++++|++..+|+.+.. .+.+....+.|+|+-|||+|+.. +.+++.+...+ |.-+.+|... +...+..... .+
T Consensus 232 ~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~-l~ 310 (375)
T KOG0022|consen 232 KAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQ-LV 310 (375)
T ss_pred HHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhh-hc
Confidence 99999999999987433 22333333479999999999765 88999999988 9999988443 2222222222 23
Q ss_pred cceeeEEEEe--CCCHHHHHHHHHHHHCCce--eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 266 SKKQLVPFSV--SPKGENLDFLVKLVKEGKL--KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 266 ~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.+..+.+..+ ...+.++..+.+...++++ +..+++++||+++++||+.|.+|+.. |.|+.+
T Consensus 311 ~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 311 TGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred cccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence 3555665443 3467889999998888885 57999999999999999999999988 888764
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=5.3e-45 Score=327.35 Aligned_cols=305 Identities=19% Similarity=0.204 Sum_probs=253.6
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
..|||+++.++++ .+++++.+.|.+.++||+|||.++|+|++|++.+.+.. .+|.++|||++|+|+++|++
T Consensus 11 ~~mka~~~~~~~~---~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~------~~p~i~GhE~~G~V~~vG~~ 81 (378)
T PLN02827 11 ITCRAAVAWGAGE---ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA------LFPRIFGHEASGIVESIGEG 81 (378)
T ss_pred ceeEEEEEecCCC---CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC------CCCeeecccceEEEEEcCCC
Confidence 4699999987654 38899999999999999999999999999999887642 46789999999999999999
Q ss_pred CCCCCCCCEEEEEcc------------------------------------------------CcccceeEeecCCceee
Q 020314 85 VKNFKVGDKVVAVLS------------------------------------------------GGGLAEFAVAKESLTVA 116 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~~------------------------------------------------~g~~a~~~~~~~~~~~~ 116 (327)
++++++||||+.... +|+|+||+.+++..+++
T Consensus 82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~ 161 (378)
T PLN02827 82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
T ss_pred CcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEE
Confidence 999999999987531 27999999999999999
Q ss_pred CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHH
Q 020314 117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVK 194 (327)
Q Consensus 117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~ 194 (327)
+|+++++++++.+++++.++|+++.+..++ ++|++|||+| +|++|++++|+|+++|+ .|++++ +++|.+.++
T Consensus 162 iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~-----~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~ 235 (378)
T PLN02827 162 VDPLAPLHKICLLSCGVAAGLGAAWNVADV-----SKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK 235 (378)
T ss_pred CCCCCCHHHhhhhcchhHhhHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 999999999999999989999888676777 8999999998 69999999999999999 477776 457888999
Q ss_pred hcCCCEEEeCCCC--C-cc-cccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCchhHHHHhh-hhccccc
Q 020314 195 SLGADEVLDYKTP--D-GA-ALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPRVLLTFAW-KKLTFSK 267 (327)
Q Consensus 195 ~lg~~~v~~~~~~--~-~~-~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~ 267 (327)
++|++.++++.+. + .+ +.+.+.+ ++|++||++|.+ .+..+++.++++ |+++.+|..... ..+.. ..+.+++
T Consensus 236 ~lGa~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~ 313 (378)
T PLN02827 236 TFGVTDFINPNDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSG 313 (378)
T ss_pred HcCCcEEEcccccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcC
Confidence 9999999987653 2 12 3333443 899999999976 488999999998 999999865432 12211 2455678
Q ss_pred eeeEEEEeC--CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 268 KQLVPFSVS--PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 268 ~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++.+.... ....+++.+++++++|++++ +++++|+++++++|++.+.+++. +|+||++
T Consensus 314 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 314 RTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred ceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence 888775432 23567899999999999987 78899999999999999999887 5998864
No 16
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.1e-44 Score=319.90 Aligned_cols=309 Identities=27% Similarity=0.315 Sum_probs=252.3
Q ss_pred eEEEEEeccCCCc--cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 7 MHAVQYDSYGGGV--AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 7 ~~a~~~~~~g~~~--~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
||++++.+++++. +.+++++.+.|.|.++||+||+.++|+|++|++...|.++. ...+|.++|||++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~ 78 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGG 78 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCC
Confidence 7899999887532 56888899999999999999999999999999999887642 1256889999999999999999
Q ss_pred CCC-CCCCCEEEEEcc-CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE-c
Q 020314 85 VKN-FKVGDKVVAVLS-GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT-A 161 (327)
Q Consensus 85 ~~~-~~~Gd~V~~~~~-~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~-g 161 (327)
+++ +++||+|++... +|+|++|+.++++.++++|+++++++++.++..+.|||.++ +..+. ++++++|+ +
T Consensus 79 v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~------~~~~vlv~~~ 151 (324)
T cd08291 79 PLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE------EGAKAVVHTA 151 (324)
T ss_pred ccccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc------CCCcEEEEcc
Confidence 986 999999998643 39999999999999999999999999998888888997554 44443 45556666 7
Q ss_pred CCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccc
Q 020314 162 ASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPN 238 (327)
Q Consensus 162 ~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 238 (327)
++|++|++++|+|+++|++++++++ +++++.++++|++.++++...+ ..+.+.+.++++|++||++|+......+++
T Consensus 152 g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~ 231 (324)
T cd08291 152 AASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLA 231 (324)
T ss_pred CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHh
Confidence 8999999999999999999998885 4788889999999999887655 234445566789999999998887888999
Q ss_pred cCCCcEEEeecCCchhHH-HHhhhhccccceeeEEEEeC-----CCHHHHHHHHHHHHCCceeEecceeeccccHHHHHH
Q 020314 239 LGTTGKVIDFNPSPRVLL-TFAWKKLTFSKKQLVPFSVS-----PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWA 312 (327)
Q Consensus 239 l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~ 312 (327)
++++|+++.+|....... .+....+..++.++.++... ...+.+++++++++ +.+++.+.++|+++|+++||+
T Consensus 232 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~ 310 (324)
T cd08291 232 MPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIA 310 (324)
T ss_pred hCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHH
Confidence 999999999985432211 12223344556666554321 23567888999988 899999999999999999999
Q ss_pred HHhcCCCCccEEE
Q 020314 313 KSISGRATGKIIV 325 (327)
Q Consensus 313 ~~~~~~~~gkvvv 325 (327)
.+.+++..||+++
T Consensus 311 ~~~~~~~~Gkvv~ 323 (324)
T cd08291 311 FYSKNMSTGKKLL 323 (324)
T ss_pred HHHhCCCCCeEEe
Confidence 9999999999987
No 17
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.4e-44 Score=322.51 Aligned_cols=306 Identities=20% Similarity=0.233 Sum_probs=248.8
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||++++...++. +++++.+.|+|.++||+|||.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 2 ~~a~~~~~~~~~---l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~ 75 (368)
T TIGR02818 2 SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVT 75 (368)
T ss_pred ceEEEEecCCCC---eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCc
Confidence 899999887654 889999999999999999999999999999999887642 25789999999999999999999
Q ss_pred CCCCCCEEEEEcc------------------------------------------------CcccceeEeecCCceeeCC
Q 020314 87 NFKVGDKVVAVLS------------------------------------------------GGGLAEFAVAKESLTVARP 118 (327)
Q Consensus 87 ~~~~Gd~V~~~~~------------------------------------------------~g~~a~~~~~~~~~~~~ip 118 (327)
++++||||++... .|+|+||+++++..++++|
T Consensus 76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP 155 (368)
T TIGR02818 76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN 155 (368)
T ss_pred cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence 9999999987421 2689999999999999999
Q ss_pred CCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhc
Q 020314 119 QEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSL 196 (327)
Q Consensus 119 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~l 196 (327)
+++++++++.+++++.|+|+++.+..++ ++|++|||+| +|++|++++|+|+++|+ +|+++++ ++|++.++++
T Consensus 156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~-----~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~ 229 (368)
T TIGR02818 156 PAAPLEEVCLLGCGVTTGIGAVLNTAKV-----EEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKL 229 (368)
T ss_pred CCCCHHHhhhhcchhHHHHHHHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence 9999999999999999999998777777 8999999998 69999999999999999 7988874 5788999999
Q ss_pred CCCEEEeCCCCC----cccccCCCCCcccEEEeCCCCCc-ccccccccCCC-cEEEeecCCch-hHHHHhhhhcccccee
Q 020314 197 GADEVLDYKTPD----GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTT-GKVIDFNPSPR-VLLTFAWKKLTFSKKQ 269 (327)
Q Consensus 197 g~~~v~~~~~~~----~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~ 269 (327)
|++.++++.+.+ ..+.+.+.+ ++|++|||+|++. +..++++++++ |+++.+|.... ....+....+. ....
T Consensus 230 Ga~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~ 307 (368)
T TIGR02818 230 GATDCVNPNDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRV 307 (368)
T ss_pred CCCeEEcccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccce
Confidence 999999876422 123333444 8999999999754 88899999886 99999986431 11111111222 2223
Q ss_pred eEEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 270 LVPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+.+.... ..+.+++++++++++++++ ++++++|+++|+++|++.+.+++. .|+++.+
T Consensus 308 ~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 308 WRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred EEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 4443221 2356789999999999975 578899999999999999988765 6998864
No 18
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.4e-44 Score=322.15 Aligned_cols=307 Identities=18% Similarity=0.248 Sum_probs=251.1
Q ss_pred ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
++||+.+...+. +..+++.+.+.|+|.++||+|||.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 4 ~~~a~~~~~~~~-~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~---~~~p~i~GhE~aG~Vv~vG~~v 79 (375)
T PLN02178 4 QNKAFGWAANDE-SGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF---SRYPIIPGHEIVGIATKVGKNV 79 (375)
T ss_pred cceeEEEEEccC-CCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC---CCCCcccCceeeEEEEEECCCC
Confidence 467777776664 356888888888999999999999999999999999887531 2468899999999999999999
Q ss_pred CCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314 86 KNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP 130 (327)
Q Consensus 86 ~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~ 130 (327)
+++++||||+..+ .+|+|+||+.++++.++++|+++++++++.++
T Consensus 80 ~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~ 159 (375)
T PLN02178 80 TKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLL 159 (375)
T ss_pred CccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhh
Confidence 9999999997421 15899999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-C-cHHHHHhcCCCEEEeCCCCC
Q 020314 131 CAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-R-NIELVKSLGADEVLDYKTPD 208 (327)
Q Consensus 131 ~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~-~~~~~~~lg~~~v~~~~~~~ 208 (327)
+++.|+|+++.+.... .+++++|+|.| +|++|++++|+|+++|++|+++++. + +.+.++++|++.++++.+.
T Consensus 160 ~~~~ta~~al~~~~~~----~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~- 233 (375)
T PLN02178 160 CAGITVYSPMKYYGMT----KESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS- 233 (375)
T ss_pred ccchHHHHHHHHhCCC----CCCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH-
Confidence 9999999998544321 15899999998 6999999999999999998888743 3 4677889999999876542
Q ss_pred cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHH
Q 020314 209 GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK 287 (327)
Q Consensus 209 ~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
..+.+.+ .++|++|||+|.+ .+..++++++++|+++.+|..... ..+....+.++++++.+ +.....++++++++
T Consensus 234 ~~v~~~~--~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~ 309 (375)
T PLN02178 234 QKMKEAV--GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKP-LDLPIFPLVLGRKMVGG-SQIGGMKETQEMLE 309 (375)
T ss_pred HHHHHhh--CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCC-CccCHHHHHhCCeEEEE-eCccCHHHHHHHHH
Confidence 2222223 2699999999976 588999999999999999864322 23344455667777877 33345678999999
Q ss_pred HHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 288 LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 288 ~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++++|++++.+ ++|+|+|+++||+.+.+++..||+|+.+
T Consensus 310 l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 310 FCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 99999998776 5799999999999999999889999864
No 19
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=8.5e-44 Score=319.20 Aligned_cols=307 Identities=20% Similarity=0.225 Sum_probs=249.7
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
.+|||+++.+++++ +++++.+.|.|.++||+||+.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus 1 ~~~~a~~~~~~~~~---~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~ 74 (368)
T cd08300 1 ITCKAAVAWEAGKP---LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEG 74 (368)
T ss_pred CcceEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCC
Confidence 36899999877654 889999999999999999999999999999999887542 257899999999999999999
Q ss_pred CCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCceee
Q 020314 85 VKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTVA 116 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~~ 116 (327)
++++++||||++.. ..|+|+||+.+++..+++
T Consensus 75 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 154 (368)
T cd08300 75 VTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAK 154 (368)
T ss_pred CccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEe
Confidence 99999999998741 135899999999999999
Q ss_pred CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHH
Q 020314 117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVK 194 (327)
Q Consensus 117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~ 194 (327)
+|+++++++++.+++++.|+|+++.+..++ +++++|||+| +|++|++++|+|+.+|+ +|+++++ ++|++.++
T Consensus 155 iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~-----~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~ 228 (368)
T cd08300 155 INPEAPLDKVCLLGCGVTTGYGAVLNTAKV-----EPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAK 228 (368)
T ss_pred CCCCCChhhhhhhccchhhhHHHHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 999999999999999999999998777777 8999999998 69999999999999999 6888874 57888999
Q ss_pred hcCCCEEEeCCCCC----cccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCch-hHHHHhhhhccccc
Q 020314 195 SLGADEVLDYKTPD----GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPR-VLLTFAWKKLTFSK 267 (327)
Q Consensus 195 ~lg~~~v~~~~~~~----~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~ 267 (327)
++|++.++++.+.+ ..+.+.+.+ ++|++||++|++ .+..++++++++ |+++.+|.... .........+. ..
T Consensus 229 ~lGa~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~ 306 (368)
T cd08300 229 KFGATDCVNPKDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TG 306 (368)
T ss_pred HcCCCEEEcccccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hc
Confidence 99999999876542 123333444 899999999975 588899999886 99999986531 11111111111 22
Q ss_pred eeeEEEEe--CCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 268 KQLVPFSV--SPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 268 ~~~~~~~~--~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
..+.+... ...++++++++++++++++++ +++++|+++|+++||+.+.+++. .|++++
T Consensus 307 ~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 307 RVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 33444332 235678899999999999874 67899999999999999988775 588874
No 20
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=6.9e-44 Score=320.14 Aligned_cols=306 Identities=19% Similarity=0.189 Sum_probs=251.7
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
++|||+++.+++++ +++++.+.|++.++||+||+.++|+|++|++.+.|..+ ...+|.++|||++|+|+++|++
T Consensus 1 ~~~ka~~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~ 74 (369)
T cd08301 1 ITCKAAVAWEAGKP---LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEG 74 (369)
T ss_pred CccEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCC
Confidence 47999999887654 89999999999999999999999999999999988753 2357899999999999999999
Q ss_pred CCCCCCCCEEEEEc-------------------------------------------------cCcccceeEeecCCcee
Q 020314 85 VKNFKVGDKVVAVL-------------------------------------------------SGGGLAEFAVAKESLTV 115 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~-------------------------------------------------~~g~~a~~~~~~~~~~~ 115 (327)
++++++||||+..+ ..|+|+||..+++..++
T Consensus 75 v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~ 154 (369)
T cd08301 75 VTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVA 154 (369)
T ss_pred CCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEE
Confidence 99999999998742 13789999999999999
Q ss_pred eCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHH
Q 020314 116 ARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELV 193 (327)
Q Consensus 116 ~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~ 193 (327)
++|+++++++++.+++++.|+|+++.+..++ ++|++|||+| +|++|++++|+|+.+|+ +|+++++ +++.+++
T Consensus 155 ~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~ 228 (369)
T cd08301 155 KINPEAPLDKVCLLSCGVSTGLGAAWNVAKV-----KKGSTVAIFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA 228 (369)
T ss_pred ECCCCCCHHHhhhhcchhhHHHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 9999999999999999999999998777777 8999999998 69999999999999999 7988884 5788899
Q ss_pred HhcCCCEEEeCCCC--C-cc-cccCCCCCcccEEEeCCCCCc-ccccccccCCC-cEEEeecCCchh-HHHHhhhhcccc
Q 020314 194 KSLGADEVLDYKTP--D-GA-ALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTT-GKVIDFNPSPRV-LLTFAWKKLTFS 266 (327)
Q Consensus 194 ~~lg~~~v~~~~~~--~-~~-~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~ 266 (327)
+++|++.++++.+. . .+ +.+.+. +++|++||++|+.. +..++++++++ |+++.+|..... ...+.... .++
T Consensus 229 ~~~Ga~~~i~~~~~~~~~~~~v~~~~~-~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~-~~~ 306 (369)
T cd08301 229 KKFGVTEFVNPKDHDKPVQEVIAEMTG-GGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMN-LLN 306 (369)
T ss_pred HHcCCceEEcccccchhHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHH-Hhc
Confidence 99999998887652 2 12 223333 37999999999764 78889999996 999999865421 12222222 235
Q ss_pred ceeeEEEEeC--CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 267 KKQLVPFSVS--PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 267 ~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
++++.+.... ..+.+++++++++.++.++. +++++|+++|+++||+.+.+++.. |+++
T Consensus 307 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 307 GRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred CCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 6667764332 23567899999999998754 678899999999999999998875 8876
No 21
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.3e-44 Score=316.33 Aligned_cols=314 Identities=23% Similarity=0.259 Sum_probs=249.6
Q ss_pred CccceEEEEEeccCCC---ccceEEeec---cCC-CCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecc--c
Q 020314 3 GKAVMHAVQYDSYGGG---VAGLKHVEV---PVP-TPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPAS--D 73 (327)
Q Consensus 3 ~~~~~~a~~~~~~g~~---~~~l~~~~~---~~~-~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~--e 73 (327)
.+.++|.|++.+..++ +++|++++. +.| ++.+||||||+.++++|+.|+..+.+.... ...|.++|+ |
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~---~~~p~~~G~~~~ 81 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS---YLPPFVPGQRIE 81 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC---CCCCcCCCCeeE
Confidence 4677899999765421 466888874 554 357999999999999999998755442221 135788997 8
Q ss_pred ceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCc--ee--eCCCCCChh-hhcccCchHHHHHHHHHHhhCCcc
Q 020314 74 VAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESL--TV--ARPQEVSAA-EGAGIPCAGLTAHQALTQSLGVKL 148 (327)
Q Consensus 74 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~--~~--~ip~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~ 148 (327)
++|+|..+|++++++++||+|+++ |+|++|..++... ++ ++|++++++ +++.+++++.|||+++.+..++
T Consensus 82 ~~G~v~~vg~~v~~~~~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~-- 156 (348)
T PLN03154 82 GFGVSKVVDSDDPNFKPGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSP-- 156 (348)
T ss_pred eeEEEEEEecCCCCCCCCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCC--
Confidence 899999999999999999999874 6899999998753 54 459999986 6889999999999999777778
Q ss_pred CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCCEEEeCCCC-C-cccccCCCCCcccEEE
Q 020314 149 DGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGADEVLDYKTP-D-GAALKSPSGRKYDAVI 224 (327)
Q Consensus 149 ~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~~v~~~~~~-~-~~~~~~~~~~~~d~v~ 224 (327)
++|++|||+|++|++|++++|+|+++|++|++++++ ++.+.++ ++|++.++++++. + .+.+....++++|++|
T Consensus 157 ---~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~ 233 (348)
T PLN03154 157 ---KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYF 233 (348)
T ss_pred ---CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEE
Confidence 899999999999999999999999999999988754 6788776 7999999998643 3 2222222235899999
Q ss_pred eCCCCCcccccccccCCCcEEEeecCCchhHH-----HHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCcee
Q 020314 225 NCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLL-----TFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLK 295 (327)
Q Consensus 225 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~ 295 (327)
|++|+..+..++++++++|+++.+|....... ......+.++++++.+++... ..+.++++++++++|+++
T Consensus 234 d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~ 313 (348)
T PLN03154 234 DNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIV 313 (348)
T ss_pred ECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 99998788999999999999999986432211 112234556777777754321 245678899999999999
Q ss_pred EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 296 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+.+...|+|+++++||+.+++++..||+|+++
T Consensus 314 ~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 314 YIEDMSEGLESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred CceecccCHHHHHHHHHHHHcCCCCceEEEEe
Confidence 88878899999999999999999999999874
No 22
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.4e-43 Score=316.18 Aligned_cols=305 Identities=22% Similarity=0.298 Sum_probs=252.6
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
..+++|++.++++. +++++.+.|++.++||+||+.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus 8 ~~~~~~~~~~~~~~---~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~ 81 (357)
T PLN02514 8 KKTTGWAARDPSGH---LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSD 81 (357)
T ss_pred ceEEEEEEecCCCC---ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCC
Confidence 34899999988865 899999999999999999999999999999998886531 246889999999999999999
Q ss_pred CCCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhhhccc
Q 020314 85 VKNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGI 129 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~ 129 (327)
++++++||+|+..+ .+|+|++|+.++...++++|+++++++++.+
T Consensus 82 v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l 161 (357)
T PLN02514 82 VSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPL 161 (357)
T ss_pred cccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhh
Confidence 99999999997421 2589999999999999999999999999999
Q ss_pred CchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCC
Q 020314 130 PCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTP 207 (327)
Q Consensus 130 ~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~ 207 (327)
++++.|||+++.+.... ++|++|+|+| +|++|++++|+|+++|++++++++. +++. .++++|++.++++.+.
T Consensus 162 ~~~~~ta~~al~~~~~~-----~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~ 235 (357)
T PLN02514 162 LCAGVTVYSPLSHFGLK-----QSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA 235 (357)
T ss_pred hhhHHHHHHHHHHcccC-----CCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh
Confidence 99999999999665555 7899999997 7999999999999999998888754 4544 4467999887765432
Q ss_pred CcccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314 208 DGAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV 286 (327)
Q Consensus 208 ~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
. .+.+.+ .++|++||++|.. .+..++++++++|+++.+|..... ..+....+.++++++.+. ......++++++
T Consensus 236 ~-~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~ 310 (357)
T PLN02514 236 A-EMQEAA--DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP-LQFVTPMLMLGRKVITGS-FIGSMKETEEML 310 (357)
T ss_pred H-HHHHhc--CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC-CcccHHHHhhCCcEEEEE-ecCCHHHHHHHH
Confidence 1 222222 3699999999964 588899999999999999965432 234445566777888874 344567899999
Q ss_pred HHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 287 KLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 287 ~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++++|++++.+ ++|+++|+.+||+.+.+++..||+++.+
T Consensus 311 ~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 311 EFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred HHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence 999999998766 5899999999999999999889999864
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=8.8e-44 Score=317.84 Aligned_cols=308 Identities=20% Similarity=0.245 Sum_probs=238.2
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++...+ ++ +++++.+.|+|.++||+|||.++|||++|++.+.|.++...+..+|.++|||++|+|+++|++ +
T Consensus 1 mka~~~~~~~--~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~ 76 (355)
T cd08230 1 MKAIAVKPGK--PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S 76 (355)
T ss_pred CceeEecCCC--CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence 6899997533 23 899999999999999999999999999999999987643222246899999999999999999 9
Q ss_pred CCCCCCEEEEEc------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHH
Q 020314 87 NFKVGDKVVAVL------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTA 136 (327)
Q Consensus 87 ~~~~Gd~V~~~~------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta 136 (327)
.|++||||+... .+|+|+||+.++++.++++|++++ +++++..++.++
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~ 154 (355)
T cd08230 77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVV 154 (355)
T ss_pred CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHH
Confidence 999999998642 248899999999999999999998 445555566666
Q ss_pred HHHHHHhhCCc-cCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec----CCcHHHHHhcCCCEEEeCCCCCccc
Q 020314 137 HQALTQSLGVK-LDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG----ARNIELVKSLGADEVLDYKTPDGAA 211 (327)
Q Consensus 137 ~~al~~~~~~~-~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~----~~~~~~~~~lg~~~v~~~~~~~~~~ 211 (327)
++++.....+. ....+++++|+|+| +|++|++++|+|+..|++|+++++ ++|++.++++|++. +++.+.+...
T Consensus 155 ~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~~ 232 (355)
T cd08230 155 EKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVAE 232 (355)
T ss_pred HHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchhh
Confidence 65553322110 00116899999998 699999999999999999998875 35788899999987 4554433211
Q ss_pred ccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCch-hHHHHh----hhhccccceeeEEEEeCCCHHHHHHH
Q 020314 212 LKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR-VLLTFA----WKKLTFSKKQLVPFSVSPKGENLDFL 285 (327)
Q Consensus 212 ~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
.. ...++|++|||+|++ .+..++++++++|+++.+|.... ....+. ...+.++++++.+. .....++++++
T Consensus 233 ~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~-~~~~~~~~~~~ 309 (355)
T cd08230 233 VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGS-VNANKRHFEQA 309 (355)
T ss_pred hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEe-cCCchhhHHHH
Confidence 11 235799999999976 48899999999999999986543 112222 34567788888884 34456778899
Q ss_pred HHHHHCCc------eeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 286 VKLVKEGK------LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 286 ~~~~~~g~------l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++++.++. +++.++++|+++|+++||+.+.++. +|+++.+
T Consensus 310 ~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 310 VEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 99998776 5667889999999999999987654 5999864
No 24
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1e-43 Score=310.79 Aligned_cols=293 Identities=19% Similarity=0.263 Sum_probs=231.8
Q ss_pred ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeC-hhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASIN-PIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~-~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
+||++++.+++ .+++++.+.|+|.++||+||+.++||| .+|++.+.|.++......+|.++|||++|+|+++|++
T Consensus 1 ~~ka~~~~~~~----~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~ 76 (308)
T TIGR01202 1 KTQAIVLSGPN----QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD 76 (308)
T ss_pred CceEEEEeCCC----eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence 58999997644 499999999999999999999999996 6999998887643211257999999999999999999
Q ss_pred CCCCCCCCEEEEEc---------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCC
Q 020314 85 VKNFKVGDKVVAVL---------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQK 155 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~---------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~ 155 (327)
+ ++++||||+... ..|+|+||+.++++.++++|++++++. +.++ ++.|||+++.+ . . .+++
T Consensus 77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~-----~~~~ 146 (308)
T TIGR01202 77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-E-----VKVL 146 (308)
T ss_pred C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-c-----cCCC
Confidence 8 699999998632 159999999999999999999999864 4444 46899999954 2 2 4678
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEe-c-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-c
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATC-G-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-W 232 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~ 232 (327)
+++|+| +|++|++++|+|+++|+++++++ . ++|++.+.. ..++|+.+. .+.++|++|||+|++. +
T Consensus 147 ~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i~~~~~--------~~~g~Dvvid~~G~~~~~ 214 (308)
T TIGR01202 147 PDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVLDPEKD--------PRRDYRAIYDASGDPSLI 214 (308)
T ss_pred cEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---ccccChhhc--------cCCCCCEEEECCCCHHHH
Confidence 899998 79999999999999999755544 2 245554443 334544321 2357999999999865 7
Q ss_pred cccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHH
Q 020314 233 STFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDA 310 (327)
Q Consensus 233 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a 310 (327)
..++++++++|+++.+|..... ..+....+..+++++.+ +.....++++++++++++|++++ ++++.|+++|+++|
T Consensus 215 ~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A 292 (308)
T TIGR01202 215 DTLVRRLAKGGEIVLAGFYTEP-VNFDFVPAFMKEARLRI-AAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEA 292 (308)
T ss_pred HHHHHhhhcCcEEEEEeecCCC-cccccchhhhcceEEEE-ecccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHH
Confidence 8999999999999999865332 23344455566677766 33445678999999999999864 78899999999999
Q ss_pred HHHHhcCCCCccEEEe
Q 020314 311 WAKSISGRATGKIIVE 326 (327)
Q Consensus 311 ~~~~~~~~~~gkvvv~ 326 (327)
++.+.++...+|++++
T Consensus 293 ~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 293 YMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHhcCcCceEEEeC
Confidence 9998877777899874
No 25
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.1e-43 Score=316.32 Aligned_cols=306 Identities=19% Similarity=0.206 Sum_probs=250.4
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
++|||+++.+.++. +++++.+.|.+.++||+||+.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus 1 ~~~ka~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~ 73 (365)
T cd08277 1 IKCKAAVAWEAGKP---LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEG 73 (365)
T ss_pred CccEEEEEccCCCC---cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCC
Confidence 46899999876654 88999999999999999999999999999999988753 357899999999999999999
Q ss_pred CCCCCCCCEEEEEc-----------------------------------------------cCcccceeEeecCCceeeC
Q 020314 85 VKNFKVGDKVVAVL-----------------------------------------------SGGGLAEFAVAKESLTVAR 117 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~-----------------------------------------------~~g~~a~~~~~~~~~~~~i 117 (327)
++++++||||++.. ..|+|+||++++.+.++++
T Consensus 74 v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~l 153 (365)
T cd08277 74 VTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKI 153 (365)
T ss_pred CccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEEC
Confidence 99999999998742 1478999999999999999
Q ss_pred CCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHh
Q 020314 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKS 195 (327)
Q Consensus 118 p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~ 195 (327)
|+++++++++.+++++.|||+++.+..++ ++|++|+|+| +|++|++++++|+++|+ +|+++++ ++|++.+++
T Consensus 154 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~-----~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~ 227 (365)
T cd08277 154 DPAAPLEHVCLLGCGFSTGYGAAWNTAKV-----EPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE 227 (365)
T ss_pred CCCCCHHHhhHhcchhHHHHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999998777777 8999999997 69999999999999999 7888875 478888999
Q ss_pred cCCCEEEeCCCCC---c-ccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCchhHHHHhhhhcccccee
Q 020314 196 LGADEVLDYKTPD---G-AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPRVLLTFAWKKLTFSKKQ 269 (327)
Q Consensus 196 lg~~~v~~~~~~~---~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 269 (327)
+|++.++++.+.+ . .+.+.+. +++|++|||+|+. .+..++++++++ |+++.+|...+....+....+.. +++
T Consensus 228 ~ga~~~i~~~~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~ 305 (365)
T cd08277 228 FGATDFINPKDSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRT 305 (365)
T ss_pred cCCCcEeccccccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCE
Confidence 9999998876532 1 2333344 5899999999964 478899999885 99999986542212222222222 556
Q ss_pred eEEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 270 LVPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
+.+.+.. .....+++++++++++.++ ++++++|+++|+++||+.+.+++. .|+++.
T Consensus 306 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~ 365 (365)
T cd08277 306 WKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT 365 (365)
T ss_pred EEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence 6664332 2356789999999998755 578899999999999999998874 588863
No 26
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-43 Score=313.77 Aligned_cols=305 Identities=22% Similarity=0.268 Sum_probs=246.6
Q ss_pred eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
|||+++++++. +++++.+.|++ .++||+||+.++|+|++|++...+... ..+|.++|||++|+|+++|+++
T Consensus 1 Mka~~~~~~~~----~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~----~~~p~i~G~e~~G~V~~vG~~v 72 (347)
T PRK10309 1 MKSVVNDTDGI----VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA----HYYPITLGHEFSGYVEAVGSGV 72 (347)
T ss_pred CceEEEeCCCc----eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC----CCCCcccccceEEEEEEeCCCC
Confidence 79999987654 89999999987 589999999999999999975432211 1357899999999999999999
Q ss_pred CCCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314 86 KNFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138 (327)
Q Consensus 86 ~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 138 (327)
+++++||||++.+ ..|+|++|+.++++.++++|+++++++++.+. +++++|+
T Consensus 73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~ 151 (347)
T PRK10309 73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH 151 (347)
T ss_pred CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence 9999999998753 26899999999999999999999999998774 4566888
Q ss_pred HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCC-cccccCC
Q 020314 139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPD-GAALKSP 215 (327)
Q Consensus 139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~ 215 (327)
++ +..++ +++++|+|+| +|++|++++|+|+.+|++ |+++++ +++++.++++|++.++++++.+ ..+.+.+
T Consensus 152 ~~-~~~~~-----~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~ 224 (347)
T PRK10309 152 AF-HLAQG-----CEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVL 224 (347)
T ss_pred HH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHh
Confidence 86 55666 7899999997 699999999999999996 677764 4788888999999998876544 2334445
Q ss_pred CCCccc-EEEeCCCCC-cccccccccCCCcEEEeecCCchhH-H-HHhhhhccccceeeEEEEeCC----CHHHHHHHHH
Q 020314 216 SGRKYD-AVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVL-L-TFAWKKLTFSKKQLVPFSVSP----KGENLDFLVK 287 (327)
Q Consensus 216 ~~~~~d-~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 287 (327)
.+.++| ++|||+|++ .+..++++++++|+++.+|...... . ......+..+++++.+.+... ..++++.+++
T Consensus 225 ~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 304 (347)
T PRK10309 225 RELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASR 304 (347)
T ss_pred cCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHH
Confidence 556788 999999975 5889999999999999998643321 1 111224556777777744321 2578899999
Q ss_pred HHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 288 LVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 288 ~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++++|.++ +.++++|+++|+++|++.+.+++..||+|+++
T Consensus 305 ~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 305 LLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 99999974 67889999999999999999998889999875
No 27
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=3.5e-43 Score=316.05 Aligned_cols=304 Identities=18% Similarity=0.212 Sum_probs=235.6
Q ss_pred ceEEEEEeccCCCccceEEeeccCCCCC-------CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEE
Q 020314 6 VMHAVQYDSYGGGVAGLKHVEVPVPTPN-------KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEV 78 (327)
Q Consensus 6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~-------~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V 78 (327)
-|||+++.++++ +++++.+.|+|. ++||+|||.++|||++|++++.|.++ ..+|.++|||++|+|
T Consensus 2 ~mka~v~~~~~~----~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~----~~~p~i~GhE~~G~V 73 (393)
T TIGR02819 2 GNRGVVYLGPGK----VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT----APTGLVLGHEITGEV 73 (393)
T ss_pred CceEEEEecCCc----eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC----CCCCccccceeEEEE
Confidence 489999987665 899999998874 68999999999999999999988653 256899999999999
Q ss_pred EecCCCCCCCCCCCEEEEEc-------------------------------------cCcccceeEeecCC--ceeeCCC
Q 020314 79 IGLGSEVKNFKVGDKVVAVL-------------------------------------SGGGLAEFAVAKES--LTVARPQ 119 (327)
Q Consensus 79 ~~vG~~~~~~~~Gd~V~~~~-------------------------------------~~g~~a~~~~~~~~--~~~~ip~ 119 (327)
+++|++++++++||||+..+ .+|+|+||+++++. +++++|+
T Consensus 74 ~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~ 153 (393)
T TIGR02819 74 IEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPD 153 (393)
T ss_pred EEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCC
Confidence 99999999999999997631 24899999999964 7999999
Q ss_pred CCCh----hhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-c-CCcHHHH
Q 020314 120 EVSA----AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-G-ARNIELV 193 (327)
Q Consensus 120 ~~~~----~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~-~~~~~~~ 193 (327)
+++. .+++.+.+++.++|+++. ..++ +++++|||.| +|++|++++|+|+++|++++.++ + ++|++++
T Consensus 154 ~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~-----~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a 226 (393)
T TIGR02819 154 RDQALEKIRDLTMLSDIFPTGYHGAV-TAGV-----GPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA 226 (393)
T ss_pred cccccccccceeeeccHHHHHHHHHH-hcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH
Confidence 8653 356777888999999984 5666 8999999966 79999999999999999755543 3 4689999
Q ss_pred HhcCCCEEEeCC-CCC--cccccCCCCCcccEEEeCCCCC---------------cccccccccCCCcEEEeecCCc-hh
Q 020314 194 KSLGADEVLDYK-TPD--GAALKSPSGRKYDAVINCVTGI---------------PWSTFEPNLGTTGKVIDFNPSP-RV 254 (327)
Q Consensus 194 ~~lg~~~v~~~~-~~~--~~~~~~~~~~~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~-~~ 254 (327)
+++|++. +++. +.+ ..+.+.+.++++|++||++|.+ .++.++++++++|+++.+|... +.
T Consensus 227 ~~~Ga~~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~ 305 (393)
T TIGR02819 227 RSFGCET-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTED 305 (393)
T ss_pred HHcCCeE-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcc
Confidence 9999975 4443 223 2234445667899999999975 5889999999999999999652 11
Q ss_pred HH-----------HHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--ecc-eeeccccHHHHHHHHhcCCCC
Q 020314 255 LL-----------TFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VID-SKHSLSKAEDAWAKSISGRAT 320 (327)
Q Consensus 255 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~-~~~~~~~~~~a~~~~~~~~~~ 320 (327)
.. .+.......++.++.+ ......+.+.++++++++|+++. +++ ++|+++++++||+.+.+++.
T Consensus 306 ~~~~~~~~~~~~~~i~~~~~~~~~~~i~g-~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~- 383 (393)
T TIGR02819 306 PGAVDAAAKTGSLSIRFGLGWAKSHSFHT-GQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA- 383 (393)
T ss_pred cccccccccccccccchHHhhccCceEEe-ccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-
Confidence 11 1112222333444443 22222244578999999999864 455 78999999999999998754
Q ss_pred ccEEEeC
Q 020314 321 GKIIVEP 327 (327)
Q Consensus 321 gkvvv~~ 327 (327)
+|+++.+
T Consensus 384 ~Kvvi~~ 390 (393)
T TIGR02819 384 KKFVIDP 390 (393)
T ss_pred eEEEEeC
Confidence 7999864
No 28
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=8.6e-43 Score=308.04 Aligned_cols=312 Identities=24% Similarity=0.321 Sum_probs=257.5
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.+++++++.+++++.+.|.+.++||+||+.++++|+.|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v~ 78 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGVK 78 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCCC
Confidence 689999887764466899999999999999999999999999999998887642 124578999999999999999999
Q ss_pred CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314 87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV 166 (327)
Q Consensus 87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~ 166 (327)
++++||+|++....|+|++|++++...++++|+++++++++.++..+.++|+++ ...++ +++++|||+|++|.+
T Consensus 79 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~-----~~g~~vlI~g~~g~i 152 (324)
T cd08292 79 GLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGV-----KPGQWLIQNAAGGAV 152 (324)
T ss_pred CCCCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCC-----CCCCEEEEcccccHH
Confidence 999999999865589999999999999999999999999999998889999998 45677 899999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCc
Q 020314 167 GLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243 (327)
Q Consensus 167 G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G 243 (327)
|++++++|+++|++++++++. ++.+.++++|.+.++++.+.+ ..+.+.+.++++|++|||+|+.....++++++++|
T Consensus 153 g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g 232 (324)
T cd08292 153 GKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGG 232 (324)
T ss_pred HHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCc
Confidence 999999999999999888754 666777778998888876654 23445567788999999999888889999999999
Q ss_pred EEEeecCCchhHHHHhhhhccccceeeEEEEeC----C-----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314 244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS----P-----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS 314 (327)
Q Consensus 244 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~ 314 (327)
+++.+|........+......+++..+.+.... . ..+.++.+++++.+|.+++.+.+.|++++++++++.+
T Consensus 233 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~ 312 (324)
T cd08292 233 TLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAAS 312 (324)
T ss_pred EEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHH
Confidence 999998543221222222233455555543221 0 1356888999999999986667889999999999999
Q ss_pred hcCCCCccEEEe
Q 020314 315 ISGRATGKIIVE 326 (327)
Q Consensus 315 ~~~~~~gkvvv~ 326 (327)
.++...||+++.
T Consensus 313 ~~~~~~~kvvv~ 324 (324)
T cd08292 313 MRPGRAGKVLLR 324 (324)
T ss_pred HcCCCCceEEeC
Confidence 988888999873
No 29
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=8.5e-43 Score=282.47 Aligned_cols=317 Identities=26% Similarity=0.312 Sum_probs=271.5
Q ss_pred CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314 3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG 82 (327)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 82 (327)
.|...|++++.++|+|.+.+++++.++|+...++|+||.+++.|||+|+..++|.||.. | ++|.+-|+|++|+|+.+|
T Consensus 16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr-P-~~PAVgGnEGv~eVv~vG 93 (354)
T KOG0025|consen 16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR-P-ELPAVGGNEGVGEVVAVG 93 (354)
T ss_pred cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC-C-CCCcccCCcceEEEEEec
Confidence 35567999999999999999999999999888889999999999999999999999743 2 678999999999999999
Q ss_pred CCCCCCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314 83 SEVKNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA 161 (327)
Q Consensus 83 ~~~~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g 161 (327)
+++++|++||+|+... ..|.|++|.+.+++.++++++.++++.||++....+|||..|.+..++ .+|++|+-.|
T Consensus 94 s~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L-----~~GD~vIQNg 168 (354)
T KOG0025|consen 94 SNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQL-----NKGDSVIQNG 168 (354)
T ss_pred CCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhc-----CCCCeeeecC
Confidence 9999999999999876 458999999999999999999999999999999999999999999999 8999999999
Q ss_pred CCChHHHHHHHHHHhCCCeEEEEecCC-c----HHHHHhcCCCEEEeCCCCCc-ccc-cCCCCCcccEEEeCCCCCcccc
Q 020314 162 ASGAVGLYAVQLAKLGNTHVTATCGAR-N----IELVKSLGADEVLDYKTPDG-AAL-KSPSGRKYDAVINCVTGIPWST 234 (327)
Q Consensus 162 ~~g~~G~~~~~la~~~g~~v~~~~~~~-~----~~~~~~lg~~~v~~~~~~~~-~~~-~~~~~~~~d~v~d~~g~~~~~~ 234 (327)
|.+++|++.+|+|+++|++-+-++|++ . .+.++.+|+++|+..++... +.. .......+.+.|||+|+.....
T Consensus 169 anS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~ 248 (354)
T KOG0025|consen 169 ANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATE 248 (354)
T ss_pred cccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHH
Confidence 999999999999999999888888542 2 34567899999986544331 111 1123456899999999999889
Q ss_pred cccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-C-----CH----HHHHHHHHHHHCCceeEecceeecc
Q 020314 235 FEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-P-----KG----ENLDFLVKLVKEGKLKTVIDSKHSL 304 (327)
Q Consensus 235 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~----~~~~~~~~~~~~g~l~~~~~~~~~~ 304 (327)
..+.|.++|.++.+|..+..+.......+.|+.+.++|++.. + ++ +.+.++.++++.|+|..+..+..++
T Consensus 249 iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L 328 (354)
T KOG0025|consen 249 IARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPL 328 (354)
T ss_pred HHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeec
Confidence 999999999999999998888888888999999999998652 1 12 3457888999999999988889999
Q ss_pred ccHHHHHHHHhcCCC-CccEEEe
Q 020314 305 SKAEDAWAKSISGRA-TGKIIVE 326 (327)
Q Consensus 305 ~~~~~a~~~~~~~~~-~gkvvv~ 326 (327)
++-+.|++....... .||.++.
T Consensus 329 ~~~~tald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 329 ADHKTALDAALSKFGKSGKQIIV 351 (354)
T ss_pred hhhhHHHHHHHHHhccCCceEEE
Confidence 999988886654433 3566553
No 30
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=8.3e-43 Score=316.57 Aligned_cols=312 Identities=20% Similarity=0.270 Sum_probs=243.2
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHH-hcCCCCCCC---CCCCeeecccceEEEEe
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQ-KGMLRPFLP---RKFPFIPASDVAGEVIG 80 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~-~g~~~~~~~---~~~p~~~G~e~~G~V~~ 80 (327)
|+||+++++++++ +++++.+.|++.++||+|||.++|+|++|++.+ .|...+..+ ..+|.++|||++|+|++
T Consensus 1 m~~~a~~~~~~~~----l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~ 76 (410)
T cd08238 1 MKTKAWRMYGKGD----LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILK 76 (410)
T ss_pred CCcEEEEEEcCCc----eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEE
Confidence 5689999987654 999999999999999999999999999999976 454211100 14688999999999999
Q ss_pred cCCCCC-CCCCCCEEEEEc----------------cCcccceeEeecCC----ceeeCCCCCChhhhcccCc-hH-HHHH
Q 020314 81 LGSEVK-NFKVGDKVVAVL----------------SGGGLAEFAVAKES----LTVARPQEVSAAEGAGIPC-AG-LTAH 137 (327)
Q Consensus 81 vG~~~~-~~~~Gd~V~~~~----------------~~g~~a~~~~~~~~----~~~~ip~~~~~~~aa~~~~-~~-~ta~ 137 (327)
+|++++ ++++||||+..+ .+|+|+||++++++ .++++|+++++++++.+.. +. .+++
T Consensus 77 vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~ 156 (410)
T cd08238 77 VGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAY 156 (410)
T ss_pred eCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHh
Confidence 999998 699999998742 25999999999987 6899999999999886522 11 1234
Q ss_pred HHH--------HHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC---eEEEEec-CCcHHHHHhc--------C
Q 020314 138 QAL--------TQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT---HVTATCG-ARNIELVKSL--------G 197 (327)
Q Consensus 138 ~al--------~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~---~v~~~~~-~~~~~~~~~l--------g 197 (327)
.++ .+..++ ++|++|+|+|++|++|++++|+|+++|+ +|+++++ ++|++.++++ |
T Consensus 157 ~a~~~~~~~~~~~~~~~-----~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~G 231 (410)
T cd08238 157 TANYHLQPGEYRHRMGI-----KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRG 231 (410)
T ss_pred hhcccccccchhhhcCC-----CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccC
Confidence 332 234556 8899999999999999999999999764 7888874 4788888887 6
Q ss_pred CC-EEEeCCC-CC--cccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCC-ch-hHHHHhhhhccccceee
Q 020314 198 AD-EVLDYKT-PD--GAALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPS-PR-VLLTFAWKKLTFSKKQL 270 (327)
Q Consensus 198 ~~-~v~~~~~-~~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~-~~-~~~~~~~~~~~~~~~~~ 270 (327)
++ .++++.+ .+ ..+.+.+.++++|++||++|. ..+..++++++++|+++.++.. .. ....+....+.++++++
T Consensus 232 a~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i 311 (410)
T cd08238 232 IELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHY 311 (410)
T ss_pred ceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEE
Confidence 66 4666543 22 223344566789999999985 4488999999999988776432 11 11234445667788888
Q ss_pred EEEEeCCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 271 VPFSVSPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.+. .....++++++++++++|++++ +++++|+++|+++|++.+. ++..||+|+.+
T Consensus 312 ~g~-~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 312 VGT-SGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred EEe-CCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence 873 3456678999999999999886 7889999999999999999 77789999864
No 31
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=8.2e-43 Score=309.40 Aligned_cols=299 Identities=16% Similarity=0.164 Sum_probs=230.7
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCC-CCCCCeeecccceEEEEecCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFL-PRKFPFIPASDVAGEVIGLGS 83 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~vG~ 83 (327)
|..|+++++++++ +++++.+.|. .++||+|||.++|||++|++++.|.+.+.. ...+|.++|||++|+|+++|.
T Consensus 1 ~~~~~~~~~~~~~----~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~ 75 (341)
T cd08237 1 MINQVYRLVRPKF----FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPT 75 (341)
T ss_pred CcccceEEeccce----EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCC
Confidence 3568899987654 9999999985 999999999999999999999998753211 125799999999999999876
Q ss_pred CCCCCCCCCEEEEEc------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 84 EVKNFKVGDKVVAVL------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 84 ~~~~~~~Gd~V~~~~------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
+ .|++||||+..+ .+|+|+||+++++++++++|+++++++|+.+ .+++++|++
T Consensus 76 ~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a 152 (341)
T cd08237 76 G--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHA 152 (341)
T ss_pred C--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHH
Confidence 4 799999998642 2488999999999999999999999887755 477899999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh-CC-CeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL-GN-THVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPS 216 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~-~g-~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~ 216 (327)
+.+..+. ..++|++|||.| +|++|++++|++++ .| .+|+++++ ++|++.++..+++..++. ...
T Consensus 153 ~~~~~~~---~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~---------~~~ 219 (341)
T cd08237 153 ISRFEQI---AHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD---------IPE 219 (341)
T ss_pred HHHHhhc---CCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh---------hhh
Confidence 8553322 117899999999 69999999999986 55 48888874 578888887666543321 011
Q ss_pred CCcccEEEeCCCCC----cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314 217 GRKYDAVINCVTGI----PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG 292 (327)
Q Consensus 217 ~~~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 292 (327)
..++|++||++|++ .+..++++++++|+++.+|.... ...+....+..+++++.+.. ....+++++++++++++
T Consensus 220 ~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~-~~~~~~~~~~~~~~~~~ 297 (341)
T cd08237 220 DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSS-RSTREDFERAVELLSRN 297 (341)
T ss_pred ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC-CcccCHHHHhhCceEEEEec-ccCHHHHHHHHHHHHhC
Confidence 23699999999953 37889999999999999986432 22334445667888888743 34567899999999998
Q ss_pred -----ceeEecceeeccc---cHHHHHHHHhcCCCCccEEEeC
Q 020314 293 -----KLKTVIDSKHSLS---KAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 293 -----~l~~~~~~~~~~~---~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.++++++++|+++ ++.++++.+.++ ..||+|+++
T Consensus 298 ~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 298 PEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred CcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 4777888999986 455555555444 679999864
No 32
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2e-42 Score=306.35 Aligned_cols=305 Identities=24% Similarity=0.261 Sum_probs=246.2
Q ss_pred ceEEEEEecc--CC-CccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314 6 VMHAVQYDSY--GG-GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG 82 (327)
Q Consensus 6 ~~~a~~~~~~--g~-~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 82 (327)
+||+|++.++ |. +++.+++++.+.|+|.++||+|||.++|||+.|.+.... ...+|.++|+|++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~------~~~~p~v~G~e~~G~V~~-- 73 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR------LNEGDTMIGTQVAKVIES-- 73 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc------CCCCCcEecceEEEEEec--
Confidence 6999999993 44 348899999999999999999999999999987653211 114578999999999985
Q ss_pred CCCCCCCCCCEEEEEccCcccceeEeecCC---ceeeCCCCCC-----hhhhcccCchHHHHHHHHHHhhCCccCCCCCC
Q 020314 83 SEVKNFKVGDKVVAVLSGGGLAEFAVAKES---LTVARPQEVS-----AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQ 154 (327)
Q Consensus 83 ~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~---~~~~ip~~~~-----~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~ 154 (327)
.++++++||||++. ++|++|.+++.+ .++++|++++ ...+++++.++.|||+++.+..++ ++|
T Consensus 74 -~~~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~-----~~g 144 (329)
T cd08294 74 -KNSKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKP-----KAG 144 (329)
T ss_pred -CCCCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCC-----CCC
Confidence 45689999999984 589999999999 9999999988 233356788999999999888888 899
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCCCcc
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTGIPW 232 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~~ 232 (327)
++|||+|++|++|++++|+|+.+|++|+++++ +++.+.++++|++.++++.+.+. +.++...++++|++||++|++.+
T Consensus 145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~~~ 224 (329)
T cd08294 145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFS 224 (329)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHHHH
Confidence 99999999999999999999999999998885 47888999999999999876552 22222233689999999999778
Q ss_pred cccccccCCCcEEEeecCCchh----H--HHHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCceeEecceee
Q 020314 233 STFEPNLGTTGKVIDFNPSPRV----L--LTFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKTVIDSKH 302 (327)
Q Consensus 233 ~~~~~~l~~~G~~v~~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~ 302 (327)
..++++++++|+++.+|..... . .......+.++++++.++.... ..+.++++++++++|++++.+...|
T Consensus 225 ~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~ 304 (329)
T cd08294 225 STVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTE 304 (329)
T ss_pred HHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence 9999999999999998743210 0 0112334566777777643321 1345778999999999987666779
Q ss_pred ccccHHHHHHHHhcCCCCccEEEeC
Q 020314 303 SLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 303 ~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++++++|++.+.+++..||+|+++
T Consensus 305 ~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 305 GFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred CHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 9999999999999999999999875
No 33
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.9e-42 Score=307.86 Aligned_cols=306 Identities=25% Similarity=0.325 Sum_probs=251.4
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCC--------CCCCCCeeecccceEEE
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF--------LPRKFPFIPASDVAGEV 78 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~--------~~~~~p~~~G~e~~G~V 78 (327)
||||++.++++ +++++.+.|++.++||+||+.++++|++|++...+..... ....+|.++|||++|+|
T Consensus 1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V 76 (351)
T cd08233 1 MKAARYHGRKD----IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV 76 (351)
T ss_pred CceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence 79999987554 8999999999999999999999999999998765431100 11236889999999999
Q ss_pred EecCCCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314 79 IGLGSEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP 130 (327)
Q Consensus 79 ~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~ 130 (327)
+++|++++++++||+|++.. .+|+|++|+.++.+.++++|+++++++++.+
T Consensus 77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~- 155 (351)
T cd08233 77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV- 155 (351)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence 99999999999999998632 1589999999999999999999999998766
Q ss_pred chHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCCC
Q 020314 131 CAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTPD 208 (327)
Q Consensus 131 ~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~ 208 (327)
.++.+||+++ ...++ +++++|+|+| +|++|++++|+|+.+|+ +|+++++ +++.++++++|++.++++.+.+
T Consensus 156 ~~~~ta~~~l-~~~~~-----~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~ 228 (351)
T cd08233 156 EPLAVAWHAV-RRSGF-----KPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVD 228 (351)
T ss_pred cHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccC
Confidence 6778999999 77777 8999999998 69999999999999999 7888874 4678888899999999887655
Q ss_pred --cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHH
Q 020314 209 --GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL 285 (327)
Q Consensus 209 --~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
..+.+.+.++++|++||++|+. .+..++++++++|+++.+|.... ...+....+..+++++.+.. ....++++++
T Consensus 229 ~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~ 306 (351)
T cd08233 229 VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK-PISFNPNDLVLKEKTLTGSI-CYTREDFEEV 306 (351)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC-CCccCHHHHHhhCcEEEEEe-ccCcchHHHH
Confidence 2234455666799999999854 58889999999999999986542 23344455566777777743 3346789999
Q ss_pred HHHHHCCcee--EecceeeccccH-HHHHHHHhcCCCC-ccEEEe
Q 020314 286 VKLVKEGKLK--TVIDSKHSLSKA-EDAWAKSISGRAT-GKIIVE 326 (327)
Q Consensus 286 ~~~~~~g~l~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gkvvv~ 326 (327)
++++++++++ +.+.++|+++|+ ++|++.+.+++.. ||+|+.
T Consensus 307 ~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 307 IDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred HHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999999995 467789999996 7899999999875 999873
No 34
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3.7e-42 Score=305.49 Aligned_cols=309 Identities=25% Similarity=0.284 Sum_probs=245.2
Q ss_pred eEEEEEeccCCCccceEEeeccC----CCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccc--eEEEEe
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPV----PTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDV--AGEVIG 80 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~----~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~ 80 (327)
+|+|... ++++++|++++.++ |+|.++||||||+++|||+.|++...|.+.. ...+|.++|++. .|++..
T Consensus 8 ~~~~~~~--~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~ 83 (338)
T cd08295 8 LKAYVTG--FPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKV 83 (338)
T ss_pred EecCCCC--CCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEE
Confidence 5566642 33467899999888 7799999999999999999999999885431 114577888754 455556
Q ss_pred cCCCCCCCCCCCEEEEEccCcccceeEeecC-CceeeCC-CCCChh-hhcccCchHHHHHHHHHHhhCCccCCCCCCCeE
Q 020314 81 LGSEVKNFKVGDKVVAVLSGGGLAEFAVAKE-SLTVARP-QEVSAA-EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNI 157 (327)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~v 157 (327)
+|++++++++||+|+++ |+|+||+++++ ..++++| +++++. +++.+++++.|||+++.+..++ ++|++|
T Consensus 84 v~~~v~~~~vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~-----~~g~~V 155 (338)
T cd08295 84 VDSGNPDFKVGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKP-----KKGETV 155 (338)
T ss_pred EecCCCCCCCCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCC-----CCCCEE
Confidence 77888899999999975 69999999999 7999995 678876 7999999999999999877888 899999
Q ss_pred EEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHh-cCCCEEEeCCCC-C-cccccCCCCCcccEEEeCCCCCccc
Q 020314 158 LITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKS-LGADEVLDYKTP-D-GAALKSPSGRKYDAVINCVTGIPWS 233 (327)
Q Consensus 158 lV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~-lg~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~ 233 (327)
||+|++|++|++++|+|+.+|++|+++++ +++.+.+++ +|++.++++.+. + .+.+....++++|++||++|+..+.
T Consensus 156 lI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~ 235 (338)
T cd08295 156 FVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLD 235 (338)
T ss_pred EEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHH
Confidence 99999999999999999999999998885 467888887 999999986543 3 2222222236899999999987789
Q ss_pred ccccccCCCcEEEeecCCchhHH-----HHhhhhccccceeeEEEEeCCC----HHHHHHHHHHHHCCceeEecceeecc
Q 020314 234 TFEPNLGTTGKVIDFNPSPRVLL-----TFAWKKLTFSKKQLVPFSVSPK----GENLDFLVKLVKEGKLKTVIDSKHSL 304 (327)
Q Consensus 234 ~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~ 304 (327)
.++++++++|+++.+|....... ......+.+++.++.++..... .+.++++++++.+|++++.+...|++
T Consensus 236 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l 315 (338)
T cd08295 236 AVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGL 315 (338)
T ss_pred HHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCH
Confidence 99999999999999985432111 1122345566666666433221 34578899999999998877677999
Q ss_pred ccHHHHHHHHhcCCCCccEEEeC
Q 020314 305 SKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 305 ~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++++|++.+++++..||+|+++
T Consensus 316 ~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 316 ESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHhcCCCCceEEEEC
Confidence 99999999999999999999874
No 35
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=4.9e-42 Score=305.77 Aligned_cols=302 Identities=19% Similarity=0.244 Sum_probs=246.2
Q ss_pred EEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCC
Q 020314 10 VQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFK 89 (327)
Q Consensus 10 ~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 89 (327)
|++.+++++ +++++.+.|.+.++||+||+.++|+|++|++.+.+.+.+ ...+|.++|||++|+|+++|++++.+
T Consensus 2 ~~~~~~g~~---~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~- 75 (349)
T TIGR03201 2 WMMTEPGKP---MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT--NHALPLALGHEISGRVIQAGAGAASW- 75 (349)
T ss_pred ceEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCc--cCCCCeeccccceEEEEEeCCCcCCC-
Confidence 567777654 888999999999999999999999999999987544321 12568999999999999999999887
Q ss_pred CCCEEEEEc---------------------------cCcccceeEeecCCceeeCCC------CCChhhhcccCchHHHH
Q 020314 90 VGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQ------EVSAAEGAGIPCAGLTA 136 (327)
Q Consensus 90 ~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~------~~~~~~aa~~~~~~~ta 136 (327)
+||||+... .+|+|++|+.++++.++++|+ ++++++++.+++++.++
T Consensus 76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta 155 (349)
T TIGR03201 76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP 155 (349)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence 999998621 258999999999999999999 89999999999999999
Q ss_pred HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC-----cc
Q 020314 137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD-----GA 210 (327)
Q Consensus 137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~-----~~ 210 (327)
|+++. ..++ +++++|+|+|+ |++|++++++|++.|++|+++++ ++|++.++++|++.++++.+.+ ..
T Consensus 156 ~~a~~-~~~~-----~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~ 228 (349)
T TIGR03201 156 YQAAV-QAGL-----KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKL 228 (349)
T ss_pred HHHHH-hcCC-----CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHH
Confidence 99985 4666 88999999997 99999999999999999988874 5788899999999998876542 12
Q ss_pred cccCCCCCccc----EEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHH
Q 020314 211 ALKSPSGRKYD----AVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL 285 (327)
Q Consensus 211 ~~~~~~~~~~d----~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
+.+.+.++++| ++|||+|+.. +..++++++++|+++.+|..... ..+....+..+..++.+.+ ....++++++
T Consensus 229 ~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~ 306 (349)
T TIGR03201 229 IKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNW-GCPPDRYPAA 306 (349)
T ss_pred HHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEe-cCCHHHHHHH
Confidence 33345666776 8999999765 77889999999999999965432 2223334444555666633 3356789999
Q ss_pred HHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 286 VKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 286 ~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++++++|++++ ++ +.|+++|+++||+.+++++..||+++++
T Consensus 307 ~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 307 LDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred HHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 99999999864 44 4799999999999999999899999864
No 36
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=4.6e-42 Score=303.38 Aligned_cols=302 Identities=23% Similarity=0.248 Sum_probs=243.6
Q ss_pred EEEEEeccC---CCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 8 HAVQYDSYG---GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 8 ~a~~~~~~g---~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
|.|++.+.. ..++.+++++.+.|+|.+|||+|||.++|+|+.|+. |.++. ...|.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~---~~~~~i~G~~~~g~v~~~~~- 74 (325)
T TIGR02825 2 KTWTLKKHFVGYPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRL---KEGDTMMGQQVARVVESKNV- 74 (325)
T ss_pred cEEEEecCCCCCCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcC---CCCCcEecceEEEEEEeCCC-
Confidence 556776532 236779999999999999999999999999996543 33321 13478999999999999763
Q ss_pred CCCCCCCCEEEEEccCcccceeEeecCCceeeC----CCCCChhhh-cccCchHHHHHHHHHHhhCCccCCCCCCCeEEE
Q 020314 85 VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVAR----PQEVSAAEG-AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI 159 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV 159 (327)
++++||||+++ ++|++|..++.+.+.++ |++++++++ +++++++.|||+++.+..++ ++|++|||
T Consensus 75 --~~~~GdrV~~~---~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~-----~~g~~VLI 144 (325)
T TIGR02825 75 --ALPKGTIVLAS---PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGV-----KGGETVMV 144 (325)
T ss_pred --CCCCCCEEEEe---cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCC-----CCCCEEEE
Confidence 69999999985 47999999999888777 899999987 68899999999999888888 89999999
Q ss_pred EcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCC-C-cccccCCCCCcccEEEeCCCCCcccccc
Q 020314 160 TAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTP-D-GAALKSPSGRKYDAVINCVTGIPWSTFE 236 (327)
Q Consensus 160 ~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~ 236 (327)
+|++|++|++++|+|+..|++|+++++ +++.+.++++|++.++++++. + .+..+...++++|++||++|++.+..++
T Consensus 145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~ 224 (325)
T TIGR02825 145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVI 224 (325)
T ss_pred eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHH
Confidence 999999999999999999999998885 478888899999999998764 3 2333333456899999999988889999
Q ss_pred cccCCCcEEEeecCCchh----HHH--HhhhhccccceeeEEEEeC-C----CHHHHHHHHHHHHCCceeEecceeeccc
Q 020314 237 PNLGTTGKVIDFNPSPRV----LLT--FAWKKLTFSKKQLVPFSVS-P----KGENLDFLVKLVKEGKLKTVIDSKHSLS 305 (327)
Q Consensus 237 ~~l~~~G~~v~~g~~~~~----~~~--~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 305 (327)
++++++|+++.+|..... ... .....+.++.+++.++... . ..+.++++++++++|++++.+...|+++
T Consensus 225 ~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~ 304 (325)
T TIGR02825 225 GQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFE 304 (325)
T ss_pred HHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHH
Confidence 999999999999854321 011 1233455667777665421 1 2457889999999999988776789999
Q ss_pred cHHHHHHHHhcCCCCccEEEe
Q 020314 306 KAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 306 ~~~~a~~~~~~~~~~gkvvv~ 326 (327)
++++|++.+++++..||+|++
T Consensus 305 ~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 305 NMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHhcCCCCCeEEeC
Confidence 999999999999999999974
No 37
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=6.3e-42 Score=305.08 Aligned_cols=313 Identities=21% Similarity=0.214 Sum_probs=236.5
Q ss_pred eEEEEEeccC-----CCccceEEeeccCCCCC-CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314 7 MHAVQYDSYG-----GGVAGLKHVEVPVPTPN-KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80 (327)
Q Consensus 7 ~~a~~~~~~g-----~~~~~l~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~ 80 (327)
.|.+++.+.. ..++.+++++.+.|+|. ++||+|||.++|||+.|+..............+|.++|||++|+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~ 82 (345)
T cd08293 3 NKRVVLNSRPGKNGNPVAENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVV 82 (345)
T ss_pred ceEEEEecccCCCCCCCccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEE
Confidence 4667776533 12577999999999874 99999999999999999654322111000124678999999999999
Q ss_pred cCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhh----hcccCchHHHHHHHHHHhhCCccCCCCCC--
Q 020314 81 LGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAE----GAGIPCAGLTAHQALTQSLGVKLDGSGQQ-- 154 (327)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~----aa~~~~~~~ta~~al~~~~~~~~~~~~~~-- 154 (327)
+|++++++++||||++. .++|++|++++++.++++|+++++++ +++++.++.|||+++.+..++ +++
T Consensus 83 vG~~v~~~~~Gd~V~~~--~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~-----~~g~~ 155 (345)
T cd08293 83 EESKHQKFAVGDIVTSF--NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI-----TPGAN 155 (345)
T ss_pred eccCCCCCCCCCEEEec--CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccC-----CCCCC
Confidence 99999999999999874 26899999999999999999864332 456778899999999777777 655
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHh-cCCCEEEeCCCCCc-c-cccCCCCCcccEEEeCCCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKS-LGADEVLDYKTPDG-A-ALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~-lg~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~ 229 (327)
++|||+|++|++|++++|+|+++|+ +|++++++ ++.+.+++ +|++.++++.+.+. + +.+.+ ++++|++||++|+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~-~~gvd~vid~~g~ 234 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELC-PEGVDVYFDNVGG 234 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHC-CCCceEEEECCCc
Confidence 9999999999999999999999999 89999854 67777765 99999998876552 2 33333 3689999999998
Q ss_pred CcccccccccCCCcEEEeecCCchh--HH----HH--hhhhcc-ccceeeEEEEeCC----CHHHHHHHHHHHHCCceeE
Q 020314 230 IPWSTFEPNLGTTGKVIDFNPSPRV--LL----TF--AWKKLT-FSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKT 296 (327)
Q Consensus 230 ~~~~~~~~~l~~~G~~v~~g~~~~~--~~----~~--~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~ 296 (327)
+.+..++++++++|+++.+|..... .. .. ....+. .+......+.... ..+.++.++++++++.+++
T Consensus 235 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~ 314 (345)
T cd08293 235 EISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKV 314 (345)
T ss_pred HHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccc
Confidence 8788999999999999998842210 00 00 000011 1122221211111 1345778889999999987
Q ss_pred ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 297 VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 297 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.....++++++++|++.+.+++..||+|+++
T Consensus 315 ~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 315 KETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred eeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 6556679999999999999999899999875
No 38
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=7.1e-42 Score=309.65 Aligned_cols=318 Identities=26% Similarity=0.288 Sum_probs=257.6
Q ss_pred CccceEEEEEe--ccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC-C-----CCC-CCCeeeccc
Q 020314 3 GKAVMHAVQYD--SYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP-F-----LPR-KFPFIPASD 73 (327)
Q Consensus 3 ~~~~~~a~~~~--~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~-----~~~-~~p~~~G~e 73 (327)
+|.+|||+++. ++|.+.+.+++++.+.|++.++||+||+.++|+|++|++...|.... + .+. ..+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 68999999986 34543456899999999999999999999999999999987775210 0 000 123588999
Q ss_pred ceEEEEecCCCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhh
Q 020314 74 VAGEVIGLGSEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAE 125 (327)
Q Consensus 74 ~~G~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~ 125 (327)
++|+|+++|++++.+++||+|++.+ .+|+|++|++++...++++|+++++++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~ 168 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE 168 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 9999999999999999999998864 248999999999999999999999999
Q ss_pred hcccCchHHHHHHHHHHh--hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEE
Q 020314 126 GAGIPCAGLTAHQALTQS--LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVL 202 (327)
Q Consensus 126 aa~~~~~~~ta~~al~~~--~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~ 202 (327)
++.+++++.|||+++... +++ +++++|+|+|++|++|++++++|+++|++++++++ +++.+.++++|++.++
T Consensus 169 aa~l~~~~~tA~~al~~~~~~~~-----~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i 243 (393)
T cd08246 169 AAAYMLVGATAYRMLFGWNPNTV-----KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVI 243 (393)
T ss_pred HhhhcccHHHHHHHHhhcccccC-----CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEE
Confidence 999999999999998654 566 78999999998899999999999999999888775 4788888999999988
Q ss_pred eCCCCC------------------------cccccCCCCC-cccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHH
Q 020314 203 DYKTPD------------------------GAALKSPSGR-KYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLT 257 (327)
Q Consensus 203 ~~~~~~------------------------~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 257 (327)
++++.+ ..+.+.++++ ++|++||++|+..+..++++++++|+++.+|........
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 323 (393)
T cd08246 244 NRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHT 323 (393)
T ss_pred cccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCC
Confidence 864421 1122345555 899999999987788999999999999999854322122
Q ss_pred HhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcC-CCCccEEEe
Q 020314 258 FAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISG-RATGKIIVE 326 (327)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~ 326 (327)
+....+..++.++.+. .....+.++.++++++++.+.+.+.+.|++++++++++.+.++ +..||+++-
T Consensus 324 ~~~~~l~~~~~~i~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 324 YDNRYLWMRQKRIQGS-HFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred CcHHHHhhheeEEEec-ccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 2333444566666653 3345678889999999999988777899999999999999998 788999863
No 39
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.1e-41 Score=303.48 Aligned_cols=306 Identities=24% Similarity=0.320 Sum_probs=252.2
Q ss_pred EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314 8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87 (327)
Q Consensus 8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 87 (327)
|++++.++++ .+++++.+.|.+.++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 75 (361)
T cd08231 2 RAAVLTGPGK---PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTT 75 (361)
T ss_pred eEEEEcCCCC---CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCccc
Confidence 7899998874 3999999999999999999999999999999999887641 257889999999999999999986
Q ss_pred ------CCCCCEEEEEc----------------------------------cCcccceeEeecCC-ceeeCCCCCChhhh
Q 020314 88 ------FKVGDKVVAVL----------------------------------SGGGLAEFAVAKES-LTVARPQEVSAAEG 126 (327)
Q Consensus 88 ------~~~Gd~V~~~~----------------------------------~~g~~a~~~~~~~~-~~~~ip~~~~~~~a 126 (327)
+++||+|++.. ..|+|++|+.++++ .++++|++++..++
T Consensus 76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a 155 (361)
T cd08231 76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA 155 (361)
T ss_pred cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence 99999998862 25899999999996 79999999999999
Q ss_pred cccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeC
Q 020314 127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDY 204 (327)
Q Consensus 127 a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~ 204 (327)
+.+++++.|||+++.+.... +++++|||+| +|++|++++++|+.+|+ +|++++++ ++.++++++|++.++++
T Consensus 156 a~~~~~~~ta~~al~~~~~~-----~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 229 (361)
T cd08231 156 APANCALATVLAALDRAGPV-----GAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDI 229 (361)
T ss_pred HHhcCHHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcC
Confidence 99989999999999766555 6899999997 79999999999999999 89888854 67788899999998887
Q ss_pred CCCCc-----ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCch-hHHHHhhhhccccceeeEEEEeCC
Q 020314 205 KTPDG-----AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR-VLLTFAWKKLTFSKKQLVPFSVSP 277 (327)
Q Consensus 205 ~~~~~-----~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 277 (327)
+..+. .+.+.++++++|++|||+|+. .+..++++++++|+++.+|.... ....+....+.+++..+.+.. ..
T Consensus 230 ~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 308 (361)
T cd08231 230 DELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVH-NY 308 (361)
T ss_pred cccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcc-cC
Confidence 65431 244556677899999999864 48889999999999999986432 112233334566677666643 33
Q ss_pred CHHHHHHHHHHHHCC--c--eeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 278 KGENLDFLVKLVKEG--K--LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 278 ~~~~~~~~~~~~~~g--~--l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.++.++++++++..+ . +.+++.++|+++++++||+.+.+++. +|+|+.+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 309 DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 566788899999887 3 44577889999999999999988774 7999875
No 40
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=7.2e-42 Score=302.47 Aligned_cols=307 Identities=25% Similarity=0.334 Sum_probs=242.0
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCe-eecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPF-IPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~~ 85 (327)
|+++++...+.. .++++.+.|.+.|+||+|||.++|||++|++.++|..+.. ..|. ++|||++|+|+++| .+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~---~~~~~i~GHE~~G~V~evG-~~ 73 (350)
T COG1063 1 MKAAVVYVGGGD---VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV---PPGDIILGHEFVGEVVEVG-VV 73 (350)
T ss_pred CceeEEEecCCc---cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC---CCCCcccCccceEEEEEec-cc
Confidence 567777665542 3366666666889999999999999999999999975422 3344 99999999999999 77
Q ss_pred CCCCCCCEEEEEc--------------------------------cCcccceeEeecCCceee-CCCCCChhhhcccCch
Q 020314 86 KNFKVGDKVVAVL--------------------------------SGGGLAEFAVAKESLTVA-RPQEVSAAEGAGIPCA 132 (327)
Q Consensus 86 ~~~~~Gd~V~~~~--------------------------------~~g~~a~~~~~~~~~~~~-ip~~~~~~~aa~~~~~ 132 (327)
+.+++||||+..+ .+|+|+||+++|.++.++ +|+++ +.+++++..+
T Consensus 74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~ep 152 (350)
T COG1063 74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEP 152 (350)
T ss_pred cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcCh
Confidence 8899999998765 258999999999765555 57888 6667777778
Q ss_pred HHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHHh-cCCCEEEeCCCCC-
Q 020314 133 GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVKS-LGADEVLDYKTPD- 208 (327)
Q Consensus 133 ~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~~-lg~~~v~~~~~~~- 208 (327)
+.++|++....... +++.+|+|.| +|++|++++++++.+|+ +|++++ +++|++++++ .+++.+++...++
T Consensus 153 la~~~~~~a~~~~~-----~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~ 226 (350)
T COG1063 153 LATAYHGHAERAAV-----RPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDA 226 (350)
T ss_pred hhhhhhhhhhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccH
Confidence 88998775445444 5556999999 89999999999999998 677776 4589999988 6666666554433
Q ss_pred -cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314 209 -GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV 286 (327)
Q Consensus 209 -~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
....+.+.+.++|++|||+|... +..++++++++|+++.+|........+....+..+++++.+.........++.++
T Consensus 227 ~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~ 306 (350)
T COG1063 227 GAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERAL 306 (350)
T ss_pred HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHH
Confidence 23456677789999999999655 8899999999999999997654422445567778888888853345667899999
Q ss_pred HHHHCCceeE--ecceeeccccHHHHHHHHhcCCC-CccEEEeC
Q 020314 287 KLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRA-TGKIIVEP 327 (327)
Q Consensus 287 ~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~ 327 (327)
+++++|++++ ++++.+++++++++++.+.+.+. ..|+++.+
T Consensus 307 ~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 307 DLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred HHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999999864 66788999999999999998655 55888864
No 41
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.1e-41 Score=299.89 Aligned_cols=313 Identities=30% Similarity=0.433 Sum_probs=255.8
Q ss_pred eEEEEEeccCCCccceEEee-ccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC-----------------CCCCCCCe
Q 020314 7 MHAVQYDSYGGGVAGLKHVE-VPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP-----------------FLPRKFPF 68 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~-~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-----------------~~~~~~p~ 68 (327)
||++++...+. ++.+.+.+ .+.|.+.+++|+||+.++++|++|++...|.++. .....+|.
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (350)
T cd08274 1 MRAVLLTGHGG-LDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR 79 (350)
T ss_pred CeEEEEeccCC-ccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence 68999987765 45566654 4677789999999999999999999988876431 01235688
Q ss_pred eecccceEEEEecCCCCCCCCCCCEEEEEc-------------------cCcccceeEeecCCceeeCCCCCChhhhccc
Q 020314 69 IPASDVAGEVIGLGSEVKNFKVGDKVVAVL-------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGI 129 (327)
Q Consensus 69 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~ 129 (327)
++|||++|+|+++|++++++++||||++.+ .+|++++|+.++...++++|+++++.+++.+
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l 159 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF 159 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence 999999999999999999999999998742 2489999999999999999999999999999
Q ss_pred CchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc
Q 020314 130 PCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDG 209 (327)
Q Consensus 130 ~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 209 (327)
++++.|||+++ ...++ +++++|||+|++|++|++++++|+++|+++++++++++++.++++|++.+++......
T Consensus 160 ~~~~~ta~~~~-~~~~~-----~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (350)
T cd08274 160 PCSYSTAENML-ERAGV-----GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLL 233 (350)
T ss_pred ccHHHHHHHHH-hhcCC-----CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccH
Confidence 99999999998 67777 8999999999889999999999999999999888666788888999876665443332
Q ss_pred ccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHH
Q 020314 210 AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLV 289 (327)
Q Consensus 210 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (327)
.....+.++++|++||++|++.+..++++++++|+++.+|........+....+..++..+.+.. ....+.++++++++
T Consensus 234 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 312 (350)
T cd08274 234 ADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGST-LGTREVFRRLVRYI 312 (350)
T ss_pred HHHHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEee-cCCHHHHHHHHHHH
Confidence 11445567789999999998888999999999999999985422212223333345555665533 34567899999999
Q ss_pred HCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 290 KEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 290 ~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++++++.+.+.|++++++++++.+.++...||+++.+
T Consensus 313 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 313 EEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 99999887788999999999999999988889999875
No 42
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=5.1e-41 Score=293.04 Aligned_cols=317 Identities=38% Similarity=0.518 Sum_probs=253.9
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCC-CCCCCeee---cccceEEEEe
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFL-PRKFPFIP---ASDVAGEVIG 80 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~-~~~~p~~~---G~e~~G~V~~ 80 (327)
++++.+.+..+.++.+....++.++|.|.+++++|++.++++|+.|+.++.|.+.+.. ...+|.+. |.+.+|.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~ 82 (347)
T KOG1198|consen 3 KKIRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVES 82 (347)
T ss_pred cccceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEec
Confidence 3455666666655566777788999999999999999999999999999999876432 12567444 4444455566
Q ss_pred cC-CCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhh------CCccCCCCC
Q 020314 81 LG-SEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSL------GVKLDGSGQ 153 (327)
Q Consensus 81 vG-~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~------~~~~~~~~~ 153 (327)
.| ..+..+..||++......|+|+||.++|...++++|+++++++||.++.++.|||.++.... ++ ++
T Consensus 83 ~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~-----~~ 157 (347)
T KOG1198|consen 83 VGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKL-----SK 157 (347)
T ss_pred cccccccceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccccccccc-----CC
Confidence 66 44567889999888889999999999999999999999999999999999999999998888 77 89
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCcHHHHHhcCCCEEEeCCCCCc-c-cccCCCCCcccEEEeCCCCC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGN-THVTATCGARNIELVKSLGADEVLDYKTPDG-A-ALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~~ 230 (327)
|++|||+||+|++|++++|+|++.| ++|+++++.++.++++++|++.++|+++.+. + ..+.+ +.+||+||||+|+.
T Consensus 158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGGS 236 (347)
T ss_pred CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCCC
Confidence 9999999999999999999999999 5788888899999999999999999999772 3 33444 78999999999998
Q ss_pred cccccccccCCCcEEEeecCCchhHHHH------------hhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEec
Q 020314 231 PWSTFEPNLGTTGKVIDFNPSPRVLLTF------------AWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVI 298 (327)
Q Consensus 231 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 298 (327)
.......++...|+...++......... .......+.............+.++.+.++++.++|++.+
T Consensus 237 ~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i 316 (347)
T KOG1198|consen 237 TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVI 316 (347)
T ss_pred ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCc
Confidence 8888888888888654443211100000 0111112222222223456788999999999999999999
Q ss_pred ceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 299 DSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 299 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.+.||++++++|++.+.++...||+++++
T Consensus 317 ~~~~p~~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 317 DSVYPFSQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred ceeeeHHHHHHHHHHHhhcCCcceEEEEe
Confidence 99999999999999999999999999864
No 43
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=4.4e-41 Score=304.60 Aligned_cols=319 Identities=24% Similarity=0.264 Sum_probs=258.3
Q ss_pred CccceEEEEEec--cCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC-------CCCCCCC-eeecc
Q 020314 3 GKAVMHAVQYDS--YGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP-------FLPRKFP-FIPAS 72 (327)
Q Consensus 3 ~~~~~~a~~~~~--~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-------~~~~~~p-~~~G~ 72 (327)
.|++||||++.. ++++++.+++.+.+.|.+.++||+||+.++++|..|.+...+.... +.+...| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 478899999965 7776678999999999999999999999999999998876664210 0011233 37999
Q ss_pred cceEEEEecCCCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChh
Q 020314 73 DVAGEVIGLGSEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAA 124 (327)
Q Consensus 73 e~~G~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~ 124 (327)
|++|+|+++|++++.+++||+|++.+ .+|+|++|+.++.+.++++|++++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~ 163 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE 163 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence 99999999999999999999998854 25899999999999999999999999
Q ss_pred hhcccCchHHHHHHHHHH--hhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEE
Q 020314 125 EGAGIPCAGLTAHQALTQ--SLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEV 201 (327)
Q Consensus 125 ~aa~~~~~~~ta~~al~~--~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v 201 (327)
+++.+..++.+||+++.. ..++ .++++|+|+|++|++|++++++|+++|++++++++ +++.+.++++|++.+
T Consensus 164 ~aa~~~~~~~ta~~al~~~~~~~~-----~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~ 238 (398)
T TIGR01751 164 EAACPGLTGATAYRQLVGWNPATV-----KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAV 238 (398)
T ss_pred HHhhccchHHHHHHHHhhhhccCC-----CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEE
Confidence 999999999999999854 3556 78999999998899999999999999999887764 467888889999999
Q ss_pred EeCCCCC------------------------cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHH
Q 020314 202 LDYKTPD------------------------GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLT 257 (327)
Q Consensus 202 ~~~~~~~------------------------~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 257 (327)
+|+++.+ ..+.+.+.++++|++|||+|...+..++++++++|+++.+|........
T Consensus 239 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 318 (398)
T TIGR01751 239 IDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHD 318 (398)
T ss_pred ecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCC
Confidence 9875421 0122334557899999999987788999999999999999865432222
Q ss_pred HhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 258 FAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+....+..++..+.+ +.....+++++++++++++++.+.+.+++++++++++++.+.++...||+|+.+
T Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 319 YDNRYLWMRQKRIQG-SHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred cCHHHHhhcccEEEc-cccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEe
Confidence 223333445555555 223345567889999999999887888999999999999999999999999853
No 44
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=8e-41 Score=296.36 Aligned_cols=302 Identities=26% Similarity=0.387 Sum_probs=251.8
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.+++.. +++++.+.|++.++||+||+.++++|++|++.+.|..+. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~ 74 (333)
T cd08296 1 YKAVQVTEPGGP---LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVS 74 (333)
T ss_pred CeEEEEccCCCC---ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCc
Confidence 799999887433 899999999999999999999999999999998886531 25678999999999999999999
Q ss_pred CCCCCCEEEEE----------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314 87 NFKVGDKVVAV----------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138 (327)
Q Consensus 87 ~~~~Gd~V~~~----------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 138 (327)
++++||+|++. ..+|++++|+.++...++++|+++++.+++.+++++.++|+
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 154 (333)
T cd08296 75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN 154 (333)
T ss_pred cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence 99999999862 12589999999999999999999999999999999999999
Q ss_pred HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCC
Q 020314 139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPS 216 (327)
Q Consensus 139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~ 216 (327)
++... ++ .++++|||+| +|++|++++++|+++|++++++++. ++++.++++|++.++++.+.+. ..+...
T Consensus 155 ~~~~~-~~-----~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~- 226 (333)
T cd08296 155 ALRNS-GA-----KPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL- 226 (333)
T ss_pred HHHhc-CC-----CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc-
Confidence 98544 77 8899999999 8999999999999999999988854 6888889999999988766542 222222
Q ss_pred CCcccEEEeCCC-CCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314 217 GRKYDAVINCVT-GIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295 (327)
Q Consensus 217 ~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 295 (327)
+++|+++|++| +..+..++++++++|+++.+|.... ...+....+..++.++.+.. ......++.+++++++++++
T Consensus 227 -~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~l~ 303 (333)
T cd08296 227 -GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE-PVAVSPLQLIMGRKSIHGWP-SGTALDSEDTLKFSALHGVR 303 (333)
T ss_pred -CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC-CCCcCHHHHhhcccEEEEeC-cCCHHHHHHHHHHHHhCCCC
Confidence 36999999987 4558889999999999999986542 12233334446677777743 34567888999999999988
Q ss_pred EecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 296 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
+.+ ..|+++++.+||+.+.+++..||+|++
T Consensus 304 ~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 304 PMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 765 589999999999999999999999874
No 45
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=5.8e-41 Score=298.47 Aligned_cols=315 Identities=27% Similarity=0.341 Sum_probs=255.3
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCC-CeEEEEEeEEeeChhhHHHHhcCCCCCCC--CCCCeeecccceEEEEecCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNK-DEALLKVEAASINPIDWKLQKGMLRPFLP--RKFPFIPASDVAGEVIGLGS 83 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~-~eV~V~v~~~~i~~~d~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~ 83 (327)
||||++.+++.+++.+.+++.+.|++.+ ++|+||+.++|+|+.|++...|..+...+ ...|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 7999999988766778999999998887 99999999999999999998887542110 12577899999999999999
Q ss_pred CCCCCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcC
Q 020314 84 EVKNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAA 162 (327)
Q Consensus 84 ~~~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~ 162 (327)
+++.+++||+|++.. ..|+|++|..++.+.++++|+++++++++.+++.+.|+|+++....++ +++++|||+|+
T Consensus 81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~g~~vlI~g~ 155 (341)
T cd08290 81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKL-----QPGDWVIQNGA 155 (341)
T ss_pred CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhccc-----CCCCEEEEccc
Confidence 999999999999864 369999999999999999999999999999999999999999777777 89999999999
Q ss_pred CChHHHHHHHHHHhCCCeEEEEecC-----CcHHHHHhcCCCEEEeCCCC---C-cc-cccCCCCCcccEEEeCCCCCcc
Q 020314 163 SGAVGLYAVQLAKLGNTHVTATCGA-----RNIELVKSLGADEVLDYKTP---D-GA-ALKSPSGRKYDAVINCVTGIPW 232 (327)
Q Consensus 163 ~g~~G~~~~~la~~~g~~v~~~~~~-----~~~~~~~~lg~~~v~~~~~~---~-~~-~~~~~~~~~~d~v~d~~g~~~~ 232 (327)
+|++|++++++|++.|+++++++++ ++.+.++++|++.+++++.. + .. +.....+ ++|++|||+|+...
T Consensus 156 ~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~ 234 (341)
T cd08290 156 NSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGKSA 234 (341)
T ss_pred hhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcHhH
Confidence 9999999999999999999988854 45777788999999887654 3 12 2233444 79999999998777
Q ss_pred cccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-----CCH----HHHHHHHHHHHCCceeEecceee-
Q 020314 233 STFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-----PKG----ENLDFLVKLVKEGKLKTVIDSKH- 302 (327)
Q Consensus 233 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~~g~l~~~~~~~~- 302 (327)
...+++++++|+++.+|........+.......++..+.+.... .++ +.++.+++++..+.+.+.....+
T Consensus 235 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (341)
T cd08290 235 TELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVT 314 (341)
T ss_pred HHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccc
Confidence 78899999999999998432211122222233445555543321 112 35788899999999887666667
Q ss_pred --ccccHHHHHHHHhcCCCCccEEEeC
Q 020314 303 --SLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 303 --~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++++++++++.+.++...||+|+++
T Consensus 315 ~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 315 DDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred cCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 9999999999999999899999864
No 46
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.5e-40 Score=295.62 Aligned_cols=308 Identities=27% Similarity=0.370 Sum_probs=253.0
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||++++++++++ +++.+.+.|++.+++|+||+.++++|++|++...|.++...+..+|.++|+|++|+|+++|+++.
T Consensus 1 ~ka~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~ 77 (340)
T cd05284 1 MKAARLYEYGKP---LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD 77 (340)
T ss_pred CeeeEeccCCCC---ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence 699999987654 88888898899999999999999999999999888765323456789999999999999999999
Q ss_pred CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
++++||+|++.. .+|+|++|+.++.++++++|+++++++++.++..+.|||++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~ 157 (340)
T cd05284 78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA 157 (340)
T ss_pred cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 999999998753 25899999999999999999999999999999999999999
Q ss_pred HHHh-hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEec-CCcHHHHHhcCCCEEEeCCCCC-cccccCC
Q 020314 140 LTQS-LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN-THVTATCG-ARNIELVKSLGADEVLDYKTPD-GAALKSP 215 (327)
Q Consensus 140 l~~~-~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~ 215 (327)
+.+. ..+ .++++|||+| +|++|++++++|+..| ++|+++++ +++.+.++++|.+++++++... ..+.+..
T Consensus 158 l~~~~~~~-----~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~ 231 (340)
T cd05284 158 VKKALPYL-----DPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELT 231 (340)
T ss_pred HHHhcccC-----CCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHh
Confidence 9765 356 7899999999 6779999999999999 79998875 4677888899999988876542 1233345
Q ss_pred CCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314 216 SGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL 294 (327)
Q Consensus 216 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 294 (327)
.+.++|+++|++|+ ..+..++++++++|+++.+|.... ..+.......++..+.+. .......++.++++++++.+
T Consensus 232 ~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~l 308 (340)
T cd05284 232 GGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGS-LWGTRAELVEVVALAESGKV 308 (340)
T ss_pred CCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEE-ecccHHHHHHHHHHHHhCCC
Confidence 55689999999996 458889999999999999985542 111112223455555553 23356778899999999998
Q ss_pred eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 295 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++ ..+.|++++++++++.+.+++..||+++.|
T Consensus 309 ~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 309 KV-EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred Cc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 75 446799999999999999999999999875
No 47
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.7e-40 Score=296.37 Aligned_cols=307 Identities=21% Similarity=0.262 Sum_probs=249.0
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.++++ +++++.+.|.+.++||+||+.++++|++|++...+.++. ..+|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~~----~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~ 73 (351)
T cd08285 1 MKAFAMLGIGK----VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVK 73 (351)
T ss_pred CceEEEccCCc----cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcC
Confidence 79999988764 788888888899999999999999999999988876532 35688999999999999999999
Q ss_pred CCCCCCEEEEEc------------------------------cCcccceeEeecCC--ceeeCCCCCChhhhcccCchHH
Q 020314 87 NFKVGDKVVAVL------------------------------SGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCAGL 134 (327)
Q Consensus 87 ~~~~Gd~V~~~~------------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ 134 (327)
++++||+|++.. .+|+|++|+.++.+ .++++|+++++++++.++.++.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ 153 (351)
T cd08285 74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS 153 (351)
T ss_pred ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence 999999999742 26899999999974 8999999999999999999999
Q ss_pred HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cc
Q 020314 135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPD--GA 210 (327)
Q Consensus 135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~ 210 (327)
|+|+++ ...++ +++++|||+| +|++|++++|+|+++|+ .+++++++ ++.++++++|++.++++...+ ..
T Consensus 154 ta~~~~-~~~~~-----~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~ 226 (351)
T cd08285 154 TGFHGA-ELANI-----KLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQ 226 (351)
T ss_pred hHHHHH-HccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHH
Confidence 999997 66677 8999999997 79999999999999999 57777654 678888999999998876554 22
Q ss_pred cccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHHh--hhhccccceeeEEEEeCCCHHHHHHHH
Q 020314 211 ALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTFA--WKKLTFSKKQLVPFSVSPKGENLDFLV 286 (327)
Q Consensus 211 ~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
+.....++++|+++|++|++ .+..++++++++|+++.+|..... ...+. .....++..++.+......++++++++
T Consensus 227 i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 306 (351)
T cd08285 227 ILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLA 306 (351)
T ss_pred HHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHH
Confidence 33445567899999999975 588999999999999999865431 11111 111223344444433333567899999
Q ss_pred HHHHCCceeE---ecceeeccccHHHHHHHHhcCCC-CccEEEeC
Q 020314 287 KLVKEGKLKT---VIDSKHSLSKAEDAWAKSISGRA-TGKIIVEP 327 (327)
Q Consensus 287 ~~~~~g~l~~---~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~ 327 (327)
+++++|++++ .+.+.|+++++++|++.+++++. .+|+++.+
T Consensus 307 ~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 307 SLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred HHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 9999999886 44456999999999999999875 68999875
No 48
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=7.1e-40 Score=289.42 Aligned_cols=314 Identities=25% Similarity=0.351 Sum_probs=254.3
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++++++. ++.+++.+.+.|.+.+++|+||+.++++|+.|++...|..+.......|.++|||++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~ 79 (324)
T cd08244 1 MRAIRLHEFGP-PEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD 79 (324)
T ss_pred CeEEEEcCCCC-ccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence 68999987765 56678878777778999999999999999999999888653211235578899999999999999999
Q ss_pred CCCCCCEEEEEc--cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCC
Q 020314 87 NFKVGDKVVAVL--SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASG 164 (327)
Q Consensus 87 ~~~~Gd~V~~~~--~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g 164 (327)
++++||+|++.. ..|+|++|+.++...++++|+++++++++.+++.+.||| ++....++ +++++|+|+|++|
T Consensus 80 ~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~-----~~~~~vlI~g~~~ 153 (324)
T cd08244 80 PAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATL-----TPGDVVLVTAAAG 153 (324)
T ss_pred CCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCC-----CCCCEEEEEcCCc
Confidence 999999999853 279999999999999999999999999999999999995 55567777 8899999999999
Q ss_pred hHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314 165 AVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241 (327)
Q Consensus 165 ~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~ 241 (327)
++|++++++|+.+|++++++++. ++.+.++++|++.++++.+.+ ..+.+...++++|+++|++|+.....+++++++
T Consensus 154 ~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~ 233 (324)
T cd08244 154 GLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAP 233 (324)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhcc
Confidence 99999999999999999998854 677788899998888876554 234445566789999999998888889999999
Q ss_pred CcEEEeecCCchhHHHHhhhhccccceeeEEEEeCC-----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhc
Q 020314 242 TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP-----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSIS 316 (327)
Q Consensus 242 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~ 316 (327)
+|+++.+|........+.......++..+.+..... ..+.+++++++++++.+.+.+...|++++++++++.+.+
T Consensus 234 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~ 313 (324)
T cd08244 234 GGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEA 313 (324)
T ss_pred CcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHc
Confidence 999999986432211111112223344444322211 245678889999999998777789999999999999999
Q ss_pred CCCCccEEEeC
Q 020314 317 GRATGKIIVEP 327 (327)
Q Consensus 317 ~~~~gkvvv~~ 327 (327)
+...||+++.|
T Consensus 314 ~~~~~kvv~~~ 324 (324)
T cd08244 314 RSTVGKVLLLP 324 (324)
T ss_pred CCCCceEEEeC
Confidence 99999999875
No 49
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=4.2e-40 Score=292.34 Aligned_cols=316 Identities=28% Similarity=0.383 Sum_probs=246.2
Q ss_pred EEEEEeccC--CCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 8 HAVQYDSYG--GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 8 ~a~~~~~~g--~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
|||++.+++ ++++.++..+.+.|++.++||+||+.++++|+.|++...|..+. ..+|.++|+|++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v 77 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE---AGQPKILGWDAAGVVVAVGDEV 77 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC---CCCCcccceeeEEEEEEeCCCC
Confidence 588888872 33788999999999999999999999999999999988876431 2467899999999999999999
Q ss_pred CCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcC
Q 020314 86 KNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAA 162 (327)
Q Consensus 86 ~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~ 162 (327)
+.+++||+|+++. ..|+|++|++++++.++++|+++++++++.+++++.|||+++....+++....+++++|||+|+
T Consensus 78 ~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga 157 (336)
T TIGR02817 78 TLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGG 157 (336)
T ss_pred CCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcC
Confidence 9999999999853 2689999999999999999999999999999999999999998887772100112899999999
Q ss_pred CChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Cccccccccc
Q 020314 163 SGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IPWSTFEPNL 239 (327)
Q Consensus 163 ~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l 239 (327)
+|++|++++|+|+.+ |++|+++++ +++.+.++++|+++++++.......++...++++|+++|++++ .....+++++
T Consensus 158 ~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l 237 (336)
T TIGR02817 158 AGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELL 237 (336)
T ss_pred CcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHh
Confidence 999999999999998 999999985 4678888999999998865422222222455689999999864 5588999999
Q ss_pred CCCcEEEeecCCchhHH-HHhhhhccccceeeE-EEEe-CC----CHHHHHHHHHHHHCCceeEecceeec---cccHHH
Q 020314 240 GTTGKVIDFNPSPRVLL-TFAWKKLTFSKKQLV-PFSV-SP----KGENLDFLVKLVKEGKLKTVIDSKHS---LSKAED 309 (327)
Q Consensus 240 ~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~-~~~~-~~----~~~~~~~~~~~~~~g~l~~~~~~~~~---~~~~~~ 309 (327)
+++|+++.++....... .+....+.+....+. .... .. ....++++++++.++.+++.+.+.++ ++++++
T Consensus 238 ~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~ 317 (336)
T TIGR02817 238 APQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKR 317 (336)
T ss_pred ccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHH
Confidence 99999998864321111 111111222221111 0000 00 12567889999999999876665554 689999
Q ss_pred HHHHHhcCCCCccEEEe
Q 020314 310 AWAKSISGRATGKIIVE 326 (327)
Q Consensus 310 a~~~~~~~~~~gkvvv~ 326 (327)
|++.+.+++..||++++
T Consensus 318 a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 318 AHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHcCCccceEEEe
Confidence 99999999999999874
No 50
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=5.4e-40 Score=294.29 Aligned_cols=307 Identities=25% Similarity=0.282 Sum_probs=248.8
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
|+|||+++.+++++ +++++.+.|.+.++||+||+.++|+|++|++...|.++ ...|.++|||++|+|+++|++
T Consensus 1 ~~~~a~~~~~~~~~---~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~ 73 (365)
T cd08278 1 MKTTAAVVREPGGP---FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSA 73 (365)
T ss_pred CccEEeeeccCCCc---ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCC
Confidence 58999999987654 78899999999999999999999999999999988763 246789999999999999999
Q ss_pred CCCCCCCCEEEEE-------------------------------------------------ccCcccceeEeecCCcee
Q 020314 85 VKNFKVGDKVVAV-------------------------------------------------LSGGGLAEFAVAKESLTV 115 (327)
Q Consensus 85 ~~~~~~Gd~V~~~-------------------------------------------------~~~g~~a~~~~~~~~~~~ 115 (327)
+.++++||+|++. ...|+|++|+.+++++++
T Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~ 153 (365)
T cd08278 74 VTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVV 153 (365)
T ss_pred cccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEE
Confidence 9999999999852 124889999999999999
Q ss_pred eCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHH
Q 020314 116 ARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELV 193 (327)
Q Consensus 116 ~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~ 193 (327)
++|+++++++++.+++++.||++++....++ +++++|||+| +|++|++++++|++.|+ +++++++ +++.+.+
T Consensus 154 ~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~-----~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~ 227 (365)
T cd08278 154 KVDKDVPLELLAPLGCGIQTGAGAVLNVLKP-----RPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA 227 (365)
T ss_pred ECCCCCCHHHhhhhcchhhhhhHHHhhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 9999999999999999999999998777777 8899999997 69999999999999999 5777764 4678888
Q ss_pred HhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCc-hhHHHHhhhhcccccee
Q 020314 194 KSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLTFSKKQ 269 (327)
Q Consensus 194 ~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~ 269 (327)
+++|++.++++++.+ ..+.+.+ ++++|+++||+|+. .+..++++++++|+++.+|... .....+....+..++..
T Consensus 228 ~~~g~~~~i~~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 306 (365)
T cd08278 228 KELGATHVINPKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKT 306 (365)
T ss_pred HHcCCcEEecCCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCce
Confidence 999999998876654 2233344 67899999999864 4889999999999999998642 11122233333344555
Q ss_pred eEEEEeC--CCHHHHHHHHHHHHCCceeE-ecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 270 LVPFSVS--PKGENLDFLVKLVKEGKLKT-VIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~~~~~~g~l~~-~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
+.++... ...+.++++++++.+++++. .+...|++++++++++.+.+++.. |+++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 307 IRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred EEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 5543321 22567788999999999854 244579999999999999987765 77763
No 51
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=7.2e-40 Score=289.75 Aligned_cols=313 Identities=24% Similarity=0.329 Sum_probs=253.4
Q ss_pred ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
+||+|++.++|. ++.+++++.+.|.+.++||+||+.++|+|++|++...|.++. ...|.++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v 76 (327)
T PRK10754 1 MAKRIEFHKHGG-PEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGV 76 (327)
T ss_pred CceEEEEeccCC-hhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCC
Confidence 589999998885 688999999999999999999999999999999998887641 2457889999999999999999
Q ss_pred CCCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCC
Q 020314 86 KNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASG 164 (327)
Q Consensus 86 ~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g 164 (327)
+.+++||+|+... ..|+|++|+.++.+.++++|+++++++++.++..+.++|+++.+..++ .++++|+|+|++|
T Consensus 77 ~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~-----~~g~~vlI~g~~g 151 (327)
T PRK10754 77 KHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEI-----KPDEQFLFHAAAG 151 (327)
T ss_pred CCCCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-----CCCCEEEEEeCCc
Confidence 9999999998643 458999999999999999999999999999999999999998777777 8999999999999
Q ss_pred hHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314 165 AVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241 (327)
Q Consensus 165 ~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~ 241 (327)
.+|++++++|+.+|++++++++. ++.+.++++|.+.+++....+ ..+...+.++++|+++||+++.....+++++++
T Consensus 152 ~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~ 231 (327)
T PRK10754 152 GVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQR 231 (327)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhcc
Confidence 99999999999999999988854 677888899998888776544 234455667789999999998778889999999
Q ss_pred CcEEEeecCCchhHHHHhhhh------ccccceeeEEEEeCC--CHHHHHHHHHHHHCCceeEe--cceeeccccHHHHH
Q 020314 242 TGKVIDFNPSPRVLLTFAWKK------LTFSKKQLVPFSVSP--KGENLDFLVKLVKEGKLKTV--IDSKHSLSKAEDAW 311 (327)
Q Consensus 242 ~G~~v~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~a~ 311 (327)
+|+++.+|........+.... .......+.+..... ..+.++.+++++.+|.+++. ..+.|+++++++++
T Consensus 232 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~ 311 (327)
T PRK10754 232 RGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAH 311 (327)
T ss_pred CCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHH
Confidence 999999985432111111111 111111122211111 12345678899999999853 46889999999999
Q ss_pred HHHhcCCCCccEEEeC
Q 020314 312 AKSISGRATGKIIVEP 327 (327)
Q Consensus 312 ~~~~~~~~~gkvvv~~ 327 (327)
+.+.++...||+|+.+
T Consensus 312 ~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 312 EILESRATQGSSLLIP 327 (327)
T ss_pred HHHHcCCCcceEEEeC
Confidence 9999999999999864
No 52
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.1e-39 Score=288.40 Aligned_cols=309 Identities=27% Similarity=0.395 Sum_probs=255.6
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.+++ +..+++++.+.|.+.++||+||+.++++|+.|++...|.++. +...|..+|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~vG~~~~ 76 (341)
T cd08297 1 MKAAVVEEFG--EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV--KPKLPLIGGHEGAGVVVAVGPGVS 76 (341)
T ss_pred CceEEeeccC--CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCc--CCCCCccCCcccceEEEEeCCCCC
Confidence 7999998877 345999999999999999999999999999999998887642 124567899999999999999999
Q ss_pred CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314 87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138 (327)
Q Consensus 87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 138 (327)
.+++||+|+..+ ..|++++|+.++.+.++++|+++++.+++.++..+.|||+
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~ 156 (341)
T cd08297 77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK 156 (341)
T ss_pred CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence 999999998742 2689999999999999999999999999999999999999
Q ss_pred HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCC
Q 020314 139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSP 215 (327)
Q Consensus 139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~ 215 (327)
++.. .++ +++++|||+|+++.+|++++++|+++|++|++++++ ++.+.++++|.+.++++.+.+ ..+.+..
T Consensus 157 ~~~~-~~~-----~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 230 (341)
T cd08297 157 ALKK-AGL-----KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELT 230 (341)
T ss_pred HHHh-cCC-----CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHh
Confidence 9865 466 889999999988889999999999999999999854 677788889999988877654 2344455
Q ss_pred CCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314 216 SGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL 294 (327)
Q Consensus 216 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 294 (327)
.++++|+++|+.++ ..+..++++++++|+++.+|........+....+..++..+.+. .....+.++.++++++++.+
T Consensus 231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 309 (341)
T cd08297 231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGS-LVGTRQDLQEALEFAARGKV 309 (341)
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEe-ccCCHHHHHHHHHHHHcCCC
Confidence 66789999997764 55888999999999999998654322222233334556555552 22346889999999999998
Q ss_pred eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 295 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.+.+ ..|++++++++++.+.++...||+++++
T Consensus 310 ~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 310 KPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 7654 5799999999999999999999999875
No 53
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-39 Score=287.53 Aligned_cols=313 Identities=30% Similarity=0.413 Sum_probs=254.8
Q ss_pred ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
||||+++.+.+. .+.+++++.+.|++.++||+||+.++|+|+.|.....|.++. ...+|.++|+|++|+|+++|+++
T Consensus 1 ~m~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v 77 (334)
T PTZ00354 1 MMRAVTLKGFGG-VDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDV 77 (334)
T ss_pred CcEEEEEEecCC-CcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCC
Confidence 699999998876 456788888888899999999999999999999998876532 12456789999999999999999
Q ss_pred CCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314 86 KNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA 165 (327)
Q Consensus 86 ~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~ 165 (327)
+++++||+|+++..+|++++|++++.+.++++|+++++.+++.++.++.+||+++.+..++ +++++|+|+|++|+
T Consensus 78 ~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~-----~~~~~vlI~ga~g~ 152 (334)
T PTZ00354 78 KRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDV-----KKGQSVLIHAGASG 152 (334)
T ss_pred CCCCCCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEEcCCch
Confidence 9999999999976679999999999999999999999999999999999999999777777 88999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC---cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314 166 VGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD---GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241 (327)
Q Consensus 166 ~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~ 241 (327)
+|++++++|+++|++++.+++ +++.+.+.++|.+.++++...+ ..+.+.+.++++|++||+++++.+..+++++++
T Consensus 153 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~ 232 (334)
T PTZ00354 153 VGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAV 232 (334)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcc
Confidence 999999999999998777664 4677888889998888775533 233444556789999999998888899999999
Q ss_pred CcEEEeecCCchhHHH-HhhhhccccceeeEEEEeCC-----C----HHHHHHHHHHHHCCceeEecceeeccccHHHHH
Q 020314 242 TGKVIDFNPSPRVLLT-FAWKKLTFSKKQLVPFSVSP-----K----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAW 311 (327)
Q Consensus 242 ~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~ 311 (327)
+|+++.++........ +....+..+...+.+..... . .+.++.+++++.++.+.+.+.+.++++++++++
T Consensus 233 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 312 (334)
T PTZ00354 233 DGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAH 312 (334)
T ss_pred CCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHH
Confidence 9999998754322211 22222233333444422211 1 134577889999999987777889999999999
Q ss_pred HHHhcCCCCccEEEe
Q 020314 312 AKSISGRATGKIIVE 326 (327)
Q Consensus 312 ~~~~~~~~~gkvvv~ 326 (327)
+.+.+++..||++++
T Consensus 313 ~~~~~~~~~~kvvv~ 327 (334)
T PTZ00354 313 TFLEQNKNIGKVVLT 327 (334)
T ss_pred HHHHhCCCCceEEEe
Confidence 999988888999985
No 54
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.7e-39 Score=282.46 Aligned_cols=299 Identities=30% Similarity=0.366 Sum_probs=246.1
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||+|++.+.+ |..+++++.+.|.+.++||+||+.++++|+.|++...+. ..|.++|+|++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-------~~~~~~g~e~~G~v~~~G~~v~ 71 (305)
T cd08270 1 MRALVVDPDA--PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-------PDGAVPGWDAAGVVERAAADGS 71 (305)
T ss_pred CeEEEEccCC--CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-------CCCCcccceeEEEEEEeCCCCC
Confidence 6899998754 567888899999999999999999999999999876522 2356899999999999999999
Q ss_pred CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314 87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV 166 (327)
Q Consensus 87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~ 166 (327)
.+++||+|+++...|+|++|+.++.+.++++|+++++++++.+++.+.|||+++.+.... ++++++|+|++|++
T Consensus 72 ~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~------~~~~vli~g~~~~~ 145 (305)
T cd08270 72 GPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL------LGRRVLVTGASGGV 145 (305)
T ss_pred CCCCCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC------CCCEEEEECCCcHH
Confidence 999999999976689999999999999999999999999999999999999999665433 59999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEE
Q 020314 167 GLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKV 245 (327)
Q Consensus 167 G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~ 245 (327)
|++++++|+..|++++.+++ +++.+.++++|++.+++.... .. ++++|+++|++|+..+..++++++++|++
T Consensus 146 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~-~~~~d~vl~~~g~~~~~~~~~~l~~~G~~ 218 (305)
T cd08270 146 GRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSE------LS-GAPVDLVVDSVGGPQLARALELLAPGGTV 218 (305)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecccc------cc-CCCceEEEECCCcHHHHHHHHHhcCCCEE
Confidence 99999999999999999885 467888888998766543221 11 24699999999988888999999999999
Q ss_pred EeecCCchhHHHHhhhhccc--cceeeEEEEeC---CCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCC
Q 020314 246 IDFNPSPRVLLTFAWKKLTF--SKKQLVPFSVS---PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRAT 320 (327)
Q Consensus 246 v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~ 320 (327)
+.+|........+....+.. ++..+.++... ...+.++.+++++.++++++.+.+.+++++++++++.+.+++..
T Consensus 219 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~ 298 (305)
T cd08270 219 VSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFR 298 (305)
T ss_pred EEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCC
Confidence 99985432212222222222 35555553322 12467888999999999987777899999999999999999999
Q ss_pred ccEEEeC
Q 020314 321 GKIIVEP 327 (327)
Q Consensus 321 gkvvv~~ 327 (327)
||+|+++
T Consensus 299 gkvvi~~ 305 (305)
T cd08270 299 GKAVLDV 305 (305)
T ss_pred ceEEEeC
Confidence 9999875
No 55
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=2.1e-39 Score=286.54 Aligned_cols=312 Identities=23% Similarity=0.279 Sum_probs=246.5
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||++++++++ ++.+++++.+.|.+.++||+||+.++|+|++|++...|.++. ...+|.++|||++|+|+++ +++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~--~~~ 75 (325)
T cd05280 1 FKALVVEEQDG-GVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV--TRNYPHTPGIDAAGTVVSS--DDP 75 (325)
T ss_pred CceEEEcccCC-CCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC--CCCCCCccCcccEEEEEEe--CCC
Confidence 79999998875 456999999999999999999999999999999999887531 1245789999999999998 456
Q ss_pred CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCC-CCCeEEE
Q 020314 87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSG-QQKNILI 159 (327)
Q Consensus 87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~-~~~~vlV 159 (327)
.+++||+|++.. .+|+|++|++++.+.++++|+++++++++.+++.+.++|+++....+.. .. ++++|+|
T Consensus 76 ~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~---~~~~~~~vlI 152 (325)
T cd05280 76 RFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNG---QTPEDGPVLV 152 (325)
T ss_pred CCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhcc---CCCCCCEEEE
Confidence 899999999853 3689999999999999999999999999999999999999986554321 13 4579999
Q ss_pred EcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccc
Q 020314 160 TAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPN 238 (327)
Q Consensus 160 ~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 238 (327)
+|++|++|++++++|+.+|++|+++++ +++++.++++|++.+++..+......+...++++|+++|++|++.+..++++
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 232 (325)
T cd05280 153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQ 232 (325)
T ss_pred ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHh
Confidence 999999999999999999999888885 4678888999999888765432222333444579999999999889999999
Q ss_pred cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-C----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHH
Q 020314 239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-P----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAK 313 (327)
Q Consensus 239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~ 313 (327)
++++|+++.+|........+....+..++..+.+.... . ..+.++.+.+++..+ +...+...|++++++++++.
T Consensus 233 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~ 311 (325)
T cd05280 233 TKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPD-LLEIVVREISLEELPEAIDR 311 (325)
T ss_pred hcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcC-CccceeeEecHHHHHHHHHH
Confidence 99999999998643221122223333455555553221 1 123455666666666 33456779999999999999
Q ss_pred HhcCCCCccEEEeC
Q 020314 314 SISGRATGKIIVEP 327 (327)
Q Consensus 314 ~~~~~~~gkvvv~~ 327 (327)
+.+++..||+|+++
T Consensus 312 ~~~~~~~gk~vv~~ 325 (325)
T cd05280 312 LLAGKHRGRTVVKI 325 (325)
T ss_pred HhcCCcceEEEEeC
Confidence 99999999999874
No 56
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.3e-39 Score=266.66 Aligned_cols=307 Identities=24% Similarity=0.267 Sum_probs=247.7
Q ss_pred eEEEEEeccCC---CccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccc----eEEEE
Q 020314 7 MHAVQYDSYGG---GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDV----AGEVI 79 (327)
Q Consensus 7 ~~a~~~~~~g~---~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~----~G~V~ 79 (327)
.|.|++..... .++.+++++.++|+|.++|||+|+.|.|++|..+-.++... ++ -.|+.+|... +|+|+
T Consensus 9 ~~~~~la~rP~g~p~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~-SY---~~P~~lG~~~~gg~V~~Vv 84 (340)
T COG2130 9 NRRIVLASRPEGAPVPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAP-SY---APPVELGEVMVGGTVAKVV 84 (340)
T ss_pred hheeeeccCCCCCCCCCCceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCc-cc---CCCcCCCceeECCeeEEEE
Confidence 36677755321 14669999999999999999999999999996554444332 22 2345555444 45555
Q ss_pred ecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCC--hhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeE
Q 020314 80 GLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVS--AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNI 157 (327)
Q Consensus 80 ~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~--~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~v 157 (327)
+ |+..+|++||.|.+. .+|++|..++...+.++++..- ......+.++..|||.+|.+.++. |+|++|
T Consensus 85 ~--S~~~~f~~GD~V~~~---~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqp-----k~Getv 154 (340)
T COG2130 85 A--SNHPGFQPGDIVVGV---SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQP-----KAGETV 154 (340)
T ss_pred e--cCCCCCCCCCEEEec---ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCC-----CCCCEE
Confidence 5 678899999999986 4999999999999999986533 233456788899999999999988 999999
Q ss_pred EEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHh-cCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCCCcccc
Q 020314 158 LITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKS-LGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWST 234 (327)
Q Consensus 158 lV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~-lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~ 234 (327)
+|.+|+|++|..+.|+||..|++|++++ +++|.+++++ +|.|.++|++..+ .+.++..+..|+|++||++|++.++.
T Consensus 155 vVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DA 234 (340)
T COG2130 155 VVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDA 234 (340)
T ss_pred EEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHH
Confidence 9999999999999999999999999999 4589998876 9999999999888 45666778899999999999999999
Q ss_pred cccccCCCcEEEeecCCch------hHHHHhhhhccccceeeEEEEeCC-----CHHHHHHHHHHHHCCceeEecceeec
Q 020314 235 FEPNLGTTGKVIDFNPSPR------VLLTFAWKKLTFSKKQLVPFSVSP-----KGENLDFLVKLVKEGKLKTVIDSKHS 303 (327)
Q Consensus 235 ~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~~~~~~~~~ 303 (327)
.+..|+.++|++.+|.-+. ...+-.+..+..++.++.|+.... .++.++++..++++|+|+...+.+-.
T Consensus 235 v~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dG 314 (340)
T COG2130 235 VLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDG 314 (340)
T ss_pred HHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhh
Confidence 9999999999999984321 111223334455677888875521 24778999999999999988777778
Q ss_pred cccHHHHHHHHhcCCCCccEEEeC
Q 020314 304 LSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 304 ~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++++|+||..|.+|++.||+|+++
T Consensus 315 lEnaP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 315 LENAPEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred hhccHHHHHHHhcCCccceEEEEe
Confidence 999999999999999999999874
No 57
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.7e-39 Score=291.65 Aligned_cols=307 Identities=28% Similarity=0.388 Sum_probs=252.7
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||||++.+++.+ +++++.+.|.+.++||+||+.++++|+.|++...+.++ ..+|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~ 73 (367)
T cd08263 1 MKAAVLKGPNPP---LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVE 73 (367)
T ss_pred CeeEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCC
Confidence 789999888654 88889999999999999999999999999999888764 35678999999999999999998
Q ss_pred C---CCCCCEEEEE-------------------------------------------------ccCcccceeEeecCCce
Q 020314 87 N---FKVGDKVVAV-------------------------------------------------LSGGGLAEFAVAKESLT 114 (327)
Q Consensus 87 ~---~~~Gd~V~~~-------------------------------------------------~~~g~~a~~~~~~~~~~ 114 (327)
+ +++||+|++. ...|+|++|+.++.+.+
T Consensus 74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (367)
T cd08263 74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL 153 (367)
T ss_pred CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence 8 9999999872 13589999999999999
Q ss_pred eeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHH
Q 020314 115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIEL 192 (327)
Q Consensus 115 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~ 192 (327)
+++|+++++.+++.++.+++|||+++.....+ .++++|||+| +|++|++++++|+.+|++ ++++++ +++.+.
T Consensus 154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~-----~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~ 227 (367)
T cd08263 154 APLPESLDYTESAVLGCAGFTAYGALKHAADV-----RPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAK 227 (367)
T ss_pred EECCCCCCHHHHhHhcchHHHHHHHHHhcccC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence 99999999999999999999999999777777 7899999996 799999999999999997 877764 467778
Q ss_pred HHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHHhhhhccccce
Q 020314 193 VKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTFAWKKLTFSKK 268 (327)
Q Consensus 193 ~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~ 268 (327)
++++|++.+++++..+ .++.+...++++|++||++++. .+..++++++++|+++.++..... ...+....+..++.
T Consensus 228 ~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 307 (367)
T cd08263 228 AKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGI 307 (367)
T ss_pred HHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCe
Confidence 8889999998876554 2344445567899999999987 688899999999999999854321 11122222223444
Q ss_pred eeEEEEeCCCHHHHHHHHHHHHCCceeEe--cceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 269 QLVPFSVSPKGENLDFLVKLVKEGKLKTV--IDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
.+.+.+.....+.++.+++++.++.+.+. +.+.+++++++++++.+.+++..||+|++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 308 KIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred EEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 44442222235788999999999998763 56789999999999999999989999985
No 58
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=5.3e-39 Score=285.57 Aligned_cols=302 Identities=20% Similarity=0.238 Sum_probs=239.7
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.+++. +++++.+.|++.++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~ 73 (339)
T PRK10083 1 MKSIVIEKPNS----LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVD 73 (339)
T ss_pred CeEEEEecCCe----eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCc
Confidence 68999987553 899999999999999999999999999999998887542 25689999999999999999999
Q ss_pred CCCCCCEEEE---------------------------EccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVA---------------------------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~---------------------------~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
++++||+|+. +..+|+|++|+.++...++++|+++++++++ +..++.++|++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~ 152 (339)
T PRK10083 74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV 152 (339)
T ss_pred cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence 9999999983 2236899999999999999999999998876 55677888865
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh-CCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCc-ccccCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL-GNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDG-AALKSP 215 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~-~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~ 215 (327)
. +..++ +++++|+|+| +|++|++++|+|+. +|++ ++++.+ +++.++++++|++.++++.+.+. +.+..
T Consensus 153 ~-~~~~~-----~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~- 224 (339)
T PRK10083 153 T-GRTGP-----TEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEE- 224 (339)
T ss_pred H-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhc-
Confidence 4 66777 8999999999 79999999999996 6995 555554 46888899999999998765432 22211
Q ss_pred CCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314 216 SGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL 294 (327)
Q Consensus 216 ~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 294 (327)
.+.++|++||++|+. .+..++++++++|+++.+|..... ..+....+..+.+.+.+. ....+.++.+++++.++++
T Consensus 225 ~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l 301 (339)
T PRK10083 225 KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEP-SEIVQQGITGKELSIFSS--RLNANKFPVVIDWLSKGLI 301 (339)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-ceecHHHHhhcceEEEEE--ecChhhHHHHHHHHHcCCC
Confidence 233467999999964 588999999999999999865321 112222223344444432 2345778999999999998
Q ss_pred eE--ecceeeccccHHHHHHHHhcCC-CCccEEEeC
Q 020314 295 KT--VIDSKHSLSKAEDAWAKSISGR-ATGKIIVEP 327 (327)
Q Consensus 295 ~~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~ 327 (327)
++ ++.+.|+++++++|++.+.+++ ..+|+++++
T Consensus 302 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 302 DPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred ChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence 86 4678999999999999998654 468999864
No 59
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=7.1e-39 Score=285.41 Aligned_cols=306 Identities=24% Similarity=0.360 Sum_probs=253.3
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||||++.+++.+ +++++.+.|.+.+++|+||+.++++|+.|+....|..+. ..+|.++|+|++|+|+.+|++++
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~ 74 (345)
T cd08260 1 MRAAVYEEFGEP---LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVS 74 (345)
T ss_pred CeeEEEecCCCC---cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCc
Confidence 799999887764 888999999999999999999999999999998887642 35688999999999999999999
Q ss_pred CCCCCCEEEE---------------------------EccCcccceeEeecCC--ceeeCCCCCChhhhcccCchHHHHH
Q 020314 87 NFKVGDKVVA---------------------------VLSGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCAGLTAH 137 (327)
Q Consensus 87 ~~~~Gd~V~~---------------------------~~~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ta~ 137 (327)
++++||+|++ +...|+|++|+.+++. .++++|+++++++++.++.++.+||
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~ 154 (345)
T cd08260 75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF 154 (345)
T ss_pred cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence 9999999986 2236899999999985 8999999999999999999999999
Q ss_pred HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCC-CC--ccccc
Q 020314 138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKT-PD--GAALK 213 (327)
Q Consensus 138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~-~~--~~~~~ 213 (327)
+++....++ .++++|+|+| +|++|++++++|+..|++++++++ .++.+.++++|++.++++++ .+ ..+..
T Consensus 155 ~~l~~~~~~-----~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~ 228 (345)
T cd08260 155 RALVHQARV-----KPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRD 228 (345)
T ss_pred HHHHHccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHH
Confidence 999777777 7899999999 799999999999999999998874 46788888899999998876 33 22333
Q ss_pred CCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhH--HHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHH
Q 020314 214 SPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVL--LTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK 290 (327)
Q Consensus 214 ~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
...+ ++|++|||+|+ ..+..++++++++|+++.+|...... ..+....+..++..+.+.. ....+.++.++++++
T Consensus 229 ~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 306 (345)
T cd08260 229 LTGG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSH-GMPAHRYDAMLALIA 306 (345)
T ss_pred HhCC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCC-cCCHHHHHHHHHHHH
Confidence 3444 79999999985 45788999999999999998643221 1222333334555555532 245678899999999
Q ss_pred CCceeEe--cceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 291 EGKLKTV--IDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 291 ~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
++.+.+. +.+.+++++++++++.+.++...||+|++
T Consensus 307 ~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 307 SGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred cCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 9998753 56789999999999999999999999875
No 60
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=5.6e-39 Score=289.60 Aligned_cols=306 Identities=23% Similarity=0.265 Sum_probs=246.5
Q ss_pred eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
|||++++++ +.+++++.+.|.+ .+++|+||+.++++|++|++...|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~----~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v 73 (386)
T cd08283 1 MKALVWHGK----GDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEV 73 (386)
T ss_pred CeeEEEecC----CCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCC
Confidence 789999754 3489999999888 4999999999999999999999998653 2568899999999999999999
Q ss_pred CCCCCCCEEEEEc-----------------------------------------------cCcccceeEeecCC--ceee
Q 020314 86 KNFKVGDKVVAVL-----------------------------------------------SGGGLAEFAVAKES--LTVA 116 (327)
Q Consensus 86 ~~~~~Gd~V~~~~-----------------------------------------------~~g~~a~~~~~~~~--~~~~ 116 (327)
+++++||+|++.+ ..|+|++|++++.+ .+++
T Consensus 74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence 9999999998743 15899999999988 8999
Q ss_pred CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHH
Q 020314 117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVK 194 (327)
Q Consensus 117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~ 194 (327)
+|+++++++++.++..+.+||+++ +..++ .++++|||+| +|.+|++++++|++.|+ +++++++ +++.+.++
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~-----~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~ 226 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAA-ELAEV-----KPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMAR 226 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHH-hhccC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 999999999999999999999999 77777 8899999997 79999999999999998 5888874 57888888
Q ss_pred hcCCCEEEeCCCCC---cccccCCCCCcccEEEeCCCCC----------------------cccccccccCCCcEEEeec
Q 020314 195 SLGADEVLDYKTPD---GAALKSPSGRKYDAVINCVTGI----------------------PWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 195 ~lg~~~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~----------------------~~~~~~~~l~~~G~~v~~g 249 (327)
+++...++++...+ ..+...+.++++|++||++|++ .+..++++++++|+++.+|
T Consensus 227 ~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g 306 (386)
T cd08283 227 SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIG 306 (386)
T ss_pred HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEc
Confidence 88444677765542 2233445566899999999854 3667889999999999998
Q ss_pred CCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCC-CCccEEEe
Q 020314 250 PSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGR-ATGKIIVE 326 (327)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~ 326 (327)
........+.......+...+.+. .....+.++.++++++++++.+ .+.+.|+++++++|++.+.++. ..+|++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 307 VYGGTVNKFPIGAAMNKGLTLRMG-QTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred CCCCCcCccCHHHHHhCCcEEEec-cCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 653321122222233445555542 2334677899999999999876 3567899999999999998877 45899987
Q ss_pred C
Q 020314 327 P 327 (327)
Q Consensus 327 ~ 327 (327)
+
T Consensus 386 ~ 386 (386)
T cd08283 386 P 386 (386)
T ss_pred C
Confidence 4
No 61
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=7.8e-39 Score=285.66 Aligned_cols=309 Identities=28% Similarity=0.380 Sum_probs=252.2
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCC---------CCCCCCeeecccceEE
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF---------LPRKFPFIPASDVAGE 77 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~---------~~~~~p~~~G~e~~G~ 77 (327)
|||+++...+++ +++++.+.|++.++||+||+.++++|++|++...|.++.. ....+|.++|+|++|+
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~ 77 (350)
T cd08240 1 MKAAAVVEPGKP---LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE 77 (350)
T ss_pred CeeEEeccCCCC---ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence 799999887764 8889999999999999999999999999999988865310 0124568899999999
Q ss_pred EEecCCCCCCCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314 78 VIGLGSEVKNFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP 130 (327)
Q Consensus 78 V~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~ 130 (327)
|+++|++++++++||+|++++ ..|++++|+.++.+.++++|+++++.+++.+.
T Consensus 78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~ 157 (350)
T cd08240 78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA 157 (350)
T ss_pred EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence 999999999999999998752 46899999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCCC
Q 020314 131 CAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTPD 208 (327)
Q Consensus 131 ~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~ 208 (327)
+.+.|||+++.....+ +++++|+|+| +|++|++++|+|+..|+ +|+++++ +++.+.++++|.+.+++..+..
T Consensus 158 ~~~~tA~~~~~~~~~~-----~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 231 (350)
T cd08240 158 CSGLTAYSAVKKLMPL-----VADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPD 231 (350)
T ss_pred chhhhHHHHHHhcccC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCcc
Confidence 9999999999766555 6889999996 79999999999999999 6777774 4678888999998888766544
Q ss_pred c--ccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHH
Q 020314 209 G--AALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL 285 (327)
Q Consensus 209 ~--~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
. .+.+...+ ++|++||++|. ..+..++++|+++|+++.+|..... .........+++..+.+.. ....+++..+
T Consensus 232 ~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~ 308 (350)
T cd08240 232 AAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSY-VGSLEELREL 308 (350)
T ss_pred HHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcc-cCCHHHHHHH
Confidence 2 23333344 79999999985 4588999999999999998854332 1112222345666666532 3345788999
Q ss_pred HHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 286 VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 286 ~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++++++.+++.....+++++++++++.+.+++..||+++.+
T Consensus 309 ~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 309 VALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred HHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 999999998876667899999999999999999899999864
No 62
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=7.6e-39 Score=284.05 Aligned_cols=304 Identities=30% Similarity=0.402 Sum_probs=249.6
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.+++++ +++++.+.|.+.++||+||+.++++|+.|++...|..+. ..+|..+|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~g~~~~ 74 (334)
T PRK13771 1 MKAVILPGFKQG---YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTVEEVGENVK 74 (334)
T ss_pred CeeEEEcCCCCC---cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEEEEeCCCCc
Confidence 789999888764 899999999999999999999999999999988886531 25678999999999999999998
Q ss_pred CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
.+++||+|++.. .+|+|++|+.++.+.++++|+++++.+++.+++++.++|++
T Consensus 75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~ 154 (334)
T PRK13771 75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG 154 (334)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence 899999999863 16899999999999999999999999999999999999999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGR 218 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~ 218 (327)
+... ++ .++++|+|+|++|.+|++++++|+..|++++++++ +++.+.++++ ++.+++.......+.+ . .
T Consensus 155 ~~~~-~~-----~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~-~--~ 224 (334)
T PRK13771 155 LRRA-GV-----KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKK-I--G 224 (334)
T ss_pred HHhc-CC-----CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHh-c--C
Confidence 8655 77 78999999999999999999999999999988875 4677777777 6666655411122222 2 2
Q ss_pred cccEEEeCCCCCcccccccccCCCcEEEeecCCchhHH-HHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEe
Q 020314 219 KYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLL-TFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297 (327)
Q Consensus 219 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 297 (327)
++|+++||+|+..+..++++++++|+++.+|....... .........++..+.+. ....++.++.++++++++.+++.
T Consensus 225 ~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 303 (334)
T PRK13771 225 GADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGH-ISATKRDVEEALKLVAEGKIKPV 303 (334)
T ss_pred CCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEe-cCCCHHHHHHHHHHHHcCCCcce
Confidence 69999999998778899999999999999986432211 11111223455555553 23457889999999999999877
Q ss_pred cceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 298 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+.+.|++++++++++.+.++...||+++.+
T Consensus 304 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 304 IGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred EeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 778999999999999999988889999864
No 63
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.1e-38 Score=281.30 Aligned_cols=300 Identities=23% Similarity=0.348 Sum_probs=249.9
Q ss_pred EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314 8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87 (327)
Q Consensus 8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 87 (327)
|+|+++..+. .+++++.+.|++.++||+||+.++++|+.|++...|... ...+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~ 74 (337)
T cd05283 1 KGYAARDASG---KLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTK 74 (337)
T ss_pred CceEEecCCC---CceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcc
Confidence 5788887664 599999999999999999999999999999999988763 2356889999999999999999999
Q ss_pred CCCCCEEEEE-----------------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCch
Q 020314 88 FKVGDKVVAV-----------------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCA 132 (327)
Q Consensus 88 ~~~Gd~V~~~-----------------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 132 (327)
+++||+|+.. ...|+|++|+.++.+.++++|+++++++++.+.+.
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~ 154 (337)
T cd05283 75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA 154 (337)
T ss_pred cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence 9999999731 23689999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCccc
Q 020314 133 GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAA 211 (327)
Q Consensus 133 ~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~ 211 (327)
+.+||+++.+ .++ +++++++|.| .|++|++++++|+..|+++++++++ ++.+.++++|++.+++....+..
T Consensus 155 ~~ta~~~~~~-~~~-----~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~- 226 (337)
T cd05283 155 GITVYSPLKR-NGV-----GPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAM- 226 (337)
T ss_pred HHHHHHHHHh-cCC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhh-
Confidence 9999999854 456 7899999977 7999999999999999999888854 67788889999988876553321
Q ss_pred ccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHH
Q 020314 212 LKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK 290 (327)
Q Consensus 212 ~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
+ ..++++|++|||+|... +..++++++++|+++.+|...... .+....+..++..+.+.. ....+.++.+++++.
T Consensus 227 -~-~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~ 302 (337)
T cd05283 227 -K-KAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL-PVPPFPLIFGRKSVAGSL-IGGRKETQEMLDFAA 302 (337)
T ss_pred -h-hccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC-ccCHHHHhcCceEEEEec-ccCHHHHHHHHHHHH
Confidence 1 12467999999999875 889999999999999998653321 223333445677777643 346678999999999
Q ss_pred CCceeEecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 291 EGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 291 ~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus 303 ~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 303 EHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred hCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 99988754 689999999999999999999999874
No 64
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=9e-39 Score=282.62 Aligned_cols=314 Identities=22% Similarity=0.281 Sum_probs=239.5
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||||++.++|+ ++.+++++.+.|.+.++||+||+.++++|+.|.....+... ....+|.++|||++|+|++.| ++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~V~~~~--~~ 75 (326)
T cd08289 1 FQALVVEKDED-DVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK--IVKRYPFIPGIDLAGTVVESN--DP 75 (326)
T ss_pred CeeEEEeccCC-cceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc--ccCCCCcCcccceeEEEEEcC--CC
Confidence 79999998875 56788999999999999999999999999999876643211 012457899999999999954 57
Q ss_pred CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314 87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT 160 (327)
Q Consensus 87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~ 160 (327)
.+++||+|++.. ..|+|++|..++++.++++|+++++++++.+++++.|||+++....+... ..++++|||+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~--~~~~~~vlI~ 153 (326)
T cd08289 76 RFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGL--TPEQGPVLVT 153 (326)
T ss_pred CCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCC--CCCCCEEEEE
Confidence 799999999864 37999999999999999999999999999999999999998865433110 0457899999
Q ss_pred cCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccccccccc
Q 020314 161 AASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL 239 (327)
Q Consensus 161 g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l 239 (327)
|++|++|++++++|+++|++|+++++ +++.+.++++|++.+++.++.....+....++++|++||++|+..+..+++++
T Consensus 154 g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l 233 (326)
T cd08289 154 GATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTL 233 (326)
T ss_pred cCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHHh
Confidence 99999999999999999999998885 47888889999988887654322222222356799999999987788999999
Q ss_pred CCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-C----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314 240 GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-P----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS 314 (327)
Q Consensus 240 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~ 314 (327)
+++|+++.+|.......+.....+..++..+.+.... . ..+.++.+...+....+...+.+.+++++++++|+.+
T Consensus 234 ~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~ 313 (326)
T cd08289 234 QYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQI 313 (326)
T ss_pred hcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHH
Confidence 9999999998643221121122333455555553211 1 1223333333333233333567899999999999999
Q ss_pred hcCCCCccEEEeC
Q 020314 315 ISGRATGKIIVEP 327 (327)
Q Consensus 315 ~~~~~~gkvvv~~ 327 (327)
.+++..||+++++
T Consensus 314 ~~~~~~gkvvv~~ 326 (326)
T cd08289 314 LQGRVTGRTVVKL 326 (326)
T ss_pred hcCcccceEEEeC
Confidence 9999999999874
No 65
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=2.2e-38 Score=280.78 Aligned_cols=304 Identities=31% Similarity=0.413 Sum_probs=249.1
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++..++ +.+.+++.+.|.+.+++|+|+++++++|+.|++...|.++. ...|.++|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~---~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~ 74 (332)
T cd08259 1 MKAAILHKPN---KPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVE 74 (332)
T ss_pred CeEEEEecCC---CceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCc
Confidence 6899998633 34889999999999999999999999999999998887542 25678999999999999999999
Q ss_pred CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
.+++||+|+++. ..|+|++|++++...++++|+++++++++.++.++.+||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~ 154 (332)
T cd08259 75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA 154 (332)
T ss_pred cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence 999999999864 16899999999999999999999999999999999999999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGR 218 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~ 218 (327)
+.. .++ .++++++|+|++|++|++++++++..|+++++++++ ++.+.+++++.+.+++..+ ..+.+... .
T Consensus 155 l~~-~~~-----~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~ 225 (332)
T cd08259 155 LKR-AGV-----KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK-FSEDVKKL--G 225 (332)
T ss_pred HHH-hCC-----CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH-HHHHHHhc--c
Confidence 966 777 789999999999999999999999999999988854 6677778888887776544 21222222 2
Q ss_pred cccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEec
Q 020314 219 KYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVI 298 (327)
Q Consensus 219 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 298 (327)
++|+++|++|......++++++++|+++.++........+......+++..+.+. .......++.+++++.++.+++.+
T Consensus 226 ~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 304 (332)
T cd08259 226 GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGS-ISATKADVEEALKLVKEGKIKPVI 304 (332)
T ss_pred CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEe-cCCCHHHHHHHHHHHHcCCCccce
Confidence 6999999999888888999999999999988543221111111122344444442 234577889999999999998877
Q ss_pred ceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 299 DSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 299 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
.+.|++++++++++.+.+++..||++++
T Consensus 305 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 305 DRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred eEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 7899999999999999999888999874
No 66
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.3e-38 Score=284.02 Aligned_cols=306 Identities=23% Similarity=0.283 Sum_probs=246.9
Q ss_pred eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
||++++.+++. +++.+.+.|.+ .++||+||+.++++|+.|++...|.++. ..+|.++|+|++|+|+++|+++
T Consensus 1 ~ka~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v 73 (347)
T cd05278 1 MKALVYLGPGK----IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDV 73 (347)
T ss_pred CceEEEecCCc----eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCc
Confidence 68999987654 88899999888 8999999999999999999999887642 3568899999999999999999
Q ss_pred CCCCCCCEEEEE------------------------------ccCcccceeEeecCC--ceeeCCCCCChhhhcccCchH
Q 020314 86 KNFKVGDKVVAV------------------------------LSGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCAG 133 (327)
Q Consensus 86 ~~~~~Gd~V~~~------------------------------~~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~ 133 (327)
+++++||+|++. ..+|+|++|++++++ .++++|+++++++++.++.++
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~ 153 (347)
T cd05278 74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL 153 (347)
T ss_pred cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence 999999999872 135899999999987 899999999999999999999
Q ss_pred HHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--
Q 020314 134 LTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPDG-- 209 (327)
Q Consensus 134 ~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-- 209 (327)
.|||+++ ...++ +++++|||.| +|++|++++|+|+.+|. +++++.++ ++.+.++++|++.++++++.+.
T Consensus 154 ~ta~~~~-~~~~~-----~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 226 (347)
T cd05278 154 PTGFHGA-ELAGI-----KPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVE 226 (347)
T ss_pred hheeehh-hhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHH
Confidence 9999998 66777 8899999976 69999999999999997 78877644 5777888999999988776542
Q ss_pred ccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314 210 AALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL 288 (327)
Q Consensus 210 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
.+...+.++++|++||++++ ..+..++++++++|+++.+|................++..+.+. .....+.++.++++
T Consensus 227 ~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 305 (347)
T cd05278 227 QILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTG-LVPVRARMPELLDL 305 (347)
T ss_pred HHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEee-ccCchhHHHHHHHH
Confidence 23334555789999999987 46888999999999999988543321100111111234444332 22336788999999
Q ss_pred HHCCceeEe--cceeeccccHHHHHHHHhcCCC-CccEEEeC
Q 020314 289 VKEGKLKTV--IDSKHSLSKAEDAWAKSISGRA-TGKIIVEP 327 (327)
Q Consensus 289 ~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~ 327 (327)
++++.+++. +...|++++++++++.+..++. .+|+++++
T Consensus 306 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 306 IEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred HHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 999998763 4578999999999999988877 68999865
No 67
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.3e-38 Score=282.89 Aligned_cols=313 Identities=33% Similarity=0.478 Sum_probs=250.6
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++..+| +..+++++.+.|.+.++||+||+.++++|+.|++...+... ...|.++|+|++|+|+.+|++++
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~vG~~v~ 74 (339)
T cd08249 1 QKAAVLTGPG--GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI----PSYPAILGCDFAGTVVEVGSGVT 74 (339)
T ss_pred CceEEeccCC--CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccc----cCCCceeeeeeeEEEEEeCCCcC
Confidence 7899998875 45689999999999999999999999999999987755531 13567999999999999999999
Q ss_pred CCCCCCEEEEEcc--------CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCcc-----CCCCC
Q 020314 87 NFKVGDKVVAVLS--------GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKL-----DGSGQ 153 (327)
Q Consensus 87 ~~~~Gd~V~~~~~--------~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~-----~~~~~ 153 (327)
.+++||+|+++.. +|+|++|++++.+.++++|+++++++++.+++++.+||+++.+..++.. ...++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~ 154 (339)
T cd08249 75 RFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASK 154 (339)
T ss_pred cCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCC
Confidence 9999999999754 5899999999999999999999999999999999999999866654310 01258
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCC-Cc
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTG-IP 231 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~-~~ 231 (327)
+++++|+|++|.+|++++++|+++|+++++++++++.+.++.+|++.++++.+.+. ..+....++++|++||++|+ ..
T Consensus 155 ~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~ 234 (339)
T cd08249 155 GKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPES 234 (339)
T ss_pred CCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchH
Confidence 89999999999999999999999999999888778888889999999988766542 22222334679999999997 66
Q ss_pred ccccccccCC--CcEEEeecCCchhHHHHhhhhccccceeeEEEE------eCCCHHHHHHHHHHHHCCceeEecceeec
Q 020314 232 WSTFEPNLGT--TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFS------VSPKGENLDFLVKLVKEGKLKTVIDSKHS 303 (327)
Q Consensus 232 ~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 303 (327)
+..+++++++ +|+++.+|...... ................. .......++.+++++.++++.+.....++
T Consensus 235 ~~~~~~~l~~~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 312 (339)
T cd08249 235 AQLCAEALGRSGGGKLVSLLPVPEET--EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVE 312 (339)
T ss_pred HHHHHHHHhccCCCEEEEecCCCccc--cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecC
Confidence 8899999999 99999998664332 11112222222211111 11223567889999999999876656788
Q ss_pred --cccHHHHHHHHhcCC-CCccEEEeC
Q 020314 304 --LSKAEDAWAKSISGR-ATGKIIVEP 327 (327)
Q Consensus 304 --~~~~~~a~~~~~~~~-~~gkvvv~~ 327 (327)
++++++|++.+.+++ ..+|+|+++
T Consensus 313 ~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 313 GGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred CcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 999999999999998 889999874
No 68
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=3.5e-38 Score=278.50 Aligned_cols=308 Identities=22% Similarity=0.312 Sum_probs=243.5
Q ss_pred EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314 8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87 (327)
Q Consensus 8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 87 (327)
||+++.+.+. ++.+++++.+.|.+.++||+||+.++++|+.|++...|.++. +...|.++|||++|+|+. .+++.
T Consensus 1 ~a~~~~~~~~-~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~ 75 (323)
T TIGR02823 1 KALVVEKEDG-KVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV--VRSYPMIPGIDAAGTVVS--SEDPR 75 (323)
T ss_pred CeEEEccCCC-CcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC--CCCCCccceeeeEEEEEe--cCCCC
Confidence 6889988775 578999999999999999999999999999999998887632 124578999999999998 56778
Q ss_pred CCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhC--CccCCCCCCC-eEE
Q 020314 88 FKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG--VKLDGSGQQK-NIL 158 (327)
Q Consensus 88 ~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~--~~~~~~~~~~-~vl 158 (327)
+++||+|+++. ..|++++|..++.+.++++|+++++++++.+++.+.++++++....+ + .+++ +|+
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~-----~~~~~~vl 150 (323)
T TIGR02823 76 FREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGL-----TPEDGPVL 150 (323)
T ss_pred CCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCC-----CCCCceEE
Confidence 99999999864 36899999999999999999999999999999999999988754433 4 7888 999
Q ss_pred EEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccccccc
Q 020314 159 ITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237 (327)
Q Consensus 159 V~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~ 237 (327)
|+|++|.+|++++++|+++|++++++++ +++.+.++++|++.+++..+.+........ .++|+++||+|++.+..+++
T Consensus 151 I~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~d~vld~~g~~~~~~~~~ 229 (323)
T TIGR02823 151 VTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEK-ERWAGAVDTVGGHTLANVLA 229 (323)
T ss_pred EEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcC-CCceEEEECccHHHHHHHHH
Confidence 9999999999999999999999888774 466788899999888876543322222222 35999999999888889999
Q ss_pred ccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC--C---CHHHHHHHHHHHHCCceeEecceeeccccHHHHHH
Q 020314 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS--P---KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWA 312 (327)
Q Consensus 238 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~ 312 (327)
+++++|+++.+|.............+..++..+.+.... . ....++.+.+++..+.+... ...|+++++++|++
T Consensus 230 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~ 308 (323)
T TIGR02823 230 QLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TREITLEELPEALE 308 (323)
T ss_pred HhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHH
Confidence 999999999998643221111112222444444443221 1 12345667777778877654 45899999999999
Q ss_pred HHhcCCCCccEEEeC
Q 020314 313 KSISGRATGKIIVEP 327 (327)
Q Consensus 313 ~~~~~~~~gkvvv~~ 327 (327)
.+.+++..||+|+++
T Consensus 309 ~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 309 QILAGQHRGRTVVDV 323 (323)
T ss_pred HHhCCCccceEEEeC
Confidence 999999999999864
No 69
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=3.4e-38 Score=282.68 Aligned_cols=305 Identities=23% Similarity=0.319 Sum_probs=249.6
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||||++.+++.+ +++++.+.|++.+++|+||+.++++|+.|+....|.++ ..+|.++|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~ 73 (363)
T cd08279 1 MRAAVLHEVGKP---LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVT 73 (363)
T ss_pred CeEEEEecCCCC---ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCcc
Confidence 799999988754 88899999999999999999999999999999888763 35678999999999999999999
Q ss_pred CCCCCCEEEEE-----------------------------------------------ccCcccceeEeecCCceeeCCC
Q 020314 87 NFKVGDKVVAV-----------------------------------------------LSGGGLAEFAVAKESLTVARPQ 119 (327)
Q Consensus 87 ~~~~Gd~V~~~-----------------------------------------------~~~g~~a~~~~~~~~~~~~ip~ 119 (327)
.+++||+|++. ...|+|++|+.++++.++++|+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~ 153 (363)
T cd08279 74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD 153 (363)
T ss_pred ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence 99999999983 2358999999999999999999
Q ss_pred CCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcC
Q 020314 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLG 197 (327)
Q Consensus 120 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg 197 (327)
++++++++.+++++.+||+++....++ +++++|||+| +|++|++++++|+..|++ |++++++ ++.+.++.+|
T Consensus 154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~-----~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g 227 (363)
T cd08279 154 DIPLDRAALLGCGVTTGVGAVVNTARV-----RPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFG 227 (363)
T ss_pred CCChHHeehhcchhHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999998777777 8999999996 699999999999999996 8887754 6777888999
Q ss_pred CCEEEeCCCCC--cccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCch-hHHHHhhhhccccceeeEEE
Q 020314 198 ADEVLDYKTPD--GAALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPR-VLLTFAWKKLTFSKKQLVPF 273 (327)
Q Consensus 198 ~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 273 (327)
++.+++++..+ ..+.+...++++|+++|++++ ..+..++++++++|+++.++.... ....+....+.++...+.+.
T Consensus 228 ~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (363)
T cd08279 228 ATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGS 307 (363)
T ss_pred CeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEE
Confidence 98888876544 223344456779999999995 457899999999999999875431 22223333334444444443
Q ss_pred Ee--CCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEE
Q 020314 274 SV--SPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKII 324 (327)
Q Consensus 274 ~~--~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv 324 (327)
.. ....+.++.++++++++.+.+ .+.+.|++++++++++.+.+++..+.++
T Consensus 308 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 308 LYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred EecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 22 134678899999999999875 3667899999999999999888765544
No 70
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.2e-38 Score=280.48 Aligned_cols=302 Identities=24% Similarity=0.357 Sum_probs=244.0
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||+++++++++. ..+++.+.|.+.++||+||+.++++|++|++...|..+ ...|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~~~---~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~ 73 (338)
T PRK09422 1 MKAAVVNKDHTG---DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVT 73 (338)
T ss_pred CeEEEecCCCCC---ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCc
Confidence 799999987762 22788899999999999999999999999999888753 13467899999999999999999
Q ss_pred CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314 87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138 (327)
Q Consensus 87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 138 (327)
.+++||+|++.+ .+|++++|+.++.+.++++|+++++++++.++.++.|||+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~ 153 (338)
T PRK09422 74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK 153 (338)
T ss_pred cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence 999999998621 2589999999999999999999999999999999999999
Q ss_pred HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEec-CCcHHHHHhcCCCEEEeCCC-CC-cccccC
Q 020314 139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCG-ARNIELVKSLGADEVLDYKT-PD-GAALKS 214 (327)
Q Consensus 139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~-~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~-~~-~~~~~~ 214 (327)
++ ...++ +++++|||+| +|++|++++++|++ .|++++++++ +++++.++++|++.++++.. .+ .+.+..
T Consensus 154 ~~-~~~~~-----~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~ 226 (338)
T PRK09422 154 AI-KVSGI-----KPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQE 226 (338)
T ss_pred HH-HhcCC-----CCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHH
Confidence 98 67777 8999999999 79999999999998 5999999875 47888889999999888754 22 222222
Q ss_pred CCCCcccE-EEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCc
Q 020314 215 PSGRKYDA-VINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK 293 (327)
Q Consensus 215 ~~~~~~d~-v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 293 (327)
..+ ++|. ++++.++..+..++++++++|+++.+|..... ..+......++...+.+. ....++.++.+++++.++.
T Consensus 227 ~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~ 303 (338)
T PRK09422 227 KTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPES-MDLSIPRLVLDGIEVVGS-LVGTRQDLEEAFQFGAEGK 303 (338)
T ss_pred hcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCC-ceecHHHHhhcCcEEEEe-cCCCHHHHHHHHHHHHhCC
Confidence 222 6884 45555556689999999999999999854321 122223344455555552 2235678999999999999
Q ss_pred eeEecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 294 LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 294 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
+.+.+. .+++++++++++.+.++...||+++.
T Consensus 304 l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~ 335 (338)
T PRK09422 304 VVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVID 335 (338)
T ss_pred CCccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence 876554 68999999999999999999999985
No 71
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=5.2e-38 Score=279.00 Aligned_cols=303 Identities=23% Similarity=0.350 Sum_probs=246.4
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||||++++++ .+++.+.+.|.+.++||+|||.++++|+.|+....+.++. ..+|.++|+|++|+|+++|++++
T Consensus 1 ~~a~~~~~~~----~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~ 73 (337)
T cd08261 1 MKALVCEKPG----RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVA 73 (337)
T ss_pred CeEEEEeCCC----ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCC
Confidence 6899998754 3899999999999999999999999999999998887542 24578899999999999999999
Q ss_pred CCCCCCEEEEE---------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAV---------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~---------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
.+++||+|++. ...|+|++|..++++ ++++|+++++++++.+ ..+.+++++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~ 151 (337)
T cd08261 74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA 151 (337)
T ss_pred CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence 99999999872 236899999999999 9999999999999877 577888988
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPS 216 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~ 216 (327)
+ ...++ .++++|||+| +|.+|.+++++|+.+|++|+++++ +++.++++++|+++++++...+ ..+.+.+.
T Consensus 152 ~-~~~~l-----~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~ 224 (337)
T cd08261 152 V-RRAGV-----TAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTD 224 (337)
T ss_pred H-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhC
Confidence 8 67777 8999999996 799999999999999999998874 4677788899999999877654 23334455
Q ss_pred CCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314 217 GRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295 (327)
Q Consensus 217 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 295 (327)
++++|++||++|+. .+..++++++++|+++.++..... .......+..+...+.+. .....+.++.++++++++.++
T Consensus 225 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~i~ 302 (337)
T cd08261 225 GEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP-VTFPDPEFHKKELTILGS-RNATREDFPDVIDLLESGKVD 302 (337)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC-CccCHHHHHhCCCEEEEe-ccCChhhHHHHHHHHHcCCCC
Confidence 67799999999864 578889999999999998754321 111122223333444432 234567889999999999998
Q ss_pred E--ecceeeccccHHHHHHHHhcCC-CCccEEEeC
Q 020314 296 T--VIDSKHSLSKAEDAWAKSISGR-ATGKIIVEP 327 (327)
Q Consensus 296 ~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~ 327 (327)
+ .+...+++++++++++.+.+++ ..+|+|+++
T Consensus 303 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 303 PEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 7 6667899999999999999884 778999864
No 72
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=9.8e-38 Score=278.71 Aligned_cols=317 Identities=36% Similarity=0.504 Sum_probs=249.8
Q ss_pred eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCC------------CCCCCCCeeeccc
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRP------------FLPRKFPFIPASD 73 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~------------~~~~~~p~~~G~e 73 (327)
|||++++++|++.+.+++++.+.|.| .++||+||++++++|++|++...|.... +....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 78999998887544588899999988 4999999999999999999988874210 0013568899999
Q ss_pred ceEEEEecCCCCCCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCC
Q 020314 74 VAGEVIGLGSEVKNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDG 150 (327)
Q Consensus 74 ~~G~V~~vG~~~~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~ 150 (327)
++|+|+.+|++++++++||||+++. ..|+|++|+.++++.++++|+++++++++.+++++.++|+++.+...+.. .
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-~ 159 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNP-K 159 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCC-c
Confidence 9999999999999999999999864 36999999999999999999999999999999999999999977766510 0
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCC
Q 020314 151 SGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 151 ~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~ 229 (327)
.++|++|+|+|++|++|++++++|+++|++|++++++++.+.++.+|.+.+++....+. ..+ ...+++|++||++|+
T Consensus 160 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l--~~~~~vd~vi~~~g~ 237 (350)
T cd08248 160 NAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEEL--TERGKFDVILDTVGG 237 (350)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHH--HhcCCCCEEEECCCh
Confidence 02499999999999999999999999999999888667777888999988887655332 111 123579999999998
Q ss_pred CcccccccccCCCcEEEeecCCchh---H--H--HHhhhhcccccee---------eEEEEeCCCHHHHHHHHHHHHCCc
Q 020314 230 IPWSTFEPNLGTTGKVIDFNPSPRV---L--L--TFAWKKLTFSKKQ---------LVPFSVSPKGENLDFLVKLVKEGK 293 (327)
Q Consensus 230 ~~~~~~~~~l~~~G~~v~~g~~~~~---~--~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~ 293 (327)
+....++++++++|+++.+|..... . . ......+.+.... +.........+.+.++++++.++.
T Consensus 238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 317 (350)
T cd08248 238 DTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGK 317 (350)
T ss_pred HHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCC
Confidence 8888999999999999998743210 0 0 0000111111111 111112345678999999999999
Q ss_pred eeEecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 294 LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 294 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
+.+.+.+.|++++++++++.+.++...+|+++.
T Consensus 318 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 318 IKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred EecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 988888899999999999999988888898863
No 73
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=4.7e-38 Score=282.20 Aligned_cols=307 Identities=18% Similarity=0.178 Sum_probs=242.8
Q ss_pred cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
.+||+.++.+.++. +++++.+.|++.++||+||+.++|+|++|++...|.+. ..+|.++|||++|+|+++|++
T Consensus 6 ~~~~a~~~~~~~~~---~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~ 78 (373)
T cd08299 6 IKCKAAVLWEPKKP---FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV----TPFPVILGHEAAGIVESVGEG 78 (373)
T ss_pred ceeEEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC----CCCCccccccceEEEEEeCCC
Confidence 45899999876553 88999999999999999999999999999999988752 356889999999999999999
Q ss_pred CCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCceee
Q 020314 85 VKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTVA 116 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~~ 116 (327)
++.+++||+|+... ..|+|++|.+++++.+++
T Consensus 79 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~ 158 (373)
T cd08299 79 VTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAK 158 (373)
T ss_pred CccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceee
Confidence 99999999998751 248899999999999999
Q ss_pred CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHH
Q 020314 117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVK 194 (327)
Q Consensus 117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~ 194 (327)
+|+++++++++.+++++.++|+++.+..++ +++++|+|+| +|++|++++++|+.+|+ +|+++++ +++++.++
T Consensus 159 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~ 232 (373)
T cd08299 159 IDAAAPLEKVCLIGCGFSTGYGAAVNTAKV-----TPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK 232 (373)
T ss_pred CCCCCChHHhheeccchHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 999999999999999999999998777777 8999999996 79999999999999999 7988874 47888889
Q ss_pred hcCCCEEEeCCCCC----cccccCCCCCcccEEEeCCCCCc-ccccccc-cCCCcEEEeecCCchh-HHHHhhhhccccc
Q 020314 195 SLGADEVLDYKTPD----GAALKSPSGRKYDAVINCVTGIP-WSTFEPN-LGTTGKVIDFNPSPRV-LLTFAWKKLTFSK 267 (327)
Q Consensus 195 ~lg~~~v~~~~~~~----~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~-l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~ 267 (327)
++|++.+++..+.+ ..+.+.+. +++|+++||+|++. +..++.. ++++|+++.+|..... ...+... ...+.
T Consensus 233 ~lGa~~~i~~~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~ 310 (373)
T cd08299 233 ELGATECINPQDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTG 310 (373)
T ss_pred HcCCceEecccccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcC
Confidence 99999988876432 12223333 57999999999644 6665654 4679999999854321 1112111 12234
Q ss_pred eeeEEEEeC--CCHHHHHHHHHHHHCCce--eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 268 KQLVPFSVS--PKGENLDFLVKLVKEGKL--KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 268 ~~~~~~~~~--~~~~~~~~~~~~~~~g~l--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
..+.+.... .+.+.+.++++.+.++.+ ++.+.+.|++++++++++.+.+++. .|+++.+
T Consensus 311 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 311 RTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred CeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 455553332 234677778787777754 4457789999999999999987765 4777754
No 74
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=6.4e-38 Score=279.13 Aligned_cols=303 Identities=25% Similarity=0.352 Sum_probs=248.6
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||+|++++++. +.+++.+.|++.+++|+||+.++++|+.|+....|.++ +...|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~----~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~ 73 (343)
T cd08235 1 MKAAVLHGPND----VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVT 73 (343)
T ss_pred CeEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCC
Confidence 68999988764 88999999999999999999999999999999888753 124577999999999999999999
Q ss_pred CCCCCCEEEEEc---------------------------cCcccceeEeecCCc-----eeeCCCCCChhhhcccCchHH
Q 020314 87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESL-----TVARPQEVSAAEGAGIPCAGL 134 (327)
Q Consensus 87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~-----~~~ip~~~~~~~aa~~~~~~~ 134 (327)
.+++||+|+++. ..|+|++|+.++... ++++|+++++.+++.+ .++.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ 152 (343)
T cd08235 74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA 152 (343)
T ss_pred CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence 999999999852 358999999999998 9999999999999876 7888
Q ss_pred HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCc--c
Q 020314 135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDG--A 210 (327)
Q Consensus 135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--~ 210 (327)
+||+++. ..++ +++++|+|+| +|++|++++++|+..|++ ++++++ +++.+.+..+|.+.++++++.+. .
T Consensus 153 ~a~~~l~-~~~~-----~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~ 225 (343)
T cd08235 153 CCINAQR-KAGI-----KPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEK 225 (343)
T ss_pred HHHHHHH-hcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHH
Confidence 9999994 4477 8999999997 799999999999999998 877764 46777778899998888776552 2
Q ss_pred cccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314 211 ALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL 288 (327)
Q Consensus 211 ~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
+.....++++|+++||+++. .+..++++++++|+++.++..... ...+....+.++..++.+. .....+.++.++++
T Consensus 226 i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l 304 (343)
T cd08235 226 VRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGS-YAASPEDYKEALEL 304 (343)
T ss_pred HHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEE-ecCChhhHHHHHHH
Confidence 33445667799999999965 578889999999999998854321 1222234455677766653 33456788999999
Q ss_pred HHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 289 VKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 289 ~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
++.+.++ +.+...|++++++++++.+.+++ .||+|+.
T Consensus 305 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 305 IASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred HHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 9999986 34556899999999999999999 8999873
No 75
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=5.4e-38 Score=277.28 Aligned_cols=308 Identities=26% Similarity=0.378 Sum_probs=249.2
Q ss_pred EeccCCC-ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCC
Q 020314 12 YDSYGGG-VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKV 90 (327)
Q Consensus 12 ~~~~g~~-~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 90 (327)
++.++.+ ++.+++++.+.|++.+++|+||+.++++|+.|...+.|.... ...+|.++|+|++|+|+++|++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 80 (323)
T cd05282 3 YTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLV 80 (323)
T ss_pred eCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCC
Confidence 3445542 236888898999999999999999999999999988776532 1246789999999999999999999999
Q ss_pred CCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHH
Q 020314 91 GDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYA 170 (327)
Q Consensus 91 Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~ 170 (327)
||+|++....|+|++|+.++...++++|+++++.+++.+++.+.++|+++....++ .++++|||+|++|.+|+++
T Consensus 81 Gd~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~-----~~~~~vlI~g~~~~vg~~~ 155 (323)
T cd05282 81 GQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKL-----PPGDWVIQNAANSAVGRML 155 (323)
T ss_pred CCEEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccC-----CCCCEEEEcccccHHHHHH
Confidence 99999965479999999999999999999999999999999999999999777777 7899999999999999999
Q ss_pred HHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEe
Q 020314 171 VQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVID 247 (327)
Q Consensus 171 ~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~ 247 (327)
+++|+++|++++++++ +++.+.++++|++.++++...+ ..+.+.+.++++|+++||+|+.....++++++++|+++.
T Consensus 156 ~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~ 235 (323)
T cd05282 156 IQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVN 235 (323)
T ss_pred HHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEE
Confidence 9999999999998875 4677888899999988876544 234455667789999999998877788999999999999
Q ss_pred ecCCchhHHHHhhhhccccceeeEEEEeCC-----C----HHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCC
Q 020314 248 FNPSPRVLLTFAWKKLTFSKKQLVPFSVSP-----K----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGR 318 (327)
Q Consensus 248 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~ 318 (327)
+|........+....+..++..+.+..... . .+.++.+++++.++.+.+.+.+.|++++++++++.+.+++
T Consensus 236 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~ 315 (323)
T cd05282 236 YGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPG 315 (323)
T ss_pred EccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCC
Confidence 885432211111111122344444322211 1 2467889999999999877778899999999999999988
Q ss_pred CCccEEEe
Q 020314 319 ATGKIIVE 326 (327)
Q Consensus 319 ~~gkvvv~ 326 (327)
..||++++
T Consensus 316 ~~~kvv~~ 323 (323)
T cd05282 316 RGGKVLLT 323 (323)
T ss_pred CCceEeeC
Confidence 88999874
No 76
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.8e-37 Score=275.35 Aligned_cols=311 Identities=32% Similarity=0.451 Sum_probs=258.2
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||||+++..+. ++.+++++.+.|.+.++|++|++.++++|+.|++...|.++.. ...|.++|||++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~ 77 (336)
T cd08276 1 MKAWRLSGGGG-LDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVT 77 (336)
T ss_pred CeEEEEeccCC-CcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCc
Confidence 79999987753 4668888888888999999999999999999999988876421 13678899999999999999999
Q ss_pred CCCCCCEEEEEcc---------------------CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhC
Q 020314 87 NFKVGDKVVAVLS---------------------GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG 145 (327)
Q Consensus 87 ~~~~Gd~V~~~~~---------------------~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~ 145 (327)
++++||+|++... .|+|++|..++.+.++++|+++++.+++.+++++.+||+++....+
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~ 157 (336)
T cd08276 78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP 157 (336)
T ss_pred CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence 9999999998641 6889999999999999999999999999999999999999977777
Q ss_pred CccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC-CC--cccccCCCCCccc
Q 020314 146 VKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT-PD--GAALKSPSGRKYD 221 (327)
Q Consensus 146 ~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~-~~--~~~~~~~~~~~~d 221 (327)
+ +++++|+|+| +|++|+++++++++.|+++++++++ ++.+.+..+|.+.+++... .+ ..+...++++++|
T Consensus 158 ~-----~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 231 (336)
T cd08276 158 L-----KPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVD 231 (336)
T ss_pred C-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCc
Confidence 7 8999999996 8999999999999999999988854 6777787889998888765 33 2344456667899
Q ss_pred EEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEeccee
Q 020314 222 AVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSK 301 (327)
Q Consensus 222 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~ 301 (327)
+++|++++.....++++++++|+++.+|................++..+.+.. ......++++++++.++.+.+.....
T Consensus 232 ~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~l~~~~~~~ 310 (336)
T cd08276 232 HVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIA-VGSRAQFEAMNRAIEAHRIRPVIDRV 310 (336)
T ss_pred EEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEe-cCcHHHHHHHHHHHHcCCcccccCcE
Confidence 99999997778899999999999999986543221222334455666666643 23467888999999999888777788
Q ss_pred eccccHHHHHHHHhcCCCCccEEEeC
Q 020314 302 HSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 302 ~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++++++++++.+.+++..||+++++
T Consensus 311 ~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 311 FPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred EeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 99999999999999988889999864
No 77
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.1e-37 Score=274.86 Aligned_cols=307 Identities=27% Similarity=0.299 Sum_probs=245.5
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||++++...+. ++.+++.+.+.|.+.++||+||+.++++|+.|++...|..+ ....|.++|||++|+|+++|. .
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~ 74 (320)
T cd08243 1 MKAIVIEQPGG-PEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--G 74 (320)
T ss_pred CeEEEEcCCCC-ccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--C
Confidence 68999987664 45678888888889999999999999999999998888653 124578899999999999995 5
Q ss_pred CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314 87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT 160 (327)
Q Consensus 87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~ 160 (327)
.+++||+|+++. .+|+|++|+.++...++++|+++++++++.++.++.+||+++.+..++ +++++|||+
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~g~~vlV~ 149 (320)
T cd08243 75 TFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGL-----QPGDTLLIR 149 (320)
T ss_pred CCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCC-----CCCCEEEEE
Confidence 799999999864 248999999999999999999999999999999999999999877777 889999999
Q ss_pred cCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccccccccc
Q 020314 161 AASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL 239 (327)
Q Consensus 161 g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l 239 (327)
|++|++|++++++|++.|++|+++++ +++.+.++++|++.+++........+... ++++|+++|++|+..+..+++++
T Consensus 150 ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~d~vl~~~~~~~~~~~~~~l 228 (320)
T cd08243 150 GGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAA-PGGFDKVLELVGTATLKDSLRHL 228 (320)
T ss_pred cCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHh-CCCceEEEECCChHHHHHHHHHh
Confidence 99999999999999999999998885 46778888899988875432112222222 57899999999987788999999
Q ss_pred CCCcEEEeecCCchhHH--HHhhhhc--cccceeeEEEEe-CCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314 240 GTTGKVIDFNPSPRVLL--TFAWKKL--TFSKKQLVPFSV-SPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS 314 (327)
Q Consensus 240 ~~~G~~v~~g~~~~~~~--~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~ 314 (327)
+++|+++.+|....... ....... ..++..+.+... ......++.++++++.+.+++.+.+.|++++++++++.+
T Consensus 229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~ 308 (320)
T cd08243 229 RPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYM 308 (320)
T ss_pred ccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHH
Confidence 99999999985321100 0000111 123333333221 122456888999999999987777889999999999999
Q ss_pred hcCCCCccEEE
Q 020314 315 ISGRATGKIIV 325 (327)
Q Consensus 315 ~~~~~~gkvvv 325 (327)
.+++..||+++
T Consensus 309 ~~~~~~~kvvv 319 (320)
T cd08243 309 ESNRAFGKVVV 319 (320)
T ss_pred HhCCCCCcEEe
Confidence 99988899886
No 78
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=9.3e-38 Score=276.50 Aligned_cols=310 Identities=32% Similarity=0.413 Sum_probs=248.7
Q ss_pred ceEEEEEeccCCC-ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 6 VMHAVQYDSYGGG-VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 6 ~~~a~~~~~~g~~-~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
+||+|++.++++. ++.+++++.+.|.+.++||+||+.++|+|+.|++...|.++.. ..+|.++|+|++|+|+.+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~ 78 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEG 78 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCC
Confidence 5999999997752 4668899999999999999999999999999999988875321 256789999999999999999
Q ss_pred CCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCC
Q 020314 85 VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASG 164 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g 164 (327)
++.+++||+|++. ..|+|++|++++.+.++++|++ ..+++.++.++.+||+++.+..++ +++++++|+|++|
T Consensus 79 v~~~~~Gd~V~~~-~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~-----~~~~~vlI~ga~g 150 (329)
T cd08250 79 VTDFKVGDAVATM-SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEM-----KSGETVLVTAAAG 150 (329)
T ss_pred CCCCCCCCEEEEe-cCcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCC-----CCCCEEEEEeCcc
Confidence 9999999999984 4689999999999999999997 356788899999999999877777 8999999999999
Q ss_pred hHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCCCcccccccccCCC
Q 020314 165 AVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTT 242 (327)
Q Consensus 165 ~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~ 242 (327)
.+|++++++|+..|+++++++++ ++.+.++++|++.+++....+. ..+....++++|++||++|+..+..++++++++
T Consensus 151 ~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~ 230 (329)
T cd08250 151 GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALK 230 (329)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccC
Confidence 99999999999999999988854 6777888899988887665442 222222346799999999987788999999999
Q ss_pred cEEEeecCCchh----------HHHHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCceeEe--cceeecccc
Q 020314 243 GKVIDFNPSPRV----------LLTFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKTV--IDSKHSLSK 306 (327)
Q Consensus 243 G~~v~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~ 306 (327)
|+++.+|..... ...+ ......++..+.+..... ..+.+..+++++.++.+.+. ..+.+++++
T Consensus 231 g~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 309 (329)
T cd08250 231 GRLIVIGFISGYQSGTGPSPVKGATL-PPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLES 309 (329)
T ss_pred CeEEEEecccCCcccCcccccccccc-cHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHH
Confidence 999999854321 0011 111223334444432211 24567889999999998863 345699999
Q ss_pred HHHHHHHHhcCCCCccEEEe
Q 020314 307 AEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 307 ~~~a~~~~~~~~~~gkvvv~ 326 (327)
+++|++.+.+++..||++++
T Consensus 310 ~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 310 VADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHcCCCCceEEeC
Confidence 99999999998888999874
No 79
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=8.7e-38 Score=278.87 Aligned_cols=304 Identities=23% Similarity=0.326 Sum_probs=241.3
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCC------CCCCCCeeecccceEEEEe
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF------LPRKFPFIPASDVAGEVIG 80 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~------~~~~~p~~~G~e~~G~V~~ 80 (327)
|||+++.++++ +++++.+.|++.+++|+||+.++|+|+.|++...|..... ....+|..+|||++|+|++
T Consensus 1 mka~~~~~~~~----~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~ 76 (350)
T cd08256 1 MRAVVCHGPQD----YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE 76 (350)
T ss_pred CeeEEEecCCc----eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence 68999986654 8999999999999999999999999999999888863110 0114577899999999999
Q ss_pred cCCCCC--CCCCCCEEEEE--------------------------c---cCcccceeEeecCC-ceeeCCCCCChhhhcc
Q 020314 81 LGSEVK--NFKVGDKVVAV--------------------------L---SGGGLAEFAVAKES-LTVARPQEVSAAEGAG 128 (327)
Q Consensus 81 vG~~~~--~~~~Gd~V~~~--------------------------~---~~g~~a~~~~~~~~-~~~~ip~~~~~~~aa~ 128 (327)
+|++++ ++++||+|++. . ..|+|++|+.++++ .++++|+++++++++.
T Consensus 77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~ 156 (350)
T cd08256 77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL 156 (350)
T ss_pred eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence 999998 99999999872 1 36899999999988 5789999999999998
Q ss_pred cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCC
Q 020314 129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~ 206 (327)
+ .++.++|+++ +..++ +++++|+|.| +|++|++++++|+++|++ ++++++ +++.++++++|++.++++..
T Consensus 157 ~-~~~~ta~~a~-~~~~~-----~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~ 228 (350)
T cd08256 157 I-EPLACALHAV-DRANI-----KFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE 228 (350)
T ss_pred h-hHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCC
Confidence 8 8889999998 77777 8999999954 799999999999999985 455554 46778889999998888765
Q ss_pred CC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhc-cccceeeEEEEeCCCHHHH
Q 020314 207 PD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKL-TFSKKQLVPFSVSPKGENL 282 (327)
Q Consensus 207 ~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 282 (327)
.+ ..+.+.+.+.++|++||++|+. .+..++++++++|+++.+|..... ..+....+ ..+++.+.+.. .....+
T Consensus 229 ~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~--~~~~~~ 305 (350)
T cd08256 229 VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP-VTVDWSIIGDRKELDVLGSH--LGPYCY 305 (350)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC-CccChhHhhcccccEEEEec--cCchhH
Confidence 44 2344455667899999999964 578899999999999999854321 11111111 23344444422 223468
Q ss_pred HHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 283 DFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 283 ~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
++++++++++.+++ .+.+.|+++++++|++.+++++..+|+++
T Consensus 306 ~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 306 PIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 88999999999986 36788999999999999999988888874
No 80
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.4e-37 Score=276.34 Aligned_cols=308 Identities=28% Similarity=0.406 Sum_probs=255.2
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||++++.+++++ . +.+++.+.|.+.+++|+|++.++++|+.|+....|.++. ...+|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~~~~~g~~~~G~v~~~G~~v~ 76 (338)
T cd08254 1 MKAWRFHKGSKG-L-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKLPLTLGHEIAGTVVEVGAGVT 76 (338)
T ss_pred CeeEEEecCCCC-c-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcc--cCCCCEeccccccEEEEEECCCCc
Confidence 799999988873 3 688888988999999999999999999999999887641 235678999999999999999999
Q ss_pred CCCCCCEEEE------------------Ec---------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVA------------------VL---------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~------------------~~---------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
++++||+|++ ++ ..|+|++|+.++.+.++++|+++++.+++.++.++.+||++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~ 156 (338)
T cd08254 77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA 156 (338)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 9999999986 11 25899999999999999999999999999999999999999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPSG 217 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~ 217 (327)
+.+..++ +++++|||.| +|++|++++++|+..|++|++++++ ++.+.++++|.+.+++..+... .......+
T Consensus 157 l~~~~~~-----~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd08254 157 VVRAGEV-----KPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLG 230 (338)
T ss_pred HHhccCC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcC
Confidence 9777777 8899999976 7999999999999999999888754 6777888899988887665442 22244566
Q ss_pred CcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE
Q 020314 218 RKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT 296 (327)
Q Consensus 218 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 296 (327)
+++|+++||+|.. .+..++++|+++|+++.+|..... ..+....+..++..+.+ +.....+.++.++++++++.+.+
T Consensus 231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~~l~~ 308 (338)
T cd08254 231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK-LTVDLSDLIARELRIIG-SFGGTPEDLPEVLDLIAKGKLDP 308 (338)
T ss_pred CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC-CccCHHHHhhCccEEEE-eccCCHHHHHHHHHHHHcCCCcc
Confidence 7899999999855 588899999999999999854321 11222344455555555 33445778899999999999886
Q ss_pred ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 297 VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 297 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
. .+.+++++++++++.+.+++..||+|++|
T Consensus 309 ~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 309 Q-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred c-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 6 57899999999999999999999999876
No 81
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6.6e-38 Score=280.79 Aligned_cols=302 Identities=20% Similarity=0.225 Sum_probs=246.9
Q ss_pred EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314 8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87 (327)
Q Consensus 8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 87 (327)
||+++.+++.. +++++.+.|.+.+++|+||+.++++|+.|++...|.++ ..+|.++|||++|+|+++|+++++
T Consensus 2 ~a~~~~~~~~~---~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~ 74 (365)
T cd05279 2 KAAVLWEKGKP---LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTT 74 (365)
T ss_pred ceeEEecCCCC---cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCccc
Confidence 68888877654 88999999999999999999999999999999888753 346789999999999999999999
Q ss_pred CCCCCEEEEEc------------------------------------------------cCcccceeEeecCCceeeCCC
Q 020314 88 FKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTVARPQ 119 (327)
Q Consensus 88 ~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~~ip~ 119 (327)
+++||+|++.. ..|+|++|+.++++.++++|+
T Consensus 75 ~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 154 (365)
T cd05279 75 LKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDP 154 (365)
T ss_pred CCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCC
Confidence 99999998752 136899999999999999999
Q ss_pred CCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEe-cCCcHHHHHhcC
Q 020314 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATC-GARNIELVKSLG 197 (327)
Q Consensus 120 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~-~~~~~~~~~~lg 197 (327)
++++++++.+.+++.++|+++....++ +++++|||+| +|++|++++++|+++|++ ++++. ++++.+.++++|
T Consensus 155 ~~~~~~a~~~~~~~~ta~~al~~~~~~-----~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g 228 (365)
T cd05279 155 DAPLEKVCLIGCGFSTGYGAAVNTAKV-----TPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLG 228 (365)
T ss_pred CCCHHHhhHhccchhHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999998777777 8999999996 799999999999999995 66666 457888889999
Q ss_pred CCEEEeCCCC--C--cccccCCCCCcccEEEeCCCC-CcccccccccC-CCcEEEeecCCc-hhHHHHhhhhccccceee
Q 020314 198 ADEVLDYKTP--D--GAALKSPSGRKYDAVINCVTG-IPWSTFEPNLG-TTGKVIDFNPSP-RVLLTFAWKKLTFSKKQL 270 (327)
Q Consensus 198 ~~~v~~~~~~--~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~ 270 (327)
++.+++..+. + ..+.+.+ ++++|+++|++|. ..+..++++++ ++|+++.+|... .....+....+ .+...+
T Consensus 229 ~~~~v~~~~~~~~~~~~l~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l 306 (365)
T cd05279 229 ATECINPRDQDKPIVEVLTEMT-DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTI 306 (365)
T ss_pred CCeecccccccchHHHHHHHHh-CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeE
Confidence 9998887655 3 1233334 4689999999985 55888999999 999999988542 22233333344 455556
Q ss_pred EEEEe--CCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 271 VPFSV--SPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 271 ~~~~~--~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
.+.+. ....+.+..++++++++.++. .+.++++++++++|++.+.+++.. |+++
T Consensus 307 ~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 307 KGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred EEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 55332 235678899999999999874 577889999999999999887664 6654
No 82
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=9e-38 Score=278.27 Aligned_cols=303 Identities=23% Similarity=0.315 Sum_probs=244.7
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCC-CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPN-KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
||+|++..++ .+++++.+.|+|. ++||+||+.++++|+.|++...|.++ ..+|.++|+|++|+|+++|+++
T Consensus 1 ~~a~~~~~~~----~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v 72 (344)
T cd08284 1 MKAVVFKGPG----DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEV 72 (344)
T ss_pred CeeEEEecCC----CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCc
Confidence 6899997653 4999999999975 99999999999999999999888753 2457899999999999999999
Q ss_pred CCCCCCCEEEEEc-------------------------------cCcccceeEeecCC--ceeeCCCCCChhhhcccCch
Q 020314 86 KNFKVGDKVVAVL-------------------------------SGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCA 132 (327)
Q Consensus 86 ~~~~~Gd~V~~~~-------------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~ 132 (327)
+++++||+|++.. .+|++++|+.++++ .++++|+++++++++.++.+
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~ 152 (344)
T cd08284 73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI 152 (344)
T ss_pred cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence 9999999999753 14899999999975 99999999999999999999
Q ss_pred HHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCC--
Q 020314 133 GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPD-- 208 (327)
Q Consensus 133 ~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~-- 208 (327)
++|||+++. ..++ .++++|||+| +|++|++++++|+.+|+ +++++++. ++.++++++|+. .++.+..+
T Consensus 153 ~~ta~~~~~-~~~~-----~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~ 224 (344)
T cd08284 153 LPTGYFGAK-RAQV-----RPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPV 224 (344)
T ss_pred hHHHHhhhH-hcCC-----ccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHH
Confidence 999999995 4666 7899999997 79999999999999997 88888644 677788889975 45554433
Q ss_pred cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHH
Q 020314 209 GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK 287 (327)
Q Consensus 209 ~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
..+.+.+.++++|++||++++. .+..++++++++|+++.+|................++..+.. ......+.++.+++
T Consensus 225 ~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 303 (344)
T cd08284 225 ERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRF-GRCPVRSLFPELLP 303 (344)
T ss_pred HHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEE-ecCCcchhHHHHHH
Confidence 2344455667899999999964 588999999999999999865422222222223334444443 22345678999999
Q ss_pred HHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 288 LVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 288 ~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++++.+.+ ++.+.+++++++++++.+.+++. ||+|+.+
T Consensus 304 ~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~~ 344 (344)
T cd08284 304 LLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLDP 344 (344)
T ss_pred HHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEecC
Confidence 999999875 46678999999999999998887 9999864
No 83
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=9.6e-38 Score=277.68 Aligned_cols=307 Identities=22% Similarity=0.301 Sum_probs=241.4
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||+|++.++++ .+++.+.+.|.+.++||+||++++++|++|++++.+.........+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~ 77 (341)
T PRK05396 1 MKALVKLKAEP---GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT 77 (341)
T ss_pred CceEEEecCCC---ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence 68999987664 499999999999999999999999999999998766421111124577899999999999999999
Q ss_pred CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
++++||+|++.. .+|+|++|+.++.+.++++|+++++++++.+ .++.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~ 156 (341)
T PRK05396 78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT 156 (341)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence 999999998752 3689999999999999999999999888754 565666665
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSP 215 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~ 215 (327)
+.. .. .+|++|+|.| +|++|++++++|+++|+ +++++.+ +++.+.++++|++.++++++.+ ..+...+
T Consensus 157 ~~~--~~-----~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 228 (341)
T PRK05396 157 ALS--FD-----LVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELG 228 (341)
T ss_pred HHc--CC-----CCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhc
Confidence 532 22 5899999987 79999999999999999 5777763 4677888999999998877654 2233445
Q ss_pred CCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC-c
Q 020314 216 SGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG-K 293 (327)
Q Consensus 216 ~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~ 293 (327)
.++++|++|||.|+. .+..++++++++|+++.+|..... ..+....+.++.+.+.++......+.+..+++++.++ +
T Consensus 229 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 307 (341)
T PRK05396 229 MTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD-MAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLD 307 (341)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-CcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCC
Confidence 567899999999864 478899999999999999864321 1222356666777776643222334566788889888 4
Q ss_pred eeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 294 LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 294 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+.+.+.+.+++++++++++.+.+++ .||+++++
T Consensus 308 ~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 308 LSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred hhHheEEEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence 5556668899999999999999877 79999863
No 84
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.3e-37 Score=275.71 Aligned_cols=305 Identities=23% Similarity=0.281 Sum_probs=244.8
Q ss_pred eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
||+++++++++ +++++.+.|+| .++||+||++++++|+.|+..+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v 73 (345)
T cd08286 1 MKALVYHGPGK----ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAV 73 (345)
T ss_pred CceEEEecCCc----eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCc
Confidence 78999987654 89999999885 8999999999999999999999887642 2447899999999999999999
Q ss_pred CCCCCCCEEEEEc----------------------------cCcccceeEeecCC--ceeeCCCCCChhhhcccCchHHH
Q 020314 86 KNFKVGDKVVAVL----------------------------SGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCAGLT 135 (327)
Q Consensus 86 ~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~t 135 (327)
+.+++||+|+... .+|+|++|+.++.+ .++++|++++..+++.++..+++
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t 153 (345)
T cd08286 74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT 153 (345)
T ss_pred cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence 9999999998743 13889999999987 89999999999999999999999
Q ss_pred HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--ccc
Q 020314 136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIELVKSLGADEVLDYKTPD--GAA 211 (327)
Q Consensus 136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~ 211 (327)
||+++....++ .++++|||.| +|.+|.+++|+|+.+| .+++++.++ ++.++++++|++.++++.+.+ ..+
T Consensus 154 a~~~~~~~~~~-----~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i 227 (345)
T cd08286 154 GYECGVLNGKV-----KPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQV 227 (345)
T ss_pred HHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHH
Confidence 99987677777 8899999987 6999999999999999 688887644 577888899999998876544 223
Q ss_pred ccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHH
Q 020314 212 LKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK 290 (327)
Q Consensus 212 ~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
...+.++++|++|||+|+. .+..++++++++|+++.+|..... ..+....+..++..+.+.. ...+.++.++++++
T Consensus 228 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 304 (345)
T cd08286 228 LELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKP-VDLHLEKLWIKNITITTGL--VDTNTTPMLLKLVS 304 (345)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCC-CCcCHHHHhhcCcEEEeec--CchhhHHHHHHHHH
Confidence 4445667899999999864 477888999999999999854321 2222222233444444321 12356888999999
Q ss_pred CCceeE--ecceeeccccHHHHHHHHhcCCC--CccEEEeC
Q 020314 291 EGKLKT--VIDSKHSLSKAEDAWAKSISGRA--TGKIIVEP 327 (327)
Q Consensus 291 ~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~--~gkvvv~~ 327 (327)
.+.+++ ++.++|++++++++++.+..... ..|++|+|
T Consensus 305 ~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 305 SGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred cCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 999875 35688999999999999987643 34999875
No 85
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2e-37 Score=275.74 Aligned_cols=305 Identities=20% Similarity=0.248 Sum_probs=243.4
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC--------CCCCCCCeeecccceEEE
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP--------FLPRKFPFIPASDVAGEV 78 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~--------~~~~~~p~~~G~e~~G~V 78 (327)
|||+++.+. .+++++.+.|++.++||+||+.++++|+.|++...|.... .....+|.++|+|++|+|
T Consensus 1 m~a~~~~~~-----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 75 (341)
T cd08262 1 MRAAVFRDG-----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV 75 (341)
T ss_pred CceEEEeCC-----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence 689999754 3999999999999999999999999999999998873210 011245789999999999
Q ss_pred EecCCCCCC-CCCCCEEEEEc-----------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHH
Q 020314 79 IGLGSEVKN-FKVGDKVVAVL-----------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL 140 (327)
Q Consensus 79 ~~vG~~~~~-~~~Gd~V~~~~-----------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al 140 (327)
+++|+++++ +++||+|++.+ ..|+|++|+.++.+.++++|+++++++++ ++.++.+||+++
T Consensus 76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~ 154 (341)
T cd08262 76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV 154 (341)
T ss_pred EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence 999999987 99999999863 46899999999999999999999999877 667888999986
Q ss_pred HHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeE-EEEe-cCCcHHHHHhcCCCEEEeCCCCCc-----cccc
Q 020314 141 TQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV-TATC-GARNIELVKSLGADEVLDYKTPDG-----AALK 213 (327)
Q Consensus 141 ~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v-~~~~-~~~~~~~~~~lg~~~v~~~~~~~~-----~~~~ 213 (327)
...++ +++++|||+| +|++|.+++|+|+.+|+++ +++. ++++.++++++|++.+++++..+. ....
T Consensus 155 -~~~~~-----~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~ 227 (341)
T cd08262 155 -RRARL-----TPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELA 227 (341)
T ss_pred -HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHH
Confidence 77777 8999999997 6999999999999999974 4444 346788889999988888765431 1233
Q ss_pred CCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314 214 SPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG 292 (327)
Q Consensus 214 ~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 292 (327)
...++++|+++|++|+. .+..++++++++|+++.+|....... .......+++.++.+ +.....+.+++++++++++
T Consensus 228 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g 305 (341)
T cd08262 228 RAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDN-IEPALAIRKELTLQF-SLGYTPEEFADALDALAEG 305 (341)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCc-cCHHHHhhcceEEEE-EecccHHHHHHHHHHHHcC
Confidence 45567899999999874 57888999999999999985422111 111111345555554 3334566889999999999
Q ss_pred ceeE--ecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314 293 KLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 293 ~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
.+.+ .+.+.+++++++++++.+.+++..||+|++
T Consensus 306 ~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 306 KVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 9875 446789999999999999999999999975
No 86
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=3.7e-37 Score=276.95 Aligned_cols=302 Identities=23% Similarity=0.292 Sum_probs=240.5
Q ss_pred eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
||+|++.+++ .+++++.++|.+ .++||+||+.++++|+.|++...|.++ ..+|.++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~~----~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v 72 (375)
T cd08282 1 MKAVVYGGPG----NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAV 72 (375)
T ss_pred CceEEEecCC----ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCC
Confidence 6899997654 499999999985 799999999999999999999988764 2468899999999999999999
Q ss_pred CCCCCCCEEEEEc-------------------------------------cCcccceeEeecCC--ceeeCCCCCChh--
Q 020314 86 KNFKVGDKVVAVL-------------------------------------SGGGLAEFAVAKES--LTVARPQEVSAA-- 124 (327)
Q Consensus 86 ~~~~~Gd~V~~~~-------------------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~-- 124 (327)
+.+++||+|++.. .+|+|++|+.++.. .++++|++++++
T Consensus 73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~ 152 (375)
T cd08282 73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK 152 (375)
T ss_pred CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence 9999999998621 13889999999976 899999999998
Q ss_pred -hhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEE
Q 020314 125 -EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEV 201 (327)
Q Consensus 125 -~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v 201 (327)
+++.++.++.++|+++ ...++ ++|++|+|.| +|++|++++++|++.|+ +++++++ +++.++++++|++ .
T Consensus 153 ~~~a~~~~~~~ta~~a~-~~~~~-----~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~ 224 (375)
T cd08282 153 DDYLMLSDIFPTGWHGL-ELAGV-----QPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-P 224 (375)
T ss_pred hheeeecchHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-E
Confidence 5677888899999999 77777 8999999976 79999999999999998 7888764 4678888999984 5
Q ss_pred EeCCCCC--cccccCCCCCcccEEEeCCCCCc------------ccccccccCCCcEEEeecCCchh------------H
Q 020314 202 LDYKTPD--GAALKSPSGRKYDAVINCVTGIP------------WSTFEPNLGTTGKVIDFNPSPRV------------L 255 (327)
Q Consensus 202 ~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~------------~ 255 (327)
+++.+.+ ..+.+.+. +++|+++||+|++. +..++++++++|+++.+|..... .
T Consensus 225 v~~~~~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~ 303 (375)
T cd08282 225 IDFSDGDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGE 303 (375)
T ss_pred eccCcccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCcc
Confidence 5665443 22333344 57999999999764 67888999999999877643211 0
Q ss_pred HHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 256 LTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
..+....+..+...+.+ .....++.++.++++++++.+++ .+.+.|++++++++++.+.+++ .+|+|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 304 LSFDFGLLWAKGLSFGT-GQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred ccccHHHHHhcCcEEEE-ecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 11122223333443433 22335677889999999999986 4778999999999999999988 89999864
No 87
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.3e-36 Score=271.57 Aligned_cols=313 Identities=26% Similarity=0.421 Sum_probs=242.7
Q ss_pred eEEEEEeccCCCccceEEeeccCCC-CCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPT-PNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
.|+|++.+++++ ..++..+.+.|. +.+++|+||+.++++|+.|+....+.... ....|.++|+|++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~V~~vG~~v 77 (352)
T cd08247 1 YKALTFKNNTSP-LTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFH--FKVKEKGLGRDYSGVIVKVGSNV 77 (352)
T ss_pred CceEEEecCCCc-ceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccc--cccCCCccCceeEEEEEEeCccc
Confidence 378999988864 444444444443 48999999999999999999887543211 11247789999999999999999
Q ss_pred C-CCCCCCEEEEEc-----cCcccceeEeecCC----ceeeCCCCCChhhhcccCchHHHHHHHHHHhh-CCccCCCCCC
Q 020314 86 K-NFKVGDKVVAVL-----SGGGLAEFAVAKES----LTVARPQEVSAAEGAGIPCAGLTAHQALTQSL-GVKLDGSGQQ 154 (327)
Q Consensus 86 ~-~~~~Gd~V~~~~-----~~g~~a~~~~~~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~-~~~~~~~~~~ 154 (327)
+ .+++||+|+++. ..|+|++|++++.. .++++|+++++.+++.++.++.|||+++.+.. ++ ++|
T Consensus 78 ~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~-----~~g 152 (352)
T cd08247 78 ASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKL-----GPD 152 (352)
T ss_pred ccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhcc-----CCC
Confidence 8 899999999865 26899999999987 78999999999999999999999999997666 67 899
Q ss_pred CeEEEEcCCChHHHHHHHHHHhC-CC-eEEEEecCCcHHHHHhcCCCEEEeCCCCC-----cccccCCC-CCcccEEEeC
Q 020314 155 KNILITAASGAVGLYAVQLAKLG-NT-HVTATCGARNIELVKSLGADEVLDYKTPD-----GAALKSPS-GRKYDAVINC 226 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~-g~-~v~~~~~~~~~~~~~~lg~~~v~~~~~~~-----~~~~~~~~-~~~~d~v~d~ 226 (327)
++|+|+|+++++|++++++|+.. |. .++++.+.++.+.++++|++.+++.++.+ ...++... ++++|++|||
T Consensus 153 ~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~ 232 (352)
T cd08247 153 SKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDC 232 (352)
T ss_pred CeEEEECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEEC
Confidence 99999999999999999999987 45 67777666666677899999888876543 12333333 6789999999
Q ss_pred CCC-CcccccccccC---CCcEEEeecCCchh-----H----------HHHhhhhccccceeeEEEEeCCCHHHHHHHHH
Q 020314 227 VTG-IPWSTFEPNLG---TTGKVIDFNPSPRV-----L----------LTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK 287 (327)
Q Consensus 227 ~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
+|+ .....++++++ ++|+++.++..... . .........+...++.........+.++.+++
T Consensus 233 ~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (352)
T cd08247 233 VGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAE 312 (352)
T ss_pred CCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHH
Confidence 998 45778889999 99999987432110 0 01112233344444433222233467888999
Q ss_pred HHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 288 LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 288 ~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++.++.+++.+.+.+++++++++++.+++++..||+++++
T Consensus 313 ~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 313 LIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 9999999887778999999999999999999899999864
No 88
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.9e-36 Score=267.49 Aligned_cols=312 Identities=33% Similarity=0.490 Sum_probs=256.7
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.++++ .+++++++.+.|++.+++|+||+.++++|+.|+....+.... ...|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~ 76 (325)
T cd08271 1 MKAWVLPKPGA-ALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVT 76 (325)
T ss_pred CeeEEEccCCC-cceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCC
Confidence 79999998773 345999999999999999999999999999999988776531 12367899999999999999999
Q ss_pred CCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCC
Q 020314 87 NFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS 163 (327)
Q Consensus 87 ~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~ 163 (327)
++++||+|++.. ..|+|++|+.++.+.++++|+++++.+++.+.+++.++++++.+..++ +++++++|+|++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~-----~~g~~vlI~g~~ 151 (325)
T cd08271 77 GWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRI-----EAGRTILITGGA 151 (325)
T ss_pred cCCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCC-----CCCCEEEEECCc
Confidence 999999999864 478999999999999999999999999999999999999999887877 899999999988
Q ss_pred ChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314 164 GAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241 (327)
Q Consensus 164 g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~ 241 (327)
+++|++++++++..|++++.+.++++.+.+..+|.+.+++..... ..+.....++++|++++++++.....+++++++
T Consensus 152 ~~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~ 231 (325)
T cd08271 152 GGVGSFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAF 231 (325)
T ss_pred cHHHHHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhcc
Confidence 999999999999999998887765677777889998888766544 223444556789999999998777778999999
Q ss_pred CcEEEeecCCchh-HHHHhhhhccccceeeEEEEeCC-------CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHH
Q 020314 242 TGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPFSVSP-------KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAK 313 (327)
Q Consensus 242 ~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~ 313 (327)
+|+++.++..... ........+.++...+....... ..+.+..+++++.++.+.+...+.++++++.++++.
T Consensus 232 ~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~ 311 (325)
T cd08271 232 NGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRA 311 (325)
T ss_pred CCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHH
Confidence 9999998744221 11222345566666655432211 124567788999999998777788999999999999
Q ss_pred HhcCCCCccEEEeC
Q 020314 314 SISGRATGKIIVEP 327 (327)
Q Consensus 314 ~~~~~~~gkvvv~~ 327 (327)
+.++...+|+++++
T Consensus 312 ~~~~~~~~kiv~~~ 325 (325)
T cd08271 312 LKDRHTRGKIVVTI 325 (325)
T ss_pred HHcCCccceEEEEC
Confidence 99988889999874
No 89
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.8e-37 Score=272.96 Aligned_cols=298 Identities=31% Similarity=0.476 Sum_probs=238.4
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||++++..++ .+.+++++.+.|++.++||+||+.++++|++|++...+.. ...+|..+|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~ 74 (325)
T cd08264 1 MKALVFEKSG--IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVK 74 (325)
T ss_pred CeeEEeccCC--CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCC
Confidence 6899997655 3558888888888999999999999999999998876421 123577899999999999999999
Q ss_pred CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
++++||+|+... ..|+|++|.+++++.++++|+++++++++.+++++.+||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 154 (325)
T cd08264 75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA 154 (325)
T ss_pred CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence 999999998752 35899999999999999999999999999999999999999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCc
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRK 219 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~ 219 (327)
+.. .++ +++++|+|+|++|++|++++++|+++|++++++++ .+.++++|++.+++.++....+.+.+ ++
T Consensus 155 l~~-~~~-----~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~---~~~~~~~g~~~~~~~~~~~~~l~~~~--~~ 223 (325)
T cd08264 155 LKT-AGL-----GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDEVEEKVKEIT--KM 223 (325)
T ss_pred HHh-cCC-----CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH---HHHHHHhCCCeeecchHHHHHHHHHh--CC
Confidence 854 777 89999999998899999999999999999888763 36667899988887653211222223 57
Q ss_pred ccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecc
Q 020314 220 YDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVID 299 (327)
Q Consensus 220 ~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 299 (327)
+|+++|++|+..+..++++++++|+++.+|........+....+..+...+.+ .....++.++.+++++...+ ..+.
T Consensus 224 ~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~--~~~~ 300 (325)
T cd08264 224 ADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIG-STGGTRKELLELVKIAKDLK--VKVW 300 (325)
T ss_pred CCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEE-ccCCCHHHHHHHHHHHHcCC--ceeE
Confidence 99999999987789999999999999999853211122233333444445554 23345678899999996444 3455
Q ss_pred eeeccccHHHHHHHHhcCCCCccEE
Q 020314 300 SKHSLSKAEDAWAKSISGRATGKII 324 (327)
Q Consensus 300 ~~~~~~~~~~a~~~~~~~~~~gkvv 324 (327)
+.|++++++++++.+.++...||++
T Consensus 301 ~~~~~~~~~~a~~~~~~~~~~~kv~ 325 (325)
T cd08264 301 KTFKLEEAKEALKELFSKERDGRIL 325 (325)
T ss_pred EEEcHHHHHHHHHHHHcCCCccccC
Confidence 7899999999999999888777753
No 90
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=9.8e-37 Score=271.09 Aligned_cols=312 Identities=31% Similarity=0.433 Sum_probs=253.7
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++...+. +..+++++.+.|.+.+++|+||+.++++|++|++...|..+. ....|..+|||++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~ 77 (342)
T cd08266 1 MKAVVIRGHGG-PEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVT 77 (342)
T ss_pred CeEEEEecCCC-ccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCC
Confidence 68999986554 456888888888899999999999999999999998886531 124578999999999999999999
Q ss_pred CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
++++||+|++.. ..|++++|+.++.+.++++|+++++++++.++.++.++|++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~ 157 (342)
T cd08266 78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM 157 (342)
T ss_pred CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence 999999999852 25889999999999999999999999999999999999999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPS 216 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~ 216 (327)
+.+..++ .++++++|+|+++++|++++++++..|++++.++++ ++.+.+..++.+.+++....+ ..+.....
T Consensus 158 l~~~~~~-----~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (342)
T cd08266 158 LVTRARL-----RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTG 232 (342)
T ss_pred HHHhcCC-----CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhC
Confidence 8777777 889999999999999999999999999999888754 567777778887777655433 22333344
Q ss_pred CCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE
Q 020314 217 GRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT 296 (327)
Q Consensus 217 ~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 296 (327)
++++|+++|++|+..+..++++++++|+++.++................++..+.+ ........+..++++++++.+.+
T Consensus 233 ~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~ 311 (342)
T cd08266 233 KRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILG-STMGTKAELDEALRLVFRGKLKP 311 (342)
T ss_pred CCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEE-EecCCHHHHHHHHHHHHcCCccc
Confidence 56799999999988788899999999999999855432111222122334444544 22345668889999999999988
Q ss_pred ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 297 VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 297 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.+.+.|++++++++++.+.++...+|+++++
T Consensus 312 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 312 VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 7778999999999999999888889999875
No 91
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.1e-36 Score=270.31 Aligned_cols=314 Identities=30% Similarity=0.389 Sum_probs=247.4
Q ss_pred eEEEEEeccCCCc--cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314 7 MHAVQYDSYGGGV--AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84 (327)
Q Consensus 7 ~~a~~~~~~g~~~--~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (327)
|||+++.+++++. ..+++++.+.|++.+++|+||+.++++|+.|++...+..+ ...+|.++|||++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~ 77 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSE 77 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCC
Confidence 6899999988632 2477778888888999999999999999999998877653 1245678999999999999999
Q ss_pred CCCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314 85 VKNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA 161 (327)
Q Consensus 85 ~~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g 161 (327)
+..+++||+|++.. ..|+|++|+.++...++++|+++++++++.+++.+.++|+++.+..++.....+++++|+|+|
T Consensus 78 v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g 157 (336)
T cd08252 78 VTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIG 157 (336)
T ss_pred CCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEc
Confidence 99999999999853 358999999999999999999999999999999999999998777777211112399999999
Q ss_pred CCChHHHHHHHHHHhCC-CeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Ccccccccc
Q 020314 162 ASGAVGLYAVQLAKLGN-THVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IPWSTFEPN 238 (327)
Q Consensus 162 ~~g~~G~~~~~la~~~g-~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~ 238 (327)
++|++|++++++|+.+| ++++++++ +++.++++++|++.++++.......+....++++|+++|++|+ ..+..++++
T Consensus 158 ~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~ 237 (336)
T cd08252 158 GAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAEL 237 (336)
T ss_pred CCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHH
Confidence 99999999999999999 89999985 4788888999999888876422222223344689999999995 568899999
Q ss_pred cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-------C----CCHHHHHHHHHHHHCCceeEecc---eeecc
Q 020314 239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-------S----PKGENLDFLVKLVKEGKLKTVID---SKHSL 304 (327)
Q Consensus 239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~g~l~~~~~---~~~~~ 304 (327)
++++|+++.+|.... .+....+..++..+.+... . ...+.++.+++++.++.+.+... ..+++
T Consensus 238 l~~~g~~v~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (336)
T cd08252 238 IAPQGHICLIVDPQE---PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA 314 (336)
T ss_pred hcCCCEEEEecCCCC---cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH
Confidence 999999999985421 1111122223333332111 0 11356788999999999986533 34799
Q ss_pred ccHHHHHHHHhcCCCCccEEEe
Q 020314 305 SKAEDAWAKSISGRATGKIIVE 326 (327)
Q Consensus 305 ~~~~~a~~~~~~~~~~gkvvv~ 326 (327)
++++++++.+.+++..||++++
T Consensus 315 ~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 315 ENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHHHHHHcCCccceEEeC
Confidence 9999999999999999999874
No 92
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.3e-36 Score=269.20 Aligned_cols=298 Identities=27% Similarity=0.371 Sum_probs=243.9
Q ss_pred eEEEEEeccCCC-ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGG-VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~-~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
||+|++.+.+++ ++.+++++.+.|.+.++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v 77 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGV 77 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCC
Confidence 789999887742 235888888888899999999999999999999998887642 2568899999999999999999
Q ss_pred CCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHH
Q 020314 86 KNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH 137 (327)
Q Consensus 86 ~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~ 137 (327)
+++++||+|++.. .+|+|++|+.++...++++|+++++.+++.+++++.+||
T Consensus 78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~ 157 (329)
T cd08298 78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY 157 (329)
T ss_pred CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence 9999999997621 258999999999999999999999999999999999999
Q ss_pred HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCC
Q 020314 138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPS 216 (327)
Q Consensus 138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~ 216 (327)
+++ ..+++ +++++++|+| +|++|+++++++++.|++++++++ +++++.++++|++.+++.+.. .
T Consensus 158 ~~~-~~~~~-----~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~ 222 (329)
T cd08298 158 RAL-KLAGL-----KPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL--------P 222 (329)
T ss_pred HHH-HhhCC-----CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc--------C
Confidence 999 88888 8999999997 799999999999999999998885 467888899999887766432 2
Q ss_pred CCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314 217 GRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295 (327)
Q Consensus 217 ~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 295 (327)
++++|+++++.+. ..+..++++++++|+++.+|........+.... .++...+.+ +.....+.++.++++++++.++
T Consensus 223 ~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~-~~~~~~~~~~~~~~l~~~~~l~ 300 (329)
T cd08298 223 PEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRS-VANLTRQDGEEFLKLAAEIPIK 300 (329)
T ss_pred CCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEE-ecCCCHHHHHHHHHHHHcCCCC
Confidence 3579999998764 458899999999999998874322111111111 234444444 2234567889999999999987
Q ss_pred EecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 296 TVIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 296 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
+. .+.|+++++++|++.+++++..||+|+
T Consensus 301 ~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 301 PE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred ce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 64 578999999999999999999999874
No 93
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-36 Score=269.06 Aligned_cols=309 Identities=30% Similarity=0.408 Sum_probs=248.2
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
.|||.+.+.+. +..+++++.+.|.+.++||+|++.++++|+.|+.+..|..+.. ..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~ 77 (331)
T cd08273 1 NREVVVTRRGG-PEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVT 77 (331)
T ss_pred CeeEEEccCCC-cccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCc
Confidence 48999998775 5679999999999999999999999999999999988875321 24678999999999999999999
Q ss_pred CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314 87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV 166 (327)
Q Consensus 87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~ 166 (327)
.+++||+|+++...|+|++|..++.+.++++|+++++++++.++.++.++|+++.+..++ .++++|+|+|++|++
T Consensus 78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~-----~~g~~vlI~g~~g~i 152 (331)
T cd08273 78 GFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKV-----LTGQRVLIHGASGGV 152 (331)
T ss_pred cCCCCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-----CCCCEEEEECCCcHH
Confidence 999999999976569999999999999999999999999999999999999999777777 899999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEE
Q 020314 167 GLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI 246 (327)
Q Consensus 167 G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v 246 (327)
|++++++|+..|++|++++++++.+.++++|+.. ++....+.... ...++++|+++||+++.....++++++++|+++
T Consensus 153 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~-~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v 230 (331)
T cd08273 153 GQALLELALLAGAEVYGTASERNHAALRELGATP-IDYRTKDWLPA-MLTPGGVDVVFDGVGGESYEESYAALAPGGTLV 230 (331)
T ss_pred HHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCeE-EcCCCcchhhh-hccCCCceEEEECCchHHHHHHHHHhcCCCEEE
Confidence 9999999999999999888755677788898654 44433331111 233357999999999888889999999999999
Q ss_pred eecCCchhHH---HH----------hhhhccccceeeEEEEeC--------CCHHHHHHHHHHHHCCceeEecceeeccc
Q 020314 247 DFNPSPRVLL---TF----------AWKKLTFSKKQLVPFSVS--------PKGENLDFLVKLVKEGKLKTVIDSKHSLS 305 (327)
Q Consensus 247 ~~g~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 305 (327)
.+|....... .+ .................. ...+.++.++++++++.+++.+.+.++++
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 310 (331)
T cd08273 231 CYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLS 310 (331)
T ss_pred EEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHH
Confidence 9985432211 00 000011111122221111 12367888999999999988777899999
Q ss_pred cHHHHHHHHhcCCCCccEEE
Q 020314 306 KAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 306 ~~~~a~~~~~~~~~~gkvvv 325 (327)
+++++++.+.+++..||+|+
T Consensus 311 ~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 311 EVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHcCCCcceEEe
Confidence 99999999999988899886
No 94
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=7.9e-37 Score=271.74 Aligned_cols=307 Identities=29% Similarity=0.329 Sum_probs=241.7
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||+|++...+. .+++.+.+.|.+.++|++||+.++++|+.|++++.+..........|..+|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~ 77 (341)
T cd05281 1 MKAIVKTKAGP---GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT 77 (341)
T ss_pred CcceEEecCCC---ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence 68999987764 388999999999999999999999999999987654321111123567899999999999999999
Q ss_pred CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
.+++||+|++++ ..|+|++|++++.+.++++|++++++ +++++.++.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~~ 156 (341)
T cd05281 78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVHT 156 (341)
T ss_pred CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHHH
Confidence 999999998841 35899999999999999999999985 44666777888888
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCCCc-ccccCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTPDG-AALKSPS 216 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~ 216 (327)
+. ... +++++|||.| +|++|++++++|+.+|+ +++++++ +++.+.++++|++.+++++..+. .+.+...
T Consensus 157 ~~--~~~-----~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 228 (341)
T cd05281 157 VL--AGD-----VSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTD 228 (341)
T ss_pred HH--hcC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcC
Confidence 74 333 6899999987 69999999999999999 6888764 46778888999988887655432 3334456
Q ss_pred CCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHh-hhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314 217 GRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFA-WKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL 294 (327)
Q Consensus 217 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 294 (327)
++++|++|||+|+. .+..++++|+++|+++.+|..... .... ...+.+++..+.+.......+.++.+++++.++.+
T Consensus 229 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 307 (341)
T cd05281 229 GTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP-VDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKV 307 (341)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-cccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCC
Confidence 67899999999865 478889999999999998854321 1111 12355566666664433345677889999999997
Q ss_pred e--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 295 K--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 295 ~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
. +.+...+++++++++++.+.+++ .||+|++|
T Consensus 308 ~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 308 DLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred ChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 5 45567899999999999999999 99999875
No 95
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=9.7e-37 Score=268.82 Aligned_cols=287 Identities=21% Similarity=0.276 Sum_probs=232.0
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.+++ .+++++.+.|++.++||+||+.++++|+.|++...|.++ .|.++|||++|+|+++|++
T Consensus 1 ~~a~~~~~~~----~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~------~~~~~G~e~~G~Vv~~G~~-- 68 (319)
T cd08242 1 MKALVLDGGL----DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP------FPGVPGHEFVGIVEEGPEA-- 68 (319)
T ss_pred CeeEEEeCCC----cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC------CCCccCceEEEEEEEeCCC--
Confidence 6899998754 399999999999999999999999999999999888752 5678999999999999987
Q ss_pred CCCCCCEEEEE----------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314 87 NFKVGDKVVAV----------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138 (327)
Q Consensus 87 ~~~~Gd~V~~~----------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 138 (327)
+++||||... ..+|+|++|++++.+.++++|++++.++++.+ .+..++|.
T Consensus 69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~ 146 (319)
T cd08242 69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE 146 (319)
T ss_pred -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence 6799999631 12689999999999999999999999888864 44456665
Q ss_pred HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCC
Q 020314 139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSG 217 (327)
Q Consensus 139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~ 217 (327)
++ +..++ +++++|||+| +|.+|++++|+|+.+|++++++++ +++.+.++++|++.++++... +.+
T Consensus 147 ~~-~~~~~-----~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~ 212 (319)
T cd08242 147 IL-EQVPI-----TPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE-------SEG 212 (319)
T ss_pred HH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc-------ccC
Confidence 55 66777 8999999997 799999999999999999888874 578888888999887766432 345
Q ss_pred CcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce--
Q 020314 218 RKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL-- 294 (327)
Q Consensus 218 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l-- 294 (327)
+++|+++||+|+. .+..++++++++|+++..+..... ..+....+.+++..+.+... ..+++++++++++++
T Consensus 213 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~l~~ 287 (319)
T cd08242 213 GGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGP-ASFDLTKAVVNEITLVGSRC----GPFAPALRLLRKGLVDV 287 (319)
T ss_pred CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-CccCHHHheecceEEEEEec----ccHHHHHHHHHcCCCCh
Confidence 6799999999874 488889999999999986643221 22233344556666655321 127889999999998
Q ss_pred eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 295 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
.+.+.+.|++++++++|+.+.++. .+|+|+++
T Consensus 288 ~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 288 DPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred hhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 456778999999999999999776 48999875
No 96
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.2e-36 Score=268.18 Aligned_cols=311 Identities=30% Similarity=0.433 Sum_probs=250.4
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||++++.+.+. ++.+++++.+.|.+.+++|+||+.++++|+.|++...|.++. +..+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~ 77 (323)
T cd05276 1 MKAIVIKEPGG-PEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVT 77 (323)
T ss_pred CeEEEEecCCC-cccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCC
Confidence 79999988765 566888888888889999999999999999999988776531 224678999999999999999999
Q ss_pred CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314 87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV 166 (327)
Q Consensus 87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~ 166 (327)
.+++||+|+++..+|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+...+ .++++|+|+|++|++
T Consensus 78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~-----~~~~~vlv~g~~~~i 152 (323)
T cd05276 78 GWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGL-----KAGETVLIHGGASGV 152 (323)
T ss_pred CCCCCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCC-----CCCCEEEEEcCcChH
Confidence 999999999976679999999999999999999999999999999999999998777777 789999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCc
Q 020314 167 GLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243 (327)
Q Consensus 167 G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G 243 (327)
|++++++++..|+++++++++ ++.+.++.+|.+.+++....+ ..+.....++++|+++|+.|+..+..++++++++|
T Consensus 153 g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g 232 (323)
T cd05276 153 GTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDG 232 (323)
T ss_pred HHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCC
Confidence 999999999999999888855 677777889988887766543 22333344568999999999877888899999999
Q ss_pred EEEeecCCchhHHHHhhhhccccceeeEEEEeCC---------CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314 244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP---------KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS 314 (327)
Q Consensus 244 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~ 314 (327)
+++.++.............+..++..+.+..... ..+.++++++++.++.+.+.....|++++++++++.+
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 312 (323)
T cd05276 233 RLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRM 312 (323)
T ss_pred EEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHH
Confidence 9999875322111111111222344444432211 1234677888999999887777889999999999999
Q ss_pred hcCCCCccEEE
Q 020314 315 ISGRATGKIIV 325 (327)
Q Consensus 315 ~~~~~~gkvvv 325 (327)
.++...||+++
T Consensus 313 ~~~~~~~kvv~ 323 (323)
T cd05276 313 ESNEHIGKIVL 323 (323)
T ss_pred HhCCCcceEeC
Confidence 98888888874
No 97
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.4e-36 Score=266.80 Aligned_cols=309 Identities=31% Similarity=0.491 Sum_probs=251.6
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.+.+. ++.+++++.+.|.+.+++|+|++.++++|+.|++...+.... ...+|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~ 77 (326)
T cd08272 1 MKALVLESFGG-PEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAA--RPPLPAILGCDVAGVVEAVGEGVT 77 (326)
T ss_pred CeEEEEccCCC-chheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccccceeEEEEEeCCCCC
Confidence 69999988876 456888888888899999999999999999999988776531 123578899999999999999999
Q ss_pred CCCCCCEEEEEc-----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314 87 NFKVGDKVVAVL-----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA 161 (327)
Q Consensus 87 ~~~~Gd~V~~~~-----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g 161 (327)
++++||+|+++. ..|+|++|+.++...++++|+++++.+++.++..+.+||+++.+..++ +++++++|+|
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-----~~~~~vli~g 152 (326)
T cd08272 78 RFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV-----QAGQTVLIHG 152 (326)
T ss_pred CCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCC-----CCCCEEEEEc
Confidence 999999999864 368999999999999999999999999999999999999998888888 8999999999
Q ss_pred CCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCCCcccccccccC
Q 020314 162 ASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLG 240 (327)
Q Consensus 162 ~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~ 240 (327)
+++++|++++++++..|+++++++++++.+.++.+|.+.+++..... ..+...+.++++|+++|++++.....++++++
T Consensus 153 ~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~ 232 (326)
T cd08272 153 GAGGVGHVAVQLAKAAGARVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVA 232 (326)
T ss_pred CCCcHHHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhc
Confidence 99999999999999999999988855777788889998887765432 12334455678999999999877888999999
Q ss_pred CCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC----------CCHHHHHHHHHHHHCCceeEecc-eeeccccHHH
Q 020314 241 TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS----------PKGENLDFLVKLVKEGKLKTVID-SKHSLSKAED 309 (327)
Q Consensus 241 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~l~~~~~-~~~~~~~~~~ 309 (327)
++|+++.++..... .. .....++..+.+.... ...+.+..+++++.++.+++.+. +.|+++++++
T Consensus 233 ~~g~~v~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 308 (326)
T cd08272 233 LYGRVVSILGGATH--DL--APLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAA 308 (326)
T ss_pred cCCEEEEEecCCcc--ch--hhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHH
Confidence 99999998755311 11 1111233333332211 12456788999999999987655 8999999999
Q ss_pred HHHHHhcCCCCccEEEeC
Q 020314 310 AWAKSISGRATGKIIVEP 327 (327)
Q Consensus 310 a~~~~~~~~~~gkvvv~~ 327 (327)
+++.+.+++..||+++++
T Consensus 309 ~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 309 AHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHHHcCCcccEEEEEC
Confidence 999999888889999874
No 98
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=9.5e-37 Score=271.45 Aligned_cols=301 Identities=24% Similarity=0.333 Sum_probs=239.4
Q ss_pred EEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcC-CCCCCCCCCCeeecccceEEEEecCCCCCCC
Q 020314 10 VQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGM-LRPFLPRKFPFIPASDVAGEVIGLGSEVKNF 88 (327)
Q Consensus 10 ~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~-~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 88 (327)
.++.++. .+++++.+.|.+.++||+||+.++++|+.|++...+. ..... ..+|.++|+|++|+|+++|++++++
T Consensus 2 ~~~~~~~----~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~ 76 (343)
T cd05285 2 AVLHGPG----DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFV-VKEPMVLGHESAGTVVAVGSGVTHL 76 (343)
T ss_pred ceEecCC----ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccC-CCCCcccCcceeEEEEeeCCCCCCC
Confidence 4566553 3899999999999999999999999999999876432 21111 1356789999999999999999999
Q ss_pred CCCCEEEEE------------------------c----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHH
Q 020314 89 KVGDKVVAV------------------------L----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL 140 (327)
Q Consensus 89 ~~Gd~V~~~------------------------~----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al 140 (327)
++||+|++. . ..|+|++|++++++.++++|+++++++++.+ .++.+|++++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~ 155 (343)
T cd05285 77 KVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC 155 (343)
T ss_pred CCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH
Confidence 999999861 1 2589999999999999999999999999876 5778999997
Q ss_pred HHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCc-----cccc
Q 020314 141 TQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDG-----AALK 213 (327)
Q Consensus 141 ~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-----~~~~ 213 (327)
...++ +++++|||.| +|++|++++++|+++|++ |+++++ +++.++++++|++.+++++..+. .+..
T Consensus 156 -~~~~~-----~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~ 228 (343)
T cd05285 156 -RRAGV-----RPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAE 228 (343)
T ss_pred -HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHH
Confidence 77777 8999999987 699999999999999997 777765 46778888899999988765442 2344
Q ss_pred CCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314 214 SPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG 292 (327)
Q Consensus 214 ~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 292 (327)
.+.++++|++|||+|+. .+..++++++++|+++.+|..... ..+......++...+.+... ..+.++.++++++++
T Consensus 229 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~ 305 (343)
T cd05285 229 LLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFR--YANTYPTAIELLASG 305 (343)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEecc--ChHHHHHHHHHHHcC
Confidence 56667899999999976 588899999999999999854322 22222345556666665332 236788899999999
Q ss_pred cee--EecceeeccccHHHHHHHHhcCC-CCccEEEe
Q 020314 293 KLK--TVIDSKHSLSKAEDAWAKSISGR-ATGKIIVE 326 (327)
Q Consensus 293 ~l~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~ 326 (327)
.+. +.+.+.|+++++.++++.+.++. ..+|++++
T Consensus 306 ~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 306 KVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred CCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence 865 34567899999999999999885 45899874
No 99
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.1e-36 Score=271.09 Aligned_cols=303 Identities=23% Similarity=0.311 Sum_probs=242.9
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||||++++++. +.+++.+.|++.++||+||+.++++|+.|++...+.++ ...|.++|+|++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~----l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~----~~~~~~~g~~~~G~V~~~g~~v~ 72 (343)
T cd08236 1 MKALVLTGPGD----LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA----YHPPLVLGHEFSGTVEEVGSGVD 72 (343)
T ss_pred CeeEEEecCCc----eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC----CCCCcccCcceEEEEEEECCCCC
Confidence 79999988754 88999999999999999999999999999998887652 24568899999999999999999
Q ss_pred CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
.+++||+|+++. ..|+|++|..++++.++++|+++++++++.+ .++.+||++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~ 151 (343)
T cd08236 73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA 151 (343)
T ss_pred cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence 999999999852 3689999999999999999999999999887 677899999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcCCCEEEeCCCCC-cccccCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLGADEVLDYKTPD-GAALKSPS 216 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~ 216 (327)
+. ..++ +++++|+|+| +|.+|.+++++|+.+|++ +++++++ ++.++++++|.+.++++++.. ..+.....
T Consensus 152 l~-~~~~-----~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 224 (343)
T cd08236 152 VR-LAGI-----TLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTE 224 (343)
T ss_pred HH-hcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhC
Confidence 94 6676 8899999997 699999999999999997 8888754 667777889998888876543 22334455
Q ss_pred CCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhH--HHHhhhhccccceeeEEEEeC----CCHHHHHHHHHHH
Q 020314 217 GRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVL--LTFAWKKLTFSKKQLVPFSVS----PKGENLDFLVKLV 289 (327)
Q Consensus 217 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 289 (327)
++++|+++||+|+. .+..++++|+++|+++.+|...... .......+..++..+.+.... ...+.++.+++++
T Consensus 225 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (343)
T cd08236 225 GRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLL 304 (343)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHH
Confidence 66799999999864 4788999999999999998543210 111112223444555443221 1256788899999
Q ss_pred HCCcee--EecceeeccccHHHHHHHHhc-CCCCccEEE
Q 020314 290 KEGKLK--TVIDSKHSLSKAEDAWAKSIS-GRATGKIIV 325 (327)
Q Consensus 290 ~~g~l~--~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv 325 (327)
+++.+. +.+...+++++++++++.+.+ +...||+|+
T Consensus 305 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 305 ASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 999875 445678999999999999998 556788874
No 100
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-36 Score=271.15 Aligned_cols=303 Identities=24% Similarity=0.301 Sum_probs=240.0
Q ss_pred eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
||+|++.++++ +++++.+.|.| .++||+||+.++++|++|++...|.++ ...|.++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~~~----~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v 72 (345)
T cd08287 1 MRATVIHGPGD----IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEV 72 (345)
T ss_pred CceeEEecCCc----eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCC
Confidence 78999986554 89999999985 899999999999999999998888753 2457899999999999999999
Q ss_pred CCCCCCCEEEEEc---------------------------cCcccceeEeecCC--ceeeCCCCCChhhhc-----ccCc
Q 020314 86 KNFKVGDKVVAVL---------------------------SGGGLAEFAVAKES--LTVARPQEVSAAEGA-----GIPC 131 (327)
Q Consensus 86 ~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa-----~~~~ 131 (327)
..+++||+|++.. .+|+|++|..++.+ .++++|++++++.+. ++..
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~ 152 (345)
T cd08287 73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD 152 (345)
T ss_pred CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence 9999999998721 13889999999975 999999999873221 2235
Q ss_pred hHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcCCCEEEeCCCCC-
Q 020314 132 AGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLGADEVLDYKTPD- 208 (327)
Q Consensus 132 ~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg~~~v~~~~~~~- 208 (327)
.+.+||+++ ...++ +++++|+|.| +|++|++++++|++.|++ ++++++. ++.+.++++|++.++++...+
T Consensus 153 ~~~~a~~~~-~~~~~-----~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~ 225 (345)
T cd08287 153 VMGTGHHAA-VSAGV-----RPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEA 225 (345)
T ss_pred HHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccH
Confidence 678999998 46677 8899999976 899999999999999995 6666654 577888999999999887654
Q ss_pred -cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314 209 -GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV 286 (327)
Q Consensus 209 -~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
..+.+.+.+.++|+++|++|+. .+..++++++++|+++.+|..... ..+.......++..+.+ ......+.+++++
T Consensus 226 ~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 303 (345)
T cd08287 226 VARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG-VELDVRELFFRNVGLAG-GPAPVRRYLPELL 303 (345)
T ss_pred HHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC-CccCHHHHHhcceEEEE-ecCCcHHHHHHHH
Confidence 2344455667899999999864 488999999999999998855421 12222122345555554 3334567899999
Q ss_pred HHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 287 KLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 287 ~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+++.++.+++ .+.+.+++++++++++.+.++... |+++++
T Consensus 304 ~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~~ 345 (345)
T cd08287 304 DDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLRP 345 (345)
T ss_pred HHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeCC
Confidence 9999999875 356789999999999999877665 998864
No 101
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=1.2e-36 Score=269.41 Aligned_cols=309 Identities=26% Similarity=0.274 Sum_probs=242.9
Q ss_pred ceEEEEEeccCC---CccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314 6 VMHAVQYDSYGG---GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG 82 (327)
Q Consensus 6 ~~~a~~~~~~g~---~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 82 (327)
+.|+|++.++++ +++.+++++.+.|++.+++|+||+.++++|+.|.....+......+...+.++|+|++|+|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G 80 (329)
T cd05288 1 SNRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESR 80 (329)
T ss_pred CCcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecC
Confidence 468999998875 57889999999999999999999999999998876665542111122235678999999999999
Q ss_pred CCCCCCCCCCEEEEEccCcccceeEeecC-CceeeCCCCCC--hhhhcc-cCchHHHHHHHHHHhhCCccCCCCCCCeEE
Q 020314 83 SEVKNFKVGDKVVAVLSGGGLAEFAVAKE-SLTVARPQEVS--AAEGAG-IPCAGLTAHQALTQSLGVKLDGSGQQKNIL 158 (327)
Q Consensus 83 ~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~al~~~~~~~~~~~~~~~~vl 158 (327)
++ ++++||||+++ ++|++|+.++. +.++++|++++ +.+++. +++++.++|+++.+..++ .++++||
T Consensus 81 ~~--~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~-----~~~~~vl 150 (329)
T cd05288 81 SP--DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKP-----KPGETVV 150 (329)
T ss_pred CC--CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCC-----CCCCEEE
Confidence 64 79999999985 58999999999 99999999985 445555 888999999999777777 7899999
Q ss_pred EEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHh-cCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccc
Q 020314 159 ITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKS-LGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWST 234 (327)
Q Consensus 159 V~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~-lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~ 234 (327)
|+|++|++|++++++|+..|++++++++. ++.+.+++ +|++.++++.+.+. .+.... ++++|++|||+|+..+..
T Consensus 151 I~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~-~~~~d~vi~~~g~~~~~~ 229 (329)
T cd05288 151 VSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAA-PDGIDVYFDNVGGEILDA 229 (329)
T ss_pred EecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhc-cCCceEEEEcchHHHHHH
Confidence 99999999999999999999999988854 67778877 99998888766442 233333 367999999999877889
Q ss_pred cccccCCCcEEEeecCCchhHHH-----HhhhhccccceeeEEEEeCCC----HHHHHHHHHHHHCCceeEecceeeccc
Q 020314 235 FEPNLGTTGKVIDFNPSPRVLLT-----FAWKKLTFSKKQLVPFSVSPK----GENLDFLVKLVKEGKLKTVIDSKHSLS 305 (327)
Q Consensus 235 ~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~ 305 (327)
++++++++|+++.+|........ ........++..+.+...... .+.+.++++++.++.+++.....++++
T Consensus 230 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~ 309 (329)
T cd05288 230 ALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLE 309 (329)
T ss_pred HHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHH
Confidence 99999999999999854321110 112222344555554332222 356788899999999987656679999
Q ss_pred cHHHHHHHHhcCCCCccEEE
Q 020314 306 KAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 306 ~~~~a~~~~~~~~~~gkvvv 325 (327)
+++++++.+.+++..||+++
T Consensus 310 ~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 310 NAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHHhcCCCccceeC
Confidence 99999999998888888874
No 102
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=3e-36 Score=266.31 Aligned_cols=310 Identities=22% Similarity=0.281 Sum_probs=243.4
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.++|+ ++.+++++.+.|++.++||+||+.++++|+.|.+...|.++. ...+|..+|||++|+|++ ++++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~ 75 (324)
T cd08288 1 FKALVLEKDDG-GTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI--VRTFPLVPGIDLAGTVVE--SSSP 75 (324)
T ss_pred CeeEEEeccCC-CcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc--cCCCCCccccceEEEEEe--CCCC
Confidence 79999998886 467999999999999999999999999999999988876531 113577899999999998 7778
Q ss_pred CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHh--hCCccCCCCCCCeEE
Q 020314 87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQS--LGVKLDGSGQQKNIL 158 (327)
Q Consensus 87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~--~~~~~~~~~~~~~vl 158 (327)
++++||+|+++. ..|+|++|.+++.+.++++|+++++++++.++.+++++++++... .+.. +++++|+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~----~~~~~vl 151 (324)
T cd08288 76 RFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVT----PGDGPVL 151 (324)
T ss_pred CCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcC----CCCCEEE
Confidence 899999999853 368999999999999999999999999999999999998876422 2331 3678999
Q ss_pred EEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccccccc
Q 020314 159 ITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237 (327)
Q Consensus 159 V~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~ 237 (327)
|+|++|++|++++++|+++|+++++++ ++++.+.++++|++.++++++....... ....++|.++|+++++.+...+.
T Consensus 152 I~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~ 230 (324)
T cd08288 152 VTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRP-LQKERWAGAVDTVGGHTLANVLA 230 (324)
T ss_pred EECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhh-hccCcccEEEECCcHHHHHHHHH
Confidence 999999999999999999999999887 4578888899999999887654332222 22335899999999866777888
Q ss_pred ccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-----CCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHH
Q 020314 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-----SPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWA 312 (327)
Q Consensus 238 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~ 312 (327)
.++.+|+++.+|.............+..++..+.+... ....+.++.+.+++..+.+.+ +.+.+++++++++++
T Consensus 231 ~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~ 309 (324)
T cd08288 231 QTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LTREIPLADVPDAAE 309 (324)
T ss_pred HhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cceeecHHHHHHHHH
Confidence 88999999998854211111111222234444444321 112456777888888888875 467999999999999
Q ss_pred HHhcCCCCccEEEeC
Q 020314 313 KSISGRATGKIIVEP 327 (327)
Q Consensus 313 ~~~~~~~~gkvvv~~ 327 (327)
.+.+++..||+++++
T Consensus 310 ~~~~~~~~~~vvv~~ 324 (324)
T cd08288 310 AILAGQVRGRVVVDV 324 (324)
T ss_pred HHhcCCccCeEEEeC
Confidence 999999999999874
No 103
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.9e-36 Score=263.68 Aligned_cols=308 Identities=45% Similarity=0.676 Sum_probs=243.4
Q ss_pred EEeccCCCccce--EEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCC
Q 020314 11 QYDSYGGGVAGL--KHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNF 88 (327)
Q Consensus 11 ~~~~~g~~~~~l--~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 88 (327)
+++.+++ ++++ ++++.+.|++.++||+|++.++++|+.|.+...|.++...+...|..+|||++|+|+++|+++.++
T Consensus 2 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~ 80 (319)
T cd08267 2 VYTRYGS-PEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRF 80 (319)
T ss_pred eeCCCCC-hhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCC
Confidence 3455665 3444 788889999999999999999999999999988765321122456789999999999999999999
Q ss_pred CCCCEEEEEcc---CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314 89 KVGDKVVAVLS---GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA 165 (327)
Q Consensus 89 ~~Gd~V~~~~~---~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~ 165 (327)
++||+|++... .|+|++|..++.+.++++|+++++++++.+++++.+||+++.+..++ +++++|+|+|++|+
T Consensus 81 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~g~~vli~g~~g~ 155 (319)
T cd08267 81 KVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKV-----KPGQRVLINGASGG 155 (319)
T ss_pred CCCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-----CCCCEEEEEcCCcH
Confidence 99999998753 58999999999999999999999999999999999999999777767 89999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc--ccccccccCCCc
Q 020314 166 VGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP--WSTFEPNLGTTG 243 (327)
Q Consensus 166 ~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G 243 (327)
+|++++++|+..|+++++++++++.+.++.+|.+.+++....+.. .....++++|+++||+++.. .......++++|
T Consensus 156 ~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g 234 (319)
T cd08267 156 VGTFAVQIAKALGAHVTGVCSTRNAELVRSLGADEVIDYTTEDFV-ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGG 234 (319)
T ss_pred HHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCEeecCCCCCcc-hhccCCCCCcEEEECCCchHHHHHHhhhccCCCC
Confidence 999999999999999998886677788889999888876554432 34455678999999998532 333444599999
Q ss_pred EEEeecCCchhHHHHh---hhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCC
Q 020314 244 KVIDFNPSPRVLLTFA---WKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRAT 320 (327)
Q Consensus 244 ~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~ 320 (327)
+++.+|.......... ..........+.........+.+.+++++++++.+++.+.+.|++++++++++.+.+++..
T Consensus 235 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~ 314 (319)
T cd08267 235 RYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRAR 314 (319)
T ss_pred EEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCC
Confidence 9999985532211110 0111122222222222334788999999999999988888899999999999999998888
Q ss_pred ccEEE
Q 020314 321 GKIIV 325 (327)
Q Consensus 321 gkvvv 325 (327)
+|+++
T Consensus 315 ~~vvv 319 (319)
T cd08267 315 GKVVI 319 (319)
T ss_pred CcEeC
Confidence 88874
No 104
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=8.5e-36 Score=261.29 Aligned_cols=306 Identities=37% Similarity=0.574 Sum_probs=249.4
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||++++...+. .+.+.+++.+.|.+.++||+||+.++++|+.|++...|..........|..+|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~ 79 (309)
T cd05289 1 MKAVRIHEYGG-PEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT 79 (309)
T ss_pred CceEEEcccCC-ccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence 78999987765 45567777777789999999999999999999998877652111234578999999999999999999
Q ss_pred CCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCC
Q 020314 87 NFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS 163 (327)
Q Consensus 87 ~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~ 163 (327)
++++||+|+++. ..|++++|+.++...++++|+++++..++.+++.+.++|+++.+...+ .++++++|+|++
T Consensus 80 ~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vlv~g~~ 154 (309)
T cd05289 80 GFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGL-----KAGQTVLIHGAA 154 (309)
T ss_pred CCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCC-----CCCCEEEEecCC
Confidence 999999999864 268999999999999999999999999999999999999999777667 789999999988
Q ss_pred ChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCc
Q 020314 164 GAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243 (327)
Q Consensus 164 g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G 243 (327)
|.+|++++++++..|+++++++++++.+.++.+|.+.+++....+... ...++++|+++|++++.....++++++++|
T Consensus 155 g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g 232 (309)
T cd05289 155 GGVGSFAVQLAKARGARVIATASAANADFLRSLGADEVIDYTKGDFER--AAAPGGVDAVLDTVGGETLARSLALVKPGG 232 (309)
T ss_pred chHHHHHHHHHHHcCCEEEEEecchhHHHHHHcCCCEEEeCCCCchhh--ccCCCCceEEEECCchHHHHHHHHHHhcCc
Confidence 999999999999999999988855577777889988887765543221 345567999999999888889999999999
Q ss_pred EEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccE
Q 020314 244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKI 323 (327)
Q Consensus 244 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 323 (327)
+++.+|....... ....+......+...+..+.++.++++++++.+.+.+.+.|++++++++++.+.+++..+|+
T Consensus 233 ~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kv 307 (309)
T cd05289 233 RLVSIAGPPPAEQ-----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKV 307 (309)
T ss_pred EEEEEcCCCcchh-----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcE
Confidence 9999986543211 11122222322222222678899999999999988888899999999999999998888888
Q ss_pred EE
Q 020314 324 IV 325 (327)
Q Consensus 324 vv 325 (327)
++
T Consensus 308 v~ 309 (309)
T cd05289 308 VL 309 (309)
T ss_pred eC
Confidence 74
No 105
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.8e-36 Score=267.60 Aligned_cols=300 Identities=27% Similarity=0.379 Sum_probs=241.6
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
|||+++.++++ +++++.+.|++.++||+||++++++|+.|++...|.++ ..+|.++|+|++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~ 72 (334)
T cd08234 1 MKALVYEGPGE----LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVT 72 (334)
T ss_pred CeeEEecCCCc----eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCC
Confidence 78999987664 89999999999999999999999999999999988764 24778999999999999999999
Q ss_pred CCCCCCEEEEE------------------------c---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 87 NFKVGDKVVAV------------------------L---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 87 ~~~~Gd~V~~~------------------------~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
++++||+|++. . ..|+|++|+.++.+.++++|+++++.+++.+ ..+.+++++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 151 (334)
T cd08234 73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG 151 (334)
T ss_pred CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence 99999999871 1 3689999999999999999999999998766 777899999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSG 217 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~ 217 (327)
+ ...++ +++++|+|+| +|.+|.+++++|+..|++ ++++++ +++.+.++++|.+.++++...+....+.+.+
T Consensus 152 l-~~~~~-----~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 224 (334)
T cd08234 152 L-DLLGI-----KPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNP 224 (334)
T ss_pred H-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcC
Confidence 8 77777 8999999997 699999999999999997 777764 4677778889988888776554211134456
Q ss_pred CcccEEEeCCCCC-cccccccccCCCcEEEeecCCch-hHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314 218 RKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR-VLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295 (327)
Q Consensus 218 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 295 (327)
+++|++|||++.. .+..++++++++|+++.+|.... ....+....+..++..+.+. ......++.++++++++++.
T Consensus 225 ~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~ 302 (334)
T cd08234 225 YGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGS--FINPYTFPRAIALLESGKID 302 (334)
T ss_pred CCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEe--ccCHHHHHHHHHHHHcCCCC
Confidence 7899999999854 47888999999999999985432 11111111222234444442 23456788999999999986
Q ss_pred E--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 296 T--VIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 296 ~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
+ .+...+++++++++++.+.+ ...||+|+
T Consensus 303 ~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 303 VKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred hhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 4 35678999999999999998 77889886
No 106
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=2.2e-36 Score=272.68 Aligned_cols=295 Identities=22% Similarity=0.297 Sum_probs=233.5
Q ss_pred eEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC---C-CCCCCCeeecccceEEEEecCCCCCCCCCCCEEEE-
Q 020314 22 LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP---F-LPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVA- 96 (327)
Q Consensus 22 l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~---~-~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~- 96 (327)
+++++.+.|++.++||+||+.++|+|++|++...+.... + ....+|.++|||++|+|+++|++++++++||+|++
T Consensus 39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 118 (384)
T cd08265 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE 118 (384)
T ss_pred EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence 999999999999999999999999999999987642110 0 01256789999999999999999999999999985
Q ss_pred --------------------------EccCcccceeEeecCCceeeCCCCC-------ChhhhcccCchHHHHHHHHHHh
Q 020314 97 --------------------------VLSGGGLAEFAVAKESLTVARPQEV-------SAAEGAGIPCAGLTAHQALTQS 143 (327)
Q Consensus 97 --------------------------~~~~g~~a~~~~~~~~~~~~ip~~~-------~~~~aa~~~~~~~ta~~al~~~ 143 (327)
+..+|+|++|+.++.+.++++|+.+ +.+ +++++.++++||+++...
T Consensus 119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~ 197 (384)
T cd08265 119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR 197 (384)
T ss_pred CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence 2236899999999999999999863 344 666777889999998655
Q ss_pred -hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCC---C--cccccCC
Q 020314 144 -LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTP---D--GAALKSP 215 (327)
Q Consensus 144 -~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~---~--~~~~~~~ 215 (327)
.++ ++|++|+|+| +|++|++++++|+..|+ +++++++ +++.++++++|++.++++.+. + ..+.+.+
T Consensus 198 ~~~~-----~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~ 271 (384)
T cd08265 198 GGGF-----RPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVT 271 (384)
T ss_pred cCCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhc
Confidence 567 8999999996 79999999999999999 7888875 467888899999998887643 2 2345556
Q ss_pred CCCcccEEEeCCCCC--cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCc
Q 020314 216 SGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK 293 (327)
Q Consensus 216 ~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 293 (327)
.++++|+++|++|++ .+..++++++++|+++.+|..... ..+......++...+.+.........+++++++++++.
T Consensus 272 ~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~ 350 (384)
T cd08265 272 KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATT-VPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGK 350 (384)
T ss_pred CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCC-CcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCC
Confidence 677899999999964 477889999999999999854321 12222334445555665433334557899999999999
Q ss_pred eeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 294 LKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 294 l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
+++ ++.+.|++++++++++.+.++ ..||+|+
T Consensus 351 l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 351 IDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred CChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 875 356789999999999997665 5788876
No 107
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=6.2e-36 Score=263.26 Aligned_cols=310 Identities=30% Similarity=0.402 Sum_probs=248.2
Q ss_pred EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314 8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87 (327)
Q Consensus 8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 87 (327)
|||.+...+. ++.+.+.+.+.+.+.++||+|++.++++|+.|++...+..+ ..+|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~ 75 (320)
T cd05286 1 KAVRIHKTGG-PEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTG 75 (320)
T ss_pred CeEEEecCCC-ccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCC
Confidence 4677765554 45677777777778999999999999999999999887653 245778999999999999999999
Q ss_pred CCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHH
Q 020314 88 FKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167 (327)
Q Consensus 88 ~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G 167 (327)
+++||+|+++...|++++|+.++.+.++++|++++..+++.++..+.++|+++.+..++ .++++|+|+|++|++|
T Consensus 76 ~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-----~~g~~vlI~g~~g~~g 150 (320)
T cd05286 76 FKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV-----KPGDTVLVHAAAGGVG 150 (320)
T ss_pred CCCCCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC-----CCCCEEEEEcCCchHH
Confidence 99999999853378999999999999999999999999999999999999999877877 8899999999999999
Q ss_pred HHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcE
Q 020314 168 LYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK 244 (327)
Q Consensus 168 ~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~ 244 (327)
++++++++.+|+++++++++ ++.+.++++|++.+++....+ ..+...+.++++|+++||+++.....++++++++|+
T Consensus 151 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~ 230 (320)
T cd05286 151 LLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGT 230 (320)
T ss_pred HHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcE
Confidence 99999999999999998854 677888889998888766543 234444566789999999998778899999999999
Q ss_pred EEeecCCchhHHHHhhhhccccceeeEEEE---eCCC----HHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcC
Q 020314 245 VIDFNPSPRVLLTFAWKKLTFSKKQLVPFS---VSPK----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISG 317 (327)
Q Consensus 245 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~ 317 (327)
++.+|........+....+..+...+.... .... .+.++.+++++.++.+.+...+.|++++++++++.+.++
T Consensus 231 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~ 310 (320)
T cd05286 231 LVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESR 310 (320)
T ss_pred EEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcC
Confidence 999985432111111111112222222211 1112 244567888999999887777889999999999999999
Q ss_pred CCCccEEEeC
Q 020314 318 RATGKIIVEP 327 (327)
Q Consensus 318 ~~~gkvvv~~ 327 (327)
...||+++.|
T Consensus 311 ~~~~~vv~~~ 320 (320)
T cd05286 311 KTTGKLLLIP 320 (320)
T ss_pred CCCceEEEeC
Confidence 8889999875
No 108
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=9.1e-36 Score=262.85 Aligned_cols=312 Identities=29% Similarity=0.465 Sum_probs=251.9
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||+++++++++ ++.+++.+.+.|.+.+++|+|++.++++|+.|++...|..+. ....|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~ 77 (325)
T cd08253 1 MRAIRYHEFGA-PDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVD 77 (325)
T ss_pred CceEEEcccCC-cccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCC
Confidence 68999987764 566888899999999999999999999999999988776532 125688999999999999999999
Q ss_pred CCCCCCEEEEEc-----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314 87 NFKVGDKVVAVL-----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA 161 (327)
Q Consensus 87 ~~~~Gd~V~~~~-----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g 161 (327)
++++||+|++.. ..|++++|+.++.+.++++|+++++.+++.+++++.+||+++....++ .++++++|+|
T Consensus 78 ~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~-----~~g~~vlI~g 152 (325)
T cd08253 78 GLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGA-----KAGETVLVHG 152 (325)
T ss_pred CCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCC-----CCCCEEEEEc
Confidence 999999999865 368999999999999999999999999999999999999999877888 8899999999
Q ss_pred CCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccc
Q 020314 162 ASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPN 238 (327)
Q Consensus 162 ~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 238 (327)
+++++|++++++++..|++++++++. ++.+.+.++|.+.+++....+ ......+.++++|+++||+++......+++
T Consensus 153 ~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 232 (325)
T cd08253 153 GSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDV 232 (325)
T ss_pred CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHh
Confidence 99999999999999999999998864 677777889998888776544 223334455689999999998777888899
Q ss_pred cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-CCC----HHHHHHHHHHHHCCceeEecceeeccccHHHHHHH
Q 020314 239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-SPK----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAK 313 (327)
Q Consensus 239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~ 313 (327)
++++|+++.++.... ........+..+...+.+... ... .+.++.+.+++.++.+++.....+++++++++++.
T Consensus 233 l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 311 (325)
T cd08253 233 LAPGGRIVVYGSGGL-RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEA 311 (325)
T ss_pred hCCCCEEEEEeecCC-cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHH
Confidence 999999999885431 111111122223333333221 112 23456677788888888777788999999999999
Q ss_pred HhcCCCCccEEEeC
Q 020314 314 SISGRATGKIIVEP 327 (327)
Q Consensus 314 ~~~~~~~gkvvv~~ 327 (327)
+.++...||+++++
T Consensus 312 ~~~~~~~~kvv~~~ 325 (325)
T cd08253 312 VESGGAIGKVVLDP 325 (325)
T ss_pred HHcCCCcceEEEeC
Confidence 99998899999874
No 109
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=5.4e-36 Score=266.28 Aligned_cols=301 Identities=26% Similarity=0.313 Sum_probs=235.0
Q ss_pred eccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCC
Q 020314 13 DSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGD 92 (327)
Q Consensus 13 ~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 92 (327)
++++.+ +++++.+.|.+.++||+||+.++++|+.|+.++.+..........|.++|+|++|+|+++|++++++++||
T Consensus 5 ~~~~~~---~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 81 (340)
T TIGR00692 5 TKPGYG---AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD 81 (340)
T ss_pred ccCCCC---cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCC
Confidence 344544 88999999999999999999999999999998765421111123567899999999999999999999999
Q ss_pred EEEEE---------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhC
Q 020314 93 KVVAV---------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG 145 (327)
Q Consensus 93 ~V~~~---------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~ 145 (327)
+|++. ...|+|++|.+++++.++++|++++.+.+ +++.++.++++++ ...
T Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~ 158 (340)
T TIGR00692 82 YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAG 158 (340)
T ss_pred EEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--Hcc
Confidence 99872 24689999999999999999999998654 5677888998876 334
Q ss_pred CccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCccc
Q 020314 146 VKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYD 221 (327)
Q Consensus 146 ~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d 221 (327)
+ +++++++|.| +|++|.+++++|+.+|++ |+++.++ ++.+.++++|++.++++...+ ..+.+...++++|
T Consensus 159 ~-----~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d 232 (340)
T TIGR00692 159 P-----ISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVD 232 (340)
T ss_pred C-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCC
Confidence 4 7899999976 799999999999999996 7777543 577788899998888776544 2233445567899
Q ss_pred EEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHH-hhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee--Ee
Q 020314 222 AVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTF-AWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK--TV 297 (327)
Q Consensus 222 ~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~ 297 (327)
+++||+|+. .+...+++++++|+++.+|..... ... ....+.++...+.+.......+.+.+++++++++.++ +.
T Consensus 233 ~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 311 (340)
T TIGR00692 233 VFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-VTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPI 311 (340)
T ss_pred EEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-cccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHh
Confidence 999998864 478889999999999999864321 111 1224556666666544333445678899999999986 45
Q ss_pred cceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 298 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+.+.+++++++++++.+.+++. ||+|+++
T Consensus 312 ~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 312 ITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred eeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 6788999999999999998874 9999874
No 110
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=9.9e-36 Score=261.55 Aligned_cols=295 Identities=22% Similarity=0.263 Sum_probs=236.2
Q ss_pred cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHH-hcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc
Q 020314 20 AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQ-KGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL 98 (327)
Q Consensus 20 ~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (327)
+.+++++.+.|++.++||+||+.++++|+.|++.. .|..... ...+|.++|+|++|+|+++|++++++++||+|+++
T Consensus 5 ~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~- 82 (312)
T cd08269 5 GRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL- 82 (312)
T ss_pred CeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe-
Confidence 45999999999999999999999999999999987 6654211 11347899999999999999999999999999985
Q ss_pred cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC
Q 020314 99 SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN 178 (327)
Q Consensus 99 ~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g 178 (327)
..|+|++|+.++.+.++++|+++ ..++....++.++++++. ..++ +++++|+|+| +|++|.+++++|+.+|
T Consensus 83 ~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~-----~~~~~vlI~g-~g~vg~~~~~la~~~g 153 (312)
T cd08269 83 SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWI-----RAGKTVAVIG-AGFIGLLFLQLAAAAG 153 (312)
T ss_pred cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 36899999999999999999988 233332377889999985 7777 8999999997 7999999999999999
Q ss_pred Ce-EEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCch
Q 020314 179 TH-VTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR 253 (327)
Q Consensus 179 ~~-v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 253 (327)
++ ++++++. ++.++++++|++.+++....+ ..+.+.+.+.++|+++||+|+. .+..++++++++|+++.+|....
T Consensus 154 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~ 233 (312)
T cd08269 154 ARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQD 233 (312)
T ss_pred CcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC
Confidence 98 8888754 577788899998888765443 2344455667899999999865 47889999999999999985532
Q ss_pred hHHHHhhhhccccceeeEEEEeC---CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCC-CccEEE
Q 020314 254 VLLTFAWKKLTFSKKQLVPFSVS---PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRA-TGKIIV 325 (327)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv 325 (327)
....+....+.+++..+.++... ...+.++.++++++++.+.+ ++.+.|++++++++++.+.+++. .+|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 234 GPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred CCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 22233334566777776654322 12468899999999999886 35678999999999999999875 578876
No 111
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2.1e-35 Score=261.51 Aligned_cols=300 Identities=26% Similarity=0.385 Sum_probs=242.3
Q ss_pred EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314 8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87 (327)
Q Consensus 8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 87 (327)
|++++.+.|. .+++++.+.|.+.+++|+|++.++++|+.|++...|.++ ...+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~---~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~ 74 (330)
T cd08245 1 KAAVVHAAGG---PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEG 74 (330)
T ss_pred CeEEEecCCC---CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCcc
Confidence 6888987753 399999999999999999999999999999999888753 2256789999999999999999999
Q ss_pred CCCCCEEEEE----------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314 88 FKVGDKVVAV----------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139 (327)
Q Consensus 88 ~~~Gd~V~~~----------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 139 (327)
+++||+|+.. ...|+|++|+.++...++++|+++++.+++.+++.+.+||++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~ 154 (330)
T cd08245 75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA 154 (330)
T ss_pred cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence 9999999842 136899999999999999999999999999999999999999
Q ss_pred HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCC
Q 020314 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGR 218 (327)
Q Consensus 140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~ 218 (327)
+.. .++ +++++|||+| +|++|++++++|+..|.+|++++++ ++.+.++++|++.+++....+.... . .+
T Consensus 155 l~~-~~~-----~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~-~~ 224 (330)
T cd08245 155 LRD-AGP-----RPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA--A-AG 224 (330)
T ss_pred HHh-hCC-----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh--c-cC
Confidence 854 667 8899999997 6889999999999999999988854 6778888899888877654332111 2 24
Q ss_pred cccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEe
Q 020314 219 KYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297 (327)
Q Consensus 219 ~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 297 (327)
++|+++|++++ .....++++++++|+++.++.............+..++.++.+.. ......++.+++++.++.+.+
T Consensus 225 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~~l~~- 302 (330)
T cd08245 225 GADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGST-HGGRADLQEALDFAAEGKVKP- 302 (330)
T ss_pred CCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEec-cCCHHHHHHHHHHHHcCCCcc-
Confidence 69999999875 457889999999999999985432212111222334455555432 234678889999999999876
Q ss_pred cceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 298 IDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 298 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
..+.+++++++++++.+.++...||+|+
T Consensus 303 ~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 303 MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 4468999999999999999999999875
No 112
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=2.8e-35 Score=261.70 Aligned_cols=295 Identities=21% Similarity=0.284 Sum_probs=231.3
Q ss_pred cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHh-cCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc
Q 020314 20 AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQK-GMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL 98 (327)
Q Consensus 20 ~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (327)
+.+++++.++|++.++||+||+.++++|+.|++... +.++.. ...+|.++|+|++|+|+++|++++++++||+|++..
T Consensus 7 ~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~-~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~ 85 (339)
T cd08232 7 GDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTV-RLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNP 85 (339)
T ss_pred CceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcc-cccCCeecCccceEEEEeeCCCCCcCCCCCEEEEcc
Confidence 349999999999999999999999999999998763 333211 124578999999999999999999999999998621
Q ss_pred --------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCC
Q 020314 99 --------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGV 146 (327)
Q Consensus 99 --------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~ 146 (327)
.+|+|++|+.++.+.++++|++++.++++. ..++.++|+++.+. ..
T Consensus 86 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~-~~ 163 (339)
T cd08232 86 SRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRA-GD 163 (339)
T ss_pred CCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhc-CC
Confidence 258999999999999999999999999876 57888999998543 33
Q ss_pred ccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314 147 KLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVI 224 (327)
Q Consensus 147 ~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~ 224 (327)
.++++|||.| +|++|++++++|+++|+ ++++++++ ++.++++++|.+.+++++..+.... ....+++|+++
T Consensus 164 -----~~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~-~~~~~~vd~vl 236 (339)
T cd08232 164 -----LAGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAY-AADKGDFDVVF 236 (339)
T ss_pred -----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhh-hccCCCccEEE
Confidence 4789999987 79999999999999999 78888754 5667888999999888765431111 11234699999
Q ss_pred eCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--eccee
Q 020314 225 NCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSK 301 (327)
Q Consensus 225 d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~ 301 (327)
|+.|+ ..+..++++|+++|+++.+|..... .........+++..+.+.. ...+.++.++++++.+.+++ .+.+.
T Consensus 237 d~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (339)
T cd08232 237 EASGAPAALASALRVVRPGGTVVQVGMLGGP-VPLPLNALVAKELDLRGSF--RFDDEFAEAVRLLAAGRIDVRPLITAV 313 (339)
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-ccCcHHHHhhcceEEEEEe--cCHHHHHHHHHHHHcCCCCchhheeEE
Confidence 99986 4588899999999999999854311 1111222244555555533 23567889999999998863 35678
Q ss_pred eccccHHHHHHHHhcCCCCccEEEeC
Q 020314 302 HSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 302 ~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
|++++++++++.+.++...||+|+++
T Consensus 314 ~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 314 FPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred ecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 99999999999999888899999864
No 113
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=2.2e-35 Score=264.68 Aligned_cols=307 Identities=22% Similarity=0.253 Sum_probs=235.0
Q ss_pred ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
+|++.+++.+ +.+++++.+.|.+.++||+||+.++++|++|++...+.........+|.++|||++|+|+++|+++
T Consensus 17 ~~~~~~~~~~----~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (364)
T PLN02702 17 ENMAAWLVGV----NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV 92 (364)
T ss_pred ccceEEEecC----CceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence 3444555443 348888888888999999999999999999999887632110011357799999999999999999
Q ss_pred CCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHH
Q 020314 86 KNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH 137 (327)
Q Consensus 86 ~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~ 137 (327)
+++++||+|++.+ .+|+|++|+.++...++++|+++++++++.. .++.+++
T Consensus 93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~ 171 (364)
T PLN02702 93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGV 171 (364)
T ss_pred CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHH
Confidence 9999999998621 1589999999999999999999999988753 3445688
Q ss_pred HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCC--CCc--cc
Q 020314 138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKT--PDG--AA 211 (327)
Q Consensus 138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~--~~~--~~ 211 (327)
+++ +..++ .++++|+|+| +|++|++++++|+.+|++ ++++.+ +++.++++++|++.++++.. .+. .+
T Consensus 172 ~~~-~~~~~-----~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 244 (364)
T PLN02702 172 HAC-RRANI-----GPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEV 244 (364)
T ss_pred HHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHH
Confidence 887 67777 7899999997 799999999999999996 555553 36778889999998876542 221 11
Q ss_pred c--cCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314 212 L--KSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL 288 (327)
Q Consensus 212 ~--~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
. ....++++|++||++|+ ..+..++++++++|+++.+|..... .......+.++++++.+.+. ....++.++++
T Consensus 245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 321 (364)
T PLN02702 245 EEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE-MTVPLTPAAAREVDVVGVFR--YRNTWPLCLEF 321 (364)
T ss_pred HHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC-CcccHHHHHhCccEEEEecc--ChHHHHHHHHH
Confidence 1 11334579999999995 4589999999999999999854321 22233445667777776432 24578889999
Q ss_pred HHCCcee--Eecceeecc--ccHHHHHHHHhcCCCCccEEEeC
Q 020314 289 VKEGKLK--TVIDSKHSL--SKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 289 ~~~g~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
++++.+. +.+.+.|++ +++++|++.+.+++..+|+++.+
T Consensus 322 ~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~~ 364 (364)
T PLN02702 322 LRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364 (364)
T ss_pred HHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEeC
Confidence 9999875 345677555 79999999999888889999863
No 114
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=4.5e-35 Score=258.49 Aligned_cols=313 Identities=28% Similarity=0.418 Sum_probs=250.1
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||++.+...+. +..+++++.+.+.+.+++++||+.++++|+.|+....+.++. +..+|..+|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~ 77 (325)
T TIGR02824 1 MKAIEITEPGG-PEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP--PPGASDILGLEVAGEVVAVGEGVS 77 (325)
T ss_pred CceEEEccCCC-cccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCCccceeEEEEEEeCCCCC
Confidence 68889877664 566777777777789999999999999999999988776531 124578999999999999999999
Q ss_pred CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314 87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV 166 (327)
Q Consensus 87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~ 166 (327)
++++||+|+++..+|++++|+.++...++++|+++++.+++.++.++.++|+++.+...+ +++++++|+|++|++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~-----~~~~~vlv~g~~~~~ 152 (325)
T TIGR02824 78 RWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGL-----KAGETVLIHGGASGI 152 (325)
T ss_pred CCCCCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCC-----CCCCEEEEEcCcchH
Confidence 999999999976669999999999999999999999999999999999999998778888 889999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCc
Q 020314 167 GLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243 (327)
Q Consensus 167 G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G 243 (327)
|.+++++++..|+++++++++ ++.+.++.+|.+.+++....+ ..+.....++++|+++|++|+..+..++++++++|
T Consensus 153 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g 232 (325)
T TIGR02824 153 GTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDG 232 (325)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCc
Confidence 999999999999999988854 566777888988777665443 22333445567999999999877888899999999
Q ss_pred EEEeecCCchhHHHHhhhhccccceeeEEEEeCC---------CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314 244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP---------KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS 314 (327)
Q Consensus 244 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~ 314 (327)
+++.+|........+....+..++..+.+..... ..+.+..++++++++.+.+...+.+++++++++++.+
T Consensus 233 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 312 (325)
T TIGR02824 233 RIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALM 312 (325)
T ss_pred EEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHH
Confidence 9999875331111112222223444444432211 1234567888999999887777889999999999999
Q ss_pred hcCCCCccEEEeC
Q 020314 315 ISGRATGKIIVEP 327 (327)
Q Consensus 315 ~~~~~~gkvvv~~ 327 (327)
.++...||+++++
T Consensus 313 ~~~~~~~~~v~~~ 325 (325)
T TIGR02824 313 ESGDHIGKIVLTV 325 (325)
T ss_pred HhCCCcceEEEeC
Confidence 9988889999864
No 115
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=6.8e-35 Score=255.20 Aligned_cols=272 Identities=24% Similarity=0.375 Sum_probs=224.0
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||+|++++.+ +..+++++.+.|++.++||+||+.++++|+.|++...|.+. +...|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~ 75 (306)
T cd08258 1 MKALVKTGPG--PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVE 75 (306)
T ss_pred CeeEEEecCC--CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcC
Confidence 5899987643 45699999999999999999999999999999998888753 234578999999999999999999
Q ss_pred CCCCCCEEEEEcc----------------------------CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314 87 NFKVGDKVVAVLS----------------------------GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138 (327)
Q Consensus 87 ~~~~Gd~V~~~~~----------------------------~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 138 (327)
.+++||+|++... .|+|++|++++...++++|+++++++++ +..++.++|+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~ 154 (306)
T cd08258 76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH 154 (306)
T ss_pred cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence 9999999988531 4899999999999999999999999887 6777889999
Q ss_pred HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-C--CcHHHHHhcCCCEEEeCCCCCc--cccc
Q 020314 139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-A--RNIELVKSLGADEVLDYKTPDG--AALK 213 (327)
Q Consensus 139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~--~~~~~~~~lg~~~v~~~~~~~~--~~~~ 213 (327)
++....++ +++++|+|.| +|++|.+++++|+..|++|+++.+ + ++.++++++|++.+ ++...+. .+..
T Consensus 155 ~l~~~~~~-----~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~ 227 (306)
T cd08258 155 AVAERSGI-----RPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNE 227 (306)
T ss_pred HHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHH
Confidence 99888887 8899999976 799999999999999999887742 2 36677889999877 7655442 2334
Q ss_pred CCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314 214 SPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG 292 (327)
Q Consensus 214 ~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 292 (327)
...++++|+++|++|+ ..+..++++++++|+++.+|........+....+.++++++.+.. ....++++++++++++|
T Consensus 228 ~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 228 ITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSR-SSTPASWETALRLLASG 306 (306)
T ss_pred HcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEe-cCchHhHHHHHHHHhcC
Confidence 4556789999999975 457888999999999999987653333444556667899998844 45677899999998875
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.1e-34 Score=256.24 Aligned_cols=313 Identities=29% Similarity=0.414 Sum_probs=247.3
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK 86 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 86 (327)
||+|++...+. ++.+++++.+.|.+.+++++|++.++++|+.|.....+..... ...|..+|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~ 77 (328)
T cd08268 1 MRAVRFHQFGG-PEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVT 77 (328)
T ss_pred CeEEEEeccCC-cceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCC
Confidence 68999987664 5668888888888999999999999999999999887765321 23477899999999999999999
Q ss_pred CCCCCCEEEEEc-----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314 87 NFKVGDKVVAVL-----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA 161 (327)
Q Consensus 87 ~~~~Gd~V~~~~-----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g 161 (327)
++++||+|+++. ..|++++|+.++.+.++++|+++++.+++.++.++.++|+++.....+ .++++++|+|
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vli~g 152 (328)
T cd08268 78 GFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGL-----RPGDSVLITA 152 (328)
T ss_pred cCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCC-----CCCCEEEEec
Confidence 999999999864 348999999999999999999999999999999999999999777777 7899999999
Q ss_pred CCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccc
Q 020314 162 ASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPN 238 (327)
Q Consensus 162 ~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 238 (327)
++|++|++++++++..|++++.++++ ++.+.+..+|.+.+++....+ ..+.....++++|++++++++.....++++
T Consensus 153 ~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 232 (328)
T cd08268 153 ASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADA 232 (328)
T ss_pred CccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHh
Confidence 99999999999999999999988854 567777788888887766543 223334455679999999998778888999
Q ss_pred cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC---CCH----HHHHHHHHHHHCCceeEecceeeccccHHHHH
Q 020314 239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS---PKG----ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAW 311 (327)
Q Consensus 239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~ 311 (327)
++++|+++.+|................++..+.+.... .++ ..++.+.+++..+.+.+.....|+++++.+++
T Consensus 233 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (328)
T cd08268 233 LAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAH 312 (328)
T ss_pred hccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHH
Confidence 99999999987542211111111122233333332211 122 34455666777888877777889999999999
Q ss_pred HHHhcCCCCccEEEeC
Q 020314 312 AKSISGRATGKIIVEP 327 (327)
Q Consensus 312 ~~~~~~~~~gkvvv~~ 327 (327)
+.+.++...||+++++
T Consensus 313 ~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 313 RYLESGQQIGKIVVTP 328 (328)
T ss_pred HHHHcCCCCceEEEeC
Confidence 9999988889999874
No 117
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-33 Score=251.26 Aligned_cols=311 Identities=31% Similarity=0.425 Sum_probs=242.6
Q ss_pred EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314 8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87 (327)
Q Consensus 8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 87 (327)
|++.+...+. ++.+++++.+.|++.+++|+||+.++++|+.|++...|..+. ....|..+|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~ 77 (337)
T cd08275 1 RAVVLTGFGG-LDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKD 77 (337)
T ss_pred CeEEEcCCCC-ccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcC
Confidence 4677766654 456888888888899999999999999999999988876532 1145778999999999999999999
Q ss_pred CCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHH
Q 020314 88 FKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167 (327)
Q Consensus 88 ~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G 167 (327)
+++||+|+++...|++++|..++.+.++++|+++++.+++.+++++.++|+++.+..++ +++++|+|+|++|++|
T Consensus 78 ~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vli~g~~g~~g 152 (337)
T cd08275 78 FKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL-----RPGQSVLVHSAAGGVG 152 (337)
T ss_pred CCCCCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC-----CCCCEEEEEcCcchHH
Confidence 99999999976669999999999999999999999999999999999999999888887 8999999999889999
Q ss_pred HHHHHHHHhC-CCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccccccccCCCcE
Q 020314 168 LYAVQLAKLG-NTHVTATCGARNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK 244 (327)
Q Consensus 168 ~~~~~la~~~-g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~ 244 (327)
++++++|+.. +..++...++++.+.++.+|.+.+++....+. .+...+ ++++|+++||+|+.....++++++++|+
T Consensus 153 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~v~~~~g~~~~~~~~~~l~~~g~ 231 (337)
T cd08275 153 LAAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKIS-PEGVDIVLDALGGEDTRKSYDLLKPMGR 231 (337)
T ss_pred HHHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHh-CCCceEEEECCcHHHHHHHHHhhccCcE
Confidence 9999999988 33332222234677778899988887765442 222233 4679999999998778889999999999
Q ss_pred EEeecCCchh---HHH-------------HhhhhccccceeeEEEEe----CCC---HHHHHHHHHHHHCCceeEeccee
Q 020314 245 VIDFNPSPRV---LLT-------------FAWKKLTFSKKQLVPFSV----SPK---GENLDFLVKLVKEGKLKTVIDSK 301 (327)
Q Consensus 245 ~v~~g~~~~~---~~~-------------~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~g~l~~~~~~~ 301 (327)
++.+|..... ... ........++..+.+... ... ...+.++++++.++.+.+.....
T Consensus 232 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (337)
T cd08275 232 LVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSV 311 (337)
T ss_pred EEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeE
Confidence 9998854311 000 000122233333333221 111 23467888999999988777788
Q ss_pred eccccHHHHHHHHhcCCCCccEEEeC
Q 020314 302 HSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 302 ~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
|++++++++++.+.++...||+++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 312 FPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred EcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 99999999999999998889999875
No 118
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=3.7e-34 Score=250.27 Aligned_cols=289 Identities=27% Similarity=0.412 Sum_probs=234.4
Q ss_pred CCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc--cCccccee
Q 020314 29 VPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL--SGGGLAEF 106 (327)
Q Consensus 29 ~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~--~~g~~a~~ 106 (327)
.|++.+++|+||+.++++|+.|++...+.++.. ..+|.++|+|++|+|+++|++++++++||+|+++. ..|+|++|
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~ 79 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTM--PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATL 79 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCC--CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeE
Confidence 467889999999999999999999988876421 24678999999999999999999999999999864 35899999
Q ss_pred EeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 107 AVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 107 ~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
+.++.+.++++|+++++++++.++.++.++|+++ +..++ +++++++|+++++++|++++++++++|++++++++
T Consensus 80 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~-----~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~ 153 (303)
T cd08251 80 VTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGL-----AKGEHILIQTATGGTGLMAVQLARLKGAEIYATAS 153 (303)
T ss_pred EEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCC-----CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcC
Confidence 9999999999999999999999999999999998 56677 89999999999999999999999999999999885
Q ss_pred C-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchh-----HHHH
Q 020314 187 A-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRV-----LLTF 258 (327)
Q Consensus 187 ~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~ 258 (327)
. ++.+.++.+|.+.+++....+ ..+...+.++++|+++|++++.....++++++++|+++.++..... ....
T Consensus 154 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 233 (303)
T cd08251 154 SDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV 233 (303)
T ss_pred CHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhH
Confidence 4 677788899999888876654 2244455667899999999877788889999999999998743211 1111
Q ss_pred hhhhccccceeeEEEEeC---CCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 259 AWKKLTFSKKQLVPFSVS---PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
...+..++...+...... ...+.+.+++++++++.+++...+.|++++++++++.+.+++..||+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 234 LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 222333344333321111 1234577888999999998777788999999999999999988888874
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=2.8e-33 Score=246.75 Aligned_cols=311 Identities=32% Similarity=0.448 Sum_probs=246.6
Q ss_pred eEEEEEeccCCCccceEEeeccCCCCC-CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314 7 MHAVQYDSYGGGVAGLKHVEVPVPTPN-KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85 (327)
Q Consensus 7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 85 (327)
|+|+++...+. ++.+++.+.+ |.+. +++++|++.++++|+.|++...|.+.. ....|..+|+|++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~ 76 (323)
T cd08241 1 MKAVVCKELGG-PEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGV 76 (323)
T ss_pred CeEEEEecCCC-cceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCC
Confidence 68999886654 4567777777 6656 499999999999999999988776531 11335689999999999999999
Q ss_pred CCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314 86 KNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA 165 (327)
Q Consensus 86 ~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~ 165 (327)
+.+++||+|+++...|++++++.++.+.++++|++++..+++.+..++.+||+++.+..++ +++++|+|+|++|+
T Consensus 77 ~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vli~g~~~~ 151 (323)
T cd08241 77 TGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARL-----QPGETVLVLGAAGG 151 (323)
T ss_pred CCCCCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCC-----CCCCEEEEEcCCch
Confidence 9999999999965478999999999999999999999999999999999999998777777 88999999998899
Q ss_pred HHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCC
Q 020314 166 VGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTT 242 (327)
Q Consensus 166 ~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~ 242 (327)
+|++++++++..|++++.++++ ++.+.++++|.+.+++....+ ..+...+.++++|.++|++|+.....++++++++
T Consensus 152 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~ 231 (323)
T cd08241 152 VGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWG 231 (323)
T ss_pred HHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccC
Confidence 9999999999999999988854 677778888988887766544 2233445566899999999987788899999999
Q ss_pred cEEEeecCCchhHHHHhhhhccccceeeEEEEeC----C----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314 243 GKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS----P----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS 314 (327)
Q Consensus 243 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~ 314 (327)
|+++.+|........+.......++..+.+.... . ..+.++.+++++.++.+.+.....|++++++++++.+
T Consensus 232 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (323)
T cd08241 232 GRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRAL 311 (323)
T ss_pred CEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHH
Confidence 9999988532211101111122334444443211 1 1356788999999999887777889999999999999
Q ss_pred hcCCCCccEEEe
Q 020314 315 ISGRATGKIIVE 326 (327)
Q Consensus 315 ~~~~~~gkvvv~ 326 (327)
.++...||++++
T Consensus 312 ~~~~~~~~vvv~ 323 (323)
T cd08241 312 ADRKATGKVVLT 323 (323)
T ss_pred HhCCCCCcEEeC
Confidence 988888898864
No 120
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=3e-32 Score=222.60 Aligned_cols=311 Identities=23% Similarity=0.267 Sum_probs=241.1
Q ss_pred ceEEEEEeccCCC---ccceEEee--ccC-CCCCCCeEEEEEeEEeeChhhHHHHhcCCCC-CCCCCCC--eeecccceE
Q 020314 6 VMHAVQYDSYGGG---VAGLKHVE--VPV-PTPNKDEALLKVEAASINPIDWKLQKGMLRP-FLPRKFP--FIPASDVAG 76 (327)
Q Consensus 6 ~~~a~~~~~~g~~---~~~l~~~~--~~~-~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~p--~~~G~e~~G 76 (327)
+.+.|++..+-.+ ..++.+.+ .++ .++.+++|+||++|.+.+|.....++...+. +.+.-.| .+.| ..+|
T Consensus 3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~ 81 (343)
T KOG1196|consen 3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVA 81 (343)
T ss_pred cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceE
Confidence 4677888763221 23455443 333 3478889999999999999987766543332 1111011 2344 6789
Q ss_pred EEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCc--eeeCC--CCCChhh-hcccCchHHHHHHHHHHhhCCccCCC
Q 020314 77 EVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESL--TVARP--QEVSAAE-GAGIPCAGLTAHQALTQSLGVKLDGS 151 (327)
Q Consensus 77 ~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~--~~~ip--~~~~~~~-aa~~~~~~~ta~~al~~~~~~~~~~~ 151 (327)
+|++ ++.+++++||.|.+.. +|.+|.+++... .++++ .++++.- ..++.++..|||-++.+....
T Consensus 82 kVi~--S~~~~~~~GD~v~g~~---gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p----- 151 (343)
T KOG1196|consen 82 KVID--SGHPNYKKGDLVWGIV---GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP----- 151 (343)
T ss_pred EEEe--cCCCCCCcCceEEEec---cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC-----
Confidence 9999 6778899999999975 999999997653 33433 4444444 455678899999999988888
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHH-HhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELV-KSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCV 227 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~-~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~ 227 (327)
++|++|+|.||+|.+|+.+.|+|+.+|++|++++ +.+|.+++ .++|.|..+||.++. .+.++....+|+|+.||++
T Consensus 152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV 231 (343)
T KOG1196|consen 152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV 231 (343)
T ss_pred CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence 9999999999999999999999999999999999 55888877 488999999999874 4567778889999999999
Q ss_pred CCCcccccccccCCCcEEEeecCCch-----hHHHHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCceeEec
Q 020314 228 TGIPWSTFEPNLGTTGKVIDFNPSPR-----VLLTFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKTVI 298 (327)
Q Consensus 228 g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~ 298 (327)
|+..++..+..|+..||++.+|.-+. ...--.+..+.++++++.++.... ..+.++.+..++++|+|+..-
T Consensus 232 GG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e 311 (343)
T KOG1196|consen 232 GGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE 311 (343)
T ss_pred CcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence 99999999999999999999985331 111224467788999998865422 356678899999999999877
Q ss_pred ceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314 299 DSKHSLSKAEDAWAKSISGRATGKIIVEP 327 (327)
Q Consensus 299 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 327 (327)
+-.-.+++.|.||..|.+|++.||.++.+
T Consensus 312 di~~Glen~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 312 DIADGLENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred hHHHHHhccHHHHHHHhccCcccceEEEe
Confidence 76678999999999999999999999864
No 121
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.4e-33 Score=243.80 Aligned_cols=231 Identities=19% Similarity=0.237 Sum_probs=187.4
Q ss_pred eecccceEEEEecCCCCC------CCCCCCEEEEEc----------------------------------cCcccceeEe
Q 020314 69 IPASDVAGEVIGLGSEVK------NFKVGDKVVAVL----------------------------------SGGGLAEFAV 108 (327)
Q Consensus 69 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~----------------------------------~~g~~a~~~~ 108 (327)
++|||++|+|+++|++++ ++++||||+..+ .+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 479999999999999999 899999997632 1489999999
Q ss_pred ecCC-ceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEe-
Q 020314 109 AKES-LTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATC- 185 (327)
Q Consensus 109 ~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~- 185 (327)
++++ .++++|+++++++++.+++.+.|+|+++. .... .++++|||+| +|++|++++|+|+++|++ |++++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~-----~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~ 153 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGD-----LKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADP 153 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC
Confidence 9997 79999999999999999999999999984 4444 6899999998 599999999999999996 77776
Q ss_pred cCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc-hhHHHHhhhhc
Q 020314 186 GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKL 263 (327)
Q Consensus 186 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~ 263 (327)
+++|+++++++|++.++++.+......+.+.+.++|++||++|.+. +..++++++++|+++.+|... .....+....+
T Consensus 154 ~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~ 233 (280)
T TIGR03366 154 SPDRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233 (280)
T ss_pred CHHHHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence 4478889999999998876543222334455678999999999765 889999999999999999543 22234445667
Q ss_pred cccceeeEEEEeCCCHHHHHHHHHHHHCC--ce--eEecceeeccccH
Q 020314 264 TFSKKQLVPFSVSPKGENLDFLVKLVKEG--KL--KTVIDSKHSLSKA 307 (327)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~l--~~~~~~~~~~~~~ 307 (327)
.++++++.+ +.....++++++++++.++ ++ +.+++++|+++|+
T Consensus 234 ~~~~~~i~g-~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 234 VRRWLTIRG-VHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HhCCcEEEe-cCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 778888887 3445667899999999974 43 3578889999873
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=3e-32 Score=236.58 Aligned_cols=280 Identities=28% Similarity=0.360 Sum_probs=225.9
Q ss_pred CeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCce
Q 020314 35 DEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLT 114 (327)
Q Consensus 35 ~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~ 114 (327)
+||+||+.++++|++|++...|..+ .+|.++|||++|+|+++|++++++++||+|+++ ..|+|++|+.++.+.+
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~-----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-~~g~~~~~~~~~~~~~ 74 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP-----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-APGAFATHVRVDARLV 74 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC-----CCCCccceeeeEEEEeecCCccCCCCCCEEEEE-ecCcccceEEechhhe
Confidence 5899999999999999999887642 457899999999999999999999999999985 3689999999999999
Q ss_pred eeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH
Q 020314 115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV 193 (327)
Q Consensus 115 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~ 193 (327)
+++|+++++.+++.+++++.++|+++.+..++ ++|++|+|+|++|++|++++++++.+|+++++++++ ++.+.+
T Consensus 75 ~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 149 (293)
T cd05195 75 VKIPDSLSFEEAATLPVAYLTAYYALVDLARL-----QKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFL 149 (293)
T ss_pred EeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc-----CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999777777 899999999999999999999999999999988865 677777
Q ss_pred HhcC--CCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchh-----HHHHhhhhcc
Q 020314 194 KSLG--ADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRV-----LLTFAWKKLT 264 (327)
Q Consensus 194 ~~lg--~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~ 264 (327)
+.++ ++.+++....+ ..+.+.+.++++|+++|++|+..+..++++++++|+++.+|..... ........+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~ 229 (293)
T cd05195 150 RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFLRNVS 229 (293)
T ss_pred HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhccCCe
Confidence 7777 67777765433 2334445567899999999988888999999999999998854321 1111112233
Q ss_pred ccceeeEEEEeC---CCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 265 FSKKQLVPFSVS---PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 265 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
++...+..+... ...+.+..++++++++++++.....+++++++++++.+..++..||+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 230 FSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred EEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 333322221111 1134678888999999998888888999999999999999888888764
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=100.00 E-value=1.9e-31 Score=231.21 Aligned_cols=275 Identities=27% Similarity=0.382 Sum_probs=219.1
Q ss_pred EEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCC
Q 020314 39 LKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARP 118 (327)
Q Consensus 39 V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip 118 (327)
||+.++++|+.|++...|.++ .|.++|||++|+|+++|++++.+++||+|+++ ..|+|++|+.++.+.++++|
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~------~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~-~~g~~~~~~~~~~~~~~~~p 74 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP------GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL-APGSFATYVRTDARLVVPIP 74 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC------CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE-cCCceeeEEEccHHHeEECC
Confidence 899999999999999887642 35789999999999999999999999999985 35899999999999999999
Q ss_pred CCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcC
Q 020314 119 QEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLG 197 (327)
Q Consensus 119 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg 197 (327)
+++++.+++.+++++.++|+++.+...+ .++++|+|+|++|.+|++++++++..|++|+++++ +++.+.++++|
T Consensus 75 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g 149 (288)
T smart00829 75 DGLSFEEAATVPVVFLTAYYALVDLARL-----RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELG 149 (288)
T ss_pred CCCCHHHHHhchHHHHHHHHHHHHHhCC-----CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC
Confidence 9999999999999999999998777777 89999999999999999999999999999999884 46788888999
Q ss_pred C--CEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCch---hHHH--Hhhhhccccce
Q 020314 198 A--DEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPR---VLLT--FAWKKLTFSKK 268 (327)
Q Consensus 198 ~--~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~--~~~~~~~~~~~ 268 (327)
+ +.++++...+ ..+.....++++|+++|++++..+..++++++++|+++.+|.... .... ...+.+.++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T smart00829 150 IPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVSYHAV 229 (288)
T ss_pred CChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCceEEEE
Confidence 8 6777765544 223344555679999999997778889999999999999985431 1111 01122222222
Q ss_pred eeEEEEeCC--CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 269 QLVPFSVSP--KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 269 ~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
.+......+ ..+.+..++++++.+++.+...+.|++++++++++.+..+...||+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 230 DLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred EHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 221111011 124567788999999887666678999999999999999887788764
No 124
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-32 Score=256.34 Aligned_cols=293 Identities=22% Similarity=0.275 Sum_probs=245.7
Q ss_pred ccceEEeeccCC---CCCCCeEEEEEeEEeeChhhHHHHhcCCCC-CCCC---CCCeeecccceEEEEecCCCCCCCCCC
Q 020314 19 VAGLKHVEVPVP---TPNKDEALLKVEAASINPIDWKLQKGMLRP-FLPR---KFPFIPASDVAGEVIGLGSEVKNFKVG 91 (327)
Q Consensus 19 ~~~l~~~~~~~~---~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~---~~p~~~G~e~~G~V~~vG~~~~~~~~G 91 (327)
...++|.+.+.. +..++.=+-.|.|+++|..|+.+..|+.++ .+|. ...+.+|-||+|+ .+-|
T Consensus 1426 lsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~G 1495 (2376)
T KOG1202|consen 1426 LSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASG 1495 (2376)
T ss_pred ccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCC
Confidence 566777776654 245666688899999999999999999864 3333 2347899999997 4669
Q ss_pred CEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHH
Q 020314 92 DKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAV 171 (327)
Q Consensus 92 d~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~ 171 (327)
.||+++....++++.+.++.++++.+|++..+++|+..|+.|.|+||||..+++. ++|+++|||+|+|++|++++
T Consensus 1496 rRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~m-----kkGekiLIHaGsGGVGQAAI 1570 (2376)
T KOG1202|consen 1496 RRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQM-----KKGEKILIHAGSGGVGQAAI 1570 (2376)
T ss_pred cEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccc-----cCCcEEEEecCCCchhHHHH
Confidence 9999999889999999999999999999999999999999999999999999988 99999999999999999999
Q ss_pred HHHHhCCCeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccccccccCCCcE
Q 020314 172 QLAKLGNTHVTATCG-ARNIELVK----SLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK 244 (327)
Q Consensus 172 ~la~~~g~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~ 244 (327)
.+|.++|++||.++. .+|++++. ++....+-|+++.++ .++..+.|+|+|+|+|+...+.++.+++||+.+||
T Consensus 1571 aiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GR 1650 (2376)
T KOG1202|consen 1571 AIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGR 1650 (2376)
T ss_pred HHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCe
Confidence 999999999999994 57887664 444556667766664 36677899999999999999999999999999999
Q ss_pred EEeec-----CCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHC----CceeEecceeeccccHHHHHHHHh
Q 020314 245 VIDFN-----PSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE----GKLKTVIDSKHSLSKAEDAWAKSI 315 (327)
Q Consensus 245 ~v~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~l~~~~~~~~~~~~~~~a~~~~~ 315 (327)
+..+| ..+...+...+++.+|+++.+.. ......+.|+++..++++ |..+|+.+++|+-.++++||++|.
T Consensus 1651 FLEIGKfDLSqNspLGMavfLkNvsfHGiLLDs-vmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMa 1729 (2376)
T KOG1202|consen 1651 FLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDS-VMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMA 1729 (2376)
T ss_pred eeeecceecccCCcchhhhhhcccceeeeehhh-hhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHh
Confidence 98887 33445566677777777776655 334566777877777765 457899999999999999999999
Q ss_pred cCCCCccEEEeC
Q 020314 316 SGRATGKIIVEP 327 (327)
Q Consensus 316 ~~~~~gkvvv~~ 327 (327)
+|++.||||+++
T Consensus 1730 sGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1730 SGKHIGKVVIKV 1741 (2376)
T ss_pred ccCccceEEEEE
Confidence 999999999863
No 125
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.97 E-value=1.6e-30 Score=223.61 Aligned_cols=243 Identities=31% Similarity=0.408 Sum_probs=197.0
Q ss_pred eEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc-----------------
Q 020314 36 EALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL----------------- 98 (327)
Q Consensus 36 eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~----------------- 98 (327)
||+|++.++++|+.|++...|..+ ....+|.++|+|++|+|+++|++++.+++||+|++..
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 78 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG 78 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence 689999999999999999988753 1125678999999999999999999999999999865
Q ss_pred ------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHH
Q 020314 99 ------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ 172 (327)
Q Consensus 99 ------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~ 172 (327)
..|++++|..++.+.++++|+++++++++.++.++.+||+++.....+ +++++|||+|+++ +|+++++
T Consensus 79 ~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~-----~~~~~vli~g~~~-~G~~~~~ 152 (271)
T cd05188 79 GILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVL-----KPGDTVLVLGAGG-VGLLAAQ 152 (271)
T ss_pred CEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCC-----CCCCEEEEECCCH-HHHHHHH
Confidence 268999999999999999999999999999999999999999877776 7899999999766 9999999
Q ss_pred HHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEee
Q 020314 173 LAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 173 la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 248 (327)
+++..|.+|++++++ ++.+.++.+|.+.++++...+. .+. ...++++|+++|++++ .....++++++++|+++.+
T Consensus 153 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~ 231 (271)
T cd05188 153 LAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVV 231 (271)
T ss_pred HHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEE
Confidence 999999999999855 6777888899888887665442 222 4455789999999998 6688899999999999999
Q ss_pred cCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314 249 NPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL 288 (327)
Q Consensus 249 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
+................++..+.+.. .....++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 270 (271)
T cd05188 232 GGTSGGPPLDDLRRLLFKELTIIGST-GGTREDFEEALDL 270 (271)
T ss_pred ccCCCCCCcccHHHHHhcceEEEEee-cCCHHHHHHHHhh
Confidence 86543222212334455666776643 3455567666654
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=3.3e-28 Score=210.22 Aligned_cols=245 Identities=25% Similarity=0.314 Sum_probs=189.2
Q ss_pred CCCCeeecccceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHh
Q 020314 64 RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQS 143 (327)
Q Consensus 64 ~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~ 143 (327)
-.+|.++|||++|+|+++|++++++++||+|+++ +.|++|+.++.+.++++|+++++.+++.+ .++.+||+++. .
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~ 92 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR-D 92 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-h
Confidence 3578999999999999999999999999999985 47999999999999999999999999888 78999999984 6
Q ss_pred hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcC-CCEEEeCCCCCcccccCCCCCcc
Q 020314 144 LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLG-ADEVLDYKTPDGAALKSPSGRKY 220 (327)
Q Consensus 144 ~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg-~~~v~~~~~~~~~~~~~~~~~~~ 220 (327)
.++ +++++++|+| +|.+|++++++|+++|++ |++++++ ++.+.++++| ++.+++..+ ..+.++++
T Consensus 93 ~~~-----~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~ 160 (277)
T cd08255 93 AEP-----RLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA------DEIGGRGA 160 (277)
T ss_pred cCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch------hhhcCCCC
Confidence 777 8999999997 799999999999999998 9888854 6778888898 455443322 11245679
Q ss_pred cEEEeCCCCC-cccccccccCCCcEEEeecCCchhH----HHHhhhhccccceeeEEEEe------CCCHHHHHHHHHHH
Q 020314 221 DAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVL----LTFAWKKLTFSKKQLVPFSV------SPKGENLDFLVKLV 289 (327)
Q Consensus 221 d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 289 (327)
|++||+++.. ....++++++++|+++.+|...... ..+..+.+.+....+..... ....+.++++++++
T Consensus 161 d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (277)
T cd08255 161 DVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL 240 (277)
T ss_pred CEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence 9999998854 4788899999999999998643321 01111111222222111100 01235789999999
Q ss_pred HCCceeEecceeeccccHHHHHHHHhcC-CCCccEEE
Q 020314 290 KEGKLKTVIDSKHSLSKAEDAWAKSISG-RATGKIIV 325 (327)
Q Consensus 290 ~~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv 325 (327)
+++.+++.+.+.|++++++++++.+.++ ....|+++
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 241 AEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred HcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 9999988778899999999999999877 23456653
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.78 E-value=1.9e-18 Score=127.27 Aligned_cols=82 Identities=38% Similarity=0.557 Sum_probs=70.2
Q ss_pred CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc---------------
Q 020314 34 KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL--------------- 98 (327)
Q Consensus 34 ~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~--------------- 98 (327)
|+||+||+.++|||++|++.+.|... ....+|.++|||++|+|+++|+++++|++||||+...
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPP--PPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSS--STSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccc--cCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 68999999999999999999999521 1347899999999999999999999999999998855
Q ss_pred ------------cCcccceeEeecCCceeeC
Q 020314 99 ------------SGGGLAEFAVAKESLTVAR 117 (327)
Q Consensus 99 ------------~~g~~a~~~~~~~~~~~~i 117 (327)
.+|+|+||+.+++++++++
T Consensus 79 ~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred ccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 5799999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.66 E-value=9.3e-17 Score=122.43 Aligned_cols=126 Identities=30% Similarity=0.396 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCC-CCcccccccccC
Q 020314 165 AVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVT-GIPWSTFEPNLG 240 (327)
Q Consensus 165 ~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~ 240 (327)
++|++++|+|++.|++|++++++ +|+++++++|++.++++++.+ ..+.+.++++++|++|||+| ++.++.++++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 80 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR 80 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence 68999999999999999999965 689999999999999998876 34555566679999999999 555999999999
Q ss_pred CCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHC
Q 020314 241 TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE 291 (327)
Q Consensus 241 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (327)
++|+++.+|........++...+.++++++.+ +....+++++++++++++
T Consensus 81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRG-SWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEE-ESSGGHHHHHHHHHHHH-
T ss_pred cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEE-EccCCHHHHHHHHHHhcC
Confidence 99999999987755566677888899999998 445568899999988864
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.58 E-value=4.6e-15 Score=112.56 Aligned_cols=120 Identities=32% Similarity=0.406 Sum_probs=80.0
Q ss_pred cCCCEEEeCCCCCcccccCCCCCcccEEEeCCC--CCcc-cccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEE
Q 020314 196 LGADEVLDYKTPDGAALKSPSGRKYDAVINCVT--GIPW-STFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVP 272 (327)
Q Consensus 196 lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 272 (327)
||++.++|++..+. +..+++|+|||++| ++.+ ..+.++| ++|+++.++. ......... .....+...
T Consensus 1 LGAd~vidy~~~~~-----~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~~~~~~~~~---~~~~~~~~~ 70 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-----AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-DLPSFARRL---KGRSIRYSF 70 (127)
T ss_dssp CT-SEEEETTCSHH-----HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-HHHHHHHHH---HCHHCEEEC
T ss_pred CCcCEEecCCCccc-----cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-cccchhhhh---cccceEEEE
Confidence 69999999985444 44678999999999 5554 7888899 9999999985 111111101 111222222
Q ss_pred EEe-CC---CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314 273 FSV-SP---KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325 (327)
Q Consensus 273 ~~~-~~---~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 325 (327)
+.. .. ..+.++.+.+++.+|+|++.+.++||++++++|++.+++++..||+||
T Consensus 71 ~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 71 LFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 221 11 345699999999999999999999999999999999999999999996
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.35 E-value=6.7e-12 Score=111.99 Aligned_cols=173 Identities=12% Similarity=0.038 Sum_probs=126.2
Q ss_pred HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCcccccC
Q 020314 136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAALKS 214 (327)
Q Consensus 136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~ 214 (327)
.+.++.+..++. .+|++|+|.| .|.+|+.+++.++.+|++|+++. ++.|.+.++.+|++.+ +.. +..
T Consensus 188 ~~~~i~r~t~~~----l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~~~----e~v-- 255 (413)
T cd00401 188 LIDGIKRATDVM----IAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-TME----EAV-- 255 (413)
T ss_pred hHHHHHHhcCCC----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-cHH----HHH--
Confidence 345555554442 5899999999 89999999999999999998877 4578888889998533 211 111
Q ss_pred CCCCcccEEEeCCCCCc-cccc-ccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHH--HHHHHHH
Q 020314 215 PSGRKYDAVINCVTGIP-WSTF-EPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLD--FLVKLVK 290 (327)
Q Consensus 215 ~~~~~~d~v~d~~g~~~-~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 290 (327)
.++|+||+|+|.+. +... ++.++++|+++.+|... ..+....+..+.+++.+.........++ ..+++++
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~---~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa 329 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFD---VEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLA 329 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCC---CccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhh
Confidence 35799999999766 6655 89999999999999652 3344555566676676643322222455 7899999
Q ss_pred CCce---eEeccee-----eccc-cHHHHHHHHhcCCCC-ccEEEe
Q 020314 291 EGKL---KTVIDSK-----HSLS-KAEDAWAKSISGRAT-GKIIVE 326 (327)
Q Consensus 291 ~g~l---~~~~~~~-----~~~~-~~~~a~~~~~~~~~~-gkvvv~ 326 (327)
+|++ .+.+++. ++|+ |+.+++..+.+++.. -|+++.
T Consensus 330 ~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~ 375 (413)
T cd00401 330 EGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL 375 (413)
T ss_pred CcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence 9987 5677777 8999 999999999876542 466654
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.26 E-value=4.8e-11 Score=109.21 Aligned_cols=144 Identities=17% Similarity=0.165 Sum_probs=102.6
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEE-EeCCCCCc--c--cccCC---------
Q 020314 151 SGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEV-LDYKTPDG--A--ALKSP--------- 215 (327)
Q Consensus 151 ~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v-~~~~~~~~--~--~~~~~--------- 215 (327)
..++++|+|.| +|++|+++++.|+.+|++|++++ ++++++.++++|++.+ ++..+.+. . ..+.+
T Consensus 162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 46899999999 79999999999999999999888 5689999999999854 55433210 0 00111
Q ss_pred --C--CCcccEEEeCCCCC------c-ccccccccCCCcEEEeecCCchh--HHHHhhhhccc-cceeeEEEEeCCCHHH
Q 020314 216 --S--GRKYDAVINCVTGI------P-WSTFEPNLGTTGKVIDFNPSPRV--LLTFAWKKLTF-SKKQLVPFSVSPKGEN 281 (327)
Q Consensus 216 --~--~~~~d~v~d~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 281 (327)
. .+++|++|+|++.+ . .+.+++.++++|++++++...+. ........+.. +++++.+.+..+ .+.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P-~~~ 319 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP-SRL 319 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc-hhH
Confidence 1 14799999999953 2 38899999999999999875332 22333344454 778888755333 344
Q ss_pred HHHHHHHHHCCceeE
Q 020314 282 LDFLVKLVKEGKLKT 296 (327)
Q Consensus 282 ~~~~~~~~~~g~l~~ 296 (327)
.+...+++.++.++.
T Consensus 320 p~~As~lla~~~i~l 334 (509)
T PRK09424 320 PTQSSQLYGTNLVNL 334 (509)
T ss_pred HHHHHHHHHhCCccH
Confidence 446888888887653
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.19 E-value=3.7e-06 Score=72.37 Aligned_cols=164 Identities=15% Similarity=0.099 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEec-CCcHHHHHh----cCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT--HVTATCG-ARNIELVKS----LGADEVLDYKTPDGAALKSPSGRKYDAVI 224 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~-~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~d~v~ 224 (327)
+++++||..| +|. |..+.++++..|. +|++++. ++.++.+++ ++.+.+. ....+...+. ...+.||+|+
T Consensus 76 ~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~~~l~-~~~~~fD~Vi 151 (272)
T PRK11873 76 KPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEIEALP-VADNSVDVII 151 (272)
T ss_pred CCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcchhhCC-CCCCceeEEE
Confidence 8999999999 566 8888888887764 6888884 455555543 4443221 1111111111 1234799998
Q ss_pred eCCC-----C--CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHC-Cc--e
Q 020314 225 NCVT-----G--IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE-GK--L 294 (327)
Q Consensus 225 d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~--l 294 (327)
.+.. + ..+..+.+.|+++|+++..+.......... ..+...+..... ......+++.+++++ |- +
T Consensus 152 ~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~e~~~~l~~aGf~~v 226 (272)
T PRK11873 152 SNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEE----IRNDAELYAGCV-AGALQEEEYLAMLAEAGFVDI 226 (272)
T ss_pred EcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHH----HHHhHHHHhccc-cCCCCHHHHHHHHHHCCCCce
Confidence 5432 1 237788899999999988653221111000 001111111000 011123344555555 32 3
Q ss_pred eEecceeeccccHHHHHHHH--hcCCCCccEE
Q 020314 295 KTVIDSKHSLSKAEDAWAKS--ISGRATGKII 324 (327)
Q Consensus 295 ~~~~~~~~~~~~~~~a~~~~--~~~~~~gkvv 324 (327)
.......+++++..++++.+ ..+...++.+
T Consensus 227 ~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 227 TIQPKREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred EEEeccceecccHHHHHHHhccccccccCceE
Confidence 34455678899999999998 5555555554
No 133
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.17 E-value=6e-05 Score=64.75 Aligned_cols=167 Identities=16% Similarity=0.159 Sum_probs=103.3
Q ss_pred eeecccceEEEEecCCCCCCCCCCCEEEEEcc---------------------------CcccceeEeecCCceeeCCCC
Q 020314 68 FIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---------------------------GGGLAEFAVAKESLTVARPQE 120 (327)
Q Consensus 68 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---------------------------~g~~a~~~~~~~~~~~~ip~~ 120 (327)
.+|--.+ ++|++ |++.++.+|.||+++.. .-.|.+|.++..+..+.
T Consensus 32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~---- 104 (314)
T PF11017_consen 32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD---- 104 (314)
T ss_pred ccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC----
Confidence 4454455 68888 89999999999999771 11233333333222221
Q ss_pred CChhh-hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHH-hC-CCeEEEEecCCcHHHHHhcC
Q 020314 121 VSAAE-GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LG-NTHVTATCGARNIELVKSLG 197 (327)
Q Consensus 121 ~~~~~-aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~-~~-g~~v~~~~~~~~~~~~~~lg 197 (327)
-+.+. -+++-..+.|.|. |.+...-. +.-..+.|+|..|++-+++.++.+++ .. +.+++++++....+..+++|
T Consensus 105 ~~~e~~~~LlrPLf~Tsfl-l~d~l~~~--~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg 181 (314)
T PF11017_consen 105 PEREDWQMLLRPLFITSFL-LDDFLFDN--DFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLG 181 (314)
T ss_pred cchhHHHHHHHHHHHHHHH-HHHHhccc--ccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccC
Confidence 01222 3444445566663 33332211 11456789999999999999998888 44 45999999998888999999
Q ss_pred C-CEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCc-EEEeec
Q 020314 198 A-DEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTG-KVIDFN 249 (327)
Q Consensus 198 ~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G-~~v~~g 249 (327)
+ |.++.|++.+. .....--+++|..|+.. ....-++++..= ..+.+|
T Consensus 182 ~Yd~V~~Yd~i~~-----l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG 231 (314)
T PF11017_consen 182 CYDEVLTYDDIDS-----LDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVG 231 (314)
T ss_pred CceEEeehhhhhh-----ccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEE
Confidence 7 67887766431 11133468899999866 444445554432 344555
No 134
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.11 E-value=5.6e-06 Score=76.14 Aligned_cols=101 Identities=19% Similarity=0.217 Sum_probs=74.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEE-eCCCCC------c---------ccccC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVL-DYKTPD------G---------AALKS 214 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~-~~~~~~------~---------~~~~~ 214 (327)
.++.+|+|.| .|.+|++++++++.+|++|++.+ +.++++.++.+|++.+. +..+.. . ...+.
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 4678999999 79999999999999999988887 45788899999988643 221100 0 00000
Q ss_pred C--CCCcccEEEeCC---CC--C--cccccccccCCCcEEEeecCCch
Q 020314 215 P--SGRKYDAVINCV---TG--I--PWSTFEPNLGTTGKVIDFNPSPR 253 (327)
Q Consensus 215 ~--~~~~~d~v~d~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~ 253 (327)
. ..+++|++|+|+ |. + ..+..++.+++++.+|+++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 1 125699999999 53 2 25677899999999999975543
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.02 E-value=2.7e-05 Score=67.51 Aligned_cols=94 Identities=15% Similarity=0.245 Sum_probs=70.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP 231 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 231 (327)
.+.+++|.| .|.+|+.+++.++.+|++|++..+. ++.+.++.+|...+ ...+. .+.+ ..+|+||++++...
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~~~l-~~~l-----~~aDiVI~t~p~~~ 222 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HLSEL-AEEV-----GKIDIIFNTIPALV 222 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cHHHH-HHHh-----CCCCEEEECCChhh
Confidence 688999999 7999999999999999999988855 56677778886543 21110 1111 35899999987554
Q ss_pred -ccccccccCCCcEEEeecCCchh
Q 020314 232 -WSTFEPNLGTTGKVIDFNPSPRV 254 (327)
Q Consensus 232 -~~~~~~~l~~~G~~v~~g~~~~~ 254 (327)
....++.+++++.+++++..++.
T Consensus 223 i~~~~l~~~~~g~vIIDla~~pgg 246 (296)
T PRK08306 223 LTKEVLSKMPPEALIIDLASKPGG 246 (296)
T ss_pred hhHHHHHcCCCCcEEEEEccCCCC
Confidence 45667789999999999876543
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.02 E-value=2.4e-05 Score=70.64 Aligned_cols=103 Identities=12% Similarity=0.011 Sum_probs=74.4
Q ss_pred HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCccccc
Q 020314 135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALK 213 (327)
Q Consensus 135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~ 213 (327)
..|+++.+..++. -.|++|+|.| .|.+|..+++.++.+|++|+++..+ .+...+...|+. +.+. .+..
T Consensus 197 s~~~ai~rat~~~----l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~l----~eal- 265 (425)
T PRK05476 197 SLLDGIKRATNVL----IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMTM----EEAA- 265 (425)
T ss_pred hhHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecCH----HHHH-
Confidence 3456665443441 3899999999 7999999999999999999888744 455455555654 2211 1111
Q ss_pred CCCCCcccEEEeCCCCCc-cc-ccccccCCCcEEEeecCCc
Q 020314 214 SPSGRKYDAVINCVTGIP-WS-TFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 214 ~~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 252 (327)
.++|++++++|... +. ..+..+++++.++.+|...
T Consensus 266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 35899999999765 54 6788999999999998654
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.89 E-value=6.2e-05 Score=67.55 Aligned_cols=102 Identities=13% Similarity=0.019 Sum_probs=73.6
Q ss_pred HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCcccccC
Q 020314 136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAALKS 214 (327)
Q Consensus 136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~ 214 (327)
++.++.+..++. ..|++|+|.| .|.+|..+++.++.+|++|+++. ++.+...+...|+. +.+. .+..
T Consensus 181 ~~~~i~r~t~~~----l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~l----eeal-- 248 (406)
T TIGR00936 181 TIDGILRATNLL----IAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMTM----EEAA-- 248 (406)
T ss_pred HHHHHHHhcCCC----CCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCCH----HHHH--
Confidence 344554443331 5899999999 89999999999999999999887 44555555666653 2221 1111
Q ss_pred CCCCcccEEEeCCCCCc-cc-ccccccCCCcEEEeecCCc
Q 020314 215 PSGRKYDAVINCVTGIP-WS-TFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 215 ~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 252 (327)
.+.|++|+++|... +. ..+..+++++.++.+|...
T Consensus 249 ---~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 ---KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred ---hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 34799999999766 54 4888999999999998654
No 138
>PLN02494 adenosylhomocysteinase
Probab=97.70 E-value=0.00015 Score=65.80 Aligned_cols=100 Identities=14% Similarity=0.035 Sum_probs=74.5
Q ss_pred HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCC
Q 020314 137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSP 215 (327)
Q Consensus 137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~ 215 (327)
+.++.+..++. -.|++|+|.| .|.+|..+++.++.+|++|+++..+ .+...+...|... ++. .+.+
T Consensus 241 ~d~i~r~t~i~----LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~v-v~l----eEal--- 307 (477)
T PLN02494 241 PDGLMRATDVM----IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQV-LTL----EDVV--- 307 (477)
T ss_pred HHHHHHhcCCc----cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCee-ccH----HHHH---
Confidence 55665554442 4799999999 8999999999999999999888754 4555566666642 211 1112
Q ss_pred CCCcccEEEeCCCCCc--ccccccccCCCcEEEeecCC
Q 020314 216 SGRKYDAVINCVTGIP--WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 216 ~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~ 251 (327)
...|++++++|... ....++.+++++.++.+|..
T Consensus 308 --~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 308 --SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred --hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 24799999999765 37899999999999999974
No 139
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.67 E-value=0.00022 Score=67.98 Aligned_cols=94 Identities=18% Similarity=0.170 Sum_probs=64.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC----------------------CcHHHHHhcCCCEEEeCCC-CC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA----------------------RNIELVKSLGADEVLDYKT-PD 208 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~----------------------~~~~~~~~lg~~~v~~~~~-~~ 208 (327)
++|++|+|.| +|++|+++++.++..|++|+++... .+++.++++|.+..++... .+
T Consensus 135 ~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~ 213 (564)
T PRK12771 135 DTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED 213 (564)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence 6899999999 7999999999999999998887631 2345677899877665432 22
Q ss_pred cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEee
Q 020314 209 GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 209 ~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~ 248 (327)
... ... ..++|++|+++|... ....+......|.+..+
T Consensus 214 ~~~-~~~-~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~ 252 (564)
T PRK12771 214 ITL-EQL-EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV 252 (564)
T ss_pred CCH-HHH-HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence 111 111 135999999999754 44455555555555433
No 140
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.58 E-value=0.00081 Score=54.28 Aligned_cols=112 Identities=20% Similarity=0.206 Sum_probs=76.2
Q ss_pred hhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc-----HHHHHhcCCC
Q 020314 125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN-----IELVKSLGAD 199 (327)
Q Consensus 125 ~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~-----~~~~~~lg~~ 199 (327)
..-.+..+.+.|. .+ +...+ +++++||-.| +|.|+.++-+++..| +|+.+.+.+. ++.++.+|..
T Consensus 51 ~gqtis~P~~vA~-m~-~~L~~-----~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~ 120 (209)
T COG2518 51 CGQTISAPHMVAR-ML-QLLEL-----KPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYE 120 (209)
T ss_pred CCceecCcHHHHH-HH-HHhCC-----CCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCC
Confidence 3344444444444 22 55666 8999999998 578999999999888 9998886432 3456788886
Q ss_pred EEEeCCCCCcccccCCCCCcccEEEeCCCCCcc-cccccccCCCcEEEee
Q 020314 200 EVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW-STFEPNLGTTGKVIDF 248 (327)
Q Consensus 200 ~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~ 248 (327)
.+.....+... .......||.|+-+.+.+.+ ...++.|+++|+++.-
T Consensus 121 nV~v~~gDG~~--G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 121 NVTVRHGDGSK--GWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred ceEEEECCccc--CCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence 65433332221 12233579999988876664 5778999999999764
No 141
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.52 E-value=0.0008 Score=57.08 Aligned_cols=141 Identities=18% Similarity=0.202 Sum_probs=85.0
Q ss_pred CCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314 86 KNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA 165 (327)
Q Consensus 86 ~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~ 165 (327)
+.+.+||+++..+ +|.++.. +...++.+++++++-.+. .+... .....+... . .++++||-.| +|.
T Consensus 65 ~p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~-~~l~~l~~~--~-----~~~~~VLDiG-cGs 130 (250)
T PRK00517 65 HPIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTTR-LCLEALEKL--V-----LPGKTVLDVG-CGS 130 (250)
T ss_pred CCEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHHH-HHHHHHHhh--c-----CCCCEEEEeC-CcH
Confidence 3477898887754 5666644 677889999888776544 22111 122223211 2 6788999999 555
Q ss_pred HHHHHHHHHHhCCC-eEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc----cccc
Q 020314 166 VGLYAVQLAKLGNT-HVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP----WSTF 235 (327)
Q Consensus 166 ~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~ 235 (327)
|..++.+++ .|+ +|++++. +...+.++ ..+....+. .. .+...||+|+.+...+. +..+
T Consensus 131 -G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~-------~~--~~~~~fD~Vvani~~~~~~~l~~~~ 199 (250)
T PRK00517 131 -GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVY-------LP--QGDLKADVIVANILANPLLELAPDL 199 (250)
T ss_pred -HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEE-------Ec--cCCCCcCEEEEcCcHHHHHHHHHHH
Confidence 877776555 566 6998884 44444443 222210010 00 11115999997765432 4567
Q ss_pred ccccCCCcEEEeecCC
Q 020314 236 EPNLGTTGKVIDFNPS 251 (327)
Q Consensus 236 ~~~l~~~G~~v~~g~~ 251 (327)
.+.|+++|+++..|..
T Consensus 200 ~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 200 ARLLKPGGRLILSGIL 215 (250)
T ss_pred HHhcCCCcEEEEEECc
Confidence 7889999999987644
No 142
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.47 E-value=0.00093 Score=60.95 Aligned_cols=101 Identities=11% Similarity=0.010 Sum_probs=72.1
Q ss_pred HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCC
Q 020314 137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSP 215 (327)
Q Consensus 137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~ 215 (327)
+.++.+..+.. -.|++|+|.| .|.+|..+++.++.+|++|+++.+. .+...+...|+.. .+. .+..
T Consensus 241 ~d~~~R~~~~~----LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~-~~l----eell--- 307 (476)
T PTZ00075 241 IDGIFRATDVM----IAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQV-VTL----EDVV--- 307 (476)
T ss_pred HHHHHHhcCCC----cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCcee-ccH----HHHH---
Confidence 35554554442 4899999999 7999999999999999998887644 3433344455432 111 1111
Q ss_pred CCCcccEEEeCCCCCc-cc-ccccccCCCcEEEeecCCc
Q 020314 216 SGRKYDAVINCVTGIP-WS-TFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 216 ~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 252 (327)
+..|+|+.++|... +. ..++.+++++.++.+|...
T Consensus 308 --~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 308 --ETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred --hcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 35899999998655 54 7899999999999998764
No 143
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.34 E-value=0.00079 Score=60.40 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=63.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC--
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT-- 228 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-- 228 (327)
++.+|+|.| +|.+|+.+++.++.+|++|+++++. ++.+.+ ..++........+.. ...+.. ..+|++|+|++
T Consensus 166 ~~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~-~l~~~l--~~aDvVI~a~~~~ 241 (370)
T TIGR00518 166 EPGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAY-EIEDAV--KRADLLIGAVLIP 241 (370)
T ss_pred CCceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHH-HHHHHH--ccCCEEEEccccC
Confidence 455699998 6999999999999999998888754 555544 455543222221111 111111 35899999983
Q ss_pred -C--Cc--ccccccccCCCcEEEeecCCch
Q 020314 229 -G--IP--WSTFEPNLGTTGKVIDFNPSPR 253 (327)
Q Consensus 229 -~--~~--~~~~~~~l~~~G~~v~~g~~~~ 253 (327)
. +. ....++.+++++.+++++...+
T Consensus 242 g~~~p~lit~~~l~~mk~g~vIvDva~d~G 271 (370)
T TIGR00518 242 GAKAPKLVSNSLVAQMKPGAVIVDVAIDQG 271 (370)
T ss_pred CCCCCcCcCHHHHhcCCCCCEEEEEecCCC
Confidence 2 22 3567778999999999875443
No 144
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.30 E-value=0.00066 Score=55.88 Aligned_cols=77 Identities=25% Similarity=0.282 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC----EEEeCCCCC--ccccc-CC-CCCcccE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD----EVLDYKTPD--GAALK-SP-SGRKYDA 222 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~----~v~~~~~~~--~~~~~-~~-~~~~~d~ 222 (327)
+++.++|+||++|+|.+.++.+...|++|+.+.|. ++++ ++.+++.. ..+|-.+.. .+.++ .. .-+.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 55789999999999999999999999999999965 6776 45678731 223433332 11111 11 1135999
Q ss_pred EEeCCCC
Q 020314 223 VINCVTG 229 (327)
Q Consensus 223 v~d~~g~ 229 (327)
.+|+.|-
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999984
No 145
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.29 E-value=0.00047 Score=58.14 Aligned_cols=78 Identities=23% Similarity=0.266 Sum_probs=53.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-----EEE--eCCCCC--cccccC--CCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-----EVL--DYKTPD--GAALKS--PSGR 218 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-----~v~--~~~~~~--~~~~~~--~~~~ 218 (327)
..+.+++|+||++|+|...+..+...|++++.+.|+ +|++ +++++.-. .++ |..+.+ ..+... ..+.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 578899999999999999999999999999999976 5654 33333321 132 333333 122221 2334
Q ss_pred cccEEEeCCCC
Q 020314 219 KYDAVINCVTG 229 (327)
Q Consensus 219 ~~d~v~d~~g~ 229 (327)
.+|+.+|+.|-
T Consensus 84 ~IdvLVNNAG~ 94 (265)
T COG0300 84 PIDVLVNNAGF 94 (265)
T ss_pred cccEEEECCCc
Confidence 79999999983
No 146
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.26 E-value=0.0014 Score=56.61 Aligned_cols=94 Identities=14% Similarity=0.210 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP 231 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 231 (327)
.+++++|.| .|.+|.++++.++.+|++|++..++ ++.+.+...|...+ ...+. .+.. ..+|+|+++++...
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~~~~l-~~~l-----~~aDiVint~P~~i 221 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-PLNKL-EEKV-----AEIDIVINTIPALV 221 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-cHHHH-HHHh-----ccCCEEEECCChHH
Confidence 678999999 7999999999999999999888765 44555555554322 11110 1111 35899999997554
Q ss_pred -ccccccccCCCcEEEeecCCchh
Q 020314 232 -WSTFEPNLGTTGKVIDFNPSPRV 254 (327)
Q Consensus 232 -~~~~~~~l~~~G~~v~~g~~~~~ 254 (327)
-...++.++++..+++++..++.
T Consensus 222 i~~~~l~~~k~~aliIDlas~Pg~ 245 (287)
T TIGR02853 222 LTADVLSKLPKHAVIIDLASKPGG 245 (287)
T ss_pred hCHHHHhcCCCCeEEEEeCcCCCC
Confidence 23566778888888998876543
No 147
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.25 E-value=0.0019 Score=49.08 Aligned_cols=92 Identities=20% Similarity=0.196 Sum_probs=58.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcH-HHHHhcCCC--EEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNI-ELVKSLGAD--EVLDYKTPDGAALKSPSGRKYDAVINCV 227 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~-~~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~d~v~d~~ 227 (327)
++.+++|.| +|++|.+++..+...|++ ++.+.|+ +|. ++++.++.. .++..++.. ... ..+|+|++|+
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~-~~~-----~~~DivI~aT 83 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLE-EAL-----QEADIVINAT 83 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHC-HHH-----HTESEEEE-S
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHH-HHH-----hhCCeEEEec
Confidence 788999999 699999999999999995 7776666 443 355666433 233333221 111 3589999999
Q ss_pred CCCcccccccccCCC----cEEEeecCC
Q 020314 228 TGIPWSTFEPNLGTT----GKVIDFNPS 251 (327)
Q Consensus 228 g~~~~~~~~~~l~~~----G~~v~~g~~ 251 (327)
+..........+... +-+++++.+
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 84 PSGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp STTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred CCCCcccCHHHHHHHHhhhhceeccccC
Confidence 866533222333333 577788754
No 148
>PRK08324 short chain dehydrogenase; Validated
Probab=97.00 E-value=0.00084 Score=65.45 Aligned_cols=112 Identities=15% Similarity=0.051 Sum_probs=66.8
Q ss_pred cccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe
Q 020314 101 GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180 (327)
Q Consensus 101 g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~ 180 (327)
-++++|..+++..++.+ +..+.+++... +.... ...+++++||+||+|++|.++++.+...|++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~------------~~~~~---~~l~gk~vLVTGasggIG~~la~~L~~~Ga~ 448 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQ------------RMPKP---KPLAGKVALVTGAAGGIGKATAKRLAAEGAC 448 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhh------------cCCCC---cCCCCCEEEEecCCCHHHHHHHHHHHHCcCE
Confidence 35666776776666666 45555555321 11011 1147889999999999999999999999999
Q ss_pred EEEEecC-CcHH-HHHhcCC--C-EE--EeCCCCC--cccccC--CCCCcccEEEeCCC
Q 020314 181 VTATCGA-RNIE-LVKSLGA--D-EV--LDYKTPD--GAALKS--PSGRKYDAVINCVT 228 (327)
Q Consensus 181 v~~~~~~-~~~~-~~~~lg~--~-~v--~~~~~~~--~~~~~~--~~~~~~d~v~d~~g 228 (327)
|+.++++ ++.+ ..+.++. . .. .|-.+.+ ...++. ...+++|++|++.|
T Consensus 449 Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 449 VVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred EEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9988865 3433 2334443 1 11 2222222 111111 11236999999998
No 149
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.00 E-value=0.0023 Score=53.59 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++|+|+|++|++|..+++.+...|++|+.++++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~ 38 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRN 38 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999999999999999999865
No 150
>PRK12742 oxidoreductase; Provisional
Probab=96.98 E-value=0.0026 Score=53.30 Aligned_cols=75 Identities=20% Similarity=0.206 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHH-HHHhcCCCEE-EeCCCCC--cccccCCCCCcccEEEeC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIE-LVKSLGADEV-LDYKTPD--GAALKSPSGRKYDAVINC 226 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~-~~~~lg~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d~ 226 (327)
+++++||+||+|++|..+++.+...|++|+.+.+. ++.+ +..+++...+ .|..+.. .+..+. .+++|+++++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK--SGALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHH--hCCCcEEEEC
Confidence 57889999999999999999999899998877542 2332 3344554332 2222211 112221 1358999999
Q ss_pred CCC
Q 020314 227 VTG 229 (327)
Q Consensus 227 ~g~ 229 (327)
.|.
T Consensus 83 ag~ 85 (237)
T PRK12742 83 AGI 85 (237)
T ss_pred CCC
Confidence 874
No 151
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.91 E-value=0.0025 Score=50.97 Aligned_cols=77 Identities=18% Similarity=0.134 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCC---EEEeCCCCC--cccccC--CCCCcccEEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGAD---EVLDYKTPD--GAALKS--PSGRKYDAVI 224 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~---~v~~~~~~~--~~~~~~--~~~~~~d~v~ 224 (327)
.|.+|||+||++|+|++.++-...+|-+|+..-+. ++++.++..-.+ .+.|-.+.+ .+..++ ..-...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 57889999999999999999999999999988765 677777644432 233333322 111111 1223479999
Q ss_pred eCCCC
Q 020314 225 NCVTG 229 (327)
Q Consensus 225 d~~g~ 229 (327)
+|.|-
T Consensus 84 NNAGI 88 (245)
T COG3967 84 NNAGI 88 (245)
T ss_pred ecccc
Confidence 99984
No 152
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.90 E-value=0.0014 Score=57.44 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=72.0
Q ss_pred ceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-Cc-
Q 020314 113 LTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RN- 189 (327)
Q Consensus 113 ~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~- 189 (327)
..+++|+.+..+.+.... +.+.++.++...... .+. -++.+|+|.| +|.+|..+++.++..|+ +|+++.++ ++
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~-~~~-l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra 215 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKI-FGN-LKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA 215 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHH-hCC-ccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 567788888888776664 345677776433221 110 2688999999 69999999999998876 66666655 44
Q ss_pred HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcc
Q 020314 190 IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW 232 (327)
Q Consensus 190 ~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 232 (327)
.++++++|.. +++.++. .+.. ..+|+||.|++.+..
T Consensus 216 ~~la~~~g~~-~~~~~~~-~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 216 EELAKELGGN-AVPLDEL-LELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHHcCCe-EEeHHHH-HHHH-----hcCCEEEECCCCCch
Confidence 4677888874 3332211 1111 247999999997654
No 153
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0041 Score=53.59 Aligned_cols=77 Identities=29% Similarity=0.472 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCC--cccccC---CCCCcccEEEe
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPD--GAALKS---PSGRKYDAVIN 225 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~--~~~~~~---~~~~~~d~v~d 225 (327)
.+++++|+||+|++|.+.++.+...|++|++++++ ++.+.+...+...+ .|..+.. ....+. ..++.+|++++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 45689999999999999998888889999998865 45554444444322 2333222 111111 11246899999
Q ss_pred CCCC
Q 020314 226 CVTG 229 (327)
Q Consensus 226 ~~g~ 229 (327)
+.|.
T Consensus 83 ~Ag~ 86 (277)
T PRK05993 83 NGAY 86 (277)
T ss_pred CCCc
Confidence 9873
No 154
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.74 E-value=0.017 Score=44.91 Aligned_cols=103 Identities=13% Similarity=0.045 Sum_probs=65.1
Q ss_pred HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccC
Q 020314 136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKS 214 (327)
Q Consensus 136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~ 214 (327)
.+.++.+..++. -.|++++|.| =|-+|.-.++.++.+|++|+++.. +.+.-.+..-|.. +... .+..
T Consensus 9 ~~d~i~r~t~~~----l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~~~----~~a~-- 76 (162)
T PF00670_consen 9 LVDGIMRATNLM----LAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VMTL----EEAL-- 76 (162)
T ss_dssp HHHHHHHHH-S------TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE-H----HHHT--
T ss_pred HHHHHHhcCcee----eCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ecCH----HHHH--
Confidence 344555555553 5899999999 899999999999999999999984 4444344444443 2211 1111
Q ss_pred CCCCcccEEEeCCCCCc-c-cccccccCCCcEEEeecCCch
Q 020314 215 PSGRKYDAVINCVTGIP-W-STFEPNLGTTGKVIDFNPSPR 253 (327)
Q Consensus 215 ~~~~~~d~v~d~~g~~~-~-~~~~~~l~~~G~~v~~g~~~~ 253 (327)
...|+++.++|... + ..-++.|+++..+..+|....
T Consensus 77 ---~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 77 ---RDADIFVTATGNKDVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp ---TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred ---hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCce
Confidence 34799999999866 3 477889999999998887654
No 155
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.0071 Score=51.14 Aligned_cols=73 Identities=23% Similarity=0.180 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHHHHHhcCCCEEE--eCCCCCcccccCCCCCcccEEEeCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELVKSLGADEVL--DYKTPDGAALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~~~~~lg~~~v~--~~~~~~~~~~~~~~~~~~d~v~d~~g 228 (327)
.+++++|+||+|++|.+.++.+...|++|+.+.+.. +.+.... +....+ |-.+.+ ...... +.+|+++++.|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~-~~~~~~--~~iDilVnnAG 88 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEE-SLDKQL--ASLDVLILNHG 88 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHH-HHHHhc--CCCCEEEECCc
Confidence 567899999999999999998888999999888543 2221111 111222 222211 111112 35999999998
Q ss_pred C
Q 020314 229 G 229 (327)
Q Consensus 229 ~ 229 (327)
.
T Consensus 89 ~ 89 (245)
T PRK12367 89 I 89 (245)
T ss_pred c
Confidence 4
No 156
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.0042 Score=53.36 Aligned_cols=75 Identities=23% Similarity=0.208 Sum_probs=48.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCC--cccccCC--CCCcccEEEeCCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDAVINCVT 228 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~--~~~~~~~--~~~~~d~v~d~~g 228 (327)
+++||+||+|++|...++.+...|++|+++++. ++.+.+...+...+ .|..+.+ .+..+.. ..+++|+++++.|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 469999999999999999988899999998865 44444444444322 3433322 1111111 1246899999998
Q ss_pred C
Q 020314 229 G 229 (327)
Q Consensus 229 ~ 229 (327)
.
T Consensus 82 ~ 82 (274)
T PRK05693 82 Y 82 (274)
T ss_pred C
Confidence 4
No 157
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.0097 Score=49.47 Aligned_cols=75 Identities=23% Similarity=0.244 Sum_probs=48.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEE--eCCCCC--cccccCCCCCcccEEEeCCCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVL--DYKTPD--GAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~--~~~~~~--~~~~~~~~~~~~d~v~d~~g~ 229 (327)
++++|+|++|++|...++.+...|++|++++++ ++.+.++.++....+ |-.+.+ .+..+....+++|+++.+.|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 469999999999999888888889999998864 444444444322222 222221 122232333479999998874
No 158
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.52 E-value=0.017 Score=47.25 Aligned_cols=92 Identities=11% Similarity=-0.025 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 230 (327)
.+.+|||.| +|.+|...++.+...|++|+++.... ....+..-+.-. .......... =.++|+||-+++++
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~-~~~~~~~~~~-----l~~adlViaaT~d~ 81 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIR-WKQKEFEPSD-----IVDAFLVIAATNDP 81 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEE-EEecCCChhh-----cCCceEEEEcCCCH
Confidence 678999999 69999998888888899988876432 222111112111 1111111111 14589999999988
Q ss_pred cccccccccCCCcEEEeecCC
Q 020314 231 PWSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 231 ~~~~~~~~l~~~G~~v~~g~~ 251 (327)
.++..+...+..+.++.....
T Consensus 82 elN~~i~~~a~~~~lvn~~d~ 102 (202)
T PRK06718 82 RVNEQVKEDLPENALFNVITD 102 (202)
T ss_pred HHHHHHHHHHHhCCcEEECCC
Confidence 766555544444566665543
No 159
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.46 E-value=0.0097 Score=54.58 Aligned_cols=145 Identities=14% Similarity=0.162 Sum_probs=89.5
Q ss_pred eeecccceEEEEecCCCCCCCCCCCEEEEEc-----------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314 68 FIPASDVAGEVIGLGSEVKNFKVGDKVVAVL-----------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP 130 (327)
Q Consensus 68 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-----------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~ 130 (327)
..-|+|+++-+.+|+++.+..-+|+.=+..- .++.|++ .+++|+.+..+.+ ...
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~--------a~~~~k~v~~~t~-i~~ 160 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK--------AFSVAKRVRTETG-IGA 160 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHhhHhhhcC-CCC
Confidence 3569999999999999988766666633111 1122222 2445554444333 233
Q ss_pred chHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-Cc-HHHHHhcCCCEEEeCCCC
Q 020314 131 CAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RN-IELVKSLGADEVLDYKTP 207 (327)
Q Consensus 131 ~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~-~~~~~~lg~~~v~~~~~~ 207 (327)
.+..+++.++...... ++ ..++.+|+|.| +|.+|.++++.++..|+ +++++.++ ++ .++++.+|.+ +++..+.
T Consensus 161 ~~~Sv~~~Av~~a~~~-~~-~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~~~ 236 (423)
T PRK00045 161 GAVSVASAAVELAKQI-FG-DLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLDEL 236 (423)
T ss_pred CCcCHHHHHHHHHHHh-hC-CccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHHHH
Confidence 3445667777433221 00 14778999999 79999999999999998 67777655 44 3466777754 3332111
Q ss_pred CcccccCCCCCcccEEEeCCCCCc
Q 020314 208 DGAALKSPSGRKYDAVINCVTGIP 231 (327)
Q Consensus 208 ~~~~~~~~~~~~~d~v~d~~g~~~ 231 (327)
.... .++|+||+|++.+.
T Consensus 237 -~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 237 -PEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred -HHHh-----ccCCEEEECCCCCC
Confidence 1111 35899999999654
No 160
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.46 E-value=0.025 Score=44.19 Aligned_cols=90 Identities=11% Similarity=0.048 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW 232 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 232 (327)
.|.+|+|.| .|.+|.--++.+...|++|+++. ++..+.+..++.-. ..... .+..+=.++|+|+-+++++..
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIs-p~~~~~l~~l~~i~-~~~~~-----~~~~dl~~a~lViaaT~d~e~ 83 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVS-PEICKEMKELPYIT-WKQKT-----FSNDDIKDAHLIYAATNQHAV 83 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEc-CccCHHHHhccCcE-EEecc-----cChhcCCCceEEEECCCCHHH
Confidence 688999999 69999988888888899998774 33333333444211 11111 111112458999999988776
Q ss_pred cccccccCCCcEEEeecC
Q 020314 233 STFEPNLGTTGKVIDFNP 250 (327)
Q Consensus 233 ~~~~~~l~~~G~~v~~g~ 250 (327)
+..+...+..+.++....
T Consensus 84 N~~i~~~a~~~~~vn~~d 101 (157)
T PRK06719 84 NMMVKQAAHDFQWVNVVS 101 (157)
T ss_pred HHHHHHHHHHCCcEEECC
Confidence 655554443344554433
No 161
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.43 E-value=0.0087 Score=54.01 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCcc
Q 020314 132 AGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGA 210 (327)
Q Consensus 132 ~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~ 210 (327)
+....+..+.+..++ +++++||-.|+ |.|..+..+++..|++|++++ +++..+.+++.....-++....+..
T Consensus 151 Aq~~k~~~l~~~l~l-----~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~ 223 (383)
T PRK11705 151 AQEAKLDLICRKLQL-----KPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYR 223 (383)
T ss_pred HHHHHHHHHHHHhCC-----CCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchh
Confidence 344555556566677 89999999993 578888899998899999998 4566666654322111111111111
Q ss_pred cccCCCCCcccEEEeC-----CCCC----cccccccccCCCcEEEee
Q 020314 211 ALKSPSGRKYDAVINC-----VTGI----PWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 211 ~~~~~~~~~~d~v~d~-----~g~~----~~~~~~~~l~~~G~~v~~ 248 (327)
.. .+.+|.|+.. +|.. .+..+.+.|+|+|+++..
T Consensus 224 ---~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~ 266 (383)
T PRK11705 224 ---DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLH 266 (383)
T ss_pred ---hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEE
Confidence 11 2468988743 3322 256777899999999864
No 162
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.40 E-value=0.0064 Score=51.83 Aligned_cols=78 Identities=23% Similarity=0.212 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcH----HHHHhcCCCE-EE----eCCCCC--ccccc--CCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNI----ELVKSLGADE-VL----DYKTPD--GAALK--SPSG 217 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~----~~~~~lg~~~-v~----~~~~~~--~~~~~--~~~~ 217 (327)
-.++.|+|+||++|+|.+.+.-.-..|++++.+++ .+++ +.+++.+... ++ |-.+.+ .+.++ ...-
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 36888999999999999988888888998888874 3444 3444555443 32 212221 11110 0122
Q ss_pred CcccEEEeCCCC
Q 020314 218 RKYDAVINCVTG 229 (327)
Q Consensus 218 ~~~d~v~d~~g~ 229 (327)
+++|+.+|+.|-
T Consensus 90 g~vDvLVNNAG~ 101 (282)
T KOG1205|consen 90 GRVDVLVNNAGI 101 (282)
T ss_pred CCCCEEEecCcc
Confidence 569999999983
No 163
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.0076 Score=53.38 Aligned_cols=77 Identities=19% Similarity=0.264 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cccccC--CCCCcc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GAALKS--PSGRKY 220 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~~~~~--~~~~~~ 220 (327)
+++++||+||++++|.+.++.+...|++|+.++++ ++++ .++..|.+.. + |-.+.+ .+..+. ...+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 57889999999999999999999999999988865 3332 2334555432 2 322221 111110 111469
Q ss_pred cEEEeCCCC
Q 020314 221 DAVINCVTG 229 (327)
Q Consensus 221 d~v~d~~g~ 229 (327)
|++|++.|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999984
No 164
>PRK06182 short chain dehydrogenase; Validated
Probab=96.37 E-value=0.01 Score=50.90 Aligned_cols=77 Identities=23% Similarity=0.269 Sum_probs=49.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCC--cccccC--CCCCcccEEEeC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPD--GAALKS--PSGRKYDAVINC 226 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~--~~~~~~--~~~~~~d~v~d~ 226 (327)
++++++|+|++|++|...++.+...|++|+++++. ++.+.+...+...+ .|-.+.+ .+..+. ....++|+++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 35789999999999999999888889999998865 44443333333322 2333322 111111 112469999999
Q ss_pred CCC
Q 020314 227 VTG 229 (327)
Q Consensus 227 ~g~ 229 (327)
.|.
T Consensus 82 ag~ 84 (273)
T PRK06182 82 AGY 84 (273)
T ss_pred CCc
Confidence 984
No 165
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.32 E-value=0.012 Score=47.03 Aligned_cols=89 Identities=15% Similarity=0.103 Sum_probs=59.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHH-HHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIEL-VKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG- 229 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~- 229 (327)
-.|++|.|+| .|.+|...++.++.+|++|++..+..+... ....+.. ..+. .+.+ ...|+|+.+...
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~~l-~ell-----~~aDiv~~~~plt 102 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE----YVSL-DELL-----AQADIVSLHLPLT 102 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE----ESSH-HHHH-----HH-SEEEE-SSSS
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce----eeeh-hhhc-----chhhhhhhhhccc
Confidence 3789999999 899999999999999999999997655433 4444431 1111 1122 237899887763
Q ss_pred Cc-----ccccccccCCCcEEEeecCC
Q 020314 230 IP-----WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 230 ~~-----~~~~~~~l~~~G~~v~~g~~ 251 (327)
+. -...++.++++..+|.++..
T Consensus 103 ~~T~~li~~~~l~~mk~ga~lvN~aRG 129 (178)
T PF02826_consen 103 PETRGLINAEFLAKMKPGAVLVNVARG 129 (178)
T ss_dssp TTTTTSBSHHHHHTSTTTEEEEESSSG
T ss_pred cccceeeeeeeeeccccceEEEeccch
Confidence 21 22556788888888877654
No 166
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.011 Score=49.75 Aligned_cols=75 Identities=24% Similarity=0.374 Sum_probs=49.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-EeCCCCC--cccccCCCCCcccEEEeCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-LDYKTPD--GAALKSPSGRKYDAVINCV 227 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d~~ 227 (327)
++++++|+|++|++|...++.+...|++|+.+.++ ++.+ ..+..+...+ .|..+.+ ...... ..++|++|++.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence 56789999999999999999999999999888865 3433 3344444322 2332221 111221 24689999999
Q ss_pred CC
Q 020314 228 TG 229 (327)
Q Consensus 228 g~ 229 (327)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 84
No 167
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.28 E-value=0.031 Score=45.72 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=57.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 230 (327)
.|.+|||.| .|.+|..-++.+...|++|++++... ....+...|.-..+. .+.....+ .++|+||-+++.+
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~~~dl-----~~~~lVi~at~d~ 80 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLA-RCFDADIL-----EGAFLVIAATDDE 80 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEe-CCCCHHHh-----CCcEEEEECCCCH
Confidence 577999999 79999999999999999999887542 233222333212221 11111111 3589999999877
Q ss_pred cc-cccccccCCCcEEEeecCC
Q 020314 231 PW-STFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 231 ~~-~~~~~~l~~~G~~v~~g~~ 251 (327)
.+ .......+..|..+.+...
T Consensus 81 ~ln~~i~~~a~~~~ilvn~~d~ 102 (205)
T TIGR01470 81 ELNRRVAHAARARGVPVNVVDD 102 (205)
T ss_pred HHHHHHHHHHHHcCCEEEECCC
Confidence 43 3444455566777765443
No 168
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.014 Score=49.40 Aligned_cols=74 Identities=20% Similarity=0.164 Sum_probs=46.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH----HhcCCC-EE--EeCCCCCcccccCCCCCcccEEEe
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV----KSLGAD-EV--LDYKTPDGAALKSPSGRKYDAVIN 225 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~----~~lg~~-~v--~~~~~~~~~~~~~~~~~~~d~v~d 225 (327)
+.++||+||+|++|..+++.+...|++|+++++. ++.+.+ +..+.. .+ .|..+.. . .......++|++|+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~-~~~~~~~~id~vi~ 79 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAI-D-RAQAAEWDVDVLLN 79 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHH-H-HHHHhcCCCCEEEE
Confidence 3579999999999999999999999999998864 222222 223322 11 2222221 1 11111237999999
Q ss_pred CCCC
Q 020314 226 CVTG 229 (327)
Q Consensus 226 ~~g~ 229 (327)
+.|.
T Consensus 80 ~ag~ 83 (257)
T PRK09291 80 NAGI 83 (257)
T ss_pred CCCc
Confidence 9873
No 169
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.25 E-value=0.0059 Score=44.53 Aligned_cols=90 Identities=16% Similarity=0.174 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHH-hCCCeEEEEe-cCCcHHHHHh----cCC-CEE-EeCCCCCcccccCCCCCcccEEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAK-LGNTHVTATC-GARNIELVKS----LGA-DEV-LDYKTPDGAALKSPSGRKYDAVI 224 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~-~~~~~~~~~~----lg~-~~v-~~~~~~~~~~~~~~~~~~~d~v~ 224 (327)
|+.+||-.| .|.|..++.+++ ..++++++++ +++..+.+++ .+. +.+ +...+ . .........||+|+
T Consensus 1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d--~-~~~~~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGD--A-EFDPDFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC--C-HGGTTTSSCEEEEE
T ss_pred CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc--c-ccCcccCCCCCEEE
Confidence 578899998 456888888888 5788999999 4444444431 122 222 11111 1 11222335699999
Q ss_pred eCC-CCC-c---------ccccccccCCCcEEEe
Q 020314 225 NCV-TGI-P---------WSTFEPNLGTTGKVID 247 (327)
Q Consensus 225 d~~-g~~-~---------~~~~~~~l~~~G~~v~ 247 (327)
... ... . ++.+.+.|+|+|+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 877 321 1 4567779999999875
No 170
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.011 Score=50.21 Aligned_cols=77 Identities=16% Similarity=0.099 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-EeCCCCC--cccccCC--CCCcccEEEe
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDAVIN 225 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~--~~~~~~~--~~~~~d~v~d 225 (327)
++++|+|+||+|++|...++.+...|++|+.+++. .+.+ ....++...+ .|..+.+ ....+.. ...++|++++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57899999999999999999998899999988865 3333 3344443222 2333322 1111110 1135899999
Q ss_pred CCCC
Q 020314 226 CVTG 229 (327)
Q Consensus 226 ~~g~ 229 (327)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8874
No 171
>PRK08017 oxidoreductase; Provisional
Probab=96.20 E-value=0.019 Score=48.64 Aligned_cols=75 Identities=27% Similarity=0.352 Sum_probs=49.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCC--cccc---cCCCCCcccEEEeCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPD--GAAL---KSPSGRKYDAVINCV 227 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~--~~~~---~~~~~~~~d~v~d~~ 227 (327)
++++|+|++|++|.++++.+...|++|+++.++ ++.+.++..+...+ .|..+.+ .... ....+..+|.++.+.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 469999999999999999999889999888864 55665566665433 2332221 1111 111224688999887
Q ss_pred CC
Q 020314 228 TG 229 (327)
Q Consensus 228 g~ 229 (327)
|.
T Consensus 83 g~ 84 (256)
T PRK08017 83 GF 84 (256)
T ss_pred CC
Confidence 73
No 172
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.18 E-value=0.01 Score=55.01 Aligned_cols=78 Identities=18% Similarity=0.215 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---H-HHHHhcCCCEE-EeCCCCC--cccccCC--CCCcccE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---I-ELVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDA 222 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~-~~~~~lg~~~v-~~~~~~~--~~~~~~~--~~~~~d~ 222 (327)
.+++++||+|++|++|...++.+...|++|+.+.++.. . +..++++...+ .|..+.+ ....... ...++|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 36789999999999999999999989999998875422 2 23344554322 2333322 1111111 1136899
Q ss_pred EEeCCCC
Q 020314 223 VINCVTG 229 (327)
Q Consensus 223 v~d~~g~ 229 (327)
+|++.|.
T Consensus 288 vi~~AG~ 294 (450)
T PRK08261 288 VVHNAGI 294 (450)
T ss_pred EEECCCc
Confidence 9999983
No 173
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.17 E-value=0.1 Score=41.21 Aligned_cols=96 Identities=20% Similarity=0.126 Sum_probs=58.7
Q ss_pred cccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh-HHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeC
Q 020314 127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA-VGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDY 204 (327)
Q Consensus 127 a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~-~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~ 204 (327)
...|+....+...+.....- -.+.+|+|.|+ |. +|..++..++..|++|+.+.+.. ++. +
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~-----l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~--~---------- 83 (168)
T cd01080 22 GFIPCTPAGILELLKRYGID-----LAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTKNLK--E---------- 83 (168)
T ss_pred CccCChHHHHHHHHHHcCCC-----CCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCchhHH--H----------
Confidence 44455444445444333211 48899999995 65 69989999998999877666432 111 0
Q ss_pred CCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 205 KTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 205 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.+ ..+|+||.+++.+.+ .-.+.++++-.+++++.+.
T Consensus 84 ------~l-----~~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 84 ------HT-----KQADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred ------HH-----hhCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 01 237888888887652 2223456666667777654
No 174
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=96.16 E-value=0.027 Score=45.92 Aligned_cols=93 Identities=18% Similarity=0.160 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHH----HHhcC-CCEEEeCCCCCcccccCCCCCcccEE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIEL----VKSLG-ADEVLDYKTPDGAALKSPSGRKYDAV 223 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~----~~~lg-~~~v~~~~~~~~~~~~~~~~~~~d~v 223 (327)
.++++|+-.| +|. |..++.+++..+ .+|++++.+ +..+. ++.++ .+.+.....+..+..... ...+|.|
T Consensus 39 ~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~-~~~~D~V 115 (198)
T PRK00377 39 RKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTI-NEKFDRI 115 (198)
T ss_pred CCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhc-CCCCCEE
Confidence 7899999999 555 899999888754 589999854 44443 34555 333221111111111111 2469999
Q ss_pred EeCCCCC----cccccccccCCCcEEEe
Q 020314 224 INCVTGI----PWSTFEPNLGTTGKVID 247 (327)
Q Consensus 224 ~d~~g~~----~~~~~~~~l~~~G~~v~ 247 (327)
|...+.. .+..+.+.|+++|+++.
T Consensus 116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 116 FIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred EECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 9865532 26677789999999875
No 175
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.13 E-value=0.092 Score=42.57 Aligned_cols=96 Identities=16% Similarity=0.100 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhc----CCCEE-EeCCCCCcccccCCCCCcccEEEe
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSL----GADEV-LDYKTPDGAALKSPSGRKYDAVIN 225 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~l----g~~~v-~~~~~~~~~~~~~~~~~~~d~v~d 225 (327)
++.+++|+|++|++|...+..+...|++|+.+.+. ++.+ ..+.+ +.... .+..+. ....+.. .++|+||.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~--~~~diVi~ 103 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDD-AARAAAI--KGADVVFA 103 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCH-HHHHHHH--hcCCEEEE
Confidence 67899999999999998888888888898888755 3332 22323 22211 111111 1111111 35899999
Q ss_pred CCCCCcc--cccccccCCCcEEEeecCC
Q 020314 226 CVTGIPW--STFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 226 ~~g~~~~--~~~~~~l~~~G~~v~~g~~ 251 (327)
+++.... .......+++-.++++..+
T Consensus 104 at~~g~~~~~~~~~~~~~~~vv~D~~~~ 131 (194)
T cd01078 104 AGAAGVELLEKLAWAPKPLAVAADVNAV 131 (194)
T ss_pred CCCCCceechhhhcccCceeEEEEccCC
Confidence 8875542 1222233332245665543
No 176
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.13 E-value=0.018 Score=54.09 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+.|++|||+||+|++|..+++.+...|++|+++++.
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 789999999999999999999888889999998865
No 177
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.13 E-value=0.097 Score=44.92 Aligned_cols=96 Identities=21% Similarity=0.270 Sum_probs=65.9
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~ 206 (327)
..||........+ +..++. -.|++|+|.|.+..+|.-++.++...|++|+...+.. .++ +
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~----l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~--~------------ 197 (286)
T PRK14175 137 FVPCTPLGIMEIL-KHADID----LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA--S------------ 197 (286)
T ss_pred CCCCcHHHHHHHH-HHcCCC----CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH--H------------
Confidence 4565555555555 444442 4899999999777799999999999999998776432 111 0
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|++|.++|.+.+-. -+.++++..+|++|...
T Consensus 198 ----~~-----~~ADIVIsAvg~p~~i~-~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 198 ----YL-----KDADVIVSAVGKPGLVT-KDVVKEGAVIIDVGNTP 233 (286)
T ss_pred ----HH-----hhCCEEEECCCCCcccC-HHHcCCCcEEEEcCCCc
Confidence 00 34799999998775322 25678888888998654
No 178
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.13 E-value=0.018 Score=49.90 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=55.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHH----hcCCC-EEEeCCCCCcccccCCCCCcccEEE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVK----SLGAD-EVLDYKTPDGAALKSPSGRKYDAVI 224 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~ 224 (327)
+++++||-.| +|. |..++.+++ .|+ +|++++.+ ...+.++ ..+.. .+...... . .......||+|+
T Consensus 158 ~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~---~-~~~~~~~fDlVv 230 (288)
T TIGR00406 158 LKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY---L-EQPIEGKADVIV 230 (288)
T ss_pred CCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc---c-ccccCCCceEEE
Confidence 5788999999 455 777777666 465 89999843 4333332 22221 11111110 1 111235799999
Q ss_pred eCCCCC----cccccccccCCCcEEEeecCC
Q 020314 225 NCVTGI----PWSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 225 d~~g~~----~~~~~~~~l~~~G~~v~~g~~ 251 (327)
.+.... .+..+.+.|+++|.++..|..
T Consensus 231 an~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 231 ANILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred EecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 765433 245667899999999877654
No 179
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.025 Score=47.65 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|...++.+...|++|+++.+.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999999888889999888754
No 180
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.12 E-value=0.04 Score=44.48 Aligned_cols=78 Identities=23% Similarity=0.283 Sum_probs=51.7
Q ss_pred CCCeEEEEcC-CChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCC-EEEeCCCCC-----cccccCCCCCcccEE
Q 020314 153 QQKNILITAA-SGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGAD-EVLDYKTPD-----GAALKSPSGRKYDAV 223 (327)
Q Consensus 153 ~~~~vlV~g~-~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~-~v~~~~~~~-----~~~~~~~~~~~~d~v 223 (327)
..+.|||+|+ .||+|.+.+.-....|+.|+++++. ++.+.+ .+.|.. .-+|-+.++ .........+..|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 4566888764 5889999988888899999999965 666544 366643 223333332 112222244679999
Q ss_pred EeCCCCC
Q 020314 224 INCVTGI 230 (327)
Q Consensus 224 ~d~~g~~ 230 (327)
+|+.|.+
T Consensus 86 ~NNAG~~ 92 (289)
T KOG1209|consen 86 YNNAGQS 92 (289)
T ss_pred EcCCCCC
Confidence 9988854
No 181
>PRK06196 oxidoreductase; Provisional
Probab=96.10 E-value=0.015 Score=51.20 Aligned_cols=77 Identities=21% Similarity=0.262 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEE--eCCCCC--cccccC--CCCCcccEEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVL--DYKTPD--GAALKS--PSGRKYDAVI 224 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~--~~~~~~--~~~~~~--~~~~~~d~v~ 224 (327)
.+.+++|+||+|++|.++++.+...|++|+.++++ ++.+ ....+..-..+ |-.+.+ .+.... ....++|+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 56789999999999999998888889999998865 3332 22233211222 222221 111111 1124689999
Q ss_pred eCCCC
Q 020314 225 NCVTG 229 (327)
Q Consensus 225 d~~g~ 229 (327)
++.|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99873
No 182
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.012 Score=51.29 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EE----EeCCCCC--cccccC--CCCCccc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EV----LDYKTPD--GAALKS--PSGRKYD 221 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v----~~~~~~~--~~~~~~--~~~~~~d 221 (327)
+++++||+||+|++|.++++.+...|++|+.+.++ ++.+ ..+.++.. .+ .|-.+.+ ....+. ..-+.+|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 67899999999999999999999999999888865 3433 33445421 11 2322221 111111 0113589
Q ss_pred EEEeCCCC
Q 020314 222 AVINCVTG 229 (327)
Q Consensus 222 ~v~d~~g~ 229 (327)
+++++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999984
No 183
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.017 Score=50.20 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+||+|++|.+.++.+...|++|++++++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 56789999999999999998888889999998865
No 184
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.012 Score=49.88 Aligned_cols=36 Identities=22% Similarity=0.187 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++++|+||+|++|..+++.+...|++|+++.++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~ 42 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR 42 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999999999999999998899999988864
No 185
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.05 E-value=0.017 Score=47.42 Aligned_cols=97 Identities=18% Similarity=0.180 Sum_probs=60.3
Q ss_pred HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCc-----HHHHHhcCCCEEEeCCCCCcccccC
Q 020314 142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGARN-----IELVKSLGADEVLDYKTPDGAALKS 214 (327)
Q Consensus 142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~~~-----~~~~~~lg~~~v~~~~~~~~~~~~~ 214 (327)
+...+ ++|++||-.| +|.|+.++-+++..|- +|+++...+. .+.++.++.+.+.-...+...- .
T Consensus 66 ~~L~l-----~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g--~ 136 (209)
T PF01135_consen 66 EALDL-----KPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEG--W 136 (209)
T ss_dssp HHTTC------TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGT--T
T ss_pred HHHhc-----CCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhc--c
Confidence 55567 8999999998 5678888888887664 6888775432 2344566665432211111111 1
Q ss_pred CCCCcccEEEeCCCCCc-ccccccccCCCcEEEe
Q 020314 215 PSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVID 247 (327)
Q Consensus 215 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~ 247 (327)
.....||.|+-+.+-+. -...++.|+++|++|.
T Consensus 137 ~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~ 170 (209)
T PF01135_consen 137 PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVA 170 (209)
T ss_dssp GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEE
T ss_pred ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEE
Confidence 12346999998877555 4577889999999986
No 186
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.00 E-value=0.044 Score=48.10 Aligned_cols=92 Identities=20% Similarity=0.167 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC-CcHH----HHHhcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA-RNIE----LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVI 224 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~ 224 (327)
+++++||..| +| .|..++.+++..+. +|++++.+ +..+ .++..|.+.+.....+..+... ....+|+|+
T Consensus 79 ~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~--~~~~fD~Ii 154 (322)
T PRK13943 79 DKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVP--EFAPYDVIF 154 (322)
T ss_pred CCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhccc--ccCCccEEE
Confidence 7889999999 44 69999999997763 68888744 3332 3345666544322221111111 114599999
Q ss_pred eCCCCCc-ccccccccCCCcEEEe
Q 020314 225 NCVTGIP-WSTFEPNLGTTGKVID 247 (327)
Q Consensus 225 d~~g~~~-~~~~~~~l~~~G~~v~ 247 (327)
.+.+.+. .....+.|+++|+++.
T Consensus 155 ~~~g~~~ip~~~~~~LkpgG~Lvv 178 (322)
T PRK13943 155 VTVGVDEVPETWFTQLKEGGRVIV 178 (322)
T ss_pred ECCchHHhHHHHHHhcCCCCEEEE
Confidence 8877443 4567789999999876
No 187
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.99 E-value=0.33 Score=42.13 Aligned_cols=51 Identities=27% Similarity=0.341 Sum_probs=44.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec----CCcHHHHHhcCCCEEE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG----ARNIELVKSLGADEVL 202 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~----~~~~~~~~~lg~~~v~ 202 (327)
++|.++||-.-+|.+|...+..|...|++++.+.. .+|...++.+|+.-+.
T Consensus 101 ~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 101 TPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred cCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 89999999999999999999999999999998873 2678888999988654
No 188
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.94 E-value=0.055 Score=46.53 Aligned_cols=147 Identities=16% Similarity=0.177 Sum_probs=83.9
Q ss_pred CCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHH
Q 020314 88 FKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167 (327)
Q Consensus 88 ~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G 167 (327)
.++|+|.+..+ +|.++..-.....+++.+++.+ ......+|++ ++...-+.. +++.+||=+| .|.|
T Consensus 109 ~rig~~f~I~P---sw~~~~~~~~~~~i~lDPGlAF----GTG~HpTT~l-cL~~Le~~~----~~g~~vlDvG--cGSG 174 (300)
T COG2264 109 VRIGERFVIVP---SWREYPEPSDELNIELDPGLAF----GTGTHPTTSL-CLEALEKLL----KKGKTVLDVG--CGSG 174 (300)
T ss_pred EEeeeeEEECC---CCccCCCCCCceEEEEcccccc----CCCCChhHHH-HHHHHHHhh----cCCCEEEEec--CChh
Confidence 67788877744 5555432224556666666533 3444444444 332222221 6899999998 3457
Q ss_pred HHHHHHHHhCCC-eEEEEec-CC----cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc----cccccc
Q 020314 168 LYAVQLAKLGNT-HVTATCG-AR----NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP----WSTFEP 237 (327)
Q Consensus 168 ~~~~~la~~~g~-~v~~~~~-~~----~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~~~ 237 (327)
.+++..++ +|+ ++++++. +- .++.++..+.+... ............++.+|+|+-+.=... ......
T Consensus 175 ILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~--~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~ 251 (300)
T COG2264 175 ILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLV--QAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKR 251 (300)
T ss_pred HHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhh--hcccccchhhcccCcccEEEehhhHHHHHHHHHHHHH
Confidence 77776666 566 7999984 32 23334444433210 001111122223357999998774332 556777
Q ss_pred ccCCCcEEEeecCC
Q 020314 238 NLGTTGKVIDFNPS 251 (327)
Q Consensus 238 ~l~~~G~~v~~g~~ 251 (327)
+++|+|++++.|-.
T Consensus 252 ~lkpgg~lIlSGIl 265 (300)
T COG2264 252 LLKPGGRLILSGIL 265 (300)
T ss_pred HcCCCceEEEEeeh
Confidence 99999999988844
No 189
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.93 E-value=0.11 Score=44.68 Aligned_cols=78 Identities=17% Similarity=0.148 Sum_probs=54.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP 231 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 231 (327)
-+|++|+|.|+++.+|...+.++...|++|+..-+ +..++.+.+ +.+|++++++|.+.
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~---------------------~~aDIvI~AtG~~~ 214 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS-RTQNLPELV---------------------KQADIIVGAVGKPE 214 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh---------------------ccCCEEEEccCCCC
Confidence 48889999996555999999999999996654443 211222211 34899999998555
Q ss_pred ccccccccCCCcEEEeecCCc
Q 020314 232 WSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 232 ~~~~~~~l~~~G~~v~~g~~~ 252 (327)
+ .-.+.++++..++++|...
T Consensus 215 ~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 215 L-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred c-CCHHHcCCCCEEEEEEEee
Confidence 2 2235688888888888553
No 190
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=95.88 E-value=0.095 Score=43.21 Aligned_cols=96 Identities=18% Similarity=0.140 Sum_probs=59.8
Q ss_pred HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHH----HHHhcCCCEE--EeCCCCCcccc
Q 020314 142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIE----LVKSLGADEV--LDYKTPDGAAL 212 (327)
Q Consensus 142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~----~~~~lg~~~v--~~~~~~~~~~~ 212 (327)
...++ +++++||-.| .|.|..+..+++..+ .+|+++... +-.+ .++..|...+ +..+.. ..
T Consensus 70 ~~l~~-----~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~--~~- 139 (212)
T PRK13942 70 ELLDL-----KEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT--LG- 139 (212)
T ss_pred HHcCC-----CCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc--cC-
Confidence 45556 8999999998 456778888888765 589998854 3222 3334554322 211111 11
Q ss_pred cCCCCCcccEEEeCCCC-CcccccccccCCCcEEEee
Q 020314 213 KSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 213 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 248 (327)
......||+|+-.... .......+.|+++|+++..
T Consensus 140 -~~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 140 -YEENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred -CCcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 1123569999755443 3356777899999998764
No 191
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=95.88 E-value=0.027 Score=45.06 Aligned_cols=88 Identities=23% Similarity=0.219 Sum_probs=55.7
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCCCc---
Q 020314 157 ILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTGIP--- 231 (327)
Q Consensus 157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~--- 231 (327)
|+|.||+|.+|..+++.+...|.+|++++++ ++.+. ..+.+ ++..+-.+. .+.+.. .++|.||++.|...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~~~~~~al--~~~d~vi~~~~~~~~~~ 75 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVE-IIQGDLFDPDSVKAAL--KGADAVIHAAGPPPKDV 75 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEE-EEESCTTCHHHHHHHH--TTSSEEEECCHSTTTHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccc-cceeeehhhhhhhhhh--hhcchhhhhhhhhcccc
Confidence 7899999999999999999999999999976 44443 33333 333332222 122222 26999999998422
Q ss_pred --ccccccccCCCc--EEEeec
Q 020314 232 --WSTFEPNLGTTG--KVIDFN 249 (327)
Q Consensus 232 --~~~~~~~l~~~G--~~v~~g 249 (327)
....++.++..| +++.++
T Consensus 76 ~~~~~~~~a~~~~~~~~~v~~s 97 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGVKRVVYLS 97 (183)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEE
T ss_pred cccccccccccccccccceeee
Confidence 334444443333 676655
No 192
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=95.87 E-value=0.0099 Score=50.94 Aligned_cols=98 Identities=20% Similarity=0.281 Sum_probs=56.0
Q ss_pred HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH----HHhcCCC-EE-EeCCCCCc
Q 020314 137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL----VKSLGAD-EV-LDYKTPDG 209 (327)
Q Consensus 137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~----~~~lg~~-~v-~~~~~~~~ 209 (327)
+..+.+.+++ ++|++||-.| +| -|..+..+++..|++|++++.+ +..++ +++.|.. .+ +... +.
T Consensus 51 ~~~~~~~~~l-----~~G~~vLDiG-cG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~--D~ 121 (273)
T PF02353_consen 51 LDLLCEKLGL-----KPGDRVLDIG-CG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ--DY 121 (273)
T ss_dssp HHHHHTTTT-------TT-EEEEES--T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---G
T ss_pred HHHHHHHhCC-----CCCCEEEEeC-CC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe--ec
Confidence 3345567777 9999999999 44 7888888999889999999844 44433 3455542 11 1111 11
Q ss_pred ccccCCCCCcccEEEe-----CCCCCc----ccccccccCCCcEEEe
Q 020314 210 AALKSPSGRKYDAVIN-----CVTGIP----WSTFEPNLGTTGKVID 247 (327)
Q Consensus 210 ~~~~~~~~~~~d~v~d-----~~g~~~----~~~~~~~l~~~G~~v~ 247 (327)
. ... ..||.|+. .+|.+. ++.+-+.|+|+|+++.
T Consensus 122 ~---~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~l 164 (273)
T PF02353_consen 122 R---DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVL 164 (273)
T ss_dssp G---G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEE
T ss_pred c---ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEE
Confidence 1 111 26888764 454322 5566679999999974
No 193
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.035 Score=47.11 Aligned_cols=36 Identities=17% Similarity=0.235 Sum_probs=30.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~ 187 (327)
.++++|||+||+|++|.+.++.+... |++|+.++++
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~ 42 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALP 42 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 67889999999999999988776655 5899998864
No 194
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.025 Score=48.31 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|+++++|.+.++.+...|++|+.+.++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999999899999988854
No 195
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.034 Score=46.05 Aligned_cols=75 Identities=25% Similarity=0.308 Sum_probs=47.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCE-EEeCCCCC--cccccCCCCCcccEEEeCCCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADE-VLDYKTPD--GAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~-v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~ 229 (327)
++++|+|++|++|...++.+...|++|+.+++. ++.+.++..+... ..|..+.+ ........+.++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 369999999999999888777789999988854 4444444444321 22322222 111112233469999998875
No 196
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.026 Score=48.13 Aligned_cols=35 Identities=11% Similarity=0.101 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|...++.+...|++|+.++++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999888899999988865
No 197
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.72 E-value=0.054 Score=46.51 Aligned_cols=76 Identities=22% Similarity=0.255 Sum_probs=47.1
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCc----HH-HHHhcCCCEEE--eCCCCC--cccccCC--CCCc
Q 020314 153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGARN----IE-LVKSLGADEVL--DYKTPD--GAALKSP--SGRK 219 (327)
Q Consensus 153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~~~----~~-~~~~lg~~~v~--~~~~~~--~~~~~~~--~~~~ 219 (327)
+++.+||+||++ ++|.+.++.+...|++|+.+.+.++ .+ ..+++|....+ |-.+.+ ...++.. .-+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 578899999886 9999999888889999988775421 12 22344543222 222221 1111110 1136
Q ss_pred ccEEEeCCC
Q 020314 220 YDAVINCVT 228 (327)
Q Consensus 220 ~d~v~d~~g 228 (327)
+|+++++.|
T Consensus 86 iD~lVnnAG 94 (271)
T PRK06505 86 LDFVVHAIG 94 (271)
T ss_pred CCEEEECCc
Confidence 899999988
No 198
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.72 E-value=0.028 Score=47.92 Aligned_cols=77 Identities=16% Similarity=0.140 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCC-EEE--eCCCCC--cccccCC--CCCcccEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGAD-EVL--DYKTPD--GAALKSP--SGRKYDAV 223 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~-~v~--~~~~~~--~~~~~~~--~~~~~d~v 223 (327)
++++++|+||+|++|...++.+...|++|+.+.+. ++.+.+. ..+.. ..+ |..+.+ .+.++.. .-+.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 57889999999999999998888899999988764 3333332 23322 112 222211 1111110 11358999
Q ss_pred EeCCCC
Q 020314 224 INCVTG 229 (327)
Q Consensus 224 ~d~~g~ 229 (327)
+++.|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999873
No 199
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.027 Score=47.74 Aligned_cols=35 Identities=23% Similarity=0.189 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|+++++|.+.++.+...|++|+.+.++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARH 42 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 57889999999999999999988899999988854
No 200
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.03 Score=47.59 Aligned_cols=36 Identities=11% Similarity=0.080 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++.++||+||+|++|..+++.+...|++|+.+.++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999999999988899999888865
No 201
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.65 E-value=0.035 Score=51.98 Aligned_cols=71 Identities=11% Similarity=0.053 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 230 (327)
.++++|+|.| .|..|++++++++..|++|++.+.. .+.+.++++|...+ .... ....+ ..+|+|+.+.|-+
T Consensus 10 ~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~-~~~~l-----~~~D~VV~SpGi~ 81 (488)
T PRK03369 10 LPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATV-STSD-AVQQI-----ADYALVVTSPGFR 81 (488)
T ss_pred cCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEE-cCcc-hHhHh-----hcCCEEEECCCCC
Confidence 6788999999 8999999999999999999997743 44445666776432 2111 11111 2479999999854
No 202
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.64 E-value=0.031 Score=51.84 Aligned_cols=79 Identities=11% Similarity=0.022 Sum_probs=53.8
Q ss_pred CCCCeEE----EEcCCChHHHHHHHHHHhCCCeEEEEecCCc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314 152 GQQKNIL----ITAASGAVGLYAVQLAKLGNTHVTATCGARN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINC 226 (327)
Q Consensus 152 ~~~~~vl----V~g~~g~~G~~~~~la~~~g~~v~~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 226 (327)
++|+++| ++||+|++|.+++++++..|++|+++.+..+ ....+..+.+. +++|.
T Consensus 32 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~---------------------~~~d~ 90 (450)
T PRK08261 32 RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGA---------------------LVFDA 90 (450)
T ss_pred CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccE---------------------EEEEC
Confidence 7888888 8999999999999999999999998875432 21111122221 33444
Q ss_pred CCCC----------cccccccccCCCcEEEeecCC
Q 020314 227 VTGI----------PWSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 227 ~g~~----------~~~~~~~~l~~~G~~v~~g~~ 251 (327)
.+-. .+...++.|.++|+++.++..
T Consensus 91 ~~~~~~~~l~~~~~~~~~~l~~l~~~griv~i~s~ 125 (450)
T PRK08261 91 TGITDPADLKALYEFFHPVLRSLAPCGRVVVLGRP 125 (450)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhccCCCEEEEEccc
Confidence 3321 234566788889999988754
No 203
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.033 Score=47.45 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.++||+||+|++|...++.+...|++|++++++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 46789999999999999998888889999998865
No 204
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.62 E-value=0.2 Score=42.99 Aligned_cols=91 Identities=13% Similarity=0.089 Sum_probs=55.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH-HHHHhcC---CCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI-ELVKSLG---ADEVLDYKTPDGAALKSPSGRKYDAVINC 226 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~-~~~~~lg---~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 226 (327)
.++++++|.| +|++|.+++..+...|+++++..++ ++. ++++.+. ........+ ..-..+|+|++|
T Consensus 115 ~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~--------~~~~~~DivIna 185 (270)
T TIGR00507 115 RPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE--------LPLHRVDLIINA 185 (270)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh--------hcccCccEEEEC
Confidence 4578899999 5899999988888889888877755 333 3334332 212221111 011358999999
Q ss_pred CCCCc---cc---ccccccCCCcEEEeecCC
Q 020314 227 VTGIP---WS---TFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 227 ~g~~~---~~---~~~~~l~~~G~~v~~g~~ 251 (327)
++... .. .....++++..++++...
T Consensus 186 tp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~ 216 (270)
T TIGR00507 186 TSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN 216 (270)
T ss_pred CCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 98542 11 123456677777777544
No 205
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.037 Score=47.65 Aligned_cols=77 Identities=19% Similarity=0.093 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHh-cCCC-EEE--eCCCCC--cccccC--CCCCcccEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKS-LGAD-EVL--DYKTPD--GAALKS--PSGRKYDAV 223 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~-lg~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v 223 (327)
.++++||+||+|++|.+.++.+...|++|++++++ ++.+.+.. .+.. ..+ |..+.+ ...++. ..-+++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 35679999999999999999888889999998865 44433332 2221 111 222221 111110 001358999
Q ss_pred EeCCCC
Q 020314 224 INCVTG 229 (327)
Q Consensus 224 ~d~~g~ 229 (327)
+++.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999985
No 206
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.60 E-value=0.042 Score=46.81 Aligned_cols=77 Identities=12% Similarity=0.124 Sum_probs=48.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCC----cHHHHHhcCCC--EEEeCCCCC-----cccccCCCCCc
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GAR----NIELVKSLGAD--EVLDYKTPD-----GAALKSPSGRK 219 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~----~~~~~~~lg~~--~v~~~~~~~-----~~~~~~~~~~~ 219 (327)
-+|+.|||+||++|+|.+.++-...+|++++..+ +.+ -.+..++.|.. ++.|-++.+ .+..++.. +.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-GD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence 4889999999999999987766666788776665 332 23344554522 233433332 12222222 36
Q ss_pred ccEEEeCCCC
Q 020314 220 YDAVINCVTG 229 (327)
Q Consensus 220 ~d~v~d~~g~ 229 (327)
+|+++|++|-
T Consensus 115 V~ILVNNAGI 124 (300)
T KOG1201|consen 115 VDILVNNAGI 124 (300)
T ss_pred ceEEEecccc
Confidence 9999999984
No 207
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.60 E-value=0.032 Score=47.29 Aligned_cols=77 Identities=16% Similarity=0.083 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---HHHHHhcCCCE-E--EeCCCCC--cccccC--CCCCcccE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---IELVKSLGADE-V--LDYKTPD--GAALKS--PSGRKYDA 222 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~~~~~~lg~~~-v--~~~~~~~--~~~~~~--~~~~~~d~ 222 (327)
+++++||+||++++|.+.++.+...|++|+.+.+.+. .+..+..+... . .|-.+.+ .+.++. ..-+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5788999999999999999988889999988765421 22334444332 1 2222222 111111 01135899
Q ss_pred EEeCCCC
Q 020314 223 VINCVTG 229 (327)
Q Consensus 223 v~d~~g~ 229 (327)
++++.|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999873
No 208
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.034 Score=46.46 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.+++|+||+|++|..+++.+...|++|+++.+.
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~ 39 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARD 39 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC
Confidence 46789999999999999998888789999998864
No 209
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.023 Score=48.38 Aligned_cols=36 Identities=25% Similarity=0.191 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCC-hHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASG-AVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g-~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++++|+||+| ++|.++++.+...|++|+.+++.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~ 51 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIH 51 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCC
Confidence 4678999999986 89999999999999998887754
No 210
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.021 Score=48.30 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
+++++||+||+|++|...++.+...|++|+.+.++.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~ 49 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE 49 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 577899999999999999988888899999888653
No 211
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.57 E-value=0.03 Score=47.76 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCC-EEE--eCCCCC--cccccC--CCCCcccEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGAD-EVL--DYKTPD--GAALKS--PSGRKYDAV 223 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v 223 (327)
+++++||+||++++|...++.+...|++|+.+.++ ++.+.+ ..++.. ..+ |-.+.. ...++. ..-+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 57789999999999999998888899999988865 344333 334322 122 222211 111110 011358999
Q ss_pred EeCCCC
Q 020314 224 INCVTG 229 (327)
Q Consensus 224 ~d~~g~ 229 (327)
+++.|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999883
No 212
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.57 E-value=0.039 Score=46.51 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---HHHHHhcCCC-EEE--eCCCCC--cccccC--CCCCcccE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---IELVKSLGAD-EVL--DYKTPD--GAALKS--PSGRKYDA 222 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~~~~~~lg~~-~v~--~~~~~~--~~~~~~--~~~~~~d~ 222 (327)
+++++||+|++|++|.+.++.+...|++|+.++++.. .+..+.++.. ..+ |..+.+ ...++. ...+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999999888889999998886432 1233344432 122 222221 111111 11135899
Q ss_pred EEeCCCC
Q 020314 223 VINCVTG 229 (327)
Q Consensus 223 v~d~~g~ 229 (327)
++++.|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999874
No 213
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.56 E-value=0.027 Score=47.52 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|..+++.+...|++|+.++++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57789999999999999999988899999888754
No 214
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.55 E-value=0.058 Score=45.92 Aligned_cols=76 Identities=14% Similarity=0.174 Sum_probs=46.6
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCc----HH-HHHhcCCCEEEeCC--CCC--cccccCC--CCCc
Q 020314 153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGARN----IE-LVKSLGADEVLDYK--TPD--GAALKSP--SGRK 219 (327)
Q Consensus 153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~~----~~-~~~~lg~~~v~~~~--~~~--~~~~~~~--~~~~ 219 (327)
+++.+||+||+ +++|.+.++.+...|++|+.+.+.++ .+ ..++++....+..+ +.+ .+.++.. .-+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 67899999988 49999999888889999988875432 12 22344433333222 211 1111110 1135
Q ss_pred ccEEEeCCC
Q 020314 220 YDAVINCVT 228 (327)
Q Consensus 220 ~d~v~d~~g 228 (327)
+|+++++.|
T Consensus 89 ld~lv~nAg 97 (258)
T PRK07533 89 LDFLLHSIA 97 (258)
T ss_pred CCEEEEcCc
Confidence 899999987
No 215
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.051 Score=46.59 Aligned_cols=77 Identities=18% Similarity=0.095 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEE--eCCCCC--cccccCC--CCCcccEEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVL--DYKTPD--GAALKSP--SGRKYDAVI 224 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~--~~~~~~--~~~~~~~--~~~~~d~v~ 224 (327)
.+.++||+||+|++|...++.+...|++|+.+.++ ++.+ ..+.++....+ |..+.+ ...++.. .-+++|+++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46789999999999999998888889998888754 3433 33444422222 322222 1111110 114689999
Q ss_pred eCCCC
Q 020314 225 NCVTG 229 (327)
Q Consensus 225 d~~g~ 229 (327)
++.|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99884
No 216
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.51 E-value=0.054 Score=46.39 Aligned_cols=77 Identities=18% Similarity=0.236 Sum_probs=54.6
Q ss_pred CCCCeEEEEcCCChHHHHHH-HHHHhCCCeEEEEecC-CcHH-----HHHhcCCC---EEEeCCCCC---cccccCCCCC
Q 020314 152 GQQKNILITAASGAVGLYAV-QLAKLGNTHVTATCGA-RNIE-----LVKSLGAD---EVLDYKTPD---GAALKSPSGR 218 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~-~la~~~g~~v~~~~~~-~~~~-----~~~~lg~~---~v~~~~~~~---~~~~~~~~~~ 218 (327)
+.|++.+|+||+.++|.+-+ ++|+ .|.+|+.+.|+ +|++ ..++.+.. .++|+...+ .++.+.+.+-
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 46689999999999999755 5555 89999988876 5553 33455532 346766655 2355666777
Q ss_pred cccEEEeCCCC
Q 020314 219 KYDAVINCVTG 229 (327)
Q Consensus 219 ~~d~v~d~~g~ 229 (327)
.+-+.+||+|-
T Consensus 126 ~VgILVNNvG~ 136 (312)
T KOG1014|consen 126 DVGILVNNVGM 136 (312)
T ss_pred ceEEEEecccc
Confidence 78889999983
No 217
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.037 Score=47.33 Aligned_cols=35 Identities=23% Similarity=0.203 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+||+|++|...++.+...|++|++++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35679999999999999998888889999988864
No 218
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.46 E-value=0.042 Score=49.92 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
..+.+|||+||+|.+|..+++.+...|.+|++++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence 567789999999999999999888889999999864
No 219
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.43 E-value=0.044 Score=45.79 Aligned_cols=76 Identities=21% Similarity=0.215 Sum_probs=47.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-c-HHHHHhcCCCEE-EeCCCCC--cccccCC--CCCcccEEEeC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-N-IELVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDAVINC 226 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~-~~~~~~lg~~~v-~~~~~~~--~~~~~~~--~~~~~d~v~d~ 226 (327)
++++||+|+++++|.+.++.+...|++|+.+.++. + .+.++..+...+ .|..+.+ ...+... .-+++|+++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 35799999999999999998888999999988543 2 233344453221 2222221 1111110 11358999999
Q ss_pred CCC
Q 020314 227 VTG 229 (327)
Q Consensus 227 ~g~ 229 (327)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 220
>PRK06194 hypothetical protein; Provisional
Probab=95.41 E-value=0.039 Score=47.64 Aligned_cols=35 Identities=17% Similarity=0.118 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.++||+||+|++|..+++.+...|++|+.+++.
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999998888889999888854
No 221
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.044 Score=45.74 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|..+++.+...|++|+.+.+.
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~ 40 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRG 40 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCC
Confidence 57889999999999999998888889999988864
No 222
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.048 Score=46.45 Aligned_cols=77 Identities=16% Similarity=0.154 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDAV 223 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~v 223 (327)
++++++|+||++++|.+.++.+...|++|+.++++ ++.+ ..+.++... .+ |..+.+ .+.++. ..-+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 56789999999999999999888899999998865 3333 334544321 22 222221 111111 011358999
Q ss_pred EeCCCC
Q 020314 224 INCVTG 229 (327)
Q Consensus 224 ~d~~g~ 229 (327)
+++.|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 999874
No 223
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.35 E-value=0.17 Score=42.19 Aligned_cols=94 Identities=18% Similarity=0.196 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEe-cCCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATC-GARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVIN 225 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~-~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d 225 (327)
++|++||=+| +|+|-.+..+++..| ++|++++ ++.-++.++ +.+... +.+-..+.+.+- ..+..||++.-
T Consensus 50 ~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP-f~D~sFD~vt~ 125 (238)
T COG2226 50 KPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLP-FPDNSFDAVTI 125 (238)
T ss_pred CCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEechhhCC-CCCCccCEEEe
Confidence 6899999876 678999999999887 4999998 445455443 333222 221111222222 23456888877
Q ss_pred CCCC-------CcccccccccCCCcEEEeec
Q 020314 226 CVTG-------IPWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 226 ~~g~-------~~~~~~~~~l~~~G~~v~~g 249 (327)
+.|- ..+.++.+.|+|+|+++.+.
T Consensus 126 ~fglrnv~d~~~aL~E~~RVlKpgG~~~vle 156 (238)
T COG2226 126 SFGLRNVTDIDKALKEMYRVLKPGGRLLVLE 156 (238)
T ss_pred eehhhcCCCHHHHHHHHHHhhcCCeEEEEEE
Confidence 6662 13778889999999988765
No 224
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.35 E-value=0.12 Score=47.07 Aligned_cols=93 Identities=14% Similarity=0.174 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
.+.+|+|.| +|++|.+++..+...|+ +++.+.++ ++ .++++.++...++.+++. ...+ ..+|+||+|++.
T Consensus 180 ~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l-~~~l-----~~aDiVI~aT~a 252 (414)
T PRK13940 180 SSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSEL-PQLI-----KKADIIIAAVNV 252 (414)
T ss_pred cCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHH-HHHh-----ccCCEEEECcCC
Confidence 678899999 79999999999998997 55555555 34 345566652223322211 1111 248999999997
Q ss_pred CcccccccccCCCc-EEEeecCCc
Q 020314 230 IPWSTFEPNLGTTG-KVIDFNPSP 252 (327)
Q Consensus 230 ~~~~~~~~~l~~~G-~~v~~g~~~ 252 (327)
+..--..+.++... -+++++.+.
T Consensus 253 ~~~vi~~~~~~~~~~~~iDLavPR 276 (414)
T PRK13940 253 LEYIVTCKYVGDKPRVFIDISIPQ 276 (414)
T ss_pred CCeeECHHHhCCCCeEEEEeCCCC
Confidence 65222222232222 356777553
No 225
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.33 E-value=0.046 Score=46.35 Aligned_cols=77 Identities=14% Similarity=0.120 Sum_probs=46.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-C-cHHHHHhcCCCEE-EeCCCCC--cccccC--CCCCcccEEEe
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-R-NIELVKSLGADEV-LDYKTPD--GAALKS--PSGRKYDAVIN 225 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~-~~~~~~~lg~~~v-~~~~~~~--~~~~~~--~~~~~~d~v~d 225 (327)
.+++++|+||+|++|.+.++.+...|++|+.+.+. + ..+.++..+...+ .|-.+.. .+..+. ..-+++|++++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 56889999999999999998888889998877643 2 2233333232211 2222221 111111 01135899999
Q ss_pred CCCC
Q 020314 226 CVTG 229 (327)
Q Consensus 226 ~~g~ 229 (327)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9874
No 226
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.047 Score=45.98 Aligned_cols=77 Identities=23% Similarity=0.213 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDAV 223 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~v 223 (327)
++++++|+||+|++|...++.+...|++|+.++++ ++.+ ..++++... .+ |..+.. ....+. ...+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 56789999999999999999999899999988865 3332 334555432 12 222211 011110 011358999
Q ss_pred EeCCCC
Q 020314 224 INCVTG 229 (327)
Q Consensus 224 ~d~~g~ 229 (327)
+++.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999874
No 227
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.019 Score=48.85 Aligned_cols=37 Identities=22% Similarity=0.221 Sum_probs=32.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
-+++++||+|++|++|...++.+...|++|+.+++..
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~ 43 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR 43 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCCh
Confidence 3678999999999999999988888899999988653
No 228
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.049 Score=48.34 Aligned_cols=77 Identities=18% Similarity=0.206 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE---EeCCCCC--cccccC--CCCCcc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV---LDYKTPD--GAALKS--PSGRKY 220 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v---~~~~~~~--~~~~~~--~~~~~~ 220 (327)
++++++|+||+|++|..+++.+...|++|+.++++ ++.+ .++..|.... .|..+.+ .+..+. ..-+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 56789999999999999999888899999988865 3332 2234454322 2222221 111110 011358
Q ss_pred cEEEeCCCC
Q 020314 221 DAVINCVTG 229 (327)
Q Consensus 221 d~v~d~~g~ 229 (327)
|+++++.|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999984
No 229
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.31 E-value=0.51 Score=36.84 Aligned_cols=97 Identities=21% Similarity=0.240 Sum_probs=56.8
Q ss_pred cccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCC
Q 020314 127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYK 205 (327)
Q Consensus 127 a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~ 205 (327)
...|+.....+..| +..++. -.|++|+|.|.+..+|.-+..++...|+.|+..-+. +..+..-
T Consensus 14 ~~~PcTp~aii~lL-~~~~~~----l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~----------- 77 (160)
T PF02882_consen 14 GFVPCTPLAIIELL-EYYGID----LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT----------- 77 (160)
T ss_dssp SS--HHHHHHHHHH-HHTT-S----TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH-----------
T ss_pred CCcCCCHHHHHHHH-HhcCCC----CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee-----------
Confidence 34454444444455 444542 489999999999999999999999999998875432 2222110
Q ss_pred CCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 206 TPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 206 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
+..|+|+-++|.+.+- -.+.++++..++++|...
T Consensus 78 ------------~~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 78 ------------RRADIVVSAVGKPNLI-KADWIKPGAVVIDVGINY 111 (160)
T ss_dssp ------------TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEE
T ss_pred ------------eeccEEeeeecccccc-ccccccCCcEEEecCCcc
Confidence 2368888888876532 245778888888888654
No 230
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.31 E-value=0.043 Score=46.47 Aligned_cols=77 Identities=19% Similarity=0.138 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---HHHHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---IELVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDA 222 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~~~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~ 222 (327)
+++++||+|+++++|.+.++.+...|++|+.+.+.+. .+.++.++... .+ |-.+.+ ...++. ...+.+|+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5778999999999999999999889999987764322 22233444321 12 222111 111111 11136899
Q ss_pred EEeCCCC
Q 020314 223 VINCVTG 229 (327)
Q Consensus 223 v~d~~g~ 229 (327)
++++.|.
T Consensus 89 li~~Ag~ 95 (253)
T PRK08993 89 LVNNAGL 95 (253)
T ss_pred EEECCCC
Confidence 9999984
No 231
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.052 Score=45.97 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+||++++|...++.+...|++|+.++++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999998888899999998864
No 232
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.28 E-value=0.075 Score=48.68 Aligned_cols=142 Identities=13% Similarity=0.175 Sum_probs=86.0
Q ss_pred eeecccceEEEEecCCCCCCCCCCCEEEEE-----------------ccCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314 68 FIPASDVAGEVIGLGSEVKNFKVGDKVVAV-----------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIP 130 (327)
Q Consensus 68 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~-----------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~ 130 (327)
..-|.|+++.+.+|+++++..-+|+.=+.- ..++.|++++.++. .+.. -..++ .
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~-~t~i~-------~ 158 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRT-ETDIS-------A 158 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhh-hcCCC-------C
Confidence 356889999999999998876666654310 14556777666655 2221 00111 1
Q ss_pred chHHHHHHHHH---HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-Cc-HHHHHhcCCCEEEeC
Q 020314 131 CAGLTAHQALT---QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RN-IELVKSLGADEVLDY 204 (327)
Q Consensus 131 ~~~~ta~~al~---~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~-~~~~~~lg~~~v~~~ 204 (327)
.+...++.++. +..+. .++++|+|+| +|.+|..+++.++..|+ +|+++.++ ++ .++++.++.. .++.
T Consensus 159 ~~vSv~~~Av~la~~~~~~-----l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~ 231 (417)
T TIGR01035 159 GAVSISSAAVELAERIFGS-----LKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF 231 (417)
T ss_pred CCcCHHHHHHHHHHHHhCC-----ccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH
Confidence 11122333321 22222 4788999999 69999999999999995 77777765 44 3466777764 2322
Q ss_pred CCCCcccccCCCCCcccEEEeCCCCCc
Q 020314 205 KTPDGAALKSPSGRKYDAVINCVTGIP 231 (327)
Q Consensus 205 ~~~~~~~~~~~~~~~~d~v~d~~g~~~ 231 (327)
.+. .+.. .++|+||+|++.+.
T Consensus 232 ~~l-~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 232 EDL-EEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred HHH-HHHH-----hhCCEEEECCCCCC
Confidence 211 1111 35899999998654
No 233
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.28 E-value=0.051 Score=46.21 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=28.7
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++||+|+++++|.+.++.+...|++|+.+.++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~ 33 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRN 33 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence 58999999999999998888889999888865
No 234
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.26 E-value=0.29 Score=42.18 Aligned_cols=93 Identities=18% Similarity=0.059 Sum_probs=56.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 228 (327)
..+.+++|.| +|++|.+++..+...|+ +|+++.++ ++.+ +++.++....+.. ..+. .. .-..+|+|++|++
T Consensus 121 ~~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~--~~--~~~~~DivInaTp 194 (278)
T PRK00258 121 LKGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL--QE--ELADFDLIINATS 194 (278)
T ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc--hh--ccccCCEEEECCc
Confidence 3677899999 69999999999999994 88888765 4433 3344432110111 0000 01 1145899999997
Q ss_pred CCcc------cccccccCCCcEEEeecC
Q 020314 229 GIPW------STFEPNLGTTGKVIDFNP 250 (327)
Q Consensus 229 ~~~~------~~~~~~l~~~G~~v~~g~ 250 (327)
.... ......+.+...++++-.
T Consensus 195 ~g~~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 195 AGMSGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 5432 122355667777776654
No 235
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.039 Score=46.68 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++|+|+++++|...++.+...|++|+.+++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4679999999999999999998899999988854
No 236
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.088 Score=43.88 Aligned_cols=35 Identities=17% Similarity=0.026 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+|+++++|.+.+..+...|++|+.+.++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~ 38 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQD 38 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence 57889999999999999888888899999888754
No 237
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.044 Score=46.58 Aligned_cols=35 Identities=17% Similarity=0.078 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+|+++++|.++++.+...|++|+.+++.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999888899999988864
No 238
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.24 E-value=0.042 Score=48.46 Aligned_cols=35 Identities=34% Similarity=0.523 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+||+|++|..+++.+...|++|+.++++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~ 39 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRN 39 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 57789999999999999998888889999998865
No 239
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.22 E-value=0.15 Score=43.48 Aligned_cols=99 Identities=15% Similarity=0.224 Sum_probs=66.9
Q ss_pred HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHH----HHHhcCCC-EE----EeC
Q 020314 135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIE----LVKSLGAD-EV----LDY 204 (327)
Q Consensus 135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~----~~~~lg~~-~v----~~~ 204 (327)
.++..+.+..++ ++|++||=+| + |=|.+++.+|+..|++|++++ +.+..+ .+++.|.. .+ .|+
T Consensus 59 ~k~~~~~~kl~L-----~~G~~lLDiG-C-GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~ 131 (283)
T COG2230 59 AKLDLILEKLGL-----KPGMTLLDIG-C-GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDY 131 (283)
T ss_pred HHHHHHHHhcCC-----CCCCEEEEeC-C-ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccc
Confidence 455566678888 9999999998 3 357889999999999999999 444433 33456655 21 111
Q ss_pred CCCCcccccCCCCCcccEEE-----eCCCCCc----ccccccccCCCcEEEeec
Q 020314 205 KTPDGAALKSPSGRKYDAVI-----NCVTGIP----WSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 205 ~~~~~~~~~~~~~~~~d~v~-----d~~g~~~----~~~~~~~l~~~G~~v~~g 249 (327)
.+ .. +.||-|+ +.+|.+. +..+-++|+++|++++..
T Consensus 132 rd--------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~ 176 (283)
T COG2230 132 RD--------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHS 176 (283)
T ss_pred cc--------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEE
Confidence 11 11 2277665 4666532 566778999999998653
No 240
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.22 E-value=0.14 Score=42.33 Aligned_cols=93 Identities=9% Similarity=-0.002 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
-++.+|||+| .|.++.-=+..+...|++|++++.. +....+...+.-..+. .......+ .++++||-++.+
T Consensus 23 ~~~~~VLVVG-GG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~dl-----~g~~LViaATdD 95 (223)
T PRK05562 23 SNKIKVLIIG-GGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKEFI-----KDKHLIVIATDD 95 (223)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChHHh-----CCCcEEEECCCC
Confidence 3677899999 6999988777888899999988754 3333222233222221 11111111 468999999988
Q ss_pred CcccccccccC-CCcEEEeecCC
Q 020314 230 IPWSTFEPNLG-TTGKVIDFNPS 251 (327)
Q Consensus 230 ~~~~~~~~~l~-~~G~~v~~g~~ 251 (327)
+.++..+...+ ..+.++.....
T Consensus 96 ~~vN~~I~~~a~~~~~lvn~vd~ 118 (223)
T PRK05562 96 EKLNNKIRKHCDRLYKLYIDCSD 118 (223)
T ss_pred HHHHHHHHHHHHHcCCeEEEcCC
Confidence 77665554443 44666655433
No 241
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.20 E-value=0.29 Score=41.94 Aligned_cols=97 Identities=16% Similarity=0.094 Sum_probs=65.6
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTP 207 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~ 207 (327)
..||........| +..++. -.|++|+|.|.+..+|.-++.++...|+.|+..-+. ..++.+.
T Consensus 136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~-t~~l~~~------------ 197 (285)
T PRK14191 136 FVPATPMGVMRLL-KHYHIE----IKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL-TKDLSFY------------ 197 (285)
T ss_pred CCCCcHHHHHHHH-HHhCCC----CCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC-cHHHHHH------------
Confidence 4455554455445 555553 379999999988899999999999999998765322 1111110
Q ss_pred CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+- -.+.++++..++++|...
T Consensus 198 ----~-----~~ADIvV~AvG~p~~i-~~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 198 ----T-----QNADIVCVGVGKPDLI-KASMVKKGAVVVDIGINR 232 (285)
T ss_pred ----H-----HhCCEEEEecCCCCcC-CHHHcCCCcEEEEeeccc
Confidence 0 3478999999877642 245778898999998643
No 242
>PLN02253 xanthoxin dehydrogenase
Probab=95.17 E-value=0.055 Score=46.57 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++||+||+|++|.+.++.+...|++|+.+.+.
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 57789999999999999998888889999988754
No 243
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.16 E-value=0.067 Score=45.42 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|..+++.+...|++|+.+.++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLN 40 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 57889999999999999999888899999988764
No 244
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.061 Score=45.60 Aligned_cols=36 Identities=8% Similarity=0.013 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
-+++++||+||+|++|...++.+...|++++.++++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~ 40 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS 40 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC
Confidence 367789999999999999998888889998888754
No 245
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.14 E-value=0.48 Score=36.12 Aligned_cols=96 Identities=17% Similarity=0.125 Sum_probs=66.7
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..++........+ +..+++ -+|++|+|+|.+..+|.-++.++...|++|+...+. ...+..
T Consensus 7 ~~p~t~~a~~~ll-~~~~~~----~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~------------- 68 (140)
T cd05212 7 FVSPVAKAVKELL-NKEGVR----LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK------------- 68 (140)
T ss_pred ccccHHHHHHHHH-HHcCCC----CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH-------------
Confidence 3444444444444 444553 489999999999999999999999999998877643 222110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+ .-.+.++++-.++++|...
T Consensus 69 -----v-----~~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 69 -----V-----HDADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK 103 (140)
T ss_pred -----H-----hhCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence 0 347899999987642 3356789999999888665
No 246
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.14 E-value=0.076 Score=48.27 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+||+|++|.+.++.+...|++|+++++.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~ 211 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSN 211 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57789999999999999998888889999988854
No 247
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.011 Score=49.45 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
.+++++|+||+|++|...++.+...|.+|+.+.+..
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~ 37 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSA 37 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence 356799999999999999998888999999988653
No 248
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.12 E-value=0.22 Score=41.08 Aligned_cols=98 Identities=17% Similarity=0.127 Sum_probs=58.3
Q ss_pred HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHH----HHHhcCCCEEEeCCCCCcccccC
Q 020314 142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIE----LVKSLGADEVLDYKTPDGAALKS 214 (327)
Q Consensus 142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~~~~~~~ 214 (327)
+..++ +++++||-.| .|.|..+..+++..+ .+|++++.. +-.+ .++.++.+.+.-...+.....
T Consensus 71 ~~l~~-----~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-- 141 (215)
T TIGR00080 71 ELLEL-----KPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-- 141 (215)
T ss_pred HHhCC-----CCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC--
Confidence 44556 7899999998 456777788888765 368888844 3222 334555443211111111111
Q ss_pred CCCCcccEEEeCCCCC-cccccccccCCCcEEEee
Q 020314 215 PSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 215 ~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~ 248 (327)
.....||+|+-+.... ......+.|+++|+++..
T Consensus 142 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 142 EPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred cccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 1124699988544333 355777899999998754
No 249
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.08 E-value=0.099 Score=44.97 Aligned_cols=77 Identities=19% Similarity=0.215 Sum_probs=47.6
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCC----cHH-HHHhcCCCEEE--eCCCCC--cccccCC--CCCc
Q 020314 153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGAR----NIE-LVKSLGADEVL--DYKTPD--GAALKSP--SGRK 219 (327)
Q Consensus 153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~----~~~-~~~~lg~~~v~--~~~~~~--~~~~~~~--~~~~ 219 (327)
.++.+||+||+ +++|.++++.+...|++|+.+.+.+ +.+ ..++++....+ |-.+.+ ....+.. .-+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57889999987 7999999988888999998877543 222 22344533222 322222 1111110 1146
Q ss_pred ccEEEeCCCC
Q 020314 220 YDAVINCVTG 229 (327)
Q Consensus 220 ~d~v~d~~g~ 229 (327)
+|+++++.|.
T Consensus 84 iDilVnnAG~ 93 (274)
T PRK08415 84 IDFIVHSVAF 93 (274)
T ss_pred CCEEEECCcc
Confidence 8999999983
No 250
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.05 E-value=0.074 Score=46.79 Aligned_cols=71 Identities=25% Similarity=0.340 Sum_probs=45.9
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
+|+|+||+|-+|..+++.+...|.+|.+.+++ ++.......+.+.+. |..+.. .+.... .++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~-~l~~al--~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPE-TLPPSF--KGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHH-HHHHHH--CCCCEEEECCCC
Confidence 59999999999999998888889999999865 333333344543322 222211 111111 358999998763
No 251
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.074 Score=45.18 Aligned_cols=75 Identities=25% Similarity=0.247 Sum_probs=46.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcC-CC-EE--EeCCCCC--cccccCC---CCCcccEE
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLG-AD-EV--LDYKTPD--GAALKSP---SGRKYDAV 223 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg-~~-~v--~~~~~~~--~~~~~~~---~~~~~d~v 223 (327)
+++||+||+|++|...++.+...|++|+.+.++ ++.+.+ ..++ .. .. .|-.+.+ .+.+... ..+.+|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 469999999999999998888889999988854 444333 3332 11 12 2322222 1111111 03468999
Q ss_pred EeCCCC
Q 020314 224 INCVTG 229 (327)
Q Consensus 224 ~d~~g~ 229 (327)
+++.|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999984
No 252
>PRK04148 hypothetical protein; Provisional
Probab=95.03 E-value=0.079 Score=39.86 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCC-CCCcccccCCCCCcccEEEeCCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYK-TPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~-~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
.++.++++.| .| .|...+..+...|.+|++++ +++..+.++..+.+.+.+.- +.+.++. +++|+|+..-..
T Consensus 15 ~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y-----~~a~liysirpp 87 (134)
T PRK04148 15 GKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIY-----KNAKLIYSIRPP 87 (134)
T ss_pred ccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHH-----hcCCEEEEeCCC
Confidence 4668899999 67 88766666667899999999 45667777777765544321 1111211 357888877765
Q ss_pred Cc
Q 020314 230 IP 231 (327)
Q Consensus 230 ~~ 231 (327)
+.
T Consensus 88 ~e 89 (134)
T PRK04148 88 RD 89 (134)
T ss_pred HH
Confidence 54
No 253
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.01 E-value=0.044 Score=46.43 Aligned_cols=37 Identities=16% Similarity=0.083 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 152 GQQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 152 ~~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
-.+++++|+||+ +++|.+.++.+...|++|+.+.+++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~ 43 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND 43 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch
Confidence 367899999998 7999999988888999999887653
No 254
>PRK08264 short chain dehydrogenase; Validated
Probab=95.01 E-value=0.065 Score=44.80 Aligned_cols=72 Identities=22% Similarity=0.239 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCC-cHHHHHhcCCC-EEE--eCCCCC--cccccCCCCCcccEEEe
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGAR-NIELVKSLGAD-EVL--DYKTPD--GAALKSPSGRKYDAVIN 225 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~~-~~~~~~~lg~~-~v~--~~~~~~--~~~~~~~~~~~~d~v~d 225 (327)
.+.+++|+||+|++|..+++.+...|+ +|+.+.++. +.+. .+.. ..+ |..+.+ ....+.. ..+|++|.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence 567899999999999999998888999 888888653 3221 2222 122 222211 1122221 34899999
Q ss_pred CCCC
Q 020314 226 CVTG 229 (327)
Q Consensus 226 ~~g~ 229 (327)
+.|.
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 9886
No 255
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.96 E-value=0.055 Score=44.67 Aligned_cols=95 Identities=19% Similarity=0.195 Sum_probs=59.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCC--EEEeCCCCCcccccCCCCCcccEEEe----
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGAD--EVLDYKTPDGAALKSPSGRKYDAVIN---- 225 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~d~v~d---- 225 (327)
+|.+||=.|+.|| ++..-+| ..|++|++++ +++-.+.++.-... --++|.....+.+... ++.||+|++
T Consensus 59 ~g~~vLDvGCGgG--~Lse~mA-r~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~-~~~FDvV~cmEVl 134 (243)
T COG2227 59 PGLRVLDVGCGGG--ILSEPLA-RLGASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASA-GGQFDVVTCMEVL 134 (243)
T ss_pred CCCeEEEecCCcc--HhhHHHH-HCCCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhc-CCCccEEEEhhHH
Confidence 7788999996554 4444444 4689999999 44555555422111 1145554433222222 267999985
Q ss_pred -CCCCCc--ccccccccCCCcEEEeecCC
Q 020314 226 -CVTGIP--WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 226 -~~g~~~--~~~~~~~l~~~G~~v~~g~~ 251 (327)
.+..+. +..+.++++|+|.++.....
T Consensus 135 EHv~dp~~~~~~c~~lvkP~G~lf~STin 163 (243)
T COG2227 135 EHVPDPESFLRACAKLVKPGGILFLSTIN 163 (243)
T ss_pred HccCCHHHHHHHHHHHcCCCcEEEEeccc
Confidence 555444 66788999999999876544
No 256
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.95 E-value=0.11 Score=44.57 Aligned_cols=77 Identities=18% Similarity=0.176 Sum_probs=47.2
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCC----cHH-HHHhcCCCEEE--eCCCCC--cccccC--CCCC
Q 020314 152 GQQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGAR----NIE-LVKSLGADEVL--DYKTPD--GAALKS--PSGR 218 (327)
Q Consensus 152 ~~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~----~~~-~~~~lg~~~v~--~~~~~~--~~~~~~--~~~~ 218 (327)
-.++++||+||+ +++|.+.++.+...|++|+.+.+.+ +.+ +.++++....+ |-.+.. .+..+. ..-+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 467889999986 7999999988888999998776542 222 22344532222 222211 111111 1113
Q ss_pred cccEEEeCCC
Q 020314 219 KYDAVINCVT 228 (327)
Q Consensus 219 ~~d~v~d~~g 228 (327)
.+|+++++.|
T Consensus 88 ~iD~lv~nAG 97 (272)
T PRK08159 88 KLDFVVHAIG 97 (272)
T ss_pred CCcEEEECCc
Confidence 5899999987
No 257
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.065 Score=45.19 Aligned_cols=35 Identities=14% Similarity=0.174 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.+++|+||+|++|...++.+...|++|+.+.+.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 56789999999999999998877789999988865
No 258
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.064 Score=46.91 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+||+|++|..+++.+...|++|+.+++.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999998888889999888864
No 259
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=94.92 E-value=0.16 Score=40.38 Aligned_cols=95 Identities=17% Similarity=0.115 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcHH----HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNIE----LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIN 225 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d 225 (327)
++++.++=+|+ +.|...++++... .++|+++.++ ++.+ .++++|.+.+..-...-.+.+.... .+|.+|=
T Consensus 33 ~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~--~~daiFI 108 (187)
T COG2242 33 RPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP--SPDAIFI 108 (187)
T ss_pred CCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC--CCCEEEE
Confidence 89997777774 4577888888543 4699999965 4443 3457887754333332222222221 4888885
Q ss_pred CCCCC---cccccccccCCCcEEEeecC
Q 020314 226 CVTGI---PWSTFEPNLGTTGKVIDFNP 250 (327)
Q Consensus 226 ~~g~~---~~~~~~~~l~~~G~~v~~g~ 250 (327)
.=|.. .++.++..|+++|++|.-..
T Consensus 109 GGg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 109 GGGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred CCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 44422 28889999999999986543
No 260
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.90 E-value=0.46 Score=40.78 Aligned_cols=95 Identities=20% Similarity=0.178 Sum_probs=66.4
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||.....+..+ +..++. -.|++++|.|.+..+|.-...++...|++|+..-+. ..++.
T Consensus 138 ~~PcTp~av~~ll-~~~~i~----l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~-------------- 198 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGID----TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH-------------- 198 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH--------------
Confidence 3466555555555 455552 379999999988889999999999999988766532 21110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 251 (327)
.. +..|+++.++|.+.+-. .+.++++..++++|..
T Consensus 199 ----~~-----~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin 233 (285)
T PRK10792 199 ----HV-----RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN 233 (285)
T ss_pred ----HH-----hhCCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence 00 34799999999776322 3788899999999854
No 261
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=94.88 E-value=0.11 Score=41.52 Aligned_cols=75 Identities=19% Similarity=0.200 Sum_probs=50.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCC--CE-EEeC---CCCCc----ccccCCCCCccc
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGA--DE-VLDY---KTPDG----AALKSPSGRKYD 221 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~--~~-v~~~---~~~~~----~~~~~~~~~~~d 221 (327)
.+..+|+||++++|.+..+.+...|++|.+.+.+ ...+.++.++. ++ .+.. +..+. +...+.- +..+
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~-g~ps 92 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL-GTPS 92 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc-CCCc
Confidence 4458999999999999999999999999988833 34556677775 22 2221 11121 1111122 2689
Q ss_pred EEEeCCCC
Q 020314 222 AVINCVTG 229 (327)
Q Consensus 222 ~v~d~~g~ 229 (327)
++++|.|-
T Consensus 93 vlVncAGI 100 (256)
T KOG1200|consen 93 VLVNCAGI 100 (256)
T ss_pred EEEEcCcc
Confidence 99999994
No 262
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.076 Score=44.65 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.+++|+|++|++|...+..+...|++++.+.+.
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 57889999999999999999888899999888754
No 263
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.87 E-value=0.31 Score=41.70 Aligned_cols=96 Identities=24% Similarity=0.248 Sum_probs=64.6
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTP 207 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~ 207 (327)
..||........| +..++. -.|++|+|.|.+..+|.=...++...|+.|+ ++.+...++.+.
T Consensus 136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVt-i~hs~T~~l~~~------------ 197 (281)
T PRK14183 136 FVPCTPLGVMELL-EEYEID----VKGKDVCVVGASNIVGKPMAALLLNANATVD-ICHIFTKDLKAH------------ 197 (281)
T ss_pred CCCCcHHHHHHHH-HHcCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEE-EeCCCCcCHHHH------------
Confidence 3455544444444 455553 4899999999999999999999998899887 443321111110
Q ss_pred CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314 208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 251 (327)
. +..|+++-++|.+.+ .-.+.++++..++++|..
T Consensus 198 ----~-----~~ADIvV~AvGkp~~-i~~~~vk~gavvIDvGin 231 (281)
T PRK14183 198 ----T-----KKADIVIVGVGKPNL-ITEDMVKEGAIVIDIGIN 231 (281)
T ss_pred ----H-----hhCCEEEEecCcccc-cCHHHcCCCcEEEEeecc
Confidence 0 347899988887664 335678888888898854
No 264
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.098 Score=44.90 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+||+|++|...++.+...|++|++++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 56789999999999999998888889999988854
No 265
>PRK05717 oxidoreductase; Validated
Probab=94.83 E-value=0.15 Score=43.10 Aligned_cols=78 Identities=17% Similarity=0.139 Sum_probs=48.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-E--EeCCCCC--cccccCC--CCCcccE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-V--LDYKTPD--GAALKSP--SGRKYDA 222 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v--~~~~~~~--~~~~~~~--~~~~~d~ 222 (327)
.++++++|+|++|++|..+++.+...|++|+.+.+. ++.+ ..+.++... . .|-.+.+ ...++.. .-+.+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 467899999999999999998888889999888754 3322 334444321 1 1222211 0111110 1135899
Q ss_pred EEeCCCC
Q 020314 223 VINCVTG 229 (327)
Q Consensus 223 v~d~~g~ 229 (327)
++++.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9999884
No 266
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=94.83 E-value=0.093 Score=43.12 Aligned_cols=94 Identities=19% Similarity=0.160 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHH----HHHhcCCCEEEeCCC-CC-cccccCCCCCcccE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIE----LVKSLGADEVLDYKT-PD-GAALKSPSGRKYDA 222 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~-~~-~~~~~~~~~~~~d~ 222 (327)
++.++||=.| +.+|+.++++|..+. .+++++..+ ++.+ ..++.|.+..+..-. .+ ...+.....+.||+
T Consensus 58 ~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fDl 135 (219)
T COG4122 58 SGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFDL 135 (219)
T ss_pred cCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCccE
Confidence 6778899988 678999999999775 478888754 4433 345777765322211 12 22233233467999
Q ss_pred EE-eCCCCC---cccccccccCCCcEEEe
Q 020314 223 VI-NCVTGI---PWSTFEPNLGTTGKVID 247 (327)
Q Consensus 223 v~-d~~g~~---~~~~~~~~l~~~G~~v~ 247 (327)
|| |+.-.. .++.++++|+++|-+|.
T Consensus 136 iFIDadK~~yp~~le~~~~lLr~GGliv~ 164 (219)
T COG4122 136 VFIDADKADYPEYLERALPLLRPGGLIVA 164 (219)
T ss_pred EEEeCChhhCHHHHHHHHHHhCCCcEEEE
Confidence 96 666532 28899999999998874
No 267
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.81 E-value=0.47 Score=40.76 Aligned_cols=96 Identities=22% Similarity=0.230 Sum_probs=66.1
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|+|.|.+..+|.-.+.++...|++|+...+. ..+.
T Consensus 137 ~~PcTp~aii~lL-~~~~i~----l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~--------------- 196 (285)
T PRK14189 137 FRPCTPYGVMKML-ESIGIP----LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA--------------- 196 (285)
T ss_pred CcCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH---------------
Confidence 3455544445445 455553 489999999988888999999999999998864321 1111
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
+.. +..|+++-++|.+.+-. .+.++++..++++|...
T Consensus 197 ---~~~-----~~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 197 ---AHT-----RQADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR 233 (285)
T ss_pred ---HHh-----hhCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence 001 34789999998665322 27899999999998653
No 268
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.80 E-value=0.094 Score=46.82 Aligned_cols=35 Identities=20% Similarity=0.123 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.+|||+||+|.+|..+++.+...|.+|+++.+.
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~ 37 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD 37 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999998889999988754
No 269
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.79 E-value=0.08 Score=44.57 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+||+|++|...++.+...|++|+.++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 46789999999999999999888899999888754
No 270
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=94.78 E-value=0.53 Score=36.39 Aligned_cols=93 Identities=15% Similarity=0.055 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcH-HHHHhcCCCE-EEeCCCCCcccccCCCCCcccEEEeCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNI-ELVKSLGADE-VLDYKTPDGAALKSPSGRKYDAVINCV 227 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~-~~~~~lg~~~-v~~~~~~~~~~~~~~~~~~~d~v~d~~ 227 (327)
.++.+++|.| .|.+|...++.+...| .++++..++ ++. +.++.++... ..+..+. .+. -.++|+|+.|+
T Consensus 17 ~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~Dvvi~~~ 89 (155)
T cd01065 17 LKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL-EEL-----LAEADLIINTT 89 (155)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch-hhc-----cccCCEEEeCc
Confidence 3578899999 5999999998888876 567777654 333 3445555421 0111111 111 24689999999
Q ss_pred CCCcc-----cccccccCCCcEEEeecCC
Q 020314 228 TGIPW-----STFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 228 g~~~~-----~~~~~~l~~~G~~v~~g~~ 251 (327)
+.... ......++++..+++++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 90 PVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 86542 1112345666677776543
No 271
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.77 E-value=0.08 Score=45.49 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+||+|++|.+.++.+...|++|+.+.++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999888899999888864
No 272
>PRK07023 short chain dehydrogenase; Provisional
Probab=94.76 E-value=0.13 Score=43.18 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=29.1
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
++||+||+|++|..+++.+...|++|+.++++.
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~ 35 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSR 35 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCc
Confidence 599999999999999988888899999888653
No 273
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.75 E-value=0.27 Score=42.14 Aligned_cols=64 Identities=14% Similarity=0.159 Sum_probs=42.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 228 (327)
.+++++|.| +||.+.+++..+...|+ +++.+.++ +|.+ +++.++... .. . . ....+|+|+||++
T Consensus 121 ~~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~~---~-~---~~~~~dlvINaTp 187 (272)
T PRK12550 121 PDLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----RP---D-L---GGIEADILVNVTP 187 (272)
T ss_pred CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----hh---h-c---ccccCCEEEECCc
Confidence 456899999 79999999999988998 57777765 3433 444553211 00 0 0 1134899999986
No 274
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=94.73 E-value=0.12 Score=44.31 Aligned_cols=94 Identities=17% Similarity=0.092 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCCCEE-EeCCCCCcccccCCCCC-cccEEEeC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGADEV-LDYKTPDGAALKSPSGR-KYDAVINC 226 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~~~~~~~~~~~-~~d~v~d~ 226 (327)
.++++++|.| +||.+.+++..+...|+ +++++-|+ +|.+ +++.++.... +.... ....... .+|+++|+
T Consensus 124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~-----~~~~~~~~~~dliINa 197 (283)
T COG0169 124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA-----LADLEGLEEADLLINA 197 (283)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc-----ccccccccccCEEEEC
Confidence 4689999999 79999999999999997 67777765 4533 4444442211 00000 0001111 48999999
Q ss_pred CCCCccc------ccccccCCCcEEEeecCC
Q 020314 227 VTGIPWS------TFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 227 ~g~~~~~------~~~~~l~~~G~~v~~g~~ 251 (327)
++-.... ....++++.-.+.++-..
T Consensus 198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~ 228 (283)
T COG0169 198 TPVGMAGPEGDSPVPAELLPKGAIVYDVVYN 228 (283)
T ss_pred CCCCCCCCCCCCCCcHHhcCcCCEEEEeccC
Confidence 9743211 113456666666665433
No 275
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.69 E-value=0.082 Score=44.87 Aligned_cols=37 Identities=14% Similarity=0.114 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN 189 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~ 189 (327)
.++++||+||++++|.+.++.+...|++|+.+.+.++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~ 50 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTN 50 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcH
Confidence 5789999999999999999998889999998886543
No 276
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.098 Score=43.84 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++++|+|++|++|..+++.+...|++|++++++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARS 39 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 456789999999999999999888899999998865
No 277
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.67 E-value=0.096 Score=44.29 Aligned_cols=35 Identities=20% Similarity=0.146 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|...++.+...|++|+.+.+.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLN 37 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999999998888889999998864
No 278
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=94.66 E-value=0.21 Score=40.29 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=55.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEecC-CcHHH----HHhcCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCGA-RNIEL----VKSLGADEVLDYKTPDGAALKSPSGRKYDAVIN 225 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~-~g~~v~~~~~~-~~~~~----~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d 225 (327)
+++.+||-.|+ |.|..++.+++. .+++|++++.+ +..+. ++..+.+.+ .....+...... .+.+|+|+-
T Consensus 44 ~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d~~~~~~--~~~fDlV~~ 118 (187)
T PRK00107 44 PGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGRAEEFGQ--EEKFDVVTS 118 (187)
T ss_pred CCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEeccHhhCCC--CCCccEEEE
Confidence 55888999884 345666666654 46799999854 33333 334554432 111111111111 357999996
Q ss_pred CCCCC---cccccccccCCCcEEEeec
Q 020314 226 CVTGI---PWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 226 ~~g~~---~~~~~~~~l~~~G~~v~~g 249 (327)
..... .+..+.+.|+++|+++.+-
T Consensus 119 ~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 119 RAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred ccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 44322 2667788999999998764
No 279
>PRK06484 short chain dehydrogenase; Validated
Probab=94.64 E-value=0.079 Score=50.11 Aligned_cols=78 Identities=21% Similarity=0.256 Sum_probs=50.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE---EEeCCCCC--cccccCC--CCCcccE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE---VLDYKTPD--GAALKSP--SGRKYDA 222 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~---v~~~~~~~--~~~~~~~--~~~~~d~ 222 (327)
.+++++||+|+++++|.+.++.+...|++|+.+.+. ++.+ ..++++... ..|-.+.+ ...++.. .-+.+|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 467899999999999999999999999999998854 4443 344555432 12322222 1111111 1135899
Q ss_pred EEeCCCC
Q 020314 223 VINCVTG 229 (327)
Q Consensus 223 v~d~~g~ 229 (327)
++++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999874
No 280
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.64 E-value=0.57 Score=40.55 Aligned_cols=95 Identities=21% Similarity=0.193 Sum_probs=64.5
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~ 206 (327)
..||.....+..| +..++. -.|++|+|+|.++.+|.-.+.++...|+.|++.. ++...+.
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~----~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e-------------- 197 (296)
T PRK14188 137 LVPCTPLGCMMLL-RRVHGD----LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPA-------------- 197 (296)
T ss_pred CcCCCHHHHHHHH-HHhCCC----CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHH--------------
Confidence 4565554555445 444442 4899999999999999999999988899888774 3322110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|+|+-++|.+. +... .++++..++++|...
T Consensus 198 ----~~-----~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~ 233 (296)
T PRK14188 198 ----VC-----RRADILVAAVGRPEMVKGD--WIKPGATVIDVGINR 233 (296)
T ss_pred ----HH-----hcCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence 00 23688888888765 3332 388888889988653
No 281
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.052 Score=46.09 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHH----HHHhcCCCEE---EeCCCCC--cccccCC--CCCc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIE----LVKSLGADEV---LDYKTPD--GAALKSP--SGRK 219 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~----~~~~lg~~~v---~~~~~~~--~~~~~~~--~~~~ 219 (327)
++++++|+|++|++|..+++.+...|++ |+.+.+. ++.. .++..+.... .|..+.+ .+.++.. .-++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6788999999999999999999989998 8887754 3322 2233343321 2322221 1111111 0135
Q ss_pred ccEEEeCCCC
Q 020314 220 YDAVINCVTG 229 (327)
Q Consensus 220 ~d~v~d~~g~ 229 (327)
+|.++++.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 282
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.63 E-value=0.12 Score=44.76 Aligned_cols=74 Identities=12% Similarity=0.047 Sum_probs=45.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcH-HHHHhcCCCE-EEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNI-ELVKSLGADE-VLDYKTPDGAALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~-~~~~~lg~~~-v~~~~~~~~~~~~~~~~~~~d~v~d~~g 228 (327)
++++++|.| +|+++.+++..+...|+ +++.+.|+ +|. ++++.++... +...... ....... ..+|+|++|++
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~-~~~~~~~--~~~DiVInaTp 199 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGD-SGGLAIE--KAAEVLVSTVP 199 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccch-hhhhhcc--cCCCEEEECCC
Confidence 578899999 79999999999989998 67776665 443 3445544221 1111100 0000111 35899999997
Q ss_pred CC
Q 020314 229 GI 230 (327)
Q Consensus 229 ~~ 230 (327)
..
T Consensus 200 ~g 201 (282)
T TIGR01809 200 AD 201 (282)
T ss_pred CC
Confidence 43
No 283
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.63 E-value=0.13 Score=43.92 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=29.5
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAA--SGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~--~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++.+||+|| ++++|.+.++.+...|++|+...+.
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVV 41 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 5778999996 6799999998888899999887643
No 284
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.62 E-value=0.16 Score=39.61 Aligned_cols=79 Identities=20% Similarity=0.220 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEeCCCC----C-cccc--cCCCCCcccE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGADEVLDYKTP----D-GAAL--KSPSGRKYDA 222 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~~~~~----~-~~~~--~~~~~~~~d~ 222 (327)
.+|-..||+|+++++|.+++.-+...|+.++..+-+ .-.+.++++|-.-++...+. + ...+ .+..-+..|+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 466678999999999999999988899998888733 45678899998777654332 2 1111 1111235899
Q ss_pred EEeCCCCC
Q 020314 223 VINCVTGI 230 (327)
Q Consensus 223 v~d~~g~~ 230 (327)
.++|.|..
T Consensus 87 ~vncagia 94 (260)
T KOG1199|consen 87 LVNCAGIA 94 (260)
T ss_pred eeecccee
Confidence 99999853
No 285
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.57 E-value=0.088 Score=40.66 Aligned_cols=94 Identities=19% Similarity=0.271 Sum_probs=58.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC----cccccC--CCCCcccEEEeCCCCC
Q 020314 157 ILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD----GAALKS--PSGRKYDAVINCVTGI 230 (327)
Q Consensus 157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~----~~~~~~--~~~~~~d~v~d~~g~~ 230 (327)
|+|.| +|.+|...+..++..|.+|..+.+..+.+..++.|..... ..... ...... .....+|++|-|+-..
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQAGHDVTLVSRSPRLEAIKEQGLTITG-PDGDETVQPPIVISAPSADAGPYDLVIVAVKAY 78 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTCEEEEEESHHHHHHHHHHCEEEEE-TTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred CEEEC-cCHHHHHHHHHHHHCCCceEEEEccccHHhhhheeEEEEe-cccceecccccccCcchhccCCCcEEEEEeccc
Confidence 68899 7999998888887799999999876665656655543221 11111 011111 1345799999999765
Q ss_pred c----ccccccccCCCcEEEeecCCc
Q 020314 231 P----WSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 231 ~----~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. ++.+...+.++..++.+.+..
T Consensus 79 ~~~~~l~~l~~~~~~~t~iv~~qNG~ 104 (151)
T PF02558_consen 79 QLEQALQSLKPYLDPNTTIVSLQNGM 104 (151)
T ss_dssp GHHHHHHHHCTGEETTEEEEEESSSS
T ss_pred chHHHHHHHhhccCCCcEEEEEeCCC
Confidence 4 344455666667777775543
No 286
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.57 E-value=0.081 Score=45.39 Aligned_cols=35 Identities=14% Similarity=0.121 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|..+++.+...|++|+.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 56889999999999999999999899999988864
No 287
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.57 E-value=0.1 Score=44.26 Aligned_cols=34 Identities=6% Similarity=0.032 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++||+|++|++|...++.+...|++|+.++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4579999999999999998888889999888854
No 288
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.55 E-value=0.16 Score=49.37 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC----------------------cHHHHHhcCCCEEEeCCC-CCc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR----------------------NIELVKSLGADEVLDYKT-PDG 209 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~----------------------~~~~~~~lg~~~v~~~~~-~~~ 209 (327)
.+++|+|+| +|+.|+.++..+...|.+|+++.+.. +.++++.+|.+..++..- .+.
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 589999999 79999999999999999988887432 235567788776555431 111
Q ss_pred ccccCCCCCcccEEEeCCCCC
Q 020314 210 AALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 210 ~~~~~~~~~~~d~v~d~~g~~ 230 (327)
..... ..++|.+|.++|..
T Consensus 388 ~~~~l--~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDL--TSEYDAVFIGVGTY 406 (639)
T ss_pred CHHHH--HhcCCEEEEeCCCC
Confidence 11111 13589999999864
No 289
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.54 E-value=0.12 Score=43.20 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.++||+|++|++|...++.+...|.+|+.+.++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999998888889998888865
No 290
>PRK06720 hypothetical protein; Provisional
Probab=94.51 E-value=0.17 Score=40.02 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++..++|+||++++|...+..+...|++|+.+.++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~ 49 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDID 49 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 57789999999999999998888889999888754
No 291
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.50 E-value=0.11 Score=44.16 Aligned_cols=36 Identities=28% Similarity=0.167 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
-+++.++|+||++ ++|.+.++.+...|++|+...++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~ 43 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS 43 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc
Confidence 3678899999987 89999988888889998887754
No 292
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.49 E-value=0.14 Score=42.95 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=29.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC 185 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~ 185 (327)
+++.++|+|++|++|...++.+...|++++...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~ 34 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGC 34 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEc
Confidence 357899999999999999999998999988765
No 293
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=94.49 E-value=0.32 Score=35.76 Aligned_cols=92 Identities=18% Similarity=0.210 Sum_probs=56.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHH----HHhcCCCEE--EeCCCCCcccccCCCCCcccEE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIEL----VKSLGADEV--LDYKTPDGAALKSPSGRKYDAV 223 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~----~~~lg~~~v--~~~~~~~~~~~~~~~~~~~d~v 223 (327)
.++++|+-.| +| .|..+..+++..+ .++++++.+ ...+. ++.++...+ +..+... ... .....+|.|
T Consensus 18 ~~~~~vldlG-~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~D~v 92 (124)
T TIGR02469 18 RPGDVLWDIG-AG-SGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPE--ALE-DSLPEPDRV 92 (124)
T ss_pred CCCCEEEEeC-CC-CCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccc--cCh-hhcCCCCEE
Confidence 5678899998 44 4999999999764 589999844 33333 334443322 2111110 011 112469999
Q ss_pred EeCCCCC----cccccccccCCCcEEEee
Q 020314 224 INCVTGI----PWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 224 ~d~~g~~----~~~~~~~~l~~~G~~v~~ 248 (327)
+...+.. .++.+.+.|+++|+++..
T Consensus 93 ~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 93 FIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred EECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 8755422 267788899999998754
No 294
>PRK00536 speE spermidine synthase; Provisional
Probab=94.48 E-value=0.064 Score=45.51 Aligned_cols=95 Identities=21% Similarity=0.115 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCccc---ccCCCCCcccEEE-eC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAA---LKSPSGRKYDAVI-NC 226 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~---~~~~~~~~~d~v~-d~ 226 (327)
.+.++|||.| ||=|.++-+++|+-. +|+.+. +.+-.+.++++-....-..+++..++ ......+.||+|| |+
T Consensus 71 ~~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 5678999998 566788899999864 888887 44445555542221100112222111 1122235699986 65
Q ss_pred CCCCc-ccccccccCCCcEEEeec
Q 020314 227 VTGIP-WSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 227 ~g~~~-~~~~~~~l~~~G~~v~~g 249 (327)
+-.+. ++...++|+++|.++.-+
T Consensus 148 ~~~~~fy~~~~~~L~~~Gi~v~Qs 171 (262)
T PRK00536 148 EPDIHKIDGLKRMLKEDGVFISVA 171 (262)
T ss_pred CCChHHHHHHHHhcCCCcEEEECC
Confidence 54444 778889999999998654
No 295
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.48 E-value=0.68 Score=39.77 Aligned_cols=95 Identities=17% Similarity=0.139 Sum_probs=65.8
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||.....+..+ +..++. -.|++|+|.|.+..+|.-.+.++...|++|+..-+. +.+..
T Consensus 143 ~~PcTp~av~~ll-~~~~i~----l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~-------------- 203 (287)
T PRK14176 143 LVPCTPHGVIRAL-EEYGVD----IEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK-------------- 203 (287)
T ss_pred CCCCcHHHHHHHH-HHcCCC----CCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH--------------
Confidence 4465554555455 444552 389999999988889999999999999988765532 22210
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 251 (327)
. + +..|+++.++|-+.+- -.+.++++..++++|..
T Consensus 204 ----~---~--~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin 238 (287)
T PRK14176 204 ----Y---T--LDADILVVATGVKHLI-KADMVKEGAVIFDVGIT 238 (287)
T ss_pred ----H---H--hhCCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence 0 0 3478999999876632 34588888899999864
No 296
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.47 E-value=0.11 Score=44.09 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccCC--CCCcccEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKSP--SGRKYDAV 223 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~d~v 223 (327)
.++++||+|++|++|...++.+...|++|+.++++ ++.+ ..+.++... .+ |-.+.+ ....+.. .-..+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46789999999999999999988889999988865 3333 333443221 12 222211 1111110 11358999
Q ss_pred EeCCCC
Q 020314 224 INCVTG 229 (327)
Q Consensus 224 ~d~~g~ 229 (327)
+++.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
No 297
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.41 E-value=0.083 Score=43.86 Aligned_cols=72 Identities=19% Similarity=0.258 Sum_probs=45.1
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-EeCCCCC--cccccCCCCCcccEEEeCCC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-LDYKTPD--GAALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d~~g 228 (327)
+++|+||++++|.+.++.+...|++|+.+.+. ++.+ ..+.++...+ .|-.+.+ .+..+... ..+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 48999999999999999888889999988754 3433 2344443322 2222221 11121111 25899999875
No 298
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.12 Score=44.34 Aligned_cols=75 Identities=23% Similarity=0.198 Sum_probs=46.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCC-EE--EeCCCCC--cccccC--CCCCcccEEEe
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGAD-EV--LDYKTPD--GAALKS--PSGRKYDAVIN 225 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~-~v--~~~~~~~--~~~~~~--~~~~~~d~v~d 225 (327)
+++||+||+|++|...++.+...|++|+++.++ ++.+.++ ..+.. .. .|..+.+ ...+.. ....++|++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 469999999999999998888889999988865 3444332 22322 11 2222221 111110 11245899999
Q ss_pred CCCC
Q 020314 226 CVTG 229 (327)
Q Consensus 226 ~~g~ 229 (327)
+.|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9874
No 299
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=94.29 E-value=0.42 Score=39.14 Aligned_cols=90 Identities=19% Similarity=0.089 Sum_probs=56.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHH----HHHhcCCC---EEEeCCCCCcccccCCCCCccc
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIE----LVKSLGAD---EVLDYKTPDGAALKSPSGRKYD 221 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~----~~~~lg~~---~v~~~~~~~~~~~~~~~~~~~d 221 (327)
+++++||-.| .|.|..+..+++..+ .+|++++.. +-.+ .++..+.. .++..+.. .... ....||
T Consensus 71 ~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~--~~~~--~~~~fD 144 (205)
T PRK13944 71 RPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGK--RGLE--KHAPFD 144 (205)
T ss_pred CCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcc--cCCc--cCCCcc
Confidence 7889999998 356888888888764 589999854 3222 22344432 22222211 1111 124699
Q ss_pred EEEeCCCCCc-ccccccccCCCcEEEe
Q 020314 222 AVINCVTGIP-WSTFEPNLGTTGKVID 247 (327)
Q Consensus 222 ~v~d~~g~~~-~~~~~~~l~~~G~~v~ 247 (327)
.|+-+..... .....+.|+++|+++.
T Consensus 145 ~Ii~~~~~~~~~~~l~~~L~~gG~lvi 171 (205)
T PRK13944 145 AIIVTAAASTIPSALVRQLKDGGVLVI 171 (205)
T ss_pred EEEEccCcchhhHHHHHhcCcCcEEEE
Confidence 9987655433 5577789999999875
No 300
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.28 E-value=0.18 Score=42.47 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=29.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
.++++||+||+|++|...+..+...|++|+...+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 4568999999999999999988888999887653
No 301
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.28 E-value=0.13 Score=47.93 Aligned_cols=76 Identities=18% Similarity=0.197 Sum_probs=51.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC----------------------cHHHHHhcCCCEEEeCCCC-C
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR----------------------NIELVKSLGADEVLDYKTP-D 208 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~----------------------~~~~~~~lg~~~v~~~~~~-~ 208 (327)
..+++|+|.| +|+.|+.++..++..|.+|+...... ..++++++|.+..++..-. +
T Consensus 139 ~~~~~V~IIG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 217 (467)
T TIGR01318 139 PTGKRVAVIG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD 217 (467)
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc
Confidence 3678999999 79999999999999999988776321 2356678887655443211 1
Q ss_pred cccccCCCCCcccEEEeCCCCC
Q 020314 209 GAALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 209 ~~~~~~~~~~~~d~v~d~~g~~ 230 (327)
....... ..+|.+|.++|..
T Consensus 218 ~~~~~~~--~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 ISLDDLL--EDYDAVFLGVGTY 237 (467)
T ss_pred cCHHHHH--hcCCEEEEEeCCC
Confidence 0100101 3599999999964
No 302
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.24 E-value=0.071 Score=45.19 Aligned_cols=73 Identities=8% Similarity=-0.045 Sum_probs=46.6
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
+|||.||+|- |..++..+...|.+|++++.+ ...+.+...|...+....-............++|+|+|++..
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence 5999998776 988887777789999988854 455555555544444222111222233344678888888764
No 303
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.23 E-value=0.12 Score=44.30 Aligned_cols=76 Identities=24% Similarity=0.156 Sum_probs=46.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCC-EEE--eCCCCC--cccccC--CCCCcccEEE
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGAD-EVL--DYKTPD--GAALKS--PSGRKYDAVI 224 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v~ 224 (327)
+.++||+||+|++|..+++.+...|.+|+.++++ ++.+.. +.++.. ..+ |..+.. ...... ..-.++|.++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4579999999999999998888889999988865 333322 333322 122 222211 011110 0113589999
Q ss_pred eCCCC
Q 020314 225 NCVTG 229 (327)
Q Consensus 225 d~~g~ 229 (327)
++.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99984
No 304
>PRK07832 short chain dehydrogenase; Provisional
Probab=94.23 E-value=0.18 Score=43.26 Aligned_cols=32 Identities=13% Similarity=0.085 Sum_probs=28.4
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++|+||+|++|..+++.+...|++|+.+.++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~ 33 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRD 33 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 58999999999999999888899998887754
No 305
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.22 E-value=0.62 Score=40.01 Aligned_cols=96 Identities=20% Similarity=0.193 Sum_probs=65.8
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|+|.|.+..+|.-+..++...++.|+...+. ..++ +
T Consensus 137 ~~PcTp~av~~lL-~~~~i~----l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~--~------------ 197 (284)
T PRK14190 137 FLPCTPHGILELL-KEYNID----ISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLA--E------------ 197 (284)
T ss_pred CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHH--H------------
Confidence 3455544444444 455553 489999999999999999999999999988864322 1111 0
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|+++-++|.+.+ --.+.++++..++++|...
T Consensus 198 ----~~-----~~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 198 ----LT-----KQADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred ----HH-----HhCCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence 00 347889988887663 3345778898999998653
No 306
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.22 E-value=0.17 Score=44.32 Aligned_cols=34 Identities=15% Similarity=0.002 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
++++++|+||++++|...++.+...|++|+..++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~ 44 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDV 44 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 6789999999999999998888888999888774
No 307
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.19 E-value=0.19 Score=42.52 Aligned_cols=76 Identities=18% Similarity=0.149 Sum_probs=46.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-h-cCCCEE-EeCCCCCcccccCCCCCcccEEEeCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-S-LGADEV-LDYKTPDGAALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~-lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g 228 (327)
.+.+|||+||+|.+|..+++.+...|.+|++..+. ++..... . .+...+ .|..+......+.. +.++|++|.+.|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~-~~~~d~vi~~~g 94 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAI-GDDSDAVICATG 94 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHh-hcCCCEEEECCC
Confidence 45789999999999999998888789999988865 3322211 1 112211 23322111111211 136899998877
Q ss_pred C
Q 020314 229 G 229 (327)
Q Consensus 229 ~ 229 (327)
.
T Consensus 95 ~ 95 (251)
T PLN00141 95 F 95 (251)
T ss_pred C
Confidence 4
No 308
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.18 E-value=0.099 Score=38.80 Aligned_cols=91 Identities=20% Similarity=0.170 Sum_probs=54.1
Q ss_pred eEEEEcCCChHHHHHHHHHHhC-CCeEEEEe-cCC-c-HHHHHhcC----CCEEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314 156 NILITAASGAVGLYAVQLAKLG-NTHVTATC-GAR-N-IELVKSLG----ADEVLDYKTPDGAALKSPSGRKYDAVINCV 227 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~-~~~-~-~~~~~~lg----~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~ 227 (327)
+|.|+|++|-+|..+++++... .++++.+. ++. . ..+...++ ...+ ...+.+...+ ..+|++|.|+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDL-SVEDADPEEL-----SDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEE-BEEETSGHHH-----TTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccce-eEeecchhHh-----hcCCEEEecC
Confidence 5899999999999988888854 56777666 333 1 22333222 1111 1111111111 4699999999
Q ss_pred CCCc-ccccccccCCCcEEEeecCCc
Q 020314 228 TGIP-WSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 228 g~~~-~~~~~~~l~~~G~~v~~g~~~ 252 (327)
+... .+..-..++.+-++++.+...
T Consensus 75 ~~~~~~~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 75 PHGASKELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp CHHHHHHHHHHHHHTTSEEEESSSTT
T ss_pred chhHHHHHHHHHhhCCcEEEeCCHHH
Confidence 9765 344444567777899887653
No 309
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.11 E-value=0.14 Score=43.54 Aligned_cols=77 Identities=19% Similarity=0.229 Sum_probs=46.1
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEecC----CcHH-HHHhcCCCEEE--eCCCCC--cccccCC--CCCc
Q 020314 153 QQKNILITAA--SGAVGLYAVQLAKLGNTHVTATCGA----RNIE-LVKSLGADEVL--DYKTPD--GAALKSP--SGRK 219 (327)
Q Consensus 153 ~~~~vlV~g~--~g~~G~~~~~la~~~g~~v~~~~~~----~~~~-~~~~lg~~~v~--~~~~~~--~~~~~~~--~~~~ 219 (327)
+++++||+|| ++++|.+.++.+...|++|+.+.+. ++.+ +.++++....+ |-.+.+ .+.++.. .-+.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 5778999996 5799999988888899999877532 2222 22344432222 222222 1111111 1146
Q ss_pred ccEEEeCCCC
Q 020314 220 YDAVINCVTG 229 (327)
Q Consensus 220 ~d~v~d~~g~ 229 (327)
+|+++++.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999999873
No 310
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=94.10 E-value=0.12 Score=45.97 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.+|||+||+|.+|...++.+...|.+|+++++.
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~ 39 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRR 39 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecc
Confidence 57889999999999999999999899999998753
No 311
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.06 E-value=0.23 Score=43.69 Aligned_cols=36 Identities=33% Similarity=0.373 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
..+++|||+||+|.+|...++.+...|.+|++++++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD 38 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 357899999999999999998888889999888754
No 312
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.05 E-value=0.13 Score=43.54 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=29.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++||+||+|++|...+..+...|++|+.++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~ 35 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDID 35 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4579999999999999988888889999988854
No 313
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.04 E-value=0.13 Score=43.22 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.++||+||+|++|..+++.+...|++|++++++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~ 38 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRN 38 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999998888889999999865
No 314
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.02 E-value=0.15 Score=41.79 Aligned_cols=93 Identities=14% Similarity=0.176 Sum_probs=59.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
.+.+|||+| +|.+|.-=+.++...|++|++++.+. +.. +....... .+. ...+... . ..+++||-++++
T Consensus 11 ~~k~VlvvG-gG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~-~~~-~~~~~~~---~--~~~~lviaAt~d 82 (210)
T COG1648 11 EGKKVLVVG-GGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIK-WIE-REFDAED---L--DDAFLVIAATDD 82 (210)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcc-hhh-cccChhh---h--cCceEEEEeCCC
Confidence 678899999 69999999999999999999988442 332 22332211 111 1111111 1 238899999988
Q ss_pred Cccc-ccccccCCCcEEEeecCCch
Q 020314 230 IPWS-TFEPNLGTTGKVIDFNPSPR 253 (327)
Q Consensus 230 ~~~~-~~~~~l~~~G~~v~~g~~~~ 253 (327)
+.++ .........+.++.+...+.
T Consensus 83 ~~ln~~i~~~a~~~~i~vNv~D~p~ 107 (210)
T COG1648 83 EELNERIAKAARERRILVNVVDDPE 107 (210)
T ss_pred HHHHHHHHHHHHHhCCceeccCCcc
Confidence 7744 45556666677777765544
No 315
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.02 E-value=0.1 Score=43.57 Aligned_cols=70 Identities=24% Similarity=0.287 Sum_probs=48.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---HHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCC
Q 020314 157 ILITAASGAVGLYAVQLAKLGNTHVTATCGARN---IELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~ 229 (327)
|+|+||+|.+|...++.+...+.+|.+.+|+.+ ...++..|+..+ .-+-.+ ..+.+.. +|+|.||.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al--~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDDPESLVAAL--KGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-HHHHHHHH--TTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccCCHHHHHHHH--cCCceEEeecCc
Confidence 789999999999999999988889999998643 344567787644 222222 2222212 479999998883
No 316
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=93.98 E-value=0.21 Score=44.01 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++|||+||+|.+|..+++.+...|++|++++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~ 38 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRD 38 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcC
Confidence 57889999999999999999888889999887643
No 317
>PRK06484 short chain dehydrogenase; Validated
Probab=93.97 E-value=0.14 Score=48.50 Aligned_cols=78 Identities=12% Similarity=0.132 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH-HHhcCCCEE---EeCCCCC--cccccCC--CCCcccE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL-VKSLGADEV---LDYKTPD--GAALKSP--SGRKYDA 222 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~-~~~lg~~~v---~~~~~~~--~~~~~~~--~~~~~d~ 222 (327)
..++.+||+||++++|.+.++.+...|++|+.+.++ ++.+. .+.++.... .|..+.+ ...++.. .-+.+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467899999999999999998888899999998864 34433 344443321 2322222 1111111 1135899
Q ss_pred EEeCCCC
Q 020314 223 VINCVTG 229 (327)
Q Consensus 223 v~d~~g~ 229 (327)
++++.|.
T Consensus 347 li~nAg~ 353 (520)
T PRK06484 347 LVNNAGI 353 (520)
T ss_pred EEECCCC
Confidence 9999873
No 318
>PRK05854 short chain dehydrogenase; Provisional
Probab=93.95 E-value=0.13 Score=45.15 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+||++++|.++++.+...|++|+.++++
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999998888889999998865
No 319
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=93.95 E-value=0.39 Score=43.03 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=27.6
Q ss_pred CCCCeEEEEcCCChHHHH--HHHHHHhCCCeEEEEe
Q 020314 152 GQQKNILITAASGAVGLY--AVQLAKLGNTHVTATC 185 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~--~~~la~~~g~~v~~~~ 185 (327)
..++++||+|+++++|++ .++.+ ..|++++++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~ 73 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVF 73 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEe
Confidence 457899999999999999 55666 8899888776
No 320
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.94 E-value=0.17 Score=42.40 Aligned_cols=77 Identities=21% Similarity=0.231 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EEEeCCCCCc----ccccC--CCCCcccEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EVLDYKTPDG----AALKS--PSGRKYDAV 223 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v~~~~~~~~----~~~~~--~~~~~~d~v 223 (327)
++.++||+|++|++|..+++.+...|+.|+...+. ++.+ ....++.. ..+..+-.+. ..... ..-.++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56789999999999999998888889988776643 3433 22334432 1222211111 11110 011358999
Q ss_pred EeCCCC
Q 020314 224 INCVTG 229 (327)
Q Consensus 224 ~d~~g~ 229 (327)
+++.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999884
No 321
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.93 E-value=0.29 Score=41.76 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+||++ ++|.++++.+...|++|+...++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 567899999875 89999888888889998877654
No 322
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=93.92 E-value=0.2 Score=49.04 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++||+||+|++|.+.++.+...|++|+.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57899999999999999998888889999988854
No 323
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.92 E-value=0.17 Score=43.06 Aligned_cols=35 Identities=20% Similarity=0.108 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+|+++++|...+..+...|++|+.+.++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~ 43 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDIN 43 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 56789999999999999888888889998888754
No 324
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.89 E-value=0.21 Score=43.37 Aligned_cols=36 Identities=17% Similarity=0.101 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
-++.++||+|++|++|...++.+...|++|+.+.+.
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357889999999999999988888889999888753
No 325
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=93.88 E-value=1.4 Score=35.84 Aligned_cols=79 Identities=15% Similarity=0.136 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
-+|.+++|.| .|.+|..+++.+...|++|++.++. ++.+.+ +.+++. .++..+ +. ...+|+++-|..+
T Consensus 26 l~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~----l~----~~~~Dv~vp~A~~ 95 (200)
T cd01075 26 LEGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPEE----IY----SVDADVFAPCALG 95 (200)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcchh----hc----cccCCEEEecccc
Confidence 3778999999 7999999999999999999977754 444433 455643 223211 11 1248888866654
Q ss_pred Cc-ccccccccC
Q 020314 230 IP-WSTFEPNLG 240 (327)
Q Consensus 230 ~~-~~~~~~~l~ 240 (327)
.. -...++.++
T Consensus 96 ~~I~~~~~~~l~ 107 (200)
T cd01075 96 GVINDDTIPQLK 107 (200)
T ss_pred cccCHHHHHHcC
Confidence 33 334445553
No 326
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.87 E-value=0.18 Score=43.07 Aligned_cols=32 Identities=13% Similarity=0.030 Sum_probs=28.6
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++|+||+|++|...++.+...|++|+.++++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~ 33 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVN 33 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 59999999999999998888889999988854
No 327
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=93.86 E-value=0.15 Score=42.99 Aligned_cols=74 Identities=20% Similarity=0.211 Sum_probs=45.9
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCCE-EE--eCCCCC--cccccCC--CCCcccEEEeC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGADE-VL--DYKTPD--GAALKSP--SGRKYDAVINC 226 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~d~v~d~ 226 (327)
+++|+|++|++|.+.++.+...|++|+.+++. ++.+.+ ..++... .+ |-.+.+ .+.++.. ..+++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 58999999999999999988899999988865 343332 3334321 12 222211 1111110 11358999999
Q ss_pred CCC
Q 020314 227 VTG 229 (327)
Q Consensus 227 ~g~ 229 (327)
.|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
No 328
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.83 E-value=1.1 Score=38.95 Aligned_cols=94 Identities=19% Similarity=0.122 Sum_probs=63.6
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc-HHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN-IELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~-~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|.|.|.++.+|.-.+.++...|++|++..+..+ .+.
T Consensus 138 ~~PcTp~aii~lL-~~~~i~----l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e-------------- 198 (301)
T PRK14194 138 LTPCTPSGCLRLL-EDTCGD----LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA-------------- 198 (301)
T ss_pred CCCCcHHHHHHHH-HHhCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH--------------
Confidence 4465544455445 444553 48999999997789999999999999999887753321 110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCC
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~ 251 (327)
.. +..|+|+-++|.+. +... .++++..+|++|..
T Consensus 199 ----~~-----~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin 233 (301)
T PRK14194 199 ----LC-----RQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN 233 (301)
T ss_pred ----HH-----hcCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence 00 23688888888665 3322 38888888888854
No 329
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.83 E-value=1.1 Score=38.41 Aligned_cols=96 Identities=23% Similarity=0.274 Sum_probs=66.2
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||.....+..| +..++. -.|++++|.|.+..+|.=+..++...|+.|+..-+. ..+...
T Consensus 137 ~~PcTp~av~~lL-~~~~i~----l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~------------- 198 (278)
T PRK14172 137 FLPCTPNSVITLI-KSLNID----IEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEV------------- 198 (278)
T ss_pred CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 3455544555455 444552 489999999999999999999999889888755422 222110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+ .-.+.++++..+|++|-..
T Consensus 199 -----~-----~~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 199 -----C-----KKADILVVAIGRPKF-IDEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred -----H-----hhCCEEEEcCCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 0 337899999987764 3356788999999998654
No 330
>PRK08589 short chain dehydrogenase; Validated
Probab=93.82 E-value=0.15 Score=43.68 Aligned_cols=37 Identities=24% Similarity=0.124 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN 189 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~ 189 (327)
+++++||+||++++|.+.++.+...|++|+.+.++++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~ 41 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEA 41 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHH
Confidence 5789999999999999999888888999999886543
No 331
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=93.81 E-value=0.18 Score=42.46 Aligned_cols=36 Identities=17% Similarity=0.101 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
+++++||+|++|++|...++.+...|++|+.+.+..
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 567899999999999999998888899999988544
No 332
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=93.80 E-value=0.2 Score=44.83 Aligned_cols=93 Identities=14% Similarity=0.184 Sum_probs=62.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhC--CCeEEEEe-cC--CcH-HHHHhcCCCEEEeCCCCCcc------------------
Q 020314 155 KNILITAASGAVGLYAVQLAKLG--NTHVTATC-GA--RNI-ELVKSLGADEVLDYKTPDGA------------------ 210 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~-~~--~~~-~~~~~lg~~~v~~~~~~~~~------------------ 210 (327)
++|.|.|++|.+|..+++..+.. ..+|++.+ +. +++ +.++++++..+...++....
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 46999999999999999988765 46888887 33 333 46678888877654432110
Q ss_pred -cccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEe
Q 020314 211 -ALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVID 247 (327)
Q Consensus 211 -~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~ 247 (327)
..+......+|+|+++.++.. +...+.+++.+-++++
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 011112235899999998764 7777788876655544
No 333
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=93.79 E-value=0.64 Score=40.19 Aligned_cols=90 Identities=13% Similarity=-0.011 Sum_probs=51.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCC----CEEEeCCCCCcccccCCCCCcccEEEe
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGA----DEVLDYKTPDGAALKSPSGRKYDAVIN 225 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~----~~v~~~~~~~~~~~~~~~~~~~d~v~d 225 (327)
.+++|+|.| +|++|.+++..+...|+ +++.+.++ +|.+ +++.++. ..+...++. ... -..+|+|++
T Consensus 126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~-~~~-----~~~aDiVIn 198 (284)
T PRK12549 126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDL-AAA-----LAAADGLVH 198 (284)
T ss_pred cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccch-Hhh-----hCCCCEEEE
Confidence 567899999 79999999999999998 67766655 3433 3343321 122111110 001 134899999
Q ss_pred CCCCCc-----ccccccccCCCcEEEeec
Q 020314 226 CVTGIP-----WSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 226 ~~g~~~-----~~~~~~~l~~~G~~v~~g 249 (327)
|++..+ .......+.+...++++-
T Consensus 199 aTp~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 199 ATPTGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred CCcCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 975221 111123455555555554
No 334
>PLN02780 ketoreductase/ oxidoreductase
Probab=93.79 E-value=0.13 Score=45.30 Aligned_cols=35 Identities=9% Similarity=-0.017 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.|++++|+||++++|.+.++.+...|++|+.++++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~ 86 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARN 86 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC
Confidence 58899999999999999888777789999998865
No 335
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=93.77 E-value=0.17 Score=45.03 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=29.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++|||+||+|.+|..+++.+...|.+|+++++.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~ 33 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRR 33 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecC
Confidence 369999999999999999998889999998854
No 336
>PRK07062 short chain dehydrogenase; Provisional
Probab=93.75 E-value=0.16 Score=43.19 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+||++++|.+.++.+...|++|+.+.++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 57889999999999999999998899999988864
No 337
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=93.71 E-value=0.11 Score=45.33 Aligned_cols=73 Identities=16% Similarity=0.135 Sum_probs=42.1
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCcHHHHHhcCCCEEEe-CCCCC-cccccCCCCCcccEEEeCCCC
Q 020314 157 ILITAASGAVGLYAVQLAKLGNT-HVTATCGARNIELVKSLGADEVLD-YKTPD-GAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 157 vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~~~~~~~~~lg~~~v~~-~~~~~-~~~~~~~~~~~~d~v~d~~g~ 229 (327)
|||+||+|.+|..+++.+...|. +|+++.+..+......++...+.+ .+... .+.+....-.++|+|+++.+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccc
Confidence 68999999999999999998897 677766443322222222221211 11111 111111011469999998863
No 338
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.69 E-value=0.22 Score=41.95 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
.+.++||+||+|++|...++.+...|++++...+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~ 38 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK 38 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4678999999999999999888889999877664
No 339
>PRK13243 glyoxylate reductase; Reviewed
Probab=93.66 E-value=0.2 Score=44.40 Aligned_cols=88 Identities=22% Similarity=0.095 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP- 231 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~- 231 (327)
.|++|.|+| .|.+|...++.++.+|++|++..+..+.......+... .+ ..+.+ ...|+|+-++....
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~----~~-l~ell-----~~aDiV~l~lP~t~~ 217 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEY----RP-LEELL-----RESDFVSLHVPLTKE 217 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEe----cC-HHHHH-----hhCCEEEEeCCCChH
Confidence 688999999 89999999999999999999887543333333444321 11 01111 23688888776321
Q ss_pred ----c-cccccccCCCcEEEeecCC
Q 020314 232 ----W-STFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 232 ----~-~~~~~~l~~~G~~v~~g~~ 251 (327)
+ ...++.++++..+|.++..
T Consensus 218 T~~~i~~~~~~~mk~ga~lIN~aRg 242 (333)
T PRK13243 218 TYHMINEERLKLMKPTAILVNTARG 242 (333)
T ss_pred HhhccCHHHHhcCCCCeEEEECcCc
Confidence 2 2556788888888887644
No 340
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=93.65 E-value=1.2 Score=35.84 Aligned_cols=96 Identities=19% Similarity=0.043 Sum_probs=62.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCC--CC-c-ccccCCCCCcccEEEeCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKT--PD-G-AALKSPSGRKYDAVINCV 227 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~--~~-~-~~~~~~~~~~~d~v~d~~ 227 (327)
-.|++|+|.|.+..+|.=+..++...|++|+....+.-.... ..+.. -.+.. .+ . .+.+.+ +..|+++-++
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~-~~~~~--~hs~t~~~~~~~~l~~~~--~~ADIVIsAv 134 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFT-RGESI--RHEKHHVTDEEAMTLDCL--SQSDVVITGV 134 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccc-ccccc--ccccccccchhhHHHHHh--hhCCEEEEcc
Confidence 489999999999999999999999999999966422111000 00000 00000 01 0 011111 4589999999
Q ss_pred CCCcccccccccCCCcEEEeecCCc
Q 020314 228 TGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 228 g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
|.+.+.--.+.++++..+|++|...
T Consensus 135 G~~~~~i~~d~ik~GavVIDVGi~~ 159 (197)
T cd01079 135 PSPNYKVPTELLKDGAICINFASIK 159 (197)
T ss_pred CCCCCccCHHHcCCCcEEEEcCCCc
Confidence 9887644577899999999999653
No 341
>PRK06398 aldose dehydrogenase; Validated
Probab=93.65 E-value=0.15 Score=43.34 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++||+|+++++|.+.++.+...|++|+.+.++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 57889999999999999999999999999988854
No 342
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=93.62 E-value=0.15 Score=45.80 Aligned_cols=91 Identities=20% Similarity=0.173 Sum_probs=56.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHHHHhcC---CC-EEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIELVKSLG---AD-EVLDYKTPDGAALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~~~~lg---~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 228 (327)
.+|||.| +|++|..+++.+.+.| .+|+..+++ ++.+.+.... .. ..+|-.+.+ +..+.. +++|+||++.+
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~-al~~li--~~~d~VIn~~p 77 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD-ALVALI--KDFDLVINAAP 77 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChH-HHHHHH--hcCCEEEEeCC
Confidence 4699999 5999999999988777 699999976 6666554332 11 223322222 222222 23599999998
Q ss_pred CCcccccc-cccCCCcEEEeec
Q 020314 229 GIPWSTFE-PNLGTTGKVIDFN 249 (327)
Q Consensus 229 ~~~~~~~~-~~l~~~G~~v~~g 249 (327)
...-..++ .|++.+=.+++..
T Consensus 78 ~~~~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 78 PFVDLTILKACIKTGVDYVDTS 99 (389)
T ss_pred chhhHHHHHHHHHhCCCEEEcc
Confidence 76533333 4444444555554
No 343
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=93.59 E-value=0.14 Score=40.49 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=60.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeC-CCC---------------C--cccc-
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDY-KTP---------------D--GAAL- 212 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~-~~~---------------~--~~~~- 212 (327)
+..+|+|.| +|.+|+.|+++++.+|++++..+. .++.+..+.++...+... ... . ...+
T Consensus 19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 446789999 899999999999999999998884 456666677766544321 110 0 0011
Q ss_pred cCCCCCcccEEEeC-C--CC--Cc--ccccccccCCCcEEEeecCCch
Q 020314 213 KSPSGRKYDAVINC-V--TG--IP--WSTFEPNLGTTGKVIDFNPSPR 253 (327)
Q Consensus 213 ~~~~~~~~d~v~d~-~--g~--~~--~~~~~~~l~~~G~~v~~g~~~~ 253 (327)
+.. ..+|+++.+ . +. +. ....++.|+++..++++....+
T Consensus 98 ~~i--~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g 143 (168)
T PF01262_consen 98 EFI--APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG 143 (168)
T ss_dssp HHH--HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred HHH--hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence 111 246888852 2 21 11 4467778999999998875443
No 344
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.57 E-value=1.3 Score=38.09 Aligned_cols=96 Identities=19% Similarity=0.246 Sum_probs=67.1
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||.....+..| +..++. -.|++|+|.|.+..+|.-+..++...|+.|+..-+. ..++..
T Consensus 138 ~~PcTp~avi~ll-~~y~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~------------- 199 (284)
T PRK14177 138 YLPCTPYGMVLLL-KEYGID----VTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSI------------- 199 (284)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 3455544444444 444553 489999999999999999999999999988855422 222210
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+ .-.+.++++..++++|...
T Consensus 200 -----~-----~~ADIvIsAvGk~~~-i~~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 200 -----V-----RQADIIVGAVGKPEF-IKADWISEGAVLLDAGYNP 234 (284)
T ss_pred -----H-----hhCCEEEEeCCCcCc-cCHHHcCCCCEEEEecCcc
Confidence 0 347899999987764 3367889999999999754
No 345
>PRK08219 short chain dehydrogenase; Provisional
Probab=93.56 E-value=0.18 Score=41.59 Aligned_cols=72 Identities=15% Similarity=0.136 Sum_probs=43.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCCEEEeCCCCCc----ccccCCCCCcccEEEeCCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGADEVLDYKTPDG----AALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~~v~~~~~~~~----~~~~~~~~~~~d~v~d~~g 228 (327)
.++||+||+|.+|...+..+... .+|+++.++ ++.+.+. .+....++..+-.+. +..... .++|.++.+.|
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag 80 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNAG 80 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 57999999999999888777666 899988865 3333222 221122222221111 111111 26899999988
Q ss_pred C
Q 020314 229 G 229 (327)
Q Consensus 229 ~ 229 (327)
.
T Consensus 81 ~ 81 (227)
T PRK08219 81 V 81 (227)
T ss_pred c
Confidence 4
No 346
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.56 E-value=0.23 Score=42.20 Aligned_cols=35 Identities=6% Similarity=0.082 Sum_probs=30.0
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+||+ +++|.++++.+...|++|+.+.+.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~ 42 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAG 42 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCc
Confidence 57889999987 899999998888899999887643
No 347
>PRK07985 oxidoreductase; Provisional
Probab=93.55 E-value=0.17 Score=44.03 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
+++++||+||++++|.+.++.+...|++|+.+.+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 5678999999999999999888889999988764
No 348
>PRK09186 flagellin modification protein A; Provisional
Probab=93.55 E-value=0.19 Score=42.49 Aligned_cols=35 Identities=31% Similarity=0.240 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|...+..+...|++|+.+.++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADID 37 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 57889999999999999999998899999988854
No 349
>PRK07576 short chain dehydrogenase; Provisional
Probab=93.54 E-value=0.16 Score=43.39 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+||+|++|...++.+...|++|+.+++.
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 67889999999999999999888899999998854
No 350
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=93.53 E-value=0.39 Score=35.06 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=58.9
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc----
Q 020314 157 ILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP---- 231 (327)
Q Consensus 157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~---- 231 (327)
|+|.| .|.+|...++.++..+.++++++.+ ++.+.++..|.. ++..+..+...++..+-..++.++-+++++.
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~ 78 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENLL 78 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHH
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHHH
Confidence 57888 6999999999999966688888855 667777777744 5555544444444444456788887777554
Q ss_pred ccccccccCCCcEEEeecCC
Q 020314 232 WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 232 ~~~~~~~l~~~G~~v~~g~~ 251 (327)
....++.+.+..+++.....
T Consensus 79 ~~~~~r~~~~~~~ii~~~~~ 98 (116)
T PF02254_consen 79 IALLARELNPDIRIIARVND 98 (116)
T ss_dssp HHHHHHHHTTTSEEEEEESS
T ss_pred HHHHHHHHCCCCeEEEEECC
Confidence 22233445555666554443
No 351
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=93.53 E-value=0.19 Score=42.60 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
+++++||+||+|++|.+.++.+...|++|+.+.+.+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~ 42 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE 42 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence 578899999999999999998888899999887653
No 352
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=93.51 E-value=0.094 Score=39.20 Aligned_cols=89 Identities=13% Similarity=0.192 Sum_probs=55.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCC--CeEEEEec-C--CcH-HHHHhcCCCEEEeCCCCCcc--------------------
Q 020314 157 ILITAASGAVGLYAVQLAKLGN--THVTATCG-A--RNI-ELVKSLGADEVLDYKTPDGA-------------------- 210 (327)
Q Consensus 157 vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~-~--~~~-~~~~~lg~~~v~~~~~~~~~-------------------- 210 (327)
|.|.|++|.+|..++++.+... .+|++.+- + +++ +.++++.+..+.-.++....
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 5789999999999999999887 58888873 2 333 45578888877655432110
Q ss_pred -cccCCCCCcccEEEeCCCCCc-ccccccccCCCcEE
Q 020314 211 -ALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKV 245 (327)
Q Consensus 211 -~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~ 245 (327)
+.+......+|+++++..+-. +.-.+..++.+-++
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~i 117 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDI 117 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeE
Confidence 111112246888888776654 66666666655443
No 353
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.39 E-value=0.88 Score=39.33 Aligned_cols=97 Identities=23% Similarity=0.281 Sum_probs=63.6
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC----CCeEEEEecCCcHHHHHhcCCCEEEe
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG----NTHVTATCGARNIELVKSLGADEVLD 203 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~----g~~v~~~~~~~~~~~~~~lg~~~v~~ 203 (327)
..||........| +..++. -.|++|+|.|.+..+|.=++.++... ++.|+. |.+...++.+.
T Consensus 136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtv-chs~T~~l~~~-------- 201 (297)
T PRK14167 136 FKPCTPHGIQKLL-AAAGVD----TEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTV-CHSRTDDLAAK-------- 201 (297)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEE-eCCCCCCHHHH--------
Confidence 3455544445445 455553 48999999999999999888888766 676665 43221111100
Q ss_pred CCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 204 YKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 204 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|-+.+-. .+.++++..+|++|-..
T Consensus 202 --------~-----~~ADIvIsAvGkp~~i~-~~~ik~gaiVIDvGin~ 236 (297)
T PRK14167 202 --------T-----RRADIVVAAAGVPELID-GSMLSEGATVIDVGINR 236 (297)
T ss_pred --------H-----hhCCEEEEccCCcCccC-HHHcCCCCEEEEccccc
Confidence 0 34789999998766322 37888999999999543
No 354
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=93.36 E-value=0.17 Score=42.81 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+||+|++|...++.+...|++|+.+.++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence 57899999999999999998888889999888765
No 355
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=93.34 E-value=0.34 Score=39.05 Aligned_cols=94 Identities=14% Similarity=0.098 Sum_probs=51.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCcHHHHHhcCCCEE-EeCCCCC--cccccCCCCCcccEEEe-C
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATCGARNIELVKSLGADEV-LDYKTPD--GAALKSPSGRKYDAVIN-C 226 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~~~~~~~~~lg~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d-~ 226 (327)
+++++||..| +|.-+++.....+..+ .++++++.++.+ +..+...+ .|..+.. ..+.+...+.++|+|+. .
T Consensus 31 ~~g~~VLDiG-~GtG~~~~~l~~~~~~~~~v~~vDis~~~---~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~V~~~~ 106 (188)
T TIGR00438 31 KPGDTVLDLG-AAPGGWSQVAVEQVGGKGRVIAVDLQPMK---PIENVDFIRGDFTDEEVLNKIRERVGDDKVDVVMSDA 106 (188)
T ss_pred CCCCEEEEec-CCCCHHHHHHHHHhCCCceEEEEeccccc---cCCCceEEEeeCCChhHHHHHHHHhCCCCccEEEcCC
Confidence 7899999999 5555544433333333 489999844322 11222211 1222111 11122234557999995 2
Q ss_pred C----CC-------------CcccccccccCCCcEEEeec
Q 020314 227 V----TG-------------IPWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 227 ~----g~-------------~~~~~~~~~l~~~G~~v~~g 249 (327)
. |. ..+..+.++|+++|+++...
T Consensus 107 ~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 107 APNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 2 21 12456678999999998754
No 356
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.29 E-value=0.89 Score=39.06 Aligned_cols=95 Identities=23% Similarity=0.228 Sum_probs=63.9
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|.|.|.++.+|.-.+.++...|++|++.-+. +..+
T Consensus 137 ~~PcTp~avi~lL-~~~~i~----l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~--------------- 196 (284)
T PRK14179 137 MIPCTPAGIMEMF-REYNVE----LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLA--------------- 196 (284)
T ss_pred CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHH---------------
Confidence 3455544445445 444553 489999999999999999999999899988865221 1111
Q ss_pred CCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~ 252 (327)
+.. +..|+++-++|.+. +.. ..++++..+|++|...
T Consensus 197 ---~~~-----~~ADIVI~avg~~~~v~~--~~ik~GavVIDvgin~ 233 (284)
T PRK14179 197 ---EVA-----RKADILVVAIGRGHFVTK--EFVKEGAVVIDVGMNR 233 (284)
T ss_pred ---HHH-----hhCCEEEEecCccccCCH--HHccCCcEEEEeccee
Confidence 000 34789999898766 332 3588888889888553
No 357
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=93.29 E-value=0.37 Score=46.99 Aligned_cols=75 Identities=21% Similarity=0.220 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC----------------------cHHHHHhcCCCEEEeCCC-CC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR----------------------NIELVKSLGADEVLDYKT-PD 208 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~----------------------~~~~~~~lg~~~v~~~~~-~~ 208 (327)
..+++|+|+| +|+.|+.++..+...|.+|+++.+.. +.+.++++|.+...+..- .+
T Consensus 325 ~~~~~VaIIG-aGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIG-AGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 3688999999 79999999999999999988887432 134556777654333211 11
Q ss_pred cccccCCCCCcccEEEeCCCC
Q 020314 209 GAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 209 ~~~~~~~~~~~~d~v~d~~g~ 229 (327)
...... ...+|.+|.++|.
T Consensus 404 i~~~~~--~~~~DavilAtGa 422 (654)
T PRK12769 404 ISLESL--LEDYDAVFVGVGT 422 (654)
T ss_pred CCHHHH--HhcCCEEEEeCCC
Confidence 110010 1358999998885
No 358
>PRK07035 short chain dehydrogenase; Provisional
Probab=93.28 E-value=0.21 Score=42.14 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.+++|+||+|++|.+.++.+...|++|+.+.+.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~ 41 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK 41 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999999998899999988864
No 359
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=93.28 E-value=0.36 Score=42.50 Aligned_cols=95 Identities=15% Similarity=0.121 Sum_probs=56.7
Q ss_pred eEEEEcCCChHHHHHHHHHHhCC----CeEEEEecC---CcHHHHHhcCCCE------E------EeCCCCCccccc---
Q 020314 156 NILITAASGAVGLYAVQLAKLGN----THVTATCGA---RNIELVKSLGADE------V------LDYKTPDGAALK--- 213 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g----~~v~~~~~~---~~~~~~~~lg~~~------v------~~~~~~~~~~~~--- 213 (327)
+|.|.|. |.+|..+.+.+...+ .+++++..- +-++++.++...+ + +..++.......
T Consensus 1 ~IaInGf-GrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGF-GRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 3789995 999999999887653 577777532 2334443333210 0 000111111110
Q ss_pred --C--CCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCC
Q 020314 214 --S--PSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 214 --~--~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~ 251 (327)
. -...++|+||+|+|... .+.+..++..|++.|.++.+
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 0 02357999999999765 66777788888888877644
No 360
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.28 E-value=1.5 Score=37.57 Aligned_cols=96 Identities=18% Similarity=0.150 Sum_probs=66.0
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|+|.|.+..+|.=+..++...|+.|+..-+. ..++..
T Consensus 135 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~------------- 196 (282)
T PRK14169 135 VVASTPYGIMALL-DAYDID----VAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQL------------- 196 (282)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHH-------------
Confidence 3455544444444 444552 488999999999999999999999889988755322 222110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+ --.+.++++..++++|...
T Consensus 197 -----~-----~~ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 197 -----T-----KEADILVVAVGVPHF-IGADAVKPGAVVIDVGISR 231 (282)
T ss_pred -----H-----hhCCEEEEccCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 0 337899999987764 3356888999999998653
No 361
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=93.27 E-value=0.31 Score=37.62 Aligned_cols=71 Identities=23% Similarity=0.218 Sum_probs=47.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC--------cccccCCCCCcccEEEeC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD--------GAALKSPSGRKYDAVINC 226 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~--------~~~~~~~~~~~~d~v~d~ 226 (327)
.+|+|+|+-|.+|.++++..++.++-|.-++-.+..+ .....+++.+... .+.-..+.++.+|.||+-
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CV 79 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCV 79 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEe
Confidence 4699999999999999999999999888776322111 0111233332221 122345677889999987
Q ss_pred CCC
Q 020314 227 VTG 229 (327)
Q Consensus 227 ~g~ 229 (327)
.|+
T Consensus 80 AGG 82 (236)
T KOG4022|consen 80 AGG 82 (236)
T ss_pred ecc
Confidence 764
No 362
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=93.24 E-value=0.21 Score=42.34 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.++||+||+|++|...++.+...|++|+.++++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 57889999999999999998888899999888864
No 363
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=93.23 E-value=0.3 Score=44.04 Aligned_cols=36 Identities=19% Similarity=0.122 Sum_probs=32.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
..+.+|||+||+|-+|..++..+...|.+|+++++.
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~ 54 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWK 54 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEec
Confidence 567899999999999999999999899999999854
No 364
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.18 E-value=1.1 Score=38.61 Aligned_cols=95 Identities=22% Similarity=0.212 Sum_probs=63.3
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++++|.|.+..+|.=...++...++.|+..-+. ..+...
T Consensus 138 ~~PcTp~av~~lL-~~y~i~----l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~------------- 199 (288)
T PRK14171 138 FIPCTALGCLAVI-KKYEPN----LTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSI------------- 199 (288)
T ss_pred CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 3455544444444 555553 479999999999999999999999889888743322 222110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 251 (327)
. +..|+++-++|.+.+ --.+.++++..++++|-.
T Consensus 200 -----~-----~~ADIvV~AvGkp~~-i~~~~vk~GavVIDvGin 233 (288)
T PRK14171 200 -----T-----SKADIVVAAIGSPLK-LTAEYFNPESIVIDVGIN 233 (288)
T ss_pred -----H-----hhCCEEEEccCCCCc-cCHHHcCCCCEEEEeecc
Confidence 0 237888888886541 224678888888888854
No 365
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.16 E-value=0.3 Score=41.20 Aligned_cols=33 Identities=21% Similarity=0.130 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC 185 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~ 185 (327)
++.+++|+|++|++|..+++.+...|++|+...
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~ 37 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHY 37 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 457899999999999999988888899887754
No 366
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=93.15 E-value=0.27 Score=46.48 Aligned_cols=86 Identities=19% Similarity=0.108 Sum_probs=57.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP- 231 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~- 231 (327)
.|++|.|+| .|.+|...++.++.+|++|++.++....+....++...+ +. .+.+ ...|+|+-+++...
T Consensus 139 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~-~l----~ell-----~~aDiV~l~lP~t~~ 207 (526)
T PRK13581 139 YGKTLGIIG-LGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELV-SL----DELL-----ARADFITLHTPLTPE 207 (526)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEE-cH----HHHH-----hhCCEEEEccCCChH
Confidence 688999999 899999999999999999999885433333444554322 11 1111 23677877776321
Q ss_pred ----c-cccccccCCCcEEEeec
Q 020314 232 ----W-STFEPNLGTTGKVIDFN 249 (327)
Q Consensus 232 ----~-~~~~~~l~~~G~~v~~g 249 (327)
+ ...+..++++..+|.++
T Consensus 208 t~~li~~~~l~~mk~ga~lIN~a 230 (526)
T PRK13581 208 TRGLIGAEELAKMKPGVRIINCA 230 (526)
T ss_pred hhcCcCHHHHhcCCCCeEEEECC
Confidence 2 24566778877777665
No 367
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=93.11 E-value=0.24 Score=42.51 Aligned_cols=36 Identities=22% Similarity=0.159 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
-.++.+||+|++.++|.+.+..+...|++|+.+.++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~ 41 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRS 41 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 478899999999999999999999999999999865
No 368
>PRK08703 short chain dehydrogenase; Provisional
Probab=93.10 E-value=0.2 Score=41.94 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+|++|++|...++.+...|++|+.+++.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 56789999999999999998888899999988865
No 369
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.10 E-value=0.24 Score=42.04 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
+++++||+||++++|.+.++.+...|++|+.+.+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 6789999999999999999888889999887764
No 370
>PRK01581 speE spermidine synthase; Validated
Probab=93.07 E-value=0.35 Score=43.00 Aligned_cols=96 Identities=20% Similarity=0.207 Sum_probs=55.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEe---CCCC-------C-cccccCCCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLD---YKTP-------D-GAALKSPSGR 218 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~---~~~~-------~-~~~~~~~~~~ 218 (327)
.+.++|||.| ||.|.++..++++.+. +|+++.- ++-.+.++.+..-.-++ ..++ + ...+.. ...
T Consensus 149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~ 225 (374)
T PRK01581 149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS 225 (374)
T ss_pred CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence 4567999999 4567777888887654 8888874 45566666421100000 0011 1 111122 235
Q ss_pred cccEEEeCCCCC------------cccccccccCCCcEEEeecC
Q 020314 219 KYDAVINCVTGI------------PWSTFEPNLGTTGKVIDFNP 250 (327)
Q Consensus 219 ~~d~v~d~~g~~------------~~~~~~~~l~~~G~~v~~g~ 250 (327)
.||+||--...+ .+..+.+.|+++|.++.-..
T Consensus 226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 699997543322 24566779999999876543
No 371
>PRK07856 short chain dehydrogenase; Provisional
Probab=93.07 E-value=0.2 Score=42.34 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++||+||+|++|...++.+...|++|+.+++.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999998888899999988865
No 372
>PLN00016 RNA-binding protein; Provisional
Probab=93.07 E-value=0.26 Score=44.55 Aligned_cols=94 Identities=15% Similarity=0.152 Sum_probs=55.7
Q ss_pred CCCeEEEE----cCCChHHHHHHHHHHhCCCeEEEEecCC-cHHH-----------HHhcCCCEEEeCCCCCcccccCCC
Q 020314 153 QQKNILIT----AASGAVGLYAVQLAKLGNTHVTATCGAR-NIEL-----------VKSLGADEVLDYKTPDGAALKSPS 216 (327)
Q Consensus 153 ~~~~vlV~----g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~-----------~~~lg~~~v~~~~~~~~~~~~~~~ 216 (327)
...+|||+ ||+|-+|..++..+...|.+|+++++.. +... +...+...+. .+-.+ ......
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~D~~d--~~~~~~ 127 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-GDPAD--VKSKVA 127 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-ecHHH--HHhhhc
Confidence 44679999 9999999999988888899999998653 2111 1122332221 11111 111122
Q ss_pred CCcccEEEeCCCCCc--ccccccccCCC--cEEEeec
Q 020314 217 GRKYDAVINCVTGIP--WSTFEPNLGTT--GKVIDFN 249 (327)
Q Consensus 217 ~~~~d~v~d~~g~~~--~~~~~~~l~~~--G~~v~~g 249 (327)
..++|+|+++.+.+. ....++.++.. .++|.++
T Consensus 128 ~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~S 164 (378)
T PLN00016 128 GAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCS 164 (378)
T ss_pred cCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEc
Confidence 357999999987532 33444444433 3777654
No 373
>PRK06172 short chain dehydrogenase; Provisional
Probab=93.05 E-value=0.24 Score=41.83 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+|++|++|...++.+...|++|+.++++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~ 40 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRD 40 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 57889999999999999998888889999988865
No 374
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.05 E-value=1.8 Score=37.22 Aligned_cols=96 Identities=20% Similarity=0.156 Sum_probs=66.9
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||.....+..| +..++. -.|++|+|.|.+..+|.=++.++...|++|+..-+. ..+...
T Consensus 137 ~~PcTp~aii~lL-~~y~i~----l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~------------- 198 (282)
T PRK14180 137 LESCTPKGIMTML-REYGIK----TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH------------- 198 (282)
T ss_pred cCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHH-------------
Confidence 4565555555555 444442 479999999999999999999999889988655432 222110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+ .-.+.++++..++++|...
T Consensus 199 -----~-----k~ADIvIsAvGkp~~-i~~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 199 -----T-----TKADILIVAVGKPNF-ITADMVKEGAVVIDVGINH 233 (282)
T ss_pred -----h-----hhcCEEEEccCCcCc-CCHHHcCCCcEEEEecccc
Confidence 0 347999999997765 2347888999999998653
No 375
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.03 E-value=1.3 Score=37.93 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=65.0
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~ 206 (327)
..|+.....+..| +..++. -.|.+|+|.|.+..+|.-...++...|++|+...+.. .+. +.
T Consensus 131 ~~PcTp~av~~ll-~~~~i~----l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~--~~----------- 192 (279)
T PRK14178 131 FAPCTPNGIMTLL-HEYKIS----IAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLK--AE----------- 192 (279)
T ss_pred CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHH--HH-----------
Confidence 3455544445445 445553 4889999999888999999999999999888766432 111 10
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 251 (327)
. +..|+++.++|.+.+ -.-+.++++..++++|..
T Consensus 193 -----~-----~~ADIvI~Avgk~~l-v~~~~vk~GavVIDVgi~ 226 (279)
T PRK14178 193 -----L-----RQADILVSAAGKAGF-ITPDMVKPGATVIDVGIN 226 (279)
T ss_pred -----H-----hhCCEEEECCCcccc-cCHHHcCCCcEEEEeecc
Confidence 0 347899999985542 223457899999999865
No 376
>PRK07574 formate dehydrogenase; Provisional
Probab=92.99 E-value=0.47 Score=42.84 Aligned_cols=90 Identities=14% Similarity=0.121 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP 231 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 231 (327)
.|.+|.|+| .|.+|...++.++.+|++|++..+.. ..+..+.++.... .+ ..+.+ ...|+|+-+.....
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~---~~-l~ell-----~~aDvV~l~lPlt~ 260 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH---VS-FDSLV-----SVCDVVTIHCPLHP 260 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec---CC-HHHHh-----hcCCEEEEcCCCCH
Confidence 678899999 89999999999999999999988543 3333344443211 11 01122 34789988887322
Q ss_pred -----c-cccccccCCCcEEEeecCCc
Q 020314 232 -----W-STFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 232 -----~-~~~~~~l~~~G~~v~~g~~~ 252 (327)
+ ...+..|+++..+|.++...
T Consensus 261 ~T~~li~~~~l~~mk~ga~lIN~aRG~ 287 (385)
T PRK07574 261 ETEHLFDADVLSRMKRGSYLVNTARGK 287 (385)
T ss_pred HHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence 2 25667889988888887543
No 377
>PRK07890 short chain dehydrogenase; Provisional
Probab=92.94 E-value=0.21 Score=42.24 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+||++++|...++.+...|++|+.++++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 56789999999999999999888999999988864
No 378
>PRK06101 short chain dehydrogenase; Provisional
Probab=92.93 E-value=0.24 Score=41.47 Aligned_cols=39 Identities=18% Similarity=0.120 Sum_probs=31.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV 193 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~ 193 (327)
.+++|+||+|++|...++.+...|++|+.++++ ++.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~ 41 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL 41 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 469999999999999888888889999988865 444433
No 379
>PRK06487 glycerate dehydrogenase; Provisional
Probab=92.93 E-value=0.19 Score=44.19 Aligned_cols=83 Identities=13% Similarity=-0.031 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Cc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IP 231 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~ 231 (327)
.|++|.|+| .|.+|...++.++.+|++|++..+..+... .. ..+ -.+++ ...|+|..+..- +.
T Consensus 147 ~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~~~-----~~----~~~-l~ell-----~~sDiv~l~lPlt~~ 210 (317)
T PRK06487 147 EGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRPAR-----PD----RLP-LDELL-----PQVDALTLHCPLTEH 210 (317)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCccc-----cc----ccC-HHHHH-----HhCCEEEECCCCChH
Confidence 678999999 899999999999999999998875422110 00 000 01111 225777766652 11
Q ss_pred -----ccccccccCCCcEEEeecCC
Q 020314 232 -----WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 232 -----~~~~~~~l~~~G~~v~~g~~ 251 (327)
-...++.|+++..+|.++..
T Consensus 211 T~~li~~~~~~~mk~ga~lIN~aRG 235 (317)
T PRK06487 211 TRHLIGARELALMKPGALLINTARG 235 (317)
T ss_pred HhcCcCHHHHhcCCCCeEEEECCCc
Confidence 23556788888888877644
No 380
>PRK08226 short chain dehydrogenase; Provisional
Probab=92.93 E-value=0.25 Score=41.93 Aligned_cols=36 Identities=17% Similarity=0.051 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
++.+++|+|++|++|...++.+...|++|+.+.+++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~ 40 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISP 40 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH
Confidence 567899999999999999998888899998888653
No 381
>PLN02928 oxidoreductase family protein
Probab=92.92 E-value=0.58 Score=41.74 Aligned_cols=93 Identities=18% Similarity=0.172 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcC--C---CEEEeC--CCCC-cccccCCCCCcccEEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLG--A---DEVLDY--KTPD-GAALKSPSGRKYDAVI 224 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg--~---~~v~~~--~~~~-~~~~~~~~~~~~d~v~ 224 (327)
.|+++.|+| .|.+|..+++.++.+|++|++..+..+.+....++ . ....+. ...+ .+.+ ...|+|+
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell-----~~aDiVv 231 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFA-----GEADIVV 231 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHH-----hhCCEEE
Confidence 688999999 89999999999999999999987542222111111 0 000100 0001 1122 2379999
Q ss_pred eCCCCC-----c-ccccccccCCCcEEEeecCC
Q 020314 225 NCVTGI-----P-WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 225 d~~g~~-----~-~~~~~~~l~~~G~~v~~g~~ 251 (327)
.+.... . -...+..|+++..+|.++..
T Consensus 232 l~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG 264 (347)
T PLN02928 232 LCCTLTKETAGIVNDEFLSSMKKGALLVNIARG 264 (347)
T ss_pred ECCCCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence 887632 1 23666799999999988754
No 382
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.91 E-value=1.8 Score=37.33 Aligned_cols=96 Identities=18% Similarity=0.193 Sum_probs=65.8
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|+|.|.+..+|.=+..++...++.|+..-+. ..++..
T Consensus 134 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~------------- 195 (287)
T PRK14173 134 LEPCTPAGVVRLL-KHYGIP----LAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV------------- 195 (287)
T ss_pred CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 3455544444444 455552 379999999999999999999999889988755432 222110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+- --+.++++..++++|...
T Consensus 196 -----~-----~~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 196 -----T-----RRADVLVVAVGRPHLI-TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred -----H-----hhCCEEEEecCCcCcc-CHHHcCCCCEEEEccCcc
Confidence 0 2378899888876643 356788888999998653
No 383
>PRK08303 short chain dehydrogenase; Provisional
Probab=92.90 E-value=0.21 Score=43.74 Aligned_cols=35 Identities=17% Similarity=0.076 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+||++++|.++++.+...|++|+.+++.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 57889999999999999999988899999988753
No 384
>PLN02214 cinnamoyl-CoA reductase
Probab=92.89 E-value=0.37 Score=42.88 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++.+|||+||+|.+|...++.+...|.+|+++++.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~ 43 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRN 43 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 356789999999999999999888889999998864
No 385
>PRK06128 oxidoreductase; Provisional
Probab=92.88 E-value=0.26 Score=42.93 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
.++++||+||++++|.++++.+...|++|+.+.+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~ 87 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYL 87 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 5678999999999999999888889999887764
No 386
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.88 E-value=1.9 Score=37.04 Aligned_cols=96 Identities=18% Similarity=0.193 Sum_probs=66.2
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||.....+..| +..++. -.|++|+|.|.+..+|.=+..++...++.|+..-+. ..++..
T Consensus 136 ~~PcTp~avi~lL-~~y~i~----l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~------------- 197 (282)
T PRK14166 136 FLPCTPLGVMKLL-KAYEID----LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLY------------- 197 (282)
T ss_pred CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 4565554555455 444552 489999999999999999999999889888854322 222110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+ --.+.++++..++++|-..
T Consensus 198 -----~-----~~ADIvIsAvGkp~~-i~~~~vk~GavVIDvGin~ 232 (282)
T PRK14166 198 -----T-----RQADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR 232 (282)
T ss_pred -----H-----hhCCEEEEcCCCcCc-cCHHHcCCCCEEEEecccc
Confidence 0 347899999987764 3345788999999998543
No 387
>PRK06125 short chain dehydrogenase; Provisional
Probab=92.87 E-value=0.26 Score=41.85 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+|+++++|...++.+...|++|+.+.++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 57899999999999999998888889999988864
No 388
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=92.87 E-value=0.4 Score=42.87 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
..+.+|||+||+|.+|..+++.+...|.+|+++.+.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~ 43 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRD 43 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356789999999999999999888889999988754
No 389
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.86 E-value=1.8 Score=37.43 Aligned_cols=96 Identities=19% Similarity=0.138 Sum_probs=66.1
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|+|.|.+..+|.=...++...+++|+..-+. ..+...
T Consensus 139 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~------------- 200 (294)
T PRK14187 139 LIPCTPKGCLYLI-KTITRN----LSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADY------------- 200 (294)
T ss_pred ccCcCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHH-------------
Confidence 3455544445455 444553 489999999999999999999999999988855432 222110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+ --.+.++++..+|++|-..
T Consensus 201 -----~-----~~ADIvVsAvGkp~~-i~~~~ik~gaiVIDVGin~ 235 (294)
T PRK14187 201 -----C-----SKADILVAAVGIPNF-VKYSWIKKGAIVIDVGINS 235 (294)
T ss_pred -----H-----hhCCEEEEccCCcCc-cCHHHcCCCCEEEEecccc
Confidence 0 347899999987664 3346788888889998543
No 390
>PRK06114 short chain dehydrogenase; Provisional
Probab=92.85 E-value=0.32 Score=41.14 Aligned_cols=35 Identities=11% Similarity=0.008 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+|+++++|.++++.+...|++|+.+.++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~ 41 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLR 41 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57789999999999999999888899999988854
No 391
>PRK05876 short chain dehydrogenase; Provisional
Probab=92.84 E-value=0.22 Score=42.82 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|.+.++.+...|++|+.+.++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999888899998888754
No 392
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=92.84 E-value=0.33 Score=42.49 Aligned_cols=91 Identities=15% Similarity=0.191 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 230 (327)
..+|.|+| .|.+|.+.+..++..|. +|++..++ ++.+.+++.|....... + ..+.. ...|+|+.|+...
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~-~-~~~~~-----~~aDvViiavp~~ 77 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTT-S-AAEAV-----KGADLVILCVPVG 77 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecC-C-HHHHh-----cCCCEEEECCCHH
Confidence 35799999 89999999888887774 77777754 56666667765321111 1 11111 3589999999864
Q ss_pred c----ccccccccCCCcEEEeecCCc
Q 020314 231 P----WSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 231 ~----~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +......++++..+++++...
T Consensus 78 ~~~~v~~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 78 ASGAVAAEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHHHHHHHhhCCCCCEEEeCccch
Confidence 4 233334567777777776543
No 393
>PLN02366 spermidine synthase
Probab=92.80 E-value=0.32 Score=42.54 Aligned_cols=96 Identities=20% Similarity=0.184 Sum_probs=53.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCC--EEEeCCC-----CC-cccccCCCCCccc
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGAD--EVLDYKT-----PD-GAALKSPSGRKYD 221 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~--~v~~~~~-----~~-~~~~~~~~~~~~d 221 (327)
.+.++||+.|+ | -|.++..++++.+. +|+++.-+ +-.+.+++.-.. ..++... .+ ...++...++.+|
T Consensus 90 ~~pkrVLiIGg-G-~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 90 PNPKKVLVVGG-G-DGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCeEEEEcC-C-ccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 56789999994 3 36677888888765 77777743 334444432110 0010000 01 1112222245799
Q ss_pred EEEeCCCCC-----------cccccccccCCCcEEEeec
Q 020314 222 AVINCVTGI-----------PWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 222 ~v~d~~g~~-----------~~~~~~~~l~~~G~~v~~g 249 (327)
+|+--...+ .++.+.++|+++|.++.-+
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 998533321 1556678999999997543
No 394
>PRK08655 prephenate dehydrogenase; Provisional
Probab=92.79 E-value=0.27 Score=45.39 Aligned_cols=86 Identities=21% Similarity=0.256 Sum_probs=55.8
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc--
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-- 231 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-- 231 (327)
+|.|.||.|.+|.+.+..++..|.+|++..++ ++ .+.+..+|.... .+ ..... ...|+|+-|+....
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~---~~-~~e~~-----~~aDvVIlavp~~~~~ 72 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYA---ND-NIDAA-----KDADIVIISVPINVTE 72 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeec---cC-HHHHh-----ccCCEEEEecCHHHHH
Confidence 48899988999999999999999998888854 33 245566665311 11 01111 24688888887543
Q ss_pred --ccccccccCCCcEEEeecC
Q 020314 232 --WSTFEPNLGTTGKVIDFNP 250 (327)
Q Consensus 232 --~~~~~~~l~~~G~~v~~g~ 250 (327)
+......++++..+++++.
T Consensus 73 ~vl~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 73 DVIKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHHHHhhCCCCCEEEEccc
Confidence 3333445666677777765
No 395
>PRK14967 putative methyltransferase; Provisional
Probab=92.77 E-value=0.35 Score=40.14 Aligned_cols=68 Identities=26% Similarity=0.271 Sum_probs=40.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHH----HhcCCC-EEEeCCCCCcccccCCCCCcccEEE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELV----KSLGAD-EVLDYKTPDGAALKSPSGRKYDAVI 224 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~----~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~ 224 (327)
+++++||-.| +|. |..++.+++. ++ ++++++.+ +..+.+ +..+.. .+++.+- ... .....||+|+
T Consensus 35 ~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~--~~~---~~~~~fD~Vi 106 (223)
T PRK14967 35 GPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDW--ARA---VEFRPFDVVV 106 (223)
T ss_pred CCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECch--hhh---ccCCCeeEEE
Confidence 6788999998 554 8888888875 55 89888844 434333 233332 2222111 111 1235699999
Q ss_pred eCC
Q 020314 225 NCV 227 (327)
Q Consensus 225 d~~ 227 (327)
.+.
T Consensus 107 ~np 109 (223)
T PRK14967 107 SNP 109 (223)
T ss_pred ECC
Confidence 754
No 396
>PRK08317 hypothetical protein; Provisional
Probab=92.76 E-value=0.48 Score=39.46 Aligned_cols=99 Identities=20% Similarity=0.201 Sum_probs=58.7
Q ss_pred HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHHHhc---CCCEEEeCCCCCcccccCC
Q 020314 142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELVKSL---GADEVLDYKTPDGAALKSP 215 (327)
Q Consensus 142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~~~l---g~~~v~~~~~~~~~~~~~~ 215 (327)
+..++ +++++||-.| +| .|..+..+++..+ .++++++.+ +..+.+++. ....+ .....+..... .
T Consensus 13 ~~~~~-----~~~~~vLdiG-~G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~-~~~~~d~~~~~-~ 83 (241)
T PRK08317 13 ELLAV-----QPGDRVLDVG-CG-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNV-EFVRGDADGLP-F 83 (241)
T ss_pred HHcCC-----CCCCEEEEeC-CC-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCce-EEEecccccCC-C
Confidence 44555 7889999999 44 3888889988763 589998844 445555433 11111 11111111111 1
Q ss_pred CCCcccEEEeCC-----CCC--cccccccccCCCcEEEeec
Q 020314 216 SGRKYDAVINCV-----TGI--PWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 216 ~~~~~d~v~d~~-----g~~--~~~~~~~~l~~~G~~v~~g 249 (327)
....+|+|+... ... .+..+.++|+++|.++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 224689887532 221 2677888999999998654
No 397
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.74 E-value=1.9 Score=36.98 Aligned_cols=96 Identities=18% Similarity=0.200 Sum_probs=66.0
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|+|.|.+..+|.=...++...+++|+..-+. ..++.
T Consensus 136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~-------------- 196 (284)
T PRK14170 136 FVPCTPAGIIELI-KSTGTQ----IEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQ-------------- 196 (284)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH--------------
Confidence 3465554445445 455553 479999999999999999999999889888755322 22210
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|+++-++|.+.+ ---+.++++..++++|...
T Consensus 197 ----~~-----~~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 197 ----VA-----KEADILVVATGLAKF-VKKDYIKPGAIVIDVGMDR 232 (284)
T ss_pred ----HH-----hhCCEEEEecCCcCc-cCHHHcCCCCEEEEccCcc
Confidence 00 337899988887664 3356788888999998653
No 398
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=92.73 E-value=0.15 Score=41.45 Aligned_cols=91 Identities=16% Similarity=0.048 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH----HhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVINC 226 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 226 (327)
.++.+||-.|+ |.|..+..+++. |.+|++++.+ +-.+.+ +..+...+ .....+..... -...||+|+.+
T Consensus 29 ~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~~--~~~~fD~I~~~ 102 (197)
T PRK11207 29 VKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNLT--FDGEYDFILST 102 (197)
T ss_pred CCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhCC--cCCCcCEEEEe
Confidence 56678999983 447778888875 7899999843 333332 23232211 11101111111 12459999875
Q ss_pred CCC---------CcccccccccCCCcEEEee
Q 020314 227 VTG---------IPWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 227 ~g~---------~~~~~~~~~l~~~G~~v~~ 248 (327)
..- ..+..+.+.|+++|.++.+
T Consensus 103 ~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 103 VVLMFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred cchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 431 1255677799999996544
No 399
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=92.69 E-value=0.13 Score=38.42 Aligned_cols=78 Identities=22% Similarity=0.246 Sum_probs=46.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-C-CcHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCG-A-RNIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~-~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 230 (327)
--+|-|.| +|.+|..+...++..|.+|..+.+ + ++.+.+ ..++...+.+..+ .. ...|++|=++.++
T Consensus 10 ~l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~----~~-----~~aDlv~iavpDd 79 (127)
T PF10727_consen 10 RLKIGIIG-AGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE----IL-----RDADLVFIAVPDD 79 (127)
T ss_dssp --EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG----GG-----CC-SEEEE-S-CC
T ss_pred ccEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc----cc-----ccCCEEEEEechH
Confidence 34689999 799999999999999999988863 3 344444 3445444333211 11 3489999999988
Q ss_pred cccccccccCC
Q 020314 231 PWSTFEPNLGT 241 (327)
Q Consensus 231 ~~~~~~~~l~~ 241 (327)
.+....+.|..
T Consensus 80 aI~~va~~La~ 90 (127)
T PF10727_consen 80 AIAEVAEQLAQ 90 (127)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 77766655543
No 400
>PRK08643 acetoin reductase; Validated
Probab=92.68 E-value=0.29 Score=41.39 Aligned_cols=34 Identities=18% Similarity=0.098 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++||+|++|++|...++.+...|++|+.++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4679999999999999999888899999988854
No 401
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.67 E-value=1.4 Score=37.96 Aligned_cols=96 Identities=20% Similarity=0.216 Sum_probs=64.2
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC----CCeEEEEecC-CcHHHHHhcCCCEEE
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG----NTHVTATCGA-RNIELVKSLGADEVL 202 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~----g~~v~~~~~~-~~~~~~~~lg~~~v~ 202 (327)
..||.....+..| +..++. -.|++|+|.|.+..+|.=...++... ++.|+..-+. ..++.
T Consensus 132 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~---------- 196 (287)
T PRK14181 132 FIPCTPAGIIELL-KYYEIP----LHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTE---------- 196 (287)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHH----------
Confidence 4565555555455 455553 47999999999999999888888877 6666643221 11110
Q ss_pred eCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 203 DYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|+++-++|.+.+ --.+.++++..++++|...
T Consensus 197 --------~~-----~~ADIvV~AvG~p~~-i~~~~ik~GavVIDvGin~ 232 (287)
T PRK14181 197 --------IL-----KTADIIIAAIGVPLF-IKEEMIAEKAVIVDVGTSR 232 (287)
T ss_pred --------HH-----hhCCEEEEccCCcCc-cCHHHcCCCCEEEEecccc
Confidence 00 347899999987653 3356888999999998653
No 402
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=92.64 E-value=0.43 Score=40.54 Aligned_cols=33 Identities=15% Similarity=0.144 Sum_probs=28.6
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEe
Q 020314 153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATC 185 (327)
Q Consensus 153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~ 185 (327)
.+++++|+||+ +++|.+.++.+...|++|+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~ 39 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITY 39 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEe
Confidence 57889999975 7999999988888999988775
No 403
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=92.64 E-value=0.18 Score=45.46 Aligned_cols=95 Identities=21% Similarity=0.217 Sum_probs=54.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcc
Q 020314 155 KNILITAASGAVGLYAVQLAKLG-NTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW 232 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 232 (327)
.+|.|.||+|-+|...++++..+ ..++..+.+.+ ..+....... .+...+.......+...-.++|+||-+.+....
T Consensus 39 ~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~-~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~s 117 (381)
T PLN02968 39 KRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFP-HLITQDLPNLVAVKDADFSDVDAVFCCLPHGTT 117 (381)
T ss_pred cEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCc-cccCccccceecCCHHHhcCCCEEEEcCCHHHH
Confidence 47999999999999999998876 56888877532 1111111111 011101000000110001358999999987665
Q ss_pred cccccccCCCcEEEeecC
Q 020314 233 STFEPNLGTTGKVIDFNP 250 (327)
Q Consensus 233 ~~~~~~l~~~G~~v~~g~ 250 (327)
......+..+-++|+++.
T Consensus 118 ~~i~~~~~~g~~VIDlSs 135 (381)
T PLN02968 118 QEIIKALPKDLKIVDLSA 135 (381)
T ss_pred HHHHHHHhCCCEEEEcCc
Confidence 555555566667888763
No 404
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=92.63 E-value=0.24 Score=41.82 Aligned_cols=35 Identities=20% Similarity=0.162 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC
Confidence 57789999999999999998888889999988864
No 405
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.62 E-value=0.43 Score=44.28 Aligned_cols=70 Identities=20% Similarity=0.207 Sum_probs=46.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cH----HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NI----ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINC 226 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~----~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 226 (327)
.+++|+|+| .|.+|+.+++.+...|++|++++... .. +.+.++|.. ++..+..+ . ..+++|+|+.+
T Consensus 4 ~~k~v~iiG-~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~-~-----~~~~~d~vv~~ 75 (450)
T PRK14106 4 KGKKVLVVG-AGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIE-LVLGEYPE-E-----FLEGVDLVVVS 75 (450)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCcch-h-----HhhcCCEEEEC
Confidence 578899999 56699999999999999999888542 22 223344544 22111111 1 11358999999
Q ss_pred CCCC
Q 020314 227 VTGI 230 (327)
Q Consensus 227 ~g~~ 230 (327)
+|..
T Consensus 76 ~g~~ 79 (450)
T PRK14106 76 PGVP 79 (450)
T ss_pred CCCC
Confidence 8853
No 406
>PRK09242 tropinone reductase; Provisional
Probab=92.57 E-value=0.3 Score=41.37 Aligned_cols=35 Identities=23% Similarity=0.138 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+|+++++|...++.+...|++|+.+.++
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 57899999999999999999998899999988864
No 407
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=92.57 E-value=0.93 Score=39.27 Aligned_cols=34 Identities=6% Similarity=0.079 Sum_probs=27.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~ 187 (327)
++++++|.| +|+.+.+++..+...|+ +++.+.|+
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt 157 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRR 157 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 567899999 68889987777777887 77777765
No 408
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=92.54 E-value=0.2 Score=41.57 Aligned_cols=72 Identities=25% Similarity=0.201 Sum_probs=44.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHH-HHH-hcCCCEE-EeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 157 ILITAASGAVGLYAVQLAKLGNTHVTATCGARNIE-LVK-SLGADEV-LDYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~-~~~-~lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
|||+||+|-+|..++..+...|.+|++..+..+.. ... ....... .|..+.+ ...+......+|.||++.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~-~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKE-QLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHH-HHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccc-cccccccccCceEEEEeecc
Confidence 79999999999999999999999999888654333 222 2222111 2222211 11111112258999998885
No 409
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=92.54 E-value=0.34 Score=37.84 Aligned_cols=33 Identities=27% Similarity=0.267 Sum_probs=25.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNT-HVTATCGA 187 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~ 187 (327)
++++|+||++++|...++.+...|+ +|+.+.++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec
Confidence 3699999999999988877777777 55555555
No 410
>PRK10637 cysG siroheme synthase; Provisional
Probab=92.53 E-value=0.78 Score=42.63 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 230 (327)
.+.+|||.| .|.++.-=++.+...|++|++++.. +....+...|.-..+. .+.....+ .++++||-+++++
T Consensus 11 ~~~~vlvvG-gG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~-~~~~~~dl-----~~~~lv~~at~d~ 83 (457)
T PRK10637 11 RDRDCLLVG-GGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVE-GPFDESLL-----DTCWLAIAATDDD 83 (457)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChHHh-----CCCEEEEECCCCH
Confidence 688999999 6888887677777789999888743 2333232223222221 11111111 3588999999887
Q ss_pred cccccc-cccCCCcEEEeecCCc
Q 020314 231 PWSTFE-PNLGTTGKVIDFNPSP 252 (327)
Q Consensus 231 ~~~~~~-~~l~~~G~~v~~g~~~ 252 (327)
.++..+ ...+..|.++.+...+
T Consensus 84 ~~n~~i~~~a~~~~~lvN~~d~~ 106 (457)
T PRK10637 84 AVNQRVSEAAEARRIFCNVVDAP 106 (457)
T ss_pred HHhHHHHHHHHHcCcEEEECCCc
Confidence 755443 4444567777766543
No 411
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.52 E-value=0.31 Score=41.40 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=30.4
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAA--SGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~--~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+|+ ++++|.+.++.+...|++|+.+.++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~ 42 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFG 42 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCc
Confidence 5678999998 7999999998888899999888754
No 412
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=92.47 E-value=2.2 Score=36.98 Aligned_cols=96 Identities=21% Similarity=0.205 Sum_probs=65.8
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||.....+..| +..++. -.|++|+|.|.+..+|.=+..++...|++|+..-+. ..++.
T Consensus 146 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~-------------- 206 (299)
T PLN02516 146 FLPCTPKGCLELL-SRSGIP----IKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPES-------------- 206 (299)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH--------------
Confidence 4566655555555 444553 479999999999999999999999889988766432 22211
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|+++-++|.+. -.-.+.++++..++++|...
T Consensus 207 ----~~-----~~ADIvv~AvGk~~-~i~~~~vk~gavVIDvGin~ 242 (299)
T PLN02516 207 ----IV-----READIVIAAAGQAM-MIKGDWIKPGAAVIDVGTNA 242 (299)
T ss_pred ----HH-----hhCCEEEEcCCCcC-ccCHHHcCCCCEEEEeeccc
Confidence 00 34788888888653 22246788898999998653
No 413
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=92.47 E-value=0.44 Score=39.44 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-------CcH--HHHHhcCCCEE---------EeCC-------C
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-------RNI--ELVKSLGADEV---------LDYK-------T 206 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-------~~~--~~~~~lg~~~v---------~~~~-------~ 206 (327)
+...|+|.| -||+|.+++..+-..|. ++..++-+ .|+ ++....|..++ +|+. .
T Consensus 29 ~~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 456799999 89999999999999997 66665421 221 22223332211 1111 0
Q ss_pred CC-cccccCCCCCcccEEEeCCCCCc--ccccccccCCCcEEEeecCC
Q 020314 207 PD-GAALKSPSGRKYDAVINCVTGIP--WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 207 ~~-~~~~~~~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~ 251 (327)
.- .+..+..-..++|+|+||.-+-. ...+..|.+..=.+|..+..
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga 155 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA 155 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence 00 11222233458999999997543 33333455555566666543
No 414
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=92.45 E-value=0.26 Score=41.42 Aligned_cols=36 Identities=19% Similarity=0.115 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++.+++|+|++|++|...++.+...|++|+.+++.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 578899999999999999888888889999988864
No 415
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=92.43 E-value=0.057 Score=46.69 Aligned_cols=141 Identities=18% Similarity=0.136 Sum_probs=73.8
Q ss_pred CCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHH--HHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314 88 FKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH--QALTQSLGVKLDGSGQQKNILITAASGA 165 (327)
Q Consensus 88 ~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~--~al~~~~~~~~~~~~~~~~vlV~g~~g~ 165 (327)
+++|+|.+..+ .|.++-.-+...++.+.+++.+=. ...-+|.. ..|.+. . +++++||=.| .|
T Consensus 108 ~~vg~~~~I~P---~w~~~~~~~~~~~I~idPg~AFGT----G~H~TT~lcl~~l~~~--~-----~~g~~vLDvG--~G 171 (295)
T PF06325_consen 108 IRVGDRLVIVP---SWEEYPEPPDEIVIEIDPGMAFGT----GHHPTTRLCLELLEKY--V-----KPGKRVLDVG--CG 171 (295)
T ss_dssp EEECTTEEEEE---TT----SSTTSEEEEESTTSSS-S----SHCHHHHHHHHHHHHH--S-----STTSEEEEES---T
T ss_pred EEECCcEEEEC---CCcccCCCCCcEEEEECCCCcccC----CCCHHHHHHHHHHHHh--c-----cCCCEEEEeC--Cc
Confidence 66788666544 555552234455666666544322 22222222 233223 2 6889999888 34
Q ss_pred HHHHHHHHHHhCCC-eEEEEec-CCc----HHHHHhcCCC-EEEeCCCCCcccccCCCCCcccEEEeCCCCCc----ccc
Q 020314 166 VGLYAVQLAKLGNT-HVTATCG-ARN----IELVKSLGAD-EVLDYKTPDGAALKSPSGRKYDAVINCVTGIP----WST 234 (327)
Q Consensus 166 ~G~~~~~la~~~g~-~v~~~~~-~~~----~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~ 234 (327)
.|.+++..++ +|+ +|++++. +.. ++.++..+.. .+...... ......||+|+-+.-.+. ...
T Consensus 172 SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~------~~~~~~~dlvvANI~~~vL~~l~~~ 244 (295)
T PF06325_consen 172 SGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE------DLVEGKFDLVVANILADVLLELAPD 244 (295)
T ss_dssp TSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS------CTCCS-EEEEEEES-HHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec------ccccccCCEEEECCCHHHHHHHHHH
Confidence 5666666555 477 8999984 422 2222222221 22111111 111267999998776543 445
Q ss_pred cccccCCCcEEEeecCC
Q 020314 235 FEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 235 ~~~~l~~~G~~v~~g~~ 251 (327)
..++++++|.++..|-.
T Consensus 245 ~~~~l~~~G~lIlSGIl 261 (295)
T PF06325_consen 245 IASLLKPGGYLILSGIL 261 (295)
T ss_dssp CHHHEEEEEEEEEEEEE
T ss_pred HHHhhCCCCEEEEcccc
Confidence 66789999999987744
No 416
>PRK00811 spermidine synthase; Provisional
Probab=92.42 E-value=0.29 Score=42.32 Aligned_cols=92 Identities=18% Similarity=0.180 Sum_probs=53.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhc----C--C--C---EEEeCCCCCcccccCCCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSL----G--A--D---EVLDYKTPDGAALKSPSGR 218 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~l----g--~--~---~v~~~~~~~~~~~~~~~~~ 218 (327)
.+.++||+.| +|.|..+..++++.+. +|+++.- ++-.+.+++. + . + .++..+. ...+.. ..+
T Consensus 75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da--~~~l~~-~~~ 149 (283)
T PRK00811 75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDG--IKFVAE-TEN 149 (283)
T ss_pred CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECch--HHHHhh-CCC
Confidence 4667899999 3457778888887665 7888874 4444444432 1 1 1 1111111 111221 345
Q ss_pred cccEEEeCCCCC-----------cccccccccCCCcEEEee
Q 020314 219 KYDAVINCVTGI-----------PWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 219 ~~d~v~d~~g~~-----------~~~~~~~~l~~~G~~v~~ 248 (327)
.+|+|+--...+ .++.+.+.|+++|.++.-
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 799998543221 135667899999999864
No 417
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=92.39 E-value=0.35 Score=42.25 Aligned_cols=31 Identities=10% Similarity=0.163 Sum_probs=29.0
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHhCCCeEEE
Q 020314 153 QQKNILITAA--SGAVGLYAVQLAKLGNTHVTA 183 (327)
Q Consensus 153 ~~~~vlV~g~--~g~~G~~~~~la~~~g~~v~~ 183 (327)
.|+++||+|+ ++++|.+.++.+...|++|+.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV 40 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 6889999999 799999999999999999988
No 418
>PRK12743 oxidoreductase; Provisional
Probab=92.36 E-value=0.37 Score=40.82 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=29.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
++++||+||++++|..+++.+...|++|+.+.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~ 34 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWH 34 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 457999999999999999999889999988763
No 419
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.32 E-value=0.64 Score=43.56 Aligned_cols=70 Identities=17% Similarity=0.117 Sum_probs=47.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--c----HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--N----IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIN 225 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~----~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d 225 (327)
..+++|+|.| .|++|+.++.+++..|.+|+++...+ . .+.+++.|......... . ....+|+|+-
T Consensus 14 ~~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~-----~~~~~D~Vv~ 84 (480)
T PRK01438 14 WQGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP---T-----LPEDTDLVVT 84 (480)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c-----ccCCCCEEEE
Confidence 3567899999 79999999999999999998887332 1 23455667554332211 1 1134899998
Q ss_pred CCCCC
Q 020314 226 CVTGI 230 (327)
Q Consensus 226 ~~g~~ 230 (327)
+.|-+
T Consensus 85 s~Gi~ 89 (480)
T PRK01438 85 SPGWR 89 (480)
T ss_pred CCCcC
Confidence 88854
No 420
>PRK06914 short chain dehydrogenase; Provisional
Probab=92.25 E-value=0.3 Score=41.95 Aligned_cols=34 Identities=26% Similarity=0.195 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++||+||+|++|...++.+...|++|++++++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCC
Confidence 5679999999999999998888889999998864
No 421
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=92.25 E-value=0.46 Score=41.94 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=28.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~ 187 (327)
++.+|||+||+|.+|...++.+...| .+|++.++.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~ 39 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD 39 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 46789999999999999888777665 578877754
No 422
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=92.25 E-value=0.28 Score=41.23 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+.++||+||+|.+|...+..+...|++|++++++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999998888889999998865
No 423
>PRK07024 short chain dehydrogenase; Provisional
Probab=92.24 E-value=0.35 Score=40.94 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=29.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+.+++|+||+|++|...++.+...|++|+.+.+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARR 35 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3579999999999999998888889999988854
No 424
>PLN00198 anthocyanidin reductase; Provisional
Probab=92.23 E-value=0.56 Score=41.59 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+.+|||+||+|-+|...++.+...|++|++++++
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~ 42 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRD 42 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 47789999999999999999888889999887754
No 425
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=92.22 E-value=0.34 Score=43.14 Aligned_cols=92 Identities=18% Similarity=0.038 Sum_probs=53.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcH-HHHHhcC-CCEE--EeCCCCCcccccCCCCCcccEEEeCCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNI-ELVKSLG-ADEV--LDYKTPDGAALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~-~~~~~lg-~~~v--~~~~~~~~~~~~~~~~~~~d~v~d~~g 228 (327)
-+|+|.|++|.+|...++++... +.+++++++. ++. .+.+..+ .... ...++.+. . ...++|+||-|++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~--~---~~~~vD~Vf~alP 77 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDP--E---ILAGADVVFLALP 77 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCH--H---HhcCCCEEEECCC
Confidence 36999999999999888877755 6788887753 221 1222221 0000 01111111 1 1135899999998
Q ss_pred CCc-ccccccccCCCcEEEeecCC
Q 020314 229 GIP-WSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 229 ~~~-~~~~~~~l~~~G~~v~~g~~ 251 (327)
... .+.+..+++.+-.+|+.+..
T Consensus 78 ~~~~~~~v~~a~~aG~~VID~S~~ 101 (343)
T PRK00436 78 HGVSMDLAPQLLEAGVKVIDLSAD 101 (343)
T ss_pred cHHHHHHHHHHHhCCCEEEECCcc
Confidence 766 44444555555578887643
No 426
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.20 E-value=2.5 Score=36.57 Aligned_cols=96 Identities=15% Similarity=0.100 Sum_probs=64.7
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|+|.|.+..+|.=+..++...|++|+..-+. ..++..
T Consensus 137 ~~PcTp~aii~lL-~~~~i~----l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~------------- 198 (297)
T PRK14186 137 LRSCTPAGVMRLL-RSQQID----IAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASI------------- 198 (297)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 3455544444444 444552 478999999999999999999999899988765432 222110
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+ .-.+.++++..+|++|...
T Consensus 199 -----~-----~~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin~ 233 (297)
T PRK14186 199 -----T-----READILVAAAGRPNL-IGAEMVKPGAVVVDVGIHR 233 (297)
T ss_pred -----H-----hhCCEEEEccCCcCc-cCHHHcCCCCEEEEecccc
Confidence 0 237888888886653 2256788888888888553
No 427
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=92.19 E-value=0.22 Score=42.98 Aligned_cols=66 Identities=24% Similarity=0.125 Sum_probs=41.9
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 157 ILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
|||+||+|-+|..+++.+...|.+|+++++. .+....... .+.+.... ...... .++|+||++.+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~--~~~~~~--~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE---GYKPWAPL--AESEAL--EGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce---eeeccccc--chhhhc--CCCCEEEECCCC
Confidence 6899999999999999888889999999864 332211111 11111111 111111 458999999974
No 428
>PLN03139 formate dehydrogenase; Provisional
Probab=92.18 E-value=0.36 Score=43.52 Aligned_cols=89 Identities=18% Similarity=0.110 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP 231 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 231 (327)
.|++|.|+| .|.+|...++.++.+|++|++..+.. ..+..+..|.... .+ -.+.+ ...|+|+.+.....
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~---~~-l~ell-----~~sDvV~l~lPlt~ 267 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE---ED-LDAML-----PKCDVVVINTPLTE 267 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec---CC-HHHHH-----hhCCEEEEeCCCCH
Confidence 788999999 89999999999999999998877543 3344444553321 11 01122 23688887776321
Q ss_pred -----c-cccccccCCCcEEEeecCC
Q 020314 232 -----W-STFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 232 -----~-~~~~~~l~~~G~~v~~g~~ 251 (327)
+ ...+..|+++..+|.++..
T Consensus 268 ~T~~li~~~~l~~mk~ga~lIN~aRG 293 (386)
T PLN03139 268 KTRGMFNKERIAKMKKGVLIVNNARG 293 (386)
T ss_pred HHHHHhCHHHHhhCCCCeEEEECCCC
Confidence 1 2466788888888887754
No 429
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=92.17 E-value=2.2 Score=37.62 Aligned_cols=95 Identities=24% Similarity=0.232 Sum_probs=65.9
Q ss_pred cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCC
Q 020314 129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTP 207 (327)
Q Consensus 129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~ 207 (327)
.||........| +..++. -.|++++|.|-+..+|.=+..++...++.|+..-+. ..++.
T Consensus 194 ~PCTp~avi~LL-~~~~i~----l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~--------------- 253 (345)
T PLN02897 194 VSCTPKGCVELL-IRSGVE----IAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQ--------------- 253 (345)
T ss_pred cCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHH---------------
Confidence 455544444444 444542 479999999999999999999999889988655432 22211
Q ss_pred CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|+++-++|.+.+ --.+.++++..+|++|-..
T Consensus 254 ---~~-----~~ADIvIsAvGkp~~-v~~d~vk~GavVIDVGin~ 289 (345)
T PLN02897 254 ---IT-----RKADIVIAAAGIPNL-VRGSWLKPGAVVIDVGTTP 289 (345)
T ss_pred ---HH-----hhCCEEEEccCCcCc-cCHHHcCCCCEEEEccccc
Confidence 00 347999999997764 3356889999999999653
No 430
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=92.14 E-value=0.32 Score=41.00 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=29.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++||+|++|++|...+..+...|++|+++++.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLG 34 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 479999999999999998888889999998865
No 431
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=92.12 E-value=0.25 Score=42.56 Aligned_cols=32 Identities=34% Similarity=0.328 Sum_probs=28.4
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 48999999999999999998889999988753
No 432
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=92.12 E-value=0.33 Score=41.31 Aligned_cols=35 Identities=26% Similarity=0.237 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+|++|++|.+.++.+...|++|+.+++.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999999998899999988754
No 433
>PRK06181 short chain dehydrogenase; Provisional
Probab=92.11 E-value=0.3 Score=41.45 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=29.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++||+||+|++|..+++.+...|++|++++++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 469999999999999999888889999998865
No 434
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=92.09 E-value=0.27 Score=43.85 Aligned_cols=47 Identities=26% Similarity=0.189 Sum_probs=36.8
Q ss_pred HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
|||.-+.....+ ++.+|||+||+|=+|..++..+...|.+|+++++.
T Consensus 2 ~~~~~~~~~~~~------~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 2 TAYEELRTKLVL------APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred chhhhhhhcccc------cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456555333333 56789999999999999999999889999999853
No 435
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=92.09 E-value=0.3 Score=43.34 Aligned_cols=88 Identities=17% Similarity=0.131 Sum_probs=49.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNT---HVTATCGARN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~---~v~~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 230 (327)
-+|+|.||+|-+|...++++...+. ++.+.++.+. -+...-.+.+..+. +.+...+ .++|+||.|+|..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~--d~~~~~~-----~~vDvVf~A~g~g 74 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVE--DLTTFDF-----SGVDIALFSAGGS 74 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEe--eCCHHHH-----cCCCEEEECCChH
Confidence 3699999999999999999987543 5566664321 11111112221221 1110111 3589999999865
Q ss_pred c-ccccccccCCCcEEEeec
Q 020314 231 P-WSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 231 ~-~~~~~~~l~~~G~~v~~g 249 (327)
. .+.+-+++..+..+|+++
T Consensus 75 ~s~~~~~~~~~~G~~VIDlS 94 (334)
T PRK14874 75 VSKKYAPKAAAAGAVVIDNS 94 (334)
T ss_pred HHHHHHHHHHhCCCEEEECC
Confidence 4 333334445555666654
No 436
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.08 E-value=2.4 Score=36.49 Aligned_cols=96 Identities=16% Similarity=0.167 Sum_probs=64.7
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh----CCCeEEEEecC-CcHHHHHhcCCCEEE
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL----GNTHVTATCGA-RNIELVKSLGADEVL 202 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~----~g~~v~~~~~~-~~~~~~~~lg~~~v~ 202 (327)
..||.....+..| +..++. -.|++++|.|.+..+|.=...++.. .+++|+...+. ..+.. .
T Consensus 136 ~~PcTp~av~~lL-~~~~i~----l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~--~------- 201 (286)
T PRK14184 136 FRPCTPAGVMTLL-ERYGLS----PAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAE--E------- 201 (286)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHH--H-------
Confidence 3465555555455 555653 4789999999999999988888887 77888765532 22211 0
Q ss_pred eCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 203 DYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
. +..|+++-++|.+.+ -.-+.++++..+|++|...
T Consensus 202 ---------~-----~~ADIVI~AvG~p~l-i~~~~vk~GavVIDVGi~~ 236 (286)
T PRK14184 202 ---------C-----READFLFVAIGRPRF-VTADMVKPGAVVVDVGINR 236 (286)
T ss_pred ---------H-----HhCCEEEEecCCCCc-CCHHHcCCCCEEEEeeeec
Confidence 0 237888888887664 2235678888999988543
No 437
>PLN02240 UDP-glucose 4-epimerase
Probab=92.08 E-value=0.45 Score=42.36 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
.+++|||+||+|.+|...++.+...|.+|+++++
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~ 37 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDN 37 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4678999999999999999888888999998874
No 438
>PRK07402 precorrin-6B methylase; Provisional
Probab=92.03 E-value=1.2 Score=36.15 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=52.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHH----HhcCCCE--EEeCCCCCcccccCCCCCcccE-
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELV----KSLGADE--VLDYKTPDGAALKSPSGRKYDA- 222 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~----~~lg~~~--v~~~~~~~~~~~~~~~~~~~d~- 222 (327)
+++++||=.| .|.|..++.+++.. +.+|++++. ++..+.+ +.++.+. ++..+.. ....... ..+|.
T Consensus 39 ~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~--~~~~~~~-~~~d~v 113 (196)
T PRK07402 39 EPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAP--ECLAQLA-PAPDRV 113 (196)
T ss_pred CCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchH--HHHhhCC-CCCCEE
Confidence 6788887776 44566667777654 569999985 4443333 3455433 2221111 1111111 12344
Q ss_pred EEeCCCC--CcccccccccCCCcEEEeecCC
Q 020314 223 VINCVTG--IPWSTFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 223 v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~ 251 (327)
+++.... ..+..+.+.|+++|+++.....
T Consensus 114 ~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 144 (196)
T PRK07402 114 CIEGGRPIKEILQAVWQYLKPGGRLVATASS 144 (196)
T ss_pred EEECCcCHHHHHHHHHHhcCCCeEEEEEeec
Confidence 4443222 2267778899999999877654
No 439
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=92.01 E-value=0.7 Score=40.37 Aligned_cols=45 Identities=27% Similarity=0.366 Sum_probs=36.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-Cc---HHHHHhcC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RN---IELVKSLG 197 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~---~~~~~~lg 197 (327)
.+..|+|+||+|=+|...+..+...|++|.+++|+ ++ .+.++++.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~ 53 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLE 53 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcc
Confidence 56789999999999999999999999999999964 32 23455554
No 440
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.01 E-value=0.37 Score=42.22 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
-.+.+++|+|+++|+|..++..+...|++|+.++++.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~ 69 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNE 69 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCH
Confidence 3667899999999999999999999999999999763
No 441
>PRK07774 short chain dehydrogenase; Provisional
Probab=92.00 E-value=0.34 Score=40.69 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+.+++|+|++|++|...++.+...|++|+.+.+.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999998888889999998865
No 442
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=92.00 E-value=0.44 Score=40.42 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++||+||++++|...++.+...|++++.+.+.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999999988877653
No 443
>PRK05855 short chain dehydrogenase; Validated
Probab=91.98 E-value=0.31 Score=46.65 Aligned_cols=36 Identities=17% Similarity=0.063 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
..+.++||+||+|++|...++.+...|++|+.++++
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~ 348 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDID 348 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356789999999999999998888899999888865
No 444
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=91.96 E-value=0.32 Score=40.47 Aligned_cols=79 Identities=18% Similarity=0.155 Sum_probs=56.6
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH-HH-hcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcc
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL-VK-SLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW 232 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~-~~-~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 232 (327)
+++|.| .|.+|...++.+...|..|+.+... ++.+. +. .+.. +++..+..+.+.++..+-..+|.++-++|.+..
T Consensus 2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~ 79 (225)
T COG0569 2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATDEDVLEEAGIDDADAVVAATGNDEV 79 (225)
T ss_pred EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence 478888 8999999999999999999999855 45444 22 3444 344455555556666666779999999998654
Q ss_pred cccc
Q 020314 233 STFE 236 (327)
Q Consensus 233 ~~~~ 236 (327)
+..+
T Consensus 80 N~i~ 83 (225)
T COG0569 80 NSVL 83 (225)
T ss_pred HHHH
Confidence 4333
No 445
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=91.96 E-value=0.28 Score=43.09 Aligned_cols=71 Identities=21% Similarity=0.267 Sum_probs=43.5
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
+|+|+|++|.+|..+++.+...|.+|+++.+. ++.......+...+. |..+.+ .+.+.. .++|+||++.+.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~l~~~~--~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPA-SLRKAV--AGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHH-HHHHHH--hCCCEEEEecee
Confidence 59999999999999999888889999999864 332222222322221 222211 111111 247999988753
No 446
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=91.94 E-value=2.3 Score=35.20 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
-.+.+|+|.| .|.+|..+++++...|++++++++
T Consensus 21 l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD 54 (217)
T cd05211 21 LEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSD 54 (217)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEc
Confidence 3788999999 899999999999999998888774
No 447
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=91.91 E-value=0.54 Score=41.25 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP 231 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 231 (327)
-.+++|.|+| .|.+|...++.++.+|++|++..+..+.. -+........+ -.+.+ ...|+|+.+.....
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~----~~~~~~~~~~~-l~e~l-----~~aDvvv~~lPlt~ 202 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW----PGVQSFAGREE-LSAFL-----SQTRVLINLLPNTP 202 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC----CCceeeccccc-HHHHH-----hcCCEEEECCCCCH
Confidence 3788999999 89999999999999999999887532211 01111110000 01111 24789988887432
Q ss_pred -----c-cccccccCCCcEEEeecCCc
Q 020314 232 -----W-STFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 232 -----~-~~~~~~l~~~G~~v~~g~~~ 252 (327)
+ ...++.|+++..+|.++...
T Consensus 203 ~T~~li~~~~l~~mk~ga~lIN~aRG~ 229 (312)
T PRK15469 203 ETVGIINQQLLEQLPDGAYLLNLARGV 229 (312)
T ss_pred HHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence 1 24677899999999887553
No 448
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=91.83 E-value=2.5 Score=37.51 Aligned_cols=95 Identities=22% Similarity=0.264 Sum_probs=65.8
Q ss_pred cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCC
Q 020314 129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTP 207 (327)
Q Consensus 129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~ 207 (327)
.||........| +..++. -.|++|+|.|.+..+|.=+..++...++.|+..-+. ..++.
T Consensus 211 ~PCTp~avielL-~~y~i~----l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~--------------- 270 (364)
T PLN02616 211 VPCTPKGCIELL-HRYNVE----IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEE--------------- 270 (364)
T ss_pred CCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHH---------------
Confidence 455544444444 444552 389999999999999999999999889888765422 22211
Q ss_pred CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|+++-++|.+.+ --.+.++++..+|++|-..
T Consensus 271 ---~~-----r~ADIVIsAvGkp~~-i~~d~vK~GAvVIDVGIn~ 306 (364)
T PLN02616 271 ---IT-----READIIISAVGQPNM-VRGSWIKPGAVVIDVGINP 306 (364)
T ss_pred ---HH-----hhCCEEEEcCCCcCc-CCHHHcCCCCEEEeccccc
Confidence 00 347899999987764 3356788999999999653
No 449
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=91.82 E-value=0.36 Score=42.29 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=27.3
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
+|||+||+|.+|..+++.+...|.+|+++.+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~ 31 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDN 31 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 4899999999999999988888999887764
No 450
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=91.79 E-value=2.5 Score=35.18 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCe---EEEEecC-----Cc--------HHHHHhcCCCEEEeCCCCCc-ccccCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTH---VTATCGA-----RN--------IELVKSLGADEVLDYKTPDG-AALKSP 215 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~---v~~~~~~-----~~--------~~~~~~lg~~~v~~~~~~~~-~~~~~~ 215 (327)
++++++|.| +|+.|.+++..+...|++ ++.+.+. +| .++++.++... .+ .+. +.+
T Consensus 24 ~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~l~~~l--- 95 (226)
T cd05311 24 EEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GTLKEAL--- 95 (226)
T ss_pred cCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CCHHHHH---
Confidence 678999999 799999999888888975 7766654 23 22344443211 11 111 111
Q ss_pred CCCcccEEEeCCCCCcc-cccccccCCCcEEEeecCC
Q 020314 216 SGRKYDAVINCVTGIPW-STFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 216 ~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~ 251 (327)
.++|+++++++...+ ...++.+.++..+..+..+
T Consensus 96 --~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 96 --KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred --hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCCC
Confidence 238999999984333 3556667677666655543
No 451
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.77 E-value=0.38 Score=40.16 Aligned_cols=35 Identities=26% Similarity=0.198 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++.+++|+|++|++|..++..+...|++|+.++++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~ 40 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLART 40 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999999998888899999998865
No 452
>PLN03075 nicotianamine synthase; Provisional
Probab=91.76 E-value=0.38 Score=41.56 Aligned_cols=96 Identities=16% Similarity=0.169 Sum_probs=58.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHHHhc-----CCCEEEeCCCCCcccccCCCCCcccEE
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELVKSL-----GADEVLDYKTPDGAALKSPSGRKYDAV 223 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~~~l-----g~~~v~~~~~~~~~~~~~~~~~~~d~v 223 (327)
.++++|+-.| +|+.|+.++.+++.+ +.+++.++.+ +..+.+++. +...-+.....+.... ....+.||+|
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~-~~~l~~FDlV 199 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDV-TESLKEYDVV 199 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhc-ccccCCcCEE
Confidence 3778899999 899999888888644 4588898844 444444432 2221112211111111 1112569999
Q ss_pred EeCC------CCC--cccccccccCCCcEEEeec
Q 020314 224 INCV------TGI--PWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 224 ~d~~------g~~--~~~~~~~~l~~~G~~v~~g 249 (327)
|-.+ ..+ .+....+.|+++|.++.-.
T Consensus 200 F~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 200 FLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 8764 121 2678888999999998654
No 453
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=91.74 E-value=0.38 Score=40.66 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++++|+|+++++|...++.+...|++|+.+.+.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~ 44 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRN 44 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCC
Confidence 68899999999999999998888889999998865
No 454
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=91.72 E-value=0.36 Score=40.99 Aligned_cols=91 Identities=18% Similarity=0.154 Sum_probs=54.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCCC---EEEeCCCCCcccccCCCCCcccEEE
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGAD---EVLDYKTPDGAALKSPSGRKYDAVI 224 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~~---~v~~~~~~~~~~~~~~~~~~~d~v~ 224 (327)
++.+||=.| .|.|..+..+++. |.+|++++. ++..+.++ ..|.. .++..+. ........+.+|+|+
T Consensus 44 ~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~---~~l~~~~~~~fD~V~ 117 (255)
T PRK11036 44 RPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAA---QDIAQHLETPVDLIL 117 (255)
T ss_pred CCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCH---HHHhhhcCCCCCEEE
Confidence 556888887 4567788888875 789999984 44444443 33321 1221111 111111235699998
Q ss_pred eCCC-----CC--cccccccccCCCcEEEeec
Q 020314 225 NCVT-----GI--PWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 225 d~~g-----~~--~~~~~~~~l~~~G~~v~~g 249 (327)
.... .+ .+..+.+.|+|+|+++.+-
T Consensus 118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 5432 22 2677888999999997654
No 455
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=91.66 E-value=0.39 Score=40.16 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=29.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
++.++||+|++|++|...++.+...|++|+++.+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~ 37 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYA 37 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 4578999999999999999999888999877764
No 456
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=91.64 E-value=0.55 Score=41.41 Aligned_cols=88 Identities=15% Similarity=0.083 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHH-hCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-C
Q 020314 153 QQKNILITAASGAVGLYAVQLAK-LGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-I 230 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~ 230 (327)
.|+++.|+| .|.+|...++.++ .+|++|++..+..+.+....++.... + -.+++ ...|+|.-+..- +
T Consensus 144 ~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~----~-l~ell-----~~sDvv~lh~plt~ 212 (323)
T PRK15409 144 HHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYC----D-LDTLL-----QESDFVCIILPLTD 212 (323)
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEec----C-HHHHH-----HhCCEEEEeCCCCh
Confidence 788999999 8999999999998 89999997765433332233443211 1 01122 236788776652 2
Q ss_pred c----c-cccccccCCCcEEEeecCC
Q 020314 231 P----W-STFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 231 ~----~-~~~~~~l~~~G~~v~~g~~ 251 (327)
. + ...++.|+++..+|.++..
T Consensus 213 ~T~~li~~~~l~~mk~ga~lIN~aRG 238 (323)
T PRK15409 213 ETHHLFGAEQFAKMKSSAIFINAGRG 238 (323)
T ss_pred HHhhccCHHHHhcCCCCeEEEECCCc
Confidence 1 2 2566788888888887644
No 457
>PRK08251 short chain dehydrogenase; Provisional
Probab=91.62 E-value=0.44 Score=39.99 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=29.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++++|+||+|++|...++.+...|++|+.+.+.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~ 35 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARR 35 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4579999999999999888887789999888754
No 458
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=91.61 E-value=1.6 Score=35.85 Aligned_cols=92 Identities=16% Similarity=0.086 Sum_probs=51.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINC 226 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 226 (327)
+++++||-.|+ |.|..+..+++.. .++++++.. +..+ .++..+...+--...+..... ...+.||+|+-.
T Consensus 77 ~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~I~~~ 151 (212)
T PRK00312 77 KPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGW--PAYAPFDRILVT 151 (212)
T ss_pred CCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCC--CcCCCcCEEEEc
Confidence 78899999984 3455555566553 488888743 3222 233445432211111111111 112469998865
Q ss_pred CCC-CcccccccccCCCcEEEee
Q 020314 227 VTG-IPWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 227 ~g~-~~~~~~~~~l~~~G~~v~~ 248 (327)
..- .......+.|+++|+++..
T Consensus 152 ~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 152 AAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred cCchhhhHHHHHhcCCCcEEEEE
Confidence 443 2355677899999998754
No 459
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=91.61 E-value=1.4 Score=39.70 Aligned_cols=56 Identities=23% Similarity=0.253 Sum_probs=40.4
Q ss_pred hhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 124 ~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
.+|.+....+++- .++. ..+.. -+|.+|.|.| .|.+|..+++.+...|++|++++.
T Consensus 183 ~~aTg~Gv~~~~~-~a~~-~~g~~----l~G~rVaVQG-~GNVg~~aa~~l~~~GAkvva~sd 238 (411)
T COG0334 183 SEATGYGVFYAIR-EALK-ALGDD----LEGARVAVQG-FGNVGQYAAEKLHELGAKVVAVSD 238 (411)
T ss_pred CcccceehHHHHH-HHHH-HcCCC----cCCCEEEEEC-ccHHHHHHHHHHHHcCCEEEEEEc
Confidence 3454455454444 4553 33321 2899999999 899999999999988999999874
No 460
>PRK09135 pteridine reductase; Provisional
Probab=91.56 E-value=0.39 Score=40.22 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++||+|++|++|..+++.+...|++|+.+++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 45789999999999999998888889999998854
No 461
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=91.55 E-value=1.3 Score=38.47 Aligned_cols=34 Identities=15% Similarity=0.119 Sum_probs=28.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~ 187 (327)
++++++|+|+ |++|.+++..+...|++ |+.+.++
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~ 159 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIK 159 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 5788999995 89999998888888985 8777764
No 462
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=91.55 E-value=0.62 Score=30.97 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=22.9
Q ss_pred CCCCeEEEEcCCChHHHHHH-HHHHhCCCeEEEEe
Q 020314 152 GQQKNILITAASGAVGLYAV-QLAKLGNTHVTATC 185 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~-~la~~~g~~v~~~~ 185 (327)
...++|||.|++++.|++.- .+|-..|+..+.+.
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~ 71 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVS 71 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE
T ss_pred CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEe
Confidence 44588999999999999753 44446677888776
No 463
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=91.55 E-value=0.46 Score=41.84 Aligned_cols=89 Identities=17% Similarity=0.027 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC-CCc
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT-GIP 231 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~~ 231 (327)
.|+++-|.| .|.+|.+.++.++.+|++|....+..+.+..+.+++.++- . .+.+ ...|++.-+.+ .+.
T Consensus 145 ~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~----l-~ell-----~~sDii~l~~Plt~~ 213 (324)
T COG1052 145 RGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVD----L-DELL-----AESDIISLHCPLTPE 213 (324)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceecc----H-HHHH-----HhCCEEEEeCCCChH
Confidence 689999999 9999999999999999999999876553333445444331 1 1122 23577765444 322
Q ss_pred -----ccccccccCCCcEEEeecCCc
Q 020314 232 -----WSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 232 -----~~~~~~~l~~~G~~v~~g~~~ 252 (327)
-...++.|++++.+|.++...
T Consensus 214 T~hLin~~~l~~mk~ga~lVNtaRG~ 239 (324)
T COG1052 214 TRHLINAEELAKMKPGAILVNTARGG 239 (324)
T ss_pred HhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 235667899999999887543
No 464
>PRK07201 short chain dehydrogenase; Provisional
Probab=91.54 E-value=0.42 Score=46.68 Aligned_cols=35 Identities=23% Similarity=0.168 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+||+|++|..+++.+...|++|+++++.
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~ 404 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARN 404 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 46789999999999999998888889999998864
No 465
>PRK07578 short chain dehydrogenase; Provisional
Probab=91.53 E-value=0.52 Score=38.15 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=25.5
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
+++|+|+++++|...+..+... .+|+.+.++
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~ 32 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRS 32 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecC
Confidence 5899999999999888776655 888888754
No 466
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=91.50 E-value=0.86 Score=42.09 Aligned_cols=36 Identities=19% Similarity=0.132 Sum_probs=32.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++..+|||+||+|-+|..++..+...|.+|+++++.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 566789999999999999999888889999998853
No 467
>PLN02583 cinnamoyl-CoA reductase
Probab=91.45 E-value=0.42 Score=41.63 Aligned_cols=36 Identities=25% Similarity=0.285 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++|||+||+|.+|..+++.+...|++|+++.++
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 456789999999999999999998899999998863
No 468
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=91.45 E-value=1.2 Score=40.48 Aligned_cols=92 Identities=17% Similarity=0.220 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cC-Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GA-RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
++.++||.| +|-+|..++..+...|.+-+.++ ++ +| .++++++|... +..++... .. ..+|+||.+++.
T Consensus 177 ~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l~el~~----~l--~~~DvVissTsa 248 (414)
T COG0373 177 KDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VALEELLE----AL--AEADVVISSTSA 248 (414)
T ss_pred ccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecHHHHHH----hh--hhCCEEEEecCC
Confidence 788999999 79999999999999998666666 55 33 45788999443 22222111 11 248999999987
Q ss_pred Cc--c--cccccccCCCc--EEEeecCCc
Q 020314 230 IP--W--STFEPNLGTTG--KVIDFNPSP 252 (327)
Q Consensus 230 ~~--~--~~~~~~l~~~G--~~v~~g~~~ 252 (327)
+. + ......++..- -+++++.+.
T Consensus 249 ~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 249 PHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred CccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 64 1 12233444333 356777654
No 469
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=91.45 E-value=1.5 Score=41.67 Aligned_cols=92 Identities=14% Similarity=0.048 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI 230 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 230 (327)
++++++|.| +|++|.+++..+...|++++.+.++ ++.+ +++.++.. .+...+. ........|+++++++-.
T Consensus 378 ~~k~vlIlG-aGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~-----~~~~~~~~diiINtT~vG 450 (529)
T PLN02520 378 AGKLFVVIG-AGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLADL-----ENFHPEEGMILANTTSVG 450 (529)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHh-----hhhccccCeEEEecccCC
Confidence 567899999 5899999999999999988877654 3433 44455432 2222111 001112478999988633
Q ss_pred ccc------ccccccCCCcEEEeecCC
Q 020314 231 PWS------TFEPNLGTTGKVIDFNPS 251 (327)
Q Consensus 231 ~~~------~~~~~l~~~G~~v~~g~~ 251 (327)
... .....+++.+.++++-..
T Consensus 451 m~~~~~~~pl~~~~l~~~~~v~D~vY~ 477 (529)
T PLN02520 451 MQPNVDETPISKHALKHYSLVFDAVYT 477 (529)
T ss_pred CCCCCCCCcccHhhCCCCCEEEEeccC
Confidence 211 112345566666666543
No 470
>PRK12747 short chain dehydrogenase; Provisional
Probab=91.44 E-value=0.52 Score=39.73 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=29.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC 185 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~ 185 (327)
.+++++|+|+++++|.++++.+...|++|+...
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~ 35 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHY 35 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 467899999999999999999988999988764
No 471
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=91.43 E-value=0.4 Score=41.83 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=25.4
Q ss_pred eEEEEcCCChHHHHHHHHHHhCC--CeEEEEec
Q 020314 156 NILITAASGAVGLYAVQLAKLGN--THVTATCG 186 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~ 186 (327)
+|+|+||+|.+|..+++.+...| .+|++..+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~ 33 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDK 33 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecC
Confidence 48999999999999998777655 67887764
No 472
>PRK14982 acyl-ACP reductase; Provisional
Probab=91.42 E-value=0.52 Score=41.70 Aligned_cols=91 Identities=14% Similarity=0.143 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHH-hCCC-eEEEEecC-CcHHH-HHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314 153 QQKNILITAASGAVGLYAVQLAK-LGNT-HVTATCGA-RNIEL-VKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT 228 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~-~~g~-~v~~~~~~-~~~~~-~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 228 (327)
.+++|+|+||+|.+|..+++.+. ..|. +++.+.++ ++.+. ..+++...+.+. .+.+ ...|+|+.+++
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l----~~~l-----~~aDiVv~~ts 224 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSL----EEAL-----PEADIVVWVAS 224 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhH----HHHH-----ccCCEEEECCc
Confidence 67899999999999998887775 4565 77766654 34433 334432211110 1111 24899999888
Q ss_pred CCc-ccccccccCCCcEEEeecCCc
Q 020314 229 GIP-WSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 229 ~~~-~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.+. +..-.+.+++.-.+++++.+.
T Consensus 225 ~~~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 225 MPKGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred CCcCCcCCHHHhCCCeEEEEecCCC
Confidence 644 223334667777778888654
No 473
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=91.42 E-value=1.5 Score=37.96 Aligned_cols=34 Identities=9% Similarity=0.052 Sum_probs=27.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~ 187 (327)
++++++|.| +||.+.+++..+...|+ +++.+.++
T Consensus 126 ~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~ 160 (283)
T PRK14027 126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_pred CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 578899999 79999999988888998 66666655
No 474
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=91.40 E-value=1.8 Score=29.71 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=26.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG 186 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~ 186 (327)
-.+++++|.| .|.+|..+++.+...+. ++....+
T Consensus 21 ~~~~~v~i~G-~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLG-AGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3678899999 59999999998888754 5554433
No 475
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=91.39 E-value=0.73 Score=43.63 Aligned_cols=87 Identities=16% Similarity=0.065 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-c
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-P 231 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~ 231 (327)
.|++|.|+| .|.+|...++.++.+|++|++.++....+....+|...+ + + ..+.+ ...|+|+-+++.. .
T Consensus 137 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~-~--~-l~ell-----~~aDvV~l~lPlt~~ 206 (525)
T TIGR01327 137 YGKTLGVIG-LGRIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELV-D--D-LDELL-----ARADFITVHTPLTPE 206 (525)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEc-C--C-HHHHH-----hhCCEEEEccCCChh
Confidence 678999999 899999999999999999999885433333444553211 0 0 01111 2367777776632 1
Q ss_pred ----c-cccccccCCCcEEEeec
Q 020314 232 ----W-STFEPNLGTTGKVIDFN 249 (327)
Q Consensus 232 ----~-~~~~~~l~~~G~~v~~g 249 (327)
+ ...++.|+++..+|.++
T Consensus 207 T~~li~~~~l~~mk~ga~lIN~a 229 (525)
T TIGR01327 207 TRGLIGAEELAKMKKGVIIVNCA 229 (525)
T ss_pred hccCcCHHHHhcCCCCeEEEEcC
Confidence 1 24456777777777665
No 476
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=91.39 E-value=1.5 Score=37.90 Aligned_cols=53 Identities=19% Similarity=0.269 Sum_probs=43.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec----CCcHHHHHhcCCCEEEeCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG----ARNIELVKSLGADEVLDYK 205 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~----~~~~~~~~~lg~~~v~~~~ 205 (327)
++|. .+|-+.+|.+|.+.+.+|..+|++++.+.. .+|+++++.+|+.-+....
T Consensus 60 ~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 60 KPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 7887 677788999999999999999998888763 2678899999998766544
No 477
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=91.38 E-value=0.13 Score=46.71 Aligned_cols=73 Identities=25% Similarity=0.282 Sum_probs=46.9
Q ss_pred CCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC--cccccC
Q 020314 153 QQKNILITAA----------------SGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD--GAALKS 214 (327)
Q Consensus 153 ~~~~vlV~g~----------------~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~ 214 (327)
+|.+|||+|| +|.+|.+.++.+...|++|+.+.++...+. ..+. ..++..+.. .+....
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~--~~~~-~~~dv~~~~~~~~~v~~ 263 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPT--PAGV-KRIDVESAQEMLDAVLA 263 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccC--CCCc-EEEccCCHHHHHHHHHH
Confidence 7889999999 666999999999999999999886542211 1111 223333222 111111
Q ss_pred CCCCcccEEEeCCCC
Q 020314 215 PSGRKYDAVINCVTG 229 (327)
Q Consensus 215 ~~~~~~d~v~d~~g~ 229 (327)
.. +.+|+++.+.+-
T Consensus 264 ~~-~~~DilI~~Aav 277 (399)
T PRK05579 264 AL-PQADIFIMAAAV 277 (399)
T ss_pred hc-CCCCEEEEcccc
Confidence 11 358999999884
No 478
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.36 E-value=3.4 Score=35.47 Aligned_cols=96 Identities=16% Similarity=0.153 Sum_probs=64.9
Q ss_pred ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT 206 (327)
Q Consensus 128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~ 206 (327)
..||........| +..++. -.|++|+|.|.+..+|.=...++...+++|+..-+. ..++.
T Consensus 136 ~~PcTp~avi~ll-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~-------------- 196 (282)
T PRK14182 136 PRPCTPAGVMRML-DEARVD----PKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAG-------------- 196 (282)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH--------------
Confidence 3565554555455 555553 489999999999999999999999889877754322 22210
Q ss_pred CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|+++-++|.+.+ ---+.++++..++++|...
T Consensus 197 ----~~-----~~ADIvI~AvGk~~~-i~~~~ik~gaiVIDvGin~ 232 (282)
T PRK14182 197 ----EV-----GRADILVAAIGKAEL-VKGAWVKEGAVVIDVGMNR 232 (282)
T ss_pred ----HH-----hhCCEEEEecCCcCc-cCHHHcCCCCEEEEeecee
Confidence 00 347888888886542 2246788888889988553
No 479
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=91.27 E-value=0.37 Score=41.47 Aligned_cols=211 Identities=20% Similarity=0.141 Sum_probs=107.7
Q ss_pred CCCeEEEEEeEEee-ChhhHHHHhcCCCCCCCCCCCeeec-ccceEEEEec-CCCCCCCCCCCEEEEEcc---Cccccee
Q 020314 33 NKDEALLKVEAASI-NPIDWKLQKGMLRPFLPRKFPFIPA-SDVAGEVIGL-GSEVKNFKVGDKVVAVLS---GGGLAEF 106 (327)
Q Consensus 33 ~~~eV~V~v~~~~i-~~~d~~~~~g~~~~~~~~~~p~~~G-~e~~G~V~~v-G~~~~~~~~Gd~V~~~~~---~g~~a~~ 106 (327)
..+||+|+.-+..- ...|.......... .+ .--..++ .|.+=.|.+- -++..-|+.|+..+.+.+ .....+-
T Consensus 29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~I-v~-ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~~ 106 (371)
T COG0686 29 HGHEVLVETGAGAGSGFDDDDYEAAGAKI-VA-TAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTEA 106 (371)
T ss_pred CCcEEEEecCCcCCCCCChHHHHHcCCEE-ec-CHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHHH
Confidence 34589998876543 33444433322110 00 0001333 5555555541 122334999999887661 1111110
Q ss_pred -----EeecCCceeeCCCC-C----ChhhhcccCchHHHHHHHHHHhhCC--c---cCCCCCCCeEEEEcCCChHHHHHH
Q 020314 107 -----AVAKESLTVARPQE-V----SAAEGAGIPCAGLTAHQALTQSLGV--K---LDGSGQQKNILITAASGAVGLYAV 171 (327)
Q Consensus 107 -----~~~~~~~~~~ip~~-~----~~~~aa~~~~~~~ta~~al~~~~~~--~---~~~~~~~~~vlV~g~~g~~G~~~~ 171 (327)
+..-+.-.+..|++ + ++.+.|.-...-..|++..+...+- - .++. +...|.|.| .|.+|.-++
T Consensus 107 l~~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV-~~~kv~iiG-GGvvgtnaA 184 (371)
T COG0686 107 LLKSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGV-LPAKVVVLG-GGVVGTNAA 184 (371)
T ss_pred HHHcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCC-CCccEEEEC-CccccchHH
Confidence 00011122333442 1 2333333333334555533222111 0 1122 333477778 699999999
Q ss_pred HHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEe-CCCCCcccccCCCCCcccEEEeCC---CC--Cc--ccccccccCCC
Q 020314 172 QLAKLGNTHVTATCG-ARNIELVKSLGADEVLD-YKTPDGAALKSPSGRKYDAVINCV---TG--IP--WSTFEPNLGTT 242 (327)
Q Consensus 172 ~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~-~~~~~~~~~~~~~~~~~d~v~d~~---g~--~~--~~~~~~~l~~~ 242 (327)
.+|.-+|++|+..+. .+|+..++.+-...+.. ++... .+.+.. ...|+++.++ |. +. .+..++.|+|+
T Consensus 185 kiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~-~iee~v--~~aDlvIgaVLIpgakaPkLvt~e~vk~MkpG 261 (371)
T COG0686 185 KIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPS-NIEEAV--KKADLVIGAVLIPGAKAPKLVTREMVKQMKPG 261 (371)
T ss_pred HHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHH-HHHHHh--hhccEEEEEEEecCCCCceehhHHHHHhcCCC
Confidence 999999999999984 47887776443333221 22211 111111 3578888765 22 11 56778999999
Q ss_pred cEEEeecC
Q 020314 243 GKVIDFNP 250 (327)
Q Consensus 243 G~~v~~g~ 250 (327)
+.+|++..
T Consensus 262 sVivDVAi 269 (371)
T COG0686 262 SVIVDVAI 269 (371)
T ss_pred cEEEEEEE
Confidence 99998853
No 480
>PLN02427 UDP-apiose/xylose synthase
Probab=91.26 E-value=0.75 Score=41.69 Aligned_cols=35 Identities=17% Similarity=0.047 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~ 187 (327)
+..+|||+||+|-+|..+++.+... |.+|+++++.
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~ 48 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVY 48 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecC
Confidence 4457999999999999888888776 5799988854
No 481
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=91.24 E-value=1.2 Score=34.42 Aligned_cols=96 Identities=13% Similarity=0.128 Sum_probs=53.3
Q ss_pred eEEEEcCCChHHHHHHHHHH-hCCCeEEEEecC---CcHHHHHh----cCCC-EEEeCCCC-------CcccccCC----
Q 020314 156 NILITAASGAVGLYAVQLAK-LGNTHVTATCGA---RNIELVKS----LGAD-EVLDYKTP-------DGAALKSP---- 215 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~~~---~~~~~~~~----lg~~-~v~~~~~~-------~~~~~~~~---- 215 (327)
+|.|+| .|.+|...++.+. ..+.+++++... +-..++-+ .|.- .-+..++. ...+....
T Consensus 2 kv~I~G-~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~ 80 (149)
T smart00846 2 KVGING-FGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN 80 (149)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence 488999 5999998888777 456788887643 22333321 2210 00111110 00111111
Q ss_pred ---CCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314 216 ---SGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 216 ---~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~ 252 (327)
...++|+|+||+|.-. .+.+..++..+.+-|.++.+.
T Consensus 81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~ 121 (149)
T smart00846 81 LPWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPA 121 (149)
T ss_pred CcccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCC
Confidence 2347899999998644 344556787776666666554
No 482
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=91.24 E-value=6.5 Score=33.16 Aligned_cols=91 Identities=14% Similarity=0.085 Sum_probs=54.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCC-CEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 229 (327)
.++.+||-.|+ |. |..+..+++ .|.++++++. ++..+.++.... ...+..+-.. .. .....+|+|+.+..-
T Consensus 41 ~~~~~vLDiGc-G~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~---~~-~~~~~fD~V~s~~~l 113 (251)
T PRK10258 41 RKFTHVLDAGC-GP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIES---LP-LATATFDLAWSNLAV 113 (251)
T ss_pred cCCCeEEEeeC-CC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCccc---Cc-CCCCcEEEEEECchh
Confidence 45678999984 43 555555554 5789999984 455666654332 2222111111 11 123469999875431
Q ss_pred -------CcccccccccCCCcEEEeec
Q 020314 230 -------IPWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 230 -------~~~~~~~~~l~~~G~~v~~g 249 (327)
..+..+.+.|+++|.++...
T Consensus 114 ~~~~d~~~~l~~~~~~Lk~gG~l~~~~ 140 (251)
T PRK10258 114 QWCGNLSTALRELYRVVRPGGVVAFTT 140 (251)
T ss_pred hhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 12667778999999998764
No 483
>PRK07102 short chain dehydrogenase; Provisional
Probab=91.22 E-value=0.43 Score=40.01 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=29.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
++++|+||+|++|...++.+...|++|+++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARD 34 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 469999999999999998888889999998865
No 484
>PLN02476 O-methyltransferase
Probab=91.21 E-value=0.57 Score=40.15 Aligned_cols=94 Identities=13% Similarity=0.107 Sum_probs=57.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHH----HHHhcCCCEEEeCCCCC-ccccc----CCCCCc
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIE----LVKSLGADEVLDYKTPD-GAALK----SPSGRK 219 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~-~~~~~----~~~~~~ 219 (327)
.+.++||=.| +.+|..++.+|+.+ +.+++++..+ +..+ .+++.|...-+.....+ .+.+. ......
T Consensus 117 ~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~~~~~ 194 (278)
T PLN02476 117 LGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNGEGSS 194 (278)
T ss_pred cCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcccCCC
Confidence 6788999998 57788888888876 3578888744 4433 33566654222211111 11111 111246
Q ss_pred ccEEE-eCCCC---CcccccccccCCCcEEEe
Q 020314 220 YDAVI-NCVTG---IPWSTFEPNLGTTGKVID 247 (327)
Q Consensus 220 ~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~ 247 (327)
||+|| |+--. ..++.++++|+++|.++.
T Consensus 195 FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~ 226 (278)
T PLN02476 195 YDFAFVDADKRMYQDYFELLLQLVRVGGVIVM 226 (278)
T ss_pred CCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99987 44432 127788899999999873
No 485
>PRK07791 short chain dehydrogenase; Provisional
Probab=91.17 E-value=0.45 Score=41.18 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=30.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
-+++++||+||++++|.+.++.+...|++|+.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~ 38 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI 38 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeC
Confidence 36789999999999999999888889999888763
No 486
>PRK06924 short chain dehydrogenase; Provisional
Probab=91.17 E-value=0.55 Score=39.51 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=29.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGAR 188 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~ 188 (327)
++++|+||+|++|...++.+...|++|+.+++..
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 3699999999999999988888899999888643
No 487
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=91.12 E-value=0.47 Score=40.10 Aligned_cols=35 Identities=17% Similarity=0.092 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.++++||+||++++|...++.+...|++++.+++.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 57899999999999999999888899999888754
No 488
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=91.09 E-value=0.22 Score=40.40 Aligned_cols=90 Identities=16% Similarity=0.051 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVINC 226 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 226 (327)
.++.+||-.|+ |.|..+..+++ .|.+|++++- +.-.+.+ +..+.. +.....+..... . ...+|+|+.+
T Consensus 29 ~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~d~~~~~-~-~~~fD~I~~~ 101 (195)
T TIGR00477 29 VAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAYDINAAA-L-NEDYDFIFST 101 (195)
T ss_pred CCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEeccchhcc-c-cCCCCEEEEe
Confidence 45668998883 56777888887 4789999984 3333322 222322 111000100011 1 2359999865
Q ss_pred CC-----C----CcccccccccCCCcEEEee
Q 020314 227 VT-----G----IPWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 227 ~g-----~----~~~~~~~~~l~~~G~~v~~ 248 (327)
.. . ..+..+.++|+++|.++.+
T Consensus 102 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 102 VVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred cccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 32 1 1255677799999996544
No 489
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.07 E-value=3.9 Score=35.22 Aligned_cols=95 Identities=17% Similarity=0.181 Sum_probs=63.5
Q ss_pred cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh--CCCeEEEEecC-CcHHHHHhcCCCEEEeCC
Q 020314 129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL--GNTHVTATCGA-RNIELVKSLGADEVLDYK 205 (327)
Q Consensus 129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~--~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~ 205 (327)
.||.....+..| +..++. -.|++++|.|.+..+|.=...++.. .++.|+..-+. ..++.
T Consensus 138 ~PcTp~av~~ll-~~~~i~----l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~------------- 199 (284)
T PRK14193 138 LPCTPRGIVHLL-RRYDVE----LAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAA------------- 199 (284)
T ss_pred CCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHH-------------
Confidence 455555555555 455552 3799999999999999988888876 67777644322 11110
Q ss_pred CCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314 206 TPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP 252 (327)
Q Consensus 206 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 252 (327)
.. +..|+++-++|.+.+ --.+.++++..+|++|...
T Consensus 200 -----~~-----k~ADIvV~AvGkp~~-i~~~~ik~GavVIDvGin~ 235 (284)
T PRK14193 200 -----HT-----RRADIIVAAAGVAHL-VTADMVKPGAAVLDVGVSR 235 (284)
T ss_pred -----HH-----HhCCEEEEecCCcCc-cCHHHcCCCCEEEEccccc
Confidence 00 347899988887653 3356788888999998654
No 490
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=91.02 E-value=0.13 Score=35.70 Aligned_cols=82 Identities=20% Similarity=0.234 Sum_probs=47.0
Q ss_pred ChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-------ccccc
Q 020314 164 GAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-------PWSTF 235 (327)
Q Consensus 164 g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-------~~~~~ 235 (327)
.|.|..+..+++..+.++++++.+ +..+.+++.....-.+....+...+ ....+.+|+|+....-. .+..+
T Consensus 5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l-~~~~~sfD~v~~~~~~~~~~~~~~~l~e~ 83 (95)
T PF08241_consen 5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDL-PFPDNSFDVVFSNSVLHHLEDPEAALREI 83 (95)
T ss_dssp -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSS-SS-TT-EEEEEEESHGGGSSHHHHHHHHH
T ss_pred CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhC-ccccccccccccccceeeccCHHHHHHHH
Confidence 347888888888866799999954 5555555433322111111111111 12345799998644321 25677
Q ss_pred ccccCCCcEEE
Q 020314 236 EPNLGTTGKVI 246 (327)
Q Consensus 236 ~~~l~~~G~~v 246 (327)
.+.|+++|+++
T Consensus 84 ~rvLk~gG~l~ 94 (95)
T PF08241_consen 84 YRVLKPGGRLV 94 (95)
T ss_dssp HHHEEEEEEEE
T ss_pred HHHcCcCeEEe
Confidence 88999999886
No 491
>PRK12937 short chain dehydrogenase; Provisional
Probab=90.96 E-value=0.48 Score=39.66 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=30.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
.++.+++|+|++|++|...++.+...|++++.+.+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~ 37 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYA 37 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence 36788999999999999999999989999887764
No 492
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=90.95 E-value=0.79 Score=35.94 Aligned_cols=89 Identities=20% Similarity=0.166 Sum_probs=54.5
Q ss_pred eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc---
Q 020314 156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP--- 231 (327)
Q Consensus 156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 231 (327)
+|-+.| .|.+|...++-+...|.+|++..+. ++.+.+.+.|+... ++. .+.. ...|+||-|+.+..
T Consensus 3 ~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-~s~---~e~~-----~~~dvvi~~v~~~~~v~ 72 (163)
T PF03446_consen 3 KIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-DSP---AEAA-----EQADVVILCVPDDDAVE 72 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-SSH---HHHH-----HHBSEEEE-SSSHHHHH
T ss_pred EEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-hhh---hhHh-----hcccceEeecccchhhh
Confidence 588899 8999999888888889999988854 56666665563322 111 1111 23589999888632
Q ss_pred --ccc--cccccCCCcEEEeecCCchh
Q 020314 232 --WST--FEPNLGTTGKVIDFNPSPRV 254 (327)
Q Consensus 232 --~~~--~~~~l~~~G~~v~~g~~~~~ 254 (327)
+.. .+..+.++..+|+++..+..
T Consensus 73 ~v~~~~~i~~~l~~g~iiid~sT~~p~ 99 (163)
T PF03446_consen 73 AVLFGENILAGLRPGKIIIDMSTISPE 99 (163)
T ss_dssp HHHHCTTHGGGS-TTEEEEE-SS--HH
T ss_pred hhhhhhHHhhccccceEEEecCCcchh
Confidence 223 56677788888888765443
No 493
>PRK11579 putative oxidoreductase; Provisional
Probab=90.95 E-value=4 Score=36.39 Aligned_cols=132 Identities=11% Similarity=0.068 Sum_probs=71.9
Q ss_pred eEEEEcCCChHHH-HHHHH-HHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-c
Q 020314 156 NILITAASGAVGL-YAVQL-AKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-W 232 (327)
Q Consensus 156 ~vlV~g~~g~~G~-~~~~l-a~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~ 232 (327)
+|.|.| .|.+|. ..+.. .+.-+++++++++.......+.++...+. .+. .+.+ ....+|+|+-|+.... .
T Consensus 6 rvgiiG-~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~~-~ell---~~~~vD~V~I~tp~~~H~ 78 (346)
T PRK11579 6 RVGLIG-YGYASKTFHAPLIAGTPGLELAAVSSSDATKVKADWPTVTVV--SEP-QHLF---NDPNIDLIVIPTPNDTHF 78 (346)
T ss_pred eEEEEC-CCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHHhhCCCCcee--CCH-HHHh---cCCCCCEEEEcCCcHHHH
Confidence 689999 798986 44444 44457899998854322222334322221 111 1222 2346999999998665 7
Q ss_pred cccccccCCCcEEEeecCC-c--hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314 233 STFEPNLGTTGKVIDFNPS-P--RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295 (327)
Q Consensus 233 ~~~~~~l~~~G~~v~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 295 (327)
+.+..++..+-. |++.-+ . ............-+++.+.-.+.......++.+-+++++|.|.
T Consensus 79 ~~~~~al~aGkh-Vl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~iG 143 (346)
T PRK11579 79 PLAKAALEAGKH-VVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVLG 143 (346)
T ss_pred HHHHHHHHCCCe-EEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCCC
Confidence 788888876544 445422 1 1111111112222333333223333445678888889998764
No 494
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=90.91 E-value=0.66 Score=38.92 Aligned_cols=34 Identities=12% Similarity=0.123 Sum_probs=29.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
++++++|+|++|++|...++.+...|++|+.+.+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~ 38 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYN 38 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcC
Confidence 4788999999999999999888888999887653
No 495
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.87 E-value=0.48 Score=39.42 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~ 187 (327)
.+++++|+|+++++|...+..+...|++|+.+.++
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~ 38 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQ 38 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999998888889999888754
No 496
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=90.82 E-value=0.12 Score=42.17 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=58.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHH----HhcCCCEEEeCCCCC-cc----cccCCCCCc
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELV----KSLGADEVLDYKTPD-GA----ALKSPSGRK 219 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~-~~----~~~~~~~~~ 219 (327)
.+.++||-.| +.+|+.++.+|+.+ +++++.+..+ ++.+.+ +..|...-+.....+ .+ .......+.
T Consensus 44 ~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~~~ 121 (205)
T PF01596_consen 44 TRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEEGQ 121 (205)
T ss_dssp HT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTTTS
T ss_pred cCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCCCc
Confidence 5677899998 67899999999876 5799988854 444333 455543212211111 11 111111246
Q ss_pred ccEEE-eCCCCC---cccccccccCCCcEEEee
Q 020314 220 YDAVI-NCVTGI---PWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 220 ~d~v~-d~~g~~---~~~~~~~~l~~~G~~v~~ 248 (327)
||+|| |+.-.. .+..++++|+++|.++.=
T Consensus 122 fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 122 FDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp EEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 99986 665432 266788899999988743
No 497
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=90.80 E-value=0.57 Score=41.83 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=26.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314 155 KNILITAASGAVGLYAVQLAKLGNTHVTATC 185 (327)
Q Consensus 155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~ 185 (327)
.+|||+||+|.+|..+++.+...|.+++++.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~ 32 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVV 32 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEE
Confidence 3699999999999999999998898755443
No 498
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=90.77 E-value=3.1 Score=34.68 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186 (327)
Q Consensus 153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~ 186 (327)
.+.+|+|.| .|.+|..+++++...|++|+++++
T Consensus 30 ~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D 62 (227)
T cd01076 30 AGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSD 62 (227)
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC
Confidence 678999999 899999999999999999997764
No 499
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=90.75 E-value=0.93 Score=37.35 Aligned_cols=95 Identities=12% Similarity=0.037 Sum_probs=54.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHH-HhcCCCEEE------e-CCCCCc-----ccccCC--
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELV-KSLGADEVL------D-YKTPDG-----AALKSP-- 215 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~-~~lg~~~v~------~-~~~~~~-----~~~~~~-- 215 (327)
.++.+||+.|+ |.|.-++.+|. .|.+|++++ ++.-.+.+ ++.+..... . +..... ......
T Consensus 33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 46678999983 56788888876 699999999 44434432 222221100 0 000000 011111
Q ss_pred CCCcccEEEeCCCC---------CcccccccccCCCcEEEeec
Q 020314 216 SGRKYDAVINCVTG---------IPWSTFEPNLGTTGKVIDFN 249 (327)
Q Consensus 216 ~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g 249 (327)
....+|.|+|+..- ..+..+.++|+|+|+++.++
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~ 152 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLIT 152 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 12358999997541 12557778999999876654
No 500
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=90.74 E-value=1.2 Score=37.85 Aligned_cols=89 Identities=10% Similarity=0.038 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC-
Q 020314 152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT- 228 (327)
Q Consensus 152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g- 228 (327)
+++++||=.|+ |.|..+..+++.. +.+|++++.+ .-.+.+++.+.+.+. .+. ... .....||+|+....
T Consensus 28 ~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~-~d~---~~~--~~~~~fD~v~~~~~l 99 (255)
T PRK14103 28 ERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDART-GDV---RDW--KPKPDTDVVVSNAAL 99 (255)
T ss_pred CCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEE-cCh---hhC--CCCCCceEEEEehhh
Confidence 67889999984 3467777888765 6799999854 455566554443221 111 111 12346999987543
Q ss_pred ----C--CcccccccccCCCcEEEee
Q 020314 229 ----G--IPWSTFEPNLGTTGKVIDF 248 (327)
Q Consensus 229 ----~--~~~~~~~~~l~~~G~~v~~ 248 (327)
. ..+..+.+.|+|+|+++..
T Consensus 100 ~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 100 QWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 1 1256777899999999764
Done!