Query 020319
Match_columns 327
No_of_seqs 134 out of 1053
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 15:06:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w5q_A Delta-aminolevulinic ac 100.0 4E-112 2E-116 809.9 21.6 234 92-327 2-238 (337)
2 3obk_A Delta-aminolevulinic ac 100.0 2E-110 6E-115 802.5 21.4 235 89-327 9-245 (356)
3 1w1z_A Delta-aminolevulinic ac 100.0 3E-110 1E-114 795.0 20.5 227 97-327 4-231 (328)
4 1l6s_A Porphobilinogen synthas 100.0 6E-108 2E-112 777.8 22.1 222 101-327 2-224 (323)
5 1h7n_A 5-aminolaevulinic acid 100.0 7E-106 2E-110 769.1 22.7 228 99-327 11-241 (342)
6 1pv8_A Delta-aminolevulinic ac 100.0 3E-105 1E-109 761.4 17.3 225 101-327 2-230 (330)
7 1qop_A Tryptophan synthase alp 89.5 1.6 5.3E-05 39.5 9.0 46 158-213 32-95 (268)
8 1yxy_A Putative N-acetylmannos 89.2 5.5 0.00019 34.3 12.0 51 159-219 90-140 (234)
9 3hgj_A Chromate reductase; TIM 86.3 5.1 0.00017 37.6 10.7 95 158-266 153-259 (349)
10 3ih1_A Methylisocitrate lyase; 86.1 7.5 0.00026 36.7 11.7 102 158-280 105-210 (305)
11 1zlp_A PSR132, petal death pro 85.9 4.5 0.00015 38.5 10.1 100 158-280 117-224 (318)
12 3lye_A Oxaloacetate acetyl hyd 85.5 6.8 0.00023 37.1 11.1 103 158-281 104-214 (307)
13 1xg4_A Probable methylisocitra 84.9 8.5 0.00029 36.0 11.4 103 158-281 95-203 (295)
14 4af0_A Inosine-5'-monophosphat 84.8 4.7 0.00016 41.5 10.2 99 155-292 278-389 (556)
15 2ze3_A DFA0005; organic waste 83.3 11 0.00037 34.9 11.3 107 158-281 93-204 (275)
16 2ekc_A AQ_1548, tryptophan syn 81.8 5.2 0.00018 36.0 8.4 48 158-215 32-97 (262)
17 1o66_A 3-methyl-2-oxobutanoate 81.0 5.1 0.00017 37.7 8.2 108 150-281 89-196 (275)
18 1q6o_A Humps, 3-keto-L-gulonat 81.0 4.3 0.00015 35.0 7.3 62 201-285 45-107 (216)
19 3lab_A Putative KDPG (2-keto-3 80.8 8.3 0.00028 34.9 9.3 67 158-266 26-93 (217)
20 4e38_A Keto-hydroxyglutarate-a 80.7 8.3 0.00028 35.0 9.3 46 158-219 47-92 (232)
21 3eoo_A Methylisocitrate lyase; 80.1 22 0.00075 33.4 12.3 102 158-280 99-206 (298)
22 1vhc_A Putative KHG/KDPG aldol 80.0 6.3 0.00022 35.1 8.2 52 154-222 27-78 (224)
23 3s1x_A Probable transaldolase; 79.5 1.6 5.5E-05 39.8 4.2 45 249-294 115-167 (223)
24 2hjp_A Phosphonopyruvate hydro 79.0 20 0.00067 33.5 11.5 104 158-281 91-203 (290)
25 2nx9_A Oxaloacetate decarboxyl 77.9 7.7 0.00026 38.5 8.8 91 159-280 102-200 (464)
26 1h5y_A HISF; histidine biosynt 76.7 11 0.00037 31.9 8.3 92 159-286 156-250 (253)
27 1oy0_A Ketopantoate hydroxymet 76.0 12 0.00039 35.3 9.0 77 198-280 137-213 (281)
28 3b8i_A PA4872 oxaloacetate dec 76.0 6.7 0.00023 36.7 7.4 100 158-280 98-203 (287)
29 3exr_A RMPD (hexulose-6-phosph 75.7 5.5 0.00019 35.2 6.4 61 201-284 47-108 (221)
30 1h7n_A 5-aminolaevulinic acid 75.3 3.5 0.00012 40.1 5.4 125 113-263 187-326 (342)
31 4fo4_A Inosine 5'-monophosphat 75.3 20 0.00067 34.5 10.6 46 159-217 109-154 (366)
32 2qiw_A PEP phosphonomutase; st 75.1 4 0.00014 37.4 5.6 103 160-280 96-203 (255)
33 3ajx_A 3-hexulose-6-phosphate 74.4 8.8 0.0003 32.2 7.1 91 158-286 14-105 (207)
34 3r8r_A Transaldolase; pentose 74.4 1.9 6.5E-05 39.0 3.1 45 249-294 113-165 (212)
35 1pv8_A Delta-aminolevulinic ac 74.1 3.6 0.00012 39.9 5.1 80 158-263 233-315 (330)
36 1z41_A YQJM, probable NADH-dep 74.0 11 0.00036 35.1 8.2 93 159-266 146-249 (338)
37 2r91_A 2-keto-3-deoxy-(6-phosp 73.9 17 0.00059 33.0 9.5 104 158-295 20-130 (286)
38 3l5l_A Xenobiotic reductase A; 73.0 8.2 0.00028 36.4 7.3 97 158-267 159-267 (363)
39 1y0e_A Putative N-acetylmannos 72.5 43 0.0015 28.3 12.2 49 160-219 78-126 (223)
40 3vav_A 3-methyl-2-oxobutanoate 72.2 11 0.00038 35.3 7.9 101 158-280 107-207 (275)
41 3r2g_A Inosine 5'-monophosphat 72.2 11 0.00038 36.3 8.1 47 158-217 100-146 (361)
42 3zwt_A Dihydroorotate dehydrog 71.9 19 0.00063 34.5 9.5 121 131-289 221-358 (367)
43 4fxs_A Inosine-5'-monophosphat 71.5 23 0.00078 35.0 10.3 47 158-217 231-277 (496)
44 3fa4_A 2,3-dimethylmalate lyas 70.9 26 0.0009 33.1 10.1 102 158-280 96-205 (302)
45 3iix_A Biotin synthetase, puta 70.5 20 0.00068 32.3 9.0 55 149-216 80-134 (348)
46 3ist_A Glutamate racemase; str 69.4 12 0.0004 34.3 7.2 90 202-303 20-129 (269)
47 3usb_A Inosine-5'-monophosphat 69.2 16 0.00055 36.2 8.7 67 158-264 256-323 (511)
48 1wa3_A 2-keto-3-deoxy-6-phosph 68.2 14 0.00049 30.9 7.1 51 154-221 20-71 (205)
49 3gr7_A NADPH dehydrogenase; fl 67.5 11 0.00038 35.4 6.8 94 159-267 146-250 (340)
50 3i7m_A XAA-Pro dipeptidase; st 67.3 3.7 0.00013 32.6 3.1 36 267-303 1-37 (140)
51 1nvm_A HOA, 4-hydroxy-2-oxoval 67.1 21 0.00071 33.4 8.6 88 160-280 96-191 (345)
52 1xky_A Dihydrodipicolinate syn 66.7 22 0.00075 32.7 8.6 106 158-295 34-146 (301)
53 3nav_A Tryptophan synthase alp 66.3 25 0.00084 32.4 8.8 51 158-218 35-105 (271)
54 2i1o_A Nicotinate phosphoribos 65.8 12 0.00042 36.3 6.9 67 200-291 197-274 (398)
55 2yxg_A DHDPS, dihydrodipicolin 65.3 33 0.0011 31.2 9.4 111 153-296 18-135 (289)
56 3t7v_A Methylornithine synthas 65.1 56 0.0019 29.7 10.9 35 252-286 286-337 (350)
57 3b0p_A TRNA-dihydrouridine syn 64.6 27 0.00093 32.7 8.9 58 158-217 145-202 (350)
58 2ehh_A DHDPS, dihydrodipicolin 64.1 29 0.00099 31.7 8.7 110 153-295 18-134 (294)
59 4avf_A Inosine-5'-monophosphat 63.5 25 0.00085 34.6 8.7 68 158-264 229-296 (490)
60 2e6f_A Dihydroorotate dehydrog 63.4 20 0.00067 32.4 7.4 119 131-288 161-303 (314)
61 3bg3_A Pyruvate carboxylase, m 63.1 14 0.00046 38.8 7.1 97 159-280 199-303 (718)
62 3m5v_A DHDPS, dihydrodipicolin 63.1 29 0.00098 31.9 8.6 111 152-295 24-142 (301)
63 2nuw_A 2-keto-3-deoxygluconate 62.7 23 0.00079 32.3 7.8 103 158-294 21-130 (288)
64 1o5k_A DHDPS, dihydrodipicolin 62.1 24 0.00082 32.5 7.9 111 153-296 30-147 (306)
65 1rqb_A Transcarboxylase 5S sub 62.1 19 0.00064 36.6 7.7 91 159-280 119-217 (539)
66 2wkj_A N-acetylneuraminate lya 61.2 33 0.0011 31.6 8.6 107 158-295 33-146 (303)
67 1w3i_A EDA, 2-keto-3-deoxy glu 61.2 25 0.00086 32.1 7.8 104 158-295 21-131 (293)
68 1f76_A Dihydroorotate dehydrog 61.0 34 0.0012 31.3 8.6 95 131-264 212-316 (336)
69 1m3u_A 3-methyl-2-oxobutanoate 60.9 16 0.00055 34.0 6.5 107 150-280 89-195 (264)
70 1eep_A Inosine 5'-monophosphat 60.6 63 0.0021 30.5 10.7 47 158-217 153-199 (404)
71 3cpr_A Dihydrodipicolinate syn 60.5 43 0.0015 30.8 9.3 106 158-295 38-150 (304)
72 3vgf_A Malto-oligosyltrehalose 60.4 63 0.0022 31.9 11.0 120 158-283 120-276 (558)
73 2r8w_A AGR_C_1641P; APC7498, d 60.3 29 0.001 32.5 8.2 106 158-295 56-168 (332)
74 2r14_A Morphinone reductase; H 59.8 25 0.00086 33.5 7.8 98 158-267 167-276 (377)
75 1ydn_A Hydroxymethylglutaryl-C 59.8 5.9 0.0002 35.9 3.3 101 151-285 150-262 (295)
76 1me8_A Inosine-5'-monophosphat 59.7 36 0.0012 33.4 9.1 46 158-216 242-288 (503)
77 2rfg_A Dihydrodipicolinate syn 59.6 29 0.001 31.8 8.0 110 153-295 18-134 (297)
78 2v9d_A YAGE; dihydrodipicolini 59.2 31 0.0011 32.5 8.2 106 158-295 53-165 (343)
79 3gka_A N-ethylmaleimide reduct 59.2 41 0.0014 32.1 9.1 112 158-280 162-286 (361)
80 1s2w_A Phosphoenolpyruvate pho 58.8 74 0.0025 29.6 10.6 104 158-281 95-207 (295)
81 1ydo_A HMG-COA lyase; TIM-barr 57.3 15 0.00053 34.0 5.7 91 160-270 84-181 (307)
82 1rd5_A Tryptophan synthase alp 57.0 43 0.0015 29.5 8.3 19 158-176 33-51 (262)
83 4ab4_A Xenobiotic reductase B; 56.8 43 0.0015 31.9 8.8 111 159-280 155-278 (362)
84 3i65_A Dihydroorotate dehydrog 56.6 23 0.00079 34.8 7.1 106 158-289 284-405 (415)
85 3qze_A DHDPS, dihydrodipicolin 56.5 42 0.0014 31.1 8.6 106 158-295 45-157 (314)
86 1ub3_A Aldolase protein; schif 56.3 28 0.00096 31.1 7.1 93 158-279 72-172 (220)
87 3oa3_A Aldolase; structural ge 56.3 74 0.0025 30.0 10.2 154 106-291 67-238 (288)
88 1f6k_A N-acetylneuraminate lya 56.0 45 0.0016 30.3 8.6 106 158-295 25-138 (293)
89 3flu_A DHDPS, dihydrodipicolin 55.9 49 0.0017 30.2 8.8 105 158-294 29-140 (297)
90 3no5_A Uncharacterized protein 55.8 12 0.0004 34.9 4.6 57 153-217 27-83 (275)
91 1jub_A Dihydroorotate dehydrog 55.6 20 0.00067 32.4 6.0 120 131-288 159-301 (311)
92 3uhf_A Glutamate racemase; str 55.5 13 0.00044 34.3 4.8 90 202-303 39-150 (274)
93 3c2e_A Nicotinate-nucleotide p 55.5 15 0.00051 34.2 5.3 67 199-292 185-254 (294)
94 1vhc_A Putative KHG/KDPG aldol 54.9 14 0.00048 32.8 4.8 52 144-217 111-162 (224)
95 1icp_A OPR1, 12-oxophytodienoa 54.8 25 0.00086 33.5 6.8 97 158-266 168-276 (376)
96 2gou_A Oxidoreductase, FMN-bin 54.7 35 0.0012 32.3 7.8 98 158-267 162-271 (365)
97 2qf7_A Pyruvate carboxylase pr 54.3 28 0.00094 38.2 7.9 120 159-303 647-777 (1165)
98 2v82_A 2-dehydro-3-deoxy-6-pho 54.1 27 0.00094 29.4 6.3 81 160-282 111-202 (212)
99 2ftp_A Hydroxymethylglutaryl-C 53.9 12 0.0004 34.4 4.2 90 160-269 86-182 (302)
100 4e38_A Keto-hydroxyglutarate-a 53.4 11 0.00038 34.2 3.9 54 142-217 126-179 (232)
101 2vc6_A MOSA, dihydrodipicolina 52.9 35 0.0012 31.1 7.2 110 153-295 18-134 (292)
102 1wx0_A Transaldolase; structur 52.8 16 0.00056 32.9 4.9 46 250-296 122-175 (223)
103 2cw6_A Hydroxymethylglutaryl-C 52.7 10 0.00035 34.6 3.6 77 152-263 152-229 (298)
104 3jr2_A Hexulose-6-phosphate sy 52.2 23 0.00079 30.5 5.7 91 201-299 48-148 (218)
105 3bg3_A Pyruvate carboxylase, m 52.1 19 0.00063 37.8 5.9 116 158-306 262-389 (718)
106 1tv5_A Dhodehase, dihydroorota 52.1 87 0.003 30.8 10.4 105 158-288 312-432 (443)
107 3edf_A FSPCMD, cyclomaltodextr 52.0 76 0.0026 31.5 10.1 156 123-283 102-331 (601)
108 3l21_A DHDPS, dihydrodipicolin 51.8 51 0.0017 30.3 8.2 105 158-294 37-148 (304)
109 3uw2_A Phosphoglucomutase/phos 51.5 1.3E+02 0.0044 29.6 11.5 91 166-267 214-307 (485)
110 1wbh_A KHG/KDPG aldolase; lyas 51.3 27 0.00091 30.7 6.0 49 158-222 29-77 (214)
111 3ngj_A Deoxyribose-phosphate a 51.0 30 0.001 31.7 6.5 96 158-280 96-197 (239)
112 1jcn_A Inosine monophosphate d 50.9 43 0.0015 32.7 7.9 47 158-217 255-301 (514)
113 3m07_A Putative alpha amylase; 50.8 24 0.00083 35.7 6.3 124 154-283 152-309 (618)
114 4gqr_A Pancreatic alpha-amylas 50.5 16 0.00055 33.8 4.6 68 153-223 19-101 (496)
115 3a5f_A Dihydrodipicolinate syn 50.5 23 0.00078 32.3 5.6 106 158-295 23-135 (291)
116 1mxs_A KDPG aldolase; 2-keto-3 50.4 33 0.0011 30.4 6.5 49 158-222 39-87 (225)
117 1s4d_A Uroporphyrin-III C-meth 50.3 36 0.0012 30.7 6.8 87 191-285 23-121 (280)
118 3na8_A Putative dihydrodipicol 50.2 45 0.0016 30.9 7.7 104 158-295 46-158 (315)
119 2yyu_A Orotidine 5'-phosphate 49.9 16 0.00055 32.4 4.4 45 201-267 46-90 (246)
120 1qwg_A PSL synthase;, (2R)-pho 49.8 21 0.00071 33.3 5.2 85 158-272 86-170 (251)
121 3q58_A N-acetylmannosamine-6-p 49.7 61 0.0021 28.7 8.1 46 160-219 91-136 (229)
122 1dbt_A Orotidine 5'-phosphate 49.5 16 0.00054 32.2 4.3 44 201-266 45-88 (239)
123 1ydn_A Hydroxymethylglutaryl-C 49.2 31 0.0011 31.2 6.2 90 160-269 82-178 (295)
124 3tak_A DHDPS, dihydrodipicolin 49.2 63 0.0022 29.3 8.3 105 158-294 23-134 (291)
125 2cw6_A Hydroxymethylglutaryl-C 49.0 25 0.00086 32.0 5.6 101 160-280 83-198 (298)
126 3chv_A Prokaryotic domain of u 48.9 17 0.0006 33.9 4.6 58 153-218 31-88 (284)
127 3vnd_A TSA, tryptophan synthas 48.9 59 0.002 29.8 8.1 19 158-176 33-51 (267)
128 2ojp_A DHDPS, dihydrodipicolin 48.6 35 0.0012 31.1 6.5 106 158-295 23-135 (292)
129 2b7n_A Probable nicotinate-nuc 47.7 29 0.00099 31.7 5.8 71 153-266 187-257 (273)
130 1u83_A Phosphosulfolactate syn 47.7 14 0.00046 35.0 3.7 79 158-263 111-189 (276)
131 1w5q_A Delta-aminolevulinic ac 47.3 16 0.00056 35.4 4.2 137 93-263 168-321 (337)
132 3d0c_A Dihydrodipicolinate syn 47.0 42 0.0014 31.1 6.8 104 158-294 34-144 (314)
133 3m47_A Orotidine 5'-phosphate 46.9 31 0.0011 30.5 5.8 64 201-285 54-118 (228)
134 3hbl_A Pyruvate carboxylase; T 46.3 33 0.0011 37.6 6.9 120 159-303 629-760 (1150)
135 2ze0_A Alpha-glucosidase; TIM 46.2 33 0.0011 33.6 6.3 60 158-223 32-103 (555)
136 3kru_A NADH:flavin oxidoreduct 45.9 46 0.0016 31.4 7.1 93 159-266 145-249 (343)
137 3ndo_A Deoxyribose-phosphate a 45.7 27 0.00094 31.7 5.3 100 158-280 81-187 (231)
138 4g9p_A 4-hydroxy-3-methylbut-2 45.7 15 0.0005 36.5 3.7 50 238-292 34-86 (406)
139 1vyr_A Pentaerythritol tetrani 45.5 88 0.003 29.5 9.0 100 158-267 162-272 (364)
140 3igs_A N-acetylmannosamine-6-p 45.3 83 0.0028 27.8 8.3 46 160-219 91-136 (232)
141 3dmp_A Uracil phosphoribosyltr 44.2 32 0.0011 30.8 5.4 48 158-223 144-193 (217)
142 2y7e_A 3-keto-5-aminohexanoate 44.2 17 0.00058 34.0 3.8 57 153-217 31-87 (282)
143 1bd3_D Uprtase, uracil phospho 44.0 33 0.0011 31.3 5.6 48 158-223 171-220 (243)
144 3k1d_A 1,4-alpha-glucan-branch 43.9 44 0.0015 34.9 7.1 104 154-263 261-399 (722)
145 2jfz_A Glutamate racemase; cel 43.9 33 0.0011 30.4 5.5 92 202-305 15-128 (255)
146 2xwp_A Sirohydrochlorin cobalt 43.5 1.3E+02 0.0045 26.6 9.4 125 158-294 61-201 (264)
147 2i14_A Nicotinate-nucleotide p 43.5 65 0.0022 31.2 7.8 69 198-291 192-272 (395)
148 1ua7_A Alpha-amylase; beta-alp 43.5 21 0.00073 33.6 4.3 108 154-263 15-170 (422)
149 1mxs_A KDPG aldolase; 2-keto-3 43.5 53 0.0018 29.1 6.7 89 144-280 120-215 (225)
150 1lt8_A Betaine-homocysteine me 43.3 40 0.0014 32.9 6.3 116 158-284 54-178 (406)
151 1vpx_A Protein (transaldolase 43.3 17 0.00058 33.1 3.5 43 251-294 126-176 (230)
152 1w1z_A Delta-aminolevulinic ac 43.1 21 0.0007 34.6 4.2 138 93-263 163-315 (328)
153 3daq_A DHDPS, dihydrodipicolin 42.7 1.3E+02 0.0044 27.4 9.3 110 152-294 19-135 (292)
154 1gte_A Dihydropyrimidine dehyd 42.6 52 0.0018 35.0 7.5 103 159-288 717-846 (1025)
155 3b4u_A Dihydrodipicolinate syn 42.4 86 0.0029 28.5 8.1 109 158-295 25-141 (294)
156 1yad_A Regulatory protein TENI 42.4 92 0.0031 26.4 7.9 93 160-286 120-218 (221)
157 1l6s_A Porphobilinogen synthas 42.3 22 0.00074 34.4 4.2 138 93-263 157-308 (323)
158 1m7x_A 1,4-alpha-glucan branch 42.1 56 0.0019 32.7 7.4 104 154-263 153-291 (617)
159 3cwn_A Transaldolase B; direct 41.9 29 0.001 33.1 5.1 40 249-292 181-244 (337)
160 3r12_A Deoxyribose-phosphate a 41.9 61 0.0021 30.1 7.0 80 158-266 112-193 (260)
161 4h17_A Hydrolase, isochorismat 41.7 57 0.002 27.9 6.5 77 166-266 118-194 (197)
162 3aty_A Tcoye, prostaglandin F2 41.4 48 0.0016 31.7 6.5 99 158-267 175-287 (379)
163 3hjz_A Transaldolase B; parach 41.2 11 0.00037 36.3 2.0 44 249-293 165-229 (334)
164 3si9_A DHDPS, dihydrodipicolin 41.1 85 0.0029 29.1 8.0 106 158-295 44-156 (315)
165 3rr1_A GALD, putative D-galact 40.9 1.5E+02 0.0051 28.3 9.9 127 158-293 128-286 (405)
166 1l6w_A Fructose-6-phosphate al 40.8 19 0.00065 32.4 3.4 45 249-294 114-166 (220)
167 2z1k_A (NEO)pullulanase; hydro 40.7 1.1E+02 0.0038 28.8 8.9 120 155-283 49-223 (475)
168 1n7k_A Deoxyribose-phosphate a 40.4 32 0.0011 31.2 4.8 77 158-267 89-169 (234)
169 2hsa_B 12-oxophytodienoate red 40.2 51 0.0017 31.7 6.5 98 158-266 172-286 (402)
170 3qfe_A Putative dihydrodipicol 39.7 1.3E+02 0.0044 27.9 9.0 110 153-295 29-147 (318)
171 1ujp_A Tryptophan synthase alp 39.7 22 0.00075 32.5 3.7 40 254-294 114-154 (271)
172 1xrs_A D-lysine 5,6-aminomutas 39.5 18 0.00062 36.8 3.3 62 236-305 159-244 (516)
173 4aie_A Glucan 1,6-alpha-glucos 39.4 45 0.0015 31.6 5.9 60 158-223 33-104 (549)
174 1vrd_A Inosine-5'-monophosphat 39.4 1.1E+02 0.0036 29.6 8.7 47 158-217 237-283 (494)
175 1ep3_A Dihydroorotate dehydrog 39.1 95 0.0033 27.4 7.7 20 159-178 178-197 (311)
176 2jbm_A Nicotinate-nucleotide p 39.0 36 0.0012 31.7 5.1 71 153-266 202-272 (299)
177 3obk_A Delta-aminolevulinic ac 38.8 28 0.00095 34.1 4.4 79 158-263 248-329 (356)
178 3dhu_A Alpha-amylase; structur 38.7 60 0.0021 30.5 6.7 123 158-283 31-192 (449)
179 3hg3_A Alpha-galactosidase A; 38.6 1.4E+02 0.0049 29.1 9.4 109 159-285 38-165 (404)
180 2gzm_A Glutamate racemase; enz 38.5 57 0.0019 29.1 6.2 89 202-302 18-126 (267)
181 3i4e_A Isocitrate lyase; struc 38.3 2.1E+02 0.007 28.6 10.6 121 159-282 169-308 (439)
182 3vcn_A Mannonate dehydratase; 38.1 1.9E+02 0.0065 27.7 10.2 137 154-294 150-336 (425)
183 3aj7_A Oligo-1,6-glucosidase; 38.1 53 0.0018 32.7 6.4 60 158-223 41-112 (589)
184 3dz1_A Dihydrodipicolinate syn 38.0 1.1E+02 0.0036 28.2 8.1 108 158-295 30-142 (313)
185 1m53_A Isomaltulose synthase; 37.5 55 0.0019 32.2 6.4 60 158-223 46-117 (570)
186 3ndc_A Precorrin-4 C(11)-methy 37.5 47 0.0016 29.8 5.4 85 193-285 14-105 (264)
187 3h5d_A DHDPS, dihydrodipicolin 37.2 2E+02 0.0068 26.5 9.8 106 158-295 29-142 (311)
188 1lwj_A 4-alpha-glucanotransfer 36.8 67 0.0023 30.2 6.6 59 158-223 24-94 (441)
189 1ps9_A 2,4-dienoyl-COA reducta 36.8 66 0.0023 32.1 6.9 92 159-264 143-246 (671)
190 3t7v_A Methylornithine synthas 36.7 38 0.0013 30.8 4.8 141 148-302 86-248 (350)
191 1vli_A Spore coat polysacchari 36.7 49 0.0017 32.3 5.8 71 154-263 169-245 (385)
192 2zic_A Dextran glucosidase; TI 36.6 50 0.0017 32.3 5.9 101 158-263 32-191 (543)
193 3fkr_A L-2-keto-3-deoxyarabona 36.6 1.5E+02 0.0052 27.2 8.9 106 158-295 30-145 (309)
194 1ccw_A Protein (glutamate muta 36.5 26 0.00088 28.4 3.3 47 242-291 40-89 (137)
195 3b0p_A TRNA-dihydrouridine syn 36.2 73 0.0025 29.8 6.7 93 158-267 71-165 (350)
196 2hmc_A AGR_L_411P, dihydrodipi 35.9 1.2E+02 0.004 28.6 8.2 106 158-296 48-160 (344)
197 2f7f_A Nicotinate phosphoribos 35.8 34 0.0012 34.2 4.6 14 199-212 214-227 (494)
198 3c6c_A 3-keto-5-aminohexanoate 35.4 48 0.0017 31.5 5.4 78 132-217 23-102 (316)
199 2ekc_A AQ_1548, tryptophan syn 35.2 54 0.0018 29.3 5.5 34 237-274 26-64 (262)
200 1q7z_A 5-methyltetrahydrofolat 35.2 1.1E+02 0.0038 30.9 8.3 152 133-295 15-176 (566)
201 1bf2_A Isoamylase; hydrolase, 34.9 96 0.0033 32.0 7.9 107 154-263 203-372 (750)
202 3m16_A Transaldolase; dimer, m 34.7 41 0.0014 32.2 4.8 45 249-294 169-234 (329)
203 1zja_A Trehalulose synthase; s 34.6 66 0.0023 31.5 6.4 60 158-223 33-104 (557)
204 1zfj_A Inosine monophosphate d 34.4 1.9E+02 0.0066 27.6 9.6 46 158-216 233-278 (491)
205 1thf_D HISF protein; thermophI 33.9 1.3E+02 0.0045 25.7 7.6 91 159-285 153-246 (253)
206 3kwr_A Putative RNA-binding pr 33.4 40 0.0014 26.8 3.9 49 128-178 8-60 (97)
207 3ffs_A Inosine-5-monophosphate 33.3 2.2E+02 0.0074 27.6 9.7 44 160-217 146-189 (400)
208 1qpo_A Quinolinate acid phosph 33.0 77 0.0026 29.4 6.3 64 160-264 204-267 (284)
209 2b7n_A Probable nicotinate-nuc 33.0 73 0.0025 29.1 6.0 67 198-292 167-234 (273)
210 1yxy_A Putative N-acetylmannos 32.5 54 0.0019 28.0 4.9 69 160-264 143-213 (234)
211 1o5o_A Uracil phosphoribosyltr 32.5 80 0.0027 28.3 6.1 44 158-218 151-194 (221)
212 2oho_A Glutamate racemase; iso 32.3 82 0.0028 28.2 6.2 90 201-302 26-135 (273)
213 1y0e_A Putative N-acetylmannos 32.2 1.8E+02 0.0063 24.3 8.1 73 160-264 129-202 (223)
214 2wnw_A Activated by transcript 32.1 2E+02 0.007 27.7 9.4 92 200-294 124-239 (447)
215 1zco_A 2-dehydro-3-deoxyphosph 32.1 1.2E+02 0.0039 27.6 7.2 81 158-264 145-227 (262)
216 3inp_A D-ribulose-phosphate 3- 31.8 2.9E+02 0.0099 24.9 9.8 49 158-219 41-93 (246)
217 3out_A Glutamate racemase; str 31.7 93 0.0032 28.2 6.5 90 202-303 22-129 (268)
218 3l5a_A NADH/flavin oxidoreduct 31.2 1.1E+02 0.0037 29.7 7.2 98 159-268 172-287 (419)
219 2czd_A Orotidine 5'-phosphate 31.0 54 0.0018 27.9 4.6 56 202-278 42-98 (208)
220 1zuw_A Glutamate racemase 1; ( 31.0 85 0.0029 28.2 6.1 89 202-303 18-128 (272)
221 1rpx_A Protein (ribulose-phosp 30.9 1.3E+02 0.0044 25.6 7.0 44 158-210 24-67 (230)
222 1uok_A Oligo-1,6-glucosidase; 30.8 71 0.0024 31.3 5.9 60 158-223 32-103 (558)
223 3ijd_A Uncharacterized protein 30.4 1.5E+02 0.0052 28.0 7.9 105 158-290 105-214 (315)
224 1ea9_C Cyclomaltodextrinase; h 30.3 86 0.0029 31.0 6.5 124 154-283 170-345 (583)
225 2ftp_A Hydroxymethylglutaryl-C 30.3 15 0.00052 33.6 1.0 80 152-265 155-234 (302)
226 3tkf_A Transaldolase; structur 30.1 50 0.0017 31.8 4.6 44 249-293 188-253 (345)
227 1b73_A Glutamate racemase; iso 30.1 90 0.0031 27.5 6.0 94 202-307 15-128 (254)
228 2jbm_A Nicotinate-nucleotide p 29.6 99 0.0034 28.7 6.4 35 257-292 215-249 (299)
229 2jfq_A Glutamate racemase; cel 29.6 79 0.0027 28.7 5.6 89 202-302 37-145 (286)
230 1t57_A Conserved protein MTH16 29.2 68 0.0023 29.2 5.0 100 159-296 40-140 (206)
231 2eq5_A 228AA long hypothetical 29.0 2.2E+02 0.0076 24.0 8.1 61 202-270 26-86 (228)
232 3s5o_A 4-hydroxy-2-oxoglutarat 29.0 1.3E+02 0.0046 27.5 7.1 106 158-295 36-150 (307)
233 1eix_A Orotidine 5'-monophosph 29.0 65 0.0022 28.5 4.9 45 201-267 56-100 (245)
234 1w8s_A FBP aldolase, fructose- 28.7 1E+02 0.0035 27.7 6.2 100 158-283 93-194 (263)
235 2ztj_A Homocitrate synthase; ( 28.7 71 0.0024 30.4 5.4 98 160-280 77-186 (382)
236 2bhu_A Maltooligosyltrehalose 28.6 1.1E+02 0.0036 30.7 6.9 121 158-283 145-299 (602)
237 3ble_A Citramalate synthase fr 28.5 38 0.0013 31.7 3.4 98 162-280 101-211 (337)
238 3hh1_A Tetrapyrrole methylase 28.2 54 0.0018 25.7 3.8 85 193-285 16-109 (117)
239 2vef_A Dihydropteroate synthas 27.9 45 0.0015 31.4 3.8 20 244-263 31-50 (314)
240 1rqb_A Transcarboxylase 5S sub 27.9 50 0.0017 33.5 4.4 124 151-308 170-306 (539)
241 3zss_A Putative glucanohydrola 27.8 2.6E+02 0.009 28.9 9.8 122 158-283 254-434 (695)
242 4ef8_A Dihydroorotate dehydrog 27.8 61 0.0021 30.9 4.7 120 131-289 194-337 (354)
243 2vvt_A Glutamate racemase; iso 27.8 1E+02 0.0036 27.9 6.1 91 201-303 38-148 (290)
244 1v9s_A Uracil phosphoribosyltr 27.7 87 0.003 27.7 5.4 48 158-223 138-185 (208)
245 2yxb_A Coenzyme B12-dependent 27.3 44 0.0015 27.9 3.3 47 243-292 56-105 (161)
246 3eeg_A 2-isopropylmalate synth 27.2 69 0.0024 29.9 4.9 91 168-281 92-194 (325)
247 1vcv_A Probable deoxyribose-ph 27.0 3.4E+02 0.012 24.3 9.5 103 158-291 68-188 (226)
248 1mzh_A Deoxyribose-phosphate a 26.9 1.9E+02 0.0066 25.1 7.5 83 158-283 133-216 (225)
249 2nv1_A Pyridoxal biosynthesis 26.9 32 0.0011 31.3 2.5 48 159-210 30-77 (305)
250 4e16_A Precorrin-4 C(11)-methy 26.8 86 0.0029 27.7 5.3 87 193-285 15-106 (253)
251 3gr7_A NADPH dehydrogenase; fl 26.6 3.5E+02 0.012 25.1 9.7 77 154-264 227-305 (340)
252 3a5y_A GENX, putative lysyl-tR 26.4 26 0.00089 33.3 1.9 22 273-294 43-66 (345)
253 1vhn_A Putative flavin oxidore 26.4 1.1E+02 0.0038 27.8 6.1 85 158-264 72-158 (318)
254 3lg3_A Isocitrate lyase; conse 26.3 1.9E+02 0.0064 28.9 8.0 139 125-282 147-308 (435)
255 3cyv_A URO-D, UPD, uroporphyri 26.2 46 0.0016 30.6 3.5 95 197-294 122-249 (354)
256 3khj_A Inosine-5-monophosphate 26.2 2E+02 0.0068 27.2 8.0 44 160-217 107-150 (361)
257 2c6q_A GMP reductase 2; TIM ba 25.9 3.1E+02 0.011 25.7 9.2 44 160-216 120-165 (351)
258 3eol_A Isocitrate lyase; seatt 25.8 1.9E+02 0.0064 28.8 7.9 121 159-282 162-303 (433)
259 1mzh_A Deoxyribose-phosphate a 25.8 2.9E+02 0.01 23.9 8.5 82 159-267 72-153 (225)
260 4aio_A Limit dextrinase; hydro 25.7 1.6E+02 0.0053 29.9 7.5 22 158-179 287-308 (884)
261 1wbh_A KHG/KDPG aldolase; lyas 25.5 81 0.0028 27.6 4.8 52 144-217 110-161 (214)
262 3klk_A Glucansucrase; native f 25.5 91 0.0031 34.3 6.1 70 152-225 682-772 (1039)
263 3faw_A Reticulocyte binding pr 25.4 4.3E+02 0.015 28.1 11.1 122 158-282 297-476 (877)
264 1wzl_A Alpha-amylase II; pullu 25.4 93 0.0032 30.7 5.7 122 154-283 171-345 (585)
265 1rd5_A Tryptophan synthase alp 25.4 38 0.0013 29.8 2.7 30 245-274 31-65 (262)
266 2ehj_A Uracil phosphoribosyltr 25.3 1.2E+02 0.0042 26.7 5.9 48 158-223 138-185 (208)
267 3mkc_A Racemase; metabolic pro 25.3 4E+02 0.014 25.0 9.9 114 158-282 160-303 (394)
268 3f4w_A Putative hexulose 6 pho 25.3 1.8E+02 0.0061 24.1 6.7 73 201-282 42-126 (211)
269 2qq6_A Mandelate racemase/muco 25.1 2.7E+02 0.0094 26.0 8.7 60 154-220 149-218 (410)
270 2aaa_A Alpha-amylase; glycosid 25.1 77 0.0026 30.2 4.9 125 154-279 41-222 (484)
271 1i5e_A Uracil phosphoribosyltr 25.0 1.2E+02 0.0041 26.4 5.8 46 158-220 139-184 (209)
272 3e96_A Dihydrodipicolinate syn 24.9 1.8E+02 0.0061 26.8 7.2 104 158-294 34-144 (316)
273 2j4d_A Cryptochrome 3, cryptoc 24.8 55 0.0019 32.4 3.9 76 94-178 40-121 (525)
274 2e1d_A Transaldolase; pentose 24.8 30 0.001 33.0 1.9 40 249-292 169-232 (331)
275 2a4a_A Deoxyribose-phosphate a 24.7 41 0.0014 31.5 2.8 100 158-282 107-214 (281)
276 1vs1_A 3-deoxy-7-phosphoheptul 24.4 1.5E+02 0.0051 27.3 6.5 44 159-210 161-206 (276)
277 2wqp_A Polysialic acid capsule 24.3 1.3E+02 0.0046 28.8 6.4 94 158-285 162-273 (349)
278 2xij_A Methylmalonyl-COA mutas 24.3 49 0.0017 35.1 3.6 49 242-293 641-692 (762)
279 3lab_A Putative KDPG (2-keto-3 24.1 85 0.0029 28.3 4.7 51 145-217 114-164 (217)
280 1gjw_A Maltodextrin glycosyltr 24.0 65 0.0022 32.2 4.3 69 158-228 121-211 (637)
281 2y88_A Phosphoribosyl isomeras 23.9 2.7E+02 0.0092 23.5 7.7 48 158-217 32-79 (244)
282 1tqx_A D-ribulose-5-phosphate 23.8 2.1E+02 0.0072 25.3 7.3 38 237-282 180-223 (227)
283 3il0_A Aminopeptidase P; XAA-P 23.7 42 0.0014 25.8 2.3 36 269-304 4-40 (131)
284 2e55_A Uracil phosphoribosyltr 23.7 1.1E+02 0.0039 27.0 5.4 45 158-219 136-180 (208)
285 3aml_A OS06G0726400 protein; s 23.5 4.2E+02 0.014 27.6 10.4 104 154-263 199-341 (755)
286 1r5j_A Putative phosphotransac 23.4 30 0.001 32.2 1.6 44 166-215 199-243 (337)
287 3ojc_A Putative aspartate/glut 23.4 1.6E+02 0.0055 25.8 6.3 62 242-303 59-136 (231)
288 1req_A Methylmalonyl-COA mutas 22.9 55 0.0019 34.6 3.6 49 242-293 633-684 (727)
289 2w6r_A Imidazole glycerol phos 22.6 2.7E+02 0.0091 24.0 7.5 99 148-284 23-124 (266)
290 1xrs_B D-lysine 5,6-aminomutas 22.4 67 0.0023 29.6 3.8 93 195-291 102-219 (262)
291 3tjl_A NADPH dehydrogenase; OL 22.3 1.7E+02 0.0058 28.5 6.8 103 160-266 171-286 (407)
292 3hgj_A Chromate reductase; TIM 21.9 4.7E+02 0.016 24.1 9.6 78 154-264 237-316 (349)
293 2pgw_A Muconate cycloisomerase 21.9 2E+02 0.0069 26.7 7.0 48 158-219 150-197 (384)
294 3lrk_A Alpha-galactosidase 1; 21.8 3.2E+02 0.011 27.4 8.8 109 158-285 48-179 (479)
295 2wan_A Pullulanase; hydrolase, 21.8 95 0.0033 33.0 5.3 123 159-283 471-642 (921)
296 3ivs_A Homocitrate synthase, m 21.4 2.2E+02 0.0076 27.9 7.4 88 160-270 113-204 (423)
297 1mxg_A Alpha amylase; hyperthe 21.3 1E+02 0.0036 29.1 5.0 86 124-225 6-113 (435)
298 1vp8_A Hypothetical protein AF 21.3 2.9E+02 0.01 25.0 7.6 99 159-296 32-133 (201)
299 2ya0_A Putative alkaline amylo 21.2 1.7E+02 0.0057 29.9 6.7 23 158-180 181-203 (714)
300 2yw3_A 4-hydroxy-2-oxoglutarat 21.1 1.9E+02 0.0065 24.9 6.3 43 160-217 114-156 (207)
301 2nql_A AGR_PAT_674P, isomerase 21.0 3E+02 0.01 25.6 8.0 48 158-219 167-215 (388)
302 3aam_A Endonuclease IV, endoiv 21.0 2E+02 0.0067 24.4 6.3 108 158-283 15-128 (270)
303 1j0h_A Neopullulanase; beta-al 20.9 1.5E+02 0.0052 29.2 6.2 122 154-283 174-348 (588)
304 3ble_A Citramalate synthase fr 20.9 80 0.0027 29.4 4.0 82 151-266 164-245 (337)
305 3r4e_A Mandelate racemase/muco 20.8 5.4E+02 0.019 24.4 10.6 136 154-293 143-328 (418)
306 2wc7_A Alpha amylase, catalyti 20.5 1.1E+02 0.0036 29.2 4.8 121 158-283 57-231 (488)
307 3nl6_A Thiamine biosynthetic b 20.3 6.6E+02 0.022 25.1 11.7 94 158-268 26-140 (540)
308 3pn9_A Proline dipeptidase; st 20.2 75 0.0025 24.5 3.1 33 271-303 5-38 (138)
No 1
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=100.00 E-value=4.4e-112 Score=809.85 Aligned_cols=234 Identities=40% Similarity=0.688 Sum_probs=216.8
Q ss_pred CCCCcccCCCCCCCCCcCCCChhhHhhhccCCCCCCCceeeEEEeeCCC-CcccCCCCCceEecchhhHHHHHHHHHHcC
Q 020319 92 AGTPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVG 170 (327)
Q Consensus 92 ~g~p~~~~~~~~~R~RRlR~~~~lR~l~~Et~Ls~~dLI~PlFV~eg~~-~~~I~SMPGv~r~sid~~l~~ev~~~~~lG 170 (327)
.|||.+.|++. +|+||||+|+++|+|++||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++|
T Consensus 2 ~~tp~~~~~p~-~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~lG 79 (337)
T 1w5q_A 2 SFTPANRAYPY-TRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSID-QLLIEAEEWVALG 79 (337)
T ss_dssp ----CCCCTTT-CCTTTTTSSHHHHHHHCCCCCCGGGEEEEEEEESSSSCEEECTTSTTCEEEEHH-HHHHHHHHHHHTT
T ss_pred CCCccCCCCCC-CCCCcCCCChHHHHHHhcCCCCHHHceeeEEEecCCCCccccCCCCCceeeCHH-HHHHHHHHHHHCC
Confidence 59999999988 7999999999999999999999999999999999996 7999999999999997 7999999999999
Q ss_pred CCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHH
Q 020319 171 VNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCK 250 (327)
Q Consensus 171 I~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak 250 (327)
|++|+|||++|+++||+.||+||||||+||||||+||++||||+|||||||||||+||||||++++|.|+||+||++|+|
T Consensus 80 i~~v~LFgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc~YT~HGHcGil~~~g~V~ND~Tl~~L~k 159 (337)
T 1w5q_A 80 IPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCEFTTHGQCGILDDDGYVLNDVSIDVLVR 159 (337)
T ss_dssp CCEEEEEECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSCBCHHHHHHHHHH
T ss_pred CCEEEEecCCCcccCCcccCccCCCCChHHHHHHHHHHHCCCeEEEEeeecccCCCCCcceeeCCCCcCccHHHHHHHHH
Confidence 99999999888777999999999999999999999999999999999999999999999999976899999999999999
Q ss_pred HHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeeehhhhhhccccchhHHHhhcCCCC--CCCcccCCCCCC
Q 020319 251 QAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRF--GDKKTKLQRGSS 327 (327)
Q Consensus 251 ~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYSAKyASsfYGPFRdAa~Sap~f--GDRktYQmdp~~ 327 (327)
|||+||+||||||||||||||||++||++||++||++|+||||||||||+||||||||++|+|+| ||||||||||+.
T Consensus 160 ~Als~A~AGADiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN 238 (337)
T 1w5q_A 160 QALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPAN 238 (337)
T ss_dssp HHHHHHHTTCSEEEECSCCTTHHHHHHHHHHHTTCTTCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTTC
T ss_pred HHHHHHHcCCCeEecccccccHHHHHHHHHHHCCCCCceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 999999999974
No 2
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=100.00 E-value=1.9e-110 Score=802.55 Aligned_cols=235 Identities=54% Similarity=0.877 Sum_probs=227.4
Q ss_pred CCCCCCCcccCCCCCCCCCcCCCChhhHhhhccCCCCCCCceeeEEEeeCCCCcccCCCCCceEecchhhHHHHHHHHHH
Q 020319 89 AAPAGTPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARD 168 (327)
Q Consensus 89 ~~~~g~p~~~~~~~~~R~RRlR~~~~lR~l~~Et~Ls~~dLI~PlFV~eg~~~~~I~SMPGv~r~sid~~l~~ev~~~~~ 168 (327)
.+-.|+|.++++ +||||||+++++|+|++||+|+++||||||||+||++++||+|||||||||+| .|+++++++++
T Consensus 9 ~~~~~~~~v~~~---~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~I~SMPGv~r~sid-~l~~~~~~~~~ 84 (356)
T 3obk_A 9 NNNYGEVWLPIQ---ARPRRNRKNRAVRQLVQENLVKPSSLIYPLFVHDEETSVPIPSMPGQSRLSME-DLLKEVGEARS 84 (356)
T ss_dssp ECTTSCEECCCS---CCGGGGGSSHHHHHHHCCCCCCGGGEEEEEEEESSSSCEECTTSTTCEEECHH-HHHHHHHHHHH
T ss_pred cCCCCCEeeccC---CCCCcCCCCHHHHHHHhhcCCCHHHceeeEEEecCCCCcccCCCCCceEECHH-HHHHHHHHHHH
Confidence 566899988554 89999999999999999999999999999999999878999999999999997 79999999999
Q ss_pred cCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecC-CCccccHHHHHH
Q 020319 169 VGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQ 247 (327)
Q Consensus 169 lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~-~G~IdND~Tv~~ 247 (327)
+||++|+|||++++++||+.||+||||||+||||||+||++||||+|||||||||||+||||||+++ +|.|+||+||++
T Consensus 85 lGi~av~LFgv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~P~l~VitDVcLc~YT~HGHcGil~~~~g~V~ND~Tl~~ 164 (356)
T 3obk_A 85 YGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQ 164 (356)
T ss_dssp TTCCEEEEEEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHSTTCEEEEEECSGGGBTTCCSSCBCTTTCCBCHHHHHHH
T ss_pred CCCCEEEEecCCCcccCCcccccccCCCChHHHHHHHHHHHCCCCEEEEeeccccccCCCcceeeeCCCCCCCCHHHHHH
Confidence 9999999999988889999999999999999999999999999999999999999999999999976 499999999999
Q ss_pred HHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeeehhhhhhccccchhHHHhhcC-CCCCCCcccCCCCC
Q 020319 248 LCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSN-PRFGDKKTKLQRGS 326 (327)
Q Consensus 248 Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYSAKyASsfYGPFRdAa~Sa-p~fGDRktYQmdp~ 326 (327)
|+||||+||+||||||||||||||||++||++||++||++|+||||||||||+||||||||++|+ |+|||||||||||+
T Consensus 165 Lak~Als~A~AGADiVAPSdMMDGrV~aIR~aLd~~G~~~v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpa 244 (356)
T 3obk_A 165 LCKQAITLARAGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPS 244 (356)
T ss_dssp HHHHHHHHHHHTCSEEEECSCCTTHHHHHHHHHHHTTCTTSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTT
T ss_pred HHHHHHHHHHcCCCeEeccccccCHHHHHHHHHHHCCCCCcceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999997
Q ss_pred C
Q 020319 327 S 327 (327)
Q Consensus 327 ~ 327 (327)
.
T Consensus 245 N 245 (356)
T 3obk_A 245 N 245 (356)
T ss_dssp C
T ss_pred C
Confidence 4
No 3
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=100.00 E-value=3.1e-110 Score=794.96 Aligned_cols=227 Identities=50% Similarity=0.831 Sum_probs=216.1
Q ss_pred ccCCCCCCCCCcCCCChhhHhhhccCCCCCCCceeeEEEeeCCC-CcccCCCCCceEecchhhHHHHHHHHHHcCCCeEE
Q 020319 97 VPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVV 175 (327)
Q Consensus 97 ~~~~~~~~R~RRlR~~~~lR~l~~Et~Ls~~dLI~PlFV~eg~~-~~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVl 175 (327)
++++++.+|+||||+|+++|+|++||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++||++|+
T Consensus 4 ~~~l~~~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~lGi~~v~ 82 (328)
T 1w1z_A 4 LDLLNIVHRPRRLRRTAALRNLVQENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTID-RAVEECKELYDLGIQGID 82 (328)
T ss_dssp ------CCCGGGGTSSHHHHHHHCCCCCCGGGEEEEEEEESSSSCEEEETTEEEEEEEEHH-HHHHHHHHHHHHTCCEEE
T ss_pred cCcCCcccCCCcCCCChHHHHHHhcCcCCHHHceeeEEEecCCCCccccCCCCCeeEeCHH-HHHHHHHHHHHCCCCEEE
Confidence 56788889999999999999999999999999999999999996 7999999999999997 799999999999999999
Q ss_pred EeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHH
Q 020319 176 LFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQ 255 (327)
Q Consensus 176 LFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~ 255 (327)
|||+ |+ .||+.||+||||||+||||||+||++||||+|||||||||||+||||||++ +|.|+||+||++|+||||+|
T Consensus 83 LFgv-p~-~Kd~~gs~A~~~~g~v~rair~iK~~~p~l~vitDvcLc~YT~HGHcGil~-~g~V~ND~Tl~~L~k~Als~ 159 (328)
T 1w1z_A 83 LFGI-PE-QKTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVK-DGIILNDETVEVLQKMAVSH 159 (328)
T ss_dssp EEEC-CS-SCCSSCGGGGCTTSHHHHHHHHHHHHSTTSEEEEEECSTTTSTTSCSSEES-SSCEEHHHHHHHHHHHHHHH
T ss_pred EECC-CC-CCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccCCCCCceeecc-CCcCccHHHHHHHHHHHHHH
Confidence 9997 64 599999999999999999999999999999999999999999999999996 79999999999999999999
Q ss_pred HHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeeehhhhhhccccchhHHHhhcCCCCCCCcccCCCCCC
Q 020319 256 ARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTKLQRGSS 327 (327)
Q Consensus 256 A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYSAKyASsfYGPFRdAa~Sap~fGDRktYQmdp~~ 327 (327)
|+||||||||||||||||++||++||++||++|+||||||||||+||||||||++|+|+|||||||||||+.
T Consensus 160 A~AGADiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN 231 (328)
T 1w1z_A 160 AEAGADFVSPSDMMDGRIGAIREALDETDHSDVGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPAN 231 (328)
T ss_dssp HHHTCSEEEECSCCTTHHHHHHHHHHHTTCTTSEEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTC
T ss_pred HHcCCCeEecccccccHHHHHHHHHHhCCCCCceeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=100.00 E-value=6.4e-108 Score=777.83 Aligned_cols=222 Identities=43% Similarity=0.702 Sum_probs=215.6
Q ss_pred CCCCCCCcCCCChhhHhhhccCCCCCCCceeeEEEeeCCC-CcccCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeec
Q 020319 101 PLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPK 179 (327)
Q Consensus 101 ~~~~R~RRlR~~~~lR~l~~Et~Ls~~dLI~PlFV~eg~~-~~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgv 179 (327)
+|.+||||||+|+++|+|++||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++||++|+|||+
T Consensus 2 ~m~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~lGi~~v~LFgv 80 (323)
T 1l6s_A 2 DLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEK-HLAREIERIANAGIRSVMTFGI 80 (323)
T ss_dssp CCSCCGGGGGSSHHHHHHHCCCCCCGGGEEEEEEEETTCSSCEECTTSTTCEEEEGG-GHHHHHHHHHHHTCCEEEEEEE
T ss_pred cccccCCccCCChHHHHHhhcCcCCHHHceeeEEEecCCCCccccCCCCCceeeCHH-HHHHHHHHHHHCCCCEEEEeCC
Confidence 3568999999999999999999999999999999999996 7999999999999997 7999999999999999999997
Q ss_pred CCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcC
Q 020319 180 VPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAG 259 (327)
Q Consensus 180 i~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AG 259 (327)
|+ .||+.||+||||||+||||||+||++||||+|||||||||||+||||||++ +|.|+||+||++|+||||+||+||
T Consensus 81 -p~-~Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc~YT~HGHcGil~-~g~V~ND~Tl~~Lak~Als~A~AG 157 (323)
T 1l6s_A 81 -SH-HTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLC-EHGVDNDATLENLGKQAVVAAAAG 157 (323)
T ss_dssp -CS-SCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBSSCCSSCBC-SSSBCHHHHHHHHHHHHHHHHHHT
T ss_pred -CC-CCCccccccCCCCCcHHHHHHHHHHHCCCeEEEEeeeccccCCCCceEecc-CCcCccHHHHHHHHHHHHHHHHcC
Confidence 64 599999999999999999999999999999999999999999999999995 799999999999999999999999
Q ss_pred CCeecCCCCCCchHHHHHHHHHHCCCCCceeeehhhhhhccccchhHHHhhcCCCCCCCcccCCCCCC
Q 020319 260 ADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTKLQRGSS 327 (327)
Q Consensus 260 ADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYSAKyASsfYGPFRdAa~Sap~fGDRktYQmdp~~ 327 (327)
||||||||||||||++||++||++||++|+||||||||||+||||||||++|+|+ ||||||||||+.
T Consensus 158 AdiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~-GDRktYQmdpaN 224 (323)
T 1l6s_A 158 ADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALK-GDRKSYQMNPMN 224 (323)
T ss_dssp CSEEEECSCCTTHHHHHHHHHHHTTCTTCEEBCCCEEBCCSCCHHHHHHHTCCCS-SCCTTTSBCTTC
T ss_pred CCeEecccccccHHHHHHHHHHhCCCCCceeeehhHHHhHHhhHHHHHHhcCCCC-CCccccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999 999999999974
No 5
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=100.00 E-value=6.6e-106 Score=769.05 Aligned_cols=228 Identities=32% Similarity=0.529 Sum_probs=220.1
Q ss_pred CCCCCCCCCcCCCChhhHhhhccCCCCCCCceeeEEEeeCCC-CcccCCCCCceEecchhhHHHHHHHHHHcCCCeEEEe
Q 020319 99 SLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF 177 (327)
Q Consensus 99 ~~~~~~R~RRlR~~~~lR~l~~Et~Ls~~dLI~PlFV~eg~~-~~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLF 177 (327)
++++.+++++.+.|+++|+|++||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++||++|+||
T Consensus 11 ~~~~~~~l~~g~~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~lGi~~v~LF 89 (342)
T 1h7n_A 11 PTEISSVLAGGYNHPLLRQWQSERQLTKNMLIFPLFISDNPDDFTEIDSLPNINRIGVN-RLKDYLKPLVAKGLRSVILF 89 (342)
T ss_dssp CCCGGGCCGGGSSSHHHHHHTCSSCCCGGGEEEEEEEESSTTCEEECTTSTTCEEECHH-HHHHHHHHHHHTTCCEEEEE
T ss_pred CCCcccccccccCCHHHHHHHhcCcCCHHHceeeEEEecCCCCceeCCCCCCceeeCHH-HHHHHHHHHHHCCCCEEEEe
Confidence 356778999999999999999999999999999999999996 7999999999999997 79999999999999999999
Q ss_pred ecCCCC-CCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHH
Q 020319 178 PKVPDA-LKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQA 256 (327)
Q Consensus 178 gvi~~~-~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A 256 (327)
|++++. .||+.||+||||||+||||||+||++||||+|||||||||||+||||||++++|.|+||+||++|+||||+||
T Consensus 90 gv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc~YT~HGHcGil~~~g~V~ND~Tl~~Lak~Als~A 169 (342)
T 1h7n_A 90 GVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYA 169 (342)
T ss_dssp EECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSSBCHHHHHHHHHHHHHHHH
T ss_pred cccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCccHHHHHHHHHHHHHHH
Confidence 986643 6999999999999999999999999999999999999999999999999976899999999999999999999
Q ss_pred HcCCCeecCCCCCCchHHHHHHHHHHCCC-CCceeeehhhhhhccccchhHHHhhcCCCCCCCcccCCCCCC
Q 020319 257 RAGADVVSPSDMMDGRVGAIRAALDAEGF-QHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTKLQRGSS 327 (327)
Q Consensus 257 ~AGADiVAPSDMMDGRV~aIR~aLD~~Gf-~~v~IMSYSAKyASsfYGPFRdAa~Sap~fGDRktYQmdp~~ 327 (327)
+||||||||||||||||++||++||++|| ++|+||||||||||+||||||||++|+|+|||||||||||+.
T Consensus 170 ~AGAdiVAPSdMMDGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN 241 (342)
T 1h7n_A 170 KAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAG 241 (342)
T ss_dssp HHTCSEEEECCCCTTHHHHHHHHHHHTTCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTC
T ss_pred HcCCCeeecccccccHHHHHHHHHHHCCCccCceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCC
Confidence 99999999999999999999999999999 999999999999999999999999999999999999999974
No 6
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=100.00 E-value=3.3e-105 Score=761.44 Aligned_cols=225 Identities=37% Similarity=0.639 Sum_probs=169.6
Q ss_pred CCCCCCCcCCCChhhHhhhc-cCCCCCCCceeeEEEeeCCC-CcccCCCCCceEecchhhHHHHHHHHHHcCCCeEEEee
Q 020319 101 PLSRRPRRNRKSPAMRASFQ-ETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFP 178 (327)
Q Consensus 101 ~~~~R~RRlR~~~~lR~l~~-Et~Ls~~dLI~PlFV~eg~~-~~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFg 178 (327)
++.+++++.+.|+++|+|++ ||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++||++|+|||
T Consensus 2 ~~~~~l~~g~~~~~~R~lv~~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~~Gi~~v~LFg 80 (330)
T 1pv8_A 2 QPQSVLHSGYLHPLLRAWQTATTTLNASNLIYPIFVTDVPDDIQPITSLPGVARYGVK-RLEEMLRPLVEEGLRCVLIFG 80 (330)
T ss_dssp ---------CCCHHHHHHHTTTTCCCGGGEEEEEEECSCTTCEEECSSSTTCEEECHH-HHHHHHHHHHHHTCCEEEEEE
T ss_pred CcccccccccCCHHHHHHHhcCCccCHHHceeeEEEecCCCCccccCCCCCceeecHH-HHHHHHHHHHHCCCCEEEEec
Confidence 34568999999999999999 99999999999999999996 7999999999999997 799999999999999999999
Q ss_pred cCCCC-CCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHH
Q 020319 179 KVPDA-LKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQAR 257 (327)
Q Consensus 179 vi~~~-~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~ 257 (327)
+ |++ .||+.||+||||||+||||||+||++||||+|||||||||||+||||||++++|.|+||+||++|+||||+||+
T Consensus 81 v-p~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vitDvcLc~YT~HGHcGil~~~g~v~ND~Tl~~La~~Als~A~ 159 (330)
T 1pv8_A 81 V-PSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAK 159 (330)
T ss_dssp C-C--------------CCSHHHHHHHHHHHHSTTSEEEEEECCC---------------CHHHHHHHHHHHHHHHHHHH
T ss_pred C-CcccCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCccHHHHHHHHHHHHHHHH
Confidence 7 554 39999999999999999999999999999999999999999999999999767999999999999999999999
Q ss_pred cCCCeecCCCCCCchHHHHHHHHHHCCCCC-ceeeehhhhhhccccchhHHHhhcCCCCCCCcccCCCCCC
Q 020319 258 AGADVVSPSDMMDGRVGAIRAALDAEGFQH-VSIMSYTAKYASSFYGPFREALDSNPRFGDKKTKLQRGSS 327 (327)
Q Consensus 258 AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~-v~IMSYSAKyASsfYGPFRdAa~Sap~fGDRktYQmdp~~ 327 (327)
||||||||||||||||++||++||++||++ |+||||||||||+||||||||++|+|+|||||||||||+.
T Consensus 160 AGAdiVAPSdMMDGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN 230 (330)
T 1pv8_A 160 AGCQVVAPSDMMDGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGA 230 (330)
T ss_dssp HTCSEEEECC--CCHHHHHHHHHHHTTCTTTCEEBCCCEECCCGGGHHHHHCC-------------CCTTC
T ss_pred cCCCeeecccccccHHHHHHHHHHhCCCcCCceEeehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCC
Confidence 999999999999999999999999999988 9999999999999999999999999999999999999974
No 7
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=89.46 E-value=1.6 Score=39.45 Aligned_cols=46 Identities=15% Similarity=0.348 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHH------------------HHHHHHHHCCCe
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPR------------------TIWLLKDRYPDL 213 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~r------------------AIr~iK~~fPdl 213 (327)
...+.++.+.+.|+..|.| |+ |- -|+. -||++.+ .|+.||+.++++
T Consensus 32 ~~~~~~~~l~~~GaD~iei-g~-P~--sdp~------~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (268)
T 1qop_A 32 QSLKIIDTLIDAGADALEL-GV-PF--SDPL------ADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTI 95 (268)
T ss_dssp HHHHHHHHHHHTTCSSEEE-EC-CC--SCCT------TCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHCCCCEEEE-CC-CC--CCcc------CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 4788899999999999887 53 42 2221 1455554 489999886543
No 8
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=89.24 E-value=5.5 Score=34.33 Aligned_cols=51 Identities=14% Similarity=0.253 Sum_probs=36.6
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeee
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDV 219 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDV 219 (327)
-.++++.+.+.|...|.|-.. ..+++. +..+.+.|+.+|+.+|++.|+.++
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~---~~~~~~-------~~~~~~~i~~i~~~~~~~~v~~~~ 140 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCT---KRDRHD-------GLDIASFIRQVKEKYPNQLLMADI 140 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECC---SSCCTT-------CCCHHHHHHHHHHHCTTCEEEEEC
T ss_pred hHHHHHHHHHcCCCEEEEccc---ccCCCC-------CccHHHHHHHHHHhCCCCeEEEeC
Confidence 367888999999997755432 112111 236789999999999998888765
No 9
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=86.33 E-value=5.1 Score=37.59 Aligned_cols=95 Identities=17% Similarity=0.239 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi---------~--~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YT 225 (327)
+..+.++.+.+.|...|-|-+-= | +.-.|+.|-.--|.--++.+.|+++|+.++ |..|...+..++|.
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~ 232 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWG 232 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCS
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccccc
Confidence 35555667889999999996531 2 223455554333333356788999999996 78788888877763
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 020319 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 226 shGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS 266 (327)
.. | .+-+++ .+.|-.+.++|+|.|.-|
T Consensus 233 ~~---------g-~~~~~~----~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 233 EG---------G-WSLEDT----LAFARRLKELGVDLLDCS 259 (349)
T ss_dssp TT---------S-CCHHHH----HHHHHHHHHTTCCEEEEE
T ss_pred CC---------C-CCHHHH----HHHHHHHHHcCCCEEEEe
Confidence 21 2 222333 446666788999998866
No 10
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=86.11 E-value=7.5 Score=36.74 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCccccc---CcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeec
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE---AYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR 234 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~---A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~ 234 (327)
.+.+-++.+.+.|+.+|.|=+-+.+ +| +|.- ..-+-.-...-|++++++-++++|++=.-- +
T Consensus 105 ~v~~~v~~l~~aGaagv~iED~~~~-kr--cGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda--~---------- 169 (305)
T 3ih1_A 105 NVARTAVEMVEAKVAAVQIEDQQLP-KK--CGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDA--R---------- 169 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCSS-CC--TTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECC--H----------
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCC-cc--cCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeecc--c----------
Confidence 4778888999999999999664322 12 2221 122222345567777777677766642110 0
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHH
Q 020319 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAAL 280 (327)
Q Consensus 235 ~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aL 280 (327)
..+.++.+.+-|..|++||||+|=+-.+-| -.+.+|.+++
T Consensus 170 ------~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~ 210 (305)
T 3ih1_A 170 ------GVEGLDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKV 210 (305)
T ss_dssp ------HHHCHHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS
T ss_pred ------cccCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc
Confidence 012367777899999999999998877766 5566666665
No 11
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=85.87 E-value=4.5 Score=38.52 Aligned_cols=100 Identities=15% Similarity=0.082 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCccccc---CcCCCCcHHHHHHHHHHHC--CCeeEEeeecccCCCCCCccee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE---AYNDNGLVPRTIWLLKDRY--PDLVIYTDVALDPYSSDGHDGI 232 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~---A~n~~glV~rAIr~iK~~f--Pdl~VitDVcLc~YTshGHcGI 232 (327)
.+.+-++++.+.|+..|.|=+-... +| +|-- ..-|-.-...-|+++++.. ++.+|++
T Consensus 117 ~v~~tv~~l~~aGaagv~iED~~~~-k~--cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~A--------------- 178 (318)
T 1zlp_A 117 NVQRFIRELISAGAKGVFLEDQVWP-KK--CGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVA--------------- 178 (318)
T ss_dssp HHHHHHHHHHHTTCCEEEEECBCSS-CC--CSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEE---------------
T ss_pred HHHHHHHHHHHcCCcEEEECCCCCC-cc--ccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEE---------------
Confidence 4888899999999999998554211 12 2211 1333334455667777664 5555554
Q ss_pred ecCCCcccc--HHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHH
Q 020319 233 VREDGVIMN--DETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAAL 280 (327)
Q Consensus 233 l~~~G~IdN--D~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aL 280 (327)
+.|. ..-++.+.+-|..|++||||+|=+-.+-| -.+..|.++|
T Consensus 179 -----Rtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l 224 (318)
T 1zlp_A 179 -----RTDARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKT 224 (318)
T ss_dssp -----EECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS
T ss_pred -----eeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc
Confidence 2221 23467888899999999999998877777 6677777776
No 12
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=85.47 E-value=6.8 Score=37.11 Aligned_cols=103 Identities=16% Similarity=0.073 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHH---HHHHHHH----CCCeeEEeeecccCCCCCCcc
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRT---IWLLKDR----YPDLVIYTDVALDPYSSDGHD 230 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rA---Ir~iK~~----fPdl~VitDVcLc~YTshGHc 230 (327)
.+.+-++++.+.|+..|.|=+.+.+ +| +|--.-.+==+...+ |++.++. -|+++|++=+- .|.
T Consensus 104 ~v~~~v~~l~~aGaagv~iEDq~~~-k~--cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTD--a~~----- 173 (307)
T 3lye_A 104 MVARTVEHYIRSGVAGAHLEDQILT-KR--CGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTD--ALQ----- 173 (307)
T ss_dssp HHHHHHHHHHHTTCCEEEECCBCCC-C----------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC--CHH-----
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCCC-cc--cCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEech--hhh-----
Confidence 4778888999999999998554322 12 221110111123333 4444433 47888886221 111
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHH
Q 020319 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALD 281 (327)
Q Consensus 231 GIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD 281 (327)
...++...+-|..|++||||+|=+-.+-| ..+.+|.++++
T Consensus 174 -----------~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 174 -----------SLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALA 214 (307)
T ss_dssp -----------HHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT
T ss_pred -----------ccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc
Confidence 01245555578899999999998877776 57777877775
No 13
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=84.90 E-value=8.5 Score=36.05 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCc-ccccCcCCCCcHHHHHHHHHHHC--CCeeEEeeecccCCCCCCcceeec
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSP-TGDEAYNDNGLVPRTIWLLKDRY--PDLVIYTDVALDPYSSDGHDGIVR 234 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~-~Gs~A~n~~glV~rAIr~iK~~f--Pdl~VitDVcLc~YTshGHcGIl~ 234 (327)
.+.+-++++.+.|+..|.|=+-..+ +|-. .|....-|..-...-|++++++- +++.|++
T Consensus 95 ~~~~~v~~l~~aGa~gv~iEd~~~~-k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~a----------------- 156 (295)
T 1xg4_A 95 NVARTVKSMIKAGAAGLHIEDQVGA-KRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMA----------------- 156 (295)
T ss_dssp HHHHHHHHHHHHTCSEEEEECBCSS-CCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEE-----------------
T ss_pred HHHHHHHHHHHcCCeEEEECCCCCC-cccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEE-----------------
Confidence 4788889999999999998543211 1211 11122334444555677777664 4444443
Q ss_pred CCCcccc--HHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHH
Q 020319 235 EDGVIMN--DETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALD 281 (327)
Q Consensus 235 ~~G~IdN--D~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD 281 (327)
+.|. ...++.+.+-|..+++||||+|-+-.+-| -.+..|.++|+
T Consensus 157 ---Rtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~ 203 (295)
T 1xg4_A 157 ---RTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ 203 (295)
T ss_dssp ---EECCHHHHCHHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC
T ss_pred ---ecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC
Confidence 1111 23467788899999999999998887776 67788888874
No 14
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=84.78 E-value=4.7 Score=41.47 Aligned_cols=99 Identities=21% Similarity=0.263 Sum_probs=62.8
Q ss_pred chhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeec
Q 020319 155 WRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR 234 (327)
Q Consensus 155 id~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~ 234 (327)
+.++-.+.++.|++.|+.-+.| +.. .|.. --+..+|+.||+.||++.||+
T Consensus 278 v~~d~~eR~~aLv~AGvD~ivi----D~a----hGhs-----~~v~~~i~~ik~~~p~~~via----------------- 327 (556)
T 4af0_A 278 TRPGDKDRLKLLAEAGLDVVVL----DSS----QGNS-----VYQIEFIKWIKQTYPKIDVIA----------------- 327 (556)
T ss_dssp SSHHHHHHHHHHHHTTCCEEEE----CCS----CCCS-----HHHHHHHHHHHHHCTTSEEEE-----------------
T ss_pred cCccHHHHHHHHHhcCCcEEEE----ecc----cccc-----HHHHHHHHHHHhhCCcceEEe-----------------
Confidence 3345688899999999986655 221 2222 237889999999999998887
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCee----cCCC-----CC----CchHHHHHHHHHHCCCCCceeee
Q 020319 235 EDGVIMNDETVHQLCKQAVSQARAGADVV----SPSD-----MM----DGRVGAIRAALDAEGFQHVSIMS 292 (327)
Q Consensus 235 ~~G~IdND~Tv~~Lak~Als~A~AGADiV----APSD-----MM----DGRV~aIR~aLD~~Gf~~v~IMS 292 (327)
|-|- | .++|..+.+||||.| .|-. ++ -.++.||.+.-+.+.-..|+|++
T Consensus 328 --GNVa---T----~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIA 389 (556)
T 4af0_A 328 --GNVV---T----REQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIA 389 (556)
T ss_dssp --EEEC---S----HHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred --cccc---C----HHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEe
Confidence 2221 1 235666777888876 3332 22 24677777666554333566654
No 15
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=83.32 E-value=11 Score=34.94 Aligned_cols=107 Identities=20% Similarity=0.195 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHH----CCCeeEEeeecccCCCCCCcceee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDR----YPDLVIYTDVALDPYSSDGHDGIV 233 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~----fPdl~VitDVcLc~YTshGHcGIl 233 (327)
.+.+.++++.+.|+..|.|=+-+.. .|. ..-+-.-...-|+++++. -+++.|++=. |.|.. |
T Consensus 93 ~~~~~v~~l~~aGaagv~iED~~~~-----~~k-~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRt--da~~~-~----- 158 (275)
T 2ze3_A 93 DVRRTVEHFAALGVAGVNLEDATGL-----TPT-ELYDLDSQLRRIEAARAAIDASGVPVFLNART--DTFLK-G----- 158 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCSS-----SSS-CBCCHHHHHHHHHHHHHHHHHHTSCCEEEEEC--CTTTT-T-----
T ss_pred HHHHHHHHHHHcCCcEEEECCCcCC-----CCC-ccCCHHHHHHHHHHHHHhHhhcCCCeEEEEec--hhhhc-c-----
Confidence 4788899999999999998554211 111 122222345667777776 4566666522 22211 1
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHH
Q 020319 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALD 281 (327)
Q Consensus 234 ~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD 281 (327)
.|.= ..+.++.+.+-|..|++||||+|=+-.+-| -.+..|.++|+
T Consensus 159 --~g~~-~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 159 --HGAT-DEERLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALR 204 (275)
T ss_dssp --CSSS-HHHHHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS
T ss_pred --cccc-chhhHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC
Confidence 0100 124688888899999999999998877776 66777777663
No 16
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=81.83 E-value=5.2 Score=36.02 Aligned_cols=48 Identities=15% Similarity=0.249 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHH------------------HHHHHHHHCCCeeE
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPR------------------TIWLLKDRYPDLVI 215 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~r------------------AIr~iK~~fPdl~V 215 (327)
..++.++.+.+.|+..|.| |. |- -|+ . -||++.+ .++.+|+.+|++-|
T Consensus 32 ~~~~~~~~l~~~G~D~IEl-G~-P~--sdP-----~-adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi 97 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEI-GF-PF--SDP-----V-ADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPF 97 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEE-EC-CC--SCC-----T-TSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCE
T ss_pred HHHHHHHHHHHcCCCEEEE-CC-CC--CCc-----c-cccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCE
Confidence 4677888999999999888 53 42 122 1 1466554 38999999866443
No 17
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=81.03 E-value=5.1 Score=37.67 Aligned_cols=108 Identities=19% Similarity=0.180 Sum_probs=67.6
Q ss_pred ceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCc
Q 020319 150 CYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGH 229 (327)
Q Consensus 150 v~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGH 229 (327)
=|..+.. ..++-+.++.+.|..+|-|=+- .-+...|+++.++- +-|+..+-|-|=+.|--
T Consensus 89 sy~~s~~-~a~~na~rl~kaGa~aVklEdg-----------------~e~~~~I~al~~ag--IpV~gHiGLtPQs~~~~ 148 (275)
T 1o66_A 89 AYQQSKE-QAFAAAAELMAAGAHMVKLEGG-----------------VWMAETTEFLQMRG--IPVCAHIGLTPQSVFAF 148 (275)
T ss_dssp SSSSCHH-HHHHHHHHHHHTTCSEEEEECS-----------------GGGHHHHHHHHHTT--CCEEEEEESCGGGTTC-
T ss_pred CccCCHH-HHHHHHHHHHHcCCcEEEECCc-----------------HHHHHHHHHHHHcC--CCeEeeeccCceeeccc
Confidence 4455554 5788888888899999887431 13566788888763 34666555666554444
Q ss_pred ceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHH
Q 020319 230 DGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALD 281 (327)
Q Consensus 230 cGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD 281 (327)
.|..-. |+ . +..+.+.+.|..+.+||||+|=+-.+-.--..+|.++|+
T Consensus 149 ggf~v~-gr--t-~~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~it~~l~ 196 (275)
T 1o66_A 149 GGYKVQ-GR--G-GKAQALLNDAKAHDDAGAAVVLMECVLAELAKKVTETVS 196 (275)
T ss_dssp --------------CHHHHHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHCS
T ss_pred CCeEEE-eC--h-HHHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHhCC
Confidence 343321 22 1 346889999999999999999766654445666666663
No 18
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=80.99 E-value=4.3 Score=34.97 Aligned_cols=62 Identities=18% Similarity=0.112 Sum_probs=41.7
Q ss_pred HHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc-hHHHHHHH
Q 020319 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDG-RVGAIRAA 279 (327)
Q Consensus 201 rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDG-RV~aIR~a 279 (327)
..|+.||+.+|+.-|+.|+-|. |+-.|+.. ..+++|||+|.=.--+.. .+.+.++.
T Consensus 45 ~~i~~l~~~~p~~~v~lD~kl~-----------------dip~t~~~------~~~~~Gad~itvh~~~g~~~l~~~~~~ 101 (216)
T 1q6o_A 45 RAVRDLKALYPHKIVLADAKIA-----------------DAGKILSR------MCFEANADWVTVICCADINTAKGALDV 101 (216)
T ss_dssp HHHHHHHHHCTTSEEEEEEEEC-----------------SCHHHHHH------HHHHTTCSEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEEEec-----------------ccHHHHHH------HHHhCCCCEEEEeccCCHHHHHHHHHH
Confidence 4699999999999999999771 12344432 467889998865443333 36666666
Q ss_pred HHHCCC
Q 020319 280 LDAEGF 285 (327)
Q Consensus 280 LD~~Gf 285 (327)
+.+.|-
T Consensus 102 ~~~~g~ 107 (216)
T 1q6o_A 102 AKEFNG 107 (216)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 666665
No 19
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=80.76 E-value=8.3 Score=34.94 Aligned_cols=67 Identities=16% Similarity=0.235 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
..++.++.+++-|++.+-+ .. .++ + -.++|+.||++||+++|-+ |
T Consensus 26 ~a~~~a~al~~gGi~~iEv-t~-----~t~--------~--a~~~I~~l~~~~p~~~IGA-------------------G 70 (217)
T 3lab_A 26 HAIPMAKALVAGGVHLLEV-TL-----RTE--------A--GLAAISAIKKAVPEAIVGA-------------------G 70 (217)
T ss_dssp GHHHHHHHHHHTTCCEEEE-ET-----TST--------T--HHHHHHHHHHHCTTSEEEE-------------------E
T ss_pred HHHHHHHHHHHcCCCEEEE-eC-----CCc--------c--HHHHHHHHHHHCCCCeEee-------------------c
Confidence 5888899999999998766 21 111 1 2379999999999988866 4
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee-cCC
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVV-SPS 266 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiV-APS 266 (327)
.|.+-+ |+-...+|||++| +|.
T Consensus 71 TVlt~~-------~a~~ai~AGA~fivsP~ 93 (217)
T 3lab_A 71 TVCTAD-------DFQKAIDAGAQFIVSPG 93 (217)
T ss_dssp CCCSHH-------HHHHHHHHTCSEEEESS
T ss_pred cccCHH-------HHHHHHHcCCCEEEeCC
Confidence 455433 4445567888865 444
No 20
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=80.70 E-value=8.3 Score=35.04 Aligned_cols=46 Identities=15% Similarity=0.287 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDV 219 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDV 219 (327)
.+++.++.+++-|++.|=+ . .+++. -.++|+.|+++||+++|.+.+
T Consensus 47 ~a~~~a~al~~gGi~~iEv-t-----~~t~~----------a~e~I~~l~~~~~~~~iGaGT 92 (232)
T 4e38_A 47 DIIPLGKVLAENGLPAAEI-T-----FRSDA----------AVEAIRLLRQAQPEMLIGAGT 92 (232)
T ss_dssp GHHHHHHHHHHTTCCEEEE-E-----TTSTT----------HHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEE-e-----CCCCC----------HHHHHHHHHHhCCCCEEeECC
Confidence 5888999999999998776 1 12221 237999999999998887643
No 21
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=80.14 E-value=22 Score=33.43 Aligned_cols=102 Identities=18% Similarity=0.229 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHH---HHHC--CCeeEEeeecccCCCCCCccee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLL---KDRY--PDLVIYTDVALDPYSSDGHDGI 232 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~i---K~~f--Pdl~VitDVcLc~YTshGHcGI 232 (327)
.+.+-++++.+.|+..|.|=+-+-+ +| +|-..-.+==+...++..| +++- ++++|++=+- .|.
T Consensus 99 ~v~~~v~~l~~aGaagv~iEDq~~~-k~--cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTD--a~~------- 166 (298)
T 3eoo_A 99 NIARTIRSFIKAGVGAVHLEDQVGQ-KR--CGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTD--AAA------- 166 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCCC-CC--TTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEEC--THH-------
T ss_pred HHHHHHHHHHHhCCeEEEECCCCCC-cc--cCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeeh--hhh-------
Confidence 4788889999999999999665322 22 3322211111333344444 4443 6777776221 110
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHH
Q 020319 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAAL 280 (327)
Q Consensus 233 l~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aL 280 (327)
.+.++...+-|..|++||||+|=+-.+-| -.+.++.+++
T Consensus 167 ---------~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 167 ---------AEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAV 206 (298)
T ss_dssp ---------HHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHH
T ss_pred ---------hcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHc
Confidence 12355566688999999999998877754 3455666555
No 22
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=80.03 E-value=6.3 Score=35.13 Aligned_cols=52 Identities=17% Similarity=0.297 Sum_probs=38.6
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeeccc
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALD 222 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc 222 (327)
+.+ ++++.++.+++.||+.|-+ . .|+..+ .++|+.++++||+++|.+++-|+
T Consensus 27 ~~~-~~~~~~~al~~gGv~~iel-~-----~k~~~~----------~~~i~~l~~~~~~l~vgaGtvl~ 78 (224)
T 1vhc_A 27 NAD-DILPLADTLAKNGLSVAEI-T-----FRSEAA----------ADAIRLLRANRPDFLIAAGTVLT 78 (224)
T ss_dssp SGG-GHHHHHHHHHHTTCCEEEE-E-----TTSTTH----------HHHHHHHHHHCTTCEEEEESCCS
T ss_pred CHH-HHHHHHHHHHHcCCCEEEE-e-----ccCchH----------HHHHHHHHHhCcCcEEeeCcEee
Confidence 344 5889999999999997655 2 243322 35899999999999999887553
No 23
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=79.50 E-value=1.6 Score=39.81 Aligned_cols=45 Identities=31% Similarity=0.408 Sum_probs=35.4
Q ss_pred HHHHHHHHHcCCCeecC-----CCC-CCc--hHHHHHHHHHHCCCCCceeeehh
Q 020319 249 CKQAVSQARAGADVVSP-----SDM-MDG--RVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 249 ak~Als~A~AGADiVAP-----SDM-MDG--RV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
..||+.-|+|||+.||| .|. .|| .|..|++.++.+|| ++-||+=|
T Consensus 115 ~~QA~~Aa~AGa~yISPfvgRi~d~g~dG~~~v~~i~~~~~~~~~-~T~IlaAS 167 (223)
T 3s1x_A 115 PIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYII-KTQILVAS 167 (223)
T ss_dssp HHHHHHHHHTTCSEEEEBSHHHHHTTSCTHHHHHHHHHHHHHTTC-CSEEEEBS
T ss_pred HHHHHHHHHcCCeEEEeecchHhhcCCCHHHHHHHHHHHHHHcCC-CCEEEEEe
Confidence 45999999999999999 111 244 48999999999999 67788644
No 24
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=79.04 E-value=20 Score=33.50 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCccccc-----CcCCCCcHHHHHHHHHHHC--CCeeEEeeecccCCCCCCcc
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE-----AYNDNGLVPRTIWLLKDRY--PDLVIYTDVALDPYSSDGHD 230 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~-----A~n~~glV~rAIr~iK~~f--Pdl~VitDVcLc~YTshGHc 230 (327)
.+.+.++++.+.|+..|.|=+-+.+ +| +|-- ..-|-.-...-|+++++.. ++..|++=. |.+- .
T Consensus 91 ~~~~~v~~l~~aGa~gv~iED~~~~-k~--cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRt--da~~-a--- 161 (290)
T 2hjp_A 91 NVHYVVPQYEAAGASAIVMEDKTFP-KD--TSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARV--EALI-A--- 161 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECBCSS-CC--C-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE--CTTT-T---
T ss_pred HHHHHHHHHHHhCCeEEEEcCCCCC-cc--ccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee--hHhh-c---
Confidence 4888899999999999999554211 12 1111 1222223344567777763 666666522 1110 0
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC-CCC-chHHHHHHHHH
Q 020319 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD-MMD-GRVGAIRAALD 281 (327)
Q Consensus 231 GIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD-MMD-GRV~aIR~aLD 281 (327)
. ..++.+.+-|..|++||||+|=+-. +-| -.+..|.++|+
T Consensus 162 ----~-------~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 162 ----G-------LGQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWP 203 (290)
T ss_dssp ----T-------CCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC
T ss_pred ----c-------ccHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC
Confidence 0 1266777789999999999997766 766 67778887774
No 25
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=77.92 E-value=7.7 Score=38.49 Aligned_cols=91 Identities=15% Similarity=0.204 Sum_probs=63.0
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
..+.++.+.+.|+..|-+|....+ . --+..+|+.+|+.- +.|..++| |++. .
T Consensus 102 ~~~~v~~a~~~Gvd~i~if~~~sd-~------------~ni~~~i~~ak~~G--~~v~~~i~---~~~~----------~ 153 (464)
T 2nx9_A 102 VDTFVERAVKNGMDVFRVFDAMND-V------------RNMQQALQAVKKMG--AHAQGTLC---YTTS----------P 153 (464)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCC-T------------HHHHHHHHHHHHTT--CEEEEEEE---CCCC----------T
T ss_pred hHHHHHHHHhCCcCEEEEEEecCH-H------------HHHHHHHHHHHHCC--CEEEEEEE---eeeC----------C
Confidence 466788999999999999975332 1 13667899999873 55666664 3221 1
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--------hHHHHHHHH
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVVSPSDMMDG--------RVGAIRAAL 280 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDG--------RV~aIR~aL 280 (327)
.- +++.+.+.+-...++|||+|+-.||.=+ .|.++|+.+
T Consensus 154 ~~---~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 154 VH---NLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp TC---CHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC
T ss_pred CC---CHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc
Confidence 11 4667777777778999999999998753 456666655
No 26
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=76.71 E-value=11 Score=31.87 Aligned_cols=92 Identities=21% Similarity=0.220 Sum_probs=59.4
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
..+.++.+.++|+..|+++++-+ +..+ .|+-...++.+++.. ++-|++ +|-
T Consensus 156 ~~e~~~~~~~~G~d~i~~~~~~~----~g~~------~~~~~~~i~~l~~~~-~~pvia------------------~GG 206 (253)
T 1h5y_A 156 AVKWAKEVEELGAGEILLTSIDR----DGTG------LGYDVELIRRVADSV-RIPVIA------------------SGG 206 (253)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTT----TTTC------SCCCHHHHHHHHHHC-SSCEEE------------------ESC
T ss_pred HHHHHHHHHhCCCCEEEEecccC----CCCc------CcCCHHHHHHHHHhc-CCCEEE------------------eCC
Confidence 67888899999999999998622 2221 122356778888764 343333 255
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeec-CCCCCCc--hHHHHHHHHHHCCCC
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVVS-PSDMMDG--RVGAIRAALDAEGFQ 286 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiVA-PSDMMDG--RV~aIR~aLD~~Gf~ 286 (327)
|.+-+.+.. ..++|||.|. =|..+.+ -+..+++.|+++||.
T Consensus 207 i~~~~~~~~-------~~~~Ga~~v~vgsal~~~~~~~~~~~~~l~~~g~~ 250 (253)
T 1h5y_A 207 AGRVEHFYE-------AAAAGADAVLAASLFHFRVLSIAQVKRYLKERGVE 250 (253)
T ss_dssp CCSHHHHHH-------HHHTTCSEEEESHHHHTTSSCHHHHHHHHHHTTCB
T ss_pred CCCHHHHHH-------HHHcCCcHHHHHHHHHcCCCCHHHHHHHHHHcCCC
Confidence 665454443 2258999653 3444444 378999999999993
No 27
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=76.03 E-value=12 Score=35.31 Aligned_cols=77 Identities=22% Similarity=0.208 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHH
Q 020319 198 LVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIR 277 (327)
Q Consensus 198 lV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR 277 (327)
-+...|+++.++- +-|+..+-|-|=+.|--.|..- -|+ .| ..+.+.+.|..+.+||||+|=+-.+-.--..+|.
T Consensus 137 e~~~~I~al~~ag--IpV~gHiGLtPqsv~~~ggf~v-~gr--t~-~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~it 210 (281)
T 1oy0_A 137 RVAEQIACLTAAG--IPVMAHIGFTPQSVNTLGGFRV-QGR--GD-AAEQTIADAIAVAEAGAFAVVMEMVPAELATQIT 210 (281)
T ss_dssp GGHHHHHHHHHHT--CCEEEEEECCC-----------------CH-HHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHH
T ss_pred HHHHHHHHHHHCC--CCEEeeecCCcceecccCCeEE-EeC--cH-HHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHH
Confidence 3566788887763 4467666677765554444432 232 34 6689999999999999999977665544556666
Q ss_pred HHH
Q 020319 278 AAL 280 (327)
Q Consensus 278 ~aL 280 (327)
++|
T Consensus 211 ~~l 213 (281)
T 1oy0_A 211 GKL 213 (281)
T ss_dssp HHC
T ss_pred HhC
Confidence 666
No 28
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=76.02 E-value=6.7 Score=36.73 Aligned_cols=100 Identities=16% Similarity=0.155 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccC--cCCCCcHHHHHHHHHHHC--CCeeEEeeecccCCCCCCcceee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEA--YNDNGLVPRTIWLLKDRY--PDLVIYTDVALDPYSSDGHDGIV 233 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A--~n~~glV~rAIr~iK~~f--Pdl~VitDVcLc~YTshGHcGIl 233 (327)
.+.+-++++.+.|+..|.|=+-+.+ +|. |... .-+-.-...-|++++++- ++..|++
T Consensus 98 ~~~~~v~~l~~aGa~gv~iED~~~p-Krc--gh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~a---------------- 158 (287)
T 3b8i_A 98 NVMRTVVELERAGIAALTIEDTLLP-AQF--GRKSTDLICVEEGVGKIRAALEARVDPALTIIA---------------- 158 (287)
T ss_dssp HHHHHHHHHHHHTCSEEEEECBCCS-CCT--TTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEE----------------
T ss_pred HHHHHHHHHHHhCCeEEEEcCCCCc-ccc--CCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEE----------------
Confidence 4888899999999999999654322 232 2111 222223556677777763 4444443
Q ss_pred cCCCcccc-HHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHH
Q 020319 234 REDGVIMN-DETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAAL 280 (327)
Q Consensus 234 ~~~G~IdN-D~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aL 280 (327)
+.|. ...++.+.+-|..+++||||+|=+-.+-| -.+.+|.++|
T Consensus 159 ----Rtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~ 203 (287)
T 3b8i_A 159 ----RTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL 203 (287)
T ss_dssp ----EEETTTSCHHHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC
T ss_pred ----echhhhcCHHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC
Confidence 1111 11356777799999999999997776665 5566666655
No 29
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=75.66 E-value=5.5 Score=35.18 Aligned_cols=61 Identities=23% Similarity=0.214 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC-CchHHHHHHH
Q 020319 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM-DGRVGAIRAA 279 (327)
Q Consensus 201 rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMM-DGRV~aIR~a 279 (327)
..|+.||+.+|+.-|+.|+-| -|+..|+... .+++|||+|.=-... +..+.+.+++
T Consensus 47 ~~v~~l~~~~p~~~iflDlKl-----------------~Dip~t~~~~------~~~~Gad~vtVH~~~g~~~l~~a~~~ 103 (221)
T 3exr_A 47 ELVEVLRSLFPDKIIVADTKC-----------------ADAGGTVAKN------NAVRGADWMTCICSATIPTMKAARKA 103 (221)
T ss_dssp HHHHHHHHHCTTSEEEEEEEE-----------------CSCHHHHHHH------HHTTTCSEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEEe-----------------eccHHHHHHH------HHHcCCCEEEEeccCCHHHHHHHHHH
Confidence 579999999999889999876 1456666543 478888884432222 2335566666
Q ss_pred HHHCC
Q 020319 280 LDAEG 284 (327)
Q Consensus 280 LD~~G 284 (327)
+.+.|
T Consensus 104 ~~~~g 108 (221)
T 3exr_A 104 IEDIN 108 (221)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 65555
No 30
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=75.33 E-value=3.5 Score=40.14 Aligned_cols=125 Identities=19% Similarity=0.303 Sum_probs=83.9
Q ss_pred hhhHhhhccCCCCCCCceeeEEEeeCCC-----CcccCCCC--C---ceEecc--hhhHHHHHHHHHHcCCCeEEEeecC
Q 020319 113 PAMRASFQETNLSPANFVYPLFIHEGEE-----DTPIGAMP--G---CYRLGW--RHGLVQEVAKARDVGVNSVVLFPKV 180 (327)
Q Consensus 113 ~~lR~l~~Et~Ls~~dLI~PlFV~eg~~-----~~~I~SMP--G---v~r~si--d~~l~~ev~~~~~lGI~sVlLFgvi 180 (327)
.+||+.+.|.-+..+=.|+--=..--.. .+...|=| | -||+.. ..+.+.|++.-++-|-.-||+=|-
T Consensus 187 ~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPa- 265 (342)
T 1h7n_A 187 RDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPS- 265 (342)
T ss_dssp HHHHHHHHHTTCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESS-
T ss_pred HHHHHHHHHCCCccCceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEecC-
Confidence 3667666666664444555444332111 13334444 2 233321 125888888889999999998664
Q ss_pred CCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeec---CCCccccHHHHHHHHHHHHHHHH
Q 020319 181 PDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR---EDGVIMNDETVHQLCKQAVSQAR 257 (327)
Q Consensus 181 ~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~---~~G~IdND~Tv~~Lak~Als~A~ 257 (327)
.+.-.-||.+|++||++-|.+ |.-.|--..+. ++|-||-++. +.+.-++.-+
T Consensus 266 ----------------l~YLDIi~~vk~~~p~~P~aa------YqVSGEYAMikaAa~~GwiD~~~~---v~Esl~~~kR 320 (342)
T 1h7n_A 266 ----------------TFYLDIMRDASEICKDLPICA------YHVSGEYAMLHAAAEKGVVDLKTI---AFESHQGFLR 320 (342)
T ss_dssp ----------------GGGHHHHHHHHHHTTTSCEEE------EECHHHHHHHHHHHHTTSSCHHHH---HHHHHHHHHH
T ss_pred ----------------ccHHHHHHHHHHhccCCCeEE------EEcCcHHHHHHHHHHcCCccHHHH---HHHHHHHHHh
Confidence 334668999999999999888 99999888774 4788886643 3456788999
Q ss_pred cCCCee
Q 020319 258 AGADVV 263 (327)
Q Consensus 258 AGADiV 263 (327)
||||+|
T Consensus 321 AGAd~I 326 (342)
T 1h7n_A 321 AGARLI 326 (342)
T ss_dssp TTCSEE
T ss_pred cCCCEE
Confidence 999986
No 31
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=75.31 E-value=20 Score=34.45 Aligned_cols=46 Identities=22% Similarity=0.282 Sum_probs=32.8
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
..+.++.+++.|+..|.|.- . .| ++ ..+...|+.+|+++|++.|+.
T Consensus 109 ~~~~~~~lieaGvd~I~idt--a------~G----~~-~~~~~~I~~ik~~~p~v~Vi~ 154 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDS--S------HG----HS-EGVLQRIRETRAAYPHLEIIG 154 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEEC--S------CT----TS-HHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeC--C------CC----CC-HHHHHHHHHHHHhcCCCceEe
Confidence 57788899999999776631 1 11 11 135668999999999987765
No 32
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=75.07 E-value=4 Score=37.38 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHH----CCCeeEEeeecccCCCCCCcceeecC
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDR----YPDLVIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~----fPdl~VitDVcLc~YTshGHcGIl~~ 235 (327)
.+-++++.+.|+..|.|=+-. .. .|.+ .-+-.-...-|+++++. -+++.|++ |++..-
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~--~~---~~k~-l~~~~e~~~~I~a~~~a~~~~g~~~~v~a-----------Rtd~~~- 157 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVV--HS---EGKR-VREAQEHADYIAAARQAADVAGVDVVING-----------RTDAVK- 157 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEE--GG---GTTE-ECCHHHHHHHHHHHHHHHHHHTCCCEEEE-----------EECHHH-
T ss_pred HHHHHHHHHcCCcEEEECCCC--CC---CCCc-ccCHHHHHHHHHHHHHHHHhcCCCeEEEE-----------Eechhh-
Confidence 666778888999999884321 00 0111 11111356678888777 45555554 333211
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHH
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAAL 280 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aL 280 (327)
.|.-++.+.++.+.+-|..|++||||+|=+-.+-| --+..|.++|
T Consensus 158 ~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~ 203 (255)
T 2qiw_A 158 LGADVFEDPMVEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAV 203 (255)
T ss_dssp HCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC
T ss_pred ccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC
Confidence 12223346788999999999999999997766665 5566666555
No 33
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=74.43 E-value=8.8 Score=32.22 Aligned_cols=91 Identities=22% Similarity=0.264 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
+.++.++.+.+ |+..+-+ +. + . +-.+|+ ..|+.||+.+|++-|+.|.-+. .
T Consensus 14 ~~~~~~~~~~~-~v~~iev-~~-~-~---------~~~~g~--~~i~~l~~~~~~~~i~~~l~~~--d------------ 64 (207)
T 3ajx_A 14 AALELAGKVAE-YVDIIEL-GT-P-L---------IKAEGL--SVITAVKKAHPDKIVFADMKTM--D------------ 64 (207)
T ss_dssp HHHHHHHHHGG-GCSEEEE-CH-H-H---------HHHHCT--HHHHHHHHHSTTSEEEEEEEEC--S------------
T ss_pred HHHHHHHHhhc-cCCEEEE-Cc-H-H---------HHhhCH--HHHHHHHHhCCCCeEEEEEEec--C------------
Confidence 45666666666 7776555 21 1 0 112233 4799999999998888877541 0
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHHHCCCC
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALDAEGFQ 286 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD~~Gf~ 286 (327)
| -+| .+ -..+++|||.|.-....+ ..+..+++.+.+.|..
T Consensus 65 -i--~~~---~~---~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~ 105 (207)
T 3ajx_A 65 -A--GEL---EA---DIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKG 105 (207)
T ss_dssp -C--HHH---HH---HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE
T ss_pred -c--cHH---HH---HHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCc
Confidence 1 122 12 234567888775333233 5666777777666653
No 34
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=74.42 E-value=1.9 Score=39.00 Aligned_cols=45 Identities=33% Similarity=0.595 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCCeecC-----CCC-CCc--hHHHHHHHHHHCCCCCceeeehh
Q 020319 249 CKQAVSQARAGADVVSP-----SDM-MDG--RVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 249 ak~Als~A~AGADiVAP-----SDM-MDG--RV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
..||+.-|+|||+.||| .|. .|| .|..|++.++..|| ++-||+=|
T Consensus 113 ~~Qa~~Aa~AGa~yISPfvgRi~d~~~dG~~~v~~i~~~~~~~~~-~t~ilaAS 165 (212)
T 3r8r_A 113 ANQALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGL-DTQIIAAS 165 (212)
T ss_dssp HHHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTC-CCEEEEBS
T ss_pred HHHHHHHHHcCCeEEEeccchhhhcCCChHHHHHHHHHHHHHcCC-CCEEEEec
Confidence 34999999999999999 122 243 57889999999999 78888644
No 35
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=74.08 E-value=3.6 Score=39.89 Aligned_cols=80 Identities=20% Similarity=0.299 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeec---
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR--- 234 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~--- 234 (327)
+.+.|++.-++-|-.-||+=|- .+.-.-||.+|++||++-|.+ |.-.|--..+.
T Consensus 233 EAlre~~~Di~EGAD~vMVKPa-----------------l~YLDIi~~vk~~~p~~P~aa------YqVSGEYAMikaAa 289 (330)
T 1pv8_A 233 LALRAVDRDVREGADMLMVKPG-----------------MPYLDIVREVKDKHPDLPLAV------YHVSGEFAMLWHGA 289 (330)
T ss_dssp HHHHHHHHHHHTTCSBEEEESC-----------------GGGHHHHHHHHHHSTTSCEEE------EECHHHHHHHHHHH
T ss_pred HHHHHHHhhHHhCCceEEEecC-----------------ccHHHHHHHHHHhcCCCCeEE------EEcCcHHHHHHHHH
Confidence 5888888889999999998664 334668999999999999888 99999888774
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 235 EDGVIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 235 ~~G~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
++|-+|-++. +.+.-++.-+||||+|
T Consensus 290 ~~GwiD~~~~---v~Esl~~~kRAGAd~I 315 (330)
T 1pv8_A 290 QAGAFDLKAA---VLEAMTAFRRAGADII 315 (330)
T ss_dssp HTTSSCHHHH---HHHHHHHHHHHTCSEE
T ss_pred HcCCccHHHH---HHHHHHHHHhcCCCEE
Confidence 4788886643 3456788999999986
No 36
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=73.97 E-value=11 Score=35.14 Aligned_cols=93 Identities=18% Similarity=0.267 Sum_probs=60.4
Q ss_pred HHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCC
Q 020319 159 LVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSD 227 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi---------~--~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTsh 227 (327)
..+.++.+.+.|...|-|-+-= | +.-.|+.|..--|.--++.+.|+++|++. +.-|...+..+.|...
T Consensus 146 ~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~ 224 (338)
T 1z41_A 146 FKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDK 224 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTT
T ss_pred HHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCC
Confidence 5566667889999999986521 2 22345555433333345678899999998 8888888888776321
Q ss_pred CcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 020319 228 GHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 228 GHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS 266 (327)
| .+-++ ..+.|-...++|+|.|-=|
T Consensus 225 ---------g-~~~~~----~~~~a~~l~~~Gvd~i~v~ 249 (338)
T 1z41_A 225 ---------G-LDIAD----HIGFAKWMKEQGVDLIDCS 249 (338)
T ss_dssp ---------S-CCHHH----HHHHHHHHHHTTCCEEEEE
T ss_pred ---------C-CCHHH----HHHHHHHHHHcCCCEEEEe
Confidence 2 22222 3345556678999998744
No 37
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=73.95 E-value=17 Score=33.00 Aligned_cols=104 Identities=15% Similarity=0.073 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.... ||+ .-|
T Consensus 20 ~l~~lv~~li~~Gv~gl~v~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~g--vi~-----------------Gvg 72 (286)
T 2r91_A 20 LFANHVKNITSKGVDVVFVAGT--------TGLGPALSLQEKMELTDAATSAARR--VIV-----------------QVA 72 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEETST--------TTTGGGSCHHHHHHHHHHHHHHCSS--EEE-----------------ECC
T ss_pred HHHHHHHHHHHCCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCC--EEE-----------------eeC
Confidence 4778888999999999999985 3443332222345566777776555 333 113
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee---cCCC----CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVV---SPSD----MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiV---APSD----MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
...-.+|++ .+-..+++|||-| .|.= --+|-+...+...++. +++||=|-.
T Consensus 73 ~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~---~lPiilYn~ 130 (286)
T 2r91_A 73 SLNADEAIA----LAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAV---SIPVFLYNY 130 (286)
T ss_dssp CSSHHHHHH----HHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred CCCHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 333355554 4444577899965 4432 1277888888888876 568998863
No 38
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=73.04 E-value=8.2 Score=36.43 Aligned_cols=97 Identities=19% Similarity=0.266 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeec---------CC--CCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPK---------VP--DALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgv---------i~--~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YT 225 (327)
...+.++.+.+.|...|-|-+- -| +.-.|+.|..--|.--++.+.|+++|++.+ +..|..-+..++|.
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~ 238 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYD 238 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcC
Confidence 4566667788999999999752 12 223455554332222366778999999986 67788887776653
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 226 shGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
. +| +.|++...+.|-.+.++|+|.|--|.
T Consensus 239 ~---------~G----~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 239 G---------RD----EQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp S---------CH----HHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred C---------CC----CCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 2 12 14556666677778899999987553
No 39
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=72.54 E-value=43 Score=28.27 Aligned_cols=49 Identities=12% Similarity=0.193 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeee
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDV 219 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDV 219 (327)
.++++.+.+.|...|.+-.. .. .+|+..+.+.++.+|+.+|++.|+.|+
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~---~~--------~~p~~~~~~~i~~~~~~~~~~~v~~~~ 126 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDAT---LQ--------QRPKETLDELVSYIRTHAPNVEIMADI 126 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECS---CS--------CCSSSCHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHhCCCCEEEEeee---cc--------cCcccCHHHHHHHHHHhCCCceEEecC
Confidence 56788899999988766432 11 123334678999999999998887664
No 40
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=72.22 E-value=11 Score=35.29 Aligned_cols=101 Identities=19% Similarity=0.252 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.+++-+.++.+.|..+|-|=+- . .....|+.|.+. .+=|+.-+-|-|-+.|--.|..- .|
T Consensus 107 ~a~~~a~rl~kaGa~aVklEdg----------~-------~~~~~i~~l~~~--GIpv~gHlgltPq~~~~~gg~~v-qg 166 (275)
T 3vav_A 107 DAFASAVKLMRAGAQMVKFEGG----------E-------WLAETVRFLVER--AVPVCAHVGLTPQSVHAFGGFKV-QG 166 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC----------G-------GGHHHHHHHHHT--TCCEEEEEESCGGGHHHHC---C-CC
T ss_pred HHHHHHHHHHHcCCCEEEECCc----------h-------hHHHHHHHHHHC--CCCEEEecCCCceEEeccCCeEE-Ec
Confidence 4666666666666666665221 0 234566666654 23333322233322221111111 12
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHH
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAAL 280 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aL 280 (327)
..|+..+.+.+.|..+.+||||+|=+-.+-+--...|.++|
T Consensus 167 --rt~~~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~It~~l 207 (275)
T 3vav_A 167 --KTEAGAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTREL 207 (275)
T ss_dssp --CSHHHHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHHHC
T ss_pred --CCHHHHHHHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHhC
Confidence 35778899999999999999999988777665666676666
No 41
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=72.16 E-value=11 Score=36.28 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
...+.++.+++.|+..|.+-- +. |. . -.+.+.|+.||+.+|++.|+.
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~--a~------G~----~-~~~~e~I~~ir~~~~~~~Vi~ 146 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDV--AH------AH----A-KYVGKTLKSLRQLLGSRCIMA 146 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC--SC------CS----S-HHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeC--CC------CC----c-HhHHHHHHHHHHhcCCCeEEE
Confidence 467889999999999555521 11 11 1 135678999999999988887
No 42
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=71.87 E-value=19 Score=34.47 Aligned_cols=121 Identities=17% Similarity=0.222 Sum_probs=68.7
Q ss_pred eeEEEeeCCCCcccCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecCCC---CCCCccc--ccCcCCCCc---HHHH
Q 020319 131 YPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPD---ALKSPTG--DEAYNDNGL---VPRT 202 (327)
Q Consensus 131 ~PlFV~eg~~~~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~---~~KD~~G--s~A~n~~gl---V~rA 202 (327)
.||+|.=. |+. +. +++.+.++.+.+.|+..|.+.+.... ..+...+ ...+...-+ --+.
T Consensus 221 ~Pv~vKi~---------p~~---~~-~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~ 287 (367)
T 3zwt_A 221 PAVLVKIA---------PDL---TS-QDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQT 287 (367)
T ss_dssp CEEEEEEC---------SCC---CH-HHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHH
T ss_pred ceEEEEeC---------CCC---CH-HHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHH
Confidence 69998743 221 22 25788888899999999999875321 0111111 111111111 2367
Q ss_pred HHHHHHHCC-CeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--CC--chH----
Q 020319 203 IWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--MD--GRV---- 273 (327)
Q Consensus 203 Ir~iK~~fP-dl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDM--MD--GRV---- 273 (327)
|+.||+.++ ++-||. .|-|.+-+ .|..+-++|||.|.=.-- .+ +-+
T Consensus 288 v~~i~~~v~~~ipvI~------------------~GGI~s~~-------da~~~l~~GAd~V~vgra~l~~gP~~~~~i~ 342 (367)
T 3zwt_A 288 IREMYALTQGRVPIIG------------------VGGVSSGQ-------DALEKIRAGASLVQLYTALTFWGPPVVGKVK 342 (367)
T ss_dssp HHHHHHHTTTCSCEEE------------------ESSCCSHH-------HHHHHHHHTCSEEEESHHHHHHCTHHHHHHH
T ss_pred HHHHHHHcCCCceEEE------------------ECCCCCHH-------HHHHHHHcCCCEEEECHHHHhcCcHHHHHHH
Confidence 888899986 566664 35566543 344445579998863221 12 123
Q ss_pred HHHHHHHHHCCCCCce
Q 020319 274 GAIRAALDAEGFQHVS 289 (327)
Q Consensus 274 ~aIR~aLD~~Gf~~v~ 289 (327)
..+++.|++.||.++.
T Consensus 343 ~~l~~~m~~~G~~~i~ 358 (367)
T 3zwt_A 343 RELEALLKEQGFGGVT 358 (367)
T ss_dssp HHHHHHHHHTTCSSHH
T ss_pred HHHHHHHHHcCCCCHH
Confidence 3455667778987653
No 43
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=71.53 E-value=23 Score=34.99 Aligned_cols=47 Identities=23% Similarity=0.314 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
+..+.++.+++.|+..|.|-.- . | ....+...|+.||+++|++.|+.
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a---~-----g-----~~~~~~~~i~~ir~~~p~~~Vi~ 277 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSS---H-----G-----HSEGVLQRIRETRAAYPHLEIIG 277 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECS---C-----T-----TSHHHHHHHHHHHHHCTTCCEEE
T ss_pred chHHHHHHHHhccCceEEeccc---c-----c-----cchHHHHHHHHHHHHCCCceEEE
Confidence 3578899999999997766432 1 1 11245689999999999977765
No 44
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=70.92 E-value=26 Score=33.07 Aligned_cols=102 Identities=16% Similarity=0.083 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHH---HHHHHHH----CCCeeEEeeecccCCCCCCcc
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRT---IWLLKDR----YPDLVIYTDVALDPYSSDGHD 230 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rA---Ir~iK~~----fPdl~VitDVcLc~YTshGHc 230 (327)
.+.+.++++.+.|+..|.|=+.+.+ +| +|...-.+==++..+ |++.++. -||++|++=+- .|..+
T Consensus 96 ~v~~tv~~l~~aGaagv~iEDq~~~-Kr--cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTD--a~~~~--- 167 (302)
T 3fa4_A 96 MVARTTEQYSRSGVAAFHIEDQVQT-KR--CGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTD--SLQTH--- 167 (302)
T ss_dssp HHHHHHHHHHHTTCCEEEECSBCCC----------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEEC--CHHHH---
T ss_pred HHHHHHHHHHHcCCcEEEECCCCCC-cc--cCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEec--ccccC---
Confidence 3778888999999999998655332 22 222111111123333 3444432 58988886321 12110
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc-hHHHHHHHH
Q 020319 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDG-RVGAIRAAL 280 (327)
Q Consensus 231 GIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDG-RV~aIR~aL 280 (327)
.-|++++ -+..|++||||+|=+-.+-|- .+.+|.+++
T Consensus 168 ---------gldeAi~----Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~ 205 (302)
T 3fa4_A 168 ---------GYEESVA----RLRAARDAGADVGFLEGITSREMARQVIQDL 205 (302)
T ss_dssp ---------CHHHHHH----HHHHHHTTTCSEEEETTCCCHHHHHHHHHHT
T ss_pred ---------CHHHHHH----HHHHHHHcCCCEEeecCCCCHHHHHHHHHHh
Confidence 1355555 677899999999988776552 455555555
No 45
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=70.53 E-value=20 Score=32.28 Aligned_cols=55 Identities=15% Similarity=0.181 Sum_probs=37.5
Q ss_pred CceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEE
Q 020319 149 GCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIY 216 (327)
Q Consensus 149 Gv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vi 216 (327)
.-|+++.+ +++++++++.+.|++.|.|.|--++ .++ ..-+.+.++.||+. ++.|-
T Consensus 80 ~~~~ls~e-ei~~~i~~~~~~g~~~i~~~gGe~p---------~~~-~~~~~~li~~i~~~--~~~i~ 134 (348)
T 3iix_A 80 KRYRMTPE-EIVERARLAVQFGAKTIVLQSGEDP---------YXM-PDVISDIVKEIKKM--GVAVT 134 (348)
T ss_dssp CCCBCCHH-HHHHHHHHHHHTTCSEEEEEESCCG---------GGT-THHHHHHHHHHHTT--SCEEE
T ss_pred CceeCCHH-HHHHHHHHHHHCCCCEEEEEeCCCC---------Ccc-HHHHHHHHHHHHhc--CceEE
Confidence 34567886 7999999999999999988763111 111 13467788888876 44444
No 46
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=69.42 E-value=12 Score=34.28 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=61.4
Q ss_pred HHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-----------
Q 020319 202 TIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM----------- 268 (327)
Q Consensus 202 AIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDM----------- 268 (327)
..|.|++..|+ ++-+.|.+-.||- .-.-++-.+.+.+.+-.+.++|||+|.=..-
T Consensus 20 v~~~i~~~lP~~~~iy~~D~a~~PYG------------~ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa~~~al~~lr 87 (269)
T 3ist_A 20 VVREVLKQLPHEQVYYLGDTARCPYG------------PRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIR 87 (269)
T ss_dssp HHHHHHHHCTTCCEEEEECGGGCCCT------------TSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCcEEEEeCCCCCCCC------------CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHH
Confidence 57888899995 8888999999993 2233333344445555566788887732110
Q ss_pred ------CCchHH-HHHHHHHHCCCCCceeeehhhhhhccccc
Q 020319 269 ------MDGRVG-AIRAALDAEGFQHVSIMSYTAKYASSFYG 303 (327)
Q Consensus 269 ------MDGRV~-aIR~aLD~~Gf~~v~IMSYSAKyASsfYG 303 (327)
+=|.|. +++.++...+..+|+||+=.+--.|.+|-
T Consensus 88 ~~~~iPvigii~pa~~~A~~~~~~~~IGVLaT~~Ti~s~~y~ 129 (269)
T 3ist_A 88 EKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYP 129 (269)
T ss_dssp HHCSSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHHH
T ss_pred HhcCCCEEeecHHHHHHHHHHcCCCeEEEEeccchhhHHHHH
Confidence 115343 77778877788899999887777887874
No 47
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=69.17 E-value=16 Score=36.19 Aligned_cols=67 Identities=22% Similarity=0.347 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe-eecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT-DVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit-DVcLc~YTshGHcGIl~~~ 236 (327)
+..+.++.+++.|+..|.|... . | +. .-+...|+.||++||++.|+. +
T Consensus 256 d~~era~aLveaGvd~I~Id~a--~------g----~~-~~v~~~i~~i~~~~~~~~vi~g~------------------ 304 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTA--H------G----HS-QGVIDKVKEVRAKYPSLNIIAGN------------------ 304 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECS--C------T----TS-HHHHHHHHHHHHHCTTSEEEEEE------------------
T ss_pred chHHHHHHHHhhccceEEeccc--c------c----ch-hhhhhHHHHHHHhCCCceEEeee------------------
Confidence 4788899999999998888642 0 1 11 125679999999999876663 2
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCeec
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVVS 264 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiVA 264 (327)
|. |. +.|...+++|||.|-
T Consensus 305 --v~---t~----e~a~~~~~aGad~i~ 323 (511)
T 3usb_A 305 --VA---TA----EATKALIEAGANVVK 323 (511)
T ss_dssp --EC---SH----HHHHHHHHHTCSEEE
T ss_pred --ec---cH----HHHHHHHHhCCCEEE
Confidence 11 22 246667789999884
No 48
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=68.22 E-value=14 Score=30.94 Aligned_cols=51 Identities=12% Similarity=-0.054 Sum_probs=34.1
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecc
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVAL 221 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcL 221 (327)
+.+ ++.+.++.+.+.|+..|-+--.. + -..+.|+.+|+.+| ++.|..+.+.
T Consensus 20 ~~~-~~~~~~~~~~~~G~~~iev~~~~--------------~--~~~~~i~~ir~~~~~~~~ig~~~v~ 71 (205)
T 1wa3_A 20 SVE-EAKEKALAVFEGGVHLIEITFTV--------------P--DADTVIKELSFLKEKGAIIGAGTVT 71 (205)
T ss_dssp SHH-HHHHHHHHHHHTTCCEEEEETTS--------------T--THHHHHHHTHHHHHTTCEEEEESCC
T ss_pred CHH-HHHHHHHHHHHCCCCEEEEeCCC--------------h--hHHHHHHHHHHHCCCCcEEEecccC
Confidence 444 57888888999999987542110 0 12467999999987 6777665543
No 49
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=67.47 E-value=11 Score=35.36 Aligned_cols=94 Identities=16% Similarity=0.318 Sum_probs=60.9
Q ss_pred HHHHHHHHHHcCCCeEEEeec---------CC--CCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCC
Q 020319 159 LVQEVAKARDVGVNSVVLFPK---------VP--DALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSD 227 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgv---------i~--~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTsh 227 (327)
..+-++.+.+.|...|-|-+- -| +.-.|+.|-.--|.--++.+.|+++|++. +.-|..-+..+.|..
T Consensus 146 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~- 223 (340)
T 3gr7_A 146 FQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHP- 223 (340)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCST-
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccC-
Confidence 455556678899999999743 12 23356666543333346778899999998 777777666655532
Q ss_pred CcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 228 GHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 228 GHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
+| .+.+++ .+.|-.+.++|+|.|--|+
T Consensus 224 --------~g-~~~~~~----~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 224 --------DG-LTAKDY----VPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp --------TS-CCGGGH----HHHHHHHHHTTCCEEEEEC
T ss_pred --------CC-CCHHHH----HHHHHHHHHcCCCEEEEec
Confidence 12 223333 3466667899999998764
No 50
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=67.28 E-value=3.7 Score=32.56 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=24.2
Q ss_pred CCCCchHHHHHHHHHHCCCCCceeeehh-hhhhccccc
Q 020319 267 DMMDGRVGAIRAALDAEGFQHVSIMSYT-AKYASSFYG 303 (327)
Q Consensus 267 DMMDGRV~aIR~aLD~~Gf~~v~IMSYS-AKyASsfYG 303 (327)
.||+ |+..+|+.|.++|..-+-|.+-. -.|-|.|.|
T Consensus 1 ~~m~-Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~ 37 (140)
T 3i7m_A 1 GHMT-KLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGS 37 (140)
T ss_dssp ---C-HHHHHHHHHHHTTCSEEEECCHHHHHHHHCCCC
T ss_pred Ccch-HHHHHHHHHHHcCCCEEEECCCCcceeecCCCC
Confidence 4788 99999999999999655555432 346666654
No 51
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=67.13 E-value=21 Score=33.38 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=58.1
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCcc
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVI 239 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~I 239 (327)
.+.++.+.+.|+..|.+|--+. +. -...+.++.+|+. .+.++..++ |.++
T Consensus 96 ~~~i~~a~~aGvd~v~I~~~~s----~~---------~~~~~~i~~ak~~--G~~v~~~~~-~a~~-------------- 145 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVATHCT----EA---------DVSKQHIEYARNL--GMDTVGFLM-MSHM-------------- 145 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEEETT----CG---------GGGHHHHHHHHHH--TCEEEEEEE-STTS--------------
T ss_pred HHHHHHHHhCCcCEEEEEEecc----HH---------HHHHHHHHHHHHC--CCEEEEEEE-eCCC--------------
Confidence 4678888999999999984221 11 1357788888887 355555543 2221
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--------hHHHHHHHH
Q 020319 240 MNDETVHQLCKQAVSQARAGADVVSPSDMMDG--------RVGAIRAAL 280 (327)
Q Consensus 240 dND~Tv~~Lak~Als~A~AGADiVAPSDMMDG--------RV~aIR~aL 280 (327)
.+.+.+.+++-...++|||+|+-.||.=. .|.++|+.+
T Consensus 146 ---~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 146 ---IPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp ---SCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHS
T ss_pred ---CCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhc
Confidence 13466777777777889999999987542 355666655
No 52
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=66.74 E-value=22 Score=32.68 Aligned_cols=106 Identities=14% Similarity=0.157 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~Gt--------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv----------------- 88 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGT--------TGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT----------------- 88 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC-----------------
Confidence 4778888999999999999985 34433222222334455444443 345555421
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .+-..+++|||-| .|.= --+|-+...|+..++. +++||=|-.
T Consensus 89 g~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn~ 146 (301)
T 1xky_A 89 GSNNTHASID----LTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST---PLPVMLYNV 146 (301)
T ss_dssp CCSCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC---SSCEEEEEC
T ss_pred CCCCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2223355554 4444477899964 4431 1278888888887765 579998863
No 53
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=66.32 E-value=25 Score=32.42 Aligned_cols=51 Identities=18% Similarity=0.266 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHH------------------HHHHHHHHCCC--eeEEe
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPR------------------TIWLLKDRYPD--LVIYT 217 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~r------------------AIr~iK~~fPd--l~Vit 217 (327)
..++.++.+.+.|..-|-| |+ |- -|+.. ||++.| .++.+|+++++ +++++
T Consensus 35 ~~~~~~~~l~~~GaD~iEl-Gi-Pf--SDP~a------DGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~ 104 (271)
T 3nav_A 35 QSLAIMQTLIDAGADALEL-GM-PF--SDPLA------DGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLM 104 (271)
T ss_dssp HHHHHHHHHHHTTCSSEEE-EC-CC--CCGGG------CCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE-CC-CC--CCCCC------CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 4677888888999877655 53 42 45543 577776 57888888765 55565
Q ss_pred e
Q 020319 218 D 218 (327)
Q Consensus 218 D 218 (327)
.
T Consensus 105 Y 105 (271)
T 3nav_A 105 Y 105 (271)
T ss_dssp C
T ss_pred c
Confidence 3
No 54
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=65.78 E-value=12 Score=36.30 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=45.1
Q ss_pred HHHHHHHHHHCCC---eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHc--CCCeecCCCCCC----
Q 020319 200 PRTIWLLKDRYPD---LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARA--GADVVSPSDMMD---- 270 (327)
Q Consensus 200 ~rAIr~iK~~fPd---l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~A--GADiVAPSDMMD---- 270 (327)
..|++..++.||+ +.+-+ |.|.+ -.+.|+..|++ |+|+|=.-.|-.
T Consensus 197 ~~A~~~~~~~~p~~~~~~vlv----DT~d~---------------------~~~~al~~a~~l~~~d~IrlDs~~~~~gd 251 (398)
T 2i1o_A 197 EEAWKLTLENTKNGQKSVLLI----DTYMD---------------------EKFAAIKIAEMFDKVDYIRLDTPSSRRGN 251 (398)
T ss_dssp HHHHHHHHHTCCTTSCCEEEC----CSSSC---------------------HHHHHHHHHTTCSCCCEEEECCCGGGCSC
T ss_pred HHHHHHHHHhCCCCCCEEEEE----cCchH---------------------HHHHHHHHHHhhcCCcEEEeCCCCCCccc
Confidence 7899999999996 23333 23311 12356666677 999997766632
Q ss_pred --chHHHHHHHHHHCCCCCceee
Q 020319 271 --GRVGAIRAALDAEGFQHVSIM 291 (327)
Q Consensus 271 --GRV~aIR~aLD~~Gf~~v~IM 291 (327)
=-|..+|+.||+.||.++-|.
T Consensus 252 ~~~~v~~v~~~ld~~G~~~~~I~ 274 (398)
T 2i1o_A 252 FEALIREVRWELALRGRSDIKIM 274 (398)
T ss_dssp HHHHHHHHHHHHHHTTCTTSEEE
T ss_pred HHHHHHHHHHHHHhCCCCceEEE
Confidence 346668999999999777554
No 55
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=65.32 E-value=33 Score=31.19 Aligned_cols=111 Identities=18% Similarity=0.256 Sum_probs=66.9
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcce
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDG 231 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcG 231 (327)
+-.+ .+.+.++.+++.|+..+.+.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 18 iD~~-~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv------------ 76 (289)
T 2yxg_A 18 VDFD-GLEENINFLIENGVSGIVAVGT--------TGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA------------ 76 (289)
T ss_dssp ECHH-HHHHHHHHHHHTTCSEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC------------
T ss_pred cCHH-HHHHHHHHHHHCCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC------------
Confidence 3443 4788888999999999999995 34433222222344555555443 245565521
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhhh
Q 020319 232 IVREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTAK 296 (327)
Q Consensus 232 Il~~~G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSAK 296 (327)
|...-.++++ .+-..+++|||-| .|.= --+|-+...|+..++. +++||=|-.-
T Consensus 77 -----g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~---~lPiilYn~P 135 (289)
T 2yxg_A 77 -----GSNCTEEAIE----LSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI---NLPIVLYNVP 135 (289)
T ss_dssp -----CCSSHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEECH
T ss_pred -----CCCCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeCc
Confidence 2223345544 4444467899964 4432 1278888888888876 5699988643
No 56
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=65.13 E-value=56 Score=29.72 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=24.5
Q ss_pred HHHHHHcCCCeecCCCCCC-----------------chHHHHHHHHHHCCCC
Q 020319 252 AVSQARAGADVVSPSDMMD-----------------GRVGAIRAALDAEGFQ 286 (327)
Q Consensus 252 Als~A~AGADiVAPSDMMD-----------------GRV~aIR~aLD~~Gf~ 286 (327)
+..--.+||+.+.|.=|=+ -.+..+++.+.++||+
T Consensus 286 ~~~~l~~Gan~~~~~~~~~~~~ag~~~~~~~~~~~~~~~~~~~~~i~~~G~~ 337 (350)
T 3t7v_A 286 MVLRLNAGANIVTSILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEIMGMK 337 (350)
T ss_dssp HHHHHHTTCCEEEEECCSSCCCCCSSCTTTTCSSCCCCHHHHHHHHHHHTCE
T ss_pred HHHHHhcCCceecCCCCCCCCCCCCCCCcccchhccCCHHHHHHHHHHcCCc
Confidence 3344579999998763323 1568888888888884
No 57
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=64.55 E-value=27 Score=32.68 Aligned_cols=58 Identities=24% Similarity=0.299 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
.+++.++.+.+.|+..|.+.+.... . --.|.......+.--..|+.||+.+|++-||+
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~-~-g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVia 202 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSAL-L-ALSTKANREIPPLRHDWVHRLKGDFPQLTFVT 202 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC------------CCCCCHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCchh-c-ccCcccccCCCcccHHHHHHHHHhCCCCeEEE
Confidence 4788889999999999999875211 0 00111100001223467999999998877776
No 58
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=64.09 E-value=29 Score=31.66 Aligned_cols=110 Identities=16% Similarity=0.208 Sum_probs=65.8
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcce
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDG 231 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcG 231 (327)
+-.+ .+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 18 iD~~-~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------ 76 (294)
T 2ehh_A 18 VDYE-ALGNLIEFHVDNGTDAILVCGT--------TGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT------------ 76 (294)
T ss_dssp ECHH-HHHHHHHHHHTTTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC------------
T ss_pred cCHH-HHHHHHHHHHHCCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec------------
Confidence 3443 4778888999999999999985 34333222222334455544443 245555511
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 232 IVREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 232 Il~~~G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-.++++ .+-..+++|||-| .|.= --+|-+...+...++. +++||=|-.
T Consensus 77 -----g~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn~ 134 (294)
T 2ehh_A 77 -----GGNATHEAVH----LTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV---DIPIIIYNI 134 (294)
T ss_dssp -----CCSCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEEC
T ss_pred -----CCCCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2223345554 4444467899965 4431 1278888888888776 568998863
No 59
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=63.55 E-value=25 Score=34.64 Aligned_cols=68 Identities=29% Similarity=0.377 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
+..+.++.+++.|+..|.|-- . .| + ...+.+.|+.+|+++|++.|+. |
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~--a------~g----~-~~~~~~~v~~i~~~~p~~~Vi~-------------g------ 276 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDT--A------HG----H-SKGVIERVRWVKQTFPDVQVIG-------------G------ 276 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEEC--S------CC----S-BHHHHHHHHHHHHHCTTSEEEE-------------E------
T ss_pred chHHHHHHHhhcccceEEecc--c------CC----c-chhHHHHHHHHHHHCCCceEEE-------------e------
Confidence 468899999999998665531 1 11 1 2356689999999999976665 1
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeec
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVS 264 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVA 264 (327)
.+.+ . +.|....+||||.|-
T Consensus 277 ~v~t---~----e~a~~l~~aGaD~I~ 296 (490)
T 4avf_A 277 NIAT---A----EAAKALAEAGADAVK 296 (490)
T ss_dssp EECS---H----HHHHHHHHTTCSEEE
T ss_pred eeCc---H----HHHHHHHHcCCCEEE
Confidence 1111 1 256777889999985
No 60
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=63.36 E-value=20 Score=32.38 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=67.2
Q ss_pred eeEEEeeCCCCcccCCCCCceEecchhhHHHHHHHHHHcC-CCeEEEeecC------CCCCCCc------ccccCcCCCC
Q 020319 131 YPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVG-VNSVVLFPKV------PDALKSP------TGDEAYNDNG 197 (327)
Q Consensus 131 ~PlFV~eg~~~~~I~SMPGv~r~sid~~l~~ev~~~~~lG-I~sVlLFgvi------~~~~KD~------~Gs~A~n~~g 197 (327)
.||+|.-..+ ++.+ ++.+.++.+.+.| +..|.+.+.. +. .+.. .+...+....
T Consensus 161 ~Pv~vK~~~~------------~~~~-~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~-~~~~~~~~~~~~~gG~sg~~ 226 (314)
T 2e6f_A 161 LPFGVKMPPY------------FDIA-HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDA-ESESVVIKPKQGFGGLGGKY 226 (314)
T ss_dssp SCEEEEECCC------------CCHH-HHHHHHHHHHTCTTEEEEEECCCEEEEECEET-TTTEESCCGGGGEEEEESGG
T ss_pred CCEEEEECCC------------CCHH-HHHHHHHHHHhcCCceEEEEeCCCCccccccC-CCCCcccccCcCCCccCccc
Confidence 5898875322 1333 4677788899999 9999987632 10 0000 0000111000
Q ss_pred ---cHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC--------
Q 020319 198 ---LVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS-------- 266 (327)
Q Consensus 198 ---lV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS-------- 266 (327)
..-+.|+.+|+.+|++-||+ .|-|.+-+.+. ..-++|||.|.=.
T Consensus 227 ~~p~~~~~i~~v~~~~~~ipvi~------------------~GGI~~~~da~-------~~l~~GAd~V~ig~~~l~~~p 281 (314)
T 2e6f_A 227 ILPTALANVNAFYRRCPDKLVFG------------------CGGVYSGEDAF-------LHILAGASMVQVGTALQEEGP 281 (314)
T ss_dssp GHHHHHHHHHHHHHHCTTSEEEE------------------ESSCCSHHHHH-------HHHHHTCSSEEECHHHHHHCT
T ss_pred ccHHHHHHHHHHHHhcCCCCEEE------------------ECCCCCHHHHH-------HHHHcCCCEEEEchhhHhcCc
Confidence 12378888888887777765 36666555443 2235799988311
Q ss_pred CCCCchHHHHHHHHHHCCCCCc
Q 020319 267 DMMDGRVGAIRAALDAEGFQHV 288 (327)
Q Consensus 267 DMMDGRV~aIR~aLD~~Gf~~v 288 (327)
+...--...+++.|+..||.++
T Consensus 282 ~~~~~i~~~l~~~~~~~g~~~i 303 (314)
T 2e6f_A 282 GIFTRLEDELLEIMARKGYRTL 303 (314)
T ss_dssp THHHHHHHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHHHHHHHHcCCCCH
Confidence 1222223346677888898765
No 61
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=63.12 E-value=14 Score=38.83 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=63.3
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
..+.++.+.+.|+..|-+|.-.. +=--+.++|+.+|+.- +.|..++| ||.+ + +|..
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~s~n-------------~l~~l~~~i~~ak~~G--~~v~~~i~---~~~d-----~-~dp~ 254 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFDSLN-------------YLPNMLLGMEAAGSAG--GVVEAAIS---YTGD-----V-ADPS 254 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSC-------------CHHHHHHHHHHHHTTT--SEEEEEEE---CCSC-----T-TCTT
T ss_pred hHHHHHHHHhcCcCEEEEEecHH-------------HHHHHHHHHHHHHHcC--CeEEEEEE---eecc-----c-cCCC
Confidence 46788999999999999996321 1114667777777653 55555555 4420 0 1110
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------chHHHHHHHH
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------GRVGAIRAAL 280 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD--------GRV~aIR~aL 280 (327)
...-+++.+.+++-...++|||+|+-.||.= -.|.++|+.+
T Consensus 255 -r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~ 303 (718)
T 3bg3_A 255 -RTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRF 303 (718)
T ss_dssp -CCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHS
T ss_pred -CCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhC
Confidence 0112466777777777899999999999875 3577777776
No 62
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=63.10 E-value=29 Score=31.85 Aligned_cols=111 Identities=16% Similarity=0.215 Sum_probs=68.2
Q ss_pred EecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC--CeeEEeeecccCCCCCCc
Q 020319 152 RLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP--DLVIYTDVALDPYSSDGH 229 (327)
Q Consensus 152 r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP--dl~VitDVcLc~YTshGH 229 (327)
++-.+ .+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+... .+-||+=|
T Consensus 24 ~iD~~-~l~~lv~~li~~Gv~gl~v~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------- 84 (301)
T 3m5v_A 24 KVDEQ-SYARLIKRQIENGIDAVVPVGT--------TGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------- 84 (301)
T ss_dssp EECHH-HHHHHHHHHHHTTCCEEECSST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC----------
T ss_pred CCCHH-HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC----------
Confidence 33443 5788888999999999999985 344333222233445565555543 35565522
Q ss_pred ceeecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 230 DGIVREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 230 cGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-+++++ .+-..+++|||-| .|.= --+|-+...|+..+.. +++||=|-.
T Consensus 85 -------g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn~ 142 (301)
T 3m5v_A 85 -------GSNATHEAVG----LAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSV---DIPVLLYNV 142 (301)
T ss_dssp -------CCSSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred -------CCCCHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEeC
Confidence 2223345544 4445567899964 3321 1278899999988887 679998853
No 63
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=62.72 E-value=23 Score=32.27 Aligned_cols=103 Identities=12% Similarity=0.045 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.... ++-.-|
T Consensus 21 ~l~~lv~~li~~Gv~gl~v~Gt--------TGE~~~Ls~eEr~~v~~~~~~~~~g-------------------ViaGvg 73 (288)
T 2nuw_A 21 ALKTHAKNLLEKGIDAIFVNGT--------TGLGPALSKDEKRQNLNALYDVTHK-------------------LIFQVG 73 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEETST--------TTTGGGSCHHHHHHHHHHHTTTCSC-------------------EEEECC
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCC-------------------eEEeeC
Confidence 4778888999999999999985 3443332222233444544444333 222123
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee---cCCCC----CCchHHHHHHHHHHCCCCCceeeehh
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVV---SPSDM----MDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiV---APSDM----MDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
...-.+|++ .+-..+++|||-| .|.=- -+|-+...++..++. +++||=|-
T Consensus 74 ~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~---~lPiilYn 130 (288)
T 2nuw_A 74 SLNLNDVME----LVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARIS---SHSLYIYN 130 (288)
T ss_dssp CSCHHHHHH----HHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred CCCHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc---CCCEEEEE
Confidence 223345544 4444577899964 45422 267888888888876 56898885
No 64
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=62.15 E-value=24 Score=32.50 Aligned_cols=111 Identities=14% Similarity=0.205 Sum_probs=65.6
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcce
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDG 231 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcG 231 (327)
+-++ .+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 30 iD~~-~l~~lv~~li~~Gv~gl~v~Gt--------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv------------ 88 (306)
T 1o5k_A 30 LDLE-SYERLVRYQLENGVNALIVLGT--------TGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA------------ 88 (306)
T ss_dssp ECHH-HHHHHHHHHHHTTCCEEEESSG--------GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC------------
T ss_pred cCHH-HHHHHHHHHHHcCCCEEEeCcc--------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC------------
Confidence 3443 4778888999999999999985 34443322222344455554443 245455421
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhhh
Q 020319 232 IVREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTAK 296 (327)
Q Consensus 232 Il~~~G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSAK 296 (327)
|...-.+|++ .+-..+++|||-| .|.= --+|-+...|...++. +++||=|-.-
T Consensus 89 -----g~~st~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn~P 147 (306)
T 1o5k_A 89 -----GTNSTEKTLK----LVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT---DLGIVVYNVP 147 (306)
T ss_dssp -----CCSCHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC---SSCEEEEECH
T ss_pred -----CCccHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEeCc
Confidence 2223345544 4444467899964 4431 1277788888777654 6799988643
No 65
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=62.10 E-value=19 Score=36.59 Aligned_cols=91 Identities=20% Similarity=0.214 Sum_probs=62.1
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
..+.++.+.+.|+.-|-+|....+ . --+..+|+.+|+.- +.|-.-+| |++ +.
T Consensus 119 ~~~~ve~a~~aGvd~vrIf~s~sd-~------------~ni~~~i~~ak~~G--~~v~~~i~---~~~----------~~ 170 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVFDAMND-P------------RNMAHAMAAVKKAG--KHAQGTIC---YTI----------SP 170 (539)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCC-T------------HHHHHHHHHHHHTT--CEEEEEEE---CCC----------ST
T ss_pred cHHHHHHHHhCCCCEEEEEEehhH-H------------HHHHHHHHHHHHCC--CeEEEEEE---eee----------CC
Confidence 567788999999999999975332 1 12578899998874 33322232 221 11
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------chHHHHHHHH
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------GRVGAIRAAL 280 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD--------GRV~aIR~aL 280 (327)
.- +++.+.+.+-...++|||+|+-.||.= -.|.++|+.+
T Consensus 171 ~~---~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 171 VH---TVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp TC---CHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhc
Confidence 11 566777777777889999999999875 3577788877
No 66
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=61.24 E-value=33 Score=31.57 Aligned_cols=107 Identities=18% Similarity=0.254 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv----------------- 87 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGS--------TGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV----------------- 87 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECee--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-----------------
Confidence 4778888999999999999995 34333222222334455555443 356666521
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-.+|++ .+-..+++|||-| .|.= --||-+...|...++.+ +++||=|-.
T Consensus 88 g~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~--~lPiilYn~ 146 (303)
T 2wkj_A 88 GCVSTAESQQ----LAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSAD--GLPMVVYNI 146 (303)
T ss_dssp CCSSHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHT--TCCEEEEEC
T ss_pred CCCCHHHHHH----HHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCC--CCCEEEEeC
Confidence 2222345544 4444467899964 4431 23788888888887764 378988863
No 67
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=61.24 E-value=25 Score=32.11 Aligned_cols=104 Identities=12% Similarity=0.026 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.... ||+ .-|
T Consensus 21 ~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~eEr~~v~~~~~~~~~g--via-----------------Gvg 73 (293)
T 1w3i_A 21 KLKIHAENLIRKGIDKLFVNGT--------TGLGPSLSPEEKLENLKAVYDVTNK--IIF-----------------QVG 73 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHTTCSC--EEE-----------------ECC
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHcCC--EEE-----------------ecC
Confidence 4778888999999999999985 3443332222234556666655444 332 113
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee---cCCCC----CCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVV---SPSDM----MDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiV---APSDM----MDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
...-++|++ .+-..+++|||-| .|.=- -+|-+...+...++. +++||=|-.
T Consensus 74 ~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~---~lPiilYn~ 131 (293)
T 1w3i_A 74 GLNLDDAIR----LAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVS---PHPVYLYNY 131 (293)
T ss_dssp CSCHHHHHH----HHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred CCCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhC---CCCEEEEEC
Confidence 233355554 4444467899965 45422 267888888888776 568998863
No 68
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=60.96 E-value=34 Score=31.26 Aligned_cols=95 Identities=19% Similarity=0.161 Sum_probs=54.0
Q ss_pred eeEEEeeCCCCcccCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCC----CC-----cHHH
Q 020319 131 YPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYND----NG-----LVPR 201 (327)
Q Consensus 131 ~PlFV~eg~~~~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~----~g-----lV~r 201 (327)
+||+|.-.. + ++.+ ++.+.++.+.+.|+..|.+.+.... ..+.......++ .| ...+
T Consensus 212 ~Pv~vKi~~---------~---~~~~-~~~~~a~~l~~~Gvd~i~vsn~~~~-~~~~~~~~~~~~~gg~~g~~~~~~~~~ 277 (336)
T 1f76_A 212 VPIAVKIAP---------D---LSEE-ELIQVADSLVRHNIDGVIATNTTLD-RSLVQGMKNCDQTGGLSGRPLQLKSTE 277 (336)
T ss_dssp CCEEEECCS---------C---CCHH-HHHHHHHHHHHTTCSEEEECCCBCC-CTTSTTSTTTTCSSEEEEGGGHHHHHH
T ss_pred CceEEEecC---------C---CCHH-HHHHHHHHHHHcCCcEEEEeCCccc-ccccccccccccCCCcCCchhHHHHHH
Confidence 599987421 1 3443 5788888999999999999864211 111110000111 12 1236
Q ss_pred HHHHHHHHCC-CeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeec
Q 020319 202 TIWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVS 264 (327)
Q Consensus 202 AIr~iK~~fP-dl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVA 264 (327)
.++.+|+..+ ++-||+ .|-|.+-+.++ .+ -++|||.|.
T Consensus 278 ~i~~i~~~~~~~ipVi~------------------~GGI~~~~da~----~~---l~~GAd~V~ 316 (336)
T 1f76_A 278 IIRRLSLELNGRLPIIG------------------VGGIDSVIAAR----EK---IAAGASLVQ 316 (336)
T ss_dssp HHHHHHHHHTTSSCEEE------------------ESSCCSHHHHH----HH---HHHTCSEEE
T ss_pred HHHHHHHHhCCCCCEEE------------------ECCCCCHHHHH----HH---HHCCCCEEE
Confidence 7788888775 565555 25666555444 22 246999884
No 69
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=60.87 E-value=16 Score=34.00 Aligned_cols=107 Identities=23% Similarity=0.251 Sum_probs=66.0
Q ss_pred ceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCc
Q 020319 150 CYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGH 229 (327)
Q Consensus 150 v~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGH 229 (327)
=|. +.. ..++-+.++.+.|..+|-|=+ | .-+...|+++.++- +-|+.=+-|-|=+.|--
T Consensus 89 sy~-~~~-~a~~~a~rl~kaGa~aVklEg----------g-------~e~~~~I~al~~ag--ipV~gHiGLtPq~v~~~ 147 (264)
T 1m3u_A 89 AYA-TPE-QAFENAATVMRAGANMVKIEG----------G-------EWLVETVQMLTERA--VPVCGHLGLTPQSVNIF 147 (264)
T ss_dssp SSS-SHH-HHHHHHHHHHHTTCSEEECCC----------S-------GGGHHHHHHHHHTT--CCEEEEEESCGGGHHHH
T ss_pred CcC-CHH-HHHHHHHHHHHcCCCEEEECC----------c-------HHHHHHHHHHHHCC--CCeEeeecCCceeeccc
Confidence 344 554 577777888888888876622 1 13566788887763 33444333333222222
Q ss_pred ceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHH
Q 020319 230 DGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAAL 280 (327)
Q Consensus 230 cGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aL 280 (327)
.|..- -| ..|+..+.+.+.|..+.+||||+|=+-.+-.--..+|.++|
T Consensus 148 ggf~v-~g--rt~~~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~it~~l 195 (264)
T 1m3u_A 148 GGYKV-QG--RGDEAGDQLLSDALALEAAGAQLLVLECVPVELAKRITEAL 195 (264)
T ss_dssp TSSCC-CC--CSHHHHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHC
T ss_pred CCeEE-Ee--CCHHHHHHHHHHHHHHHHCCCcEEEEecCCHHHHHHHHHhC
Confidence 22211 12 35677899999999999999999977665544455666665
No 70
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=60.59 E-value=63 Score=30.52 Aligned_cols=47 Identities=19% Similarity=0.312 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
+..+.++.+.+.|+..|.|-. . . | ++ ..+.+.|+.+|+.+|++-|+.
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~--~--~----g----~~-~~~~e~i~~ir~~~~~~pviv 199 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDS--A--H----G----HS-TRIIELIKKIKTKYPNLDLIA 199 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECC--S--C----C----SS-HHHHHHHHHHHHHCTTCEEEE
T ss_pred hHHHHHHHHHHCCCCEEEEeC--C--C----C----Ch-HHHHHHHHHHHHHCCCCeEEE
Confidence 357778889999999887721 1 1 1 22 356678899999998876664
No 71
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=60.54 E-value=43 Score=30.79 Aligned_cols=106 Identities=23% Similarity=0.226 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 38 ~l~~lv~~li~~Gv~gl~v~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv----------------- 92 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDSLVLAGT--------TGESPTTTAAEKLELLKAVREEVGDRAKLIAGV----------------- 92 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEESST--------TTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC-----------------
Confidence 4778888999999999999995 33333211112234445444443 235555411
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-.++++ .+-..+++|||-| .|.= --+|-+...++..+.. +++||=|-.
T Consensus 93 g~~st~~ai~----la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~---~lPiilYn~ 150 (304)
T 3cpr_A 93 GTNNTRTSVE----LAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT---EVPICLYDI 150 (304)
T ss_dssp CCSCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEEC
T ss_pred CCCCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2223355554 3444467899954 4431 1378888888888776 569998864
No 72
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=60.35 E-value=63 Score=31.90 Aligned_cols=120 Identities=15% Similarity=0.209 Sum_probs=76.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCc------------HHHHHHHHHHHCCCeeEEeeecccCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDPYS 225 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~gl------------V~rAIr~iK~~fPdl~VitDVcLc~YT 225 (327)
++.+.+..+.++|+++|-|-|+.+-. ......|++-+. +.+.|++++++ .|-||.|+-+....
T Consensus 120 ~~~~~l~~l~~lG~~~v~l~Pi~~~~---~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~--Gi~VilD~V~NH~~ 194 (558)
T 3vgf_A 120 GVIRKLDYLKDLGITAIEIMPIAQFP---GKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKK--GLGVILDVVYNHVG 194 (558)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEECS---SSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHT--TCEEEEEECCSCCC
T ss_pred HHHHHHHHHHHcCCcEEEECCcccCC---CCCCcCcccccccccccccCCHHHHHHHHHHHHHc--CCEEEEEEeecccc
Confidence 68888999999999999998862211 112223444332 45566666665 79999999886544
Q ss_pred CCCc----------------ce-eecCCCccccHHHHHHHHHHHHHHH-HcCCCee---cCCCCCC----chHHHHHHHH
Q 020319 226 SDGH----------------DG-IVREDGVIMNDETVHQLCKQAVSQA-RAGADVV---SPSDMMD----GRVGAIRAAL 280 (327)
Q Consensus 226 shGH----------------cG-Il~~~G~IdND~Tv~~Lak~Als~A-~AGADiV---APSDMMD----GRV~aIR~aL 280 (327)
..++ +| .++-++ -.|++..+.|.+.+.-.. +.|+|-+ ++..|.| --+..|++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~g~~~n~~~-~~~~~v~~~l~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~~~~ 273 (558)
T 3vgf_A 195 PEGNYMVKLGPYFSQKYKTPWGLTFNFDD-AESDEVRKFILENVEYWIKEYNVDGFRLSAVHAIIDTSPKHILEEIADVV 273 (558)
T ss_dssp SSSCCGGGTSCCEEEEEEETTEEEECSSS-TTHHHHHHHHHHHHHHHHHHHCCCEEEESCGGGCCCCSSSCHHHHHHHHH
T ss_pred CCCCcccccCCccCCCCCCCCCCcccCCC-CCCHHHHHHHHHHHHHHHHHhCCCEEEEecccccccccHHHHHHHHHHHH
Confidence 3221 11 111111 125677788888888888 5799866 4555544 3578888888
Q ss_pred HHC
Q 020319 281 DAE 283 (327)
Q Consensus 281 D~~ 283 (327)
++.
T Consensus 274 ~~~ 276 (558)
T 3vgf_A 274 HKY 276 (558)
T ss_dssp HHT
T ss_pred hhc
Confidence 875
No 73
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=60.34 E-value=29 Score=32.48 Aligned_cols=106 Identities=21% Similarity=0.202 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+... .+-||+=|
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv----------------- 110 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGS--------TGIYMYLTREERRRAIEAAATILRGRRTLMAGI----------------- 110 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-----------------
Confidence 4778888999999999999995 344333222223445555555443 45566522
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-+++++ .+-..+++|||-| .|.= --+|-+...|...++. +++||=|-.
T Consensus 111 g~~st~eai~----la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~---~lPiilYn~ 168 (332)
T 2r8w_A 111 GALRTDEAVA----LAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGAT---ALPLAIYNN 168 (332)
T ss_dssp CCSSHHHHHH----HHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC---SSCEEEECC
T ss_pred CCCCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2222345554 4444467899964 4431 1278888888888876 578998863
No 74
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=59.81 E-value=25 Score=33.51 Aligned_cols=98 Identities=11% Similarity=0.022 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeec-----------CCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPK-----------VPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgv-----------i~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YT 225 (327)
+..+.++.+.+.|...|-|-+- ..+.-.|+.|-.--|.--++.+.|+++|++.+ + .|...+....+-
T Consensus 167 ~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrls~~~~~ 245 (377)
T 2r14_A 167 DYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRLTPFLEL 245 (377)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEecccccc
Confidence 4566666778999999999542 11223455554332333356777999999987 5 677777664432
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 226 shGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
...|+ | .+++...+.|-...++|+|.|.=|.
T Consensus 246 ~~~~~------~-----~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 246 FGLTD------D-----EPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp TTCCC------S-----CHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCC------C-----CCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 11111 1 2344455566677889999887654
No 75
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=59.76 E-value=5.9 Score=35.91 Aligned_cols=101 Identities=17% Similarity=0.124 Sum_probs=65.0
Q ss_pred eEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcc
Q 020319 151 YRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHD 230 (327)
Q Consensus 151 ~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHc 230 (327)
.|...+ .+++.++.+.+.|+..|.|. |..|. ..| ..+.+-++.|++++|++ +..-|||+
T Consensus 150 ~~~~~~-~~~~~~~~~~~~G~d~i~l~--------Dt~G~--~~P-~~~~~lv~~l~~~~~~~---------~l~~H~Hn 208 (295)
T 1ydn_A 150 GPVTPQ-AVASVTEQLFSLGCHEVSLG--------DTIGR--GTP-DTVAAMLDAVLAIAPAH---------SLAGHYHD 208 (295)
T ss_dssp EECCHH-HHHHHHHHHHHHTCSEEEEE--------ETTSC--CCH-HHHHHHHHHHHTTSCGG---------GEEEEEBC
T ss_pred CCCCHH-HHHHHHHHHHhcCCCEEEec--------CCCCC--cCH-HHHHHHHHHHHHhCCCC---------eEEEEECC
Confidence 677875 69999999999999998876 33444 233 24667788899888742 34568898
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC-------CCCCch-----HHHHHHHHHHCCC
Q 020319 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS-------DMMDGR-----VGAIRAALDAEGF 285 (327)
Q Consensus 231 GIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS-------DMMDGR-----V~aIR~aLD~~Gf 285 (327)
+. | .-.+ .++.-.+|||+.|==| -+..|| ...+=..|...|+
T Consensus 209 ~~----G--la~a-------n~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~~g~ 262 (295)
T 1ydn_A 209 TG----G--RALD-------NIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEMGF 262 (295)
T ss_dssp TT----S--CHHH-------HHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHHTTC
T ss_pred Cc----c--hHHH-------HHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHhcCC
Confidence 42 3 1111 2344558999996433 233445 4445556777777
No 76
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=59.67 E-value=36 Score=33.41 Aligned_cols=46 Identities=15% Similarity=0.237 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCC-eeEE
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD-LVIY 216 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPd-l~Vi 216 (327)
...+.++.+++.|++.+.+.-. + | +..+ +...|+.||+.+|+ +.|+
T Consensus 242 ~~~e~~~~l~e~gv~~l~Vd~~---~-----g----~~~~-~~~~i~~lk~~~~~~~~Vi 288 (503)
T 1me8_A 242 DFRERVPALVEAGADVLCIDSS---D-----G----FSEW-QKITIGWIREKYGDKVKVG 288 (503)
T ss_dssp SHHHHHHHHHHHTCSEEEECCS---C-----C----CSHH-HHHHHHHHHHHHGGGSCEE
T ss_pred hHHHHHHHHHhhhccceEEecc---c-----C----cccc-hhhHHHHHHHhCCCCceEe
Confidence 4677788888899987555321 1 1 1122 66788999999887 6554
No 77
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=59.58 E-value=29 Score=31.78 Aligned_cols=110 Identities=20% Similarity=0.204 Sum_probs=65.4
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCCCCCcce
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDG 231 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YTshGHcG 231 (327)
+-.+ .+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+... .+-||+=|
T Consensus 18 iD~~-~l~~lv~~li~~Gv~gi~v~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------ 76 (297)
T 2rfg_A 18 VDEK-ALAGLVDWQIKHGAHGLVPVGT--------TGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA------------ 76 (297)
T ss_dssp ECHH-HHHHHHHHHHHTTCSEEECSSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC------------
T ss_pred cCHH-HHHHHHHHHHHcCCCEEEECcc--------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc------------
Confidence 3443 4778888999999999999885 344433222223344555444432 34444411
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 232 IVREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 232 Il~~~G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-.+|++ .|-..+++|||-| .|.= --+|-+...+...++. +++||=|-.
T Consensus 77 -----g~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn~ 134 (297)
T 2rfg_A 77 -----GSNNPVEAVR----YAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAI---DIPIIVYNI 134 (297)
T ss_dssp -----CCSSHHHHHH----HHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred -----CCCCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2223345554 4444467899965 3421 1278888888888876 569998863
No 78
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=59.20 E-value=31 Score=32.49 Aligned_cols=106 Identities=15% Similarity=0.173 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv----------------- 107 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGS--------GGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT----------------- 107 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEeCcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-----------------
Confidence 4778888999999999999995 33333221112234445444443 345555421
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .+-..+++|||-| .|.= --+|-+...+...++. +++||=|-.
T Consensus 108 g~~st~eai~----la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~---~lPiilYn~ 165 (343)
T 2v9d_A 108 GGTNARETIE----LSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSV---TLPVMLYNF 165 (343)
T ss_dssp CSSCHHHHHH----HHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTC---SSCEEEEEC
T ss_pred CCCCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2223355554 4444467899964 4431 1278888888887765 579998864
No 79
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=59.17 E-value=41 Score=32.07 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=69.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC-----------CCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKV-----------PDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi-----------~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTs 226 (327)
+..+-++.+.+.|...|-|-+-= .+.-.|+.|-.--|.--++.+.|+++|++.++-.|..-+....+
T Consensus 162 ~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~-- 239 (361)
T 3gka_A 162 AFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGD-- 239 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCC--
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccc--
Confidence 35556667889999999996531 23345666654445555788899999999863256655554332
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--hHHHHHHHH
Q 020319 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDG--RVGAIRAAL 280 (327)
Q Consensus 227 hGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDG--RV~aIR~aL 280 (327)
. .|+- ...+++...+.|-.+.++|+|.|.=|.-+.| .+..||+++
T Consensus 240 ~--~g~~-------~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~ 286 (361)
T 3gka_A 240 A--HTMG-------DSDPAATFGHVARELGRRRIAFLFARESFGGDAIGQQLKAAF 286 (361)
T ss_dssp S--SSCC-------CSCHHHHHHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHHHH
T ss_pred c--CCCC-------CCCcHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHc
Confidence 1 1221 1123444455666678899999875543322 467777775
No 80
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=58.80 E-value=74 Score=29.62 Aligned_cols=104 Identities=24% Similarity=0.221 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCccccc-----CcCCCCcHHHHHHHHHHHC--CCeeEEeeecccCCCCCCcc
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE-----AYNDNGLVPRTIWLLKDRY--PDLVIYTDVALDPYSSDGHD 230 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~-----A~n~~glV~rAIr~iK~~f--Pdl~VitDVcLc~YTshGHc 230 (327)
.+.+-++++.+.|+..|.|=+-... +| +|-- ..-|-.-...-|+++++.. ++.+|++=. |.+. .|
T Consensus 95 ~v~~~v~~l~~aGaagv~iED~~~~-k~--cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRt--da~~-a~-- 166 (295)
T 1s2w_A 95 NARRLVRKLEDRGVAGACLEDKLFP-KT--NSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARV--EAFI-AG-- 166 (295)
T ss_dssp HHHHHHHHHHHTTCCEEEEECBCC-----------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEE--CTTT-TT--
T ss_pred HHHHHHHHHHHcCCcEEEECCCCCC-cc--ccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee--hHHh-cc--
Confidence 4788889999999999998554211 11 2211 1222223344566666664 666666522 1110 00
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC-CCC-chHHHHHHHHH
Q 020319 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD-MMD-GRVGAIRAALD 281 (327)
Q Consensus 231 GIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD-MMD-GRV~aIR~aLD 281 (327)
..++.+.+-|..+++||||+|=+-. +-| -.+..|.++|+
T Consensus 167 ------------~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 167 ------------WGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWN 207 (295)
T ss_dssp ------------CCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHT
T ss_pred ------------ccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcC
Confidence 1267777789999999999997754 443 56777888875
No 81
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=57.32 E-value=15 Score=33.99 Aligned_cols=91 Identities=12% Similarity=0.177 Sum_probs=52.2
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCC-CCCcccccCcCCCC---cHHHHHHHHHHHCCCeeEEeeecc---cCCCCCCccee
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDA-LKSPTGDEAYNDNG---LVPRTIWLLKDRYPDLVIYTDVAL---DPYSSDGHDGI 232 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~-~KD~~Gs~A~n~~g---lV~rAIr~iK~~fPdl~VitDVcL---c~YTshGHcGI 232 (327)
.+.++.+++.|++.|-+|....+. .+-..+. +.+. .+.++|+.+|+.- +-|...++. |||
T Consensus 84 ~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~---s~~e~l~~~~~~v~~ak~~G--~~v~~~i~~~~~~~~-------- 150 (307)
T 1ydo_A 84 QRGLENALEGGINEACVFMSASETHNRKNINK---STSESLHILKQVNNDAQKAN--LTTRAYLSTVFGCPY-------- 150 (307)
T ss_dssp HHHHHHHHHHTCSEEEEEEESSHHHHHTTTCS---CHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTT--------
T ss_pred HHhHHHHHhCCcCEEEEEeecCHHHHHHHhCC---CHHHHHHHHHHHHHHHHHCC--CEEEEEEEEEecCCc--------
Confidence 345788888999999999754321 0111110 1111 2445666667663 444444443 444
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC
Q 020319 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD 270 (327)
Q Consensus 233 l~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD 270 (327)
+|..+ .+.+.+.+-...++|||.|.-.|+.=
T Consensus 151 ---~~~~~----~~~~~~~~~~~~~~Ga~~i~l~DT~G 181 (307)
T 1ydo_A 151 ---EKDVP----IEQVIRLSEALFEFGISELSLGDTIG 181 (307)
T ss_dssp ---TBCCC----HHHHHHHHHHHHHHTCSCEEEECSSC
T ss_pred ---CCCCC----HHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 23333 34555555666788999999998754
No 82
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=57.02 E-value=43 Score=29.46 Aligned_cols=19 Identities=11% Similarity=0.181 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHcCCCeEEE
Q 020319 158 GLVQEVAKARDVGVNSVVL 176 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlL 176 (327)
.+++.++.+.+.|+..|-|
T Consensus 33 ~~~~~~~~l~~~Gad~iel 51 (262)
T 1rd5_A 33 TTAEALRLLDGCGADVIEL 51 (262)
T ss_dssp HHHHHHHHHHHTTCSSEEE
T ss_pred HHHHHHHHHHHcCCCEEEE
Confidence 5788999999999999877
No 83
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=56.77 E-value=43 Score=31.92 Aligned_cols=111 Identities=10% Similarity=0.070 Sum_probs=68.0
Q ss_pred HHHHHHHHHHcCCCeEEEeecC-----------CCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCC
Q 020319 159 LVQEVAKARDVGVNSVVLFPKV-----------PDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSD 227 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi-----------~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTsh 227 (327)
..+-++.+.+.|...|-|-+-= .+.-.|+.|-.--|.--++.+.|+++|++.++-.|..-+....+.
T Consensus 155 f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~-- 232 (362)
T 4ab4_A 155 YRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADA-- 232 (362)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCS--
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccc--
Confidence 4455567889999999996531 233456656443444447778899999998642566666544331
Q ss_pred CcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--hHHHHHHHH
Q 020319 228 GHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDG--RVGAIRAAL 280 (327)
Q Consensus 228 GHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDG--RV~aIR~aL 280 (327)
.|+- ...+++...+.|-.+.++|+|.|.=|.-+.| .+..||+++
T Consensus 233 --~g~~-------~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~ 278 (362)
T 4ab4_A 233 --HDMG-------DADRAETFTYVARELGKRGIAFICSREREADDSIGPLIKEAF 278 (362)
T ss_dssp --SSCC-------CTTHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHHH
T ss_pred --cccC-------CCCcHHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHC
Confidence 1111 1123445555666778899999875543322 467777776
No 84
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=56.55 E-value=23 Score=34.81 Aligned_cols=106 Identities=11% Similarity=0.193 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcc----cccCcCCCC---cHHHHHHHHHHHCC-CeeEEeeecccCCCCCCc
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPT----GDEAYNDNG---LVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGH 229 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~----Gs~A~n~~g---lV~rAIr~iK~~fP-dl~VitDVcLc~YTshGH 229 (327)
++.+.++.+.+.|+..|+++..... .-|-. ....+.-.- .--+.|+.+++..+ ++-||.
T Consensus 284 ~i~~iA~~a~~aGaDgIiv~Ntt~~-r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg------------ 350 (415)
T 3i65_A 284 QKKEIADVLLETNIDGMIISNTTTQ-INDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIA------------ 350 (415)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCBSC-CCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE------------
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCcc-cccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEE------------
Confidence 4788888899999999999985322 11110 011111111 12367778888875 566654
Q ss_pred ceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC--CCCc--hH----HHHHHHHHHCCCCCce
Q 020319 230 DGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD--MMDG--RV----GAIRAALDAEGFQHVS 289 (327)
Q Consensus 230 cGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD--MMDG--RV----~aIR~aLD~~Gf~~v~ 289 (327)
.|-|.+-+ .|+..-++|||.|.=-- +.+| -+ ..|++.|++.||.++.
T Consensus 351 ------~GGI~s~e-------Da~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~~~l~~~G~~si~ 405 (415)
T 3i65_A 351 ------SGGIFSGL-------DALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLK 405 (415)
T ss_dssp ------CSSCCSHH-------HHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHTTCSSST
T ss_pred ------ECCCCCHH-------HHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 35566544 34444568999875211 1122 23 3456667788997654
No 85
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=56.55 E-value=42 Score=31.08 Aligned_cols=106 Identities=21% Similarity=0.227 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv----------------- 99 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGT--------TGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT----------------- 99 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSG--------GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-----------------
Confidence 5788888899999999999985 34433222222234444444433 345555511
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .+-..+++|||-| .|.= --+|-+...++..|.. +++||=|-.
T Consensus 100 g~~st~eai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn~ 157 (314)
T 3qze_A 100 GANSTREAVA----LTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV---AIPQILYNV 157 (314)
T ss_dssp CCSSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS---CSCEEEEEC
T ss_pred CCcCHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2223355554 4444567899954 3421 1278899999998887 679998853
No 86
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=56.33 E-value=28 Score=31.08 Aligned_cols=93 Identities=19% Similarity=0.253 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCC--eeEEeeecccCCCCCCcceeecC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~ 235 (327)
..+.|+++++++|-..|-+--.+. ..|+ .....+.+-|+.+++...+ |=||-..|+
T Consensus 72 ~k~~e~~~Ai~~GAdevd~vinig-~~~~-------g~~~~v~~ei~~v~~a~~~~~lkvIlet~~-------------- 129 (220)
T 1ub3_A 72 VKALEAALACARGADEVDMVLHLG-RAKA-------GDLDYLEAEVRAVREAVPQAVLKVILETGY-------------- 129 (220)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCHH-HHHT-------TCHHHHHHHHHHHHHHSTTSEEEEECCGGG--------------
T ss_pred HHHHHHHHHHHcCCCEEEecccch-hhhC-------CCHHHHHHHHHHHHHHHcCCCceEEEecCC--------------
Confidence 578999999999999997743222 1221 1225577888888888643 344444443
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCC-CCCc-----hHHHHHHH
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSD-MMDG-----RVGAIRAA 279 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD-MMDG-----RV~aIR~a 279 (327)
. +|+-+...++.| +++|||+|=-|- ---| -|..+|+.
T Consensus 130 ---l-~~e~i~~a~~ia---~eaGADfVKTsTGf~~~gat~~dv~~m~~~ 172 (220)
T 1ub3_A 130 ---F-SPEEIARLAEAA---IRGGADFLKTSTGFGPRGASLEDVALLVRV 172 (220)
T ss_dssp ---S-CHHHHHHHHHHH---HHHTCSEEECCCSSSSCCCCHHHHHHHHHH
T ss_pred ---C-CHHHHHHHHHHH---HHhCCCEEEeCCCCCCCCCCHHHHHHHHHh
Confidence 2 355555555554 589999998874 3324 45555554
No 87
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=56.26 E-value=74 Score=29.97 Aligned_cols=154 Identities=16% Similarity=0.128 Sum_probs=85.4
Q ss_pred CCcCCCChhhHhhhccCC-CCC-CCceeeEEEeeC---C--CCccc---CCCCCceEecchhhHHHHHHHHHHcCCCeEE
Q 020319 106 PRRNRKSPAMRASFQETN-LSP-ANFVYPLFIHEG---E--EDTPI---GAMPGCYRLGWRHGLVQEVAKARDVGVNSVV 175 (327)
Q Consensus 106 ~RRlR~~~~lR~l~~Et~-Ls~-~dLI~PlFV~eg---~--~~~~I---~SMPGv~r~sid~~l~~ev~~~~~lGI~sVl 175 (327)
+.-.-....+++|.+|.. ... .=.|+|-||..- . ....| -..|.=. .... .-+.|++++++.|-..|-
T Consensus 67 L~p~~T~~dI~~lc~eA~~~g~aaVCV~P~~V~~a~~~L~~s~V~V~tVigFP~G~-~~~~-~Kv~Ea~~Ai~~GAdEID 144 (288)
T 3oa3_A 67 LSLSATGSQIDVLCAEAKEYGFATVCVRPDYVSRAVQYLQGTQVGVTCVIGFHEGT-YSTD-QKVSEAKRAMQNGASELD 144 (288)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTCSEEEECGGGHHHHHHHTTTSSCEEEEEESTTTSC-SCHH-HHHHHHHHHHHTTCSEEE
T ss_pred CCCCCCHHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHcCCCCCeEEEEeCCCCCC-CcHH-HHHHHHHHHHHcCCCEEE
Confidence 333445566788877732 111 224566665421 1 11222 2334311 1222 468899999999999988
Q ss_pred EeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHH
Q 020319 176 LFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAV 253 (327)
Q Consensus 176 LFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Al 253 (327)
+--.+. ..|+ .....+.+-|+.+++...+ |-||- +.+.+ +|+-+...++.
T Consensus 145 mVINig-~lk~-------g~~~~v~~eI~~V~~a~~~~~lKVIl-----------------Et~~L-t~eei~~A~~i-- 196 (288)
T 3oa3_A 145 MVMNYP-WLSE-------KRYTDVFQDIRAVRLAAKDAILKVIL-----------------ETSQL-TADEIIAGCVL-- 196 (288)
T ss_dssp EECCHH-HHHT-------TCHHHHHHHHHHHHHHTTTSEEEEEC-----------------CGGGC-CHHHHHHHHHH--
T ss_pred EEeehh-hhcC-------CcHHHHHHHHHHHHHHhcCCCceEEE-----------------ECCCC-CHHHHHHHHHH--
Confidence 743222 1232 1224678889999988544 33333 33433 34445544444
Q ss_pred HHHHcCCCeecCCCC--CCc----hHHHHHHHHHHCCCCCceee
Q 020319 254 SQARAGADVVSPSDM--MDG----RVGAIRAALDAEGFQHVSIM 291 (327)
Q Consensus 254 s~A~AGADiVAPSDM--MDG----RV~aIR~aLD~~Gf~~v~IM 291 (327)
-++||||+|=-|-= --| -|.-+|+..+..|- ++.|-
T Consensus 197 -a~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~-~v~VK 238 (288)
T 3oa3_A 197 -SSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQS-ETRVK 238 (288)
T ss_dssp -HHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSS-CCEEE
T ss_pred -HHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCC-CceEE
Confidence 45899999988831 113 67888888865442 45553
No 88
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=56.03 E-value=45 Score=30.32 Aligned_cols=106 Identities=17% Similarity=0.215 Sum_probs=65.1
Q ss_pred hHHHHHHHHHH-cCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecC
Q 020319 158 GLVQEVAKARD-VGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 158 ~l~~ev~~~~~-lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~ 235 (327)
.+.+.++.+++ .|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------------- 80 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGS--------TGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---------------- 80 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC----------------
T ss_pred HHHHHHHHHHhhCCCcEEEeCcc--------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec----------------
Confidence 47788888999 99999999985 34433322222344555555443 345566522
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-+++++ .+-..+++|||-| .|.= --+|-+...|...++.+ ++||=|-.
T Consensus 81 -g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~---lPiilYn~ 138 (293)
T 1f6k_A 81 -GSVNLKEAVE----LGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG---SNMIVYSI 138 (293)
T ss_dssp -CCSCHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC---CCEEEEEC
T ss_pred -CCCCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC---CCEEEEEC
Confidence 2223355554 4444467899965 3421 14788888888888764 58888863
No 89
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=55.90 E-value=49 Score=30.25 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv----------------- 83 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGT--------TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT----------------- 83 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEeCcc--------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC-----------------
Confidence 5788888999999999999995 23333222222334455544443 345555511
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
|...-++|++ .+-..+++|||-| .|.= --||-+...|+..+.. +++||=|-
T Consensus 84 g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~---~lPiilYn 140 (297)
T 3flu_A 84 GANNTVEAIA----LSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT---SIPMIIYN 140 (297)
T ss_dssp CCSSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred CCcCHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEE
Confidence 2223345554 4445567899954 4431 1378888998888876 57999885
No 90
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=55.84 E-value=12 Score=34.86 Aligned_cols=57 Identities=12% Similarity=0.126 Sum_probs=45.8
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
++.+ ++.+++.++.+.|-.-|=|... |+.|....|+ ....+++..||++.||++|-.
T Consensus 27 vTpe-Eia~~A~~~~~AGAaivHlHvR------d~~G~~s~d~-~~~~e~~~~IR~~~pd~ii~~ 83 (275)
T 3no5_A 27 ITVS-EQVESTQAAFEAGATLVHLHVR------NDDETPTSNP-DRFALVLEGIRKHAPGMITQV 83 (275)
T ss_dssp CSHH-HHHHHHHHHHHHTCCEEEECEE------CTTSCEECCH-HHHHHHHHHHHHHSTTCEEEE
T ss_pred CCHH-HHHHHHHHHHHccCcEEEEeec------CCCCCcCCCH-HHHHHHHHHHHHhCCCeEEEe
Confidence 4565 7999999999999988888654 4457777765 578899999999999988753
No 91
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=55.59 E-value=20 Score=32.35 Aligned_cols=120 Identities=12% Similarity=0.133 Sum_probs=65.1
Q ss_pred eeEEEeeCCCCcccCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecC------CCCCCCcc-----cccCcCCCCc-
Q 020319 131 YPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKV------PDALKSPT-----GDEAYNDNGL- 198 (327)
Q Consensus 131 ~PlFV~eg~~~~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi------~~~~KD~~-----Gs~A~n~~gl- 198 (327)
.||+|.-.. + ++.+ ++.+.++.+.+.|+..|.+.+.. +...+... +...+.....
T Consensus 159 ~Pv~vKi~~---------~---~~~~-~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~ 225 (311)
T 1jub_A 159 KPLGVKLPP---------Y---FDLV-HFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIK 225 (311)
T ss_dssp SCEEEEECC---------C---CSHH-HHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGH
T ss_pred CCEEEEECC---------C---CCHH-HHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccccccc
Confidence 699886432 2 1332 46677888999999999997642 10000000 0001111111
Q ss_pred --HHHHHHHHHHHCC-CeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC--------C
Q 020319 199 --VPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS--------D 267 (327)
Q Consensus 199 --V~rAIr~iK~~fP-dl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS--------D 267 (327)
-.+.|+.+|+.++ ++-||. .|-|.+-+.+. ..-++|||.|.=. +
T Consensus 226 ~~~~~~i~~v~~~~~~~ipvi~------------------~GGI~~~~da~-------~~l~~GAd~V~vg~~~l~~~p~ 280 (311)
T 1jub_A 226 PTALANVRAFYTRLKPEIQIIG------------------TGGIETGQDAF-------EHLLCGATMLQIGTALHKEGPA 280 (311)
T ss_dssp HHHHHHHHHHHTTSCTTSEEEE------------------ESSCCSHHHHH-------HHHHHTCSEEEECHHHHHHCTH
T ss_pred HHHHHHHHHHHHhcCCCCCEEE------------------ECCCCCHHHHH-------HHHHcCCCEEEEchHHHhcCcH
Confidence 2456777777765 565554 36676555443 2224799998311 1
Q ss_pred CCCchHHHHHHHHHHCCCCCc
Q 020319 268 MMDGRVGAIRAALDAEGFQHV 288 (327)
Q Consensus 268 MMDGRV~aIR~aLD~~Gf~~v 288 (327)
...--...+++.|++.||.++
T Consensus 281 ~~~~i~~~l~~~l~~~g~~si 301 (311)
T 1jub_A 281 IFDRIIKELEEIMNQKGYQSI 301 (311)
T ss_dssp HHHHHHHHHHHHHHHHTCCSG
T ss_pred HHHHHHHHHHHHHHHcCCCCH
Confidence 122222456677888999765
No 92
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=55.51 E-value=13 Score=34.32 Aligned_cols=90 Identities=18% Similarity=0.195 Sum_probs=62.5
Q ss_pred HHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC------C-----
Q 020319 202 TIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD------M----- 268 (327)
Q Consensus 202 AIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD------M----- 268 (327)
..|.|++..|+ ++-+.|.+-.|| |.=+-|+-.+.+.+.+-.+.++|||+|.=-. -
T Consensus 39 v~~~i~~~lP~e~~iy~~D~a~~PY------------G~ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~~~al~~lr 106 (274)
T 3uhf_A 39 VLKSLYEARLFDEIIYYGDTARVPY------------GVKDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALR 106 (274)
T ss_dssp HHHHHHHTTCCSEEEEEECTTTCCC------------TTSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHSHHHHH
T ss_pred HHHHHHHHCCCCCEEEEecCCCCCC------------CCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHH
Confidence 57888899984 888999999999 3334455555566666666778999873211 0
Q ss_pred ------CCchH-HHHHHHHHH--CCCCCceeeehhhhhhccccc
Q 020319 269 ------MDGRV-GAIRAALDA--EGFQHVSIMSYTAKYASSFYG 303 (327)
Q Consensus 269 ------MDGRV-~aIR~aLD~--~Gf~~v~IMSYSAKyASsfYG 303 (327)
+=|.| -+++.+... .+..+|+||+=.+--.|.+|-
T Consensus 107 ~~~~iPvigiiepa~~~a~~~~~t~~~~IGVLaT~~Ti~s~~Y~ 150 (274)
T 3uhf_A 107 AKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQ 150 (274)
T ss_dssp HHCSSCEECSHHHHHHHHHHHHCCTTSCEEEEECHHHHHHTHHH
T ss_pred HhcCCCEEcCCHHHHHHHHHhcccCCCeEEEEeccccccHHHHH
Confidence 11556 566777766 577899999887777777664
No 93
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=55.47 E-value=15 Score=34.20 Aligned_cols=67 Identities=18% Similarity=0.220 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHCCC-eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHH
Q 020319 199 VPRTIWLLKDRYPD-LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIR 277 (327)
Q Consensus 199 V~rAIr~iK~~fPd-l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR 277 (327)
+.++++..|+.+|+ ..|+.-|+ .. |+ + ++|+ ++|||+|--+-|--..+..++
T Consensus 185 i~~ai~~~r~~~~~~~~i~vev~-----------------tl--ee-~----~~A~---~aGaD~I~ld~~~~~~l~~~v 237 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEVECL-----------------SE--DE-A----TEAI---EAGADVIMLDNFKGDGLKMCA 237 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECS-----------------SS--HH-H----HHHH---HHTCSEEECCC----------
T ss_pred HHHHHHHHHHhcCcCCeEEEecC-----------------CH--HH-H----HHHH---HcCCCEEEECCCCHHHHHHHH
Confidence 77899999999875 33333111 01 21 1 1222 589999988776667788888
Q ss_pred HHHHHC--CCCCceeee
Q 020319 278 AALDAE--GFQHVSIMS 292 (327)
Q Consensus 278 ~aLD~~--Gf~~v~IMS 292 (327)
+.|+.. ||.++.|.+
T Consensus 238 ~~l~~~~~g~~~v~I~A 254 (294)
T 3c2e_A 238 QSLKNKWNGKKHFLLEC 254 (294)
T ss_dssp -----------CCEEEE
T ss_pred HHhcccccCCCCeEEEE
Confidence 889887 888888764
No 94
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=54.86 E-value=14 Score=32.85 Aligned_cols=52 Identities=27% Similarity=0.476 Sum_probs=37.4
Q ss_pred cCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 144 IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 144 I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
+..+||+. + ..|+.++.+.|...|.+||. . ..| | ...++.++..+|++-+++
T Consensus 111 ~~~i~Gv~--t-----~~e~~~A~~~Gad~vk~Fpa-~-----~~g-------G--~~~lk~l~~~~~~ipvva 162 (224)
T 1vhc_A 111 FPITPGVN--N-----PMAIEIALEMGISAVKFFPA-E-----ASG-------G--VKMIKALLGPYAQLQIMP 162 (224)
T ss_dssp CCEECEEC--S-----HHHHHHHHHTTCCEEEETTT-T-----TTT-------H--HHHHHHHHTTTTTCEEEE
T ss_pred CCEEeccC--C-----HHHHHHHHHCCCCEEEEeeC-c-----ccc-------C--HHHHHHHHhhCCCCeEEE
Confidence 56678841 1 66788899999999999981 0 010 1 578999999999876654
No 95
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=54.82 E-value=25 Score=33.45 Aligned_cols=97 Identities=7% Similarity=-0.041 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeec---------CC--CCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPK---------VP--DALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgv---------i~--~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YT 225 (327)
...+.++.+.+.|...|-|-+- -| +.-.|+.|-.--|.--++.+.|+++|++.+ + -|..++....+.
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~~ 246 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFAHY 246 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEecccccc
Confidence 4666677888999999999652 02 223455554333333457778999999987 5 677777654431
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 020319 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 226 shGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS 266 (327)
.|+- .+.+++...+.|-.+.++|+|.|.=|
T Consensus 247 ----~g~~-------~~~~~~~~~~la~~le~~Gvd~i~v~ 276 (376)
T 1icp_A 247 ----NEAG-------DTNPTALGLYMVESLNKYDLAYCHVV 276 (376)
T ss_dssp ----TTCC-------CSCHHHHHHHHHHHHGGGCCSEEEEE
T ss_pred ----CCCC-------CCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 1221 12345555666777789999998544
No 96
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=54.66 E-value=35 Score=32.26 Aligned_cols=98 Identities=11% Similarity=0.067 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeec-----------CCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPK-----------VPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgv-----------i~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YT 225 (327)
+..+.++.+.+.|...|-|-+- ..+.-.|+.|..--|.--++.+.|+++|+..+ + .|..-+..+.+.
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-pv~vris~~~~~ 240 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAE-RVGVRLAPLTTL 240 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG-GEEEEECSSCCT
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCC-cEEEEEcccccc
Confidence 3555666678999999999531 11233555554433333467778999999986 4 555555543321
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 226 shGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
...| + ..+++...+.|-...++|+|.|.-|.
T Consensus 241 ~~~~------~-----~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 241 NGTV------D-----ADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp TSCC------C-----SSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCC------C-----CCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 1111 1 22455555566667889999887665
No 97
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=54.28 E-value=28 Score=38.20 Aligned_cols=120 Identities=17% Similarity=0.140 Sum_probs=74.6
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
..+.++.+.+.|+..|-+|..+. .---+.++++.+|+.- ..|..++| ||.|=-| +.
T Consensus 647 ~~~~i~~a~~~g~d~irif~sl~-------------~~~~~~~~i~~~~~~g--~~v~~~i~---~~~~~~d------~~ 702 (1165)
T 2qf7_A 647 VKYFVRQAAKGGIDLFRVFDCLN-------------WVENMRVSMDAIAEEN--KLCEAAIC---YTGDILN------SA 702 (1165)
T ss_dssp HHHHHHHHHHHTCCEEEEECTTC-------------CGGGGHHHHHHHHHTT--CEEEEEEE---CCSCTTC------TT
T ss_pred HHHHHHHHHhcCcCEEEEEeeHH-------------HHHHHHHHHHHHHhcc--ceEEEEEE---EeccccC------CC
Confidence 45678999999999999996321 1125667899999875 55555665 5544111 11
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--------hHHHHHHHHHHC-CC--CCceeeehhhhhhccccc
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVVSPSDMMDG--------RVGAIRAALDAE-GF--QHVSIMSYTAKYASSFYG 303 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDG--------RV~aIR~aLD~~-Gf--~~v~IMSYSAKyASsfYG 303 (327)
....+++.+.+.+-...++|||+|+-.||.=. .|.++|+.++-. ++ +|+.=|+.+.-.+..-.|
T Consensus 703 -r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAvAn~laAv~aG 777 (1165)
T 2qf7_A 703 -RPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEAG 777 (1165)
T ss_dssp -SGGGCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEECBTTSCHHHHHHHHHHTT
T ss_pred -CCCCCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHhC
Confidence 11235677777777888999999999998752 466666665210 21 344445555444433333
No 98
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=54.07 E-value=27 Score=29.41 Aligned_cols=81 Identities=25% Similarity=0.356 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCCCCCcceeecCCCc
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
.++++++.+.|+..|.+|+ ..+.|+ ..++.+++.+| ++-|++ .|-
T Consensus 111 ~~e~~~a~~~G~d~v~v~~--------------t~~~g~--~~~~~l~~~~~~~ipvia------------------~GG 156 (212)
T 2v82_A 111 ATEAFTALEAGAQALKIFP--------------SSAFGP--QYIKALKAVLPSDIAVFA------------------VGG 156 (212)
T ss_dssp HHHHHHHHHTTCSEEEETT--------------HHHHCH--HHHHHHHTTSCTTCEEEE------------------ESS
T ss_pred HHHHHHHHHCCCCEEEEec--------------CCCCCH--HHHHHHHHhccCCCeEEE------------------eCC
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeec-CCCCCCc---------hHHHHHHHHHH
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVVS-PSDMMDG---------RVGAIRAALDA 282 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiVA-PSDMMDG---------RV~aIR~aLD~ 282 (327)
|. .+++..+ .++|||.|+ =|..|.+ ++..+++++.+
T Consensus 157 I~-~~~i~~~-------~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~~~~~ 202 (212)
T 2v82_A 157 VT-PENLAQW-------IDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYRE 202 (212)
T ss_dssp CC-TTTHHHH-------HHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CC-HHHHHHH-------HHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHHHHHH
No 99
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=53.91 E-value=12 Score=34.37 Aligned_cols=90 Identities=17% Similarity=0.196 Sum_probs=50.1
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCC-CCCcccccCcCCCC---cHHHHHHHHHHHCCCeeEEeeecc---cCCCCCCccee
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDA-LKSPTGDEAYNDNG---LVPRTIWLLKDRYPDLVIYTDVAL---DPYSSDGHDGI 232 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~-~KD~~Gs~A~n~~g---lV~rAIr~iK~~fPdl~VitDVcL---c~YTshGHcGI 232 (327)
.+.++.+++.|++.|.+|.-..+. .+...+ ...+. .+.++|+..|+. .+-|-+.++. |||.
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~---~s~ee~l~~~~~~v~~a~~~--G~~V~~~l~~~~~~e~~------- 153 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNIN---CSIKDSLERFVPVLEAARQH--QVRVRGYISCVLGCPYD------- 153 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHS---SCHHHHHHHHHHHHHHHHHT--TCEEEEEEECTTCBTTT-------
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhC---CCHHHHHHHHHHHHHHHHHC--CCeEEEEEEEEeeCCcC-------
Confidence 467888999999999998643210 000000 01111 234455666655 3445444432 3431
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC
Q 020319 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM 269 (327)
Q Consensus 233 l~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMM 269 (327)
+..+ .+.+.+.+-...++|||.|+-.|+.
T Consensus 154 ----~~~~----~~~~~~~~~~~~~~G~d~i~l~DT~ 182 (302)
T 2ftp_A 154 ----GDVD----PRQVAWVARELQQMGCYEVSLGDTI 182 (302)
T ss_dssp ----BCCC----HHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred ----CCCC----HHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 2222 3445555556668999999999865
No 100
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=53.42 E-value=11 Score=34.22 Aligned_cols=54 Identities=24% Similarity=0.451 Sum_probs=41.4
Q ss_pred cccCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 142 TPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 142 ~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
..+..|||+. + ..|+..+.++|...|.+||- . ..| | ...|+.|+.-||++-+++
T Consensus 126 ~gi~~ipGv~--T-----ptEi~~A~~~Gad~vK~FPa-~-----~~g-------G--~~~lkal~~p~p~ip~~p 179 (232)
T 4e38_A 126 IGIDIVPGVN--N-----PSTVEAALEMGLTTLKFFPA-E-----ASG-------G--ISMVKSLVGPYGDIRLMP 179 (232)
T ss_dssp HTCEEECEEC--S-----HHHHHHHHHTTCCEEEECST-T-----TTT-------H--HHHHHHHHTTCTTCEEEE
T ss_pred cCCCEEcCCC--C-----HHHHHHHHHcCCCEEEECcC-c-----ccc-------C--HHHHHHHHHHhcCCCeee
Confidence 4678889974 2 67899999999999999994 1 011 2 378999999999977765
No 101
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=52.87 E-value=35 Score=31.09 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=65.2
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcce
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDG 231 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcG 231 (327)
+-.+ .+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 18 iD~~-~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv------------ 76 (292)
T 2vc6_A 18 IDEV-ALHDLVEWQIEEGSFGLVPCGT--------TGESPTLSKSEHEQVVEITIKTANGRVPVIAGA------------ 76 (292)
T ss_dssp ECHH-HHHHHHHHHHHTTCSEEETTSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC------------
T ss_pred cCHH-HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec------------
Confidence 3443 4788888999999999998885 34443222222334455544443 234444411
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 232 IVREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 232 Il~~~G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-+++++ .+-..+++|||-| .|.= --+|-+...|...++. +++||=|-.
T Consensus 77 -----g~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~---~lPiilYn~ 134 (292)
T 2vc6_A 77 -----GSNSTAEAIA----FVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAS---TIPIIVYNI 134 (292)
T ss_dssp -----CCSSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred -----CCccHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEeC
Confidence 2222244544 4444577899954 5521 1278888888888776 569998863
No 102
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=52.82 E-value=16 Score=32.85 Aligned_cols=46 Identities=33% Similarity=0.481 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCeecCC-----C-CCCch--HHHHHHHHHHCCCCCceeeehhhh
Q 020319 250 KQAVSQARAGADVVSPS-----D-MMDGR--VGAIRAALDAEGFQHVSIMSYTAK 296 (327)
Q Consensus 250 k~Als~A~AGADiVAPS-----D-MMDGR--V~aIR~aLD~~Gf~~v~IMSYSAK 296 (327)
.||+.-|+|||++|+|= | -.||. |..|++.++..|| ++-||.=|.|
T Consensus 122 ~Qa~~aa~AGa~~iSpFVgRidd~g~~G~~~v~~i~~~~~~~~~-~t~vl~AS~r 175 (223)
T 1wx0_A 122 NQALLAARAGASYVSPFLGRVDDISWDGGELLREIVEMIQVQDL-PVKVIAASIR 175 (223)
T ss_dssp HHHHHHHHTTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHTTC-SCEEEEBCCC
T ss_pred HHHHHHHHCCCeEEEeccchHhhcCCCHHHHHHHHHHHHHHcCC-CeEEeecccC
Confidence 48888899999999991 1 12443 7889999999998 7888865433
No 103
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=52.71 E-value=10 Score=34.60 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=51.5
Q ss_pred EecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcce
Q 020319 152 RLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDG 231 (327)
Q Consensus 152 r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcG 231 (327)
|+..+ .+++.++.+.++|+..|-|. |..|. ..|+ -+.+-|+.+|+++|++ +..-|+|+-
T Consensus 152 ~~~~~-~~~~~~~~~~~~Ga~~i~l~--------DT~G~--~~P~-~~~~lv~~l~~~~~~~---------~i~~H~Hn~ 210 (298)
T 2cw6_A 152 KISPA-KVAEVTKKFYSMGCYEISLG--------DTIGV--GTPG-IMKDMLSAVMQEVPLA---------ALAVHCHDT 210 (298)
T ss_dssp SCCHH-HHHHHHHHHHHTTCSEEEEE--------ETTSC--CCHH-HHHHHHHHHHHHSCGG---------GEEEEEBCT
T ss_pred CCCHH-HHHHHHHHHHHcCCCEEEec--------CCCCC--cCHH-HHHHHHHHHHHhCCCC---------eEEEEECCC
Confidence 55665 68888999999999987775 33342 2332 3566889999999864 234477763
Q ss_pred eecCCC-ccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 232 IVREDG-VIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 232 Il~~~G-~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
. | -+-| ++.-.+|||++|
T Consensus 211 ~----Gla~An----------~laA~~aGa~~v 229 (298)
T 2cw6_A 211 Y----GQALAN----------TLMALQMGVSVV 229 (298)
T ss_dssp T----SCHHHH----------HHHHHHTTCCEE
T ss_pred C----chHHHH----------HHHHHHhCCCEE
Confidence 2 2 1222 556678999988
No 104
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=52.21 E-value=23 Score=30.47 Aligned_cols=91 Identities=15% Similarity=0.110 Sum_probs=51.5
Q ss_pred HHHHHHHHHCCCeeEEeeecccCC--------CCCCcceeecCCCccccHHHHHHHHHHHHHH-HHcCCCeecCCCCCCc
Q 020319 201 RTIWLLKDRYPDLVIYTDVALDPY--------SSDGHDGIVREDGVIMNDETVHQLCKQAVSQ-ARAGADVVSPSDMMDG 271 (327)
Q Consensus 201 rAIr~iK~~fPdl~VitDVcLc~Y--------TshGHcGIl~~~G~IdND~Tv~~Lak~Als~-A~AGADiVAPSDMMDG 271 (327)
..|+.||+.+|+.-|+.|+-|... -..|=++|+-.. ...+++++.+.+.+-.+ .+.|+|+++|+.
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~--~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T---- 121 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSA--AAHIATIAACKKVADELNGEIQIEIYGNWT---- 121 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEET--TSCHHHHHHHHHHHHHHTCEEEEECCSSCC----
T ss_pred HHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEec--CCCHHHHHHHHHHHHHhCCccceeeeecCC----
Confidence 689999999999888888866421 112444444210 11245666655544332 123445666742
Q ss_pred hHHHHHHHHHHCCCCCce-eeehhhhhhc
Q 020319 272 RVGAIRAALDAEGFQHVS-IMSYTAKYAS 299 (327)
Q Consensus 272 RV~aIR~aLD~~Gf~~v~-IMSYSAKyAS 299 (327)
...+++++ +.|+..+. .|+|.+.+..
T Consensus 122 -~~~~~~~~-~~g~d~v~~~~~~~~~~~g 148 (218)
T 3jr2_A 122 -MQDAKAWV-DLGITQAIYHRSRDAELAG 148 (218)
T ss_dssp -HHHHHHHH-HTTCCEEEEECCHHHHHHT
T ss_pred -HHHHHHHH-HcCccceeeeeccccccCC
Confidence 23455554 34887654 4888877653
No 105
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=52.12 E-value=19 Score=37.81 Aligned_cols=116 Identities=24% Similarity=0.337 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.+++.++++.+.|...|-| ||..|-. .| .-+.+-|+.||+++|++ +..-|+|+-. |
T Consensus 262 ~~~~~a~~l~~~Ga~~I~l--------~DT~G~~--~P-~~v~~lV~~lk~~~p~~---------~I~~H~Hnd~----G 317 (718)
T 3bg3_A 262 YYMGLAEELVRAGTHILCI--------KDMAGLL--KP-TACTMLVSSLRDRFPDL---------PLHIHTHDTS----G 317 (718)
T ss_dssp HHHHHHHHHHHHTCSEEEE--------ECTTSCC--CH-HHHHHHHHHHHHHSTTC---------CEEEECCCTT----S
T ss_pred HHHHHHHHHHHcCCCEEEE--------cCcCCCc--CH-HHHHHHHHHHHHhCCCC---------eEEEEECCCc----c
Confidence 4777777788888776544 3333321 12 23456678888888753 3345777521 2
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCC--CC--CCch--HHHHHHHHHHCCCC---Cceeeehhhhhhc---cccchh
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVSPS--DM--MDGR--VGAIRAALDAEGFQ---HVSIMSYTAKYAS---SFYGPF 305 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVAPS--DM--MDGR--V~aIR~aLD~~Gf~---~v~IMSYSAKyAS---sfYGPF 305 (327)
.=..-++.-.+||||+|==+ .| .-|. +..+=.+|...|+. |..-+.=.++|.+ .+|-||
T Consensus 318 ---------lAvANslaAveAGa~~VD~ti~GlGertGN~~lE~vv~~L~~~g~~tgidl~~L~~~s~~v~~~~~~~~~~ 388 (718)
T 3bg3_A 318 ---------AGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVACTRGTPLDTEVPMERVFDYSEYWEGARGLYAAF 388 (718)
T ss_dssp ---------CHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHHHHHHTGGG
T ss_pred ---------HHHHHHHHHHHhCCCEEEecCcccccccCchhHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHhCCCcCC
Confidence 11224566779999997332 11 1121 34555577767762 2222222334443 566666
Q ss_pred H
Q 020319 306 R 306 (327)
Q Consensus 306 R 306 (327)
-
T Consensus 389 ~ 389 (718)
T 3bg3_A 389 D 389 (718)
T ss_dssp C
T ss_pred c
Confidence 5
No 106
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=52.11 E-value=87 Score=30.82 Aligned_cols=105 Identities=10% Similarity=0.142 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCc--ccccCcCCCCc-----HHHHHHHHHHHCC-CeeEEeeecccCCCCCCc
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSP--TGDEAYNDNGL-----VPRTIWLLKDRYP-DLVIYTDVALDPYSSDGH 229 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~--~Gs~A~n~~gl-----V~rAIr~iK~~fP-dl~VitDVcLc~YTshGH 229 (327)
++.+.++.+.+.|+..|.+.+.... .-|. .+.++---.|. --+.|+.+|+..+ ++-||.
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~~-~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg------------ 378 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTTQ-INDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIA------------ 378 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBSC-CCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEE------------
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcc-cccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEE------------
Confidence 5778888899999999999885321 1111 01111000121 2467888888875 666665
Q ss_pred ceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC-CCC-C--chHHH----HHHHHHHCCCCCc
Q 020319 230 DGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS-DMM-D--GRVGA----IRAALDAEGFQHV 288 (327)
Q Consensus 230 cGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS-DMM-D--GRV~a----IR~aLD~~Gf~~v 288 (327)
.|-|.+-+.. ...-++|||.|.=- .++ . +-+.. +++.|+..||.++
T Consensus 379 ------~GGI~s~~DA-------~e~l~aGAd~Vqigrall~~gP~l~~~i~~~l~~~l~~~G~~si 432 (443)
T 1tv5_A 379 ------SGGIFSGLDA-------LEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNL 432 (443)
T ss_dssp ------ESSCCSHHHH-------HHHHHTTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTCSSS
T ss_pred ------ECCCCCHHHH-------HHHHHcCCCEEEEcHHHHhcChHHHHHHHHHHHHHHHHhCCCCH
Confidence 2556654433 33335899998422 111 1 13333 4556777888655
No 107
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=51.99 E-value=76 Score=31.50 Aligned_cols=156 Identities=15% Similarity=0.165 Sum_probs=92.9
Q ss_pred CCCCCCceeeEEEe---eCCC-CcccCCC--------CCceEe-cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCccc
Q 020319 123 NLSPANFVYPLFIH---EGEE-DTPIGAM--------PGCYRL-GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTG 189 (327)
Q Consensus 123 ~Ls~~dLI~PlFV~---eg~~-~~~I~SM--------PGv~r~-sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~G 189 (327)
..+.++.||=||+. +|.. ......+ +|-|.- .+. ++.+.+..+.++||++|-|=|+.+....+ .+
T Consensus 102 ~~~~~~viY~i~~drF~~gd~~nd~~~~~~~~~~~~~~~~~~gGdl~-gi~~~Ldyl~~LGv~aI~l~Pi~~~~~~~-~~ 179 (601)
T 3edf_A 102 GFGPGDAIYQIMPDRFANGDPSNDNVAGMREQADRRHGGGRHGGDIR-GTIDHLDYIAGLGFTQLWPTPLVENDAAA-YS 179 (601)
T ss_dssp CCCTTCCEEEECHHHHCCSCGGGSSCTTCSCCCCTTSTTSCCCCCHH-HHHHTHHHHHHTTCCEEEESCCEECCCSS-SG
T ss_pred CCCccCeEEEEehHHhcCCCCCcCcCcCcccccCccccccccCcCHH-HHHHHHHHHHHcCCCEEEECccccCCCCC-CC
Confidence 45667789999885 3431 1222222 223332 243 68899999999999999998864332222 12
Q ss_pred ccCcCCCCc------------HHHHHHHHHHHCCCeeEEeeecccCCCCCCc-------------------------cee
Q 020319 190 DEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDPYSSDGH-------------------------DGI 232 (327)
Q Consensus 190 s~A~n~~gl------------V~rAIr~iK~~fPdl~VitDVcLc~YTshGH-------------------------cGI 232 (327)
...|++-.. ..+.|++++++ .|-||-|+-+.+-. ..| +.+
T Consensus 180 ~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~--Gi~VilD~V~NH~~-~~~~~~~~~p~~dw~~~~~~~~~~~~~~~~~ 256 (601)
T 3edf_A 180 YHGYAATDHYRIDPRYGSNEDFVRLSTEARKR--GMGLIQDVVLSHIG-KHHWWMKDLPTPDWINYGGKFVPTQHHRVAV 256 (601)
T ss_dssp GGCCSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSBCC-TTSGGGGSCSSTTSBGGGGSCCBCCCCGGGG
T ss_pred CCCcCccccccccccCCCHHHHHHHHHHHHHc--CCEEEEEECCcccC-CcchhhhhCCccCceeeCCCCCCCccccccc
Confidence 234444333 55666666665 79999999986432 222 111
Q ss_pred ecCCC--------------------ccccHHHHHHHHHHHHHHH-HcCCCeec---CCCCCCchHHHHHHHHHHC
Q 020319 233 VREDG--------------------VIMNDETVHQLCKQAVSQA-RAGADVVS---PSDMMDGRVGAIRAALDAE 283 (327)
Q Consensus 233 l~~~G--------------------~IdND~Tv~~Lak~Als~A-~AGADiVA---PSDMMDGRV~aIR~aLD~~ 283 (327)
.+..+ .-.|.+..+.|.+.+.-.. +.|+|-+= ..-|-..-+..+|+++.+.
T Consensus 257 ~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi~~~GVDGfRlD~~~~~~~~f~~~~~~~v~~~ 331 (601)
T 3edf_A 257 QDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTRRLMAE 331 (601)
T ss_dssp GCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTCSEEEESSGGGSCHHHHHHHHHHHHHH
T ss_pred cCCCCccccccccccccccccccccccCCHHHHHHHHHHHHHHHhhcCCCEEEeeccccCCHHHHHHHHHHHHHh
Confidence 11000 1147778888888888888 78988652 2222235667788888664
No 108
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=51.76 E-value=51 Score=30.35 Aligned_cols=105 Identities=16% Similarity=0.200 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 37 ~l~~lv~~li~~Gv~gi~v~Gt--------tGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv----------------- 91 (304)
T 3l21_A 37 TAARLANHLVDQGCDGLVVSGT--------TGESPTTTDGEKIELLRAVLEAVGDRARVIAGA----------------- 91 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEeCcc--------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC-----------------
Confidence 5888888999999999999995 33333222222334555555543 356666521
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
|...-++|++ .+-..+++|||-| .|.= --+|-+...|+..|.. +++||=|-
T Consensus 92 g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 148 (304)
T 3l21_A 92 GTYDTAHSIR----LAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADAT---ELPMLLYD 148 (304)
T ss_dssp CCSCHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSC---SSCEEEEE
T ss_pred CCCCHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 2222345544 4445567899854 3431 1368888888877765 67999885
No 109
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=51.46 E-value=1.3e+02 Score=29.63 Aligned_cols=91 Identities=21% Similarity=0.252 Sum_probs=59.3
Q ss_pred HHHcCCCeEEEeecCCCCCCCcccccCcCCC--CcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc-cccH
Q 020319 166 ARDVGVNSVVLFPKVPDALKSPTGDEAYNDN--GLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV-IMND 242 (327)
Q Consensus 166 ~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~--glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~-IdND 242 (327)
+.++|..-+.++-. |+.. .....-||. .-+..+++++|+.--|+.|++|=--| -||+++++|. |+-|
T Consensus 214 l~~lG~~v~~~~~~-pDg~---Fp~~~p~P~~~~~l~~l~~~v~~~~aDlgia~DgDaD------R~~vvd~~G~~i~gd 283 (485)
T 3uw2_A 214 FKALGCELVELFTD-IDGN---FPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGD------RLGVVTKDGQIIYPD 283 (485)
T ss_dssp HHHTTCCEEEESCS-CCTT---CCSSCSCTTSGGGGHHHHHHHHHSSCCEEEEECTTSS------CEEEECTTSCBCCHH
T ss_pred HHHcCCeEEEecCc-cCCC---CCCCCcCCCCHHHHHHHHHHHHhhCCCEEEEECCCCC------eEEEEeCCCceECHH
Confidence 45789998877764 3211 122223332 23577888888888899999874332 5789987775 5667
Q ss_pred HHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 243 ETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 243 ~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
..+-.|++.-+.+ .-|..||.|..
T Consensus 284 ~~~alla~~ll~~-~~~~~vv~~v~ 307 (485)
T 3uw2_A 284 RQLMLFAEEVLSR-NPGAQIIYDVK 307 (485)
T ss_dssp HHHHHHHHHHHHH-STTCEEEEETT
T ss_pred HHHHHHHHHHHHh-CCCCeEEEEeC
Confidence 7777777776654 34777888743
No 110
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=51.29 E-value=27 Score=30.73 Aligned_cols=49 Identities=14% Similarity=0.205 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeeccc
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALD 222 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc 222 (327)
++++.++.+++.|++.|-| . .|+..+ .+.|+.++++||++++-+++-++
T Consensus 29 ~~~~~~~al~~gGv~~iel-~-----~k~~~~----------~~~i~~l~~~~~~~~vgagtvi~ 77 (214)
T 1wbh_A 29 HAVPMAKALVAGGVRVLNV-T-----LRTECA----------VDAIRAIAKEVPEAIVGAGTVLN 77 (214)
T ss_dssp GHHHHHHHHHHTTCCEEEE-E-----SCSTTH----------HHHHHHHHHHCTTSEEEEESCCS
T ss_pred HHHHHHHHHHHcCCCEEEE-e-----CCChhH----------HHHHHHHHHHCcCCEEeeCEEEE
Confidence 5889999999999997655 2 243322 34899999999999998877443
No 111
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=51.03 E-value=30 Score=31.67 Aligned_cols=96 Identities=19% Similarity=0.204 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.-+.|++++++.|-..|-+--.+. ..|+ |.+ ..+.+-|+.+++..++..+= =|+ |.|
T Consensus 96 ~Kv~Ea~~Ai~~GAdEIDmViNig-~lk~--g~~-----~~v~~eI~~v~~a~~~~~lK--------------VIl-Et~ 152 (239)
T 3ngj_A 96 VKAYETKVAVEQGAEEVDMVINIG-MVKA--KKY-----DDVEKDVKAVVDASGKALTK--------------VII-ECC 152 (239)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCHH-HHHT--TCH-----HHHHHHHHHHHHHHTTSEEE--------------EEC-CGG
T ss_pred HHHHHHHHHHHcCCCEEEEEeehH-Hhcc--ccH-----HHHHHHHHHHHHHhcCCceE--------------EEE-ecC
Confidence 367899999999999998754332 2342 222 34888899999885442110 122 456
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCC-CCCCc-----hHHHHHHHH
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVSPS-DMMDG-----RVGAIRAAL 280 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVAPS-DMMDG-----RV~aIR~aL 280 (327)
.+ +|+.+..+++.| .+||||+|=-| .---| -|.-+|+..
T Consensus 153 ~L-t~eei~~a~~ia---~~aGADfVKTSTGf~~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 153 YL-TNEEKVEVCKRC---VAAGAEYVKTSTGFGTHGATPEDVKLMKDTV 197 (239)
T ss_dssp GS-CHHHHHHHHHHH---HHHTCSEEECCCSSSSCCCCHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHH---HHHCcCEEECCCCCCCCCCCHHHHHHHHHhh
Confidence 53 566677666665 48999999988 44434 566666654
No 112
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=50.88 E-value=43 Score=32.67 Aligned_cols=47 Identities=19% Similarity=0.299 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
...+.++.+++.|+..|.|-.. .|. + ..+...|+.||+.+|++.|+.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~--------~G~----~-~~~~~~i~~i~~~~~~~pvi~ 301 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSS--------QGN----S-VYQIAMVHYIKQKYPHLQVIG 301 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCS--------CCC----S-HHHHHHHHHHHHHCTTCEEEE
T ss_pred hhHHHHHHHHHcCCCEEEeecc--------CCc----c-hhHHHHHHHHHHhCCCCceEe
Confidence 4788899999999998877221 121 1 235678999999999988875
No 113
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=50.81 E-value=24 Score=35.69 Aligned_cols=124 Identities=12% Similarity=0.172 Sum_probs=81.7
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCc------------HHHHHHHHHHHCCCeeEEeeecc
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVAL 221 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~gl------------V~rAIr~iK~~fPdl~VitDVcL 221 (327)
.+. ++.+.+..+.++||++|-|-|+.+-. ...+..|++-+. +.+.|++++++ .|-||.|+-+
T Consensus 152 ~~~-~~~~~L~yl~~lGv~~v~l~Pi~~~~---~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~--Gi~VilD~V~ 225 (618)
T 3m07_A 152 TFR-AAIAKLPYLAELGVTVIEVMPVAQFG---GERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGY--GLSVVLDIVL 225 (618)
T ss_dssp SHH-HHHTTHHHHHHHTCCEEEECCCEECS---SSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred CHH-HHHHHHHHHHHcCCCEEEeCChhccC---CCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHC--CCEEEEeecC
Confidence 343 68888999999999999998862110 112233444333 66677777776 7999999998
Q ss_pred cCCCCCCcc------eeecCC-----C---ccccHHHHHHHHHHHHHHH-HcCCCee---cCCCC----CCchHHHHHHH
Q 020319 222 DPYSSDGHD------GIVRED-----G---VIMNDETVHQLCKQAVSQA-RAGADVV---SPSDM----MDGRVGAIRAA 279 (327)
Q Consensus 222 c~YTshGHc------GIl~~~-----G---~IdND~Tv~~Lak~Als~A-~AGADiV---APSDM----MDGRV~aIR~a 279 (327)
......++- ....++ | ...|.+..+.|.+.+.-.. +.|+|-+ +...| -..-+..|++.
T Consensus 226 NH~~~~~~~~~~~~~~~~~~~~~~~wg~~ln~~~p~V~~~i~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~~~ 305 (618)
T 3m07_A 226 NHFGPEGNYLPLLAPAFFHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHLDGLRFDAIDQIEDSSARHVLVEIAQR 305 (618)
T ss_dssp SCCCSSSCCHHHHCGGGEEEEEEETTEEEECTTSHHHHHHHHHHHHHHHHHTTCSEEEETTGGGCCCCSSSCHHHHHHHH
T ss_pred ccCCCCcccccccCchhhcCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccEEEecchhhhcccchHHHHHHHHHH
Confidence 765443321 011000 0 2357888888999999889 7899865 44455 34578888888
Q ss_pred HHHC
Q 020319 280 LDAE 283 (327)
Q Consensus 280 LD~~ 283 (327)
+.+.
T Consensus 306 v~~~ 309 (618)
T 3m07_A 306 IRED 309 (618)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 114
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=50.53 E-value=16 Score=33.75 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=44.5
Q ss_pred ecchhhHHHHHHH-HHHcCCCeEEEeecCCCCCCCccccc---CcCCCC-----------cHHHHHHHHHHHCCCeeEEe
Q 020319 153 LGWRHGLVQEVAK-ARDVGVNSVVLFPKVPDALKSPTGDE---AYNDNG-----------LVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 153 ~sid~~l~~ev~~-~~~lGI~sVlLFgvi~~~~KD~~Gs~---A~n~~g-----------lV~rAIr~iK~~fPdl~Vit 217 (327)
|.++ +|.+|+++ +.++|+.+|-|=|+......+..|.. .|++-. =..+.|++++++ .|-||.
T Consensus 19 W~w~-~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~--Gi~Vil 95 (496)
T 4gqr_A 19 WRWV-DIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNV--GVRIYV 95 (496)
T ss_dssp CCHH-HHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHT--TCEEEE
T ss_pred CCHH-HHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHC--CCEEEE
Confidence 4565 58889887 99999999999986321111111222 333322 256667777666 799999
Q ss_pred eecccC
Q 020319 218 DVALDP 223 (327)
Q Consensus 218 DVcLc~ 223 (327)
||-+-+
T Consensus 96 D~V~NH 101 (496)
T 4gqr_A 96 DAVINH 101 (496)
T ss_dssp EECCSE
T ss_pred EEccCc
Confidence 998865
No 115
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=50.46 E-value=23 Score=32.28 Aligned_cols=106 Identities=16% Similarity=0.196 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+... .+-||+=|
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv----------------- 77 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDAIIVCGT--------TGEATTMTETERKETIKFVIDKVNKRIPVIAGT----------------- 77 (291)
T ss_dssp HHHHHHHHHHHTTCCEEEESSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-----------------
Confidence 5788888999999999999985 344433222223445555554432 34455411
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-.++++ .+-..+++|||-| .|.= --+|-+...|+..++. +++||=|-.
T Consensus 78 g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~---~lPiilYn~ 135 (291)
T 3a5f_A 78 GSNNTAASIA----MSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAV---STPIIIYNV 135 (291)
T ss_dssp CCSSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGC---CSCEEEEEC
T ss_pred CcccHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2222344544 4444577899964 4432 1256666666655544 578888863
No 116
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=50.43 E-value=33 Score=30.45 Aligned_cols=49 Identities=20% Similarity=0.410 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeeccc
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALD 222 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc 222 (327)
++++.++.+++.||+.|-| . .|+..+ .+.|+.++++||+++|.+++.++
T Consensus 39 ~~~~~~~al~~gGv~~iel-~-----~k~~~~----------~~~i~~l~~~~~~~~igagtvl~ 87 (225)
T 1mxs_A 39 DILPLADALAAGGIRTLEV-T-----LRSQHG----------LKAIQVLREQRPELCVGAGTVLD 87 (225)
T ss_dssp GHHHHHHHHHHTTCCEEEE-E-----SSSTHH----------HHHHHHHHHHCTTSEEEEECCCS
T ss_pred HHHHHHHHHHHCCCCEEEE-e-----cCCccH----------HHHHHHHHHhCcccEEeeCeEee
Confidence 5889999999999997655 2 243322 35799999999999998887543
No 117
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=50.30 E-value=36 Score=30.70 Aligned_cols=87 Identities=17% Similarity=0.155 Sum_probs=56.4
Q ss_pred cCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCc-------ceeecCCCcc--ccHHHHHHHHHHHHHHHHcCCC
Q 020319 191 EAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGH-------DGIVREDGVI--MNDETVHQLCKQAVSQARAGAD 261 (327)
Q Consensus 191 ~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGH-------cGIl~~~G~I--dND~Tv~~Lak~Als~A~AGAD 261 (327)
.--|++-+..+|+++|++. |+++. |. +.+.-+ +-++.- |+- ....+.+.+.+..+.+++.|-+
T Consensus 23 GpGd~~lLTl~A~~~L~~A--DvV~~-d~----~~~~~ll~~~~~~~~~~~~-~k~~~~~~~~~~~i~~~l~~~~~~G~~ 94 (280)
T 1s4d_A 23 GPGDPGLLTLHAANALRQA--DVIVH-DA----LVNEDCLKLARPGAVLEFA-GKRGGKPSPKQRDISLRLVELARAGNR 94 (280)
T ss_dssp BSSCTTSSBHHHHHHHHHC--SEEEE-CS----CSCTTGGGGSSTTCCEEEC-SCCC--CCCCHHHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHHhC--CEEEE-cC----CCCHHHHHhccCCCEEEec-cccccccccCHHHHHHHHHHHHhCCCe
Confidence 3368889999999999997 66665 32 222111 112210 110 1123456677778888999988
Q ss_pred eecCCC---CCCchHHHHHHHHHHCCC
Q 020319 262 VVSPSD---MMDGRVGAIRAALDAEGF 285 (327)
Q Consensus 262 iVAPSD---MMDGRV~aIR~aLD~~Gf 285 (327)
|+=-++ +.=|+-+.+.+.|.++|+
T Consensus 95 Vv~L~~GDP~i~g~g~~l~~~l~~~gi 121 (280)
T 1s4d_A 95 VLRLKGGDPFVFGRGGEEALTLVEHQV 121 (280)
T ss_dssp EEEEESBCTTSSSSHHHHHHHHHTTTC
T ss_pred EEEEcCCCCccccCHHHHHHHHHHCCC
Confidence 887665 333888899999999887
No 118
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=50.15 E-value=45 Score=30.88 Aligned_cols=104 Identities=21% Similarity=0.247 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~Gt--------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv----------------- 100 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGS--------TGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV----------------- 100 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-----------------
Confidence 5788888999999999999985 34433322222344555555543 345455421
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---c-----CCCCCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---S-----PSDMMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---A-----PSDMMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .+-..+++|||-| . ||+ ||-+...|+..+..+ ++||=|-.
T Consensus 101 g~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~--~~l~~~f~~va~a~~---lPiilYn~ 158 (315)
T 3na8_A 101 SDLTTAKTVR----RAQFAESLGAEAVMVLPISYWKLNE--AEVFQHYRAVGEAIG---VPVMLYNN 158 (315)
T ss_dssp CCSSHHHHHH----HHHHHHHTTCSEEEECCCCSSCCCH--HHHHHHHHHHHHHCS---SCEEEEEC
T ss_pred CCCCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCH--HHHHHHHHHHHHhCC---CcEEEEeC
Confidence 2223345554 4555567899964 2 343 799999999998874 69998863
No 119
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=49.93 E-value=16 Score=32.41 Aligned_cols=45 Identities=31% Similarity=0.389 Sum_probs=30.0
Q ss_pred HHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 201 rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
..|+.||+. +..|+.|+-| + |+-.|++..++. ++++|||+|.=.-
T Consensus 46 ~~v~~lr~~--~~~v~lD~kl---------------~--Dip~t~~~~~~~---~~~~Gad~vTvH~ 90 (246)
T 2yyu_A 46 AIVAFLKEQ--GHAVFLDLKL---------------H--DIPNTVKQAMKG---LARVGADLVNVHA 90 (246)
T ss_dssp HHHHHHHHT--TCEEEEEEEE---------------C--SCHHHHHHHHHH---HHHTTCSEEEEEG
T ss_pred HHHHHHHHC--CCeEEEEeec---------------c--cchHHHHHHHHH---HHhcCCCEEEEEC
Confidence 467888876 4567777765 2 566777765444 4789999985443
No 120
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=49.79 E-value=21 Score=33.27 Aligned_cols=85 Identities=21% Similarity=0.247 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.+-+.++++.++|...|=+ + .|+-..+ +---.+.|+.+|+. .+.|++.| |. +++
T Consensus 86 ~~~~yl~~~k~lGf~~iEi----S------~G~i~l~-~~~~~~~I~~~~~~--G~~v~~Ev-----------G~--k~~ 139 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEI----S------DGSSDIS-LEERNNAIKRAKDN--GFMVLTEV-----------GK--KMP 139 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEE----C------CSSSCCC-HHHHHHHHHHHHHT--TCEEEEEE-----------CC--SSH
T ss_pred cHHHHHHHHHHcCCCEEEE----C------CCcccCC-HHHHHHHHHHHHHC--CCEEeeec-----------cc--cCC
Confidence 4677889999999999876 1 2333332 23356788888887 47777777 21 223
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCch
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGR 272 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGR 272 (327)
.-+...+++.+.+++-..-+||||.| |.++|
T Consensus 140 ~~~~~~~~~~~I~~~~~~LeAGA~~V----iiEar 170 (251)
T 1qwg_A 140 DKDKQLTIDDRIKLINFDLDAGADYV----IIEGR 170 (251)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHTCSEE----EECCT
T ss_pred cccCCCCHHHHHHHHHHHHHCCCcEE----EEeee
Confidence 23445688999999999999999998 55554
No 121
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=49.70 E-value=61 Score=28.68 Aligned_cols=46 Identities=11% Similarity=0.115 Sum_probs=32.5
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeee
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDV 219 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDV 219 (327)
.++++++++.|...|+|-.. ..+ +| ..+.+.++.+|+. ++.+++|+
T Consensus 91 ~~~i~~~~~aGad~I~l~~~---~~~--------~p-~~l~~~i~~~~~~--g~~v~~~v 136 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDAS---FRS--------RP-VDIDSLLTRIRLH--GLLAMADC 136 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECC---SSC--------CS-SCHHHHHHHHHHT--TCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECcc---ccC--------Ch-HHHHHHHHHHHHC--CCEEEEec
Confidence 56788999999998866332 111 22 3677788888875 78888875
No 122
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=49.47 E-value=16 Score=32.25 Aligned_cols=44 Identities=27% Similarity=0.345 Sum_probs=29.6
Q ss_pred HHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 020319 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 201 rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS 266 (327)
..|+.||+. +..|+.|+-| + |+-.|++..++. ++++|||+|.=.
T Consensus 45 ~~v~~l~~~--~~~v~lD~kl---------------~--Dip~t~~~~~~~---~~~~Gad~vtvH 88 (239)
T 1dbt_A 45 SIVKQLKER--NCELFLDLKL---------------H--DIPTTVNKAMKR---LASLGVDLVNVH 88 (239)
T ss_dssp HHHHHHHHT--TCEEEEEEEE---------------C--SCHHHHHHHHHH---HHTTTCSEEEEE
T ss_pred HHHHHHHHC--CCcEEEEecc---------------c--cchHHHHHHHHH---HHhcCCCEEEEe
Confidence 467788875 4567777755 2 567777765544 578999998533
No 123
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=49.23 E-value=31 Score=31.15 Aligned_cols=90 Identities=16% Similarity=0.148 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCC-CCCcccccCcCCCCcHHH---HHHHHHHHCCCeeEEeeecc---cCCCCCCccee
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDA-LKSPTGDEAYNDNGLVPR---TIWLLKDRYPDLVIYTDVAL---DPYSSDGHDGI 232 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~-~KD~~Gs~A~n~~glV~r---AIr~iK~~fPdl~VitDVcL---c~YTshGHcGI 232 (327)
.+.++.+.+.|++.|.+|.-.++. .+-.. ..+.+.-+.+ +|+.+|+. .+-|-+.++. |||
T Consensus 82 ~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~---~~~~~e~~~~~~~~v~~a~~~--G~~V~~~l~~~~~~e~-------- 148 (295)
T 1ydn_A 82 MKGYEAAAAAHADEIAVFISASEGFSKANI---NCTIAESIERLSPVIGAAIND--GLAIRGYVSCVVECPY-------- 148 (295)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHT---SSCHHHHHHHHHHHHHHHHHT--TCEEEEEEECSSEETT--------
T ss_pred HHHHHHHHHCCCCEEEEEEecCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHc--CCeEEEEEEEEecCCc--------
Confidence 456788999999999999632210 00000 0122233444 45555655 3555555542 233
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC
Q 020319 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM 269 (327)
Q Consensus 233 l~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMM 269 (327)
+...|. +.+.+.+-...++|||.|+-.|+.
T Consensus 149 ----~~~~~~---~~~~~~~~~~~~~G~d~i~l~Dt~ 178 (295)
T 1ydn_A 149 ----DGPVTP---QAVASVTEQLFSLGCHEVSLGDTI 178 (295)
T ss_dssp ----TEECCH---HHHHHHHHHHHHHTCSEEEEEETT
T ss_pred ----CCCCCH---HHHHHHHHHHHhcCCCEEEecCCC
Confidence 222333 344444455567899999988754
No 124
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=49.18 E-value=63 Score=29.34 Aligned_cols=105 Identities=18% Similarity=0.195 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|.. |+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~Gtt--------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv----------------- 77 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTT--------GEASTLSMEEHTQVIKEIIRVANKRIPIIAGT----------------- 77 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTT--------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHCCCCEEEECccc--------cccccCCHHHHHHHHHHHHHHhCCCCeEEEeC-----------------
Confidence 57788889999999999999852 3322211111234455554443 345555522
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
|...-++|++ .+-..+++|||-| .|.= --||-+...|+..+.. +++||=|-
T Consensus 78 g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~---~lPiilYn 134 (291)
T 3tak_A 78 GANSTREAIE----LTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAV---ELPLILYN 134 (291)
T ss_dssp CCSSHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred CCCCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 2223345554 4444567899964 3431 1278899999988887 57999885
No 125
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=48.96 E-value=25 Score=32.00 Aligned_cols=101 Identities=15% Similarity=0.203 Sum_probs=59.3
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCC-CCCcccccCcCCCC---cHHHHHHHHHHHCCCeeEEeeecc---cCCCCCCccee
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDA-LKSPTGDEAYNDNG---LVPRTIWLLKDRYPDLVIYTDVAL---DPYSSDGHDGI 232 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~-~KD~~Gs~A~n~~g---lV~rAIr~iK~~fPdl~VitDVcL---c~YTshGHcGI 232 (327)
.+.++.+.+.|++.|-+|....+. .+...+ .+.+. .+.++|+.+|+. .+-|..+++. |||
T Consensus 83 ~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~---~~~~e~l~~~~~~i~~a~~~--G~~v~~~l~~~~~~~~-------- 149 (298)
T 2cw6_A 83 LKGFEAAVAAGAKEVVIFGAASELFTKKNIN---CSIEESFQRFDAILKAAQSA--NISVRGYVSCALGCPY-------- 149 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHHS---CCHHHHHHHHHHHHHHHHHT--TCEEEEEEETTTCBTT--------
T ss_pred HHhHHHHHHCCCCEEEEEecCCHHHHHHHhC---CCHHHHHHHHHHHHHHHHHC--CCeEEEEEEEEeeCCc--------
Confidence 456888999999999999854321 011111 01122 344556666665 3455556553 232
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------chHHHHHHHH
Q 020319 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------GRVGAIRAAL 280 (327)
Q Consensus 233 l~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD--------GRV~aIR~aL 280 (327)
.|.. +.+.+.+.+-...++|||.|.-.|+.= -.|.++|+.+
T Consensus 150 ---~~~~----~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 150 ---EGKI----SPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp ---TBSC----CHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHS
T ss_pred ---CCCC----CHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhC
Confidence 2332 234555556666789999999998863 2466666665
No 126
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=48.92 E-value=17 Score=33.93 Aligned_cols=58 Identities=12% Similarity=0.153 Sum_probs=46.2
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEee
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTD 218 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitD 218 (327)
++.+ ++.+++.++.+.|-.-|=|... |+.|....|++ ...+++..||++-||++|---
T Consensus 31 vTpe-Eia~~A~~~~~AGAaivHlH~R------d~~G~ps~d~~-~~~e~~~~IR~~~pd~ii~~T 88 (284)
T 3chv_A 31 ITVS-EQVESTQEAFEAGAAIAHCHVR------NDDGTPSSDPD-RFARLTEGLHTHCPGMIVQFS 88 (284)
T ss_dssp CSHH-HHHHHHHHHHHHTCCEEEECEE------CTTSCEECCHH-HHHHHHHHHHHHSTTCEEEEC
T ss_pred CCHH-HHHHHHHHHHHcCCcEEEeeec------CCCCCcCCCHH-HHHHHHHHHHHhCCCeEEEeC
Confidence 4665 7999999999999988888764 44477777664 788899999999999888653
No 127
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=48.91 E-value=59 Score=29.76 Aligned_cols=19 Identities=16% Similarity=0.183 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHcCCCeEEE
Q 020319 158 GLVQEVAKARDVGVNSVVL 176 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlL 176 (327)
...+.++.+.+.|+..|-|
T Consensus 33 ~~~~~~~~l~~~GaD~iEl 51 (267)
T 3vnd_A 33 LSLKIIQTLVDNGADALEL 51 (267)
T ss_dssp HHHHHHHHHHHTTCSSEEE
T ss_pred HHHHHHHHHHHcCCCEEEE
Confidence 4788888999999987765
No 128
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=48.65 E-value=35 Score=31.09 Aligned_cols=106 Identities=13% Similarity=0.155 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv----------------- 77 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGT--------TGESATLNHDEHADVVMMTLDLADGRIPVIAGT----------------- 77 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec-----------------
Confidence 4778888999999999999995 33333222122334444444433 234455411
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .+-..+++|||-| .|.= --+|-+...|...++. +++||=|-.
T Consensus 78 g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~---~lPiilYn~ 135 (292)
T 2ojp_A 78 GANATAEAIS----LTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT---DLPQILYNV 135 (292)
T ss_dssp CCSSHHHHHH----HHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC---SSCEEEECC
T ss_pred CCccHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2223345554 3444467899954 4432 1267777777777654 579998864
No 129
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=47.74 E-value=29 Score=31.72 Aligned_cols=71 Identities=18% Similarity=0.232 Sum_probs=47.9
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCccee
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGI 232 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGI 232 (327)
++++ -+++++++.+.|...|+|.. +++ .-+.++++.++..||++.|.+
T Consensus 187 vev~--tlee~~~A~~aGaD~I~ld~--------------~~~-~~l~~~v~~l~~~~~~~~i~A--------------- 234 (273)
T 2b7n_A 187 IECE--SFEEAKNAMNAGADIVMCDN--------------LSV-LETKEIAAYRDAHYPFVLLEA--------------- 234 (273)
T ss_dssp EEES--SHHHHHHHHHHTCSEEEEET--------------CCH-HHHHHHHHHHHHHCTTCEEEE---------------
T ss_pred EEcC--CHHHHHHHHHcCCCEEEECC--------------CCH-HHHHHHHHHhhccCCCcEEEE---------------
Confidence 3554 24889999999999888743 112 245677888888888876654
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 020319 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 233 l~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS 266 (327)
.|-| |-+++. .++++|||.|+=+
T Consensus 235 ---sGGI-~~~ni~-------~~~~aGaD~i~vG 257 (273)
T 2b7n_A 235 ---SGNI-SLESIN-------AYAKSGVDAISVG 257 (273)
T ss_dssp ---ESSC-CTTTHH-------HHHTTTCSEEECT
T ss_pred ---ECCC-CHHHHH-------HHHHcCCcEEEEc
Confidence 2444 444444 5678999998753
No 130
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=47.68 E-value=14 Score=35.01 Aligned_cols=79 Identities=14% Similarity=0.220 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.+-+.++++.++|...|=| + .|+-..+++ .=.++|++.-+++.|++.| |.= ++
T Consensus 111 ~~~~yl~~~k~lGF~~IEI----S------dGti~l~~~----~~~~lI~~a~~~f~Vl~Ev-----------G~K--~~ 163 (276)
T 1u83_A 111 KVNEFHRYCTYFGCEYIEI----S------NGTLPMTNK----EKAAYIADFSDEFLVLSEV-----------GSK--DA 163 (276)
T ss_dssp CHHHHHHHHHHTTCSEEEE----C------CSSSCCCHH----HHHHHHHHHTTTSEEEEEC-----------SCC--C-
T ss_pred cHHHHHHHHHHcCCCEEEE----C------CCcccCCHH----HHHHHHHHHHhhcEEeeec-----------ccc--Cc
Confidence 4778889999999999876 1 233333221 2234555566669999988 222 23
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
..+...+++.+.+++-..-+||||.|
T Consensus 164 ~~~~~~~~~~~I~~~~~dLeAGA~~V 189 (276)
T 1u83_A 164 ELASRQSSEEWLEYIVEDMEAGAEKV 189 (276)
T ss_dssp -----CCSTHHHHHHHHHHHHTEEEE
T ss_pred cccCCCCHHHHHHHHHHHHHCCCcEE
Confidence 33445678889999999999999998
No 131
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=47.28 E-value=16 Score=35.43 Aligned_cols=137 Identities=18% Similarity=0.271 Sum_probs=83.6
Q ss_pred CCCcccCCCCCCCCCcCCCChhhHhhhccCCCCCCCceeeEEEeeCCC-----CcccCCCCC-------ceEecc--hhh
Q 020319 93 GTPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-----DTPIGAMPG-------CYRLGW--RHG 158 (327)
Q Consensus 93 g~p~~~~~~~~~R~RRlR~~~~lR~l~~Et~Ls~~dLI~PlFV~eg~~-----~~~I~SMPG-------v~r~si--d~~ 158 (327)
|.=+|-|=+|.- - +=.+||+.+-|+-++ +=.|+.-=..--.. .+...|=|. -||+.. ..+
T Consensus 168 GADiVAPSdMMD----G-rV~aIR~aLd~~G~~-~v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~~E 241 (337)
T 1w5q_A 168 GAQVVAPSDMMD----G-RIGAIREALESAGHT-NVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDE 241 (337)
T ss_dssp TCSEEEECSCCT----T-HHHHHHHHHHHTTCT-TCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTTCSHH
T ss_pred CCCeEecccccc----c-HHHHHHHHHHHCCCC-CceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCChHH
Confidence 444555555531 1 124677777776653 23444433322111 244455552 133321 125
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeec---C
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR---E 235 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~---~ 235 (327)
.+.|++.-++.|-.-||+=|- .+.-.-|+.+|++| ++-|.+ |.-.|--..+. +
T Consensus 242 AlrE~~~Di~EGAD~vMVKPa-----------------l~YLDIir~vk~~~-~~Pvaa------YqVSGEYAMikaAa~ 297 (337)
T 1w5q_A 242 ALHEVAADLAEGADMVMVKPG-----------------MPYLDIVRRVKDEF-RAPTFV------YQVSGEYAMHMGAIQ 297 (337)
T ss_dssp HHHHHHHHHHTTCSEEEEESC-----------------GGGHHHHHHHHHHH-CSCEEE------EECHHHHHHHHHHHH
T ss_pred HHHHHHhhHHhCCCEEEEcCC-----------------CchHHHHHHHHHhc-CCCEEE------EEcCcHHHHHHHHHH
Confidence 888999999999999998653 34566899999998 666665 99999888774 4
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
+|-|| ++. +.+.-++.-+||||+|
T Consensus 298 ~GwiD-~~~---v~Esl~~~kRAGAd~I 321 (337)
T 1w5q_A 298 NGWLA-ESV---ILESLTAFKRAGADGI 321 (337)
T ss_dssp TTSSC-TTH---HHHHHHHHHHHTCSEE
T ss_pred cCCcc-HHH---HHHHHHHHHhcCCCEE
Confidence 79999 433 2346678999999986
No 132
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=47.00 E-value=42 Score=31.07 Aligned_cols=104 Identities=19% Similarity=0.186 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~Gt--------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv----------------- 88 (314)
T 3d0c_A 34 GLDDNVEFLLQNGIEVIVPNGN--------TGEFYALTIEEAKQVATRVTELVNGRATVVAGI----------------- 88 (314)
T ss_dssp HHHHHHHHHHHTTCSEECTTSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------cCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC-----------------
Confidence 4778888999999999888884 34443322222344555555443 345566511
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
|. .-.+|++ .+-..+++|||-| .|.= --+|-+...+...++. +++||=|-
T Consensus 89 g~-st~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 144 (314)
T 3d0c_A 89 GY-SVDTAIE----LGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL---DAPSIIYF 144 (314)
T ss_dssp CS-SHHHHHH----HHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS---SSCEEEEE
T ss_pred Cc-CHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 33 3355554 4444577899964 4421 1378888888888876 47999987
No 133
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=46.95 E-value=31 Score=30.51 Aligned_cols=64 Identities=22% Similarity=0.230 Sum_probs=41.0
Q ss_pred HHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC-CchHHHHHHH
Q 020319 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM-DGRVGAIRAA 279 (327)
Q Consensus 201 rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMM-DGRV~aIR~a 279 (327)
..|+.||+. ++..|+.|+-| -|...|++..++. ++++|||+|.=.--+ ...+.+..++
T Consensus 54 ~~v~~l~~~-~g~~v~lD~Kl-----------------~DipnTv~~~~~~---~~~~gad~vtvh~~~G~~~l~~~~~~ 112 (228)
T 3m47_A 54 DIIAEFRKR-FGCRIIADFKV-----------------ADIPETNEKICRA---TFKAGADAIIVHGFPGADSVRACLNV 112 (228)
T ss_dssp HHHHHHHHH-HCCEEEEEEEE-----------------CSCHHHHHHHHHH---HHHTTCSEEEEESTTCHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCeEEEEEee-----------------cccHhHHHHHHHH---HHhCCCCEEEEeccCCHHHHHHHHHH
Confidence 467778874 35667777654 2667888887774 467999996543333 3445566666
Q ss_pred HHHCCC
Q 020319 280 LDAEGF 285 (327)
Q Consensus 280 LD~~Gf 285 (327)
+++.|-
T Consensus 113 ~~~~g~ 118 (228)
T 3m47_A 113 AEEMGR 118 (228)
T ss_dssp HHHHTC
T ss_pred HHhcCC
Confidence 665553
No 134
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=46.30 E-value=33 Score=37.62 Aligned_cols=120 Identities=14% Similarity=0.130 Sum_probs=71.9
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecC-CC
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DG 237 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~-~G 237 (327)
..+.++.+.+.|+.-|-+|--.. |. -....+++.+|+.- -++-.++|.+.+ +++. +.
T Consensus 629 ~~~~v~~a~~~Gvd~irif~~~s----d~---------~~~~~~~~~~~e~g----~~~~~~i~~~~~-----~~~pe~~ 686 (1150)
T 3hbl_A 629 IHKFVQESAKAGIDVFRIFDSLN----WV---------DQMKVANEAVQEAG----KISEGTICYTGD-----ILNPERS 686 (1150)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTC----CG---------GGGHHHHHHHHHTT----CEEEEEEECCSC-----TTCTTTC
T ss_pred HHHHHHHHHhCCcCEEEEEeeCC----HH---------HHHHHHHHHHHHHh----hheeEEEeeccc-----ccChhhc
Confidence 45678999999999998885322 11 12355777777662 333455555432 2321 12
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------chHHHHHHHHHHC-CC--CCceeeehhhhhhccccc
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------GRVGAIRAALDAE-GF--QHVSIMSYTAKYASSFYG 303 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD--------GRV~aIR~aLD~~-Gf--~~v~IMSYSAKyASsfYG 303 (327)
.. .|++.+.+.+-...++|||+|+-.||.= -.|.++|+.++-. ++ +++.=|+.+.-.+..-.|
T Consensus 687 ~~---~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An~laA~~aG 760 (1150)
T 3hbl_A 687 NI---YTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAG 760 (1150)
T ss_dssp SS---SSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHHHHHHHHTT
T ss_pred CC---CCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHHHHHHHHhC
Confidence 22 4567777777778899999999999874 2566777765210 11 344445555554444343
No 135
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=46.19 E-value=33 Score=33.64 Aligned_cols=60 Identities=18% Similarity=0.349 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------Cc---HHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GL---VPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------gl---V~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
++.+.+..+.++||++|-|=|+.+.... ...|+.- |- +.+.|++++++ .|-||-|+-+.+
T Consensus 32 gi~~~ldyl~~lGv~~i~l~Pi~~~~~~----~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~--Gi~vilD~V~NH 103 (555)
T 2ze0_A 32 GIIEKLDYLVELGVDIVWICPIYRSPNA----DNGYDISDYYAIMDEFGTMDDFDELLAQAHRR--GLKVILDLVINH 103 (555)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEECCCT----TTTCSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEEECSB
T ss_pred HHHHHHHHHHHcCCCEEEeCCcccCCCC----CCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccc
Confidence 6888899999999999999886432111 1233332 22 44455555554 799999998865
No 136
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=45.85 E-value=46 Score=31.39 Aligned_cols=93 Identities=17% Similarity=0.273 Sum_probs=61.9
Q ss_pred HHHHHHHHHHcCCCeEEEee----------c-CCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCCC
Q 020319 159 LVQEVAKARDVGVNSVVLFP----------K-VPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSS 226 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFg----------v-i~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YTs 226 (327)
..+-++.+.+.|...|-|-+ - ..+.-+|+.|..--|.--++.+.|+++|++.+ ++.|..-+..+.|..
T Consensus 145 f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~ 224 (343)
T 3kru_A 145 FGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYME 224 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSST
T ss_pred HHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhc
Confidence 45555667889999999953 2 12234677776545555678889999999996 778888777766532
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 020319 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 227 hGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS 266 (327)
+| .+ ++...+.|-.+.++ +|.|--|
T Consensus 225 ---------~g-~~----~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 225 ---------GG-IN----IDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp ---------TS-CC----HHHHHHHHHHHTTT-CSEEEEE
T ss_pred ---------cC-cc----HHHHHHHHHHhhcc-ccEEecc
Confidence 12 22 33344455666777 9988775
No 137
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=45.73 E-value=27 Score=31.72 Aligned_cols=100 Identities=20% Similarity=0.170 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.-+.|++++++.|-..|-+--.+. ..|+ .....+.+=|+.+++...+..+- =|+ |.+
T Consensus 81 ~K~~E~~~Ai~~GAdEIDmVinig-~lk~-------g~~~~v~~ei~~v~~a~~~~~lK--------------vIi-Et~ 137 (231)
T 3ndo_A 81 IKATEAELAVAAGATEIDMVIDVG-AALA-------GDLDAVSADITAVRKAVRAATLK--------------VIV-ESA 137 (231)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCHH-HHHT-------TCHHHHHHHHHHHHHHTTTSEEE--------------EEC-CHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeehH-hhhc-------ccHHHHHHHHHHHHHHccCCceE--------------EEE-ECc
Confidence 357899999999999988743322 2232 12246788899999885431110 022 445
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCC-CC-Cc-----hHHHHHHHH
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVSPSD-MM-DG-----RVGAIRAAL 280 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVAPSD-MM-DG-----RV~aIR~aL 280 (327)
.+.|..|-+.+.+.+..-.+||||+|=-|- -- -| -|.-+|+..
T Consensus 138 ~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 138 ALLEFSGEPLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTV 187 (231)
T ss_dssp HHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHh
Confidence 552222444445555555689999998884 22 34 555566554
No 138
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=45.67 E-value=15 Score=36.53 Aligned_cols=50 Identities=28% Similarity=0.334 Sum_probs=35.9
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCC--CCCC-chHHHHHHHHHHCCCCCceeee
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVSPS--DMMD-GRVGAIRAALDAEGFQHVSIMS 292 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVAPS--DMMD-GRV~aIR~aLD~~Gf~~v~IMS 292 (327)
.-|-++|++ |-..+++||||||==+ ||=| --+..||+.|+..|+ +|++++
T Consensus 34 T~Dv~aTv~----QI~~L~~aG~eiVRvaVp~~~~A~al~~I~~~l~~~~~-~vPLVA 86 (406)
T 4g9p_A 34 TRDVEATTA----QVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGV-EVPLVG 86 (406)
T ss_dssp TTCHHHHHH----HHHHHHHHTCSEEEEECCSHHHHHHHHHHHHHHHHTTC-CCCEEE
T ss_pred cccHHHHHH----HHHHHHHcCCCEEEEecCCHHHHHhHHHHHHHHHhcCC-CCceEe
Confidence 445577776 5567789999998422 3333 236889999999998 888876
No 139
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=45.50 E-value=88 Score=29.47 Aligned_cols=100 Identities=19% Similarity=0.217 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeec---------CC--CCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPK---------VP--DALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgv---------i~--~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTs 226 (327)
+..+.++.+.+.|...|-|-+- -| +.-.|+.|-.--|.--++.+.|+++|+++++-.|.. -|.++..
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~v--rls~~~~ 239 (364)
T 1vyr_A 162 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGI--RVSPIGT 239 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEE--EECCSSC
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEE--EEccccc
Confidence 3556666778999999999541 12 223466555444444567778999999996324443 2333211
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 227 hGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
+.|+- + + ..+++...+.|-...++|+|.|.=+.
T Consensus 240 --~~~~~-~-~----~~~~~~~~~~a~~l~~~G~d~i~v~~ 272 (364)
T 1vyr_A 240 --FQNVD-N-G----PNEEADALYLIEELAKRGIAYLHMSE 272 (364)
T ss_dssp --BTTBC-C-C----TTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred --ccccc-C-C----CCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 11110 1 1 22555566667777899999987654
No 140
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=45.34 E-value=83 Score=27.82 Aligned_cols=46 Identities=13% Similarity=0.153 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeee
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDV 219 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDV 219 (327)
.++++++++.|...|+|-.. ..+ +| ..+.+.++.+|+. ++.+++|+
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~---~~~--------~p-~~l~~~i~~~~~~--g~~v~~~v 136 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGT---ARQ--------RP-VAVEALLARIHHH--HLLTMADC 136 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECC---SSC--------CS-SCHHHHHHHHHHT--TCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECcc---ccC--------CH-HHHHHHHHHHHHC--CCEEEEeC
Confidence 56788999999998876432 111 22 3577788888875 67788775
No 141
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=44.25 E-value=32 Score=30.84 Aligned_cols=48 Identities=21% Similarity=0.478 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHcCC--CeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGV--NSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI--~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
.+...++.+.+.|. +.|.+--.+. -+.+|+.+.++||++-|+| .++|+
T Consensus 144 T~~~ai~~L~~~G~pe~~I~~~~~va-----------------a~egl~~l~~~~P~v~i~t-a~iD~ 193 (217)
T 3dmp_A 144 SAAHAIDVLKRRGVPGERLMFLALVA-----------------APEGVQVFQDAHPDVKLYV-ASLDS 193 (217)
T ss_dssp HHHHHHHHHHTTTCCGGGEEEECSEE-----------------CHHHHHHHHHHCTTCEEEE-SEECC
T ss_pred HHHHHHHHHHHcCCCcCeEEEEEEEe-----------------CHHHHHHHHHHCCCCEEEE-EEecC
Confidence 47888999999999 7777654332 1478999999999998888 44444
No 142
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=44.15 E-value=17 Score=33.98 Aligned_cols=57 Identities=12% Similarity=0.205 Sum_probs=45.4
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
++.+ ++.+++.++.+.|-.-|=|... |++|....|++ ...+++..||++-||++|--
T Consensus 31 vTpe-Eia~~A~~a~~AGAaivHlHvR------d~~G~ps~d~~-~~~e~~~~IR~~~pd~ii~~ 87 (282)
T 2y7e_A 31 ITPE-EQAKEAKACFEAGARVIHLHIR------EDDGRPSQRLD-RFQEAISAIREVVPEIIIQI 87 (282)
T ss_dssp CSHH-HHHHHHHHHHHHTEEEEEECEE------CTTSCEECCHH-HHHHHHHHHHHHCTTSEEEE
T ss_pred CCHH-HHHHHHHHHHHcCCcEEEEeec------CCCCCcCCCHH-HHHHHHHHHHHHCCCeEEEe
Confidence 4565 7999999999999877777654 45677777654 78889999999999988864
No 143
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=44.05 E-value=33 Score=31.28 Aligned_cols=48 Identities=19% Similarity=0.359 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHcCC--CeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGV--NSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI--~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
.+...++.+.+.|. ++|.+.-.+.. +.+++.|.+.||++.|+|. ++|+
T Consensus 171 T~~~ai~~L~~~G~~p~~I~~~~lvaa-----------------p~g~~~l~~~~p~v~I~ta-~ID~ 220 (243)
T 1bd3_D 171 SVCKAIEVLLRLGVKEERIIFVNILAA-----------------PQGIERVFKEYPKVRMVTA-AVDI 220 (243)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEEEC-----------------HHHHHHHHHHCTTSEEEEE-EECS
T ss_pred HHHHHHHHHHHcCCCcceEEEEEEEeC-----------------HHHHHHHHHHCCCCEEEEE-EecC
Confidence 37888899999999 88877654321 4589999999999999987 5554
No 144
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=43.93 E-value=44 Score=34.88 Aligned_cols=104 Identities=19% Similarity=0.230 Sum_probs=69.0
Q ss_pred cchhhHHHHH-HHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCc------------HHHHHHHHHHHCCCeeEEeeec
Q 020319 154 GWRHGLVQEV-AKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVA 220 (327)
Q Consensus 154 sid~~l~~ev-~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~gl------------V~rAIr~iK~~fPdl~VitDVc 220 (327)
++. ++.+++ ..+.++|+++|-|-|+.+. ...++-.|++-+. +.+.|++++++ .|-||.|+.
T Consensus 261 ~~~-~l~~~l~~yLk~lG~t~I~L~Pi~e~---~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~--GI~VilD~V 334 (722)
T 3k1d_A 261 SYR-QLARELTDYIVDQGFTHVELLPVAEH---PFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQA--GIGVIVDWV 334 (722)
T ss_dssp CHH-HHHHHHHHHHHHHTCSEEEESCCEEC---SCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred CHH-HHHHHHHHHHHHcCCCeEEECCcccC---CCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHc--CCEEEEEEE
Confidence 454 578887 7899999999999886321 1123334555444 35666666665 799999999
Q ss_pred ccCCCCCCcc-----e--eec-CC---------C----ccccHHHHHHHHHHHHHHHH-cCCCee
Q 020319 221 LDPYSSDGHD-----G--IVR-ED---------G----VIMNDETVHQLCKQAVSQAR-AGADVV 263 (327)
Q Consensus 221 Lc~YTshGHc-----G--Il~-~~---------G----~IdND~Tv~~Lak~Als~A~-AGADiV 263 (327)
+-....++|. | ... .+ | ...|.+..+.|...++-..+ -|.|-+
T Consensus 335 ~NH~~~~~~~~~~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gvDGf 399 (722)
T 3k1d_A 335 PAHFPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDGL 399 (722)
T ss_dssp TTCCCCCTTTTTTTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCCCEE
T ss_pred eeccCCccchhhcCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 8777665431 1 000 00 1 23578888889999998888 598865
No 145
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=43.89 E-value=33 Score=30.39 Aligned_cols=92 Identities=13% Similarity=0.044 Sum_probs=59.8
Q ss_pred HHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------CC---
Q 020319 202 TIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------MD--- 270 (327)
Q Consensus 202 AIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDM------MD--- 270 (327)
..+.|++.+|+ ++-+.|....||..- ..++-.+.+.+.+-.+.++|||.|.=..= .|
T Consensus 15 v~~~l~~~lP~~~~iy~~D~~~~Pyg~~------------s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~~~~~~~lr 82 (255)
T 2jfz_A 15 VLKSLLKARLFDEIIYYGDSARVPYGTK------------DPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQ 82 (255)
T ss_dssp HHHHHHHTTCCSEEEEEECTTTCCCTTS------------CHHHHHHHHHHHHHHHGGGCCSCEEECCHHHHHHTHHHHH
T ss_pred HHHHHHHHCCCCCEEEEeCCCCCCCCCC------------CHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHHHHH
Confidence 46788888995 677789998888431 33444555666666666779987642221 11
Q ss_pred --------c-hHHHHHHHHHH--CCCCCceeeehhhhhhccccchh
Q 020319 271 --------G-RVGAIRAALDA--EGFQHVSIMSYTAKYASSFYGPF 305 (327)
Q Consensus 271 --------G-RV~aIR~aLD~--~Gf~~v~IMSYSAKyASsfYGPF 305 (327)
| ...+++.++.. .+..+++||+=..--.|.+|--+
T Consensus 83 ~~~~iPvigii~~av~~A~~~~~~~~~rigVlaT~~T~~~~~y~~~ 128 (255)
T 2jfz_A 83 KYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNA 128 (255)
T ss_dssp HHCSSCEECSSHHHHHHHHHHCCCTTSCEEEEECHHHHHHTHHHHH
T ss_pred HhCCCCEEeeeHHHHHHHHHhhcCCCCEEEEEECHHHHhChHHHHH
Confidence 2 44566777766 67789999976556666776543
No 146
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=43.52 E-value=1.3e+02 Score=26.64 Aligned_cols=125 Identities=17% Similarity=0.149 Sum_probs=74.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccC-------------C
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP-------------Y 224 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~-------------Y 224 (327)
.+.+.++++.+.|++.|++.|...- .|.+- + -+++.+..+++.||++.+..-+.-++ +
T Consensus 61 si~~aL~~l~~~G~~~vvV~Pl~l~-----~G~~~---~-di~~~v~~~~~~~~~i~~~~pl~~~~~~~~~l~~~l~~~~ 131 (264)
T 2xwp_A 61 TPLQALQKLAAQGYQDVAIQSLHII-----NGDEY---E-KIVREVQLLRPLFTRLTLGVPLLSSHNDYVQLMQALRQQM 131 (264)
T ss_dssp CHHHHHHHHHHHTCCEEEEEECCSS-----SSHHH---H-HHHHHHHHHGGGCSEEEEECCSSCSHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHhCCCCEEEEEeCccc-----CcHHH---H-HHHHHHHHHHhhCCceEEecCCCCCHHHHHHHHHHHHHhc
Confidence 3667788999999999999997441 35432 2 57788888888899886654333221 2
Q ss_pred CCC-Ccceee-cCCCccccHHHHHHHHHHHHHHHHcCCCe-ecCCCCCCchHHHHHHHHHHCCCCCceeeehh
Q 020319 225 SSD-GHDGIV-REDGVIMNDETVHQLCKQAVSQARAGADV-VSPSDMMDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 225 Tsh-GHcGIl-~~~G~IdND~Tv~~Lak~Als~A~AGADi-VAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
... ...+++ -..|.-+. .-....+.+....+.|-.+ ++.-.. .=.+...=+.|.+.|+++|.|+.|.
T Consensus 132 ~~~~~~~~lvl~gHGs~~~--~~~~~~~~a~~l~~~~~~v~~g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~ 201 (264)
T 2xwp_A 132 PSLRQTEKVVFMGHGASHH--AFAAYACLDHMMTAQRFPARVGAVES-YPEVDILIDSLRDEGVTGVHLMPLM 201 (264)
T ss_dssp CCCCTTEEEEEEECCCSSG--GGHHHHHHHHHHHHTTCSEEEEESSS-SSCHHHHHHHHHHHTCCEEEEEECS
T ss_pred cccCCCCeEEEEECCCCch--hhHHHHHHHHHHHhhCCCEEEEEeCC-CCCHHHHHHHHHHCCCCEEEEEeee
Confidence 221 233544 12243332 2233445554555555322 233222 3445665567778899999999995
No 147
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=43.51 E-value=65 Score=31.16 Aligned_cols=69 Identities=14% Similarity=0.121 Sum_probs=45.0
Q ss_pred cHHHHHHHHHHHCCC---eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHH---cCCCeecCCCCC--
Q 020319 198 LVPRTIWLLKDRYPD---LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQAR---AGADVVSPSDMM-- 269 (327)
Q Consensus 198 lV~rAIr~iK~~fPd---l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~---AGADiVAPSDMM-- 269 (327)
-...|++..++.||+ +.+-+ |.|.+ -.+.|+..++ +|+|+|=.-.|-
T Consensus 192 ~~~~A~~~~~~~~p~~~~~~vlv----DT~d~---------------------~~~~al~~~~~~~~~~d~IrlDs~~~~ 246 (395)
T 2i14_A 192 DQVKAWKYFDEVIEEEVPRIALV----DTFYD---------------------EKVEAVMAAEALGKKLFAVRLDTPSSR 246 (395)
T ss_dssp CHHHHHHHHHHHSCSSSCCEEEC----CSSBC---------------------HHHHHHHHHTTTGGGCCEEEECCCTTT
T ss_pred CHHHHHHHHHHhCCCCccEEEEe----ccchH---------------------HHHHHHHHHHHhccCCcEEEeCCCCCC
Confidence 356899999999996 23333 23311 1122444344 799999877663
Q ss_pred ----CchHHHHHHHHHHCCCCCceee
Q 020319 270 ----DGRVGAIRAALDAEGFQHVSIM 291 (327)
Q Consensus 270 ----DGRV~aIR~aLD~~Gf~~v~IM 291 (327)
-=-|..+|+.||+.||.++-|.
T Consensus 247 ~gd~~~~v~~~r~~ld~~G~~~~~I~ 272 (395)
T 2i14_A 247 RGNFRKIIEEVRWELKVRGYDWVKIF 272 (395)
T ss_dssp CSCHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred cccHHHHHHHHHHHHHhCCCCceEEE
Confidence 2346778999999999777664
No 148
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=43.51 E-value=21 Score=33.56 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=64.3
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcc-------cccCcCCC---------CcHHHHHHHHHHHCC-CeeEE
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPT-------GDEAYNDN---------GLVPRTIWLLKDRYP-DLVIY 216 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~-------Gs~A~n~~---------glV~rAIr~iK~~fP-dl~Vi 216 (327)
+++ ++.+++..+.++|+++|-|=|+.+ ..++.. +...|++. |-...-.+++++..- .|-||
T Consensus 15 ~~~-~i~~~l~yl~~lG~~~i~l~Pi~~-~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~Vi 92 (422)
T 1ua7_A 15 SFN-TLKHNMKDIHDAGYTAIQTSPINQ-VKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVI 92 (422)
T ss_dssp CHH-HHHHTHHHHHHTTCSEEEECCCEE-ECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEE
T ss_pred CHH-HHHHHHHHHHHcCCCEEEeCCccc-cccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 665 699999999999999999988522 111211 12234332 444444444444332 79999
Q ss_pred eeecccCCCCCCc----------------ceeec-CC----------C----ccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 217 TDVALDPYSSDGH----------------DGIVR-ED----------G----VIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 217 tDVcLc~YTshGH----------------cGIl~-~~----------G----~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
.|+-+-......+ |.+-+ .+ | .-.|.+..+.|.+.+.-..+.|+|-+
T Consensus 93 lD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~gvDGf 170 (422)
T 1ua7_A 93 VDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALNDGADGF 170 (422)
T ss_dssp EEECCSBCCSCTTTSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTTBCEECTTSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEeccCcccCCccccCccccCCcccccCCCCCCCcCchhcccccccCCCCccccCCHHHHHHHHHHHHHHHHcCCCEE
Confidence 9998865432211 11110 00 1 12367888888888888888898754
No 149
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=43.46 E-value=53 Score=29.11 Aligned_cols=89 Identities=22% Similarity=0.333 Sum_probs=57.4
Q ss_pred cCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccC
Q 020319 144 IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 144 I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
+..+||+ .. .+|+.++.+.|...|.+||- . ..| | ...++.|+..+|++-+++
T Consensus 120 ~~~i~G~-----~t--~~e~~~A~~~Gad~vk~FPa--~----~~~-------G--~~~lk~i~~~~~~ipvva------ 171 (225)
T 1mxs_A 120 IPLLPGI-----ST--PSEIMMGYALGYRRFKLFPA--E----ISG-------G--VAAIKAFGGPFGDIRFCP------ 171 (225)
T ss_dssp SCEECEE-----CS--HHHHHHHHTTTCCEEEETTH--H----HHT-------H--HHHHHHHHTTTTTCEEEE------
T ss_pred CCEEEee-----CC--HHHHHHHHHCCCCEEEEccC--c----ccc-------C--HHHHHHHHhhCCCCeEEE------
Confidence 4667773 11 47788999999999999981 0 010 1 567899999999877655
Q ss_pred CCCCCcceeecCCCccccHHHHHHHHHHHHHHHH-cCCCeecCCCCCC------chHHHHHHHH
Q 020319 224 YSSDGHDGIVREDGVIMNDETVHQLCKQAVSQAR-AGADVVSPSDMMD------GRVGAIRAAL 280 (327)
Q Consensus 224 YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~-AGADiVAPSDMMD------GRV~aIR~aL 280 (327)
- |-|+ -+++. .+.+ +|||.|+=|.++. |....|++..
T Consensus 172 -----------i-GGI~-~~N~~-------~~l~~~Ga~~v~gSai~~~~~i~~~~~~~i~~~a 215 (225)
T 1mxs_A 172 -----------T-GGVN-PANVR-------NYMALPNVMCVGTTWMLDSSWIKNGDWARIEACS 215 (225)
T ss_dssp -----------B-SSCC-TTTHH-------HHHHSTTBCCEEECTTSCHHHHHTTCHHHHHHHH
T ss_pred -----------E-CCCC-HHHHH-------HHHhccCCEEEEEchhcCchhhccCCHHHHHHHH
Confidence 1 3232 22222 2455 6999999777875 4455555543
No 150
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=43.35 E-value=40 Score=32.90 Aligned_cols=116 Identities=14% Similarity=0.091 Sum_probs=74.5
Q ss_pred hHHHHHH-HHHHcCCCeEEE--eecCCCCCCCccccc---CcCCCCcHHHHHHHHHHHCC--CeeEEeeecccCCCCCCc
Q 020319 158 GLVQEVA-KARDVGVNSVVL--FPKVPDALKSPTGDE---AYNDNGLVPRTIWLLKDRYP--DLVIYTDVALDPYSSDGH 229 (327)
Q Consensus 158 ~l~~ev~-~~~~lGI~sVlL--Fgvi~~~~KD~~Gs~---A~n~~glV~rAIr~iK~~fP--dl~VitDVcLc~YTshGH 229 (327)
++++++. +-++.|-.-|.- |+.-....++ .|-+ ...-.-+..+|+++.|+.-- +.+|..++ .||...
T Consensus 54 e~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~-~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsI--GP~g~~-- 128 (406)
T 1lt8_A 54 EAVRQLHREFLRAGSNVMQTFTFYASEDKLEN-RGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGV--SQTPSY-- 128 (406)
T ss_dssp HHHHHHHHHHHHTTCSEEECSCTTCSSCC--------------CHHHHHHHHHHHHHHHTTTTCEEEEEE--CCCHHH--
T ss_pred HHHHHHHHHHHHhCccceeccccccCHHHHHh-cCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEc--CCcccc--
Confidence 4556665 578999884333 5542222222 2310 12223588999999997642 36777766 688431
Q ss_pred ceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHHHCC
Q 020319 230 DGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALDAEG 284 (327)
Q Consensus 230 cGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD~~G 284 (327)
+ +.+.-|+-.+...+|+-.++++|+|++.=--|.| --+.++.+++.+.|
T Consensus 129 ---l---~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~ 178 (406)
T 1lt8_A 129 ---L---SAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASG 178 (406)
T ss_dssp ---H---TTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGT
T ss_pred ---c---CCCCHHHHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhC
Confidence 1 3466788888899999999999999999999998 45555666776655
No 151
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=43.28 E-value=17 Score=33.10 Aligned_cols=43 Identities=40% Similarity=0.561 Sum_probs=33.3
Q ss_pred HHHHHHHcCCCeecCC-----C-CCCch--HHHHHHHHHHCCCCCceeeehh
Q 020319 251 QAVSQARAGADVVSPS-----D-MMDGR--VGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 251 ~Als~A~AGADiVAPS-----D-MMDGR--V~aIR~aLD~~Gf~~v~IMSYS 294 (327)
||+.-|+|||++|+|= | -.||. |..|++.++..|| ++-||.=|
T Consensus 126 QA~laa~AGa~~iSpFVgRidd~g~dG~~~v~~i~~~~~~~~~-~t~iL~AS 176 (230)
T 1vpx_A 126 QAILAAKAGATYVSPFVGRMDDLSNDGMRMLGEIVEIYNNYGF-ETEIIAAS 176 (230)
T ss_dssp HHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTC-SCEEEEBS
T ss_pred HHHHHHhCCCeEEEeccchhhhccccHHHHHHHHHHHHHHcCC-CeEEEeec
Confidence 7888899999999991 1 12443 7888999999997 78888644
No 152
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=43.13 E-value=21 Score=34.65 Aligned_cols=138 Identities=21% Similarity=0.339 Sum_probs=88.7
Q ss_pred CCCcccCCCCCCCCCcCCCChhhHhhhccCCCCCCCceeeEEEeeCCC-----CcccCCCCC-----ceEecc--hhhHH
Q 020319 93 GTPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-----DTPIGAMPG-----CYRLGW--RHGLV 160 (327)
Q Consensus 93 g~p~~~~~~~~~R~RRlR~~~~lR~l~~Et~Ls~~dLI~PlFV~eg~~-----~~~I~SMPG-----v~r~si--d~~l~ 160 (327)
|.=+|-|=+|.- - +=.++|+.+-|+-++ +=.|+.-=..--.. .+...|=|. -||+.. ..+.+
T Consensus 163 GADiVAPSdMMD----G-rV~aIR~aLd~~G~~-~v~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~~EAl 236 (328)
T 1w1z_A 163 GADFVSPSDMMD----G-RIGAIREALDETDHS-DVGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPANTEEAM 236 (328)
T ss_dssp TCSEEEECSCCT----T-HHHHHHHHHHHTTCT-TSEEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHH
T ss_pred CCCeEecccccc----c-HHHHHHHHHHhCCCC-CceeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCCCHHHHH
Confidence 444555555531 1 225788888887663 23444443332111 234444442 233321 13588
Q ss_pred HHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeec---CCC
Q 020319 161 QEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR---EDG 237 (327)
Q Consensus 161 ~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~---~~G 237 (327)
.|++.-++.|-.-||+=|- .+.-.-|+.+|++| ++-|.+ |.-.|--..+. ++|
T Consensus 237 rE~~~Di~EGAD~vMVKPa-----------------l~YLDIir~vk~~~-~~P~aa------YqVSGEYAMikaAa~~G 292 (328)
T 1w1z_A 237 KEVELDIVEGADIVMVKPG-----------------LAYLDIVWRTKERF-DVPVAI------YHVSGEYAMVKAAAAKG 292 (328)
T ss_dssp HHHHHHHHHTCSEEEEESC-----------------GGGHHHHHHHHHHH-CSCEEE------EECHHHHHHHHHHHHTT
T ss_pred HHHHhhHHhCCCEEEEcCC-----------------CchHHHHHHHHHhc-CCCEEE------EEccHHHHHHHHHHHcC
Confidence 8999999999999998653 34566899999998 666665 99999888774 478
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
-||-++. +.+.-++.-+||||+|
T Consensus 293 wiD~~~~---v~Esl~~~kRAGAd~I 315 (328)
T 1w1z_A 293 WIDEDRV---MMESLLCMKRAGADII 315 (328)
T ss_dssp SSCHHHH---HHHHHHHHHHHTCSEE
T ss_pred CccHHHH---HHHHHHHHHhcCCCEE
Confidence 8886643 3456788999999986
No 153
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=42.69 E-value=1.3e+02 Score=27.36 Aligned_cols=110 Identities=14% Similarity=0.192 Sum_probs=65.9
Q ss_pred EecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcc
Q 020319 152 RLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHD 230 (327)
Q Consensus 152 r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHc 230 (327)
.+-.+ .+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 19 ~iD~~-~l~~lv~~li~~Gv~gl~v~Gt--------tGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv----------- 78 (292)
T 3daq_A 19 KVNLE-ALKAHVNFLLENNAQAIIVNGT--------TAESPTLTTDEKELILKTVIDLVDKRVPVIAGT----------- 78 (292)
T ss_dssp EECHH-HHHHHHHHHHHTTCCEEEESSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-----------
T ss_pred CcCHH-HHHHHHHHHHHcCCCEEEECcc--------ccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC-----------
Confidence 34454 5888888999999999999985 34433322222233444444432 345555511
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCe---ecCCC---CCCchHHHHHHHHHHCCCCCceeeehh
Q 020319 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADV---VSPSD---MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 231 GIl~~~G~IdND~Tv~~Lak~Als~A~AGADi---VAPSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
|...-.+|++ .|-..+++|||- +.|.= --||-+...|...+.. +++||=|-
T Consensus 79 ------g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~---~lPiilYn 135 (292)
T 3daq_A 79 ------GTNDTEKSIQ----ASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAV---KLPVVLYN 135 (292)
T ss_dssp ------CCSCHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH---CSCEEEEE
T ss_pred ------CcccHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 2223345554 444446689984 34431 1378888888888876 57999885
No 154
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=42.57 E-value=52 Score=35.04 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=61.1
Q ss_pred HHHHHHHHHHcCCCeEEEeecC------CC----------CCCCcccccCcCCCCcH---HHHHHHHHHHCCCeeEEeee
Q 020319 159 LVQEVAKARDVGVNSVVLFPKV------PD----------ALKSPTGDEAYNDNGLV---PRTIWLLKDRYPDLVIYTDV 219 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi------~~----------~~KD~~Gs~A~n~~glV---~rAIr~iK~~fPdl~VitDV 219 (327)
+.+.++.+.+.|+..|.++..+ .. +.+...| .+...... -+.|+.+++.+|++-||.
T Consensus 717 ~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~g--g~sg~~~~~~~~~~v~~v~~~~~~ipvi~-- 792 (1025)
T 1gte_A 717 IVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYG--GVSGTAIRPIALRAVTTIARALPGFPILA-- 792 (1025)
T ss_dssp HHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCE--EEESGGGHHHHHHHHHHHHHHSTTCCEEE--
T ss_pred HHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCC--CCCcccchhHHHHHHHHHHHHcCCCCEEE--
Confidence 6777888999999999996321 00 0011111 11111111 368888899888776665
Q ss_pred cccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeec--------CCCCCCchHHHHHHHHHHCCCCCc
Q 020319 220 ALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVS--------PSDMMDGRVGAIRAALDAEGFQHV 288 (327)
Q Consensus 220 cLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVA--------PSDMMDGRV~aIR~aLD~~Gf~~v 288 (327)
.|-|.+=+.+. ..-++|||.|. |-+..+--...++..|+..||.++
T Consensus 793 ----------------~GGI~s~~da~-------~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~~l~~~l~~~G~~~i 846 (1025)
T 1gte_A 793 ----------------TGGIDSAESGL-------QFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIEEL 846 (1025)
T ss_dssp ----------------ESSCCSHHHHH-------HHHHTTCSEEEESHHHHTSCTTHHHHHHHHHHHHHHHTTCGGG
T ss_pred ----------------ecCcCCHHHHH-------HHHHcCCCEEEEeeccccCCccHHHHHHHHHHHHHHHcCCCCH
Confidence 25565544333 33347999874 333344445667888999999544
No 155
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=42.44 E-value=86 Score=28.54 Aligned_cols=109 Identities=21% Similarity=0.206 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+... .+-||+=|
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv----------------- 79 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGT--------TGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV----------------- 79 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESST--------TTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-----------------
Confidence 4778888999999999999995 344332222223455565555543 34444411
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCCC----CCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSDM----MDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSDM----MDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-.+|++ .+-..+++|||-| .|.=- -+|-+...+...++..-.+++||=|-.
T Consensus 80 g~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~ 141 (294)
T 3b4u_A 80 LVDSIEDAAD----QSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNI 141 (294)
T ss_dssp CCSSHHHHHH----HHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred CCccHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEEC
Confidence 2222345544 4444467899965 44321 267888888888765111458888864
No 156
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=42.43 E-value=92 Score=26.37 Aligned_cols=93 Identities=15% Similarity=0.202 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCcc
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVI 239 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~I 239 (327)
.++++++.+.|+..|++=++.+...|. |. . ..-...++.+++.+ ++-|++ .|-|
T Consensus 120 ~~~~~~a~~~gaD~i~~~~~f~~~~~~--g~---~--~~~~~~l~~~~~~~-~~pvia------------------~GGI 173 (221)
T 1yad_A 120 LEEAVQAEKEDADYVLFGHVFETDCKK--GL---E--GRGVSLLSDIKQRI-SIPVIA------------------IGGM 173 (221)
T ss_dssp HHHHHHHHHTTCSEEEEECCC-----------------CHHHHHHHHHHHC-CSCEEE------------------ESSC
T ss_pred HHHHHHHHhCCCCEEEECCccccCCCC--CC---C--CCCHHHHHHHHHhC-CCCEEE------------------ECCC
Confidence 567888899999877663321211121 11 1 22335677777665 333332 2556
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCeecCCC-CC---C--chHHHHHHHHHHCCCC
Q 020319 240 MNDETVHQLCKQAVSQARAGADVVSPSD-MM---D--GRVGAIRAALDAEGFQ 286 (327)
Q Consensus 240 dND~Tv~~Lak~Als~A~AGADiVAPSD-MM---D--GRV~aIR~aLD~~Gf~ 286 (327)
|-+++..+. ++|||.|+=+. .+ | ..+..+++++...+++
T Consensus 174 -~~~nv~~~~-------~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~~~~ 218 (221)
T 1yad_A 174 -TPDRLRDVK-------QAGADGIAVMSGIFSSAEPLEAARRYSRKLKEMRYE 218 (221)
T ss_dssp -CGGGHHHHH-------HTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHHC--
T ss_pred -CHHHHHHHH-------HcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHHhhhc
Confidence 667766443 47999776432 22 2 5677777888777764
No 157
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=42.28 E-value=22 Score=34.43 Aligned_cols=138 Identities=17% Similarity=0.296 Sum_probs=86.3
Q ss_pred CCCcccCCCCCCCCCcCCCChhhHhhhccCCCCCCCceeeEEEeeCCC-----CcccCCCC-C---ceEecc--hhhHHH
Q 020319 93 GTPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-----DTPIGAMP-G---CYRLGW--RHGLVQ 161 (327)
Q Consensus 93 g~p~~~~~~~~~R~RRlR~~~~lR~l~~Et~Ls~~dLI~PlFV~eg~~-----~~~I~SMP-G---v~r~si--d~~l~~ 161 (327)
|.=+|-|-+|.- - +=.++|+.+.|+-.+ +=.|+.-=..--.. .+...|=| | -||+.. ..+.+.
T Consensus 157 GAdiVAPSdMMD----G-rV~aIR~aLd~~G~~-~v~ImsYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlr 230 (323)
T 1l6s_A 157 GADFIAPSAAMD----G-QVQAIRQALDAAGFK-DTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIR 230 (323)
T ss_dssp TCSEEEECSCCT----T-HHHHHHHHHHHTTCT-TCEEBCCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHH
T ss_pred CCCeEecccccc----c-HHHHHHHHHHhCCCC-CceeeehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHH
Confidence 444555555531 1 225788887777663 22333322221110 13333333 2 233321 125888
Q ss_pred HHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeec---CCCc
Q 020319 162 EVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR---EDGV 238 (327)
Q Consensus 162 ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~---~~G~ 238 (327)
|++.-++.|-.-||+=|-.+ .-.-|+.+|++| ++-|.+ |.-.|--..+. ++|-
T Consensus 231 e~~~Di~EGAD~vMVKPal~-----------------YLDIi~~vk~~~-~~P~aa------YqVSGEYAMikaAa~~Gw 286 (323)
T 1l6s_A 231 ESLLDEAQGADCLMVKPAGA-----------------YLDIVRELRERT-ELPIGA------YQVSGEYAMIKFAALAGA 286 (323)
T ss_dssp HHHHHHHTTCSBEEEESCTT-----------------CHHHHHHHHTTC-SSCEEE------EECHHHHHHHHHHHHTTS
T ss_pred HHHhhHHhCCceEEEecCcc-----------------hhHHHHHHHHhc-CCCeEE------EEcCcHHHHHHHHHHcCC
Confidence 88889999999999976533 356899999998 676666 99999888774 4788
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCee
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
||-++. +.+.-++.-+||||+|
T Consensus 287 iD~~~~---vlEsl~~~kRAGAd~I 308 (323)
T 1l6s_A 287 IDEEKV---VLESLGSIKRAGADLI 308 (323)
T ss_dssp SCHHHH---HHHHHHHHHHTTCSEE
T ss_pred ccHHHH---HHHHHHHHHhcCCCEE
Confidence 886643 3456788999999986
No 158
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=42.07 E-value=56 Score=32.68 Aligned_cols=104 Identities=20% Similarity=0.270 Sum_probs=65.9
Q ss_pred cchhhHHHHH-HHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCc------------HHHHHHHHHHHCCCeeEEeeec
Q 020319 154 GWRHGLVQEV-AKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVA 220 (327)
Q Consensus 154 sid~~l~~ev-~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~gl------------V~rAIr~iK~~fPdl~VitDVc 220 (327)
++. ++.+++ ..+.++||++|-|-|+.... ..++..|++-+. +.+.|+++.++ .|-||-|+-
T Consensus 153 ~~~-~i~~~ll~yl~~lGv~~i~l~Pi~~~~---~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~--Gi~VilD~V 226 (617)
T 1m7x_A 153 SYR-ELADQLVPYAKWMGFTHLELLPINEHP---FDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAA--GLNVILDWV 226 (617)
T ss_dssp CHH-HHHHHHHHHHHHTTCSEEEESCCEECS---CGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred CHH-HHHHHHHHHHHHcCCCEEEecccccCC---CCCCCCcccccCCccCccCCCHHHHHHHHHHHHHC--CCEEEEEEe
Confidence 554 677886 88999999999998863221 123334554433 34445555554 799999999
Q ss_pred ccCCCCCCcc-----e--eec-C---CC----------ccccHHHHHHHHHHHHHHHHc-CCCee
Q 020319 221 LDPYSSDGHD-----G--IVR-E---DG----------VIMNDETVHQLCKQAVSQARA-GADVV 263 (327)
Q Consensus 221 Lc~YTshGHc-----G--Il~-~---~G----------~IdND~Tv~~Lak~Als~A~A-GADiV 263 (327)
+......+|. | ... . +| ...|.+..+.|...+.-..+. |+|-+
T Consensus 227 ~NH~~~~~~~~~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gvDGf 291 (617)
T 1m7x_A 227 PGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDAL 291 (617)
T ss_dssp TTSCCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCcccCccchhhhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHhCcCEE
Confidence 8877554441 1 000 0 01 124667888888888888886 98744
No 159
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A
Probab=41.91 E-value=29 Score=33.14 Aligned_cols=40 Identities=30% Similarity=0.451 Sum_probs=30.8
Q ss_pred HHHHHHHHHcCCCeecCCCCCCchH------------------------HHHHHHHHHCCCCCceeee
Q 020319 249 CKQAVSQARAGADVVSPSDMMDGRV------------------------GAIRAALDAEGFQHVSIMS 292 (327)
Q Consensus 249 ak~Als~A~AGADiVAPSDMMDGRV------------------------~aIR~aLD~~Gf~~v~IMS 292 (327)
..||+.-|+|||.+|+| +=||| ..|.+.+++.|| ++.||.
T Consensus 181 ~~Qa~aaa~AGa~~iSp---FVgRi~D~~~~~~g~~~~~~~~~~Gv~~v~~iy~~y~~~~~-~T~v~~ 244 (337)
T 3cwn_A 181 FAQARACAEAGVFLISP---YVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY-ETVVMG 244 (337)
T ss_dssp HHHHHHHHHTTCSEEEE---BSHHHHHHHHHHSSCCCCCGGGCHHHHHHHHHHHHHHHTTC-CCEEEE
T ss_pred HHHHHHHHHcCCcEEEe---echhhhhhhhhccccccccccCcHHHHHHHHHHHHHHHcCC-CcEEEe
Confidence 45999999999999999 55666 356677777777 566664
No 160
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=41.88 E-value=61 Score=30.10 Aligned_cols=80 Identities=20% Similarity=0.211 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCe--eEEeeecccCCCCCCcceeecC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDL--VIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl--~VitDVcLc~YTshGHcGIl~~ 235 (327)
.-+.|++++++.|-..|-+--.+. ..|+ .....+.+-|+.+++...+. -|| + |
T Consensus 112 ~Kv~Ea~~Ai~~GAdEIDmViNig-~lk~-------g~~~~v~~eI~~v~~a~~~~~lKVI----------------l-E 166 (260)
T 3r12_A 112 TKAHEAIFAVESGADEIDMVINVG-MLKA-------KEWEYVYEDIRSVVESVKGKVVKVI----------------I-E 166 (260)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCHH-HHHT-------TCHHHHHHHHHHHHHHTTTSEEEEE----------------C-C
T ss_pred HHHHHHHHHHHcCCCEEEEEeehh-hhcc-------ccHHHHHHHHHHHHHhcCCCcEEEE----------------E-e
Confidence 367889999999999988743222 1232 12246788899999875432 222 2 4
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAPS 266 (327)
.+.+ +|+-+...++.| .+||||+|=-|
T Consensus 167 t~~L-t~eei~~A~~ia---~eaGADfVKTS 193 (260)
T 3r12_A 167 TCYL-DTEEKIAACVIS---KLAGAHFVKTS 193 (260)
T ss_dssp GGGC-CHHHHHHHHHHH---HHTTCSEEECC
T ss_pred CCCC-CHHHHHHHHHHH---HHhCcCEEEcC
Confidence 4444 455455555544 78999999888
No 161
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=41.66 E-value=57 Score=27.90 Aligned_cols=77 Identities=14% Similarity=0.123 Sum_probs=47.7
Q ss_pred HHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHH
Q 020319 166 ARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETV 245 (327)
Q Consensus 166 ~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv 245 (327)
|.++||+.|+|-|+-.+ .-|..+.+...+.-=+++|+.|-|- .++...|+|.+. ..-..+.++
T Consensus 118 L~~~gi~~lvi~G~~T~--------------~CV~~Ta~da~~~Gy~V~vv~Da~a-s~~~~~~~~~~~--a~~~h~~aL 180 (197)
T 4h17_A 118 LQELGHLDLIVCGFMSH--------------SSVSTTVRRAKDYGYRCTLVEDASA-TRDLAFKDGVIP--AAQIHQCEM 180 (197)
T ss_dssp HHHHTCSEEEEEEECTT--------------THHHHHHHHHHHTTCEEEEEEEEEE-CCCEEETTEEEC--HHHHHHHHH
T ss_pred HHhcCCCEEEEEeeCcC--------------HHHHHHHHHHHHCCCEEEEeCcccc-ccCcccccCCCC--HHHHHHHHH
Confidence 45679999999997332 4555555555555458999999875 466566777553 222233333
Q ss_pred HHHHHHHHHHHHcCCCeecCC
Q 020319 246 HQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 246 ~~Lak~Als~A~AGADiVAPS 266 (327)
..| +..+|+|+.=.
T Consensus 181 ~~l-------~~~~a~V~tt~ 194 (197)
T 4h17_A 181 AVM-------ADNFACVAPTA 194 (197)
T ss_dssp HHH-------HHHTCEEECGG
T ss_pred HHH-------HhcceEEeEHH
Confidence 332 33578877543
No 162
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=41.36 E-value=48 Score=31.65 Aligned_cols=99 Identities=8% Similarity=-0.086 Sum_probs=57.9
Q ss_pred hHHHHHHHHH-HcCCCeEEEeecC---------C--CCC-CCcccc-cCcCCCCcHHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKAR-DVGVNSVVLFPKV---------P--DAL-KSPTGD-EAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~-~lGI~sVlLFgvi---------~--~~~-KD~~Gs-~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
+..+.++.+. +.|...|-|-+-= | +.- .|+.|- .--|.--++.+.|+++|++.++-.|..-+..+.
T Consensus 175 ~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~ 254 (379)
T 3aty_A 175 LFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLN 254 (379)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccc
Confidence 4566777888 9999999996520 2 122 466554 222333356777899999987324555444433
Q ss_pred CCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 224 YSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 224 YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
+....|. | .+++...+.+-...++|+|.|.-|.
T Consensus 255 ~~~~~~~------~-----~~~~~~~~la~~l~~~Gvd~i~v~~ 287 (379)
T 3aty_A 255 GVHGMID------S-----NPEALTKHLCKKIEPLSLAYLHYLR 287 (379)
T ss_dssp CGGGCCC------S-----CHHHHHHHHHHHHGGGCCSEEEEEC
T ss_pred ccccCCC------C-----CCHHHHHHHHHHHHHhCCCEEEEcC
Confidence 3211121 1 1344445556667789999887654
No 163
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=41.18 E-value=11 Score=36.25 Aligned_cols=44 Identities=30% Similarity=0.337 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCeecC-----CCC------CC----------chHHHHHHHHHHCCCCCceeeeh
Q 020319 249 CKQAVSQARAGADVVSP-----SDM------MD----------GRVGAIRAALDAEGFQHVSIMSY 293 (327)
Q Consensus 249 ak~Als~A~AGADiVAP-----SDM------MD----------GRV~aIR~aLD~~Gf~~v~IMSY 293 (327)
..||+.-|+|||..|+| .|. .| -.|..|.+.++..|| ++-||.=
T Consensus 165 ~~Qa~~aa~AGa~~ISPFVgRi~D~~~~~~g~~~~~~~~d~Gv~~v~~i~~~y~~~g~-~T~vl~A 229 (334)
T 3hjz_A 165 FCQAVTCANANITLISPFVGRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYFKEKGF-KTEVMGA 229 (334)
T ss_dssp HHHHHHHHHTTCSEECCBHHHHHHHHHHHHCCCCCCGGGCHHHHHHHHHHHHHHHHTC-CCEEEEB
T ss_pred HHHHHHHHHcCCcEEEeeccHHHHHhhhccCCcccccccCcHHHHHHHHHHHHHHcCC-CCEEEEe
Confidence 34999999999999999 110 11 246677778888888 5667753
No 164
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=41.13 E-value=85 Score=29.11 Aligned_cols=106 Identities=22% Similarity=0.219 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 44 ~l~~li~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv----------------- 98 (315)
T 3si9_A 44 AFCNFVEWQITQGINGVSPVGT--------TGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA----------------- 98 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEeCcc--------ccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC-----------------
Confidence 5788888999999999999985 34333322222334455555443 234454411
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .+-..+++|||-| .|.= --+|-+...|...+.. +++||=|-.
T Consensus 99 g~~st~~ai~----la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~---~lPiilYn~ 156 (315)
T 3si9_A 99 GSNSTSEAVE----LAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAI---SIPIIIYNI 156 (315)
T ss_dssp CCSSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred CCCCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcC---CCCEEEEeC
Confidence 2223345554 4445567899964 3331 1378888899888886 679998853
No 165
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=40.91 E-value=1.5e+02 Score=28.27 Aligned_cols=127 Identities=9% Similarity=0.053 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCC---cHHHHHHHHHHHC-CCeeEEeeecccCCCCCC-----
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNG---LVPRTIWLLKDRY-PDLVIYTDVALDPYSSDG----- 228 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~g---lV~rAIr~iK~~f-Pdl~VitDVcLc~YTshG----- 228 (327)
.+.++++++++.|.++|.|+|. +. .+. .+... -..+.|+++++.+ |++-|+.|.. ..||-.-
T Consensus 128 ~~~~~a~~~~~~G~~~iKl~G~-~~--~~~-----~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN-~~~~~~~A~~~~ 198 (405)
T 3rr1_A 128 DVIAGMKALQAGGFDHFKLNGC-EE--MGI-----IDTSRAVDAAVARVAEIRSAFGNTVEFGLDFH-GRVSAPMAKVLI 198 (405)
T ss_dssp HHHHHHHHHHHTTCCEEEEESC-CS--SSC-----BCSHHHHHHHHHHHHHHHHTTGGGSEEEEECC-SCBCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecC-Cc--ccc-----cccchhHHHHHHHHHHHHHHhCCCceEEEECC-CCCCHHHHHHHH
Confidence 6899999999999999999764 21 110 11100 1245678888888 6888888864 2332110
Q ss_pred ----ccee--ecCCCccccHHHHHHHHH----------------HHHHHHH-cCCCeecCCCCCCchHHHHHHHHHHCCC
Q 020319 229 ----HDGI--VREDGVIMNDETVHQLCK----------------QAVSQAR-AGADVVSPSDMMDGRVGAIRAALDAEGF 285 (327)
Q Consensus 229 ----HcGI--l~~~G~IdND~Tv~~Lak----------------~Als~A~-AGADiVAPSDMMDGRV~aIR~aLD~~Gf 285 (327)
-.|+ +.+-=.-+|-+.+..|.+ ++....+ -++|+|.|.=|-=|=|...++..+.+--
T Consensus 199 ~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~ 278 (405)
T 3rr1_A 199 KELEPYRPLFIEEPVLAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEA 278 (405)
T ss_dssp HHHGGGCCSCEECSSCCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCEEECCCCcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHH
Confidence 0011 111000123333333332 3333333 4599999988877777766665554433
Q ss_pred CCceeeeh
Q 020319 286 QHVSIMSY 293 (327)
Q Consensus 286 ~~v~IMSY 293 (327)
.++.+|..
T Consensus 279 ~gi~v~~h 286 (405)
T 3rr1_A 279 YDVALAPH 286 (405)
T ss_dssp TTCEECCB
T ss_pred cCCEEEeC
Confidence 34455443
No 166
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=40.77 E-value=19 Score=32.39 Aligned_cols=45 Identities=22% Similarity=0.273 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCCeecCC-----C-CCCch--HHHHHHHHHHCCCCCceeeehh
Q 020319 249 CKQAVSQARAGADVVSPS-----D-MMDGR--VGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 249 ak~Als~A~AGADiVAPS-----D-MMDGR--V~aIR~aLD~~Gf~~v~IMSYS 294 (327)
..||+.-|+|||++|+|= | =.||. |..|++.++..|| ++-||.=|
T Consensus 114 ~~QA~~aa~AGa~~iSpfvgRidd~g~~G~~~i~~~~~~y~~~~~-~t~il~AS 166 (220)
T 1l6w_A 114 AAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAP-QAKVLAAS 166 (220)
T ss_dssp HHHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHCT-TCEEEEBC
T ss_pred HHHHHHHHHCCCeEEEeccchhhcccccHHHHHHHHHHHHHhcCC-CeEEeecc
Confidence 347999999999999992 1 12443 7788999999997 78888644
No 167
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=40.73 E-value=1.1e+02 Score=28.84 Aligned_cols=120 Identities=16% Similarity=0.193 Sum_probs=75.5
Q ss_pred chhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------Cc---HHHHHHHHHHHCCCeeEEeeeccc
Q 020319 155 WRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GL---VPRTIWLLKDRYPDLVIYTDVALD 222 (327)
Q Consensus 155 id~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------gl---V~rAIr~iK~~fPdl~VitDVcLc 222 (327)
+. ++.+.+..+.++||++|-|=|+.+.. . ...|++- |- ..+.|++++++ .|-||-|+-+.
T Consensus 49 ~~-gi~~~LdyL~~LGv~~I~l~Pi~~~~-~----~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~--Gi~VilD~V~N 120 (475)
T 2z1k_A 49 LW-GVAEKLPYLLDLGVEAIYLNPVFAST-A----NHRYHTVDYFQVDPILGGNEALRHLLEVAHAH--GVRVILDGVFN 120 (475)
T ss_dssp HH-HHHHTHHHHHHHTCCEEEECCCEEES-S----TTCCSEEEEEEECGGGTCHHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred HH-HHHHHhHHHHHcCCCEEEECCCcCCC-C----CCCcCCCCcCccCcccCCHHHHHHHHHHHHHC--CCEEEEEEecc
Confidence 53 68889999999999999998864321 1 1223222 22 34455555554 79999999876
Q ss_pred CCCCCCcce-----------------eecC------------------CC----ccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 223 PYSSDGHDG-----------------IVRE------------------DG----VIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 223 ~YTshGHcG-----------------Il~~------------------~G----~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
+-.. .|-- +..+ .+ ...|.+..+.|.+...-..+.|+|-+
T Consensus 121 H~~~-~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~~~gvDGf 199 (475)
T 2z1k_A 121 HTGR-GFFAFQHLMENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWIRFGVDGW 199 (475)
T ss_dssp BCCT-TSHHHHHHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHHTCCEE
T ss_pred cccC-CCHHHHHHHhcCCCCCCcceeecCCCCCcCCCCCCCccccCCCCCcCccccCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 4221 1110 0000 00 13477888888888888789999865
Q ss_pred ---cCCCCCCc-hHHHHHHHHHHC
Q 020319 264 ---SPSDMMDG-RVGAIRAALDAE 283 (327)
Q Consensus 264 ---APSDMMDG-RV~aIR~aLD~~ 283 (327)
+...|-.. -+..||+++++.
T Consensus 200 R~D~~~~~~~~~~~~~~~~~~~~~ 223 (475)
T 2z1k_A 200 RLDVPNEIPDPTFWREFRQRVKGA 223 (475)
T ss_dssp EESSGGGCCCHHHHHHHHHHHHHH
T ss_pred eecccccCCHHHHHHHHHHHHhhc
Confidence 44444344 788999999874
No 168
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=40.40 E-value=32 Score=31.23 Aligned_cols=77 Identities=21% Similarity=0.257 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCC--ee--EEeeecccCCCCCCcceee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD--LV--IYTDVALDPYSSDGHDGIV 233 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPd--l~--VitDVcLc~YTshGHcGIl 233 (327)
..+.|+++++++|-..|-+--.+. ..|+ .+.+=|+.+++...+ +. ||-..|
T Consensus 89 ~k~~e~~~Av~~GAdEID~vinig-~~~~-----------~v~~ei~~v~~a~~~~g~~lKvIlEt~------------- 143 (234)
T 1n7k_A 89 VKLVEAQTVLEAGATELDVVPHLS-LGPE-----------AVYREVSGIVKLAKSYGAVVKVILEAP------------- 143 (234)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCGG-GCHH-----------HHHHHHHHHHHHHHHTTCEEEEECCGG-------------
T ss_pred HHHHHHHHHHHcCCCEEEEeccch-HHHH-----------HHHHHHHHHHHHHhhcCCeEEEEEecc-------------
Confidence 478999999999999998743322 2332 677788888876432 22 243333
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 234 ~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
.+ +|+-+...++. -+++|||+|=-|-
T Consensus 144 ----~L-~~e~i~~a~ri---a~eaGADfVKTsT 169 (234)
T 1n7k_A 144 ----LW-DDKTLSLLVDS---SRRAGADIVKTST 169 (234)
T ss_dssp ----GS-CHHHHHHHHHH---HHHTTCSEEESCC
T ss_pred ----CC-CHHHHHHHHHH---HHHhCCCEEEeCC
Confidence 33 45545555554 4689999999885
No 169
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=40.23 E-value=51 Score=31.71 Aligned_cols=98 Identities=5% Similarity=-0.030 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeec-----------CCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPK-----------VPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgv-----------i~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTs 226 (327)
...+.++.+.+.|...|-|-+- ..+.-.|+.|-.--|.--++.+.|+++|++.++--|...+....+.
T Consensus 172 ~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~- 250 (402)
T 2hsa_B 172 DYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDH- 250 (402)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCS-
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEecccccc-
Confidence 3556666788999999999652 1223356666443344446778899999999733577777765431
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcC------CCeecCC
Q 020319 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAG------ADVVSPS 266 (327)
Q Consensus 227 hGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AG------ADiVAPS 266 (327)
. |+- ...+++...+.|-.+.++| +|.|.-|
T Consensus 251 ~---g~~-------~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~ 286 (402)
T 2hsa_B 251 L---DAM-------DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVT 286 (402)
T ss_dssp T---TCC-------CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred C---CCC-------CCCCHHHHHHHHHHHHhcCCccCCceEEEEEe
Confidence 1 111 1224455555666677888 8877654
No 170
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=39.72 E-value=1.3e+02 Score=27.85 Aligned_cols=110 Identities=14% Similarity=0.134 Sum_probs=67.5
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcce
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDG 231 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcG 231 (327)
+-.+ .+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 29 iD~~-~l~~lv~~li~~Gv~gl~v~Gt--------TGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------ 87 (318)
T 3qfe_A 29 LDLA-SQERYYAYLARSGLTGLVILGT--------NAEAFLLTREERAQLIATARKAVGPDFPIMAGV------------ 87 (318)
T ss_dssp ECHH-HHHHHHHHHHTTTCSEEEESSG--------GGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC------------
T ss_pred CCHH-HHHHHHHHHHHcCCCEEEeCcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC------------
Confidence 3443 5888888999999999999995 34433322222334555555443 345565511
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCe---ecCCC----C-CCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 232 IVREDGVIMNDETVHQLCKQAVSQARAGADV---VSPSD----M-MDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 232 Il~~~G~IdND~Tv~~Lak~Als~A~AGADi---VAPSD----M-MDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .+-..+++|||- +.|+= + -+|-+...+...+.. +++||=|-.
T Consensus 88 -----g~~~t~~ai~----la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~---~lPiilYn~ 147 (318)
T 3qfe_A 88 -----GAHSTRQVLE----HINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQS---PLPVVIYNF 147 (318)
T ss_dssp -----CCSSHHHHHH----HHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred -----CCCCHHHHHH----HHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhC---CCCEEEEeC
Confidence 2223355554 333445678884 45642 2 368888899888876 579998854
No 171
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=39.68 E-value=22 Score=32.52 Aligned_cols=40 Identities=23% Similarity=0.280 Sum_probs=27.0
Q ss_pred HHHHcCCC-eecCCCCCCchHHHHHHHHHHCCCCCceeeehh
Q 020319 254 SQARAGAD-VVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 254 s~A~AGAD-iVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
..++||+| ++.| |+....+...+++++++|+..+.+|+-+
T Consensus 114 ~~~~aG~dGviv~-Dl~~ee~~~~~~~~~~~gl~~i~liap~ 154 (271)
T 1ujp_A 114 LFKQAGATGVILP-DLPPDEDPGLVRLAQEIGLETVFLLAPT 154 (271)
T ss_dssp HHHHHTCCEEECT-TCCGGGCHHHHHHHHHHTCEEECEECTT
T ss_pred HHHHcCCCEEEec-CCCHHHHHHHHHHHHHcCCceEEEeCCC
Confidence 34667777 6666 5555667777777777777666666654
No 172
>1xrs_A D-lysine 5,6-aminomutase alpha subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.1.19.4
Probab=39.46 E-value=18 Score=36.77 Aligned_cols=62 Identities=35% Similarity=0.499 Sum_probs=42.9
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecC-----CCCCC----c--------------hHHHHHHHHHHCCCC-Cceee
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSP-----SDMMD----G--------------RVGAIRAALDAEGFQ-HVSIM 291 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAP-----SDMMD----G--------------RV~aIR~aLD~~Gf~-~v~IM 291 (327)
.|.|..|- .||..-|.+|||+||= -..+| | .+.++|+|||+.|-+ .-.|.
T Consensus 159 tG~i~eDi------~qa~aAA~~GAD~IaVIRttgQSllDyvp~GaT~eG~GGt~aTqenfR~mRkALD~v~~evgRyI~ 232 (516)
T 1xrs_A 159 TGNIYEDI------TQAVAAAKQGADVIAVIRTTGQSLLDYVPYGATTEGFGGTYATQENFRLMREALDKVGAEVGKYIR 232 (516)
T ss_dssp CSCHHHHH------HHHHHHHHTTCSEEEECCCTTGGGCSSCCCSCCSCCTTSCCCCHHHHHHHHHHHHHHHHHHTSCCE
T ss_pred cCchHHHH------HHHHHHHHcCCCEEEEecccchhhhcccCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHhCCeee
Confidence 47776663 4889999999999973 12333 4 689999999998752 22333
Q ss_pred ehhhhhhccccchh
Q 020319 292 SYTAKYASSFYGPF 305 (327)
Q Consensus 292 SYSAKyASsfYGPF 305 (327)
-.-|+|.+-||=
T Consensus 233 --~~nY~SGlcmPE 244 (516)
T 1xrs_A 233 --LCNYCSGLCMPE 244 (516)
T ss_dssp --EEEECCSTTHHH
T ss_pred --eeccccccccHH
Confidence 234778888874
No 173
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=39.41 E-value=45 Score=31.59 Aligned_cols=60 Identities=18% Similarity=0.355 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------Cc---HHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GL---VPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------gl---V~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
++.+.+.-+.+|||++|-|=|+.+.... ...|+.- |- +.+.|++++++ .|-||-|+-+-.
T Consensus 33 Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~----~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~--Gi~VilD~V~NH 104 (549)
T 4aie_A 33 GIISRLDYLEKLGIDAIWLSPVYQSPGV----DNGYDISDYEAIDPQYGTMADMDELISKAKEH--HIKIVMDLVVNH 104 (549)
T ss_dssp HHHTTHHHHHHHTCSEEEECCCEECCCT----TTTSSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHhhHHHHHCCCCEEEeCCCcCCCCC----CCCcCccCCCCcCcccCCHHHHHHHHHHHHHC--CCEEEEEECccC
Confidence 5777888899999999999887432111 2223322 22 44555555555 799999998754
No 174
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=39.38 E-value=1.1e+02 Score=29.58 Aligned_cols=47 Identities=28% Similarity=0.431 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
...+.++.+++.|+..|.+-.. .|. . ....+.|+.||+.+|++.|+.
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~--------~G~----~-~~~~e~i~~i~~~~p~~pvi~ 283 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTA--------HGH----S-RRVIETLEMIKADYPDLPVVA 283 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCS--------CCS----S-HHHHHHHHHHHHHCTTSCEEE
T ss_pred hHHHHHHHHHHhCCCEEEEEec--------CCc----h-HHHHHHHHHHHHHCCCceEEe
Confidence 4688999999999999887211 110 0 135678999999999877654
No 175
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=39.06 E-value=95 Score=27.43 Aligned_cols=20 Identities=10% Similarity=0.283 Sum_probs=16.8
Q ss_pred HHHHHHHHHHcCCCeEEEee
Q 020319 159 LVQEVAKARDVGVNSVVLFP 178 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFg 178 (327)
+.+.++.+.+.|+..|.+++
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMIN 197 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeC
Confidence 55667888999999999976
No 176
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=39.01 E-value=36 Score=31.69 Aligned_cols=71 Identities=21% Similarity=0.299 Sum_probs=47.9
Q ss_pred ecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCccee
Q 020319 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGI 232 (327)
Q Consensus 153 ~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGI 232 (327)
+.++ -+++++++.+.|...|+|-. +++ .-+.++++.++..||++.|.+
T Consensus 202 vev~--tlee~~~A~~aGaD~I~ld~--------------~~~-~~l~~~v~~l~~~~~~~~I~A--------------- 249 (299)
T 2jbm_A 202 VECS--SLQEAVQAAEAGADLVLLDN--------------FKP-EELHPTATVLKAQFPSVAVEA--------------- 249 (299)
T ss_dssp EEES--SHHHHHHHHHTTCSEEEEES--------------CCH-HHHHHHHHHHHHHCTTSEEEE---------------
T ss_pred EecC--CHHHHHHHHHcCCCEEEECC--------------CCH-HHHHHHHHHhhccCCCeeEEE---------------
Confidence 4554 24889999999998888732 122 245677788888888766554
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 020319 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 233 l~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS 266 (327)
.|-| |-+++. .++++|||.|+=+
T Consensus 250 ---SGGI-t~~ni~-------~~~~aGaD~i~vG 272 (299)
T 2jbm_A 250 ---SGGI-TLDNLP-------QFCGPHIDVISMG 272 (299)
T ss_dssp ---ESSC-CTTTHH-------HHCCTTCCEEECT
T ss_pred ---ECCC-CHHHHH-------HHHHCCCCEEEEC
Confidence 2445 455554 4578999999764
No 177
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=38.77 E-value=28 Score=34.07 Aligned_cols=79 Identities=23% Similarity=0.316 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeec---
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR--- 234 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~--- 234 (327)
+.+.|++.-++-|-.-||+=|- .+.-.-|+.+|++| ++-|.+ |.-.|--..+.
T Consensus 248 EAlrE~~lDi~EGAD~vMVKPa-----------------l~YLDIi~~vk~~~-~~Pvaa------YqVSGEYAMikAAa 303 (356)
T 3obk_A 248 EAEREAEADASEGADMLMVKPG-----------------LPYLDVLAKIREKS-KLPMVA------YHVSGEYAMLKAAA 303 (356)
T ss_dssp HHHHHHHHHHHTTCSEEEEESS-----------------GGGHHHHHHHHHHC-SSCEEE------EECHHHHHHHHHHH
T ss_pred HHHHHHHhhHhcCCCEEEecCC-----------------CcHHHHHHHHHhcC-CCCEEE------EEccHHHHHHHHHH
Confidence 5888999999999999998653 34566899999997 566665 99999888774
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 235 EDGVIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 235 ~~G~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
++|-||-+..+ .+.-++.-+||||+|
T Consensus 304 ~~GwiD~~~~v---~Esl~~~kRAGAd~I 329 (356)
T 3obk_A 304 EKGYISEKDTV---LEVLKSFRRAGADAV 329 (356)
T ss_dssp HHTSSCHHHHH---HHHHHHHHHHTCSEE
T ss_pred HcCCccHHHHH---HHHHHHHHHcCCCEE
Confidence 46888866543 456788999999986
No 178
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=38.75 E-value=60 Score=30.51 Aligned_cols=123 Identities=14% Similarity=0.131 Sum_probs=71.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccc--cCcCCCCc------------HHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGD--EAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs--~A~n~~gl------------V~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
++.+++..+.++|+++|-|=|+.+....+..|. ..|++-.. +.+.|++++++ .|-||.|+-+-.
T Consensus 31 ~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~--Gi~vi~D~V~NH 108 (449)
T 3dhu_A 31 GVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHEL--GMKVMLDIVYNH 108 (449)
T ss_dssp HHHTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSE
T ss_pred HHHHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEccCc
Confidence 688889999999999999988643322222222 22443332 34555555554 799999998754
Q ss_pred CCCC-------------Ccceeec---C--CC----ccccHHHHHHHHHHHHHHHHcCCCee---cCCCCCCchHHHHHH
Q 020319 224 YSSD-------------GHDGIVR---E--DG----VIMNDETVHQLCKQAVSQARAGADVV---SPSDMMDGRVGAIRA 278 (327)
Q Consensus 224 YTsh-------------GHcGIl~---~--~G----~IdND~Tv~~Lak~Als~A~AGADiV---APSDMMDGRV~aIR~ 278 (327)
-... .-+|-.. . ++ ...|.+..+.|.+...-..+. +|-+ +..-|-..-+..||+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~-vDGfRlDaa~~~~~~f~~~~~~ 187 (449)
T 3dhu_A 109 TSPDSVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQF-VDGYRCDVAPLVPLDFWLEARK 187 (449)
T ss_dssp ECTTSHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTT-CSEEEETTGGGSCHHHHHHHHH
T ss_pred CcCccchhhcCccceEECCCCCcCCCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHh-CCEEEEEChhhCCHHHHHHHHH
Confidence 3321 1111110 0 01 124677777777777766665 5532 223333356678888
Q ss_pred HHHHC
Q 020319 279 ALDAE 283 (327)
Q Consensus 279 aLD~~ 283 (327)
.+++.
T Consensus 188 ~~~~~ 192 (449)
T 3dhu_A 188 QVNAK 192 (449)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88654
No 179
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=38.62 E-value=1.4e+02 Score=29.08 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=68.6
Q ss_pred HHHHHHHH-----HHcCCCeEEE----eecCCCCCCCcccccCcCCCCc---HHHHHHHHHHHCCCeeEEeeecccCCCC
Q 020319 159 LVQEVAKA-----RDVGVNSVVL----FPKVPDALKSPTGDEAYNDNGL---VPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (327)
Q Consensus 159 l~~ev~~~-----~~lGI~sVlL----Fgvi~~~~KD~~Gs~A~n~~gl---V~rAIr~iK~~fPdl~VitDVcLc~YTs 226 (327)
+++.++.+ .++|+.-|+| |+ ..+|..|.--.|++-+ +..-+..|+++==.+.|.+|.-- .|-
T Consensus 38 i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~----~~rd~~G~~~~~~~kFP~Gl~~l~~~ih~~Glk~Giw~~~g~--~tC 111 (404)
T 3hg3_A 38 FMEMAELMVSEGWKDAGYEYLCIDDCWMA----PQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGN--KTC 111 (404)
T ss_dssp HHHHHHHHHHTTHHHHTCCEEECCSSCBC----SSCCTTSCCCBCTTTSTTHHHHHHHHHHHTTCEEEEEEESSS--BCT
T ss_pred HHHHHHHHHHCCcHhhCCeEEEECCCcCC----CCCCCCCCeeeChhhcCCCHHHHHHHHHHCCCeeEEEecCCc--ccc
Confidence 44555544 4778887776 32 1366777755554322 34456667777667889988643 333
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-------CCchHHHHHHHHHHCCC
Q 020319 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM-------MDGRVGAIRAALDAEGF 285 (327)
Q Consensus 227 hGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDM-------MDGRV~aIR~aLD~~Gf 285 (327)
.|+-|.+ |..+.| |-.+|+=|.|.|==-.+ +.-|..++|+||.+.|=
T Consensus 112 ~~~pGs~---~~~~~d---------a~~fa~WGvDylK~D~C~~~~~~~~~~~y~~m~~AL~~tGR 165 (404)
T 3hg3_A 112 AGFPGSF---GYYDID---------AQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLALNRTGR 165 (404)
T ss_dssp TSSBCCT---TCHHHH---------HHHHHHHTCCEEEEECCSCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCccH---HHHHHH---------HHHHHHhCCcEEEecCcCCCcchhHHHHHHHHHHHHHhcCC
Confidence 4565544 344444 45789999998742221 44588999999999885
No 180
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=38.52 E-value=57 Score=29.15 Aligned_cols=89 Identities=18% Similarity=0.166 Sum_probs=56.0
Q ss_pred HHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC---------
Q 020319 202 TIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------- 270 (327)
Q Consensus 202 AIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD--------- 270 (327)
..+.|++..|+ ++-++|..-.||-.. ..++-.+++.+.+-.+.++|||.|.=..=-+
T Consensus 18 v~~~i~~~lP~~~~iy~~D~~~~Pyg~~------------s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~~~l~~lr 85 (267)
T 2gzm_A 18 VAKELIRQLPKERIIYLGDTARCPYGPR------------SREEVRQFTWEMTEHLLDLNIKMLVIACNTATAVVLEEMQ 85 (267)
T ss_dssp HHHHHHHHCTTSCEEEEECTTTCCCTTS------------CHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEecCCCCCCCCCC------------CHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHHHHH
Confidence 45888899985 555699998888322 3344455566666666778999775322111
Q ss_pred --------c-hHHHHHHHHHHCCCCCceeeehhhhhhcccc
Q 020319 271 --------G-RVGAIRAALDAEGFQHVSIMSYTAKYASSFY 302 (327)
Q Consensus 271 --------G-RV~aIR~aLD~~Gf~~v~IMSYSAKyASsfY 302 (327)
| ...+++.++...+..+|+||+=..--.|.+|
T Consensus 86 ~~~~iPvigi~ep~~~~A~~~~~~~rIgVlaT~~T~~~~~y 126 (267)
T 2gzm_A 86 KQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIGTVKSGAY 126 (267)
T ss_dssp HHCSSCEEESHHHHHHHHHHHCSSCEEEEEECHHHHHHTHH
T ss_pred HhCCCCEEeecHHHHHHHHHccCCCEEEEEEChHHhccHHH
Confidence 2 3445666666566778888865555556554
No 181
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=38.31 E-value=2.1e+02 Score=28.62 Aligned_cols=121 Identities=12% Similarity=0.059 Sum_probs=59.9
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHH---HHHHH----CCCeeEEe--eecccCCCC---
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIW---LLKDR----YPDLVIYT--DVALDPYSS--- 226 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr---~iK~~----fPdl~Vit--DVcLc~YTs--- 226 (327)
+.+.++++.+.|+-.|-|=--+...+| +|-.+-..==++..++. ++++. -++++|++ |..-..+.+
T Consensus 169 v~~~vk~~~~aGaaGi~iEDq~~~~Kk--CGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~ 246 (439)
T 3i4e_A 169 AFELMKAMIEAGASGVHFEDQLASVKK--CGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDI 246 (439)
T ss_dssp HHHHHHHHHHHTCSEEEEESBCGGGCB--CSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCC
T ss_pred HHHHHHHHHHcCCEEEEEeCCCCCccc--cCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCccccccccccc
Confidence 677888999999999988433211122 33322222223344443 33332 36788875 442211100
Q ss_pred C--Ccceee---cCCCccccHHHHHHHHHHHHHHHHcCCCeecC-CCCCC-chHHHHHHHHHH
Q 020319 227 D--GHDGIV---REDGVIMNDETVHQLCKQAVSQARAGADVVSP-SDMMD-GRVGAIRAALDA 282 (327)
Q Consensus 227 h--GHcGIl---~~~G~IdND~Tv~~Lak~Als~A~AGADiVAP-SDMMD-GRV~aIR~aLD~ 282 (327)
+ -|-=|+ ..+|......-++.-.+-|..|++ |||+|=+ +..-| ..|.++.++++.
T Consensus 247 d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~ 308 (439)
T 3i4e_A 247 DDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHK 308 (439)
T ss_dssp CTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred ccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcc
Confidence 0 111111 111211111223444446678888 9999966 43434 456777777764
No 182
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=38.08 E-value=1.9e+02 Score=27.65 Aligned_cols=137 Identities=15% Similarity=0.146 Sum_probs=75.5
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEe-ecCCCCCCCcccc----cCcCCC----------------CcHHHHHHHHHHHC-C
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLF-PKVPDALKSPTGD----EAYNDN----------------GLVPRTIWLLKDRY-P 211 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLF-gvi~~~~KD~~Gs----~A~n~~----------------glV~rAIr~iK~~f-P 211 (327)
+.+ ++.++++++++.|.+++.|= |. +. .....|. ..++++ .-..+-|++|++++ |
T Consensus 150 ~~e-~~~~~a~~~~~~Gf~~iKlKvg~-~~-~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G~ 226 (425)
T 3vcn_A 150 TIE-DTIAEAVKYKAMGYKAIRLQTGV-PG-LASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLGW 226 (425)
T ss_dssp SHH-HHHHHHHHHHHTTCSEEEEEECC-TT-CSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHCS
T ss_pred CHH-HHHHHHHHHHHcCCCEEEEeecC-cc-ccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcCC
Confidence 444 68899999999999999983 31 10 0111110 001111 12355788999998 6
Q ss_pred CeeEEeeecccCCCCCC---------cce--eecCCCccccHHHHHHHHH----------------HHHHHHHcC-CCee
Q 020319 212 DLVIYTDVALDPYSSDG---------HDG--IVREDGVIMNDETVHQLCK----------------QAVSQARAG-ADVV 263 (327)
Q Consensus 212 dl~VitDVcLc~YTshG---------HcG--Il~~~G~IdND~Tv~~Lak----------------~Als~A~AG-ADiV 263 (327)
++-|+.|.. +.||..- ..| .+.+-=.-+|-+.+..|.+ ++....+.| +|+|
T Consensus 227 d~~l~vDaN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v 305 (425)
T 3vcn_A 227 DVHLLHDVH-HRLTPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQHTTTPLAVGEIFAHVWDAKQLIEEQLIDYL 305 (425)
T ss_dssp SSEEEEECT-TCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEE
T ss_pred CCEEEEECC-CCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCeE
Confidence 899999975 3343210 001 1111101124444555544 333445555 8999
Q ss_pred cCCCCCCchHHHHHHHHHHCCCCCceeeehh
Q 020319 264 SPSDMMDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 264 APSDMMDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
.|-=|-=|=|...++..+.+--.++.+|.++
T Consensus 306 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 336 (425)
T 3vcn_A 306 RATVLHAGGITNLKKIAAFADLHHVKTGCHG 336 (425)
T ss_dssp CCCTTTTTHHHHHHHHHHHHGGGTCEECCCC
T ss_pred ecChhhcCCHHHHHHHHHHHHHcCCEEeecc
Confidence 9988887877776666654433344554443
No 183
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=38.06 E-value=53 Score=32.66 Aligned_cols=60 Identities=13% Similarity=0.248 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCc------------HHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~gl------------V~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
++.+.+.-+.++||++|-|=|+.+.. .....|++-.. +.+.|++++++ .|-||-|+-+-+
T Consensus 41 gi~~~Ldyl~~LGv~~i~l~Pi~~~~----~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~--Gi~VilD~V~NH 112 (589)
T 3aj7_A 41 GIASKLEYIKELGADAIWISPFYDSP----QDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKL--GMKFITDLVINH 112 (589)
T ss_dssp HHHHTHHHHHHHTCSEEEECCCEECC----CTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHHHcCCCEEEECCcccCC----CCCCCcCcccccccccccCCHHHHHHHHHHHHHC--CCEEEEEecccc
Confidence 67888899999999999998864321 12233443332 44555555554 799999998765
No 184
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=37.99 E-value=1.1e+02 Score=28.24 Aligned_cols=108 Identities=17% Similarity=0.105 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+....+-||+=| |
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv-----------------g 84 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGI--------LGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV-----------------S 84 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTG--------GGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC-----------------C
T ss_pred HHHHHHHHHHHCCCCEEEeCcc--------CcChhhCCHHHHHHHHHHHHHHcCCCcEEEec-----------------C
Confidence 5788888999999999999985 34443322223345666666555556666521 2
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee---cCCCC--CCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVV---SPSDM--MDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiV---APSDM--MDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
...-.+|++ .|-..+++|||-| .|.-- -+|-+...|...+..+ .+++||=|-.
T Consensus 85 ~~~t~~ai~----la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~-~~lPiilYn~ 142 (313)
T 3dz1_A 85 APGFAAMRR----LARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIG-DDVPWVLQDY 142 (313)
T ss_dssp CSSHHHHHH----HHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHC-TTSCEEEEEC
T ss_pred CCCHHHHHH----HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCC-CCCcEEEEeC
Confidence 233455655 3344466788854 45421 2677888888887764 1268888853
No 185
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=37.52 E-value=55 Score=32.21 Aligned_cols=60 Identities=15% Similarity=0.391 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCC---------c---HHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNG---------L---VPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~g---------l---V~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
++.+.+..+.++||++|-|=|+.+... ....|+.-. - +.+.|++++++ .|-||-|+-+-+
T Consensus 46 gi~~~LdyL~~LGv~~I~l~Pi~~~~~----~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~--Gi~VilD~V~NH 117 (570)
T 1m53_A 46 GIIEKLDYLKSLGIDAIWINPHYDSPN----TDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKR--NMRLMIDVVINH 117 (570)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEECCC----TTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHHHcCCCEEEECCcccCCC----CCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccc
Confidence 578888899999999999988643211 123344332 2 34445555554 799999998854
No 186
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=37.51 E-value=47 Score=29.78 Aligned_cols=85 Identities=14% Similarity=0.088 Sum_probs=56.4
Q ss_pred cCCCCcHHHHHHHHHHHCCCeeEEeeeccc----CCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC--
Q 020319 193 YNDNGLVPRTIWLLKDRYPDLVIYTDVALD----PYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS-- 266 (327)
Q Consensus 193 ~n~~glV~rAIr~iK~~fPdl~VitDVcLc----~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS-- 266 (327)
-|++.+..+|+++|++. |+++..|--+. ++-.. ++=++. ....+.+..++..+.++++|-+|+=-+
T Consensus 14 G~~~lLT~~A~~~L~~A--dvV~~~~~~~~~~ll~~~~~-~~~~~~-----~~~~~~~~~~~~i~~~~~~G~~Va~L~~G 85 (264)
T 3ndc_A 14 GAADLITIRGRDLIASC--PVCLYAGSLVPEALLAHCPP-GAKIVN-----TAPMSLDAIIDTIAEAHAAGQDVARLHSG 85 (264)
T ss_dssp SCGGGSBHHHHHHHHHC--SEEEECSTTSCGGGGGGSCT-TCEEEE-----CTTSCHHHHHHHHHHHHHHTCCEEEEESB
T ss_pred CChHHHHHHHHHHHHcC--CEEEEECCCCCHHHHhhcCC-CCEEEe-----cCCCCHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 57889999999999998 77777653221 11110 112221 112345667778888999998876443
Q ss_pred -CCCCchHHHHHHHHHHCCC
Q 020319 267 -DMMDGRVGAIRAALDAEGF 285 (327)
Q Consensus 267 -DMMDGRV~aIR~aLD~~Gf 285 (327)
=+.=|+...+.+.|.++|+
T Consensus 86 DP~iyg~~~~l~~~l~~~gi 105 (264)
T 3ndc_A 86 DLSIWSAMGEQLRRLRALNI 105 (264)
T ss_dssp CTTSSCSHHHHHHHHHHTTC
T ss_pred CCccccHHHHHHHHHHhCCC
Confidence 2445888999999999987
No 187
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=37.16 E-value=2e+02 Score=26.50 Aligned_cols=106 Identities=12% Similarity=0.137 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv----------------- 83 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGT--------TAESPTLTHDEELELFAAVQKVVNGRVPLIAGV----------------- 83 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESST--------TTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-----------------
Confidence 5888888999999999999995 34333322223345666666664 345555521
Q ss_pred CccccHHHHHHHHHHHHHHHHcCC-C---eecCCC---CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGA-D---VVSPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGA-D---iVAPSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .+-..+++|| | ++.|.= --+|-+...|...+.. +++||=|-.
T Consensus 84 g~~~t~~ai~----la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn~ 142 (311)
T 3h5d_A 84 GTNDTRDSIE----FVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADAS---DLPIIIYNI 142 (311)
T ss_dssp CCSSHHHHHH----HHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSC---SSCEEEEEC
T ss_pred CCcCHHHHHH----HHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEec
Confidence 2222344444 4444456787 7 445532 1278888888888765 679998853
No 188
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=36.77 E-value=67 Score=30.19 Aligned_cols=59 Identities=20% Similarity=0.349 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------Cc---HHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GL---VPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------gl---V~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
++.+.+..+.++||++|-|=|+.+.. +...|++- |- +.+.|++++++ .|-||-|+-+..
T Consensus 24 gi~~~LdyL~~LGv~~I~L~Pi~~~~-----~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~--Gi~VilD~V~NH 94 (441)
T 1lwj_A 24 GLKNAVSYLKELGIDFVWLMPVFSSI-----SFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDS--GIKVVLDLPIHH 94 (441)
T ss_dssp HHHHTHHHHHHTTCCEEEECCCEECS-----SSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECTTB
T ss_pred HHHHhhHHHHHcCCCEEEeCCCcCCC-----CCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEeCCCc
Confidence 68888999999999999998864321 12233332 22 44455555554 799999998754
No 189
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=36.75 E-value=66 Score=32.09 Aligned_cols=92 Identities=17% Similarity=0.236 Sum_probs=56.3
Q ss_pred HHHHHHHHHHcCCCeEEEeec-----------CCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCCC
Q 020319 159 LVQEVAKARDVGVNSVVLFPK-----------VPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSS 226 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgv-----------i~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YTs 226 (327)
..+.++.+.+.|...|-|.+- ..+.-.|+.|..--|.--++.+.|+++|++.+ +..|+.=+....|.
T Consensus 143 ~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~- 221 (671)
T 1ps9_A 143 FARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV- 221 (671)
T ss_dssp HHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS-
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC-
Confidence 555566778999999999642 11234566665433444567788999999985 67776544443332
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeec
Q 020319 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVS 264 (327)
Q Consensus 227 hGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVA 264 (327)
|. | .+-++ ..+.|-...++|+|.|.
T Consensus 222 --~~------g-~~~~~----~~~~a~~l~~~g~d~i~ 246 (671)
T 1ps9_A 222 --ED------G-GTFAE----TVELAQAIEAAGATIIN 246 (671)
T ss_dssp --TT------C-CCHHH----HHHHHHHHHHHTCSEEE
T ss_pred --CC------C-CCHHH----HHHHHHHHHhcCCCEEE
Confidence 11 2 12222 33445556789999995
No 190
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=36.69 E-value=38 Score=30.81 Aligned_cols=141 Identities=16% Similarity=0.158 Sum_probs=74.5
Q ss_pred CCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcC-CCCcHHHHHHHHHHHCCCeeEEeeecc-----
Q 020319 148 PGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYN-DNGLVPRTIWLLKDRYPDLVIYTDVAL----- 221 (327)
Q Consensus 148 PGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n-~~glV~rAIr~iK~~fPdl~VitDVcL----- 221 (327)
+.-|+++.+ +++++++++.+.|++.|.|.+-- ++. +. +..-+.+.++.||+.++ +-|.+..-+
T Consensus 86 ~~~~~ls~e-ei~~~~~~~~~~G~~~i~l~gGe-----~p~----~~~~~~~~~~l~~~ik~~~~-i~i~~s~g~~~~e~ 154 (350)
T 3t7v_A 86 INRYRLTME-EIKETCKTLKGAGFHMVDLTMGE-----DPY----YYEDPNRFVELVQIVKEELG-LPIMISPGLMDNAT 154 (350)
T ss_dssp CCCCBCCHH-HHHHHHHHHTTSCCSEEEEEECC-----CHH----HHHSTHHHHHHHHHHHHHHC-SCEEEECSSCCHHH
T ss_pred CCceeCCHH-HHHHHHHHHHHCCCCEEEEeeCC-----CCc----cccCHHHHHHHHHHHHhhcC-ceEEEeCCCCCHHH
Confidence 345667886 79999999999999999886531 111 11 22346889999998875 444321110
Q ss_pred -cCCCCCCcceeecCCCccccHHHHHHHHH--------HHHH-HHHcCCCeecCCCCCCch------HHHHHHHHHHCCC
Q 020319 222 -DPYSSDGHDGIVREDGVIMNDETVHQLCK--------QAVS-QARAGADVVSPSDMMDGR------VGAIRAALDAEGF 285 (327)
Q Consensus 222 -c~YTshGHcGIl~~~G~IdND~Tv~~Lak--------~Als-~A~AGADiVAPSDMMDGR------V~aIR~aLD~~Gf 285 (327)
...-..|-+.+.- +=..-||+..+.+.+ .++. ..++|-.+-+ +||=|- +...=+.|.+.+.
T Consensus 155 l~~L~~aG~~~i~i-~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~--~~i~Glget~e~~~~~l~~l~~l~~ 231 (350)
T 3t7v_A 155 LLKAREKGANFLAL-YQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVED--GILTGVGNDIESTILSLRGMSTNDP 231 (350)
T ss_dssp HHHHHHTTEEEEEC-CCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEE--EEEESSSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCEEEE-eeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEcc--ceEeecCCCHHHHHHHHHHHHhCCC
Confidence 0011123222220 011224555444421 2233 3357776443 666552 2222234456677
Q ss_pred CCceeeehhhhhhcccc
Q 020319 286 QHVSIMSYTAKYASSFY 302 (327)
Q Consensus 286 ~~v~IMSYSAKyASsfY 302 (327)
..+.|..|.-.--+.||
T Consensus 232 ~~v~~~~f~p~~gT~l~ 248 (350)
T 3t7v_A 232 DMVRVMTFLPQEGTPLE 248 (350)
T ss_dssp SEEEEEECCCCTTSTTT
T ss_pred CEEEecceeeCCCCcCc
Confidence 77888877754444444
No 191
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=36.68 E-value=49 Score=32.32 Aligned_cols=71 Identities=20% Similarity=0.373 Sum_probs=0.0
Q ss_pred cchhhHHHHHHHHHHcCCCeEEE------eecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCC
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVL------FPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSD 227 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlL------Fgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTsh 227 (327)
+++ ++...++-+.+.|.+.|+| ||. |.+.-|- ++|..||+.||++.|. |.+|
T Consensus 169 Tl~-Ei~~Ave~i~~~Gn~~iiLlhc~s~YPt-p~~~~nL-------------~aI~~Lk~~f~~lpVG-------~SdH 226 (385)
T 1vli_A 169 EIS-DVHEAWRTIRAEGNNQIAIMHCVAKYPA-PPEYSNL-------------SVIPMLAAAFPEAVIG-------FSDH 226 (385)
T ss_dssp CHH-HHHHHHHHHHTTTCCCEEEEEECSSSSC-CGGGCCT-------------THHHHHHHHSTTSEEE-------EEEC
T ss_pred CHH-HHHHHHHHHHHCCCCcEEEEeccCCCCC-ChhhcCH-------------HHHHHHHHHcCCCCEE-------eCCC
Q ss_pred CcceeecCCCccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 228 GHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 228 GHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
..|. ..+++.-..+|||||
T Consensus 227 -------t~G~----------~~~~~AAvAlGA~iI 245 (385)
T 1vli_A 227 -------SEHP----------TEAPCAAVRLGAKLI 245 (385)
T ss_dssp -------CSSS----------SHHHHHHHHTTCSEE
T ss_pred -------CCCc----------hHHHHHHHHcCCCEE
No 192
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=36.62 E-value=50 Score=32.30 Aligned_cols=101 Identities=18% Similarity=0.203 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------CcHHHHHHHHHHHC-CCeeEEeeecccCCCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GLVPRTIWLLKDRY-PDLVIYTDVALDPYSSD 227 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------glV~rAIr~iK~~f-Pdl~VitDVcLc~YTsh 227 (327)
++.+.+..+.++||++|-|=|+.+.... ...|+.- |-...--+++++.. =.|-||-|+-+-.- +.
T Consensus 32 gi~~~Ldyl~~LGv~~I~l~Pi~~~~~~----~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~-s~ 106 (543)
T 2zic_A 32 GITSKLDYLQKLGVMAIWLSPVYDSPMD----DNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHT-SD 106 (543)
T ss_dssp HHHHTHHHHHHHTCSEEEECCCEECCCT----TTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECCSBC-CT
T ss_pred HHHHHHHHHHHcCCCEEEECCcccCCCC----CCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecCcc-cc
Confidence 6788889999999999999886432111 2233332 23333333333333 27999999988543 22
Q ss_pred Ccc----------------eeecC--C---------------------------C----ccccHHHHHHHHHHHHHHHHc
Q 020319 228 GHD----------------GIVRE--D---------------------------G----VIMNDETVHQLCKQAVSQARA 258 (327)
Q Consensus 228 GHc----------------GIl~~--~---------------------------G----~IdND~Tv~~Lak~Als~A~A 258 (327)
.|- -+..+ + + ...|.+..+.|.+.+.-..+.
T Consensus 107 ~~~~f~~~~~~~~~~y~d~y~~~~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~~pdLN~~np~Vr~~i~~~~~~Wl~~ 186 (543)
T 2zic_A 107 EHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFWIDK 186 (543)
T ss_dssp TSHHHHHHHHCTTSGGGGGBCEESSCCSCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHHHHHHHHHTT
T ss_pred cchhhHhhhcCCCCCCcceeecCCCCCcccccCCCCCCcccCCCCcEEECcccCCCCccCcCCHHHHHHHHHHHHHHHhc
Confidence 221 00100 0 0 125778888899999989999
Q ss_pred CCCee
Q 020319 259 GADVV 263 (327)
Q Consensus 259 GADiV 263 (327)
|+|-+
T Consensus 187 GvDGf 191 (543)
T 2zic_A 187 GIGGF 191 (543)
T ss_dssp TCCEE
T ss_pred CCCEE
Confidence 99865
No 193
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=36.55 E-value=1.5e+02 Score=27.21 Aligned_cols=106 Identities=11% Similarity=0.077 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~Gt--------TGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv----------------- 84 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILAN--------FSEQFAITDDERDVLTRTILEHVAGRVPVIVTT----------------- 84 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec-----------------
Confidence 4788888999999999999985 34443322222334555555443 345555511
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC------CCCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD------MMDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV---APSD------MMDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .+-..+++|||-| .|.- --+|-+...+...+.. +++||=|-.
T Consensus 85 g~~~t~~ai~----la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~---~lPiilYn~ 145 (309)
T 3fkr_A 85 SHYSTQVCAA----RSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAI---AIPIMVQDA 145 (309)
T ss_dssp CCSSHHHHHH----HHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred CCchHHHHHH----HHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 2334455654 3334467899954 5542 1378888888888876 578988864
No 194
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=36.53 E-value=26 Score=28.44 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCeecCCCCCCchHH---HHHHHHHHCCCCCceee
Q 020319 242 DETVHQLCKQAVSQARAGADVVSPSDMMDGRVG---AIRAALDAEGFQHVSIM 291 (327)
Q Consensus 242 D~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~---aIR~aLD~~Gf~~v~IM 291 (327)
+.+.+.+++.|..+ ++|+|+=|.+|.-... .+.+.|.++|..++.||
T Consensus 40 ~~p~e~~v~~a~~~---~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~ 89 (137)
T 1ccw_A 40 LSPQELFIKAAIET---KADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLY 89 (137)
T ss_dssp EECHHHHHHHHHHH---TCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEE
T ss_pred CCCHHHHHHHHHhc---CCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEE
Confidence 66777777777654 9999999999986654 45677888898777765
No 195
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=36.18 E-value=73 Score=29.76 Aligned_cols=93 Identities=18% Similarity=0.203 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCC--CCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPD--ALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~--~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~ 235 (327)
.+.+-++.+.+.|...|-|-.--|. ..+|..|+.-.+.--++.+.|+++++.. ++-|..=+-+
T Consensus 71 ~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~-------------- 135 (350)
T 3b0p_A 71 SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRL-------------- 135 (350)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEES--------------
T ss_pred HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEec--------------
Confidence 5777778888999999998532232 2357778877777778999999999886 3333321111
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
| +++..+.+.+.+.|-...++|+|.|.=++
T Consensus 136 -g-~~~~~~~~~~~~~a~~l~~aG~d~I~V~~ 165 (350)
T 3b0p_A 136 -G-LEGKETYRGLAQSVEAMAEAGVKVFVVHA 165 (350)
T ss_dssp -C-BTTCCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred -C-cCccccHHHHHHHHHHHHHcCCCEEEEec
Confidence 1 11122344455566677799999987665
No 196
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=35.93 E-value=1.2e+02 Score=28.64 Aligned_cols=106 Identities=16% Similarity=0.175 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++. ..-..+-||+= -|
T Consensus 48 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~eEr~~vi~~--~~~grvpViaG-----------------vg 100 (344)
T 2hmc_A 48 ALVRKGKELIADGMSAVVYCGS--------MGDWPLLTDEQRMEGVER--LVKAGIPVIVG-----------------TG 100 (344)
T ss_dssp HHHHHHHHHHHTTCCCEEESSG--------GGTGGGSCHHHHHHHHHH--HHHTTCCEEEE-----------------CC
T ss_pred HHHHHHHHHHHcCCCEEEeCcc--------CcChhhCCHHHHHHHHHH--HhCCCCcEEEe-----------------cC
Confidence 4778888899999999999985 344332111112223332 11123334431 12
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee---cCCC----CCCchHHHHHHHHHHCCCCCceeeehhhh
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVV---SPSD----MMDGRVGAIRAALDAEGFQHVSIMSYTAK 296 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiV---APSD----MMDGRV~aIR~aLD~~Gf~~v~IMSYSAK 296 (327)
...-+++++ .|-..+++|||-| .|.- --||-+...|...++ -.+++||=|-.-
T Consensus 101 ~~st~eai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~a--a~~lPiilYn~P 160 (344)
T 2hmc_A 101 AVNTASAVA----HAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSA--APEIPAVIYNSP 160 (344)
T ss_dssp CSSHHHHHH----HHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHH--STTSCEEEEEBG
T ss_pred CCCHHHHHH----HHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhh--CCCCcEEEEecC
Confidence 223345554 3444467899965 4432 236788888888773 236799988654
No 197
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=35.76 E-value=34 Score=34.22 Aligned_cols=14 Identities=7% Similarity=-0.109 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHCCC
Q 020319 199 VPRTIWLLKDRYPD 212 (327)
Q Consensus 199 V~rAIr~iK~~fPd 212 (327)
...|++..++.||+
T Consensus 214 ~~~A~~~~~~~~p~ 227 (494)
T 2f7f_A 214 DYEAFMAYAKTHRD 227 (494)
T ss_dssp HHHHHHHHHHHCSE
T ss_pred HHHHHHHHHHHCCC
Confidence 67899999999998
No 198
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=35.42 E-value=48 Score=31.52 Aligned_cols=78 Identities=12% Similarity=0.188 Sum_probs=53.1
Q ss_pred eEEEeeCCC-CcccCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCc-ccccCcCCCCcHHHHHHHHHHH
Q 020319 132 PLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSP-TGDEAYNDNGLVPRTIWLLKDR 209 (327)
Q Consensus 132 PlFV~eg~~-~~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~-~Gs~A~n~~glV~rAIr~iK~~ 209 (327)
|++|+--.+ ...-+++.--.=++.+ ++.+++.++.+.|-.-|=|... |+ +|....|+ ....+++..||++
T Consensus 23 kviIt~A~tGa~~t~~~~P~lPvTpe-EIa~~A~~a~~AGAaivHlHvR------d~~~G~ps~d~-~~y~e~~~~IR~~ 94 (316)
T 3c6c_A 23 KVILTCAVTGNAPFNPKHPSMPITPA-QIADACVEAAKAGASVAHIHVR------DPKTGGGSRDP-VLFKEVVDRVRSS 94 (316)
T ss_dssp EECEEEECCCSSCCCTTSTTCCCSHH-HHHHHHHHHHHHTCSEEEECEE------CTTTCCEECCH-HHHHHHHHHHHTT
T ss_pred CeEEEEecCCCcCCccCCCCCCCCHH-HHHHHHHHHHHcCCcEEEEeec------CCCCCCcCCCH-HHHHHHHHHHHHH
Confidence 677764432 2222222111124665 7999999999999998888764 32 57666655 4788899999998
Q ss_pred CCCeeEEe
Q 020319 210 YPDLVIYT 217 (327)
Q Consensus 210 fPdl~Vit 217 (327)
.||++|-.
T Consensus 95 ~~d~ii~~ 102 (316)
T 3c6c_A 95 GTDIVLNL 102 (316)
T ss_dssp TCCCEEEE
T ss_pred CCCeEEEe
Confidence 89988754
No 199
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=35.22 E-value=54 Score=29.33 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=24.1
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee----cCCC-CCCchHH
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVV----SPSD-MMDGRVG 274 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiV----APSD-MMDGRV~ 274 (327)
|..+.+.|++ .+..+.++|||+| --|| |+||-+-
T Consensus 26 g~p~~~~~~~----~~~~l~~~G~D~IElG~P~sdP~adgp~i 64 (262)
T 2ekc_A 26 GYPDYETSLK----AFKEVLKNGTDILEIGFPFSDPVADGPTI 64 (262)
T ss_dssp TSSCHHHHHH----HHHHHHHTTCSEEEEECCCSCCTTSCHHH
T ss_pred CCCChHHHHH----HHHHHHHcCCCEEEECCCCCCcccccHHH
Confidence 5555566654 6778899999995 4455 7899754
No 200
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=35.17 E-value=1.1e+02 Score=30.86 Aligned_cols=152 Identities=14% Similarity=0.133 Sum_probs=91.0
Q ss_pred EEEeeCCCCccc--CCCCCceE-ecc-hhhHHHHHH-HHHHcCCCeEEE--eecCCCCCCCcccccCcCCCCcHHHHHHH
Q 020319 133 LFIHEGEEDTPI--GAMPGCYR-LGW-RHGLVQEVA-KARDVGVNSVVL--FPKVPDALKSPTGDEAYNDNGLVPRTIWL 205 (327)
Q Consensus 133 lFV~eg~~~~~I--~SMPGv~r-~si-d~~l~~ev~-~~~~lGI~sVlL--Fgvi~~~~KD~~Gs~A~n~~glV~rAIr~ 205 (327)
++|.||---+.+ ..+++..- |++ +.++++++. +-++.|-.-+.- |+..+..++ ..|-+ ..-.-+..+|+++
T Consensus 15 ililDGamGT~L~~~g~~~~~el~~l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~-~~g~~-~~~~el~~~av~l 92 (566)
T 1q7z_A 15 VLLLDGAYGTEFMKYGYDDLPEELNIKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLR-KHGLE-DKLDPIVRNAVRI 92 (566)
T ss_dssp CEECCCCSHHHHHHTTCCSCGGGHHHHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHG-GGTCG-GGHHHHHHHHHHH
T ss_pred eEEEEChHHHHHHHCCCCCCchhhcccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHH-hcCch-HHHHHHHHHHHHH
Confidence 678888632211 23454322 222 123566665 577899873332 443222122 12221 1112378889999
Q ss_pred HHHHCC-CeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHHHC
Q 020319 206 LKDRYP-DLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALDAE 283 (327)
Q Consensus 206 iK~~fP-dl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD~~ 283 (327)
.|+.-. . +|..+ +-||... +...|.+.-|+-.+...+|+-.++++|+|++.=--|.| -...++..++.+.
T Consensus 93 Ar~a~~~~-~VAGs--iGP~g~~-----~~~~~~~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~ 164 (566)
T 1q7z_A 93 ARRAAGEK-LVFGD--IGPTGEL-----PYPLGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREV 164 (566)
T ss_dssp HHHHHTTS-EEEEE--ECCCSCC-----BTTTSSBCHHHHHHHHHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHhCC-eEEEe--CCCcccC-----CCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHh
Confidence 997643 3 56665 4577763 22345677788899999999999999999999999988 4466666777654
Q ss_pred CCCCcee-eehhh
Q 020319 284 GFQHVSI-MSYTA 295 (327)
Q Consensus 284 Gf~~v~I-MSYSA 295 (327)
|.++++ +|.+.
T Consensus 165 -~~~~Pv~vS~t~ 176 (566)
T 1q7z_A 165 -SRDVFLIAHMTF 176 (566)
T ss_dssp -CSSSCEEEEECC
T ss_pred -CCCCcEEEEEEE
Confidence 334444 45543
No 201
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=34.90 E-value=96 Score=32.00 Aligned_cols=107 Identities=14% Similarity=0.169 Sum_probs=64.1
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCC------C---CcccccCcCCCCc-------------------HHHHHHH
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDAL------K---SPTGDEAYNDNGL-------------------VPRTIWL 205 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~------K---D~~Gs~A~n~~gl-------------------V~rAIr~ 205 (327)
.+. ++.+.+..|.++||++|-|-|+.+... | ...++..|++-+. +.+.|++
T Consensus 203 t~~-gl~~~l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~ 281 (750)
T 1bf2_A 203 TYY-GAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQA 281 (750)
T ss_dssp SHH-HHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHH
T ss_pred CHH-HHHHHHHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcccccccCccccCCCCCccHHHHHHHHHHH
Confidence 454 688889999999999999988643211 1 0112223432221 3333444
Q ss_pred HHHHCCCeeEEeeecccCCCCCCcce-------------------ee--cCC--------C-----ccccHHHHHHHHHH
Q 020319 206 LKDRYPDLVIYTDVALDPYSSDGHDG-------------------IV--RED--------G-----VIMNDETVHQLCKQ 251 (327)
Q Consensus 206 iK~~fPdl~VitDVcLc~YTshGHcG-------------------Il--~~~--------G-----~IdND~Tv~~Lak~ 251 (327)
++++ .|-||-||-+......++.| .. ..+ | ...|.+..+.|...
T Consensus 282 ~H~~--Gi~VilDvV~NH~~~~~~~~~~d~~~~p~~~~~~~d~~~~y~~~~~~~~~~~~~g~~~~ln~~~p~V~~~i~d~ 359 (750)
T 1bf2_A 282 FHNA--GIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDS 359 (750)
T ss_dssp HHHT--TCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHHHHHHHHHBCBCTTSSSBCCSSSSSCCBCTTSHHHHHHHHHH
T ss_pred HHHC--CCEEEEEEecccccCcccccccccccCCCcccccCCCCcceEECCCCCceecCCCcCCccccCCHHHHHHHHHH
Confidence 4444 79999999987655444333 00 000 1 12466778888888
Q ss_pred HHHHHH-cCCCee
Q 020319 252 AVSQAR-AGADVV 263 (327)
Q Consensus 252 Als~A~-AGADiV 263 (327)
+.-.++ .|+|-+
T Consensus 360 l~~W~~e~gvDGf 372 (750)
T 1bf2_A 360 LAYWANTMGVDGF 372 (750)
T ss_dssp HHHHHHTSCCCEE
T ss_pred HHHHHHHcCCcEE
Confidence 888887 798843
No 202
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1
Probab=34.68 E-value=41 Score=32.22 Aligned_cols=45 Identities=31% Similarity=0.415 Sum_probs=33.2
Q ss_pred HHHHHHHHHcCCCeecC-----CCC--------------CCc--hHHHHHHHHHHCCCCCceeeehh
Q 020319 249 CKQAVSQARAGADVVSP-----SDM--------------MDG--RVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 249 ak~Als~A~AGADiVAP-----SDM--------------MDG--RV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
..||+.-|+|||.+|+| .|. -|| .|..|.+.++..|| ++-||.=|
T Consensus 169 ~~Qa~aaA~AGa~~ISPFVgRidd~~~~~~~~~~~~~~~~~Gv~~v~~i~~~y~~~g~-~T~v~~AS 234 (329)
T 3m16_A 169 FAQAQACAEAGTTLISPFVGRILDWYKANSGQSEYSASEDPGVVSVTEIYNFYKSHGF-KTIVMGAS 234 (329)
T ss_dssp HHHHHHHHHTTCSEEEEBHHHHHHHHHTTSSCCCCCTTTCHHHHHHHHHHHHHHHTTC-CCEEEEBC
T ss_pred HHHHHHHHHcCCcEEEeehhHHHHHhhhcccccccccccCcHHHHHHHHHHHHHHcCC-CCEEEeCC
Confidence 34999999999999999 111 123 46778888889998 67777543
No 203
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=34.57 E-value=66 Score=31.48 Aligned_cols=60 Identities=22% Similarity=0.447 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------Cc---HHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GL---VPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------gl---V~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
++.+.+.-+.++||++|-|=|+.+.... ...|+.- |- +.+.|++++++ .|-||-|+-+-+
T Consensus 33 gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~----~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~--Gi~VilD~V~NH 104 (557)
T 1zja_A 33 GLTEKLDYLKGLGIDAIWINPHYASPNT----DNGYDISDYREVMKEYGTMEDFDRLMAELKKR--GMRLMVDVVINH 104 (557)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEECCCT----TTTSSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHHHcCCCEEEECCCccCCCC----CCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccc
Confidence 6788889999999999999886432111 1223322 33 33444444444 799999998865
No 204
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=34.41 E-value=1.9e+02 Score=27.61 Aligned_cols=46 Identities=15% Similarity=0.307 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEE
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIY 216 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vi 216 (327)
...++++.+.+.|+..|++=+. .| + .+.+...|+.|++.+|++.|+
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a--------~g----~-~~~~~~~i~~l~~~~p~~pvi 278 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTA--------HG----H-SAGVLRKIAEIRAHFPNRTLI 278 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCS--------CT----T-CHHHHHHHHHHHHHCSSSCEE
T ss_pred hHHHHHHHHHHcCCCeEEEeee--------cC----c-chhHHHHHHHHHHHCCCCcEe
Confidence 3578899999999999886442 11 1 123567899999999887666
No 205
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=33.88 E-value=1.3e+02 Score=25.67 Aligned_cols=91 Identities=21% Similarity=0.195 Sum_probs=57.6
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
..+.++++.++|+..|++-.+ . +|..+. |+-...++.|++.. ++-|++ +|-
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~-~---~~g~~~------g~~~~~~~~l~~~~-~ipvia------------------~GG 203 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSI-D---RDGTKS------GYDTEMIRFVRPLT-TLPIIA------------------SGG 203 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEET-T---TTTSCS------CCCHHHHHHHGGGC-CSCEEE------------------ESC
T ss_pred HHHHHHHHHHCCCCEEEEEec-c---CCCCCC------CCCHHHHHHHHHhc-CCCEEE------------------ECC
Confidence 678888999999999887553 1 332221 22255677777643 333333 366
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeec-CCCCCCc--hHHHHHHHHHHCCC
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVVS-PSDMMDG--RVGAIRAALDAEGF 285 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiVA-PSDMMDG--RV~aIR~aLD~~Gf 285 (327)
|.+-+.+..+. ++|||-|. =|..|.+ -+..+++.|.++|+
T Consensus 204 I~~~~d~~~~~-------~~Gadgv~vGsal~~~~~~~~~~~~~l~~~g~ 246 (253)
T 1thf_D 204 AGKMEHFLEAF-------LAGADAALAASVFHFREIDVRELKEYLKKHGV 246 (253)
T ss_dssp CCSHHHHHHHH-------HTTCSEEEESHHHHTTCSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHH-------HcCChHHHHHHHHHcCCCCHHHHHHHHHHcCC
Confidence 77656665432 47998543 3455665 48888889999998
No 206
>3kwr_A Putative RNA-binding protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative, PS binding protein; HET: GOL; 1.45A {Lactobacillus plantarum}
Probab=33.40 E-value=40 Score=26.82 Aligned_cols=49 Identities=16% Similarity=0.314 Sum_probs=34.6
Q ss_pred CceeeEEEeeCCC--CcccCCCCCceEec--chhhHHHHHHHHHHcCCCeEEEee
Q 020319 128 NFVYPLFIHEGEE--DTPIGAMPGCYRLG--WRHGLVQEVAKARDVGVNSVVLFP 178 (327)
Q Consensus 128 dLI~PlFV~eg~~--~~~I~SMPGv~r~s--id~~l~~ev~~~~~lGI~sVlLFg 178 (327)
.++||+.++..++ ...++.+||++-.+ ++ ++++.+++++++=|.... +|
T Consensus 8 k~~Ypaii~~dd~gy~v~fPDlPGc~T~GdT~e-EAl~nA~EAL~~~Le~~~-iP 60 (97)
T 3kwr_A 8 EVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQ-VAADNAANALAIALFEQS-LP 60 (97)
T ss_dssp CCEEEEEEEECSSSEEEECTTCGGGCEEESSHH-HHHHHHHHHHHHHHTTSC-CC
T ss_pred ceEEEEEEEEcCCEEEEEeCCCCCcEEecCCHH-HHHHHHHHHHHHHHHhCc-CC
Confidence 4789999986553 46899999998875 43 477777777776554433 44
No 207
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=33.26 E-value=2.2e+02 Score=27.64 Aligned_cols=44 Identities=18% Similarity=0.294 Sum_probs=28.6
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
.+.++.+++.|+..|.|.- . .| ++ ..+...|+.+|+++ ++.|+.
T Consensus 146 ~e~~~~lveaGvdvIvldt--a------~G----~~-~~~~e~I~~ik~~~-~i~Vi~ 189 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDS--A------HG----HS-LNIIRTLKEIKSKM-NIDVIV 189 (400)
T ss_dssp CHHHHHHHHHTCSEEEECC--S------CC----SB-HHHHHHHHHHHTTC-CCEEEE
T ss_pred HHHHHHHHHcCCCEEEEeC--C------CC----Cc-ccHHHHHHHHHhcC-CCeEEE
Confidence 6788899999999776521 1 11 11 23567888999888 555553
No 208
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=33.02 E-value=77 Score=29.39 Aligned_cols=64 Identities=13% Similarity=0.217 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCcc
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVI 239 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~I 239 (327)
+++++++.+.|.. ++++...++ .-+.++++.++..+|.+.|.+ -.|
T Consensus 204 ~eea~eal~aGaD-~I~LDn~~~--------------~~~~~~v~~l~~~~~~v~iea-----------------SGG-- 249 (284)
T 1qpo_A 204 LEQLDAVLPEKPE-LILLDNFAV--------------WQTQTAVQRRDSRAPTVMLES-----------------SGG-- 249 (284)
T ss_dssp HHHHHHHGGGCCS-EEEEETCCH--------------HHHHHHHHHHHHHCTTCEEEE-----------------ESS--
T ss_pred HHHHHHHHHcCCC-EEEECCCCH--------------HHHHHHHHHhhccCCCeEEEE-----------------ECC--
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCeec
Q 020319 240 MNDETVHQLCKQAVSQARAGADVVS 264 (327)
Q Consensus 240 dND~Tv~~Lak~Als~A~AGADiVA 264 (327)
-|-+|+. .+|+.|+|+|+
T Consensus 250 It~~~i~-------~~a~tGVD~is 267 (284)
T 1qpo_A 250 LSLQTAA-------TYAETGVDYLA 267 (284)
T ss_dssp CCTTTHH-------HHHHTTCSEEE
T ss_pred CCHHHHH-------HHHhcCCCEEE
No 209
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=32.98 E-value=73 Score=29.06 Aligned_cols=67 Identities=21% Similarity=0.170 Sum_probs=41.1
Q ss_pred cHHHHHHHHHHHCCC-eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHH
Q 020319 198 LVPRTIWLLKDRYPD-LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAI 276 (327)
Q Consensus 198 lV~rAIr~iK~~fPd-l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aI 276 (327)
-+.++++.+|+.+|+ +.|+.- +++ ++. +++| .++|||+|--+-|--..+..+
T Consensus 167 ~~~~ai~~~r~~~~~~~~i~ve--------------------v~t---lee-~~~A---~~aGaD~I~ld~~~~~~l~~~ 219 (273)
T 2b7n_A 167 DLKSFLTHARKNLPFTAKIEIE--------------------CES---FEE-AKNA---MNAGADIVMCDNLSVLETKEI 219 (273)
T ss_dssp SHHHHHHHHGGGSCTTCCEEEE--------------------ESS---HHH-HHHH---HHHTCSEEEEETCCHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCceEEEE--------------------cCC---HHH-HHHH---HHcCCCEEEECCCCHHHHHHH
Confidence 367899999998875 223321 121 121 1123 258999997766554667777
Q ss_pred HHHHHHCCCCCceeee
Q 020319 277 RAALDAEGFQHVSIMS 292 (327)
Q Consensus 277 R~aLD~~Gf~~v~IMS 292 (327)
++.|+. +|.++.|++
T Consensus 220 v~~l~~-~~~~~~i~A 234 (273)
T 2b7n_A 220 AAYRDA-HYPFVLLEA 234 (273)
T ss_dssp HHHHHH-HCTTCEEEE
T ss_pred HHHhhc-cCCCcEEEE
Confidence 777876 576777753
No 210
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=32.54 E-value=54 Score=28.00 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=42.1
Q ss_pred HHHHHHHHHcCCCeE--EEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 160 VQEVAKARDVGVNSV--VLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 160 ~~ev~~~~~lGI~sV--lLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
.++++.+.+.|+..| .++|+-+ ..+.. .++-...++.+++. ++-|++ +|
T Consensus 143 ~~ea~~a~~~Gad~i~~~v~g~~~-~~~~~--------~~~~~~~i~~~~~~--~ipvia------------------~G 193 (234)
T 1yxy_A 143 FDEGLVAHQAGIDFVGTTLSGYTP-YSRQE--------AGPDVALIEALCKA--GIAVIA------------------EG 193 (234)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSST-TSCCS--------SSCCHHHHHHHHHT--TCCEEE------------------ES
T ss_pred HHHHHHHHHcCCCEEeeeccccCC-CCcCC--------CCCCHHHHHHHHhC--CCCEEE------------------EC
Confidence 566888899999988 6788632 22211 12223567777764 454444 36
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeec
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVS 264 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVA 264 (327)
-|.+-++++.+ .++|||.|.
T Consensus 194 GI~s~~~~~~~-------~~~Gad~v~ 213 (234)
T 1yxy_A 194 KIHSPEEAKKI-------NDLGVAGIV 213 (234)
T ss_dssp CCCSHHHHHHH-------HTTCCSEEE
T ss_pred CCCCHHHHHHH-------HHCCCCEEE
Confidence 67767766643 346898775
No 211
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=32.49 E-value=80 Score=28.30 Aligned_cols=44 Identities=16% Similarity=0.428 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTD 218 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitD 218 (327)
.+...++.+.+.|.++|.+.-.+.. +.+++.|.+.||++.|+|+
T Consensus 151 Tl~~ai~~L~~~G~~~I~~~~lv~~-----------------~~g~~~l~~~~p~v~I~t~ 194 (221)
T 1o5o_A 151 SSIKAIEILKENGAKKITLVALIAA-----------------PEGVEAVEKKYEDVKIYVA 194 (221)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSEEC-----------------HHHHHHHHHHCTTCEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEEEEEeC-----------------HHHHHHHHHHCCCcEEEEE
Confidence 3788899999999998887654321 3489999999999999996
No 212
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=32.35 E-value=82 Score=28.18 Aligned_cols=90 Identities=16% Similarity=0.160 Sum_probs=58.3
Q ss_pred HHHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------
Q 020319 201 RTIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-------- 270 (327)
Q Consensus 201 rAIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-------- 270 (327)
.-.+.|++..|+ ++-++|....||-. -..++-.+.+.+.+-.+.++|||.|.=..=-+
T Consensus 26 tv~~~i~~~~P~~~~iy~~D~~~~Pyg~------------~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~~~l~~l 93 (273)
T 2oho_A 26 TVVCELIRQLPHEKIVYIGDSARAPYGP------------RPKKQIKEYTWELVNFLLTQNVKMIVFACNTATAVAWEEV 93 (273)
T ss_dssp HHHHHHHHHCTTCCEEEEECGGGCCCTT------------SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEeCCCCCCCCC------------CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHhHHHHHHH
Confidence 378888899984 56669998888832 12244455555666666677999775322111
Q ss_pred ---------c-hHHHHHHHHHHCCCCCceeeehhhhhhcccc
Q 020319 271 ---------G-RVGAIRAALDAEGFQHVSIMSYTAKYASSFY 302 (327)
Q Consensus 271 ---------G-RV~aIR~aLD~~Gf~~v~IMSYSAKyASsfY 302 (327)
| -..+++.++...+..+++||+=..--.|.+|
T Consensus 94 r~~~~iPvigi~epa~~~A~~~~~~~rIgVlaT~~T~~~~~y 135 (273)
T 2oho_A 94 KAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIY 135 (273)
T ss_dssp HHHCSSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHH
T ss_pred HHhCCCCEEeccHHHHHHHHHhcCCCeEEEEECchhhcchHH
Confidence 2 2344666776667788999976665667776
No 213
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=32.18 E-value=1.8e+02 Score=24.29 Aligned_cols=73 Identities=10% Similarity=0.021 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCeEEEeecCCC-CCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPD-ALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~-~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
.+++.++.+.|+..|++++.-.. ..++ ....++-...++.+++.+ ++-|++ +|-
T Consensus 129 ~~e~~~~~~~G~d~i~~~~~g~t~~~~~------~~~~~~~~~~~~~~~~~~-~ipvia------------------~GG 183 (223)
T 1y0e_A 129 VEEAKNAARLGFDYIGTTLHGYTSYTQG------QLLYQNDFQFLKDVLQSV-DAKVIA------------------EGN 183 (223)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSTTSTT------CCTTHHHHHHHHHHHHHC-CSEEEE------------------ESS
T ss_pred HHHHHHHHHcCCCEEEeCCCcCcCCCCC------CCCCcccHHHHHHHHhhC-CCCEEE------------------ecC
Confidence 45677788899888766542110 0011 011344456777888775 444444 366
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeec
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVVS 264 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiVA 264 (327)
|.|-++++.+. ++|||.|.
T Consensus 184 I~~~~~~~~~~-------~~Gad~v~ 202 (223)
T 1y0e_A 184 VITPDMYKRVM-------DLGVHCSV 202 (223)
T ss_dssp CCSHHHHHHHH-------HTTCSEEE
T ss_pred CCCHHHHHHHH-------HcCCCEEE
Confidence 76677666443 35888775
No 214
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp}
Probab=32.13 E-value=2e+02 Score=27.74 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=60.0
Q ss_pred HHHHHHHHHHCCCeeEEeeecccCC--CCCCc---ceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecC---------
Q 020319 200 PRTIWLLKDRYPDLVIYTDVALDPY--SSDGH---DGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSP--------- 265 (327)
Q Consensus 200 ~rAIr~iK~~fPdl~VitDVcLc~Y--TshGH---cGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAP--------- 265 (327)
...++.+|+.-|++-|++.--=.|. ++.|+ -|-|+. . .-++-..-|++-.-.+.+.|.+|-+=
T Consensus 124 ~~~lk~A~~~~~~l~i~aspWSpP~wMk~n~~~~~gg~L~~-~--~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~ 200 (447)
T 2wnw_A 124 IPLISGALRLNPHMKLMASPWSPPAFMKTNNDMNGGGKLRR-E--CYADWADIIINYLLEYRRHGINVQALSVQNEPVAV 200 (447)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCCCGGGBTTSCSBSCCBBCG-G--GHHHHHHHHHHHHHHHHHTTCCCCEEESCSSTTCC
T ss_pred HHHHHHHHHhCCCcEEEEecCCCcHHhccCCCcCCCCcCCH-H--HHHHHHHHHHHHHHHHHHcCCCeeEEeeeccCCCC
Confidence 3466777777899999987766663 44443 233321 0 12344566888888888899986542
Q ss_pred ----CCCCCch-----HH-HHHHHHHHCCCCCceeeehh
Q 020319 266 ----SDMMDGR-----VG-AIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 266 ----SDMMDGR-----V~-aIR~aLD~~Gf~~v~IMSYS 294 (327)
|--|+.. |+ .++.+|+++|+.+|-||.+=
T Consensus 201 ~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~kI~~~D 239 (447)
T 2wnw_A 201 KTWDSCLYSVEEETAFAVQYLRPRLARQGMDEMEIYIWD 239 (447)
T ss_dssp CSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCEEEEEE
T ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEeC
Confidence 2224422 55 77889999999888888653
No 215
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=32.12 E-value=1.2e+02 Score=27.65 Aligned_cols=81 Identities=23% Similarity=0.186 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
+++.-++.+...|-+.++|-=. .-...+.|+.+.+=-++|..+|+.| ++-||. |.+|+ .|
T Consensus 145 e~~~Av~~i~~~Gn~~i~L~~R------G~~~~~~y~~~~v~L~ai~~lk~~~-~~pVi~------d~sH~-------~g 204 (262)
T 1zco_A 145 ELLYSAEYIMAQGNENVILCER------GIRTFETATRFTLDISAVPVVKELS-HLPIIV------DPSHP-------AG 204 (262)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEC------CBCCSCCSSSSBCCTTHHHHHHHHB-SSCEEE------CSSTT-------TC
T ss_pred HHHHHHHHHHHCCCCeEEEEEC------CCCCCCCcChhhcCHHHHHHHHhhh-CCCEEE------EcCCC-------CC
Confidence 4555666666778777666421 0011124544444448999999986 333544 56665 12
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCC--eec
Q 020319 238 VIMNDETVHQLCKQAVSQARAGAD--VVS 264 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGAD--iVA 264 (327)
+.+=+..++++|+ ..||| ||=
T Consensus 205 ---~~~~v~~~~~aAv---a~Ga~Gl~iE 227 (262)
T 1zco_A 205 ---RRSLVIPLAKAAY---AIGADGIMVE 227 (262)
T ss_dssp ---SGGGHHHHHHHHH---HTTCSEEEEE
T ss_pred ---ccchHHHHHHHHH---HcCCCEEEEE
Confidence 1112445566655 68999 763
No 216
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=31.78 E-value=2.9e+02 Score=24.93 Aligned_cols=49 Identities=18% Similarity=0.318 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHcCCCeEEE--e-ec-CCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeee
Q 020319 158 GLVQEVAKARDVGVNSVVL--F-PK-VPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDV 219 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlL--F-gv-i~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDV 219 (327)
.|.++++.+.+.|+..+=+ - |. +|+- ++ | +..|+.||+.+|++.+-++.
T Consensus 41 ~L~~~i~~l~~~G~d~lHvDVmDg~FVpni--------t~---G--~~~v~~lr~~~p~~~ldvHL 93 (246)
T 3inp_A 41 RLGDDVKAVLAAGADNIHFDVMDNHYVPNL--------TF---G--PMVLKALRDYGITAGMDVHL 93 (246)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCB--------CC---C--HHHHHHHHHHTCCSCEEEEE
T ss_pred hHHHHHHHHHHcCCCEEEEEecCCCcCcch--------hc---C--HHHHHHHHHhCCCCeEEEEE
Confidence 3889999999999886443 0 11 2220 11 3 37899999999887664433
No 217
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=31.71 E-value=93 Score=28.22 Aligned_cols=90 Identities=14% Similarity=0.176 Sum_probs=60.6
Q ss_pred HHHHHHHHCC--CeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCch--HHHHH
Q 020319 202 TIWLLKDRYP--DLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGR--VGAIR 277 (327)
Q Consensus 202 AIr~iK~~fP--dl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGR--V~aIR 277 (327)
..|.|++..| +++-++|..-.|| |.=+-|+-.+.+.+.+-.+.++|||.|.=..=-+-- +.+||
T Consensus 22 v~~~i~~~lp~~~~iy~~D~a~~PY------------G~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~~~al~~lr 89 (268)
T 3out_A 22 IVKNLMSILPNEDIIYFGDIARIPY------------GTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIAKDIVQ 89 (268)
T ss_dssp HHHHHHHHCTTCCEEEEECTTTCCC------------TTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCcEEEecCCCCCCC------------CCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHH
Confidence 4788888998 5888999999999 223446666667777777788899987543322221 23455
Q ss_pred HHH-H-------------HCCCCCceeeehhhhhhccccc
Q 020319 278 AAL-D-------------AEGFQHVSIMSYTAKYASSFYG 303 (327)
Q Consensus 278 ~aL-D-------------~~Gf~~v~IMSYSAKyASsfYG 303 (327)
+.+ + ..+..+|+||+=.+--.|.||-
T Consensus 90 ~~~~~iPvigiiep~~~~~~~~~~IGVLaT~~Ti~s~~y~ 129 (268)
T 3out_A 90 EIAKAIPVIDVITAGVSLVDNLNTVGVIATPATINSNAYA 129 (268)
T ss_dssp HHHTTSCEEEHHHHHHHTTTTCSEEEEEECHHHHHHTHHH
T ss_pred HhcCCCCEEeccHHHHHHhccCCeEEEEecCcccccHHHH
Confidence 554 1 3345688888877777777774
No 218
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=31.21 E-value=1.1e+02 Score=29.71 Aligned_cols=98 Identities=9% Similarity=0.065 Sum_probs=62.0
Q ss_pred HHHHHHHHHHcCCCeEEEeec-----------CCCCCCCcccccC-cCCCCcHHHHHHHHHHHC-----CCeeEEeeecc
Q 020319 159 LVQEVAKARDVGVNSVVLFPK-----------VPDALKSPTGDEA-YNDNGLVPRTIWLLKDRY-----PDLVIYTDVAL 221 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgv-----------i~~~~KD~~Gs~A-~n~~glV~rAIr~iK~~f-----Pdl~VitDVcL 221 (327)
..+-++.+.+.|...|-|-+- ..+.-.|+.|-.. -|.--++.+.|++++++. ++..|..=+..
T Consensus 172 F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~ 251 (419)
T 3l5a_A 172 YRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATP 251 (419)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECS
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEeccc
Confidence 344455678899999999653 1233467777665 555567788889998886 47777766665
Q ss_pred cCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHH-cCCCeecCCCC
Q 020319 222 DPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQAR-AGADVVSPSDM 268 (327)
Q Consensus 222 c~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~-AGADiVAPSDM 268 (327)
++|... .. | ++.++++ +.|-.+.+ +|+|.|.-|..
T Consensus 252 ~~~~~~-~~------G-~~~ed~~----~la~~L~~~~Gvd~I~vs~g 287 (419)
T 3l5a_A 252 EETRGS-DL------G-YTIDEFN----QLIDWVMDVSNIQYLAIASW 287 (419)
T ss_dssp CEEETT-EE------E-ECHHHHH----HHHHHHHHHSCCCCEEECCT
T ss_pred ccccCC-CC------C-CCHHHHH----HHHHHHHhhcCCcEEEEeeC
Confidence 544211 01 2 2223443 35556677 99999987763
No 219
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=30.99 E-value=54 Score=27.91 Aligned_cols=56 Identities=25% Similarity=0.264 Sum_probs=33.7
Q ss_pred HHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHH
Q 020319 202 TIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRA 278 (327)
Q Consensus 202 AIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~ 278 (327)
.|+.||+.+ +..|+.|+-|. |--.|.+..++. ++++|||+|.=+--+. ..+..||+
T Consensus 42 ~i~~lr~~~-~~~v~~D~kl~-----------------DI~~t~~~~v~~---~~~~Gad~vtvh~~~g~~~i~~~~~ 98 (208)
T 2czd_A 42 IIRRLKEET-GVEIIADLKLA-----------------DIPNTNRLIARK---VFGAGADYVIVHTFVGRDSVMAVKE 98 (208)
T ss_dssp HHHHHHHHH-CCEEEEEEEEC-----------------SCHHHHHHHHHH---HHHTTCSEEEEESTTCHHHHHHHHT
T ss_pred HHHHHHHcC-CCEEEEEeeeC-----------------chHHHHHHHHHH---HHhcCCCEEEEeccCCHHHHHHHHH
Confidence 567788876 66788888662 334455555544 4579999885443332 23444443
No 220
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=30.99 E-value=85 Score=28.20 Aligned_cols=89 Identities=17% Similarity=0.159 Sum_probs=56.2
Q ss_pred HHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHH-HHHHHH-cCCCeecCCCCC--------
Q 020319 202 TIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQ-AVSQAR-AGADVVSPSDMM-------- 269 (327)
Q Consensus 202 AIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~-Als~A~-AGADiVAPSDMM-------- 269 (327)
..+.|++..|+ ++-++|..-.||- . .+.+++.....+ +-.+.+ +|||.|.=..=-
T Consensus 18 v~~~i~~~lP~~~~iy~~D~~~~PyG------------~-~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas~~~l~~ 84 (272)
T 1zuw_A 18 VAKEIMRQLPKENIIYVGDTKRCPYG------------P-RPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDD 84 (272)
T ss_dssp HHHHHHHHSTTCCEEEEECGGGCCCS------------S-SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcEEEeccCCCCCCC------------C-CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhhHHHHHH
Confidence 48889999996 5556999999982 2 223444444444 444445 799977431111
Q ss_pred ---------Cc-hHHHHHHHHHHCCCCCceeeehhhhhhccccc
Q 020319 270 ---------DG-RVGAIRAALDAEGFQHVSIMSYTAKYASSFYG 303 (327)
Q Consensus 270 ---------DG-RV~aIR~aLD~~Gf~~v~IMSYSAKyASsfYG 303 (327)
=| -.-+++.++...+..+|+||+=.+--.|.+|-
T Consensus 85 lr~~~~iPVigiiepa~~~A~~~~~~~rIgVlaT~~T~~s~~y~ 128 (272)
T 1zuw_A 85 IQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYE 128 (272)
T ss_dssp HHHHCSSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHTTHHH
T ss_pred HHHHCCCCEEcccHHHHHHHHHhcCCCEEEEEEChhhhhhhHHH
Confidence 13 33566677766677889999877667777763
No 221
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=30.89 E-value=1.3e+02 Score=25.60 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY 210 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f 210 (327)
.+.+.++.+.+.|+..+-| ++ +|..=-... ..| .+.++.||+.+
T Consensus 24 ~~~~~i~~~~~~G~d~i~l-~~-----~dg~f~~~~-~~~--~~~i~~l~~~~ 67 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHV-DV-----MDGRFVPNI-TIG--PLVVDSLRPIT 67 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEE-EE-----EBSSSSSCB-CCC--HHHHHHHGGGC
T ss_pred HHHHHHHHHHHCCCCEEEE-ee-----ccCCccccc-ccC--HHHHHHHHhcc
Confidence 4788899999999977544 32 110000001 123 47788888775
No 222
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=30.77 E-value=71 Score=31.30 Aligned_cols=60 Identities=15% Similarity=0.410 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------Cc---HHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GL---VPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------gl---V~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
++.+.+..+.++||++|-|=|+.+.... ...|+.- |- +.+.|++++++ .|-||-|+-+-+
T Consensus 32 gi~~~ldyl~~LGv~~I~l~Pi~~~~~~----~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~--Gi~VilD~V~NH 103 (558)
T 1uok_A 32 GIISKLDYLKELGIDVIWLSPVYESPND----DNGYDISDYCKIMNEFGTMEDWDELLHEMHER--NMKLMMDLVVNH 103 (558)
T ss_dssp HHHTTHHHHHHHTCCEEEECCCEECCCT----TTTSSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHHHcCCCEEEECCcccCCCC----CCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccc
Confidence 5778888999999999999886432211 2233332 22 34445555554 799999998754
No 223
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=30.39 E-value=1.5e+02 Score=27.97 Aligned_cols=105 Identities=10% Similarity=0.058 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
++.+.++.+.++||..|+ =|-.| ++. . ..+-...|+.++|+..++..|.+ +.-|+ ||.
T Consensus 105 ei~~~L~~~~~~GI~niL-RGDpp---~~~-----~-~~~~~~~A~~l~~~~~~~F~IGv--A~yPe---~H~------- 162 (315)
T 3ijd_A 105 EFRRLTRPVSGQDAFSVF-VGAAS---RNQ-----S-VLLKLSDAYKIRQDVNPDLLLGG--VAIPE---RHM------- 162 (315)
T ss_dssp HHHHHHSCCTTCCCEEEE-ECCCC-------------CCSCHHHHHHHHHHHCTTSEEEE--EECGG---GHH-------
T ss_pred HHHHHHHHHHHcCCcEEe-cCCCC---CCC-----C-CCcCHHHHHHHHHhcCCCEEEEE--EECCC---CCC-------
Confidence 466677778899999974 66422 222 1 22346789999988777755543 33333 561
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCch-HHHHH----HHHHHCCCCCcee
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGR-VGAIR----AALDAEGFQHVSI 290 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGR-V~aIR----~aLD~~Gf~~v~I 290 (327)
..++| ++.| ..-.+||||.+=--=..|-. ....+ +...++|..+++|
T Consensus 163 ~~~~d--~~~L----k~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPI 214 (315)
T 3ijd_A 163 KNTDE--HLRI----IDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPI 214 (315)
T ss_dssp HHSCH--HHHH----HHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred CHHHH--HHHH----HHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcE
Confidence 12222 3333 33468999998887777733 23333 5566789855654
No 224
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=30.33 E-value=86 Score=30.99 Aligned_cols=124 Identities=15% Similarity=0.150 Sum_probs=76.8
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------CcHHHHHHHHHHHCC-CeeEEeeecccC
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GLVPRTIWLLKDRYP-DLVIYTDVALDP 223 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------glV~rAIr~iK~~fP-dl~VitDVcLc~ 223 (327)
.+. ++.+.+.-+.++||++|-|=|+.+.. . +..|++- |-...--++|++..- .|-||-|+-+-.
T Consensus 170 d~~-gi~~~LdyLk~LGvt~I~L~Pi~~~~--~---~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH 243 (583)
T 1ea9_C 170 DLQ-GVIDHLDHLSKLGVNAVYFTPLFKAT--T---NHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNH 243 (583)
T ss_dssp CHH-HHHHTHHHHHHHTCSEEEECCCSSCS--S---SSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSB
T ss_pred CHH-HHHHhhHHHHHcCCCEEEECCCccCC--C---CCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcccc
Confidence 453 68888999999999999999974321 1 2233333 233444444444443 699999998765
Q ss_pred CCCCCcc-------e---------eecC-----C----------C-------ccccHHHHHHHHHHHHHHH-HcCCCee-
Q 020319 224 YSSDGHD-------G---------IVRE-----D----------G-------VIMNDETVHQLCKQAVSQA-RAGADVV- 263 (327)
Q Consensus 224 YTshGHc-------G---------Il~~-----~----------G-------~IdND~Tv~~Lak~Als~A-~AGADiV- 263 (327)
.....+- | ..++ + + .-.|.+..+.|.+.+.-.. +-|+|-+
T Consensus 244 ~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gvDGfR 323 (583)
T 1ea9_C 244 SGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWR 323 (583)
T ss_dssp CCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEE
T ss_pred CCCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHhcCceEEE
Confidence 4332220 0 0000 0 0 1247788888999888888 8898854
Q ss_pred --cCCCCCCchHHHHHHHHHHC
Q 020319 264 --SPSDMMDGRVGAIRAALDAE 283 (327)
Q Consensus 264 --APSDMMDGRV~aIR~aLD~~ 283 (327)
+...+-..-+..||+++++.
T Consensus 324 ~D~~~~~~~~f~~~~~~~v~~~ 345 (583)
T 1ea9_C 324 LDVANEVSHQFWREFRRVVKQA 345 (583)
T ss_dssp ETTCTTSCHHHHHHHHHHHHHH
T ss_pred ecccccCCHHHHHHHHHHHHhh
Confidence 33333335678899999875
No 225
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=30.33 E-value=15 Score=33.57 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=51.5
Q ss_pred EecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcce
Q 020319 152 RLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDG 231 (327)
Q Consensus 152 r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcG 231 (327)
|...+ .+++.++.+.+.|+..|.|- |..|. ..| ..+.+-|+.||+++|++ +..-|||++
T Consensus 155 ~~~~~-~~~~~~~~~~~~G~d~i~l~--------DT~G~--~~P-~~~~~lv~~l~~~~~~~---------~l~~H~Hn~ 213 (302)
T 2ftp_A 155 DVDPR-QVAWVARELQQMGCYEVSLG--------DTIGV--GTA-GATRRLIEAVASEVPRE---------RLAGHFHDT 213 (302)
T ss_dssp CCCHH-HHHHHHHHHHHTTCSEEEEE--------ESSSC--CCH-HHHHHHHHHHTTTSCGG---------GEEEEEBCT
T ss_pred CCCHH-HHHHHHHHHHHcCCCEEEEe--------CCCCC--cCH-HHHHHHHHHHHHhCCCC---------eEEEEeCCC
Confidence 66665 68888888999999877663 33454 223 24566788888888753 456688875
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCeecC
Q 020319 232 IVREDGVIMNDETVHQLCKQAVSQARAGADVVSP 265 (327)
Q Consensus 232 Il~~~G~IdND~Tv~~Lak~Als~A~AGADiVAP 265 (327)
. |. - ...++.-.++||+.|==
T Consensus 214 ~----Gl--a-------~An~laAv~aGa~~vd~ 234 (302)
T 2ftp_A 214 Y----GQ--A-------LANIYASLLEGIAVFDS 234 (302)
T ss_dssp T----SC--H-------HHHHHHHHHTTCCEEEE
T ss_pred c----cH--H-------HHHHHHHHHhCCCEEEe
Confidence 3 21 0 11345556789988743
No 226
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=30.10 E-value=50 Score=31.83 Aligned_cols=44 Identities=39% Similarity=0.468 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCCeecC-----CCC---------------CCc--hHHHHHHHHHHCCCCCceeeeh
Q 020319 249 CKQAVSQARAGADVVSP-----SDM---------------MDG--RVGAIRAALDAEGFQHVSIMSY 293 (327)
Q Consensus 249 ak~Als~A~AGADiVAP-----SDM---------------MDG--RV~aIR~aLD~~Gf~~v~IMSY 293 (327)
..||+.-|+|||.+|+| .|. -|| .|..|.+.++..|| ++-||.=
T Consensus 188 ~~Qa~~aAeAGa~~ISPFVGRidD~~~~~~~~~~~~~~~~~~Gv~~v~~i~~~yk~~g~-~T~Vl~A 253 (345)
T 3tkf_A 188 KAQAKACAEAGVYLVSPFVGRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKLYKSHGF-KTIVMGA 253 (345)
T ss_dssp HHHHHHHHHTTCSEEEEBSHHHHHHHHHHTTCSSCCCGGGCHHHHHHHHHHHHHHHHTC-CSEEEEB
T ss_pred HHHHHHHHHcCCcEEEeecchHHHHhhhccccccccccccCCHHHHHHHHHHHHHHcCC-CCEEEeC
Confidence 34999999999999999 110 122 46677777888888 6677753
No 227
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=30.09 E-value=90 Score=27.48 Aligned_cols=94 Identities=19% Similarity=0.244 Sum_probs=58.9
Q ss_pred HHHHHHHHCCCe--eEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC---------
Q 020319 202 TIWLLKDRYPDL--VIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------- 270 (327)
Q Consensus 202 AIr~iK~~fPdl--~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD--------- 270 (327)
..+.|++..|+- +-++|..-.||- .-..++-.+++.+.+-.+.++|||.|.=..--+
T Consensus 15 v~~~l~~~~P~~~~iy~~D~~~~pyG------------~~s~~~i~~~~~~~~~~L~~~g~d~iviaCnTa~~~~~~~lr 82 (254)
T 1b73_A 15 VLKAIRNRYRKVDIVYLGDTARVPYG------------IRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLK 82 (254)
T ss_dssp HHHHHHHHSTTCEEEEEECTTTCCCT------------TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHTTSHHHHH
T ss_pred HHHHHHHhCCCCcEEEeecCCCCCCC------------cCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHHHHH
Confidence 678888889963 344999888882 222333444455555556678999875332222
Q ss_pred --------c-hHHHHHHHHHHCCCCCceeeehhhhhhccccchhHH
Q 020319 271 --------G-RVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFRE 307 (327)
Q Consensus 271 --------G-RV~aIR~aLD~~Gf~~v~IMSYSAKyASsfYGPFRd 307 (327)
| -..+++.++...+-.+++||+=.....|.+|--+-+
T Consensus 83 ~~~~iPvigi~e~~~~~A~~~~~~~rigVlaT~~T~~~~~y~~~l~ 128 (254)
T 1b73_A 83 KEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLE 128 (254)
T ss_dssp HHSSSCEEESHHHHHHHHHHHCSSCEEEEEECHHHHHHCHHHHHHH
T ss_pred HhCCCCEEeeeHHHHHHHHHccCCCEEEEEEChHHhhhHHHHHHHH
Confidence 2 223566666655778999998777777888754443
No 228
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=29.65 E-value=99 Score=28.69 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=24.5
Q ss_pred HcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeee
Q 020319 257 RAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMS 292 (327)
Q Consensus 257 ~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMS 292 (327)
++|||+|--+-|--..+..+++.|+. +|.++.|.+
T Consensus 215 ~aGaD~I~ld~~~~~~l~~~v~~l~~-~~~~~~I~A 249 (299)
T 2jbm_A 215 EAGADLVLLDNFKPEELHPTATVLKA-QFPSVAVEA 249 (299)
T ss_dssp HTTCSEEEEESCCHHHHHHHHHHHHH-HCTTSEEEE
T ss_pred HcCCCEEEECCCCHHHHHHHHHHhhc-cCCCeeEEE
Confidence 68999997766544666666777775 566676653
No 229
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=29.62 E-value=79 Score=28.68 Aligned_cols=89 Identities=13% Similarity=0.114 Sum_probs=54.8
Q ss_pred HHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC---------
Q 020319 202 TIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------- 270 (327)
Q Consensus 202 AIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD--------- 270 (327)
-.+.|++..|+ ++-++|..-.||- .-..++-.+++.+.+-.+.++|||.|.=..=-+
T Consensus 37 v~~~i~~~~P~~~~iy~~D~~~~Pyg------------~~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas~~~l~~lr 104 (286)
T 2jfq_A 37 VAKEIMRQLPNETIYYLGDIGRCPYG------------PRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQ 104 (286)
T ss_dssp HHHHHHHHCTTCCEEEEECTTTCCCT------------TSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCccEEEeccCCCCCcC------------CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchhHHHHHHHH
Confidence 47888888985 4555899888982 223344444555555555667999775322111
Q ss_pred --------c-hHHHHHHHHHHCCCCCceeeehhhhhhcccc
Q 020319 271 --------G-RVGAIRAALDAEGFQHVSIMSYTAKYASSFY 302 (327)
Q Consensus 271 --------G-RV~aIR~aLD~~Gf~~v~IMSYSAKyASsfY 302 (327)
| -..+++.++...+..+++||+=.+--.|.+|
T Consensus 105 ~~~~iPVigi~e~a~~~A~~~~~~~rIgVLaT~~T~~~~~y 145 (286)
T 2jfq_A 105 KTLSISVIGVIEPGARTAIMTTRNQNVLVLGTEGTIKSEAY 145 (286)
T ss_dssp HHCSSEEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHH
T ss_pred HhCCCCEEeccHHHHHHHHHhcCCCEEEEEeChHHhcchHH
Confidence 2 2235566666567778999875555566665
No 230
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=29.19 E-value=68 Score=29.22 Aligned_cols=100 Identities=26% Similarity=0.371 Sum_probs=65.6
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
|.-.++++.++||+.|+++-. .|..| .++...++ .+|+++| | |.|.- +.|.
T Consensus 40 l~la~era~e~~Ik~iVVASs--------sG~TA-------~k~~e~~~---~~lVvVT------h----~~GF~-~pg~ 90 (206)
T 1t57_A 40 LELVGERADQLGIRNFVVASV--------SGETA-------LRLSEMVE---GNIVSVT------H----HAGFR-EKGQ 90 (206)
T ss_dssp HHHHHHHHHHHTCCEEEEECS--------SSHHH-------HHHHTTCC---SEEEEEC------C----CTTSS-STTC
T ss_pred HHHHHHHHHHcCCCEEEEEeC--------CCHHH-------HHHHHHcc---CCEEEEe------C----cCCCC-CCCC
Confidence 444455799999999998753 23332 12222221 1566655 3 56654 3343
Q ss_pred c-ccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeeehhhh
Q 020319 239 I-MNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAK 296 (327)
Q Consensus 239 I-dND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYSAK 296 (327)
. ..+++.+.| -+.|..|+.=+-.+-|-=.+|++.+ -|+..+-||+.+=+
T Consensus 91 ~e~~~e~~~~L-------~~~G~~V~t~tH~lsG~eR~is~kf--GG~~p~eiiA~tLR 140 (206)
T 1t57_A 91 LELEDEARDAL-------LERGVNVYAGSHALSGVGRGISNRF--GGVTPVEIMAETLR 140 (206)
T ss_dssp CSSCHHHHHHH-------HHHTCEEECCSCTTTTHHHHHHHHH--CSCCHHHHHHHHHT
T ss_pred CcCCHHHHHHH-------HhCCCEEEEeeccccchhHHHHHhc--CCCCHHHHHHHHHH
Confidence 3 346666654 4679999999999999888999855 78888888887644
No 231
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=29.04 E-value=2.2e+02 Score=23.98 Aligned_cols=61 Identities=18% Similarity=0.210 Sum_probs=36.8
Q ss_pred HHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC
Q 020319 202 TIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD 270 (327)
Q Consensus 202 AIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD 270 (327)
..+.|++..|+..++. .-.||.. ..+ ++..+-....+.+.+.+..+.++|+|.|.=..--+
T Consensus 26 ~~~~~~~~~p~~~i~~--~~~p~g~---~~~---~~~~~~~~~~~~l~~~~~~l~~~g~d~iviaCnta 86 (228)
T 2eq5_A 26 HGRIIESAFPELKVVS--RCIEDQP---KGI---YNEETEREAEPKIIRLAKEFEREGVDAIIISCAAD 86 (228)
T ss_dssp HHHHHHHHCTTEEEEE--EECSSCT---TCC---SSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSTTC
T ss_pred HHHHHHhhCCCCeEEE--EeCCCCc---hhc---cccccHHHhHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 4667888999987777 2235532 111 12222233445677777677789999987655444
No 232
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=29.04 E-value=1.3e+02 Score=27.49 Aligned_cols=106 Identities=16% Similarity=0.222 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv----------------- 90 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGS--------NGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS----------------- 90 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSG--------GGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec-----------------
Confidence 4777888899999999999995 34443322223445666666665 356666522
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCe---ecCCCC-----CCchHHHHHHHHHHCCCCCceeeehhh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADV---VSPSDM-----MDGRVGAIRAALDAEGFQHVSIMSYTA 295 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADi---VAPSDM-----MDGRV~aIR~aLD~~Gf~~v~IMSYSA 295 (327)
|...-++|++ .|-..+++|||- +.|.-- =+|-+...|+..+.. +++||=|-.
T Consensus 91 g~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~---~lPiilYn~ 150 (307)
T 3s5o_A 91 GCESTQATVE----MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLS---PIPVVLYSV 150 (307)
T ss_dssp CCSSHHHHHH----HHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred CCCCHHHHHH----HHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhc---CCCEEEEeC
Confidence 2223345554 444446789985 456542 258888888888875 579998864
No 233
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=28.96 E-value=65 Score=28.49 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=30.2
Q ss_pred HHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 201 rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
..|+.||+. +..|+.|+-| + |+-.|++..++.+ +++|||+|.=.-
T Consensus 56 ~~v~~lr~~--~~~v~lD~kl---------------~--Dip~t~~~~i~~~---~~~Gad~vTvH~ 100 (245)
T 1eix_A 56 QFVRELQQR--GFDIFLDLKF---------------H--DIPNTAAHAVAAA---ADLGVWMVNVHA 100 (245)
T ss_dssp HHHHHHHHT--TCCEEEEEEE---------------C--SCHHHHHHHHHHH---HHHTCSEEEEBG
T ss_pred HHHHHHHHC--CCcEEEEeec---------------c--ccHHHHHHHHHHH---HhCCCCEEEEec
Confidence 467888875 3456677754 2 6677887655544 689999985443
No 234
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=28.71 E-value=1e+02 Score=27.69 Aligned_cols=100 Identities=16% Similarity=0.085 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC--CeeEEeeecccCCCCCCcceeecC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP--DLVIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP--dl~VitDVcLc~YTshGHcGIl~~ 235 (327)
.++.+++++++.|...|-+--.+ |+ ..+ .-+.+-++.+++... .+.+|-. .|-.-.|-+ +
T Consensus 93 ~~~~~ve~Ai~~Ga~~v~~~~ni----g~----~~~---~~~~~~~~~v~~~~~~~~~~vIi~----~~~~G~~~~---~ 154 (263)
T 1w8s_A 93 VANCSVEEAVSLGASAVGYTIYP----GS----GFE---WKMFEELARIKRDAVKFDLPLVVE----SFPRGGKVV---N 154 (263)
T ss_dssp EESSCHHHHHHTTCSEEEEEECT----TS----TTH---HHHHHHHHHHHHHHHHHTCCEEEE----ECCCSTTCC---C
T ss_pred hHHHHHHHHHHCCCCEEEEEEec----CC----cCH---HHHHHHHHHHHHHHHHcCCeEEEE----eeCCCCccc---c
Confidence 35678999999999999885432 21 111 234455555553221 3323333 233222211 1
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHC
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAE 283 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~ 283 (327)
+ .+++.+...+++ -+++|||+|-=| --|.+..+|+.-...
T Consensus 155 ~---~s~~~i~~a~~~---a~~~GAD~vkt~--~~~~~e~~~~~~~~~ 194 (263)
T 1w8s_A 155 E---TAPEIVAYAARI---ALELGADAMKIK--YTGDPKTFSWAVKVA 194 (263)
T ss_dssp T---TCHHHHHHHHHH---HHHHTCSEEEEE--CCSSHHHHHHHHHHT
T ss_pred C---CCHHHHHHHHHH---HHHcCCCEEEEc--CCCCHHHHHHHHHhC
Confidence 1 134455544444 457999998766 235666666665444
No 235
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=28.68 E-value=71 Score=30.39 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=56.9
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCC-CCCcccccCcCCC---CcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecC
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDA-LKSPTGDEAYNDN---GLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~-~KD~~Gs~A~n~~---glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~ 235 (327)
.+.++.+++.|++.|-+|.-..+. .+ ..+. +.+ ..+.++|+.+|+.-+.+-|..+.-
T Consensus 77 ~~di~~a~~~g~~~v~i~~~~s~~~~~-~~~~---s~~e~l~~~~~~v~~ak~~g~~~~v~~~~e--------------- 137 (382)
T 2ztj_A 77 LDAAKVAVETGVQGIDLLFGTSKYLRA-PHGR---DIPRIIEEAKEVIAYIREAAPHVEVRFSAE--------------- 137 (382)
T ss_dssp HHHHHHHHHTTCSEEEEEECC---------CC---CHHHHHHHHHHHHHHHHHHCTTSEEEEEET---------------
T ss_pred hhhHHHHHHcCCCEEEEEeccCHHHHH-HhCC---CHHHHHHHHHHHHHHHHHcCCCEEEEEEEE---------------
Confidence 344788899999999999754431 22 2221 111 235678888888875544433221
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--------hHHHHHHHH
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDG--------RVGAIRAAL 280 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDG--------RV~aIR~aL 280 (327)
+.. ..+.+.+.+.+-...++ ||+|.-.||.=. .|.++|+.+
T Consensus 138 d~~---~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 186 (382)
T 2ztj_A 138 DTF---RSEEQDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVV 186 (382)
T ss_dssp TTT---TSCHHHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHH
T ss_pred eCC---CCCHHHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhc
Confidence 111 12345666666666788 999999987642 466666653
No 236
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=28.62 E-value=1.1e+02 Score=30.75 Aligned_cols=121 Identities=12% Similarity=0.124 Sum_probs=75.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------Cc---HHHHHHHHHHHCCCeeEEeeecccCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GL---VPRTIWLLKDRYPDLVIYTDVALDPYS 225 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------gl---V~rAIr~iK~~fPdl~VitDVcLc~YT 225 (327)
++.+.+..+.++||++|-|-|+-+....+. ..|++- |- +.+.|++++++ .|-||-|+-+....
T Consensus 145 gi~~~L~yl~~lGv~~I~L~Pi~~~~~~~~---wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~--Gi~VilD~V~NH~~ 219 (602)
T 2bhu_A 145 AAAEKLPYLKELGVTAIQVMPLAAFDGQRG---WGYDGAAFYAPYAPYGRPEDLMALVDAAHRL--GLGVFLDVVYNHFG 219 (602)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEECSSSCC---CSTTCCEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSCCC
T ss_pred HHHHHHHHHHHcCCCEEEECChhhccCCCC---CCcccccCcccCcCCCCHHHHHHHHHHHHHC--CCEEEEEecccccc
Confidence 578889999999999999988632211121 133332 22 34445555554 79999999876654
Q ss_pred CCCcc------eeec-----CCC---ccccHHHHHHHHHHHHHHH-HcCCCee---cCCCCCC----chHHHHHHHHHHC
Q 020319 226 SDGHD------GIVR-----EDG---VIMNDETVHQLCKQAVSQA-RAGADVV---SPSDMMD----GRVGAIRAALDAE 283 (327)
Q Consensus 226 shGHc------GIl~-----~~G---~IdND~Tv~~Lak~Als~A-~AGADiV---APSDMMD----GRV~aIR~aLD~~ 283 (327)
..|+. .... .-| ..+|.+..+.+.+.+.-.. +-|.|-+ +...|.| .-+..||+.+++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~gvDGfR~D~~~~i~~~~~~~fl~~~~~~v~~~ 299 (602)
T 2bhu_A 220 PSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQEIHEL 299 (602)
T ss_dssp SSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCSEEEETTGGGCCCCSSSCHHHHHHHHHHTT
T ss_pred cCCccccccCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCEEEEechHhhhccchHHHHHHHHHHHhhc
Confidence 33321 0110 011 2357788888888888888 4898744 3344433 3678888888775
No 237
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=28.48 E-value=38 Score=31.66 Aligned_cols=98 Identities=11% Similarity=-0.023 Sum_probs=58.3
Q ss_pred HHHHHHHcCCCeEEEeecCCCCCCCcccccCcC--CC---CcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCC
Q 020319 162 EVAKARDVGVNSVVLFPKVPDALKSPTGDEAYN--DN---GLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 162 ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n--~~---glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.++.+++.|+..|-+|....+. .....++ .+ .-+.++|+.+|+.- +-|..++.-|+|.
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~----~~~~~~~~s~~e~l~~~~~~v~~ak~~G--~~v~~~~~~~~~~----------- 163 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLH----HLEKQLGKTPKEFFTDVSFVIEYAIKSG--LKINVYLEDWSNG----------- 163 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHH----HHHHHTCCCHHHHHHHHHHHHHHHHHTT--CEEEEEEETHHHH-----------
T ss_pred hHHHHHHCCCCEEEEEEecCHH----HHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEEEEEEECCCC-----------
Confidence 7888999999999999754321 1111111 11 23445566666653 3333332212221
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------chHHHHHHHH
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------GRVGAIRAAL 280 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD--------GRV~aIR~aL 280 (327)
+ ..+.+.+.+.+-...++|||.|.-.||.= -.|.++|+.+
T Consensus 164 ~----~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 164 F----RNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp H----HHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHC
T ss_pred C----cCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhc
Confidence 2 23466777777888899999999999753 2566666665
No 238
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=28.20 E-value=54 Score=25.67 Aligned_cols=85 Identities=18% Similarity=0.264 Sum_probs=54.7
Q ss_pred cCCCCcHHHHHHHHHHHCCCeeEEeee-----cccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 193 YNDNGLVPRTIWLLKDRYPDLVIYTDV-----ALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 193 ~n~~glV~rAIr~iK~~fPdl~VitDV-----cLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
-|++-+..+|+++|++. |+++.-|. -|..|...| +-++. .+..+-+..++..+.++++|-+|+=-||
T Consensus 16 Gd~~~lT~~a~~~L~~a--dvv~~~~~~~~~~~l~~~~~~~-~~~~~-----~~~~~~~~~~~~i~~~~~~G~~V~~l~d 87 (117)
T 3hh1_A 16 GNLDDMTFRAVNTLRNA--GAIACEDTRRTSILLKHFGIEG-KRLVS-----YHSFNEERAVRQVIELLEEGSDVALVTD 87 (117)
T ss_dssp SCGGGSCHHHHHHHHHC--SEEEESCHHHHHHHHHHTTCCS-CCEEE-----CCSTTHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCHHHhhHHHHHHHHhC--CEEEEecCchHHHHHHHhCCCC-CEEec-----cCCccHHHHHHHHHHHHHCCCeEEEEec
Confidence 36778999999999998 67766442 233332211 11221 0111223455677788889988877665
Q ss_pred ----CCCchHHHHHHHHHHCCC
Q 020319 268 ----MMDGRVGAIRAALDAEGF 285 (327)
Q Consensus 268 ----MMDGRV~aIR~aLD~~Gf 285 (327)
+|=|+...+.+.|.++|+
T Consensus 88 ~GdP~i~~~~~~l~~~~~~~gi 109 (117)
T 3hh1_A 88 AGTPAISDPGYTMASAAHAAGL 109 (117)
T ss_dssp TTSCGGGSTTHHHHHHHHHTTC
T ss_pred CCcCeEeccHHHHHHHHHHCCC
Confidence 555888888888888887
No 239
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=27.90 E-value=45 Score=31.36 Aligned_cols=20 Identities=25% Similarity=0.292 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHcCCCee
Q 020319 244 TVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 244 Tv~~Lak~Als~A~AGADiV 263 (327)
+++...++|..+.++|||||
T Consensus 31 ~~~~a~~~a~~~v~~GAdII 50 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASML 50 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEE
Confidence 46777789999999999998
No 240
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=27.88 E-value=50 Score=33.47 Aligned_cols=124 Identities=20% Similarity=0.225 Sum_probs=68.1
Q ss_pred eEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCCCCCc
Q 020319 151 YRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGH 229 (327)
Q Consensus 151 ~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YTshGH 229 (327)
+++..+ .+++.++++.+.|...|-| +|..|.. .| .-+.+-|+.||+++| ++ +..-|+|
T Consensus 170 ~~~~~e-~~~~~a~~l~~~Gad~I~L--------~DT~G~~--~P-~~v~~lv~~l~~~~p~~i---------~I~~H~H 228 (539)
T 1rqb_A 170 PVHTVE-GYVKLAGQLLDMGADSIAL--------KDMAALL--KP-QPAYDIIKAIKDTYGQKT---------QINLHCH 228 (539)
T ss_dssp TTCCHH-HHHHHHHHHHHTTCSEEEE--------EETTCCC--CH-HHHHHHHHHHHHHHCTTC---------CEEEEEB
T ss_pred CCCCHH-HHHHHHHHHHHcCCCEEEe--------CCCCCCc--CH-HHHHHHHHHHHHhcCCCc---------eEEEEeC
Confidence 356665 6888888999999886554 3333332 12 245667888888887 43 2344666
Q ss_pred ceeecCCCccccHHHHHHHHHHHHHHHHcCCCee----cCCCCCCch--HHHHHHHHHHCCCC---Cceeeehhhhhh--
Q 020319 230 DGIVREDGVIMNDETVHQLCKQAVSQARAGADVV----SPSDMMDGR--VGAIRAALDAEGFQ---HVSIMSYTAKYA-- 298 (327)
Q Consensus 230 cGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiV----APSDMMDGR--V~aIR~aLD~~Gf~---~v~IMSYSAKyA-- 298 (327)
+- -|. =..-++.-.+||||+| .|=.-.-|. +..+=..|...|+. |..-+.=.++|.
T Consensus 229 nd----~Gl---------AvAN~laAveAGa~~VD~ti~g~GertGN~~lE~lv~~L~~~g~~tgidl~~L~~is~~v~~ 295 (539)
T 1rqb_A 229 ST----TGV---------TEVSLMKAIEAGVDVVDTAISSMSLGPGHNPTESVAEMLEGTGYTTNLDYDRLHKIRDHFKA 295 (539)
T ss_dssp CT----TSC---------HHHHHHHHHHTTCSEEEEBCGGGCSTTSBCBHHHHHHHTTTSSEECCCCHHHHHHHHHHHHH
T ss_pred CC----CCh---------HHHHHHHHHHhCCCEEEEeccccCCCccChhHHHHHHHHHhcCCCchhhHHHHHHHHHHHHH
Confidence 52 231 1124566678999986 222222232 23444566666652 222122222443
Q ss_pred -ccccchhHHH
Q 020319 299 -SSFYGPFREA 308 (327)
Q Consensus 299 -SsfYGPFRdA 308 (327)
...|-||+-.
T Consensus 296 ~~~~~~~~~~~ 306 (539)
T 1rqb_A 296 IRPKYKKFESK 306 (539)
T ss_dssp HGGGGGGGCCS
T ss_pred HhCCCcCCCCC
Confidence 3667777643
No 241
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=27.84 E-value=2.6e+02 Score=28.85 Aligned_cols=122 Identities=18% Similarity=0.160 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCC---CCC----------cccc-----------cCcCCC-C---cHHHHHHHHHHH
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDA---LKS----------PTGD-----------EAYNDN-G---LVPRTIWLLKDR 209 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~---~KD----------~~Gs-----------~A~n~~-g---lV~rAIr~iK~~ 209 (327)
++.+.+..+.++||++|-|=|+.+.. .|+ ..|+ .+.|+. | -+.+.|++++++
T Consensus 254 gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~ 333 (695)
T 3zss_A 254 TAARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKL 333 (695)
T ss_dssp HHGGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHC
Confidence 68888999999999999998864421 111 1221 111211 2 244555555554
Q ss_pred CCCeeEEeeecccCCCCCCccee--------ecCCCc------------------ccc--HHHHHHHHHHHHHHHHcCCC
Q 020319 210 YPDLVIYTDVALDPYSSDGHDGI--------VREDGV------------------IMN--DETVHQLCKQAVSQARAGAD 261 (327)
Q Consensus 210 fPdl~VitDVcLc~YTshGHcGI--------l~~~G~------------------IdN--D~Tv~~Lak~Als~A~AGAD 261 (327)
.|-||-|+-+-. +..|--+ .+++|. .+| .+..+.|.+.+.-..+.|.|
T Consensus 334 --GI~VilD~V~Nh--s~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~~GVD 409 (695)
T 3zss_A 334 --GLEIALDFALQC--SPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMDHGVR 409 (695)
T ss_dssp --TCEEEEEECCEE--CTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred --CCEEEEEeeccC--CccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHHHhCCC
Confidence 799999998762 2222110 011121 235 67777787777777889998
Q ss_pred ee---cCCCCCCchHHHHHHHHHHC
Q 020319 262 VV---SPSDMMDGRVGAIRAALDAE 283 (327)
Q Consensus 262 iV---APSDMMDGRV~aIR~aLD~~ 283 (327)
-+ ++..+-..-...+++++.+.
T Consensus 410 GfRlD~a~~~~~~f~~~~~~~v~~~ 434 (695)
T 3zss_A 410 IFRVDNPHTKPVAFWERVIADINGT 434 (695)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHH
T ss_pred EEEecCcchhhHHHHHHHHHHHHhh
Confidence 76 33333335566777777654
No 242
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=27.76 E-value=61 Score=30.86 Aligned_cols=120 Identities=13% Similarity=0.165 Sum_probs=66.2
Q ss_pred eeEEEeeCCCCcccCCCCCceEecchhhHHHHHHHHHHcC-CCeEEEeecC------CCCCCC-----cccccCcCCCCc
Q 020319 131 YPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVG-VNSVVLFPKV------PDALKS-----PTGDEAYNDNGL 198 (327)
Q Consensus 131 ~PlFV~eg~~~~~I~SMPGv~r~sid~~l~~ev~~~~~lG-I~sVlLFgvi------~~~~KD-----~~Gs~A~n~~gl 198 (327)
.||+|.=.. +. ... ++.+.++.+.+.| +..|.+...+ +.+... ..+...+...-+
T Consensus 194 ~PV~vKi~p---------~~---d~~-~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i 260 (354)
T 4ef8_A 194 HSFGVKMPP---------YF---DFA-HFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYV 260 (354)
T ss_dssp SCEEEEECC---------CC---SHH-HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGG
T ss_pred CCeEEEecC---------CC---CHH-HHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCC
Confidence 499987543 21 222 3566666677887 8888874321 111111 111122222222
Q ss_pred ---HHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeec---------CC
Q 020319 199 ---VPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVS---------PS 266 (327)
Q Consensus 199 ---V~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVA---------PS 266 (327)
--+.|+.||+.++++-||. +|-|.+-+.+ +.+-++|||.|. |
T Consensus 261 ~p~a~~~i~~v~~~~~~ipII~------------------~GGI~s~~da-------~~~l~aGAd~V~vgra~l~~GP- 314 (354)
T 4ef8_A 261 LPTALANINAFYRRCPGKLIFG------------------CGGVYTGEDA-------FLHVLAGASMVQVGTALQEEGP- 314 (354)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEE------------------ESCCCSHHHH-------HHHHHHTEEEEEECHHHHHHCT-
T ss_pred chHHHHHHHHHHHhCCCCCEEE------------------ECCcCCHHHH-------HHHHHcCCCEEEEhHHHHHhCH-
Confidence 2456777888887877775 2556654433 333458999885 5
Q ss_pred CCCCchHHHHHHHHHHCCCCCce
Q 020319 267 DMMDGRVGAIRAALDAEGFQHVS 289 (327)
Q Consensus 267 DMMDGRV~aIR~aLD~~Gf~~v~ 289 (327)
....--...+++.|++.||.++.
T Consensus 315 ~~~~~i~~~l~~~m~~~G~~si~ 337 (354)
T 4ef8_A 315 SIFERLTSELLGVMAKKRYQTLD 337 (354)
T ss_dssp THHHHHHHHHHHHHHHHTCCSGG
T ss_pred HHHHHHHHHHHHHHHHcCCCCHH
Confidence 23333345566778888997654
No 243
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=27.76 E-value=1e+02 Score=27.91 Aligned_cols=91 Identities=15% Similarity=0.160 Sum_probs=56.2
Q ss_pred HHHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------
Q 020319 201 RTIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-------- 270 (327)
Q Consensus 201 rAIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD-------- 270 (327)
...+.|.+..|+ ++-++|..-.||-. -..++-.+++.+.+-.+.++|||.|.=..--+
T Consensus 38 tv~~~i~~~~P~~~~iy~~D~~~~pyG~------------~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas~~~l~~l 105 (290)
T 2vvt_A 38 TVLKEALKQLPNERLIYLGDTARCPYGP------------RPAEQVVQFTWEMADFLLKKRIKMLVIACNTATAVALEEI 105 (290)
T ss_dssp HHHHHHHHHCTTSCEEEEECTTTCCCTT------------SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCccEEEecccccCCCCC------------CCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchhHHHHHHH
Confidence 478889999995 44458988888821 12233334444444445667888875332222
Q ss_pred ---------c-hHHHHHHHHHHCCCCCceeeehhhhhhccccc
Q 020319 271 ---------G-RVGAIRAALDAEGFQHVSIMSYTAKYASSFYG 303 (327)
Q Consensus 271 ---------G-RV~aIR~aLD~~Gf~~v~IMSYSAKyASsfYG 303 (327)
| -..+++.++...+-.+|+||+=.+...|.+|-
T Consensus 106 r~~~~iPVigiiepa~~~A~~~~~~~rIgVLaT~~T~~s~~y~ 148 (290)
T 2vvt_A 106 KAALPIPVVGVILPGARAAVKVTKNNKIGVIGTLGTIKSASYE 148 (290)
T ss_dssp HHHCSSCEEESSHHHHHHHHHHCSSSEEEEEECHHHHHTTHHH
T ss_pred HHhCCCCEEcccHHHHHHHHHhcCCCEEEEEeCcHhhhhHHHH
Confidence 2 23455666655667789999877777776643
No 244
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=27.69 E-value=87 Score=27.70 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
.+...++.+.+.|.++|.+.-.+.. +.+++.|.+.||++.|+|+. +|+
T Consensus 138 T~~~ai~~L~~~G~~~I~~~~lv~~-----------------~~g~~~l~~~~p~v~I~t~~-iD~ 185 (208)
T 1v9s_A 138 SASLALSLLKERGATGVKLMAILAA-----------------PEGLERIAKDHPDTEVVVAA-IDE 185 (208)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEEC-----------------HHHHHHHHHHCTTCEEEEEE-ECS
T ss_pred HHHHHHHHHHHcCCCEEEEEEEEeC-----------------HHHHHHHHHHCCCcEEEEEe-ecC
Confidence 3788889999999998887654321 46899999999999999874 443
No 245
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=27.26 E-value=44 Score=27.89 Aligned_cols=47 Identities=21% Similarity=0.304 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHH---HHHHHCCCCCceeee
Q 020319 243 ETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIR---AALDAEGFQHVSIMS 292 (327)
Q Consensus 243 ~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR---~aLD~~Gf~~v~IMS 292 (327)
.+.+.+.+.+. +.++|+|+=|-+|......++ +.|.+.|..++.||-
T Consensus 56 ~p~e~lv~aa~---~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~v 105 (161)
T 2yxb_A 56 QTPEQVAMAAV---QEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVL 105 (161)
T ss_dssp CCHHHHHHHHH---HTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred CCHHHHHHHHH---hcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 46666666554 459999999999998665555 577788886777663
No 246
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=27.20 E-value=69 Score=29.90 Aligned_cols=91 Identities=13% Similarity=0.059 Sum_probs=50.2
Q ss_pred HcCCCeEEEeecCCCC-CCCcccccCcCCCC---cHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCccccHH
Q 020319 168 DVGVNSVVLFPKVPDA-LKSPTGDEAYNDNG---LVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDE 243 (327)
Q Consensus 168 ~lGI~sVlLFgvi~~~-~KD~~Gs~A~n~~g---lV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~IdND~ 243 (327)
..|+..|-+|.-..+. .+-..+ .+.+. .+.++|+..|+..-+ |. .-||| .+..
T Consensus 92 ~ag~~~v~i~~s~Sd~~~~~~l~---~s~~e~l~~~~~~v~~a~~~g~~--v~---f~~~d-----------~~~~---- 148 (325)
T 3eeg_A 92 FAKRSRIHTGIGSSDIHIEHKLR---STRENILEMAVAAVKQAKKVVHE--VE---FFCED-----------AGRA---- 148 (325)
T ss_dssp TCSSEEEEEEEECSHHHHC-------CCCTTGGGTTHHHHHHHHTTSSE--EE---EEEET-----------GGGS----
T ss_pred ccCCCEEEEEecccHHHHHHHhC---CCHHHHHHHHHHHHHHHHHCCCE--EE---EEccc-----------cccc----
Confidence 3499999999764431 111111 11222 244567777765322 21 11332 1332
Q ss_pred HHHHHHHHHHHHHHcCCCeecCCCCCC--------chHHHHHHHHH
Q 020319 244 TVHQLCKQAVSQARAGADVVSPSDMMD--------GRVGAIRAALD 281 (327)
Q Consensus 244 Tv~~Lak~Als~A~AGADiVAPSDMMD--------GRV~aIR~aLD 281 (327)
+.+.+.+.+-...++|||+|+-.||.= -.|.++|+.+.
T Consensus 149 ~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 149 DQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVS 194 (325)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCC
Confidence 345666666677789999999999864 24555666553
No 247
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=27.01 E-value=3.4e+02 Score=24.26 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCC--eeEEeeecccCCCCCCcceeecC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~ 235 (327)
.-+.|+++ ++.|-..|-+--.+. ..|+ .....+.+-|+.+++..++ |=|| + |
T Consensus 68 ~k~~E~~~-i~~GAdEID~Vinig-~~~~-------g~~~~v~~ei~~v~~a~~~~~lKvI----------------l-E 121 (226)
T 1vcv_A 68 SRIALVSR-LAEVADEIDVVAPIG-LVKS-------RRWAEVRRDLISVVGAAGGRVVKVI----------------T-E 121 (226)
T ss_dssp HHHHHHHH-HTTTCSEEEEECCHH-HHHT-------TCHHHHHHHHHHHHHHTTTSEEEEE----------------C-C
T ss_pred HHHHHHHH-HHCCCCEEEEecchh-hhcC-------CCHHHHHHHHHHHHHHHcCCCceEE----------------E-e
Confidence 36788999 999999986632222 1221 1225678889999988543 2222 2 4
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCC-CC----------Cc-----hHHHHHHHHHHCCCCCceee
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSD-MM----------DG-----RVGAIRAALDAEGFQHVSIM 291 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD-MM----------DG-----RV~aIR~aLD~~Gf~~v~IM 291 (327)
.+.. +|+-+...++.|. +||||+|=-|- -- -| -|..+|+..++.|. +++|-
T Consensus 122 t~~L-t~eei~~a~~ia~---eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~-~v~vK 188 (226)
T 1vcv_A 122 EPYL-RDEERYTLYDIIA---EAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGY-RLGVK 188 (226)
T ss_dssp GGGC-CHHHHHHHHHHHH---HHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTC-CCEEE
T ss_pred ccCC-CHHHHHHHHHHHH---HcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCC-CceEE
Confidence 4444 3665666666654 89999999883 22 25 78888888777663 45554
No 248
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=26.89 E-value=1.9e+02 Score=25.11 Aligned_cols=83 Identities=22% Similarity=0.252 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCC-CeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fP-dl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
++.+.++.+.+.|+..| .+. +|- ...|.-.+.++.+|+..+ ++-|++ .
T Consensus 133 ~~~~~a~~a~eaGad~I----~ts------tg~---~~gga~~~~i~~v~~~v~~~ipVia------------------~ 181 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFI----KTS------TGF---APRGTTLEEVRLIKSSAKGRIKVKA------------------S 181 (225)
T ss_dssp HHHHHHHHHHHHTCSEE----ECC------CSC---SSSCCCHHHHHHHHHHHTTSSEEEE------------------E
T ss_pred HHHHHHHHHHHhCCCEE----EEC------CCC---CCCCCCHHHHHHHHHHhCCCCcEEE------------------E
Confidence 47778888999999988 222 121 123456689999998753 344443 3
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHC
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAE 283 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~ 283 (327)
|-|.+- +.|+..-++|||.|.-|- -..|-+.|+..
T Consensus 182 GGI~t~-------~da~~~l~aGA~~iG~s~-----~~~i~~~~~~~ 216 (225)
T 1mzh_A 182 GGIRDL-------ETAISMIEAGADRIGTSS-----GISIAEEFLKR 216 (225)
T ss_dssp SSCCSH-------HHHHHHHHTTCSEEEESC-----HHHHHHHHHHH
T ss_pred CCCCCH-------HHHHHHHHhCchHHHHcc-----HHHHHHHHHhc
Confidence 666653 344555579999888773 23455555543
No 249
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=26.86 E-value=32 Score=31.30 Aligned_cols=48 Identities=15% Similarity=0.258 Sum_probs=26.4
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY 210 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f 210 (327)
..+.++.+.+.|...|.+.-.+|...+...|+.-.+ ....|+.|++.+
T Consensus 30 ~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~----~~~~i~~I~~~~ 77 (305)
T 2nv1_A 30 NAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMA----DPTIVEEVMNAV 77 (305)
T ss_dssp SHHHHHHHHHTTCSEEEECCC-------CCCCCCCC----CHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCC----CHHHHHHHHHhC
Confidence 578888999999999955431232223223322111 146777888776
No 250
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=26.85 E-value=86 Score=27.67 Aligned_cols=87 Identities=14% Similarity=0.098 Sum_probs=54.3
Q ss_pred cCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc-cc-cHHHHHHHHHHHHHHHHcCCCeecCC---C
Q 020319 193 YNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV-IM-NDETVHQLCKQAVSQARAGADVVSPS---D 267 (327)
Q Consensus 193 ~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~-Id-ND~Tv~~Lak~Als~A~AGADiVAPS---D 267 (327)
-|++.+..+|+++|++. |+++..|- +++.-.-..+..+.. +. ...+.+..++..+.++++|-+|+=-+ =
T Consensus 15 G~~~~lT~~A~~~L~~a--dvv~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~V~~l~~GDP 88 (253)
T 4e16_A 15 GDKELITLKGYKLLSNA--DVVIYAGS----LVNPELLEYCKEDCQIHNSAHMDLQEIIDVMREGIENNKSVVRLQTGDF 88 (253)
T ss_dssp SCGGGSCHHHHHHHHHC--SEEEECTT----TSCGGGGGGSCTTCEEEEGGGCCHHHHHHHHHHHHHTTCCEEEEESBCT
T ss_pred CCHHHHHHHHHHHHHhC--CEEEEeCC----CCCHHHHhhcCCCCEEEecCCCCHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 56788999999999998 66666442 111100001111111 11 13345667778888899998775433 2
Q ss_pred CCCchHHHHHHHHHHCCC
Q 020319 268 MMDGRVGAIRAALDAEGF 285 (327)
Q Consensus 268 MMDGRV~aIR~aLD~~Gf 285 (327)
+.=|+...+.+.|.++|+
T Consensus 89 ~i~~~~~~l~~~l~~~gi 106 (253)
T 4e16_A 89 SIYGSIREQVEDLNKLNI 106 (253)
T ss_dssp TTTCCHHHHHHHHHHHTC
T ss_pred ccccCHHHHHHHHHHCCC
Confidence 445888889999998887
No 251
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=26.57 E-value=3.5e+02 Score=25.06 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=47.0
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEe-ecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCccee
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLF-PKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGI 232 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLF-gvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGI 232 (327)
+++ +.++.++.+.+.|+..|-+. |...+ .+ .....+.-...++.||+.+ ++-||+
T Consensus 227 ~~~-~~~~la~~L~~~Gvd~i~vs~g~~~~-~~------~~~~~~~~~~~~~~ik~~~-~iPVi~--------------- 282 (340)
T 3gr7_A 227 TAK-DYVPYAKRMKEQGVDLVDVSSGAIVP-AR------MNVYPGYQVPFAELIRREA-DIPTGA--------------- 282 (340)
T ss_dssp CGG-GHHHHHHHHHHTTCCEEEEECCCSSC-CC------CCCCTTTTHHHHHHHHHHT-TCCEEE---------------
T ss_pred CHH-HHHHHHHHHHHcCCCEEEEecCCccC-CC------CCCCccccHHHHHHHHHHc-CCcEEe---------------
Confidence 454 58889999999999998886 32111 00 0112333456788899987 444443
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcC-CCeec
Q 020319 233 VREDGVIMNDETVHQLCKQAVSQARAG-ADVVS 264 (327)
Q Consensus 233 l~~~G~IdND~Tv~~Lak~Als~A~AG-ADiVA 264 (327)
.|.|.+-+..+ ..-++| ||.|+
T Consensus 283 ---~GgI~s~e~a~-------~~L~~G~aD~V~ 305 (340)
T 3gr7_A 283 ---VGLITSGWQAE-------EILQNGRADLVF 305 (340)
T ss_dssp ---ESSCCCHHHHH-------HHHHTTSCSEEE
T ss_pred ---eCCCCCHHHHH-------HHHHCCCeeEEE
Confidence 25565544433 344577 99986
No 252
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=26.45 E-value=26 Score=33.28 Aligned_cols=22 Identities=23% Similarity=0.305 Sum_probs=19.4
Q ss_pred HHHHHHHHHHCCC--CCceeeehh
Q 020319 273 VGAIRAALDAEGF--QHVSIMSYT 294 (327)
Q Consensus 273 V~aIR~aLD~~Gf--~~v~IMSYS 294 (327)
+.+||+-|+++|| .+|+||.-+
T Consensus 43 ~~~iR~ff~~~gF~EVeTPiL~~~ 66 (345)
T 3a5y_A 43 MAEIRRFFADRGVLEVETPCMSQA 66 (345)
T ss_dssp HHHHHHHHHHTTCEECCCCSEESS
T ss_pred HHHHHHHHHHCCCEEEECCEEEec
Confidence 6789999999999 699999853
No 253
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=26.39 E-value=1.1e+02 Score=27.80 Aligned_cols=85 Identities=15% Similarity=0.079 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCC--CCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDA--LKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~--~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~ 235 (327)
.+.+.++.+.+. ...|-|-.--|.. .+|..|+.-.+.--++.+.|+++++..+ +-|...+.+ |+.
T Consensus 72 ~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~---------G~~-- 138 (318)
T 1vhn_A 72 ELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS-GKFSVKTRL---------GWE-- 138 (318)
T ss_dssp HHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCS-SEEEEEEES---------CSS--
T ss_pred HHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhC-CCEEEEecC---------CCC--
Confidence 477777778888 8998884322432 2477888777777889999999999986 667777765 222
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeec
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVS 264 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVA 264 (327)
.++++ +.|....++|+|.|.
T Consensus 139 -----~~~~~----~~a~~l~~~G~d~i~ 158 (318)
T 1vhn_A 139 -----KNEVE----EIYRILVEEGVDEVF 158 (318)
T ss_dssp -----SCCHH----HHHHHHHHTTCCEEE
T ss_pred -----hHHHH----HHHHHHHHhCCCEEE
Confidence 22233 345556788999884
No 254
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=26.29 E-value=1.9e+02 Score=28.89 Aligned_cols=139 Identities=14% Similarity=0.121 Sum_probs=69.1
Q ss_pred CCCCceeeEEEeeCCC-CcccCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHH
Q 020319 125 SPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTI 203 (327)
Q Consensus 125 s~~dLI~PlFV~eg~~-~~~I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAI 203 (327)
..-|..+||.+.-... -.+ + .+.+.++++.+.|+-.|.|=-.+...+| +|-.+-.+=-++..++
T Consensus 147 ~~~d~~lPviaD~DtGyG~~-----------~--~v~~tv~~~~~aGaaGi~IEDq~~~~Kk--CGh~~gk~lv~~~e~~ 211 (435)
T 3lg3_A 147 GYTDYFLPIVADAEAGFGGV-----------L--NAFELMKAMIEAGAAGVHFEDQLAAVKK--CGHMGGKVLVPTQEAI 211 (435)
T ss_dssp TCCCCCCCEEEECTTCSSSH-----------H--HHHHHHHHHHHHTCSEEEEESBCGGGCB--CSTTCBCEECCHHHHH
T ss_pred ccccCCCCeEEECCCCCCCc-----------H--HHHHHHHHHHHcCCEEEEEecCCCCccc--cCCCCCCeecCHHHHH
Confidence 3456678986653222 122 1 2567788999999999988432210112 2322211112333333
Q ss_pred H---HHHHH----CCCeeEEeeec----------ccCCCCCCcceeec---CCCccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 204 W---LLKDR----YPDLVIYTDVA----------LDPYSSDGHDGIVR---EDGVIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 204 r---~iK~~----fPdl~VitDVc----------Lc~YTshGHcGIl~---~~G~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
. +.++. -++++|++=+- .||+ + |.=|+. .+|...-...++.-.+-|..|++ |||+|
T Consensus 212 ~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s~~d~r-D--~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~i 287 (435)
T 3lg3_A 212 QKLVAARLAADVLGVPTLLIARTDADAADLLTSDCDPY-D--REFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLV 287 (435)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCGG-G--GGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEE
T ss_pred HHHHHHHHHHHhcCCCeEEEEEcCCccccccccccccc-c--chhhcccccccccccccCCHHHHHHHHHHHHc-cCCEE
Confidence 3 33322 47888885332 1221 1 111111 11111111234444456778998 99999
Q ss_pred cC-CCCCC-chHHHHHHHHHH
Q 020319 264 SP-SDMMD-GRVGAIRAALDA 282 (327)
Q Consensus 264 AP-SDMMD-GRV~aIR~aLD~ 282 (327)
=+ +..-| ..+.++.++++.
T Consensus 288 f~E~~~~~~~ei~~f~~~v~~ 308 (435)
T 3lg3_A 288 WCETSTPDLALAKRFADAVHA 308 (435)
T ss_dssp EECCSSCCHHHHHHHHHHHHH
T ss_pred EecCCCCCHHHHHHHHHHhcc
Confidence 77 33324 446777777764
No 255
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=26.25 E-value=46 Score=30.56 Aligned_cols=95 Identities=16% Similarity=0.227 Sum_probs=55.0
Q ss_pred CcHHHHHHHHHHHCC-CeeEEeeecccCCCCC----------CcceeecCCCccccHHHHHH--------HHHHHHHHHH
Q 020319 197 GLVPRTIWLLKDRYP-DLVIYTDVALDPYSSD----------GHDGIVREDGVIMNDETVHQ--------LCKQAVSQAR 257 (327)
Q Consensus 197 glV~rAIr~iK~~fP-dl~VitDVcLc~YTsh----------GHcGIl~~~G~IdND~Tv~~--------Lak~Als~A~ 257 (327)
..+-++++.++++++ +..|+. .|-.|||.- |+..+.. .-..+.+.++. +.+.+..+.+
T Consensus 122 ~~v~eai~~l~~~~~~~~plig-~~~~P~tla~~l~~g~~~~~~~~~~~--~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~ 198 (354)
T 3cyv_A 122 GYVMNAVRTIRHELKGEVPLIG-FSGSPWTLATYMVEGGSSKAFTVIKK--MMYADPQALHALLDKLAKSVTLYLNAQIK 198 (354)
T ss_dssp HHHHHHHHHHHHHTTTSSCEEE-EEECHHHHHHHHHHSSCCSSCHHHHH--HHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeeEEE-eCCcHHHHHHHHhCCCCCccHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357889999999986 555554 456677643 2221111 12234444433 3346667789
Q ss_pred cCCCeecCCCCCCchHH----------HHHHHHHHCCCC----Cceeeehh
Q 020319 258 AGADVVSPSDMMDGRVG----------AIRAALDAEGFQ----HVSIMSYT 294 (327)
Q Consensus 258 AGADiVAPSDMMDGRV~----------aIR~aLD~~Gf~----~v~IMSYS 294 (327)
||||+|.=.|.+-|.+. .+++.++.-.=. ++.|+-++
T Consensus 199 aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~ 249 (354)
T 3cyv_A 199 AGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFT 249 (354)
T ss_dssp TTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEEC
T ss_pred hCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEC
Confidence 99999987776656543 355556554211 35655554
No 256
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=26.24 E-value=2e+02 Score=27.19 Aligned_cols=44 Identities=18% Similarity=0.294 Sum_probs=29.0
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
.+.++.+++.|+..|.|-- . .| ++ ..+.+.|+.+|+.+ ++.|+.
T Consensus 107 ~e~a~~l~eaGad~I~ld~--a------~G----~~-~~~~~~i~~i~~~~-~~~Viv 150 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDS--A------HG----HS-LNIIRTLKEIKSKM-NIDVIV 150 (361)
T ss_dssp HHHHHHHHHTTCSEEEECC--S------CC----SB-HHHHHHHHHHHHHC-CCEEEE
T ss_pred HHHHHHHHHcCcCeEEEeC--C------CC----Cc-HHHHHHHHHHHHhc-CCcEEE
Confidence 5678889999999766521 1 11 11 24567899999998 555554
No 257
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=25.93 E-value=3.1e+02 Score=25.69 Aligned_cols=44 Identities=14% Similarity=0.228 Sum_probs=28.5
Q ss_pred HHHHHHHHHc--CCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEE
Q 020319 160 VQEVAKARDV--GVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIY 216 (327)
Q Consensus 160 ~~ev~~~~~l--GI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vi 216 (327)
.+.++.+++. |+..+.+.- . .| ++ -.+.+.|+.||+.+|++.|+
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~--~------~g----~~-~~~~~~i~~lr~~~~~~~vi 165 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDV--A------NG----YS-EHFVEFVKDVRKRFPQHTIM 165 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEEC--S------CT----TB-HHHHHHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHhccCCCCEEEEEe--c------CC----Cc-HHHHHHHHHHHHhcCCCeEE
Confidence 5667777776 888665421 1 01 11 13567899999999887666
No 258
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=25.82 E-value=1.9e+02 Score=28.84 Aligned_cols=121 Identities=12% Similarity=0.041 Sum_probs=57.5
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHH---HH----CCCeeEEe--eecccCCCC---
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLK---DR----YPDLVIYT--DVALDPYSS--- 226 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK---~~----fPdl~Vit--DVcLc~YTs--- 226 (327)
+.+.++++.+.|+-.|-|=--+...+| +|-.+-..==++...+..|| ++ -++++|++ |..-...++
T Consensus 162 v~rtVk~~~~AGaAGi~IEDQ~~~~Kk--CGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~ 239 (433)
T 3eol_A 162 AFEIMKAYIEAGAAGVHFEDQLASEKK--CGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDI 239 (433)
T ss_dssp HHHHHHHHHHHTCSEEEEESBCC-----------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCC
T ss_pred HHHHHHHHHHcCCeEEEEecCCCCCCc--CCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCc
Confidence 677888999999999988433221122 23222111123444444443 22 47888885 432211100
Q ss_pred --CCcceee-----cCCCccccHHHHHHHHHHHHHHHHcCCCeecC-CCCCC-chHHHHHHHHHH
Q 020319 227 --DGHDGIV-----REDGVIMNDETVHQLCKQAVSQARAGADVVSP-SDMMD-GRVGAIRAALDA 282 (327)
Q Consensus 227 --hGHcGIl-----~~~G~IdND~Tv~~Lak~Als~A~AGADiVAP-SDMMD-GRV~aIR~aLD~ 282 (327)
--|.-|+ ..+|...-...++.-.+-|..|++ |||+|=+ +..-| ..+..+.++++.
T Consensus 240 d~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~ 303 (433)
T 3eol_A 240 DERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHK 303 (433)
T ss_dssp STTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred ccccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcc
Confidence 0111111 001111111224444456778998 9999977 33223 456666666654
No 259
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=25.80 E-value=2.9e+02 Score=23.94 Aligned_cols=82 Identities=23% Similarity=0.257 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCCc
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G~ 238 (327)
.+.+++++.+.|...|-+.-.+.. .|+. ..+.+.+-|+.+++..+.+.| -+ |+ +.+.
T Consensus 72 k~~~~~~A~~~Gad~Id~viN~g~-~~~~-------~~~~~~~~i~~v~~a~~pv~v----Kv----------i~-e~~~ 128 (225)
T 1mzh_A 72 KVKEAVEAVRDGAQELDIVWNLSA-FKSE-------KYDFVVEELKEIFRETPSAVH----KV----------IV-ETPY 128 (225)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHH-HHTT-------CHHHHHHHHHHHHHTCTTSEE----EE----------EC-CGGG
T ss_pred hHHHHHHHHHcCCCEEEEEecHHH-HhcC-------ChHHHHHHHHHHHHHhcCceE----EE----------EE-eCCC
Confidence 567888999999999886322221 2221 113566678899887643322 11 22 1222
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 020319 239 IMNDETVHQLCKQAVSQARAGADVVSPSD 267 (327)
Q Consensus 239 IdND~Tv~~Lak~Als~A~AGADiVAPSD 267 (327)
.+ ++.+. +.|-...++|||.|--|-
T Consensus 129 l~-~~~~~---~~a~~a~eaGad~I~tst 153 (225)
T 1mzh_A 129 LN-EEEIK---KAVEICIEAGADFIKTST 153 (225)
T ss_dssp CC-HHHHH---HHHHHHHHHTCSEEECCC
T ss_pred CC-HHHHH---HHHHHHHHhCCCEEEECC
Confidence 32 33344 444455789999998775
No 260
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=25.71 E-value=1.6e+02 Score=29.85 Aligned_cols=22 Identities=27% Similarity=0.477 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeec
Q 020319 158 GLVQEVAKARDVGVNSVVLFPK 179 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgv 179 (327)
.+++.+..|.+|||++|=|-|+
T Consensus 287 ~~ie~L~yLk~LGVtaveLmPv 308 (884)
T 4aio_A 287 AGMEHLRKLSDAGLTHVHLLPS 308 (884)
T ss_dssp HHHHHHHHHHHHTCCEEEECCC
T ss_pred hHHHHhHHHHHcCCCEEEeccc
Confidence 3688899999999999999775
No 261
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=25.53 E-value=81 Score=27.61 Aligned_cols=52 Identities=21% Similarity=0.451 Sum_probs=37.1
Q ss_pred cCCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 144 IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 144 I~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
+..+||+ . -.+|+.++.+.|...|.+||. . ..| | ...++.++..+|++-+++
T Consensus 110 ~~~i~G~-----~--t~~e~~~A~~~Gad~v~~Fpa-~-----~~g-------G--~~~lk~i~~~~~~ipvva 161 (214)
T 1wbh_A 110 IPLIPGI-----S--TVSELMLGMDYGLKEFKFFPA-E-----ANG-------G--VKALQAIAGPFSQVRFCP 161 (214)
T ss_dssp SCEEEEE-----S--SHHHHHHHHHTTCCEEEETTT-T-----TTT-------H--HHHHHHHHTTCTTCEEEE
T ss_pred CCEEEec-----C--CHHHHHHHHHCCCCEEEEecC-c-----ccc-------C--HHHHHHHhhhCCCCeEEE
Confidence 4556663 2 167788999999999999982 1 010 1 568999999999877654
No 262
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=25.50 E-value=91 Score=34.25 Aligned_cols=70 Identities=17% Similarity=0.145 Sum_probs=45.1
Q ss_pred EecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCC-----cccccCcCC-------------CCc---HHHHHHHHHHHC
Q 020319 152 RLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKS-----PTGDEAYND-------------NGL---VPRTIWLLKDRY 210 (327)
Q Consensus 152 r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD-----~~Gs~A~n~-------------~gl---V~rAIr~iK~~f 210 (327)
+.... .|.+.+..|.+|||.+|-|=|+... ..+ ......|+. -|- +.+.|++++++
T Consensus 682 ~gt~~-gi~~kldyLk~LGVtaIwL~Pi~~~-~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~- 758 (1039)
T 3klk_A 682 ERTNV-RIAQNADLFKSWGITTFELAPQYNS-SKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKA- 758 (1039)
T ss_dssp GCHHH-HHHHTHHHHHHTTCCEEECCCCSCB-CCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHT-
T ss_pred CCCHH-HHHHHHHHHHHcCCCEEEECccccC-CcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHC-
Confidence 44554 6999999999999999999886432 111 112222221 133 45556666655
Q ss_pred CCeeEEeeecccCCC
Q 020319 211 PDLVIYTDVALDPYS 225 (327)
Q Consensus 211 Pdl~VitDVcLc~YT 225 (327)
.|-||.||-+.+-.
T Consensus 759 -GI~VIlDvV~NHta 772 (1039)
T 3klk_A 759 -GLQAIADWVPDQIY 772 (1039)
T ss_dssp -TCEEEEEECCSEEC
T ss_pred -CCEEEEEEccCCcC
Confidence 79999999987643
No 263
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=25.44 E-value=4.3e+02 Score=28.12 Aligned_cols=122 Identities=13% Similarity=0.150 Sum_probs=69.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCC---CCCCc----------cc-ccCcCCCCc--------------------HHHHH
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPD---ALKSP----------TG-DEAYNDNGL--------------------VPRTI 203 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~---~~KD~----------~G-s~A~n~~gl--------------------V~rAI 203 (327)
++.+.+..+.++||++|-|-|+-+- ..+.. .+ +..|++-+. ..+.|
T Consensus 297 gl~~~L~yLk~LGvtaV~L~Pi~~~~~~~e~~~~~~~~~~~~~~~ynwGY~~~~~~a~~~~yGt~p~~~~~~~~efk~lV 376 (877)
T 3faw_A 297 AFSEKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNWGYDPQSYFALSGMYSEKPKDPSARIAELKQLI 376 (877)
T ss_dssp HHGGGHHHHHHHTCSEEEESCCBCBSSCBTTCCCCCCSCCSSSCSCCCSCSBSCSSSBCSTTCSCTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcchhcccccccccccccccccCCCCCCccCcCcCccccccccccCCCCCcchHHHHHHHHH
Confidence 5888899999999999999886430 00100 00 122322221 44555
Q ss_pred HHHHHHCCCeeEEeeecccCCCCCCcc------e---eecCCCc-----------cccHHHHHHHHHHHHHHHH-cCCCe
Q 020319 204 WLLKDRYPDLVIYTDVALDPYSSDGHD------G---IVREDGV-----------IMNDETVHQLCKQAVSQAR-AGADV 262 (327)
Q Consensus 204 r~iK~~fPdl~VitDVcLc~YTshGHc------G---Il~~~G~-----------IdND~Tv~~Lak~Als~A~-AGADi 262 (327)
++++++ .|-||-||-+-.-.. +|. + ..+.+|. ..|....+.|.....-.++ .|+|-
T Consensus 377 ~~~H~~--GI~VILDvV~NH~a~-~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e~gVDG 453 (877)
T 3faw_A 377 HDIHKR--GMGVILDVVYNHTAK-TYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSEFKVDG 453 (877)
T ss_dssp HHHHHT--TCEEEEEECTTCCSC-THHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHc--CCEEEEEEeeccccC-ccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHHHcCCcE
Confidence 566555 799999998753221 110 0 0111222 2456667777777777777 69987
Q ss_pred ec---CCCCCCchHHHHHHHHHH
Q 020319 263 VS---PSDMMDGRVGAIRAALDA 282 (327)
Q Consensus 263 VA---PSDMMDGRV~aIR~aLD~ 282 (327)
+= +..|--..+..++.++.+
T Consensus 454 FRfD~a~~~~~~~~~~~~~~~~~ 476 (877)
T 3faw_A 454 FRFDMMGDHDAAAIELAYKEAKA 476 (877)
T ss_dssp EEETTGGGSBHHHHHHHHHHHHH
T ss_pred EEEecCCcCCHHHHHHHHHHHHh
Confidence 63 222222445666666655
No 264
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=25.42 E-value=93 Score=30.71 Aligned_cols=122 Identities=14% Similarity=0.176 Sum_probs=74.9
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCC---------c---HHHHHHHHHHHCCCeeEEeeecc
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNG---------L---VPRTIWLLKDRYPDLVIYTDVAL 221 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~g---------l---V~rAIr~iK~~fPdl~VitDVcL 221 (327)
.+. ++.+.+.-+.++||++|-|=|+.+.. .+..|++-+ - ..+.|++++++ .|-||-|+-+
T Consensus 171 ~~~-gi~~~LdyLk~LGvt~I~L~Pi~~~~-----~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~--Gi~VilD~V~ 242 (585)
T 1wzl_A 171 DLK-GVIDRLPYLEELGVTALYFTPIFASP-----SHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRR--GIKIILDAVF 242 (585)
T ss_dssp CHH-HHHHTHHHHHHHTCCEEEECCCEECS-----SSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTT--TCEEEEEECC
T ss_pred CHH-HHHHHhHHHHHcCCCEEEECCcccCC-----CCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEcC
Confidence 353 68888999999999999998864321 122343332 2 33344444443 7999999977
Q ss_pred cCCCCCCcc-------e---------eecC--------------C-C-------ccccHHHHHHHHHHHHHHHHcCCCee
Q 020319 222 DPYSSDGHD-------G---------IVRE--------------D-G-------VIMNDETVHQLCKQAVSQARAGADVV 263 (327)
Q Consensus 222 c~YTshGHc-------G---------Il~~--------------~-G-------~IdND~Tv~~Lak~Als~A~AGADiV 263 (327)
.......+- | ..++ . + .-.|.+..+.|.+.+.-..+-|+|-+
T Consensus 243 NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl~~gvDGf 322 (585)
T 1wzl_A 243 NHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDGW 322 (585)
T ss_dssp SBCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CcCCCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHHHhCCCeEE
Confidence 544332220 0 0000 0 0 12477788888888888889999854
Q ss_pred ---cCCCCCCchHHHHHHHHHHC
Q 020319 264 ---SPSDMMDGRVGAIRAALDAE 283 (327)
Q Consensus 264 ---APSDMMDGRV~aIR~aLD~~ 283 (327)
+.+.+-..-+..+|+++++.
T Consensus 323 R~D~a~~~~~~f~~~~~~~v~~~ 345 (585)
T 1wzl_A 323 RLDVANEVDHAFWREFRRLVKSL 345 (585)
T ss_dssp EETTGGGSCHHHHHHHHHHHHHH
T ss_pred EEeccccCCHHHHHHHHHHHHHH
Confidence 33333335678899999875
No 265
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=25.37 E-value=38 Score=29.80 Aligned_cols=30 Identities=27% Similarity=0.333 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCCeecC----CC-CCCchHH
Q 020319 245 VHQLCKQAVSQARAGADVVSP----SD-MMDGRVG 274 (327)
Q Consensus 245 v~~Lak~Als~A~AGADiVAP----SD-MMDGRV~ 274 (327)
++.+.+.+....++|||+|== || +|||-+-
T Consensus 31 ~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i 65 (262)
T 1rd5_A 31 LATTAEALRLLDGCGADVIELGVPCSDPYIDGPII 65 (262)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHH
Confidence 355666777888999999743 44 8998663
No 266
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=25.34 E-value=1.2e+02 Score=26.73 Aligned_cols=48 Identities=23% Similarity=0.450 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~ 223 (327)
.+...++.+.+.|.++|.+.-.+.. +.+++.|.+.||++.|+|. ++|+
T Consensus 138 T~~~ai~~L~~~G~~~I~~~~lv~~-----------------p~g~~~l~~~~p~v~I~t~-~iD~ 185 (208)
T 2ehj_A 138 SVIATIDLLKKAGCSSIKVLVLVAA-----------------PEGIAALEKAHPDVELYTA-SIDQ 185 (208)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEEC-----------------HHHHHHHHHHCTTSEEEES-CBCS
T ss_pred HHHHHHHHHHHcCCCEEEEEEEEeC-----------------HHHHHHHHHHCCCcEEEEE-ecCC
Confidence 3788889999999999888654321 4578999999999998886 4444
No 267
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=25.33 E-value=4e+02 Score=25.04 Aligned_cols=114 Identities=12% Similarity=0.069 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCC-CCCC-------
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPY-SSDG------- 228 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~Y-TshG------- 228 (327)
++.++++++++.|.+.+.|.. +... ..+.+ --.+-|+++++.+ |++-++.|.. +.| |-.-
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k-~g~~--------~~~~~-~d~e~v~avR~a~G~d~~l~vDaN-~~~~~~~~A~~~~~~ 228 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCV-PIKA--------DWSTK-EVAYYLRELRGILGHDTDMMVDYL-YRFTDWYEVARLLNS 228 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC-CTTC--------CCCHH-HHHHHHHHHHHHHCSSSEEEEECT-TCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCc-cCCC--------ccCHH-HHHHHHHHHHHHhCCCCeEEEeCC-CCCCCHHHHHHHHHH
Confidence 355688889999999999841 1110 01111 1245688888888 7889999974 445 2110
Q ss_pred --ccee--ecCCCccccHHHHHHHHH----------------HHHHHHHcC-CCeecCCCCCCchHHHHHHHHHH
Q 020319 229 --HDGI--VREDGVIMNDETVHQLCK----------------QAVSQARAG-ADVVSPSDMMDGRVGAIRAALDA 282 (327)
Q Consensus 229 --HcGI--l~~~G~IdND~Tv~~Lak----------------~Als~A~AG-ADiVAPSDMMDGRV~aIR~aLD~ 282 (327)
..|+ +.+-=.-+|-+.+..|.+ ++....+.| +|+|.|.=+-=|=|...++..+.
T Consensus 229 L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~ 303 (394)
T 3mkc_A 229 IEDLELYFAEATLQHDDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEM 303 (394)
T ss_dssp TGGGCCSEEESCSCTTCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHH
T ss_pred hhhcCCeEEECCCCchhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHH
Confidence 0122 211111234444555544 344445554 89999988887877775555543
No 268
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=25.31 E-value=1.8e+02 Score=24.15 Aligned_cols=73 Identities=21% Similarity=0.255 Sum_probs=40.3
Q ss_pred HHHHHHHHHCCCeeEEeeeccc--------CCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCee----cCCCC
Q 020319 201 RTIWLLKDRYPDLVIYTDVALD--------PYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVV----SPSDM 268 (327)
Q Consensus 201 rAIr~iK~~fPdl~VitDVcLc--------~YTshGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiV----APSDM 268 (327)
+.|+.||+.+|++-|..|.-+. .+-..|=++++-. ....+++++.+.+.+-.+ |..++ .|.+
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~--~~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~t- 115 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVL--GVTDVLTIQSCIRAAKEA---GKQVVVDMICVDD- 115 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEE--TTSCHHHHHHHHHHHHHH---TCEEEEECTTCSS-
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEe--CCCChhHHHHHHHHHHHc---CCeEEEEecCCCC-
Confidence 6899999999998888876553 1223455665531 112245555555554433 44443 3432
Q ss_pred CCchHHHHHHHHHH
Q 020319 269 MDGRVGAIRAALDA 282 (327)
Q Consensus 269 MDGRV~aIR~aLD~ 282 (327)
-+..++++++.
T Consensus 116 ---~~~~~~~~~~~ 126 (211)
T 3f4w_A 116 ---LPARVRLLEEA 126 (211)
T ss_dssp ---HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHc
Confidence 24456666543
No 269
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=25.11 E-value=2.7e+02 Score=26.03 Aligned_cols=60 Identities=12% Similarity=0.143 Sum_probs=38.9
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCccccc------CcCC-C--CcHHHHHHHHHHHC-CCeeEEeeec
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE------AYND-N--GLVPRTIWLLKDRY-PDLVIYTDVA 220 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~------A~n~-~--glV~rAIr~iK~~f-Pdl~VitDVc 220 (327)
+.+ .+.++++++++.|.+.|-+-.. |..|.. .+.+ + ....+.|++|++++ |++-|+.|+.
T Consensus 149 ~~~-~~~~~a~~~~~~Gf~~vKik~~------~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan 218 (410)
T 2qq6_A 149 SNE-EYIAVAREAVERGFDAIKLDVD------DITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMH 218 (410)
T ss_dssp HHH-HHHHHHHHHHHTTCSEEEEECC------CSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CHH-HHHHHHHHHHHcCCCEEEeecc------ccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 443 5888999999999999987531 111110 0111 0 12457788899988 6898888874
No 270
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=25.11 E-value=77 Score=30.16 Aligned_cols=125 Identities=14% Similarity=0.176 Sum_probs=70.4
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCc-cc--ccCcC--------CC-CcHHHHHHHHHHHCC-CeeEEeeec
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSP-TG--DEAYN--------DN-GLVPRTIWLLKDRYP-DLVIYTDVA 220 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~-~G--s~A~n--------~~-glV~rAIr~iK~~fP-dl~VitDVc 220 (327)
.+. ++.+.+..+.++||++|-|=|+.+....|. .| ...|+ +. |-...-.+++++..- .|-||-|+-
T Consensus 41 ~~~-gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 41 SWQ-GIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp CHH-HHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CHH-HHHHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 454 688999999999999999988643222220 11 11222 11 333333333443332 799999998
Q ss_pred ccCCCCCC---------------------cceeec-CC---------C---------ccccHHHHHHHHHHHHHHHH-cC
Q 020319 221 LDPYSSDG---------------------HDGIVR-ED---------G---------VIMNDETVHQLCKQAVSQAR-AG 259 (327)
Q Consensus 221 Lc~YTshG---------------------HcGIl~-~~---------G---------~IdND~Tv~~Lak~Als~A~-AG 259 (327)
+-+-...+ .|.+.+ .+ | ...|.+..+.|.+...-..+ .|
T Consensus 120 ~NH~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~dln~~np~v~~~l~~~~~~w~~~~g 199 (484)
T 2aaa_A 120 PDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMVEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYS 199 (484)
T ss_dssp CSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHHHHHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcCCCCCCCcccccccccCCcccccCCCCCcccCCCCccccccccccCccccCccccCCHHHHHHHHHHHHHHHHhcC
Confidence 86433211 121110 00 0 12466777777777666666 69
Q ss_pred CCee---cCCCCCCchHHHHHHH
Q 020319 260 ADVV---SPSDMMDGRVGAIRAA 279 (327)
Q Consensus 260 ADiV---APSDMMDGRV~aIR~a 279 (327)
+|-+ +..-|-..-...|+++
T Consensus 200 vDGfR~D~~~~i~~~f~~~~~~~ 222 (484)
T 2aaa_A 200 VDGLRIDSVLEVQPDFFPGYNKA 222 (484)
T ss_dssp CCEEEESCSTTSCGGGHHHHHHH
T ss_pred CCEEEecccccCCHHHHHHHHhc
Confidence 9865 5555555566667665
No 271
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=24.95 E-value=1.2e+02 Score=26.37 Aligned_cols=46 Identities=17% Similarity=0.322 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeec
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVA 220 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVc 220 (327)
.+...++.+.+.|.+.|.+.-.+. -+.+++.|.+.||++.|+|+.-
T Consensus 139 T~~~a~~~L~~~G~~~I~~~~lv~-----------------~~~g~~~l~~~~p~~~I~t~~i 184 (209)
T 1i5e_A 139 SAVAAIDALKKRGAKSIKFMCLIA-----------------APEGVKAVETAHPDVDIYIAAL 184 (209)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSEE-----------------CHHHHHHHHHHCTTCEEEESEE
T ss_pred HHHHHHHHHHHcCCCEEEEEEEEE-----------------CHHHHHHHHHhCcCcEEEEEEe
Confidence 378888889999999888765432 1457889999999999999743
No 272
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=24.86 E-value=1.8e+02 Score=26.77 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+++.|+..+++.|. +|+...=..-=-.+.++...+.. ..+-||+=|
T Consensus 34 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv----------------- 88 (316)
T 3e96_A 34 HYKETVDRIVDNGIDVIVPCGN--------TSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI----------------- 88 (316)
T ss_dssp HHHHHHHHHHTTTCCEECTTSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE-----------------
T ss_pred HHHHHHHHHHHcCCCEEEeCcc--------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe-----------------
Confidence 5788888999999999998885 34433322222344555555543 346666522
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCeec---CCC---CCCchHHHHHHHHHHCCCCCceeeehh
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVVS---PSD---MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiVA---PSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYS 294 (327)
|. .-++|++ .+-..+++|||-|. |.- --||-+...++..+..+ ++||=|-
T Consensus 89 g~-~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~---lPiilYn 144 (316)
T 3e96_A 89 GY-ATSTAIE----LGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALD---FPSLVYF 144 (316)
T ss_dssp CS-SHHHHHH----HHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHT---SCEEEEE
T ss_pred Cc-CHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC---CCEEEEe
Confidence 11 2344554 44445678999765 532 23788889999888874 7999885
No 273
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=24.79 E-value=55 Score=32.40 Aligned_cols=76 Identities=16% Similarity=0.206 Sum_probs=46.5
Q ss_pred CCcccCCCCCCCCCcCCCChhhHhhhccCCCCCCCceeeEEEeeCCC-Ccc----cCCCCCceEecc-hhhHHHHHHHHH
Q 020319 94 TPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTP----IGAMPGCYRLGW-RHGLVQEVAKAR 167 (327)
Q Consensus 94 ~p~~~~~~~~~R~RRlR~~~~lR~l~~Et~Ls~~dLI~PlFV~eg~~-~~~----I~SMPGv~r~si-d~~l~~ev~~~~ 167 (327)
..++-++ +|=-|+.-|++|....++ .+-++||||.|... ... -.. -|..|+-. -+.|.+.-++|.
T Consensus 40 ~~~l~Wf---rrDLRl~DN~AL~~A~~~-----~~~v~~vfi~dp~~~~~~~~~~~~~-~~~~r~~Fl~~sL~~L~~~L~ 110 (525)
T 2j4d_A 40 GVTILWF---RNDLRVLDNDALYKAWSS-----SDTILPVYCLDPRLFHTTHFFNFPK-TGALRGGFLMECLVDLRKNLM 110 (525)
T ss_dssp CEEEEEE---SSCCCSTTCHHHHHHHHT-----CSEEEEEEEECGGGGSBCTTTCCBS-SCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEe---CCCcCcchhHHHHHHHhc-----CCcEEEEEEECchhhcccccccCCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 4456566 677889999999877654 23589999998542 110 000 23333211 123444444688
Q ss_pred HcCCCeEEEee
Q 020319 168 DVGVNSVVLFP 178 (327)
Q Consensus 168 ~lGI~sVlLFg 178 (327)
++|++-+++.|
T Consensus 111 ~~G~~L~v~~g 121 (525)
T 2j4d_A 111 KRGLNLLIRSG 121 (525)
T ss_dssp HTTCCCEEEES
T ss_pred HcCCeEEEEeC
Confidence 99999888876
No 274
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A
Probab=24.77 E-value=30 Score=32.97 Aligned_cols=40 Identities=35% Similarity=0.490 Sum_probs=28.7
Q ss_pred HHHHHHHHHcCCCeecCCCCCCch------------------------HHHHHHHHHHCCCCCceeee
Q 020319 249 CKQAVSQARAGADVVSPSDMMDGR------------------------VGAIRAALDAEGFQHVSIMS 292 (327)
Q Consensus 249 ak~Als~A~AGADiVAPSDMMDGR------------------------V~aIR~aLD~~Gf~~v~IMS 292 (327)
..||+.-|+|||.+|+| +=|| |..|.+..++.|| ++.||.
T Consensus 169 ~~Qa~aaa~AGa~~iSp---FVgRidd~~~~~~g~~~~~~~~d~gv~~v~~iy~~y~~~~~-~T~v~~ 232 (331)
T 2e1d_A 169 FAQAVACAEAGVTLISP---FVGRILDWHVANTDKKSYEPQGDPGVKSVTKIYNYYKKFGY-KTIVMG 232 (331)
T ss_dssp HHHHHHHHHHTCSEEEE---BSHHHHHHHHHHSSCCCCCGGGCHHHHHHHHHHHHHHHTTC-CCEEEE
T ss_pred HHHHHHHHHcCCcEEEe---cccHHHHHHHhhcCcccccccCCHHHHHHHHHHHHHHHcCC-CeEEec
Confidence 44899999999999999 2222 5566667777776 566664
No 275
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=24.71 E-value=41 Score=31.52 Aligned_cols=100 Identities=14% Similarity=0.149 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCee--EEeeecccCCCCCCcceeecC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLV--IYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~--VitDVcLc~YTshGHcGIl~~ 235 (327)
..+.|++++++.|-..|-+--.+. ..|+ |. |+.--.+.+-|+.+++..+++. ||- |
T Consensus 107 ~Kv~E~~~Av~~GAdEIDmVinig-~lks--g~--~~~~~~v~~eI~~v~~a~~~~~lKVIl-----------------E 164 (281)
T 2a4a_A 107 KVLNDTEKALDDGADEIDLVINYK-KIIE--NT--DEGLKEATKLTQSVKKLLTNKILKVII-----------------E 164 (281)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCHH-HHHH--SH--HHHHHHHHHHHHHHHTTCTTSEEEEEC-----------------C
T ss_pred HHHHHHHHHHHcCCCEEEEecchH-hhhC--CC--hhHHHHHHHHHHHHHHHhcCCceEEEE-----------------e
Confidence 468899999999999986632221 1221 11 1000156778888888754432 122 4
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCC-CCCc-----hHHHHHHHHHH
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSD-MMDG-----RVGAIRAALDA 282 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAPSD-MMDG-----RV~aIR~aLD~ 282 (327)
.+...+++-+...++.| .+||||+|=-|- ---| -|..+|+...+
T Consensus 165 t~~L~d~e~i~~A~~ia---~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~ 214 (281)
T 2a4a_A 165 VGELKTEDLIIKTTLAV---LNGNADFIKTSTGKVQINATPSSVEYIIKAIKE 214 (281)
T ss_dssp HHHHCSHHHHHHHHHHH---HTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHH
T ss_pred cccCCcHHHHHHHHHHH---HHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHH
Confidence 45555454466666665 489999998883 2235 67777777753
No 276
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=24.39 E-value=1.5e+02 Score=27.30 Aligned_cols=44 Identities=20% Similarity=0.026 Sum_probs=23.0
Q ss_pred HHHHHHHHHHcCCCeEEEe--ecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC
Q 020319 159 LVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY 210 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLF--gvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f 210 (327)
+...++.+...|-+.++|- |. ..-..|+.+.+=-++|..+|+.|
T Consensus 161 i~~Ave~i~~~Gn~~i~L~~Rg~--------~~yp~y~~~~vdl~~i~~lk~~~ 206 (276)
T 1vs1_A 161 LLAAAEYILLEGNWQVVLVERGI--------RTFEPSTRFTLDVAAVAVLKEAT 206 (276)
T ss_dssp HHHHHHHHHHTTCCCEEEEECCB--------CCSCCSSSSBCBHHHHHHHHHHB
T ss_pred HHHHHHHHHHcCCCeEEEEeCCc--------CCCCCcCcchhCHHHHHHHHHHh
Confidence 4444445555666555442 21 01122455556666777787765
No 277
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=24.30 E-value=1.3e+02 Score=28.79 Aligned_cols=94 Identities=16% Similarity=0.096 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcceeecCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGIl~~~G 237 (327)
++...++-+.+.|-+=+++-++ . .. .+ ..+.+=-++|..||+.||++.|. |.+|. .|
T Consensus 162 Ei~~Ave~i~~~G~~iiLlhc~-s-~Y------p~-~~~~~nL~ai~~lk~~f~~lpVg-------~sdHt-------~G 218 (349)
T 2wqp_A 162 SIKKSVEIIREAGVPYALLHCT-N-IY------PT-PYEDVRLGGMNDLSEAFPDAIIG-------LSDHT-------LD 218 (349)
T ss_dssp HHHHHHHHHHHHTCCEEEEECC-C-CS------SC-CGGGCCTHHHHHHHHHCTTSEEE-------EECCS-------SS
T ss_pred HHHHHHHHHHHcCCCEEEEecc-C-CC------CC-ChhhcCHHHHHHHHHHCCCCCEE-------eCCCC-------Cc
Confidence 4555556666777744444332 1 11 11 12334457899999999877653 55664 13
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeec----CCCCC---Cc-----------hHHHHHHHHHHCCC
Q 020319 238 VIMNDETVHQLCKQAVSQARAGADVVS----PSDMM---DG-----------RVGAIRAALDAEGF 285 (327)
Q Consensus 238 ~IdND~Tv~~Lak~Als~A~AGADiVA----PSDMM---DG-----------RV~aIR~aLD~~Gf 285 (327)
...++.-..+|||||= |.--| |+ .|..||+.-..-|-
T Consensus 219 -----------~~~~~AAvAlGA~iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~ 273 (349)
T 2wqp_A 219 -----------NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGG 273 (349)
T ss_dssp -----------SHHHHHHHHHTCCEEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred -----------HHHHHHHHHhCCCEEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCC
Confidence 2355555678999984 66666 44 38888888777775
No 278
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=24.27 E-value=49 Score=35.14 Aligned_cols=49 Identities=22% Similarity=0.262 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCeecCCCCCCchHH---HHHHHHHHCCCCCceeeeh
Q 020319 242 DETVHQLCKQAVSQARAGADVVSPSDMMDGRVG---AIRAALDAEGFQHVSIMSY 293 (327)
Q Consensus 242 D~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~---aIR~aLD~~Gf~~v~IMSY 293 (327)
|.|.+.+++.|+ +.+||+|+=|.+|.+-.. .+.++|.++|..+|.||.=
T Consensus 641 ~v~~eeiv~aA~---e~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivG 692 (762)
T 2xij_A 641 FQTPREVAQQAV---DADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCG 692 (762)
T ss_dssp TCCHHHHHHHHH---HTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred CCCHHHHHHHHH---HcCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 456777777665 569999999999987654 4667789999988888864
No 279
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=24.12 E-value=85 Score=28.28 Aligned_cols=51 Identities=24% Similarity=0.455 Sum_probs=39.5
Q ss_pred CCCCCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 145 GAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 145 ~SMPGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
..|||+. -..|+..+.++|...|.+||- . ..| | ...|+.||.-||++-++.
T Consensus 114 ~~~PG~~-------TptE~~~A~~~Gad~vK~FPa--~----~~g-------G--~~~lkal~~p~p~i~~~p 164 (217)
T 3lab_A 114 VFLPGVA-------TASEVMIAAQAGITQLKCFPA--S----AIG-------G--AKLLKAWSGPFPDIQFCP 164 (217)
T ss_dssp EEEEEEC-------SHHHHHHHHHTTCCEEEETTT--T----TTT-------H--HHHHHHHHTTCTTCEEEE
T ss_pred eEeCCCC-------CHHHHHHHHHcCCCEEEECcc--c----ccc-------C--HHHHHHHHhhhcCceEEE
Confidence 8889882 256888999999999999983 1 011 2 478999999999987765
No 280
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=23.95 E-value=65 Score=32.24 Aligned_cols=69 Identities=12% Similarity=0.119 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCccccc--CcCC------C--------------CcHHHHHHHHHHHCCCeeE
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE--AYND------N--------------GLVPRTIWLLKDRYPDLVI 215 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~--A~n~------~--------------glV~rAIr~iK~~fPdl~V 215 (327)
++.+.+..+.++||++|-|-|+.........|+. .|++ + --+.+.|+++.++ .|-|
T Consensus 121 g~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~--Gi~V 198 (637)
T 1gjw_A 121 KMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHIL--GIRV 198 (637)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHT--TCEE
T ss_pred HHHHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHC--CCEE
Confidence 5788889999999999999886321111111222 2221 1 1133344444443 7999
Q ss_pred EeeecccCCCCCC
Q 020319 216 YTDVALDPYSSDG 228 (327)
Q Consensus 216 itDVcLc~YTshG 228 (327)
|-||-+......+
T Consensus 199 ilD~V~nH~~~~~ 211 (637)
T 1gjw_A 199 ILDFIPRTAARDS 211 (637)
T ss_dssp EEEECTTEEETTC
T ss_pred EEEECcCCCcCcc
Confidence 9999876544433
No 281
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=23.95 E-value=2.7e+02 Score=23.52 Aligned_cols=48 Identities=8% Similarity=0.042 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
+.++.++.+.+.|+..+-+... + |. +.++... ..|+.|++.+ ++-|+.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~-d-------~~--~~~~~~~-~~i~~i~~~~-~ipv~v 79 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDL-D-------AA--FGRGSNH-ELLAEVVGKL-DVQVEL 79 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEH-H-------HH--TTSCCCH-HHHHHHHHHC-SSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEcC-c-------cc--ccCCChH-HHHHHHHHhc-CCcEEE
Confidence 3788899999999999887642 1 11 1233344 8899999886 455554
No 282
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=23.80 E-value=2.1e+02 Score=25.32 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=21.9
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCeecC-CCC-----CCchHHHHHHHHHH
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVVSP-SDM-----MDGRVGAIRAALDA 282 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiVAP-SDM-----MDGRV~aIR~aLD~ 282 (327)
|-|. .+|+..+ ++||||++.= |.. ....+..+|+++++
T Consensus 180 GGI~-~~ti~~~-------~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~~ 223 (227)
T 1tqx_A 180 GGLN-IETTEIS-------ASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQK 223 (227)
T ss_dssp SSCC-HHHHHHH-------HHHTCCEEEESHHHHTCSSHHHHHHHHHHHHHH
T ss_pred CCCC-HHHHHHH-------HHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHH
Confidence 5554 5566643 6789998632 222 23466666776653
No 283
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=23.73 E-value=42 Score=25.80 Aligned_cols=36 Identities=22% Similarity=0.433 Sum_probs=26.4
Q ss_pred CCchHHHHHHHHHHCCCCCceeeehh-hhhhccccch
Q 020319 269 MDGRVGAIRAALDAEGFQHVSIMSYT-AKYASSFYGP 304 (327)
Q Consensus 269 MDGRV~aIR~aLD~~Gf~~v~IMSYS-AKyASsfYGP 304 (327)
|.-|+..+|+.|.++|..-.-|.+-. -.|-|.|.|.
T Consensus 4 ~~~Rl~~lr~~m~~~~~da~li~~~~ni~YltGf~~~ 40 (131)
T 3il0_A 4 MQRRLERFDAKLVQSGLDALLVTGQNNIYYLTDFWGT 40 (131)
T ss_dssp GGGHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccccEEEeCcccC
Confidence 66799999999999999666555533 3566777663
No 284
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=23.66 E-value=1.1e+02 Score=26.96 Aligned_cols=45 Identities=9% Similarity=0.164 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDV 219 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDV 219 (327)
.+...++.+.+.|.++|.+.-.+.. +.+++.|.+.||++.|+|+.
T Consensus 136 T~~~ai~~L~~~G~~~I~~~~lv~~-----------------~~g~~~l~~~~p~v~I~t~~ 180 (208)
T 2e55_A 136 TLEVALREILKHSPLKVKSVHAIAA-----------------PEGLKRIEEKFKEVEIFVGN 180 (208)
T ss_dssp HHHHHHHHHHTTCBSEEEEEEEEEC-----------------HHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEEEEEC-----------------HHHHHHHHHHCCCcEEEEEe
Confidence 3788889999999999888654321 35899999999999999874
No 285
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=23.50 E-value=4.2e+02 Score=27.55 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=65.9
Q ss_pred cchhhHHH-HHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCc------------HHHHHHHHHHHCCCeeEEeeec
Q 020319 154 GWRHGLVQ-EVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVA 220 (327)
Q Consensus 154 sid~~l~~-ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~gl------------V~rAIr~iK~~fPdl~VitDVc 220 (327)
++. ++.+ .+..+.++||++|-|-|+.+.. ..++..|++-+. +.+.|++++++ .|-||-||-
T Consensus 199 t~~-~l~~~~L~yLk~LGvt~I~L~Pi~e~~---~~~~~GY~~~dy~a~~~~~Gt~~df~~lv~~~H~~--Gi~VilD~V 272 (755)
T 3aml_A 199 TYR-EFADNVLPRIRANNYNTVQLMAIMEHS---YYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSL--GLRVLMDVV 272 (755)
T ss_dssp CHH-HHHHHTHHHHHHTTCCEEEEESCEECS---CGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred CHH-HHHHHHHHHHHHcCCCEEEECchhcCC---CCCCCCCccCCCCccCCCCCCHHHHHHHHHHHHHC--CCEEEEEEe
Confidence 443 5666 4889999999999999863321 124445555443 44455555555 799999998
Q ss_pred ccCCCCCCccee-------------ecC--CC----------ccccHHHHHHHHHHHHHHHH-cCCCee
Q 020319 221 LDPYSSDGHDGI-------------VRE--DG----------VIMNDETVHQLCKQAVSQAR-AGADVV 263 (327)
Q Consensus 221 Lc~YTshGHcGI-------------l~~--~G----------~IdND~Tv~~Lak~Als~A~-AGADiV 263 (327)
+.........|+ ... +| ...|.+..+.|...+.-..+ -|+|-+
T Consensus 273 ~NH~~~~~~~g~~~fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e~gvDGf 341 (755)
T 3aml_A 273 HSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDGF 341 (755)
T ss_dssp CSCBCCCTTTSGGGGCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred ccccccccccchhccccCCCCCcceeecCCCCccCCCCCceeccCCHHHHHHHHHHHHHHHHHcCCCEE
Confidence 876543321221 000 01 12467888889999999888 798643
No 286
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=23.43 E-value=30 Score=32.20 Aligned_cols=44 Identities=16% Similarity=0.205 Sum_probs=31.3
Q ss_pred HHHcCC-CeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeE
Q 020319 166 ARDVGV-NSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVI 215 (327)
Q Consensus 166 ~~~lGI-~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~V 215 (327)
+..+|| +.|.|-+. .+.|++.....-.+..|+.++|+.+|++.+
T Consensus 199 ~~~~Gi~PrVAlLs~------~~~G~e~~~~~~~i~~A~~llk~~~~~~~v 243 (337)
T 1r5j_A 199 AKIFDIDPKIAMLSF------STKGSGKAPQVDKVREATEIATGLNPDLAL 243 (337)
T ss_dssp HHHTTCCCCEEEECS------CSTTSSCSHHHHHHHHHHHHHHHHCTTSCE
T ss_pred HHHcCCCCeEEEEec------CccCCCCCCCcHHHHHHHHHHhccCCCcEE
Confidence 444676 66777664 346776655555689999999999888765
No 287
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=23.41 E-value=1.6e+02 Score=25.77 Aligned_cols=62 Identities=19% Similarity=0.363 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCeec-CCCCCC---------------chHHHHHHHHHHCCCCCceeeehhhhhhccccc
Q 020319 242 DETVHQLCKQAVSQARAGADVVS-PSDMMD---------------GRVGAIRAALDAEGFQHVSIMSYTAKYASSFYG 303 (327)
Q Consensus 242 D~Tv~~Lak~Als~A~AGADiVA-PSDMMD---------------GRV~aIR~aLD~~Gf~~v~IMSYSAKyASsfYG 303 (327)
|+-.+.+.+.+-.+.++|||.|. +.--|. |.+.+.-+++...|..+|+||+=.+-..|.||-
T Consensus 59 ~~~~~~l~~~~~~L~~~g~~~iviaCNTa~~~~~~l~~~~~iPvi~i~~~~~~~a~~~~~~rVgvLaT~~T~~s~~y~ 136 (231)
T 3ojc_A 59 QTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGIDKIGLLGTRYTMEQGFYR 136 (231)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECSSGGGGGHHHHHHHHCSCBCCHHHHHHHHHHHTTCCEEEEESCHHHHHSTTTH
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEeCCchHHHHHHHHHhCCCCEeccHHHHHHHHHHcCCCEEEEEcCHHHhhchHHH
Confidence 56667888888888999999764 343343 445555555556788899999877777888884
No 288
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=22.88 E-value=55 Score=34.59 Aligned_cols=49 Identities=31% Similarity=0.338 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCeecCCCCCCchH---HHHHHHHHHCCCCCceeeeh
Q 020319 242 DETVHQLCKQAVSQARAGADVVSPSDMMDGRV---GAIRAALDAEGFQHVSIMSY 293 (327)
Q Consensus 242 D~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV---~aIR~aLD~~Gf~~v~IMSY 293 (327)
|.|.+.+++.|+ +.+||+|+=|.+|.+-. ..+.++|.++|..++.||.=
T Consensus 633 ~v~~eeiv~aA~---e~~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivG 684 (727)
T 1req_A 633 FQTPEETARQAV---EADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVG 684 (727)
T ss_dssp TBCHHHHHHHHH---HTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred CCCHHHHHHHHH---HcCCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEc
Confidence 456777777765 56999999999998765 45667789999988988864
No 289
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=22.63 E-value=2.7e+02 Score=23.96 Aligned_cols=99 Identities=21% Similarity=0.205 Sum_probs=54.5
Q ss_pred CCceEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCC
Q 020319 148 PGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSD 227 (327)
Q Consensus 148 PGv~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTsh 227 (327)
-|.+..+. +.++.++.+.+.|+..+.+-.. ..+ |. ..|.....++.|++.+ ++-|+.
T Consensus 23 ~g~~~~~~--~~~~~a~~~~~~Ga~~i~v~d~----~~~--~~----~~g~~~~~i~~i~~~~-~iPvi~---------- 79 (266)
T 2w6r_A 23 SGKKNTGI--LLRDWVVEVEKRGAGEILLTSI----DRD--GT----KSGYDTEMIRFVRPLT-TLPIIA---------- 79 (266)
T ss_dssp TTTEEEEE--EHHHHHHHHHHHTCSEEEEEET----TTS--SC----SSCCCHHHHHHHGGGC-CSCEEE----------
T ss_pred CCeeccCC--CHHHHHHHHHHCCCCEEEEEec----Ccc--cC----CCcccHHHHHHHHHhc-CCCEEE----------
Confidence 34445444 3788899999999999998432 122 21 2334567888888765 333333
Q ss_pred CcceeecCCCccccHHHHHHHHHHHHHHHHcCCCee-cCCCCCCc--hHHHHHHHHHHCC
Q 020319 228 GHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVV-SPSDMMDG--RVGAIRAALDAEG 284 (327)
Q Consensus 228 GHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiV-APSDMMDG--RV~aIR~aLD~~G 284 (327)
.|.|.+-+.++ .+ .++|||-| -.+..+++ ....+++.++..|
T Consensus 80 --------~ggi~~~~~i~----~~---~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g 124 (266)
T 2w6r_A 80 --------SGGAGKMEHFL----EA---FLAGADKALAASVFHFREIDMRELKEYLKKHG 124 (266)
T ss_dssp --------ESCCCSTHHHH----HH---HHHTCSEEECCCCC------CHHHHHHCC---
T ss_pred --------ECCCCCHHHHH----HH---HHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcC
Confidence 12233222222 22 24799964 45666656 6778888887776
No 290
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=22.35 E-value=67 Score=29.65 Aligned_cols=93 Identities=20% Similarity=0.222 Sum_probs=56.8
Q ss_pred CCCcHHHHHHHHHHHCCC--eeEEeeecccC----------C-CCCCcceeecCC-C-cc---ccHHHHHHHHHHHHHHH
Q 020319 195 DNGLVPRTIWLLKDRYPD--LVIYTDVALDP----------Y-SSDGHDGIVRED-G-VI---MNDETVHQLCKQAVSQA 256 (327)
Q Consensus 195 ~~glV~rAIr~iK~~fPd--l~VitDVcLc~----------Y-TshGHcGIl~~~-G-~I---dND~Tv~~Lak~Als~A 256 (327)
.....++++..|+...+. -+|++=+--|- + --.||-++-+ . | .+ =-+-+.+.+.+.|..+
T Consensus 102 s~~~~~~~~~~l~~~~~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~-~~G~eVi~LG~~vp~e~iv~aa~e~- 179 (262)
T 1xrs_B 102 EILSMEETDEYIKENIGRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLER-YEMIDAYNLGSQVANEDFIKKAVEL- 179 (262)
T ss_dssp CCCCHHHHHHHHHHHTCSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGG-CTTEEEEECCSSBCHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHh-cCCcEEEECCCCCCHHHHHHHHHHc-
Confidence 345678888888877643 23333111110 0 0123333333 3 4 22 2367888888877654
Q ss_pred HcCCCeecCCCCCCc---hHHHH---HHHHHHCCCC-Cceee
Q 020319 257 RAGADVVSPSDMMDG---RVGAI---RAALDAEGFQ-HVSIM 291 (327)
Q Consensus 257 ~AGADiVAPSDMMDG---RV~aI---R~aLD~~Gf~-~v~IM 291 (327)
.+|+|+-|-+|.. .+..+ .+.|.++|.. ++.||
T Consensus 180 --~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vi 219 (262)
T 1xrs_B 180 --EADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLL 219 (262)
T ss_dssp --TCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEE
T ss_pred --CCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEE
Confidence 8999999999998 66554 5567788984 58887
No 291
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=22.26 E-value=1.7e+02 Score=28.52 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=60.5
Q ss_pred HHHHHHHHHcCCCeEEEeecC-----------CCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCC
Q 020319 160 VQEVAKARDVGVNSVVLFPKV-----------PDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDG 228 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi-----------~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshG 228 (327)
.+-++.+.+.|...|-|.+-= .+.-.|+.|-.--|.--++.+.|++++++.++-.|. |-|.++...+
T Consensus 171 ~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~--~r~~~~~~~~ 248 (407)
T 3tjl_A 171 TNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIG--IRISPWATFQ 248 (407)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEE--EEECTTCCGG
T ss_pred HHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEE--EEECcccccC
Confidence 333455789999999996432 234467777655555567888899999998743344 4666655432
Q ss_pred cceeecCCCccccHHHHHHHHHHHHHHHHcC--CCeecCC
Q 020319 229 HDGIVREDGVIMNDETVHQLCKQAVSQARAG--ADVVSPS 266 (327)
Q Consensus 229 HcGIl~~~G~IdND~Tv~~Lak~Als~A~AG--ADiVAPS 266 (327)
|+..+...+...++-..|+++.-..+++| .|.|.=+
T Consensus 249 --g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~ 286 (407)
T 3tjl_A 249 --NMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVV 286 (407)
T ss_dssp --GCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred --CCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEE
Confidence 33221000112344445555554448889 8777533
No 292
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=21.95 E-value=4.7e+02 Score=24.12 Aligned_cols=78 Identities=21% Similarity=0.189 Sum_probs=45.4
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEe-ecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCccee
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLF-PKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGI 232 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLF-gvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHcGI 232 (327)
+++ +.++.++.+.+.|+..|-+. |-.....+-. ...+.-...++.||+.+ ++-||+
T Consensus 237 ~~~-~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~------~~~~~~~~~~~~ir~~~-~iPVi~--------------- 293 (349)
T 3hgj_A 237 SLE-DTLAFARRLKELGVDLLDCSSGGVVLRVRIP------LAPGFQVPFADAVRKRV-GLRTGA--------------- 293 (349)
T ss_dssp CHH-HHHHHHHHHHHTTCCEEEEECCCSCSSSCCC------CCTTTTHHHHHHHHHHH-CCEEEE---------------
T ss_pred CHH-HHHHHHHHHHHcCCCEEEEecCCcCcccccC------CCccccHHHHHHHHHHc-CceEEE---------------
Confidence 444 57888889999999988876 3221111100 11233345778888876 455554
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcC-CCeec
Q 020319 233 VREDGVIMNDETVHQLCKQAVSQARAG-ADVVS 264 (327)
Q Consensus 233 l~~~G~IdND~Tv~~Lak~Als~A~AG-ADiVA 264 (327)
.|.|.+-+. |...-++| ||.|+
T Consensus 294 ---~Ggi~t~e~-------a~~~l~~G~aD~V~ 316 (349)
T 3hgj_A 294 ---VGLITTPEQ-------AETLLQAGSADLVL 316 (349)
T ss_dssp ---CSSCCCHHH-------HHHHHHTTSCSEEE
T ss_pred ---ECCCCCHHH-------HHHHHHCCCceEEE
Confidence 355554333 33444677 99987
No 293
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=21.87 E-value=2e+02 Score=26.65 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDV 219 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDV 219 (327)
.+.++++++.+.|.+.|-+-. |. .-....+.|++|++++|++-|..|.
T Consensus 150 ~~~~~a~~~~~~Gf~~iKik~----------g~----~~~~~~e~v~avr~a~gd~~l~vD~ 197 (384)
T 2pgw_A 150 ELARDAAVGHAQGERVFYLKV----------GR----GEKLDLEITAAVRGEIGDARLRLDA 197 (384)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC----------CS----CHHHHHHHHHHHHTTSTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECc----------CC----CHHHHHHHHHHHHHHcCCcEEEEec
Confidence 578888999999999988721 11 1123456789999999888777775
No 294
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=21.81 E-value=3.2e+02 Score=27.42 Aligned_cols=109 Identities=21% Similarity=0.253 Sum_probs=67.6
Q ss_pred hHHHHHHHHHH-----cCCCeEEEeecCCCC---CCCcccccCcC----CCCcHHHHHHHHHHHCCCeeEEeeecccCCC
Q 020319 158 GLVQEVAKARD-----VGVNSVVLFPKVPDA---LKSPTGDEAYN----DNGLVPRTIWLLKDRYPDLVIYTDVALDPYS 225 (327)
Q Consensus 158 ~l~~ev~~~~~-----lGI~sVlLFgvi~~~---~KD~~Gs~A~n----~~glV~rAIr~iK~~fPdl~VitDVcLc~YT 225 (327)
.+++.++.+++ +|+.-|+| ++. .+|..|.--.| |+|+ ..-+..|+++==.+.|..|-- ++|
T Consensus 48 ~i~~~Ad~~~~~Gl~~~GyeyvvI----DDGW~~~rd~~G~~~~d~~kFP~Gl-k~Lad~ih~~GlKfGIw~~pG--~~t 120 (479)
T 3lrk_A 48 LLLDTADRISDLGLKDMGYKYIIL----DDCWSSGRDSDGFLVADEQKFPNGM-GHVADHLHNNSFLFGMYSSAG--EYT 120 (479)
T ss_dssp HHHHHHHHHHHTTCGGGTCCEEEC----CSSCEEEECTTSCEEECTTTCTTCH-HHHHHHHHHTTCEEEEEEESS--SBC
T ss_pred HHHHHHHHHHhcCccccCceEEEE----CCccccccCCCCCEecChhhcCCCH-HHHHHHHHHCCCeeEEEecCc--ccc
Confidence 36666777777 46665544 432 24556665545 3443 445677777755688888763 234
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeec------CCCC-----CCchHHHHHHHHHHCCC
Q 020319 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVS------PSDM-----MDGRVGAIRAALDAEGF 285 (327)
Q Consensus 226 shGHcGIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVA------PSDM-----MDGRV~aIR~aLD~~Gf 285 (327)
-.||-|.+ |..+.| |-.+|+-|.|.|= +++. +.-|..++++||.+.|-
T Consensus 121 C~~~pGsl---~~~~~d---------a~~fa~WGVDylK~D~c~~~~~~~~~~~~~~~y~~m~~AL~~tGR 179 (479)
T 3lrk_A 121 CAGYPGSL---GREEED---------AQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDALNKTGR 179 (479)
T ss_dssp TTSSBCCT---TCHHHH---------HHHHHHTTCCEEEEECTTCTTCCSSHHHHHHHHHHHHHHHHHHCS
T ss_pred ccCCCchh---HHHHHH---------HHHHHHhCCcEEEEccCCCccccCCcchhHHHHHHHHHHHHHhCC
Confidence 45666655 233322 5679999999874 2221 12479999999999985
No 295
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=21.81 E-value=95 Score=33.00 Aligned_cols=123 Identities=15% Similarity=0.103 Sum_probs=72.0
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCc----c--------------cccCcCCCCc-----HHHHHHHHHHHCCCeeE
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSP----T--------------GDEAYNDNGL-----VPRTIWLLKDRYPDLVI 215 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~----~--------------Gs~A~n~~gl-----V~rAIr~iK~~fPdl~V 215 (327)
+.+.+.-|.+|||++|-|-|+.+....|+ . ++.+.||.|- +.+.|++++++ .|-|
T Consensus 471 i~~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~--GI~V 548 (921)
T 2wan_A 471 VKTGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQ--RIGV 548 (921)
T ss_dssp CBCHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHT--TCEE
T ss_pred cchhhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCCCCCccHHHHHHHHHHHHHc--CCEE
Confidence 44567888899999999988633222221 1 1123344443 34444444444 7999
Q ss_pred EeeecccCCCCCCc---cee-----e--cCCCc------------cccHHHHHHHHHHHHHHHH-cCCCeec---CCCCC
Q 020319 216 YTDVALDPYSSDGH---DGI-----V--REDGV------------IMNDETVHQLCKQAVSQAR-AGADVVS---PSDMM 269 (327)
Q Consensus 216 itDVcLc~YTshGH---cGI-----l--~~~G~------------IdND~Tv~~Lak~Als~A~-AGADiVA---PSDMM 269 (327)
|-||-+-+....+| .++ . +.+|. -.|.+..+.|...+.-.++ -|.|-+= -.-+-
T Consensus 549 ILDvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~gVDGfR~Da~~~~~ 628 (921)
T 2wan_A 549 NMDVVYNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLDSVNYWVNEYHVDGFRFDLMALLG 628 (921)
T ss_dssp EEEECTTCCSCSSSSHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGGC
T ss_pred EEEEccccccccccccccCCCCCeEEEcCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHcCCCEEEeccccccC
Confidence 99998876655442 000 0 11221 1356777778887777785 7987441 12222
Q ss_pred CchHHHHHHHHHHC
Q 020319 270 DGRVGAIRAALDAE 283 (327)
Q Consensus 270 DGRV~aIR~aLD~~ 283 (327)
...+..+|++|++.
T Consensus 629 ~~~~~~~~~~l~~~ 642 (921)
T 2wan_A 629 KDTMAKISNELHAI 642 (921)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 24678899999875
No 296
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=21.41 E-value=2.2e+02 Score=27.86 Aligned_cols=88 Identities=15% Similarity=0.190 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCC-CCcccccCcCCCCcHHHH---HHHHHHHCCCeeEEeeecccCCCCCCcceeecC
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDAL-KSPTGDEAYNDNGLVPRT---IWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE 235 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~-KD~~Gs~A~n~~glV~rA---Ir~iK~~fPdl~VitDVcLc~YTshGHcGIl~~ 235 (327)
.+.++.+++.|++.|-+|--.++.. +-.. ..+.+..+.++ |+.+|+.- +-|..+.. |.|
T Consensus 113 ~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l---~~s~~e~l~~~~~~v~~ak~~G--~~V~~~~e-da~----------- 175 (423)
T 3ivs_A 113 MDDARVAVETGVDGVDVVIGTSQYLRKYSH---GKDMTYIIDSATEVINFVKSKG--IEVRFSSE-DSF----------- 175 (423)
T ss_dssp HHHHHHHHHTTCSEEEEEEEC----------------CHHHHHHHHHHHHHHTTT--CEEEEEEE-SGG-----------
T ss_pred hhhHHHHHHcCCCEEEEEeeccHHHHHHHc---CCCHHHHHHHHHHHHHHHHHCC--CEEEEEEc-cCc-----------
Confidence 4457888999999999985333321 1111 12344455554 44555543 33332211 211
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC
Q 020319 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD 270 (327)
Q Consensus 236 ~G~IdND~Tv~~Lak~Als~A~AGADiVAPSDMMD 270 (327)
- .+.+.+.+.+-...++|||.|.-.||.=
T Consensus 176 ---r---~d~~~~~~v~~~~~~~Ga~~i~l~DTvG 204 (423)
T 3ivs_A 176 ---R---SDLVDLLSLYKAVDKIGVNRVGIADTVG 204 (423)
T ss_dssp ---G---SCHHHHHHHHHHHHHHCCSEEEEEETTS
T ss_pred ---C---CCHHHHHHHHHHHHHhCCCccccCCccC
Confidence 1 2334456666667789999999998764
No 297
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=21.33 E-value=1e+02 Score=29.13 Aligned_cols=86 Identities=15% Similarity=0.253 Sum_probs=50.5
Q ss_pred CCCCCceeeEEEeeCCCCcccCCCCCceEec-chhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCc---------
Q 020319 124 LSPANFVYPLFIHEGEEDTPIGAMPGCYRLG-WRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAY--------- 193 (327)
Q Consensus 124 Ls~~dLI~PlFV~eg~~~~~I~SMPGv~r~s-id~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~--------- 193 (327)
|+.+..||=+|+-.-.. .| . ++ ++.+++..+.++|+++|-|=|+.+.. .+ ..+..|
T Consensus 6 ~~~~~viyq~f~w~~~~-------~G----~~~~-gi~~~Ldyl~~lGvt~I~l~Pi~~~~-~~-~~~~gY~~~dy~~lg 71 (435)
T 1mxg_A 6 LEEGGVIMQAFYWDVPG-------GG----IWWD-HIRSKIPEWYEAGISAIWLPPPSKGM-SG-GYSMGYDPYDYFDLG 71 (435)
T ss_dssp GGGTCCEEECCCTTCCC-------SS----CHHH-HHHHHHHHHHHHTCCEEECCCCSEET-TG-GGCCSSSEEETTCSS
T ss_pred ccCCcEEEEEEEeccCC-------CC----CHHH-HHHHHHHHHHHcCCCEEEeCCcccCC-CC-CCCCCcCcccccccc
Confidence 44566677777654211 12 2 43 68999999999999999998864321 11 001122
Q ss_pred --------CCC-CcH---HHHHHHHHHHCCCeeEEeeecccCCC
Q 020319 194 --------NDN-GLV---PRTIWLLKDRYPDLVIYTDVALDPYS 225 (327)
Q Consensus 194 --------n~~-glV---~rAIr~iK~~fPdl~VitDVcLc~YT 225 (327)
|+. |-. .+.|++++++ .|-||.|+-+-+-.
T Consensus 72 ~~~~~~~id~~~Gt~~df~~lv~~~H~~--Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 72 EYYQKGTVETRFGSKEELVRLIQTAHAY--GIKVIADVVINHRA 113 (435)
T ss_dssp CSCBTTBSSCSSCCHHHHHHHHHHHHHT--TCEEEEEECCSBCC
T ss_pred cccccCcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECccccc
Confidence 221 333 3444444444 79999999876543
No 298
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=21.30 E-value=2.9e+02 Score=24.99 Aligned_cols=99 Identities=27% Similarity=0.464 Sum_probs=64.8
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCC--eeEEeeecccCCCCCCcceeecCC
Q 020319 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 159 l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPd--l~VitDVcLc~YTshGHcGIl~~~ 236 (327)
|.-.++++.++||+.|+++-. .|..| .+++ +.+.+ |+++| | |.|.- +.
T Consensus 32 l~la~era~e~~Ik~iVVAS~--------sG~TA----------~k~~-e~~~~i~lVvVT------h----~~GF~-~p 81 (201)
T 1vp8_A 32 LRLAVERAKELGIKHLVVASS--------YGDTA----------MKAL-EMAEGLEVVVVT------Y----HTGFV-RE 81 (201)
T ss_dssp HHHHHHHHHHHTCCEEEEECS--------SSHHH----------HHHH-HHCTTCEEEEEE------C----CTTSS-ST
T ss_pred HHHHHHHHHHcCCCEEEEEeC--------CChHH----------HHHH-HHhcCCeEEEEe------C----cCCCC-CC
Confidence 444455799999999998753 23332 2222 24443 55554 3 56654 33
Q ss_pred Ccc-ccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeeehhhh
Q 020319 237 GVI-MNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAK 296 (327)
Q Consensus 237 G~I-dND~Tv~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYSAK 296 (327)
|.. ..+++.+.| -+.|..|+.=+-.+.|-=++|++.+ -|+..+-||+.+=+
T Consensus 82 g~~e~~~e~~~~L-------~~~G~~V~t~tH~lsgveR~is~kf--GG~~p~eiiA~tLR 133 (201)
T 1vp8_A 82 GENTMPPEVEEEL-------RKRGAKIVRQSHILSGLERSISRKL--GGVSRTEAIAEALR 133 (201)
T ss_dssp TCCSSCHHHHHHH-------HHTTCEEEECCCTTTTTHHHHHHHT--CCCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHH-------HhCCCEEEEEeccccchhHHHHHhc--CCCCHHHHHHHHHH
Confidence 433 346665544 4689999999999999888888854 67788888877643
No 299
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=21.16 E-value=1.7e+02 Score=29.89 Aligned_cols=23 Identities=22% Similarity=0.602 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKV 180 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi 180 (327)
++.+.+..|.++||++|-|-|+.
T Consensus 181 gi~~~L~yLk~LGvt~I~L~Pi~ 203 (714)
T 2ya0_A 181 AFIEKLDYLKDLGVTHIQLLPVL 203 (714)
T ss_dssp HHHTTHHHHHHHTCSEEEESCCB
T ss_pred HHHHHhHHHHHcCCCEEEECCcc
Confidence 68888999999999999999874
No 300
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=21.10 E-value=1.9e+02 Score=24.88 Aligned_cols=43 Identities=23% Similarity=0.520 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEe
Q 020319 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (327)
Q Consensus 160 ~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~Vit 217 (327)
.+|+.++.+.|...|.+||. ...| | ...++.++..+|++-|++
T Consensus 114 ~~e~~~A~~~Gad~v~~fpa------~~~g-------G--~~~lk~l~~~~~~ipvva 156 (207)
T 2yw3_A 114 PTEVERALALGLSALKFFPA------EPFQ-------G--VRVLRAYAEVFPEVRFLP 156 (207)
T ss_dssp HHHHHHHHHTTCCEEEETTT------TTTT-------H--HHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHCCCCEEEEecC------cccc-------C--HHHHHHHHhhCCCCcEEE
Confidence 67788899999999999981 1121 1 356899999999876654
No 301
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=20.97 E-value=3e+02 Score=25.57 Aligned_cols=48 Identities=21% Similarity=0.164 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHC-CCeeEEeee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDV 219 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~f-Pdl~VitDV 219 (327)
++.+.++++.+.|.+.|-|-. |. -+. .. .+.|+++++++ |++-|+.|+
T Consensus 167 ~~~~~a~~~~~~Gf~~vKik~----------g~--~~~-~~-~e~v~avr~a~g~d~~l~vDa 215 (388)
T 2nql_A 167 ARGELAKYWQDRGFNAFKFAT----------PV--ADD-GP-AAEIANLRQVLGPQAKIAADM 215 (388)
T ss_dssp HHHHHHHHHHHTTCCEEEEEG----------GG--CTT-CH-HHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEeC----------CC--CCh-HH-HHHHHHHHHHhCCCCEEEEEC
Confidence 588889999999999988731 21 122 34 67899999988 689888886
No 302
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=20.97 E-value=2e+02 Score=24.38 Aligned_cols=108 Identities=18% Similarity=0.231 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCe-eEEeeecccCCCCCCcceeecCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDL-VIYTDVALDPYSSDGHDGIVRED 236 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl-~VitDVcLc~YTshGHcGIl~~~ 236 (327)
.+.+.++.+.++|+..|-||..-|...+.. .+++ --.+.++.+.++. +| .+. +..+|... +.. +
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~-gl~~~~---~h~~~~~~----l~s-~ 79 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRSWRPR----ALSP--AEVEAFRALREAS-GGLPAV---IHASYLVN----LGA-E 79 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTCCSCC----CCCH--HHHHHHHHHHHHT-TCCCEE---EECCTTCC----TTC-S
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcCcCC----CCCH--HHHHHHHHHHHHc-CCceEE---EecCcccC----CCC-C
Confidence 377888999999999999987522211110 0111 1223333333333 23 221 22244211 111 1
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCeec--CCCCCCc---hHHHHHHHHHHC
Q 020319 237 GVIMNDETVHQLCKQAVSQARAGADVVS--PSDMMDG---RVGAIRAALDAE 283 (327)
Q Consensus 237 G~IdND~Tv~~Lak~Als~A~AGADiVA--PSDMMDG---RV~aIR~aLD~~ 283 (327)
.. .-+++++.+.+..-.-++-||..|- |... | -+..+++.++.+
T Consensus 80 ~~-~r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~--~~~~~~~~l~~l~~~a 128 (270)
T 3aam_A 80 GE-LWEKSVASLADDLEKAALLGVEYVVVHPGSG--RPERVKEGALKALRLA 128 (270)
T ss_dssp ST-HHHHHHHHHHHHHHHHHHHTCCEEEECCCBS--CHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHcCCCEEEECCCCC--CHHHHHHHHHHHHHhh
Confidence 11 1245777777766666778998762 3222 3 355667777665
No 303
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=20.94 E-value=1.5e+02 Score=29.21 Aligned_cols=122 Identities=16% Similarity=0.185 Sum_probs=75.1
Q ss_pred cchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCC---------Cc---HHHHHHHHHHHCCCeeEEeeecc
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GL---VPRTIWLLKDRYPDLVIYTDVAL 221 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~---------gl---V~rAIr~iK~~fPdl~VitDVcL 221 (327)
.+. ++.+.+.-+.++||++|-|=|+.+.. . ...|++- |- ..+.|++++++ .|-||-|+-+
T Consensus 174 ~~~-gi~~~LdyLk~LGvt~I~L~Pi~~~~--~---~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~--Gi~VilD~V~ 245 (588)
T 1j0h_A 174 DLQ-GIIDHLDYLVDLGITGIYLTPIFRSP--S---NHKYDTADYFEVDPHFGDKETLKTLIDRCHEK--GIRVMLDAVF 245 (588)
T ss_dssp CHH-HHHHTHHHHHHHTCCEEEECCCEECS--S---SSCCSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred CHH-HHHHHHHHHHHcCCCEEEECCcccCC--C---CCCcCccccCccCccCCCHHHHHHHHHHHHHC--CCEEEEEECc
Confidence 353 68889999999999999998863321 1 1223322 22 34445555554 7999999987
Q ss_pred cCCCCCCcc-------e---------eecC-----------------CC----ccccHHHHHHHHHHHHHHH-HcCCCee
Q 020319 222 DPYSSDGHD-------G---------IVRE-----------------DG----VIMNDETVHQLCKQAVSQA-RAGADVV 263 (327)
Q Consensus 222 c~YTshGHc-------G---------Il~~-----------------~G----~IdND~Tv~~Lak~Als~A-~AGADiV 263 (327)
-......+- | ..++ .+ ...|.+..+.|.+.+.-.. +-|+|-+
T Consensus 246 NH~~~~~~~f~~~~~~g~~s~y~dwy~~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~giDGf 325 (588)
T 1j0h_A 246 NHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGW 325 (588)
T ss_dssp SBCCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred CcCcccchhHHHHHhcCCCCCcccccccccCCCCCCCCCCeEEecCCCCccccccCCHHHHHHHHHHHHHHHHhcCCcEE
Confidence 654432210 0 1110 00 2357788888888888888 6798754
Q ss_pred ---cCCCCCCchHHHHHHHHHHC
Q 020319 264 ---SPSDMMDGRVGAIRAALDAE 283 (327)
Q Consensus 264 ---APSDMMDGRV~aIR~aLD~~ 283 (327)
+.+.+-..-+..||+++++.
T Consensus 326 R~D~a~~~~~~f~~~~~~~v~~~ 348 (588)
T 1j0h_A 326 RLDVANEIDHEFWREFRQEVKAL 348 (588)
T ss_dssp EETTGGGSCHHHHHHHHHHHHHH
T ss_pred EEeccccCCHHHHHHHHHHHHHh
Confidence 22223335678889988875
No 304
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=20.89 E-value=80 Score=29.44 Aligned_cols=82 Identities=17% Similarity=0.223 Sum_probs=50.4
Q ss_pred eEecchhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcHHHHHHHHHHHCCCeeEEeeecccCCCCCCcc
Q 020319 151 YRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHD 230 (327)
Q Consensus 151 ~r~sid~~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV~rAIr~iK~~fPdl~VitDVcLc~YTshGHc 230 (327)
.|+..+ .+++.++.+.++|+..|.| +|..|.. .| .-+.+-|+.+|+++|++ +..-|+|+
T Consensus 164 ~~~~~~-~~~~~~~~~~~~Ga~~i~l--------~DT~G~~--~P-~~v~~lv~~l~~~~p~~---------~i~~H~Hn 222 (337)
T 3ble_A 164 FRNSPD-YVKSLVEHLSKEHIERIFL--------PDTLGVL--SP-EETFQGVDSLIQKYPDI---------HFEFHGHN 222 (337)
T ss_dssp HHHCHH-HHHHHHHHHHTSCCSEEEE--------ECTTCCC--CH-HHHHHHHHHHHHHCTTS---------CEEEECBC
T ss_pred CcCCHH-HHHHHHHHHHHcCCCEEEE--------ecCCCCc--CH-HHHHHHHHHHHHhcCCC---------eEEEEecC
Confidence 344554 5788888899999887655 2333332 22 23567889999999853 34557775
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 020319 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (327)
Q Consensus 231 GIl~~~G~IdND~Tv~~Lak~Als~A~AGADiVAPS 266 (327)
- -|. =..-++.-.+||||+|==|
T Consensus 223 d----~Gl---------A~AN~laAv~aGa~~vd~t 245 (337)
T 3ble_A 223 D----YDL---------SVANSLQAIRAGVKGLHAS 245 (337)
T ss_dssp T----TSC---------HHHHHHHHHHTTCSEEEEB
T ss_pred C----cch---------HHHHHHHHHHhCCCEEEEe
Confidence 2 221 1123455678899987433
No 305
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=20.83 E-value=5.4e+02 Score=24.37 Aligned_cols=136 Identities=17% Similarity=0.198 Sum_probs=71.2
Q ss_pred cchhhHHHHHHHHHHcCCCeEEE-eecCCCCCCCccccc----CcCC------C----------CcHHHHHHHHHHHC-C
Q 020319 154 GWRHGLVQEVAKARDVGVNSVVL-FPKVPDALKSPTGDE----AYND------N----------GLVPRTIWLLKDRY-P 211 (327)
Q Consensus 154 sid~~l~~ev~~~~~lGI~sVlL-Fgvi~~~~KD~~Gs~----A~n~------~----------glV~rAIr~iK~~f-P 211 (327)
+.+ ++.++++++++.|.+++.| +|. +. .....|.. .+++ . .-..+-|+++++.+ |
T Consensus 143 ~~e-~~~~~a~~~~~~Gf~~~K~k~G~-~~-~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~ 219 (418)
T 3r4e_A 143 DIA-ETVEAVGHYIDMGYKAIRAQTGV-PG-IKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGF 219 (418)
T ss_dssp SHH-HHHHHHHHHHHTTCSEEEEEECC-TT-C------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCS
T ss_pred CHH-HHHHHHHHHHHcCCCEEEEecCC-cc-ccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCC
Confidence 443 6889999999999999998 342 21 11111110 0111 0 01345688899998 6
Q ss_pred CeeEEeeecccCCCCCC---------ccee--ecCCCccccHHHHHHHHH----------------HHHHHHHcC-CCee
Q 020319 212 DLVIYTDVALDPYSSDG---------HDGI--VREDGVIMNDETVHQLCK----------------QAVSQARAG-ADVV 263 (327)
Q Consensus 212 dl~VitDVcLc~YTshG---------HcGI--l~~~G~IdND~Tv~~Lak----------------~Als~A~AG-ADiV 263 (327)
++-|+.|.. +.||..- ..|+ +.+-=.-+|-+.+..|.+ ++....+.| +|+|
T Consensus 220 d~~l~vDaN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v 298 (418)
T 3r4e_A 220 DHHLLHDGH-HRYTPQEAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQNQLIDYI 298 (418)
T ss_dssp SSEEEEECT-TCSCHHHHHHHHHHHGGGCCSEEESCSCCSSGGGGHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEE
T ss_pred CCeEEEeCC-CCCCHHHHHHHHHHHHhhCCCEEECCCCccCHHHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHcCCCCeE
Confidence 899999975 3443210 0011 111001123444444444 333444555 8999
Q ss_pred cCCCCCCchHHHHHHHHHHCCCCCceeeeh
Q 020319 264 SPSDMMDGRVGAIRAALDAEGFQHVSIMSY 293 (327)
Q Consensus 264 APSDMMDGRV~aIR~aLD~~Gf~~v~IMSY 293 (327)
.|.=|-=|=|...++..+.+--.++.+|.+
T Consensus 299 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~h 328 (418)
T 3r4e_A 299 RATVVGAGGLTHLRRIADLASLYQVRTGCH 328 (418)
T ss_dssp CCCTTTTTHHHHHHHHHHHHHHTTCEEEEC
T ss_pred ecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 998887777776555554332223344433
No 306
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=20.52 E-value=1.1e+02 Score=29.25 Aligned_cols=121 Identities=16% Similarity=0.152 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCccccc-----CcCCC-Cc---HHHHHHHHHHHCCCeeEEeeecccCCCCCC
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE-----AYNDN-GL---VPRTIWLLKDRYPDLVIYTDVALDPYSSDG 228 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~-----A~n~~-gl---V~rAIr~iK~~fPdl~VitDVcLc~YTshG 228 (327)
++.+.+..+.++||++|-|=|+.+.. . ..|-. +.||. |- +.+.|++++++ .|-||-|+-+-+-.. .
T Consensus 57 gi~~~LdyL~~LGv~~I~L~Pi~~~~-~-~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~--Gi~VilD~V~NH~s~-~ 131 (488)
T 2wc7_A 57 GIMEDLDYIQNLGINAIYFTPIFQSA-S-NHRYHTHDYYQVDPMLGGNEAFKELLDAAHQR--NIKVVLDGVFNHSSR-G 131 (488)
T ss_dssp HHHHTHHHHHHHTCCEEEESCCEEEC-T-TCTTSEEEEEEECGGGTHHHHHHHHHHHHHHT--TCEEEEEECCSBCCS-S
T ss_pred HHHHhhHHHHHcCCCEEEECCCCCCC-C-CCCCCCcCccccCcccCCHHHHHHHHHHHHHC--CCEEEEEeCCCcCCC-c
Confidence 68889999999999999998864321 1 12211 11111 22 34444455554 799999998754322 2
Q ss_pred cce-----------------eecC------CC------------------ccccHHHHHHHHHHHHHHHHcCCCee---c
Q 020319 229 HDG-----------------IVRE------DG------------------VIMNDETVHQLCKQAVSQARAGADVV---S 264 (327)
Q Consensus 229 HcG-----------------Il~~------~G------------------~IdND~Tv~~Lak~Als~A~AGADiV---A 264 (327)
|-- +..+ +| .-.|.+..+.+.+.+.-..+.|+|-+ +
T Consensus 132 ~~~f~~~~~~~~~s~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl~~gvDGfR~D~ 211 (488)
T 2wc7_A 132 FFFFHDVLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWLKFGIDGWRLDV 211 (488)
T ss_dssp SHHHHHHHHHGGGCTTGGGBCBCSSSCCSSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHHTCCEEEESS
T ss_pred CHHHHHHHhcCCCCCCCCceeecCCCCCCCCCCCCCCccccCCCCCcCeeccCCHHHHHHHHHHHHHHHHCCCCEEEEec
Confidence 210 0000 00 12477888888888887789999854 3
Q ss_pred CCCCCCc-hHHHHHHHHHHC
Q 020319 265 PSDMMDG-RVGAIRAALDAE 283 (327)
Q Consensus 265 PSDMMDG-RV~aIR~aLD~~ 283 (327)
...|-.. -...+|+.+++.
T Consensus 212 ~~~i~~~~~~~~~~~~~~~~ 231 (488)
T 2wc7_A 212 PFEIKTPGFWQEFRDRTKAI 231 (488)
T ss_dssp GGGCCCTTHHHHHHHHHHHH
T ss_pred ccccChHHHHHHHHHHHHhh
Confidence 3333333 788999999875
No 307
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=20.27 E-value=6.6e+02 Score=25.11 Aligned_cols=94 Identities=20% Similarity=0.181 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccccCcCCCCcH--HHHHHHHHHHCCCeeEEee---ecccCCCCCCccee
Q 020319 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLV--PRTIWLLKDRYPDLVIYTD---VALDPYSSDGHDGI 232 (327)
Q Consensus 158 ~l~~ev~~~~~lGI~sVlLFgvi~~~~KD~~Gs~A~n~~glV--~rAIr~iK~~fPdl~VitD---VcLc~YTshGHcGI 232 (327)
.+++.++++.+.|+..|-|= .||... .-.. .+.++.+-+++.-.+||-| +++ ..|-+|+
T Consensus 26 ~l~~~ve~al~~Gv~~vQlR------~K~~~~------~~~~~~a~~l~~l~~~~~v~liIND~~dlA~----~~gAdGV 89 (540)
T 3nl6_A 26 TLYGQVEAGLQNGVTLVQIR------EKDADT------KFFIEEALQIKELCHAHNVPLIINDRIDVAM----AIGADGI 89 (540)
T ss_dssp CHHHHHHHHHHTTCSEEEEC------CSSSCT------THHHHHHHHHHHHHHHTTCCEEECSCSHHHH----HTTCSEE
T ss_pred hHHHHHHHHHHCCCCEEEEe------cCCCCH------HHHHHHHHHHHHHHHhcCCEEEEeCcHHHHH----HcCCCEE
Confidence 48899999999999988772 243311 1122 2333444456655566644 333 2455565
Q ss_pred ecCCCccccHHHHHHH-------------HHHHHHHHHcC---CCeecCCCC
Q 020319 233 VREDGVIMNDETVHQL-------------CKQAVSQARAG---ADVVSPSDM 268 (327)
Q Consensus 233 l~~~G~IdND~Tv~~L-------------ak~Als~A~AG---ADiVAPSDM 268 (327)
=-...... -..+..+ .+++....+.| ||.|.-+-+
T Consensus 90 HLgq~dl~-~~~ar~~lg~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpv 140 (540)
T 3nl6_A 90 HVGQDDMP-IPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTL 140 (540)
T ss_dssp EECTTSSC-HHHHHHHHCTTSEEEEEECSHHHHHHHHHTCC--CCEEEESCC
T ss_pred EEChhhcC-HHHHHHHhCCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCC
Confidence 32111111 1112211 23566667789 999985443
No 308
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=20.24 E-value=75 Score=24.50 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=22.2
Q ss_pred chHHHHHHHHHHCCCCCceeeeh-hhhhhccccc
Q 020319 271 GRVGAIRAALDAEGFQHVSIMSY-TAKYASSFYG 303 (327)
Q Consensus 271 GRV~aIR~aLD~~Gf~~v~IMSY-SAKyASsfYG 303 (327)
-|+..+|+.|.++|..-.-|.+- .-.|-|.|.|
T Consensus 5 ~Rl~~lr~~m~~~~~da~li~~~~ni~yltGf~g 38 (138)
T 3pn9_A 5 SKLQQILTYLESEKLDVAVVSDPVTINYLTGFYS 38 (138)
T ss_dssp CHHHHHHHHHHHHTCSEEEECCHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHCCCCEEEEcCcCceeeecCCCC
Confidence 38889999999988855555442 2345566665
Done!