BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020320
(327 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 173/363 (47%), Gaps = 73/363 (20%)
Query: 4 AWYYEEYGPKEVLKLG-DFPLPTPQH-DQLLVQVRAAALNPIDSKRR-----------QR 50
AW ++YG EVL+ + +P + ++++V+V AA++NPID R +
Sbjct: 24 AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83
Query: 51 PLF----PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAE 106
PL +FP G D++G+V+ G V F GDEV+ + + KQ G L+E
Sbjct: 84 PLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPW------KQ-GTLSE 136
Query: 107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFK----TGQTIFIVGGAGGV 161
F+VV + ++ KPK+++ +AASLP TA K G TG+ + I+G +GGV
Sbjct: 137 FVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGV 196
Query: 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK---FDVLYD 218
GT IQ+ K + +HV A S E V++LGAD VIDY+ E+ + FD + D
Sbjct: 197 GTFAIQVMKAW--DAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILD 254
Query: 219 TIGDCKNS--------------------FVVAKDNAPIVD------IT---------WPP 243
+G + F++ D I D +T W
Sbjct: 255 NVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKG 314
Query: 244 SHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKV 303
H R ++ SG L+ + +++GK++ I+ T P F V EAF +E G ARGK
Sbjct: 315 VHYR--WAFFMASGPCLDDIAELVDAGKIRPVIEQTFP--FSKVPEAFLKVERGHARGKT 370
Query: 304 VIS 306
VI+
Sbjct: 371 VIN 373
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 149/319 (46%), Gaps = 28/319 (8%)
Query: 4 AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-----PSDFP 58
A ++++GP +VLKL D P P + +Q L++V AA+LNPID K R F ++ P
Sbjct: 9 AIQFDQFGPPKVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLP 68
Query: 59 AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKK 118
+ G D +G V+ G+ V N GD+V G G AE++ I +K
Sbjct: 69 SGLGYDFSGEVIELGSDVNNVNIGDKVXG------IAGFPDHPCCYAEYVCASPDTIIQK 122
Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
+ +SF +AASLP A TA++ A K G + I GAGGVG L IQLAK + V
Sbjct: 123 LEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ--KGTTV 180
Query: 179 VATTSTPKVEFVKELGADKVIDYRKTKY-EDIEEKFDVLYDTIGD--CKNSFVVAKDNAP 235
+ T S F+K LGA++ I+Y + + I D + D +G S K+
Sbjct: 181 ITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKETGC 240
Query: 236 IVDI----------TWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFK 285
IV + H RA + E L L + KL+ +I ++
Sbjct: 241 IVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEISRI--FQLS 298
Query: 286 DVIEAFRYLETGRARGKVV 304
+ + A LETG RGK+V
Sbjct: 299 EAVTAHELLETGHVRGKLV 317
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 156/325 (48%), Gaps = 45/325 (13%)
Query: 20 DFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTK 78
+ P P P +LV+V+A ++NP+D K RR P +D+ + G D AGIV A G VT
Sbjct: 44 ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVI-GYDAAGIVSAVGPDVTL 102
Query: 79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
F GDEV+ G + + G AEF +V+E ++ +KPK + + EAA+LPL TA
Sbjct: 103 FRPGDEVF-------YAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAW 155
Query: 139 EGF------KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVK 191
E F I IVGGAGGVG++ +Q+A+ + V+AT S P+ E+VK
Sbjct: 156 EAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLT-VIATASRPETQEWVK 214
Query: 192 ELGADKVIDYRKTKYEDIEE----KFDVLYDTIGDCKNSFVVAK-----------DNAPI 236
LGA VID+ K ++ ++ T K++ +A D+
Sbjct: 215 SLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPSA 274
Query: 237 VDITWPPSHPRAIYSSLTVS------------GEILEKLRPFIESGKLKAQI-DPTGPYK 283
DI +I+ L + G +L + ++ G+L+ + + P
Sbjct: 275 FDIXLFKRKAVSIHHELXFTRPXFGTPDXSEQGRLLNDVSRLVDEGRLRTTLTNRLSPIN 334
Query: 284 FKDVIEAFRYLETGRARGKVVISAF 308
++ +A +E+G ARGKVVI F
Sbjct: 335 AANLKQAHALVESGTARGKVVIEGF 359
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 15 VLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGT 74
+ K + +P P+ ++LV++++ ++NP+D+K QR + S P V G D G+V + G
Sbjct: 19 LFKTFNLDIPEPKVHEILVKIQSISVNPVDTK--QRLMDVSKAPRVLGFDAIGVVESVGN 76
Query: 75 SVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAV 134
VT FN GD VY G Q G+ AE+ ++ E L+AK PKNIS E+A SLPL
Sbjct: 77 EVTMFNQGDIVY-------YSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTG 129
Query: 135 QTAIEGF-------KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187
TA E + G+T+ I+ GAGGVG++ Q+AK YG + + +
Sbjct: 130 ITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKA-YGLRVITTASRNETI 188
Query: 188 EFVKELGADKVIDYRKT 204
E+ K++GAD V++++++
Sbjct: 189 EWTKKMGADIVLNHKES 205
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 158/331 (47%), Gaps = 43/331 (12%)
Query: 8 EEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRR--QRPLFPSDFPAVPGCDM 65
E GP + KL P P Q+LVQ+ A+ NP+D+K R + P PA+ G D+
Sbjct: 15 EANGPFVLRKLAR---PQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGXDL 71
Query: 66 AGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFE 125
AG VVA G V F GD V+G G L+ G A+F V+ L+A KP ++
Sbjct: 72 AGTVVAVGPEVDSFRVGDAVFGLT---GGVGGLQ--GTHAQFAAVDARLLASKPAALTXR 126
Query: 126 EAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184
+A+ LPL TA EG A + GQT+ I GG GGVG + IQ+A + V AT
Sbjct: 127 QASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIA--LARGARVFATARG 184
Query: 185 PKVEFVKELGADKVIDYRKTKYEDIE----EKFDVLYDTIGD--CKNSFVVAKDNAPIVD 238
+E+V++LGA + R+ + E + FD++YDT+G SF K +V
Sbjct: 185 SDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVS 244
Query: 239 -ITW------PPSHPRAIYS------------SLTVSGEILEKLRPFIESGKLKAQIDPT 279
+ W P S +A YS L GE L + +++GKL ++DP
Sbjct: 245 CLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEXLREADALVQTGKLAPRLDPR 304
Query: 280 GPYKFKDVIEAFRYL----ETGRARGKVVIS 306
+ ++ A+ + + R RGK+ I+
Sbjct: 305 -TFSIAEIGSAYDAVLGRNDVPRQRGKIAIT 334
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 152/338 (44%), Gaps = 50/338 (14%)
Query: 11 GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPAVPGCDMAG 67
G EVL++ D P+P P ++ V+++AAALN +D R+ P P P V G D +G
Sbjct: 10 GGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLP--LPHVLGADGSG 67
Query: 68 IVVAKGTSVTKFNTGDEVYGNI--------QDFNAEGKL---------KQLGALAEFIVV 110
+V A G V F GDEV N + E L + G AE++V+
Sbjct: 68 VVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVL 127
Query: 111 EESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLA 169
E+ +A KPKN+SFEEAA++PL TA + G + G + ++ GV IQ+A
Sbjct: 128 PEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIA 187
Query: 170 KHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDC 223
K +GA + S K+ K LGAD+ ++Y + + D + D G
Sbjct: 188 K-LFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGAL 246
Query: 224 KNSFVV-AKDNAPIVDI---------TWPPSHPRAIYSSLTVSGEIL---EKLRP---FI 267
V+ A N + I T P +H Y L++ G + +L P F+
Sbjct: 247 YFEGVIKATANGGRIAIAGASSGYEGTLPFAH--VFYRQLSILGSTMASKSRLFPILRFV 304
Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
E GKLK + P + E R LE R GKVV+
Sbjct: 305 EEGKLKPVVGQVLP--LEAAAEGHRLLEERRVFGKVVL 340
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 147/331 (44%), Gaps = 45/331 (13%)
Query: 8 EEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMA 66
+ +G +V +G PLP ++LV+ A +N D +RQ P D + G +++
Sbjct: 35 KSFGGPDVXVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELS 94
Query: 67 GIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE 126
G +V G V+ + GD+V G L GA AE+ ++ I PK +
Sbjct: 95 GEIVGVGPGVSGYAVGDKVCG----------LANGGAYAEYCLLPAGQILPFPKGYDAVK 144
Query: 127 AASLPLAVQTAIEG-FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185
AA+LP T F+ AG G+++ I GG G+GT IQLA+ F GA ST
Sbjct: 145 AAALPETFFTVWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTG 203
Query: 186 KVEFVKELGADKVIDYRKTKYEDI-----EEKFDVLYDTIGDC---KNSFVVAKDN---- 233
K E + LGA + I+YR + + + D++ D IG +N +AKD
Sbjct: 204 KCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSI 263
Query: 234 --------------API----VDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQ 275
+PI + +T PR + ++L ++ P +E+G +
Sbjct: 264 IAFLGGAVAEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPV 323
Query: 276 IDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
I + F+DV +A R LE G GKV ++
Sbjct: 324 IHKV--FAFEDVADAHRLLEEGSHVGKVXLT 352
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 14 EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
EV P P DQ+ V+V A A+NP D+K R + P F G D AG VVA G
Sbjct: 22 EVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTKMRGQFATPWAFL---GTDYAGTVVAVG 78
Query: 74 TSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLA 133
+ VT GD VYG + + GA +++ V + AK PK +SFE+AA+LP
Sbjct: 79 SDVTHIQVGDRVYGAQNEMCP--RTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAG 136
Query: 134 VQTAIEGFKTAGFKTGQT-------------IFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
+ TA K G + + GG+ T+ +Q+ + +A
Sbjct: 137 ISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIA 194
Query: 181 TTSTPKVEFVKELGADKVIDYR 202
T S + K GA++V DYR
Sbjct: 195 TCSPHNFDLAKSRGAEEVFDYR 216
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 150/337 (44%), Gaps = 58/337 (17%)
Query: 7 YEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF-PAVPGCDM 65
+ G EVL+ DF P ++V+ +A LN ID+ R L+P+ F P+ G +
Sbjct: 7 FSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSG-LYPAPFLPSGLGAEG 65
Query: 66 AGIVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISF 124
AG+V A G VT+F GD V YG LGA +E V+ E+ + K ++SF
Sbjct: 66 AGVVEAVGDEVTRFKVGDRVAYGT----------GPLGAYSEVHVLPEANLVKLADSVSF 115
Query: 125 EEAASL---PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
E+AA+L L VQ + +T K G+ I AGGVG+L Q AK + ++ T
Sbjct: 116 EQAAALMLKGLTVQYLLR--QTYQVKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGT 171
Query: 182 TSTP-KVEFVKELGADKVIDYRKTKYEDIE---------EKFDVLYDTIGD--------- 222
S+P K K LGA + IDY +ED+ +K V+YD +G
Sbjct: 172 VSSPEKAAHAKALGAWETIDY---SHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDS 228
Query: 223 -CKNSFVVAKDNA--PIVDITWP-PSHPRAIYSSLTVSGE----------ILEKLRPFIE 268
VV+ NA P+ + + ++Y + G + ++L +
Sbjct: 229 VAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLA 288
Query: 269 SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
SGKLK +D Y KD +A L R G ++
Sbjct: 289 SGKLK--VDGIEQYALKDAAKAQIELSARRTTGSTIL 323
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 23/213 (10%)
Query: 9 EYGPKEVLKL-GDFPLPTPQHDQLLVQVRAAALNPIDSKRR-----QRPLFPSDFPAVPG 62
E+G EVLKL D +P P+ Q+L++V A +NP+++ R ++PL P PG
Sbjct: 37 EFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY----TPG 92
Query: 63 CDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNI 122
D+AG++ A G + + F GD V+ + G AE+ + + + K P+ +
Sbjct: 93 SDVAGVIEAVGDNASAFKKGDRVFTSSTIS---------GGYAEYALAADHTVYKLPEKL 143
Query: 123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
F++ A++ + TA +A K G+++ + G +GGVG Q+A+ + ++ T
Sbjct: 144 DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY--GLKILGT 201
Query: 182 TSTPKVE-FVKELGADKVIDYRKTKYEDIEEKF 213
T + + V + GA +V ++R+ Y D +K+
Sbjct: 202 AGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKY 234
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 14 EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
EV P P DQ+ V+V A A+NP D+ R + P F G D AG VVA G
Sbjct: 22 EVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATPWAFL---GTDYAGTVVAVG 78
Query: 74 TSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLA 133
+ VT GD VYG + + GA +++ V + AK PK +SFE+AA+LP
Sbjct: 79 SDVTHIQVGDRVYGAQNEMCP--RTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAG 136
Query: 134 VQTAIEGFKTAGFKTGQT-------------IFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
+ TA K G + + GG+ T+ +Q+ + +A
Sbjct: 137 ISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIA 194
Query: 181 TTSTPKVEFVKELGADKVIDYR 202
T S + K GA++V DYR
Sbjct: 195 TCSPHNFDLAKSRGAEEVFDYR 216
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 131/303 (43%), Gaps = 35/303 (11%)
Query: 10 YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPGCDMAGI 68
+G L+L +P PQ +L ++V+A LN ID RQ + P P VPG + +GI
Sbjct: 12 FGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGI 71
Query: 69 VVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAA 128
V A G SV + GD V + ++N A AE + + K P ++SF EAA
Sbjct: 72 VEALGDSVKGYEIGDRVMAFV-NYN---------AWAEVVCTPVEFVYKIPDDMSFSEAA 121
Query: 129 SLPLAVQTA-IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187
+ P+ TA + F+ A + G ++ + GGVG V QL + V T ST K
Sbjct: 122 AFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVT-VFGTASTFKH 180
Query: 188 EFVK-------ELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
E +K + AD V + ++ E + D + DC + DN
Sbjct: 181 EAIKDSVTHLFDRNADYVQEVKRISAEGV--------DIVLDC-----LCGDNTGKGLSL 227
Query: 241 WPPSHPRAIY-SSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRA 299
P +Y SS V+GE + F +S +++P Y+ VI F L
Sbjct: 228 LKPLGTYILYGSSNMVTGET-KSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFK 286
Query: 300 RGK 302
+G+
Sbjct: 287 QGR 289
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 121/246 (49%), Gaps = 38/246 (15%)
Query: 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP 61
Q +E G +V+K D+P+P+ ++LL++ + +N I+S R + ++P + P V
Sbjct: 9 QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFR-KGIYPCEKPYVL 67
Query: 62 GCDMAGIVVAKGTSVTKFNTGDEV-YGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
G + +G VVAKG VT F GD+V Y + F K+ G + K PK
Sbjct: 68 GREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGP-----------VMKLPK 116
Query: 121 NISFEE----AASLPLAVQTAIEGFKTAGF--KTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
S EE AA L L V TA+ F + K G + + AGGVG ++ QL K
Sbjct: 117 GTSDEELKLYAAGL-LQVLTALS-FTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKM--K 172
Query: 175 ASHVVATTST-PKVEFVKELGADKVIDYRKTKYEDIEEK---------FDVLYDTIGDCK 224
+H +A ST K++ KE GA+ +I+ K EDI + D +D++G K
Sbjct: 173 GAHTIAVASTDEKLKIAKEYGAEYLINASK---EDILRQVLKFTNGKGVDASFDSVG--K 227
Query: 225 NSFVVA 230
++F ++
Sbjct: 228 DTFEIS 233
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 140/346 (40%), Gaps = 60/346 (17%)
Query: 5 WYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPGC 63
W E P + LKL + P+P ++V+ A +LN D + FP VP
Sbjct: 31 WSTETVAPHD-LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPAS 89
Query: 64 DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL------------------GALA 105
D +G+V A G SVT+F GD V I F A G L L G L+
Sbjct: 90 DXSGVVEAVGKSVTRFRPGDRV---ISTF-APGWLDGLRPGTGRTPAYETLGGAHPGVLS 145
Query: 106 EFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLV 165
E++V+ E PK++ EA++LP A TA G +V G GGV
Sbjct: 146 EYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFG 205
Query: 166 IQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKN 225
+Q+AK GA +V ++S K++ LGAD I+ + ED E+ +Y GD
Sbjct: 206 LQIAKA-TGAEVIVTSSSREKLDRAFALGADHGINRLE---EDWVER---VYALTGDRGA 258
Query: 226 SFVVAKDNAPIVDITWPPSHPR------AIYSSLTVSGEI-------------------- 259
++ + + P + VSG +
Sbjct: 259 DHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRA 318
Query: 260 LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
LE L ++ LK ID YKF +V EA +L+ G GKVVI
Sbjct: 319 LEDLVGAVDRLGLKPVIDXR--YKFTEVPEALAHLDRG-PFGKVVI 361
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 138/330 (41%), Gaps = 48/330 (14%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
L++ + +P P Q+LV++ A+ + D + P+ P P +PG + G V A G
Sbjct: 19 LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPP-LPFIPGHEGVGYVAAVG 77
Query: 74 TSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVEESL 114
+ VT+ GD V G + A G + G AE+++ + +
Sbjct: 78 SGVTRVKEGDRV-GIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNY 136
Query: 115 IAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
+ PKN+ F E A + A T +G K + GQ + I G GG+G + +Q A+
Sbjct: 137 VGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQWVAI-SGIGGLGHVAVQYARAM-- 193
Query: 175 ASHVVAT-TSTPKVEFVKELGADKVIDYRKTK-----YEDIEEKFDVLYDTIGDCK--NS 226
HV A K+E ++LGA ++ R+ DI VL + + +
Sbjct: 194 GLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQA 253
Query: 227 FVVAKDNAPIVDITWPPSH-PRAIYS----SLTVSGEI------LEKLRPFIESGKLKAQ 275
+A+ I + PP P I+ L ++G I L++ F G +KA
Sbjct: 254 IGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKAT 313
Query: 276 IDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
I P K D+ + + G+ G++V+
Sbjct: 314 IHPG---KLDDINQILDQMRAGQIEGRIVL 340
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 12 PKEVLKLGDFPLPTPQHDQLLVQVRAAALN----------PIDS-------KRRQRPLFP 54
P++ + L D P+P + LV V A+++N P+ + R
Sbjct: 54 PRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKR 113
Query: 55 SDFP-AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAE-----------------G 96
D P V G D+AG+V+ G V + GDEV + E G
Sbjct: 114 HDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWG 173
Query: 97 KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT---AGFKTGQTIF 153
G LAE +V+ + + KP ++S+EEAA+ L TA + AG K G +
Sbjct: 174 FETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVL 233
Query: 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVID-----YRKTKYE 207
I G +GG+G+ Q A G ++ + S+P K E + +GA+ +ID YR K E
Sbjct: 234 IWGASGGLGSYATQFA--LAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDE 291
Query: 208 DIEE 211
+ ++
Sbjct: 292 NTQD 295
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 13 KEVLKLGDFPLPTPQHDQLLVQVRAAALN----------PI-------DSKRRQRPLFPS 55
++ L+LG+ P+P D++LV V A+++N PI + R+
Sbjct: 47 RKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRH 106
Query: 56 DFP-AVPGCDMAGIVVAKGTSVTKFNTGDEV--------------YGNIQ---DFNAEGK 97
D P V G D +G+VV G V ++ GD V +G+ + A G
Sbjct: 107 DQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGF 166
Query: 98 LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF---KTAGFKTGQTIFI 154
G LAE+ VV S + KP ++++EEAA PL TA + A K G + I
Sbjct: 167 ETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLI 226
Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
G +GG+G+ IQ K+ G V +S K V+ LG D VI+
Sbjct: 227 WGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCDLVIN 271
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 139/339 (41%), Gaps = 58/339 (17%)
Query: 13 KEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVV 70
KE LK+ + PT + ++LV+++A + D + P+ P P +PG + GIV
Sbjct: 10 KEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-LPLIPGHEGVGIVE 68
Query: 71 AKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVE 111
G VT GD V G ++A G G AE+
Sbjct: 69 EVGPGVTHLKVGDRV-GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 ESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH 171
+ K P N+SFEEAA + A T + K G K G+ + I G GG+G + +Q AK
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIGGLGHVAVQYAKA 186
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVA- 230
G + V K+E KELGAD V++ K E+ + + +G + V A
Sbjct: 187 M-GLNVVAVDIGDEKLELAKELGADLVVNPLK------EDAAKFMKEKVGGVHAAVVTAV 239
Query: 231 ------------KDNAPIVDITWPPSH-PRAIYSS----LTVSGEI------LEKLRPFI 267
+ V + PP P I+ + + + G I L++ F
Sbjct: 240 SKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFA 299
Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
GK+K I+ + + E F + G+ G+VV++
Sbjct: 300 AEGKVKTIIEVQ---PLEKINEVFDRMLKGQINGRVVLT 335
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 12 PKEVLKLGDFPLPTPQHDQLLVQVRAAALN----------PIDS---KRRQRPLFP---- 54
P++ + L + P+P + LV V A+++N P+ + R L P
Sbjct: 72 PRKSIHLDEVPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKR 131
Query: 55 SDFP-AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAE-----------------G 96
D P + G D+AG+V+ G V + GDEV + E G
Sbjct: 132 HDLPYHIIGSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWG 191
Query: 97 KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT---AGFKTGQTIF 153
G LAE +V+ + + KPK++++EEAA+ L TA + A K G +
Sbjct: 192 FETNFGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVL 251
Query: 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYE 207
I G +GG+G+ Q A G ++ + S+P K E + +GA+ +ID Y+
Sbjct: 252 IWGASGGLGSYATQFA--LAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYK 304
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 141/346 (40%), Gaps = 60/346 (17%)
Query: 3 NAWYYEEYGPKEV--LKLGDFPLPT-PQHD-QLLVQVRAAALNPIDSKRRQRPLFPSDFP 58
W E P + L L D P T P D ++ + +RAA +N D+ + +P
Sbjct: 209 TGWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDAL-----IALGMYP 263
Query: 59 AVP--GCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
V G + AG+VV G VT GD V G I K G LA V + ++
Sbjct: 264 GVASLGSEGAGVVVETGPGVTGLAPGDRVMGMIP--------KAFGPLA---VADHRMVT 312
Query: 117 KKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA 175
+ P SF AAS+P+ TA AG + G+++ + AGGVG IQLA+H
Sbjct: 313 RIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHL--G 370
Query: 176 SHVVATTSTPK---VEFVKE-LGADKVIDYRK-----TKYEDIEEKFDVLYDTIGDCKNS 226
+ V AT S K VE +E L + + D+ + T ++ + L D
Sbjct: 371 AEVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLR 430
Query: 227 FVV------------AKDNAPIVDITWPPSHPRAIYSSL-TVS------GEILEKLRPFI 267
+ +D + D +HP Y + TV GE+L +L
Sbjct: 431 MLPRGGRFLELGKTDVRDPVEVAD-----AHPGVSYQAFDTVEAGPQRIGEMLHELVELF 485
Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFPYTES 313
E L+ P + + EA R+L R GK+V++ P ++
Sbjct: 486 EGRVLEPL--PVTAWDVRQAPEALRHLSQARHVGKLVLTMPPVWDA 529
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 138/339 (40%), Gaps = 58/339 (17%)
Query: 13 KEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVV 70
KE LK+ + PT + ++LV+++A + D + P+ P P +PG + GIV
Sbjct: 10 KEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-LPLIPGHEGVGIVE 68
Query: 71 AKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVE 111
G VT GD V G ++A G G AE+
Sbjct: 69 EVGPGVTHLKVGDRV-GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 ESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH 171
+ K P N+SFEEAA + A T + K G K G+ + I G GG G + +Q AK
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIGGFGHVAVQYAKA 186
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVA- 230
G + V K+E KELGAD V++ K E+ + + +G + V A
Sbjct: 187 M-GLNVVAVDIGDEKLELAKELGADLVVNPLK------EDAAKFMKEKVGGVHAAVVTAV 239
Query: 231 ------------KDNAPIVDITWPPSH-PRAIYSS----LTVSGEI------LEKLRPFI 267
+ V + PP P I+ + + + G I L++ F
Sbjct: 240 SKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFA 299
Query: 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306
GK+K I+ + + E F + G+ G+VV++
Sbjct: 300 AEGKVKTIIEVQ---PLEKINEVFDRMLKGQINGRVVLT 335
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 139/341 (40%), Gaps = 59/341 (17%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
LKL D P+P P+ Q+L+++ AA + D RQ P G ++AG
Sbjct: 13 LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGK-------------------LKQLGALAEFI 108
+ G V ++ GD V + + EG + GA AE++
Sbjct: 73 RIEEVGDEVVGYSKGDLV--AVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
+V K + +S EAA L + T + A +T+ ++G GG+GT+ IQ+
Sbjct: 131 LVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLY----DTIGDCK 224
AK GA+ + +E K GAD VI+ + + + E + D + D
Sbjct: 191 AKAVSGATIIGVDVREEALEAAKRAGADYVIN--ASSQDPVSEIRRITQGKGADAVIDLN 248
Query: 225 NS--------FVVAKDNAPIV------DITWPPSHPRAIYSSLTVSGEILEKLRPFI--- 267
NS +V+AK ++ D+ + P + + G ++ F+
Sbjct: 249 NSEKTLSIYPYVLAKQGKYVMVGLFGADLKY--HAPLITLNEVQFIGSLVGNQSDFLGIM 306
Query: 268 ---ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
E+GK+K + T K ++ EA LE +A G+ V+
Sbjct: 307 SLAEAGKVKPMVTKT--MKLEEANEAIDNLENFKAVGRQVL 345
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 4 AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC 63
A ++++ G E L + + P+P ++L++V A+ALN D +RQ P PG
Sbjct: 9 AVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPP-----PGA 63
Query: 64 DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNIS 123
+ A G V + G + + I D L G A+++ V E L+ P+ ++
Sbjct: 64 SNILGLEASG-HVAELGPGCQGHWKIGDTAM--ALLPGGGQAQYVTVPEGLLMPIPEGLT 120
Query: 124 FEEAASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
+AA++P A TA + G + G + I G GVGT IQL + GA +V
Sbjct: 121 LTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAG 179
Query: 183 STPKVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDC---KNSFVVAKDN 233
S K++ ++LGA +Y+K + + KF +++ D IG KN +A D
Sbjct: 180 SQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDG 239
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 19/245 (7%)
Query: 4 AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC 63
A ++++ G E L + + P+P ++L++V A+ALN D +RQ P PG
Sbjct: 25 AVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPP-----PGA 79
Query: 64 DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNIS 123
+ A G V + G + + I D L G A+++ V E L+ P+ ++
Sbjct: 80 SNILGLEASG-HVAELGPGCQGHWKIGDTAM--ALLPGGGQAQYVTVPEGLLMPIPEGLT 136
Query: 124 FEEAASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182
+AA++P A TA + G + G + I G GVGT IQL + GA +V
Sbjct: 137 LTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAG 195
Query: 183 STPKVEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDCKNSFVVAKDNAPI 236
S K++ ++LGA +Y+K + + KF +++ D IG S+ N
Sbjct: 196 SQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG---GSYWEKNVNCLA 252
Query: 237 VDITW 241
+D W
Sbjct: 253 LDGRW 257
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 105/249 (42%), Gaps = 33/249 (13%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF----PAVPGCDMAGIVVA 71
L+L P+P P+ D++L+Q+ + D + +DF P V G + +G VV
Sbjct: 16 LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRI-ADFIVKDPMVIGHEASGTVVK 74
Query: 72 KGTSVTKFNTGDEVY------GNIQDFNAEGKLKQL------------GALAEFIVVEES 113
G +V GD V F EGK G LA + V
Sbjct: 75 VGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAAD 134
Query: 114 LIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHF 172
K P N+S EE A L PL+V + + AG + G T+ ++G AG +G LV LA
Sbjct: 135 FCHKLPDNVSLEEGALLEPLSV--GVHACRRAGVQLGTTVLVIG-AGPIG-LVSVLAAKA 190
Query: 173 YGASHVVATTSTPKVEFVKELGAD--KVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVVA 230
YGA V S ++E K GAD V+D K + I E+ + IGD N +
Sbjct: 191 YGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER---IRSAIGDLPNVTIDC 247
Query: 231 KDNAPIVDI 239
N + I
Sbjct: 248 SGNEKCITI 256
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 139/337 (41%), Gaps = 56/337 (16%)
Query: 7 YEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMA 66
+ ++G EVL+ +F P +++ V+ +A +N ID+ R P P+ G + A
Sbjct: 7 FHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAA 66
Query: 67 GIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE 126
GIV G+ V GD V A+ L ++ I + +++ P ISFE+
Sbjct: 67 GIVSKVGSGVKHIKAGDRV------VYAQSALGAYSSVHNIIADKAAIL---PAAISFEQ 117
Query: 127 AASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185
AA+ L T KT K + AGGVG + Q AK GA + +
Sbjct: 118 AAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQ 176
Query: 186 KVEFVKELGADKVIDYRKTKYEDIEEKFD---------VLYDTIG--------DC----- 223
K + + GA +VI+YR+ ED+ E+ V+YD++G DC
Sbjct: 177 KAQSALKAGAWQVINYRE---EDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRG 233
Query: 224 ------KNSFVVAKDNAPIVD------ITWPPSHPRAIYSSLTVSGEILE---KLRPFIE 268
+S V N I++ +T P ++ +T E+ E +L I
Sbjct: 234 LMVSFGNSSGAVTGVNLGILNQKGSLYVTRP-----SLQGYITTREELTEASNELFSLIA 288
Query: 269 SGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
SG +K + Y KD A LE+ +G ++
Sbjct: 289 SGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 20/241 (8%)
Query: 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSK-RRQRPLFPSDFPAV 60
W Y+ + L +P D +LVQ +A +NP+D K + P+ S+ V
Sbjct: 5 HQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSN-GHV 61
Query: 61 PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
PG D AG++V G V G V + LK+ G+ AEF V+ + P
Sbjct: 62 PGVDGAGVIVKVGAKVDSKXLGRRVAYHT-------SLKRHGSFAEFTVLNTDRVXTLPD 114
Query: 121 NISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA 180
N+SFE AA+LP + TA + F+ + + IV G G + L + A +VV
Sbjct: 115 NLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIV----GFGAVNNLLTQXLNNAGYVVD 170
Query: 181 TTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFVV--AKDNAPIVD 238
S + L A + + + + + +K+ ++D + + +V K N I+
Sbjct: 171 LVSA---SLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQNAAALVPSLKANGHIIC 227
Query: 239 I 239
I
Sbjct: 228 I 228
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 132/331 (39%), Gaps = 50/331 (15%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
L + + P+P P Q+ V++ A+ + D + P+ P+ P +PG + G V A G
Sbjct: 15 LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPT-LPFIPGHEGVGYVSAVG 73
Query: 74 TSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVEESL 114
+ V++ GD V G ++A G + G E++V + +
Sbjct: 74 SGVSRVKEGDRV-GVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNY 132
Query: 115 IAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
+ P + F E A + A T +G K + GQ + ++ G GG+G + +Q A+ G
Sbjct: 133 VGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWV-VISGIGGLGHVAVQYARAM-G 190
Query: 175 ASHVVATTSTPKVEFVKELGADKVIDYRKTK-----YEDIEEKFDVLY---------DTI 220
K+ + LGA+ ++ R T ++I VL I
Sbjct: 191 LRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAI 250
Query: 221 GDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEI------LEKLRPFIESGKLKA 274
G + +A + P D P + +T+ G I L++ F G +KA
Sbjct: 251 GMVRRGGTIALNGLPPGDFGTPIFD--VVLKGITIRGSIVGTRSDLQESLDFAAHGDVKA 308
Query: 275 QIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
+ K DV + F L G+ G+VV+
Sbjct: 309 TVSTA---KLDDVNDVFGRLREGKVEGRVVL 336
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 136/335 (40%), Gaps = 56/335 (16%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGCDMAGIVVAKG 73
L + + P+P P Q+ V ++A+ + D + P+ P+ P +PG + G V A G
Sbjct: 38 LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNP-PFIPGHEGVGFVSAVG 96
Query: 74 TSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFIVVEESL 114
+ V GD V G + A G + G AE++V + +
Sbjct: 97 SGVKHVKEGDRV-GIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVNGGFAEYVVADPNF 155
Query: 115 IAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
+ PKNI F E A + A T +G K K G + ++ G GG+G + +Q A+ G
Sbjct: 156 VGHLPKNIDFNEIAPVLCAGVTVYKGLKVTDTKPGDWV-VISGIGGLGHMAVQYARAM-G 213
Query: 175 ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKNSFV------ 228
+ K++ + LGA ++ + + + +T G + V
Sbjct: 214 LNVAAVDIDDRKLDLARRLGATVTVNAKTVA----DPAAYIRKETDGGAQGVLVTAVSPK 269
Query: 229 --------VAKDNAPIVDITWPPSHPRAIY----SSLTVSGEI------LEKLRPFIESG 270
VA+ ++ P P +I+ + +TV G I L++ F G
Sbjct: 270 AFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLDLQESLDFAADG 329
Query: 271 KLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
K+KA I TG K +D+ F + G G++V+
Sbjct: 330 KVKATIQ-TG--KLEDINAIFDDMRQGNIEGRIVM 361
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 29/222 (13%)
Query: 6 YYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID--SKRRQRPLFPSDFPAVPGC 63
+YE +G L+ D P+P P+ ++LL+ V+ + + D + PL P P V G
Sbjct: 11 FYESHGK---LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPL-PVKLPLVGGH 66
Query: 64 DMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL--------------------GA 103
+ AG+VV G +V + GD Y I+ N + G+
Sbjct: 67 EGAGVVVGMGENVKGWKIGD--YAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGS 124
Query: 104 LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGT 163
++ + A P+ + A + A T + K+A G + I G AGG+G+
Sbjct: 125 FQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGS 184
Query: 164 LVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK 205
L +Q AK G + K E + +G + ID+ K K
Sbjct: 185 LAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEVFIDFTKEK 225
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 30/234 (12%)
Query: 10 YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF----PAVPGCDM 65
+GP + L+L ++P+P P +++L+++ + + D Q DF P V G +
Sbjct: 13 HGPGD-LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRI-GDFVVKKPMVLGHEA 70
Query: 66 AGIVVAKGTSVTKFNTGDEV------------YGNIQDFNAEGKL------KQLGALAEF 107
+G VV G+ V GD V + I +N + G L F
Sbjct: 71 SGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRF 130
Query: 108 IVVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVI 166
+ K P N++FEE A + PL+V I + AG G + + G AG +G LV
Sbjct: 131 YKHNANFCYKLPDNVTFEEGALIEPLSV--GIHACRRAGVTLGNKVLVCG-AGPIG-LVN 186
Query: 167 QLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDT 219
LA GA+ VV T S ++ KE+GAD +++ E+I +K + L +
Sbjct: 187 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGLLGS 240
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 10 YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMA 66
+GP + L+L ++P+P P +++L+++ + + D + F P V G + +
Sbjct: 14 HGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEAS 72
Query: 67 GIVVAKGTSVTKFNTGDEV------------YGNIQDFNAEGKL------KQLGALAEFI 108
G V G+SV GD V + + +N + G L F
Sbjct: 73 GTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFY 132
Query: 109 VVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
+ K P N++FEE A + PL+V I + G G + + G AG +G + +
Sbjct: 133 KHNAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-AGPIGMVTLL 189
Query: 168 LAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD 214
+AK A VV S ++ KE+GAD V+ K ++I K +
Sbjct: 190 VAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 4 AWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-- 61
A E G V +G +P P D LLV+V A + D R L +FP+ P
Sbjct: 26 AVRLESVGNISVRNVG---IPEPGPDDLLVKVEACGICGTD-----RHLLHGEFPSTPPV 77
Query: 62 --GCDMAGIVVAKGTSVTKFNTGDEVYGN------------------IQDFNAEGKLKQL 101
G + GIVV G++V G + G+ ++ A G + +
Sbjct: 78 TLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG-IHRD 136
Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASL---------PLAVQTAIEGFKTAGFKTGQTI 152
G AE+++V P+ +FE +L PLA + G +G K G T+
Sbjct: 137 GGFAEYVLV--------PRKQAFEIPLTLDPVHGAFCEPLA--CCLHGVDLSGIKAGSTV 186
Query: 153 FIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
I+GG G +G L +QLA+ + +++T K +E+GA +D
Sbjct: 187 AILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVD 233
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 10 YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMA 66
+GP + L+L ++P+P P +++L++ + + D + F P V G + +
Sbjct: 14 HGPGD-LRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEAS 72
Query: 67 GIVVAKGTSVTKFNTGDEVY------GNIQDFNAEGKLK------------QLGALAEFI 108
G V G+SV GD V +F G+ G L F
Sbjct: 73 GTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDDGNLCRFY 132
Query: 109 VVEESLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
+ K P N++FEE A + PL+V I + G G + + G AG +G + +
Sbjct: 133 KHNAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-AGPIGXVTLL 189
Query: 168 LAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD 214
+AK A VV S ++ KE+GAD V+ K ++I K +
Sbjct: 190 VAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 25 TPQHDQLLVQVRAAALNPIDSKRRQ---RPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81
+P Q+ ++ A +N +D+ R PL + P V G + A +V G VT F
Sbjct: 25 SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTV 84
Query: 82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEA--ASLPLAVQTAIE 139
G+ V L LGA ++ + + K PK++ ++ A L L TA
Sbjct: 85 GERVCTC---------LPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQY 135
Query: 140 GF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV 198
+T K G + I AGG+G +++ A+H GA+ + ++ K E ++LG
Sbjct: 136 LLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLGCHHT 194
Query: 199 IDYRKTKYEDIEEKF------DVLYDTIG 221
I+Y + ++ + DV+YD+IG
Sbjct: 195 INYSTQDFAEVVREITGGKGVDVVYDSIG 223
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 20 DFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-GCDMAGIVVAKGTSVT- 77
D P+P P LLV+ R +N D PS P G + G VVA G S +
Sbjct: 45 DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASA 104
Query: 78 KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA 137
++ G V G+ AE+ VV S+ P E +L ++ TA
Sbjct: 105 RYTVGQAV-----------AYMAPGSFAEYTVVPASIATPVPS--VKPEYLTLLVSGTTA 151
Query: 138 IEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGA 195
K G G+ + + AGG G +QL+K HV+ T S+ K F+K LG
Sbjct: 152 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKK--AKCHVIGTCSSDEKSAFLKSLGC 209
Query: 196 DKVIDYRKTKY-----EDIEEKFDVLYDTIG 221
D+ I+Y+ ++ E DV+Y+++G
Sbjct: 210 DRPINYKTEPVGTVLKQEYPEGVDVVYESVG 240
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 20 DFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-GCDMAGIVVAKGTSVT- 77
D P+P P LLV+ R +N D PS P G + G VVA G S +
Sbjct: 24 DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASA 83
Query: 78 KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA 137
++ G V G+ AE+ VV S+ P E +L ++ TA
Sbjct: 84 RYTVGQAV-----------AYMAPGSFAEYTVVPASIATPVPS--VKPEYLTLLVSGTTA 130
Query: 138 IEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGA 195
K G G+ + + AGG G +QL+K HV+ T S+ K F+K LG
Sbjct: 131 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKK--AKCHVIGTCSSDEKSAFLKSLGC 188
Query: 196 DKVIDYRKTKY-----EDIEEKFDVLYDTIG 221
D+ I+Y+ ++ E DV+Y+++G
Sbjct: 189 DRPINYKTEPVGTVLKQEYPEGVDVVYESVG 219
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 20 DFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP-GCDMAGIVVAKGTSVT- 77
D P+P P LLV+ R +N D PS P G + G VVA G S +
Sbjct: 53 DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASA 112
Query: 78 KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA 137
++ G V G+ AE+ VV S+ P E +L ++ TA
Sbjct: 113 RYTVGQAV-----------AYMAPGSFAEYTVVPASIATPVPS--VKPEYLTLLVSGTTA 159
Query: 138 IEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGA 195
K G G+ + + AGG G +QL+K HV+ T S+ K F+K LG
Sbjct: 160 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKK--AKCHVIGTCSSDEKSAFLKSLGC 217
Query: 196 DKVIDYRKTKY-----EDIEEKFDVLYDTIG 221
D+ I+Y+ ++ E DV+Y+++G
Sbjct: 218 DRPINYKTEPVGTVLKQEYPEGVDVVYESVG 248
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 142/344 (41%), Gaps = 65/344 (18%)
Query: 14 EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDF--PAVPGCDMAGIVVA 71
E L + D +P PQ +++L+++ A + D + + F P + G + AG +V
Sbjct: 14 EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVE 73
Query: 72 KGTSVTKFNTGDEV--YGNIQDFNA----EGKLK----QL-------GALAEFIVVEESL 114
G + K GD V Y D EGK Q+ G +E+++V+ S
Sbjct: 74 VG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSR 132
Query: 115 IAKKPKNISFEEAASLPLAVQTAIEGFKTAG---FKTGQTIFIVGGAGGVGTLVIQLAKH 171
K ++S EAA L A T++ + A K + + IV G GG+ IQ+ K
Sbjct: 133 WLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKA 192
Query: 172 FYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKF------DVLYDTIGDCK 224
+V + + K +F ELGAD V + + E + K + D +G +
Sbjct: 193 LMKNITIVGISRSKKHRDFALELGADYVSEMKDA--ESLINKLTDGLGASIAIDLVGTEE 250
Query: 225 NSF----VVAKDNAPIV--------------DITWPPSHPRAIYSSLTVSGEILEKLRPF 266
++ ++A++ A I+ W + Y SL LE +
Sbjct: 251 TTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLND----LEDVVRL 306
Query: 267 IESGKLKAQIDPTGPYKFK----DVIEAFRYLETGRARGKVVIS 306
ESGK+K PY K D+ +AF L+ GR G+ VI+
Sbjct: 307 SESGKIK-------PYIIKVPLDDINKAFTNLDEGRVDGRQVIT 343
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTG--QTIFIVGGAG 159
G +AE +V K P + EA+S+ A T + K +G K G Q IF GAG
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIF---GAG 173
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
G+G L IQ AK+ +GA + + K+ K++GAD +I+
Sbjct: 174 GLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIIN 214
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTG--QTIFIVGGAG 159
G +AE +V K P + EA+S+ A T + K +G K G Q IF GAG
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIF---GAG 173
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
G+G L IQ AK+ +GA + + K+ K++GAD I+
Sbjct: 174 GLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTIN 214
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 102 GALAEFIVVEESLIAKKPKNISFE---EAASLPLAVQTAIEGFKTAG--FKTGQTIFIVG 156
G AEF+ + K PK+IS E E A L A TA K A G + IVG
Sbjct: 135 GGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG 194
Query: 157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE----- 211
GG+G + +QL K A+ + K++ + LGAD V+D R+ + + E
Sbjct: 195 -VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGR 253
Query: 212 KFDVLYDTIGDCKNS----FVVAKDNAPIV-----DITWPPSHPRAIYSSLTVSGEI--- 259
+V D +G +++ + I+ ++ +P R I S ++ G +
Sbjct: 254 GVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGELRFPTI--RVISSEVSFEGSLVGN 311
Query: 260 ---LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
L +L GK++ ++D +K ++ + LE G G+ V+
Sbjct: 312 YVELHELVTLALQGKVRVEVD---IHKLDEINDVLERLEKGEVLGRAVL 357
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 87/217 (40%), Gaps = 42/217 (19%)
Query: 26 PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
PQ D++LV+V A + D R + +P PAV G + +GI+ A G +VT+ GD V
Sbjct: 29 PQGDEVLVKVVATGMCHTDLIVRDQK-YPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHV 87
Query: 86 ---YG----------------------NIQDFNAEGKLKQL--------------GALAE 106
YG N ++EG + A
Sbjct: 88 VLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFAT 147
Query: 107 FIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVI 166
+ + E+ K K++ E L +QT A T + F+ GAG VG L
Sbjct: 148 YALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVG-LSA 206
Query: 167 QLAKHFYGASHVVATTST-PKVEFVKELGADKVIDYR 202
LA GAS ++A ++E K+LGA VI+ +
Sbjct: 207 LLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK 243
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
G EF V ++ +A PK I E A +P + T G + A + G ++ ++ G G
Sbjct: 118 GVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
VG + I AK GA ++ S P VE K GA +++Y+ D V+
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVD-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG------KL 272
T G + ++A + + P I S++ G L P +E G +
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTI 290
Query: 273 KAQIDPTGPYKFKDVIEAFRY 293
K + P G + + +I+ Y
Sbjct: 291 KGGLCPGGRLRMERLIDLVFY 311
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 23/220 (10%)
Query: 4 AWYYEEYG-PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRP--LFPSDFPAV 60
A Y +G P +V++L + L + + V++ AA +NP D Q L P + PAV
Sbjct: 16 ALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLP-ELPAV 74
Query: 61 PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
G + VVA G++VT GD V I G + E + EE+LI + P
Sbjct: 75 GGNEGVAQVVAVGSNVTGLKPGDWV---IPANAGLGTWR-----TEAVFSEEALI-QVPS 125
Query: 121 NISFEEAASL---PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
+I + AA+L P + F+ + G ++ GVG VIQ+A G
Sbjct: 126 DIPLQSAATLGVNPCTAYRMLMDFEQ--LQPGDSVIQNASNSGVGQAVIQIAAAL-GLRT 182
Query: 178 VVATTSTPKVE----FVKELGADKVIDYRKTKYEDIEEKF 213
+ P ++ +K LGA+ VI + + +++ F
Sbjct: 183 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 222
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 23/220 (10%)
Query: 4 AWYYEEYG-PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRP--LFPSDFPAV 60
A Y +G P +V++L + L + + V++ AA +NP D Q L P + PAV
Sbjct: 29 ALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLP-ELPAV 87
Query: 61 PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPK 120
G + VVA G++VT GD V I G + E + EE+LI + P
Sbjct: 88 GGNEGVAQVVAVGSNVTGLKPGDWV---IPANAGLGTWR-----TEAVFSEEALI-QVPS 138
Query: 121 NISFEEAASL---PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
+I + AA+L P + F+ + G ++ GVG VIQ+A G
Sbjct: 139 DIPLQSAATLGVNPCTAYRMLMDFEQ--LQPGDSVIQNASNSGVGQAVIQIAAAL-GLRT 195
Query: 178 VVATTSTPKVE----FVKELGADKVIDYRKTKYEDIEEKF 213
+ P ++ +K LGA+ VI + + +++ F
Sbjct: 196 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 235
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 58 PAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
P VPG D+AG+VV+ + +F GDEV + + G +E+ + +
Sbjct: 61 PFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIG----VTHFGGYSEYARLHGEWLVP 114
Query: 118 KPKNISFEEAASLPLAVQTA---IEGFKTAGFKTGQT-IFIVGGAGGVGTLVIQ-LAKHF 172
PK ++ +EA ++ A TA I + G + + + G GGVG+L + LAK
Sbjct: 115 LPKGLTLKEAXAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSXLAKRG 174
Query: 173 YGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI----EEKFDVLYDTIGDCKNSFV 228
Y +T + ++++ LGA +V+ E I ++++ D +G + V
Sbjct: 175 YTVE--ASTGKAAEHDYLRVLGAKEVLAREDVXAERIRPLDKQRWAAAVDPVGGRTLATV 232
Query: 229 VAKDNAPIVDITWPPSHPRAI-YSSLTVSGEILEKLRPFIESGKLKAQID 277
+++ + A+ S LT E+ + PFI G ID
Sbjct: 233 LSRXR-----------YGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGID 271
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
G EF V ++ +A PK I E A +P + T G + A + G ++ ++ G G
Sbjct: 118 GVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
VG + I AK GA ++ S P VE K GA +++Y+ D V+
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVD-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG------KL 272
T G + ++A + + P I S++ G L P +E G +
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTI 290
Query: 273 KAQIDPTGPYKFKDVIEAFRY 293
K + P G + + +I+ Y
Sbjct: 291 KGGLCPGGRLRMERLIDLVFY 311
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 12 PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPG 62
P+E L L D P+P P ++LV+V AA++ D ++ R RP P V G
Sbjct: 9 PEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRP------PLVTG 62
Query: 63 CDMAGIVVAKGTSVTKFNTGDEVY---------------GNIQ-DFNAE-GKLKQLGALA 105
+ +G+V A G V + GD V GN N + + + G A
Sbjct: 63 HEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFA 122
Query: 106 EFIVVEESLIAKKPKNISFEEAASL-PL--AVQTAIEGFKTAGFKTGQTIFIVGGAGGVG 162
E++VV PK++ FE AA L P AV T G +G+++ I GAG +G
Sbjct: 123 EYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGV----SGKSVLIT-GAGPIG 177
Query: 163 TLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVID 200
+ + + GA ++ + P ++ F + AD++++
Sbjct: 178 LMAAMVVRA-SGAGPILVSDPNPYRLAFARPY-ADRLVN 214
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 133/339 (39%), Gaps = 55/339 (16%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
L L + +P P+ Q+L++V AA + D RQ P G ++AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
+ G V ++ GD V + + EG GA AE++
Sbjct: 73 KIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
+V K + ++ EAA L + T + A +T+ +VG GG+GT+ +Q+
Sbjct: 131 IVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID----------YRKTKYEDIEEKFDVLYD 218
AK GA+ + VE K GAD VI+ R T+ + ++ D+ Y
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYS 250
Query: 219 TIGDCKNSFVVAKDNAPIV------DITWPPSHPRAIYSSLTVSGEILEKLRPFI----- 267
+AK ++ D+ + P S + G ++ F+
Sbjct: 251 EKTLSVYPKALAKQGKYVMVGLFGADLHY--HAPLITLSEIQFVGSLVGNQSDFLGIMRL 308
Query: 268 -ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
E+GK+K I T K ++ EA LE +A G+ V+
Sbjct: 309 AEAGKVKPMITKT--MKLEEANEAIDNLENFKAIGRQVL 345
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 132/339 (38%), Gaps = 55/339 (16%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
L L + +P P+ Q+L++V AA + D RQ P G ++AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
+ G V ++ GD V + EG GA AE++
Sbjct: 73 KIEEVGDEVVGYSKGDLV--AVNPLQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
+V K + ++ EAA L + T + A +T+ +VG GG+GT+ +Q+
Sbjct: 131 IVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID----------YRKTKYEDIEEKFDVLYD 218
AK GA+ + VE K GAD VI+ R T+ + ++ D+ Y
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYS 250
Query: 219 TIGDCKNSFVVAKDNAPIV------DITWPPSHPRAIYSSLTVSGEILEKLRPFI----- 267
+AK ++ D+ + P S + G ++ F+
Sbjct: 251 EKTLSVYPKALAKQGKYVMVGLFGADLHY--HAPLITLSEIQFVGSLVGNQSDFLGIMRL 308
Query: 268 -ESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
E+GK+K I T K ++ EA LE +A G+ V+
Sbjct: 309 AEAGKVKPMITKT--MKLEEANEAIDNLENFKAIGRQVL 345
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 29/212 (13%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
L L + +P P+ Q+L++V AA + D RQ P G ++AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
+ G V ++ GD V + + EG GA AE++
Sbjct: 73 KIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
+V K + ++ EAA L + T + A +T+ +VG GG+GT+ +Q+
Sbjct: 131 IVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID 200
AK GA+ + VE K GAD VI+
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVIN 222
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 82/204 (40%), Gaps = 40/204 (19%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
G +E V E+ +A P++I E+A L V T G + A K G T+ ++ G G
Sbjct: 118 GVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
VG + + A H GA + A S + E GA +I+Y K DI E+ +L
Sbjct: 177 PVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINY---KNGDIVEQ--ILKA 230
Query: 219 TIGDCKNSFVVA----------------------------KDNAPIVDITWPPSHP-RAI 249
T G + V+A DN PI W + I
Sbjct: 231 TDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHI 290
Query: 250 YSSLTVSGEI-LEKLRPFIESGKL 272
+ LT G + +EKL I +GKL
Sbjct: 291 HGGLTPGGRVRMEKLASLISTGKL 314
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 33/205 (16%)
Query: 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP 61
AW + G L+L D P P + +++++V A LN D R
Sbjct: 1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRL------------ 46
Query: 62 GCDMAGIVVAKGTSVTK----FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
G +T+ F G EV G ++ + Q G LAE + V + +
Sbjct: 47 -----------GAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQ-GGLAERVAVPKGALLP 94
Query: 118 KPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
P+ +S EEAA+ P++ TA K A + G+ + + AG +GT +Q+A+
Sbjct: 95 LPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAM--GLR 152
Query: 178 VVATTSTP-KVEFVKELGADKVIDY 201
V+A S P K+ LGA++ Y
Sbjct: 153 VLAAASRPEKLALPLALGAEEAATY 177
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 33/205 (16%)
Query: 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP 61
AW + G L+L D P P + +++++V A LN D R
Sbjct: 1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRL------------ 46
Query: 62 GCDMAGIVVAKGTSVTK----FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
G +T+ F G EV G ++ + Q G LAE + V + +
Sbjct: 47 -----------GAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQ-GGLAERVAVPKGALLP 94
Query: 118 KPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH 177
P+ +S EEAA+ P++ TA K A + G+ + + AG +GT +Q+A+
Sbjct: 95 LPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAM--GLR 152
Query: 178 VVATTSTP-KVEFVKELGADKVIDY 201
V+A S P K+ LGA++ Y
Sbjct: 153 VLAAASRPEKLALPLALGAEEAATY 177
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 39/212 (18%)
Query: 17 KLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPGCDMAG 67
+L + +P P ++L++V A ++ D ++ R +P P + G ++AG
Sbjct: 17 ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP------PQIXGHEVAG 70
Query: 68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
VV G V GD Y +++ GK G AE+
Sbjct: 71 EVVEIGPGVEGIEVGD--YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYA 128
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
VV I K PK+I E A+L + A++ AG +G+++ I G AG +G L I +
Sbjct: 129 VVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPISGKSVLITG-AGPLGLLGIAV 185
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID 200
AK +V+ S + E K++GAD VI+
Sbjct: 186 AKASGAYPVIVSEPSDFRRELAKKVGADYVIN 217
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 39/212 (18%)
Query: 17 KLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPGCDMAG 67
+L + +P P ++L++V A ++ D ++ R +P P + G ++AG
Sbjct: 18 ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP------PQIXGHEVAG 71
Query: 68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
VV G V GD Y +++ GK G AE+
Sbjct: 72 EVVEIGPGVEGIEVGD--YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYA 129
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
VV I K PK+I E A+L + A++ AG +G+++ I G AG +G L I +
Sbjct: 130 VVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPISGKSVLITG-AGPLGLLGIAV 186
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID 200
AK +V+ S + E K++GAD VI+
Sbjct: 187 AKASGAYPVIVSEPSDFRRELAKKVGADYVIN 218
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
G EF V ++ +A PK I E A +P + T G + A K G T+ ++ G G
Sbjct: 118 GVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
VG + + A H GA + A S + E GA +I+Y K DI E+ +L
Sbjct: 177 PVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINY---KNGDIVEQ--ILKA 230
Query: 219 TIGDCKNSFVVA 230
T G + V+A
Sbjct: 231 TDGKGVDKVVIA 242
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 56 DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLI 115
+FP +PG D AG V + + +F+ G EV G LAE V+ +
Sbjct: 77 NFPMIPGIDFAGTV--RTSEDPRFHAGQEVLLTGWGVGE----NHWGGLAEQARVKGDWL 130
Query: 116 AKKPKNISFEEAASLPLAVQTA---IEGFKTAGFK-TGQTIFIVGGAGGVGTLVIQLAKH 171
P+ + +A + A TA + + AG + I + G +GGVG+ + L H
Sbjct: 131 VAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALL-H 189
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK--FDVLYDTIGDCKNSFVV 229
G V + E++K LGA +V+ + EK + DT+GD + V+
Sbjct: 190 KLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVL 249
Query: 230 AKDN 233
A+ N
Sbjct: 250 AQMN 253
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 112 ESLIAKKPKNISFEEA-ASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLA 169
E L+ + P I A ++ + TA G + G K G+T+ + AG VG++V Q+A
Sbjct: 123 EKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIA 182
Query: 170 KHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK--------FDVLYDTIG 221
K G V A S KV ++++LG D V +Y+ E +EE +D +D +G
Sbjct: 183 K-LKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTV--ESLEETLKKASPDGYDCYFDNVG 239
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 112 ESLIAKKPKNISFEEA-ASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLA 169
E L+ + P I A ++ + TA G + G K G+T+ + AG VG++V Q+A
Sbjct: 102 EKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIA 161
Query: 170 KHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK--------FDVLYDTIG 221
K G V A S KV ++++LG D V +Y+ E +EE +D +D +G
Sbjct: 162 K-LKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTV--ESLEETLKKASPDGYDCYFDNVG 218
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 39/201 (19%)
Query: 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200
+ G K G+T+ + AG VG++V Q+AK G V A S K+ ++K++G D +
Sbjct: 138 LEVCGVKGGETVLVSAAAGAVGSVVGQIAK-LKGCKVVGAAGSDEKIAYLKQIGFDAAFN 196
Query: 201 YRKTKYEDIEEK--------FDVLYDTIGDCKNSFVVA--KDNAPI-----------VDI 239
Y+ +EE +D +D +G + V++ KD I +D
Sbjct: 197 YKTV--NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQ 254
Query: 240 TWP-PSHPRAIYSSLTVSGEI------------LEKLRPFIESGKLKAQIDPTGPYKFKD 286
P PS IY L + G I L L ++ GK++ T F++
Sbjct: 255 LPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVT--KGFEN 312
Query: 287 VIEAFRYLETGRARGKVVISA 307
+ AF + G GK V++A
Sbjct: 313 MPAAFIEMLNGANLGKAVVTA 333
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 23 LPTPQHDQLLVQVRAAALNPIDSK--RRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80
+PTP ++ V+V+ A + DS R P + +P V G + G++ A G V
Sbjct: 39 IPTPSAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVESAR 96
Query: 81 TGDEVY------------GNIQDFNAEGKLKQLG-----ALAEFIVVEESLIAKKPKNIS 123
G+ V +I N L LG +E+ VV K P+ ++
Sbjct: 97 VGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVA 156
Query: 124 FEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV-VAT 181
+ A + P + + G G T +V GAG +G ++Q+ K Y +V VA
Sbjct: 157 DQYAVMIEPFTIAANVTGH---GQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVAD 213
Query: 182 TSTPKVEFVKELGADKVIDYRKT 204
++E KE GAD I+ +T
Sbjct: 214 RIDERLEKAKESGADWAINNSQT 236
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
G E+ V ++ +A PK++ E A + + T G + A + G ++ ++ G G
Sbjct: 118 GVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
VG + I AK GA ++ S P VE K GA +++Y+ ED V+
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIED-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG 270
T G + ++A + + P I S++ G L P +E G
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWG 282
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 88/236 (37%), Gaps = 29/236 (12%)
Query: 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--FPSDFPA 59
A Y E G + V+ D P PTP ++L++V AA L D P + P
Sbjct: 1 MKAVQYTEIGSEPVVV--DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPL 58
Query: 60 VPGCDMAGIVVAKGTSVTKFNTGD--EVYG----NIQDFNAEGK---------------- 97
G + G V G VT F GD VYG A G+
Sbjct: 59 TLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG 118
Query: 98 LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA--GFKTGQTIFIV 155
L G++AE+++V+ + ++ AA L A T G T ++
Sbjct: 119 LGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVI 178
Query: 156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE 211
G GG+G + IQ+ + A + ++ +E+GAD + + I E
Sbjct: 179 -GVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRE 233
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIA 116
FP +PG D AG V A + +F+ G EV G LAE V+ +
Sbjct: 57 FPXIPGIDFAGTVHA--SEDPRFHAGQEVLLTGWGVGE----NHWGGLAERARVKGDWLV 110
Query: 117 KKPKNISFEEAASLPLAVQTA---IEGFKTAGFK-TGQTIFIVGGAGGVG-TLVIQLAKH 171
P +S A + A TA + + AG + + + G +GGVG T V L K
Sbjct: 111 ALPAGLSSRNAXIIGTAGFTAXLCVXALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKL 170
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK--FDVLYDTIGDCKNSFVV 229
Y + V ST ++K LGA++++ + EK + DT+GD + V+
Sbjct: 171 GYQVAAVSGRESTHG--YLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVL 228
Query: 230 AKDN 233
A+ N
Sbjct: 229 AQXN 232
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 81/204 (39%), Gaps = 40/204 (19%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
G +E V E+ +A P++I E+A L V T G + A K G T+ ++ G G
Sbjct: 118 GVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
VG + + A H GA + A S + E GA +I+Y K DI E+ +L
Sbjct: 177 PVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINY---KNGDIVEQ--ILKA 230
Query: 219 TIGDCKNSFVVA----------------------------KDNAPIVDITWPPSHP-RAI 249
T G + V+A DN I W + I
Sbjct: 231 TDGKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHI 290
Query: 250 YSSLTVSGEI-LEKLRPFIESGKL 272
+ LT G + +EKL I +GKL
Sbjct: 291 HGGLTPGGRVRMEKLASLISTGKL 314
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 29/212 (13%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL--------FPSDFPAVPGCDMAG 67
L L + +P P+ Q+L++V AA + D RQ P G ++AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL-------------------GALAEFI 108
+ G V ++ GD V + + EG GA AE++
Sbjct: 73 KIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYV 130
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQL 168
+V K + ++ EAA L + T + A +T+ +VG GG+GT +Q+
Sbjct: 131 IVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQI 190
Query: 169 AKHFYGASHVVATTSTPKVEFVKELGADKVID 200
AK GA+ + VE K GAD VI+
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVIN 222
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
G E+ V ++ +A PK++ E A + + T G + A + G ++ ++ G G
Sbjct: 118 GVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
VG + I AK GA ++ S P VE K GA +++Y+ D V+
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVD-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG 270
T G + ++A + + P I S++ G L P +E G
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWG 282
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 31/209 (14%)
Query: 15 VLKLGDFPLPTPQH-DQLLVQVRAAALNPIDSKRRQRPLFPSD---FPAVPGCDMAGIVV 70
++++ + +P +H D++ V++ ++ L D R +F + +P G + +G +
Sbjct: 11 IVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR----IFKNGAHYYPITLGHEFSGYID 66
Query: 71 AKGTSVTKFNTGDEV------------------YGNIQDFNAEGKLKQLGALAEFIVVEE 112
A G+ V + GD V Y ++ G + G AE+IVV+
Sbjct: 67 AVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRD-GGFAEYIVVKR 125
Query: 113 SLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH 171
+ P ++ E+ A + P+ V + F A + + I+ GAG +G L IQ A
Sbjct: 126 KNVFALPTDMPIEDGAFIEPITV--GLHAFHLAQGCENKNVIII-GAGTIGLLAIQCAVA 182
Query: 172 FYGASHVVATTSTPKVEFVKELGADKVID 200
S S+ K+ K GA + +
Sbjct: 183 LGAKSVTAIDISSEKLALAKSFGAMQTFN 211
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 102 GALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159
G E+ V ++ +A PK++ E A + + T G + A + G ++ ++ G G
Sbjct: 118 GVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVI-GIG 176
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYD 218
VG + I AK GA ++ S P VE K GA +++Y+ D V+
Sbjct: 177 AVGLMGIAGAK-LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVD-----QVMKL 230
Query: 219 TIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESG 270
T G + ++A + + P I S++ G L P +E G
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWG 282
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 38/217 (17%)
Query: 22 PLPTPQHDQLLVQVRAAALNP-----IDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSV 76
PL P Q+LV+ +L+P ++ R P P G M + V K V
Sbjct: 32 PLGEPAEGQILVKNEYLSLDPAMRGWMNDARSYIP------PVGIGEVMRALGVGK-VLV 84
Query: 77 TK---FNTGDEVYG--NIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLP 131
+K F GD V G +QD+ +G F V+ S A P+ +S +L
Sbjct: 85 SKHPGFQAGDYVNGALGVQDYF-------IGEPKGFYKVDPSR-APLPRYLS-----ALG 131
Query: 132 LAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF- 189
+ TA G K G+T+ I G AG VG++ Q+A+ G V K F
Sbjct: 132 MTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIAR-LKGCRVVGIAGGAEKCRFL 190
Query: 190 VKELGADKVIDYRKTKY-----EDIEEKFDVLYDTIG 221
V+ELG D IDY+ + + DV +D +G
Sbjct: 191 VEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG 227
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 111/299 (37%), Gaps = 65/299 (21%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEV-----------------------------YG 87
+P +PG ++AGI+ G V KF GD V Y
Sbjct: 58 YPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYD 117
Query: 88 NIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK----T 143
+ F+ +G + IVV+E+ + KN E+ A L A T K T
Sbjct: 118 CLDSFHDNE--PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVT 175
Query: 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK 203
G K G V G GG+G++ ++ A GA V + K + +G + +
Sbjct: 176 KGTKVG-----VAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMG----VKHFY 225
Query: 204 TKYEDIEEKFDVLYDTI---GDCKNSFVVAKDNAPIVDITWPPSH--------------P 246
T + +E+ D + TI D K+ + N + + PP
Sbjct: 226 TDPKQCKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGN 285
Query: 247 RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305
R +Y SL + +++ F + +ID KD+ A+ L G+A+ + VI
Sbjct: 286 RKVYGSLIGGIKETQEMVDFSIKHNIYPEIDLILG---KDIDTAYHNLTHGKAKFRYVI 341
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 58 PAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAK 117
P VPG + AG VV + GD V FN +G AE + V S I
Sbjct: 79 PFVPGIETAG-VVRSAPEGSGIKPGDRVMA----FNF------IGGYAERVAVAPSNILP 127
Query: 118 KPKNISFEEAASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS 176
P + EA +L T + G + G+T+ ++G AGG+GT IQ+AK GA
Sbjct: 128 TPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAK 186
Query: 177 HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK-----FDVLYDTIG 221
+ T EFVK +GAD V+ + + + E D++ D IG
Sbjct: 187 VIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIG 236
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 33 VQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGD--------- 83
+++ + D + + L S++P VPG ++ G VV G+ V+KF GD
Sbjct: 39 IRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVG 98
Query: 84 ------------EVYG-----NIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE 126
E Y + D G+ Q G A+ VV + + K P+ ++ E+
Sbjct: 99 CCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQ-GGFAKATVVHQKFVVKIPEGMAVEQ 157
Query: 127 AASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK 186
AA L A T G K + G GGVG + +++AK V+++++ +
Sbjct: 158 AAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKR 217
Query: 187 VEFVKELGADK-VIDYRKTKYEDIEEKFDVLYDTI 220
E +++LGAD VI + K ++ + D + DT+
Sbjct: 218 EEALQDLGADDYVIGSDQAKMSELADSLDYVIDTV 252
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK--VEFVKELGAD 196
+G +AG + QT+ + G AG G+L Q+ H G S VV T + + ELG D
Sbjct: 149 KGHISAG--SNQTMVVSGAAGACGSLAGQIG-HLLGCSRVVGICGTQEKCLFLTSELGFD 205
Query: 197 KVIDYRKTKY-EDIEEK----FDVLYDTIGDCKNSFVVAKDN 233
++Y+ E + E DV +D +G ++ V+++ N
Sbjct: 206 AAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNAVISQMN 247
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 140/354 (39%), Gaps = 83/354 (23%)
Query: 17 KLGDFPLPTPQHDQLLVQVRAAALNPID---------SKRRQRPLFPSDFPAVPGCDMAG 67
+L + +P P ++L++V A ++ D ++ R +P P + G ++AG
Sbjct: 18 ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP------PQIMGHEVAG 71
Query: 68 IVVAKGTSVTKFNTGDEVYGNIQDFNAEGK-------------------LKQLGALAEFI 108
VV G V GD Y +++ GK + G A +
Sbjct: 72 EVVEVGPGVEDLQVGD--YISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMDGVFAHYA 129
Query: 109 VVEESLIAKKPKNISFEEAA---SLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLV 165
+V K PK++ E AA L AV T + G AG T ++ GAG +G L
Sbjct: 130 IVPAKNAWKNPKDMPPEYAALQEPLGNAVDTVLAG-PIAGRST-----LITGAGPLGLLG 183
Query: 166 IQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKF----------DV 215
I +AK +V+ S + + K++GAD V++ +E+ KF +V
Sbjct: 184 IAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVN----PFEEDPVKFVMDITDGAGVEV 239
Query: 216 LYDTIGDCKNSFVVAKDNAPIVDITWPPSHPR---------AIYSSLTVSG-------EI 259
+ G K K P ++ PR I+ +L V G E
Sbjct: 240 FLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWET 299
Query: 260 LEKLRPFIESGKLKAQIDPTGPYKFKDVI---EAFRYLETGRARGKVVISAFPY 310
+ I+SGKL +DP +K+K EAF + G+ GKVV FP+
Sbjct: 300 WYTVSSLIQSGKL--NLDPIITHKYKGFDKFEEAFELMRAGKT-GKVVF--FPH 348
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 50/243 (20%)
Query: 5 WYYEEYGPKEVLKLGDFPLPTPQHD---QLLVQVRAAALNPIDSKRRQRP-----LFP-- 54
W Y E +EV P P+ + +++++V+A + D Q L+P
Sbjct: 37 WRYPEVRVEEV--------PEPRIEKPTEIIIKVKACGICGSDVHXAQTDEEGYILYPGL 88
Query: 55 SDFPAVPGCDMAGIVVAKGTSVT------KFNTGDEVYGNIQDFN------AEG------ 96
+ FP G + +G+VV G +F G+ V + AEG
Sbjct: 89 TGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCE 148
Query: 97 KLKQLG-----ALAEFIVVEESLIAKKPKNISFEEAASL--------PLAVQTAIEGFKT 143
L +LG A AE++ V+ + E L P +V +
Sbjct: 149 NLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRG 208
Query: 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK 203
G + G + I+GG G +G + + KH + +++ S + KELGAD VID K
Sbjct: 209 GGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTK 267
Query: 204 TKY 206
+
Sbjct: 268 ENF 270
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 114 LIAKKPKNISFEEAASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHF 172
L+ P ++ EAA+ +A TA G G+ + I GGVG + +AK
Sbjct: 3 LVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-M 61
Query: 173 YGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED 208
GA S K E + LG + V D R + D
Sbjct: 62 IGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFAD 97
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 85/231 (36%), Gaps = 44/231 (19%)
Query: 26 PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
P+ ++ +++ AA + D L + P + G + AGIV + G VT GD+V
Sbjct: 31 PKAHEVRIKMVAAGICRSDEHVVSGNLV-TPLPVILGHEAAGIVESVGEGVTTVKPGDKV 89
Query: 86 Y------------------------------GNIQD----FNAEGK----LKQLGALAEF 107
G +QD F GK + +++
Sbjct: 90 IPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQY 149
Query: 108 IVVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVGGAGGVGTLVI 166
VV+E+ +AK E+ + T K A G T + G GGVG V+
Sbjct: 150 TVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFG-LGGVGLSVV 208
Query: 167 QLAKHFYGASHVVATTSTPKVEFVKELGADKVI---DYRKTKYEDIEEKFD 214
K A + + K KELGA + I DY+K E ++E D
Sbjct: 209 MGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTD 259
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 116 AKKPKNISFEEAASL-PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174
K N+S+E A L PL+V A+ G + AG + G + I G AG +G + + AK
Sbjct: 148 CHKIGNMSYENGAMLEPLSV--ALAGLQRAGVRLGDPVLICG-AGPIGLITMLCAKAAGA 204
Query: 175 ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221
V+ +++F KE+ + V K + EE + ++ G
Sbjct: 205 CPLVITDIDEGRLKFAKEICPEVVT--HKVERLSAEESAKKIVESFG 249
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 99/244 (40%), Gaps = 30/244 (12%)
Query: 10 YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
Y K+ L+ D P + + +++ + D + + + +P VPG ++ G V
Sbjct: 29 YSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRV 88
Query: 70 VAKGTSVTKFNTGDEV-YGNIQDF-----NAEGKLKQ--------------------LGA 103
VA G V K+ GD V G I D E L+ LG
Sbjct: 89 VAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGG 148
Query: 104 LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTG-QTIFIVGGAGGVG 162
++ IVV E + + ++ + AA PL ++ G V G GG+G
Sbjct: 149 YSQQIVVHERYVLRI-RHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLG 207
Query: 163 TLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEK-FDVLYDTIG 221
+ I+LA H GA V TTS K E K LGAD+V++ R K FD + +T+
Sbjct: 208 HMGIKLA-HAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVA 266
Query: 222 DCKN 225
N
Sbjct: 267 APHN 270
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 104 LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVG 162
LA +++ + + P + EEAAS+P+ TA G + G+++ I G+GGVG
Sbjct: 1622 LATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVG 1681
Query: 163 TLVIQLA 169
I +A
Sbjct: 1682 QAAIAIA 1688
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 26/192 (13%)
Query: 55 SDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV---------------YGNIQDFNAEGKLK 99
S +P VPG ++ G V G+ V K N GD+V +++++ + L
Sbjct: 68 SMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILT 127
Query: 100 ----------QLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTG 149
G + +V E I + P N+ + A L A T K G
Sbjct: 128 YASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEP 187
Query: 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYR-KTKYED 208
+ G GG+G + ++ AK F V++T+ + K E +K GAD + R + + +
Sbjct: 188 GKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQA 247
Query: 209 IEEKFDVLYDTI 220
D + DT+
Sbjct: 248 AAGTLDGIIDTV 259
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 130 LPLAVQTAIEGF----KTAGF------KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVV 179
+PL+ T I G AGF K G+T+F+ +G VG LV Q AK G V
Sbjct: 125 VPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKML-GCYVVG 183
Query: 180 ATTSTPKVEFVK-ELGADKVIDYRKTK 205
+ S KV+ +K + G D+ +Y++ +
Sbjct: 184 SAGSKEKVDLLKSKFGFDEAFNYKEEQ 210
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 108/301 (35%), Gaps = 51/301 (16%)
Query: 10 YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
Y P + L + D + PQ ++ +++ AL D+ FP + G + AGIV
Sbjct: 15 YEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIV 74
Query: 70 VAKGTSVTKFNTGDEVYGNIQ------DFNAEGKLKQLG--------------------- 102
+ G VT+ GD V Q F GK G
Sbjct: 75 ESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSV 134
Query: 103 ------------ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG-FKTAGFKTG 149
+++ VV + +AK ++ L V T + + TA + G
Sbjct: 135 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPG 194
Query: 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTK 205
+ I G G VG V + AK GAS ++ + K E K+ G ++ + D+ K
Sbjct: 195 SNVAIF-GLGTVGLAVAEGAK-TAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPI 252
Query: 206 YEDIEEKFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRP 265
E I + D D +C + V + W S + + SG+ + RP
Sbjct: 253 QEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTS----VIVGVAASGQEIST-RP 307
Query: 266 F 266
F
Sbjct: 308 F 308
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 99/257 (38%), Gaps = 51/257 (19%)
Query: 12 PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVA 71
P + L L + P+ ++ +++ A+ + DS + + PS FP + G + G+V +
Sbjct: 18 PHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKE-IIPSKFPVILGHEAVGVVES 76
Query: 72 KGTSVTKFNTGDEVY------------------------------GNIQD----FNAEGK 97
G VT GD+V G + D F GK
Sbjct: 77 IGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGK 136
Query: 98 ----LKQLGALAEFIVVEESLIAK-KPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQT 151
L E+ VV + +AK PK + E+ + T TA G T
Sbjct: 137 PIYNLMGTSTFTEYTVVADIAVAKIDPK--APLESCLIGCGFATGYGAAVNTAKVTPGST 194
Query: 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK--ELGADKVI---DYRKTKY 206
+ G GGVG I K GAS ++ T K +F K ELGA + + DY K Y
Sbjct: 195 CAVF-GLGGVGFSAIVGCKA-AGASRIIG-VGTHKDKFPKAIELGATECLNPKDYDKPIY 251
Query: 207 EDIEEKFDVLYDTIGDC 223
E I EK + D +C
Sbjct: 252 EVICEKTNGGVDYAVEC 268
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 89/229 (38%), Gaps = 29/229 (12%)
Query: 102 GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQ--TIFIVGGAG 159
G A ++ V E + P+NI AA L T G G+ I +GG G
Sbjct: 133 GGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIG 192
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDT 219
+GTL+ + GA V + S+ K E ++GAD I + D EK+ +D
Sbjct: 193 SMGTLISKAM----GAETYVISRSSRKREDAMKMGADHYI--ATLEEGDWGEKYFDTFDL 246
Query: 220 IGDCKNSFV---------VAKDNAPIVDITWPPSHP---------RAIYSSLTVSGEI-- 259
I C +S K IV I+ P H +A+ S + G I
Sbjct: 247 IVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKE 306
Query: 260 LEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF 308
L +L + +K ++ T P V EAF +E G R + + +
Sbjct: 307 LNQLLKLVSEKDIKIWVE-TLPVGEAGVHEAFERMEKGDVRYRFTLVGY 354
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 126 EAASLPLAVQTAIEGF----KTAGF------KTGQTIFIVGGAGGVGTLVIQLAKHFYGA 175
+ +PL+ T + G AGF K G+T+++ +G VG LV QLAK G
Sbjct: 123 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAK-MMGC 181
Query: 176 SHVVATTSTPKVEFVK-ELGADKVIDYRK 203
V + S KV+ +K + G D +Y++
Sbjct: 182 YVVGSAGSKEKVDLLKTKFGFDDAFNYKE 210
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 120/344 (34%), Gaps = 78/344 (22%)
Query: 26 PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
P+ ++ +++ AA + D L + P + G + AGIV + G VT GD+V
Sbjct: 31 PKAHEVRIKMVAAGICRSDDHVVSGTLV-APLPVIAGHEAAGIVESIGEGVTTVRPGDKV 89
Query: 86 Y-----------------------------GNIQD----FNAEGK----LKQLGALAEFI 108
G +QD F GK +++
Sbjct: 90 IPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYT 149
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
VV+E +AK E+ + T K A G T + G GGVG VI
Sbjct: 150 VVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIM 208
Query: 168 LAKHFYGASHVVATTSTPKVEFVKELGADKVI---DYRKTKYEDIEE------------- 211
K A + + K KE+GA + + DY+K E + E
Sbjct: 209 GCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI 268
Query: 212 -KFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPS------HPRAIYSSLTVSGEILEKLR 264
+ D + + C+ ++ V+ V + PP +P + S T G I +
Sbjct: 269 GRLDTMVAALSCCQEAYGVS------VIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK 322
Query: 265 PFIESGKLKAQ-------IDP--TGPYKFKDVIEAFRYLETGRA 299
KL A +DP T F+ + E F L +G++
Sbjct: 323 SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKS 366
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 120/344 (34%), Gaps = 78/344 (22%)
Query: 26 PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
P+ ++ +++ AA + D L + P + G + AGIV + G VT GD+V
Sbjct: 31 PKAHEVRIKMVAAGICRSDDHVVSGTLV-APLPVIAGHEAAGIVESIGEGVTTVRPGDKV 89
Query: 86 Y-----------------------------GNIQD----FNAEGK----LKQLGALAEFI 108
G +QD F GK +++
Sbjct: 90 IPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYT 149
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
VV+E +AK E+ + T K A G T + G GGVG VI
Sbjct: 150 VVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIM 208
Query: 168 LAKHFYGASHVVATTSTPKVEFVKELGADKVI---DYRKTKYEDIEE------------- 211
K A + + K KE+GA + + DY+K E + E
Sbjct: 209 GCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI 268
Query: 212 -KFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPS------HPRAIYSSLTVSGEILEKLR 264
+ D + + C+ ++ V+ V + PP +P + S T G I +
Sbjct: 269 GRLDTMVAALSCCQEAYGVS------VIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK 322
Query: 265 PFIESGKLKAQ-------IDP--TGPYKFKDVIEAFRYLETGRA 299
KL A +DP T F+ + E F L +G++
Sbjct: 323 SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKS 366
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 104/308 (33%), Gaps = 66/308 (21%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E +AK E+ + T
Sbjct: 121 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 -EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK 197
K A G T + G GGVG VI K A + + K KE+GA +
Sbjct: 181 GSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 198 VI---DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
+ DY+K E + E + D + + C+ ++ V+ A D
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQ 299
Query: 241 WPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFKDVIEAF 291
+P + S T G I + KL A +DP T F+ + E F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 292 RYLETGRA 299
L +G +
Sbjct: 360 DLLRSGES 367
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 31/203 (15%)
Query: 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPG 62
AW + G L+L D P P + +++++V A LN D R
Sbjct: 2 KAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLXRL------------- 46
Query: 63 CDMAGIVVAKGTSVTKFN---TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKP 119
G +T+ + + + L G LAE + V + + P
Sbjct: 47 ----------GAYLTRLHPPFIPGXEVVGVVEGRRYAALVPQGGLAERVAVPKGALLPLP 96
Query: 120 KNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVV 179
+ +S EEAA+ P++ TA K A + G+ + + AG +GT +Q+A+ V+
Sbjct: 97 EGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAX--GLRVL 154
Query: 180 ATTSTP-KVEFVKELGADKVIDY 201
A S P K+ LGA++ Y
Sbjct: 155 AAASRPEKLALPLALGAEEAATY 177
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 49/256 (19%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTS 75
L + + + P+ ++ +++ A A+ D+ FP + G + AGIV + G
Sbjct: 19 LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEG 78
Query: 76 VTKFNTGDEVY------------------------------GNIQD----FNAEGK--LK 99
VTK GD V G + D F +GK L
Sbjct: 79 VTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILH 138
Query: 100 QLGA--LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVG 156
+G +E+ VV + +AK ++ L + T TA + G ++ V
Sbjct: 139 YMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPG-SVCAVF 197
Query: 157 GAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTKYEDIEEK 212
G GGVG VI K GAS ++ + K KE GA + I D+ K E + E
Sbjct: 198 GLGGVGLAVIMGCK-VAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEM 256
Query: 213 ----FDVLYDTIGDCK 224
D ++ IG+ K
Sbjct: 257 TDGGVDYSFECIGNVK 272
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 49/256 (19%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTS 75
L + + + P+ ++ +++ A A+ D+ FP + G + AGIV + G
Sbjct: 20 LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEG 79
Query: 76 VTKFNTGDEVY------------------------------GNIQD----FNAEGK--LK 99
VTK GD V G + D F +GK L
Sbjct: 80 VTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILH 139
Query: 100 QLGA--LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVG 156
+G +E+ VV + +AK ++ L + T TA + G ++ V
Sbjct: 140 YMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPG-SVCAVF 198
Query: 157 GAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTKYEDIEEK 212
G GGVG VI K GAS ++ + K KE GA + I D+ K E + E
Sbjct: 199 GLGGVGLAVIMGCK-VAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEM 257
Query: 213 ----FDVLYDTIGDCK 224
D ++ IG+ K
Sbjct: 258 TDGGVDYSFECIGNVK 273
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 49/256 (19%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTS 75
L + + + P+ ++ +++ A A+ D+ FP + G + AGIV + G
Sbjct: 20 LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEG 79
Query: 76 VTKFNTGDEVY------------------------------GNIQD----FNAEGK--LK 99
VTK GD V G + D F +GK L
Sbjct: 80 VTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILH 139
Query: 100 QLGA--LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVG 156
+G +E+ VV + +AK ++ L + T TA + G ++ V
Sbjct: 140 YMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPG-SVCAVF 198
Query: 157 GAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTKYEDIEEK 212
G GGVG VI K GAS ++ + K KE GA + I D+ K E + E
Sbjct: 199 GLGGVGLAVIMGCK-VAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEM 257
Query: 213 ----FDVLYDTIGDCK 224
D ++ IG+ K
Sbjct: 258 TDGGVDYSFECIGNVK 273
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 122/345 (35%), Gaps = 80/345 (23%)
Query: 26 PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
P+ ++ +++ A + D + + S FP + G + GIV + G VT GD+V
Sbjct: 31 PKTKEVRIKILATGICRTDDHVIKGTMV-SKFPVIVGHEATGIVESIGEGVTTVKPGDKV 89
Query: 86 Y-----------------GNI----------------QDFNAEGK----LKQLGALAEFI 108
GN+ F +GK E+
Sbjct: 90 IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYT 149
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
VV+ES +AK E+ + T KT K G T +V G GGVG VI
Sbjct: 150 VVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTC-VVFGLGGVGLSVIM 208
Query: 168 LAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTKYEDIEE------------ 211
K GAS ++ + K E +GA + I D K E + E
Sbjct: 209 GCKS-AGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEV 267
Query: 212 --KFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPS------HPRAIYSSLTVSGEILEKL 263
+ + D + C ++ + V + PPS P +++ T G + L
Sbjct: 268 IGHLETMIDALASCHMNYGTS------VVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGL 321
Query: 264 RPFIESGKL-------KAQIDP--TGPYKFKDVIEAFRYLETGRA 299
+ + KL K +D T FK + E F L +G++
Sbjct: 322 KSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQS 366
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 104/308 (33%), Gaps = 66/308 (21%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E +AK E+ + T
Sbjct: 121 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 -EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK 197
K A G T + G GGVG VI K A + + K KE+GA +
Sbjct: 181 GSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 198 VI---DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
+ DY+K E + E + D + + C+ ++ V+ + D
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQ 299
Query: 241 WPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFKDVIEAF 291
+P + S T G I + KL A +DP T F+ + E F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 292 RYLETGRA 299
L +G +
Sbjct: 360 DLLRSGES 367
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 103/308 (33%), Gaps = 66/308 (21%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E +AK E+ + T
Sbjct: 121 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 -EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK 197
K A G T + G GGVG VI K A + + K KE+GA +
Sbjct: 181 GSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 198 VI---DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
+ DY+K E + E + D + + C+ ++ V+ D
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQ 299
Query: 241 WPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFKDVIEAF 291
+P + S T G I + KL A +DP T F+ + E F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 292 RYLETGRA 299
L +G +
Sbjct: 360 DLLRSGES 367
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 106/314 (33%), Gaps = 78/314 (24%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E +AK E+ + T
Sbjct: 121 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 -EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK 197
K A G T + G GGVG VI K A + + K KE+GA +
Sbjct: 181 GSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 198 VI---DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
+ DY+K E + E + D + + C+ ++ V+ V +
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS------VIVG 293
Query: 241 WPPS------HPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFK 285
PP +P + S T G I + KL A +DP T F+
Sbjct: 294 VPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE 353
Query: 286 DVIEAFRYLETGRA 299
+ E F L +G +
Sbjct: 354 KINEGFDLLRSGES 367
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 106/314 (33%), Gaps = 78/314 (24%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E +AK E+ + T
Sbjct: 121 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 -EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK 197
K A G T + G GGVG VI K A + + K KE+GA +
Sbjct: 181 GSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 198 VI---DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
+ DY+K E + E + D + + C+ ++ V+ V +
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS------VIVG 293
Query: 241 WPPS------HPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFK 285
PP +P + S T G I + KL A +DP T F+
Sbjct: 294 VPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE 353
Query: 286 DVIEAFRYLETGRA 299
+ E F L +G +
Sbjct: 354 KINEGFDLLRSGES 367
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 121/345 (35%), Gaps = 80/345 (23%)
Query: 26 PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
P+ ++ +++ A + D + + S FP + G + GIV + G VT GD+V
Sbjct: 31 PKTKEVRIKILATGICRTDDHVIKGTMV-SKFPVIVGHEATGIVESIGEGVTTVKPGDKV 89
Query: 86 Y-----------------GNI---QDFNAEGKLK-----------------QLGALAEFI 108
GN+ D G L E+
Sbjct: 90 IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYT 149
Query: 109 VVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVGGAGGVGTLVIQ 167
VV+ES +AK E+ + T KT K G T +V G GGVG VI
Sbjct: 150 VVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTC-VVFGLGGVGLSVIM 208
Query: 168 LAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTKYEDIEE------------ 211
K GAS ++ + K E +GA + I D K E + E
Sbjct: 209 GCKS-AGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEV 267
Query: 212 --KFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPS------HPRAIYSSLTVSGEILEKL 263
+ + D + C ++ + V + PPS P +++ T G + L
Sbjct: 268 IGHLETMIDALASCHMNYGTS------VVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGL 321
Query: 264 RPFIESGKL-------KAQIDP--TGPYKFKDVIEAFRYLETGRA 299
+ + KL K +D T FK + E F L +G++
Sbjct: 322 KSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQS 366
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
And Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
And Inhibitor
Length = 376
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 26 PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
P+ ++ +QV A + P D P + FP V G + AGIV + G VT F GD+V
Sbjct: 31 PKACEVRIQVIATCVCPTDINATD-PKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKV 89
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 106/314 (33%), Gaps = 78/314 (24%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E +AK E+ + T
Sbjct: 121 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 -EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK 197
K A G T + G GGVG VI K A + + K KE+GA +
Sbjct: 181 GSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 198 VI---DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
+ DY+K E + E + D + + C+ ++ V+ V +
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS------VIVG 293
Query: 241 WPPS------HPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFK 285
PP +P + S T G I + KL A +DP T F+
Sbjct: 294 VPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE 353
Query: 286 DVIEAFRYLETGRA 299
+ E F L +G +
Sbjct: 354 KINEGFDLLRSGES 367
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKY 206
G+T+ ++ GAG +G + +A+ GA +V+ +P +++ +E+GAD ++ R+T
Sbjct: 195 AGKTV-VIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLNRRETSV 252
Query: 207 ED 208
E+
Sbjct: 253 EE 254
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 128/369 (34%), Gaps = 82/369 (22%)
Query: 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVP 61
+ A +EE P + + + P+ ++ +++ A + D + L + P +
Sbjct: 10 KAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLV-TPLPVIA 65
Query: 62 GCDMAGIVVAKGTSVTKFNTGDEVY------------------------------GNIQD 91
G + AGIV + G VT GD+V G +QD
Sbjct: 66 GHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQD 125
Query: 92 ----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFK 142
F GK +++ VV+E +AK E+ + T K
Sbjct: 126 GTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI--- 199
A G T + G GGVG VI K A + + + KE+GA + +
Sbjct: 186 VAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECVNPQ 244
Query: 200 DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDITWPPS- 244
DY+K E + E + D + + C+ ++ V+ V + PP
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS------VIVGVPPDS 298
Query: 245 -----HPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFKDVIEA 290
+P + S T G I + KL A +DP T F+ + E
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEG 358
Query: 291 FRYLETGRA 299
F L +G +
Sbjct: 359 FDLLRSGES 367
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 85/243 (34%), Gaps = 42/243 (17%)
Query: 13 KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAK 72
K+ + D + P+ ++ +++ A + D L + P + G + AGIV +
Sbjct: 18 KKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLV-TPLPVILGHEAAGIVESV 76
Query: 73 GTSVTKFNTGDEVY------------------------------GNIQD----FNAEGK- 97
G VT GD+V G +QD F GK
Sbjct: 77 GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 98 ---LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFI 154
+++ VV+E+ +AK E+ + T T +
Sbjct: 137 IHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCA 196
Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI---DYRKTKYEDIEE 211
V G GGVG + K A + + K KELGA + I DY+K E ++E
Sbjct: 197 VFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKE 256
Query: 212 KFD 214
D
Sbjct: 257 MTD 259
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 68/199 (34%), Gaps = 41/199 (20%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E+ +AK E+ + T
Sbjct: 121 GTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV 198
T + V G GGVG + K A + + K KELGA +
Sbjct: 181 GSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATEC 240
Query: 199 I---DYRKTKYEDIEEKFD 214
I DY+K E ++E D
Sbjct: 241 INPQDYKKPIQEVLKEMTD 259
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 85/243 (34%), Gaps = 42/243 (17%)
Query: 13 KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAK 72
K+ + D + P+ ++ +++ A + D L + P + G + AGIV +
Sbjct: 18 KKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLV-TPLPVILGHEAAGIVESV 76
Query: 73 GTSVTKFNTGDEVY------------------------------GNIQD----FNAEGK- 97
G VT GD+V G +QD F GK
Sbjct: 77 GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 98 ---LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFI 154
+++ VV+E+ +AK E+ + T T +
Sbjct: 137 IHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCA 196
Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI---DYRKTKYEDIEE 211
V G GGVG + K A + + K KELGA + I DY+K E ++E
Sbjct: 197 VFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKE 256
Query: 212 KFD 214
D
Sbjct: 257 MTD 259
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 85/243 (34%), Gaps = 42/243 (17%)
Query: 13 KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAK 72
K+ + D + P+ ++ +++ A + D L + P + G + AGIV +
Sbjct: 18 KKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLV-TPLPVILGHEAAGIVESV 76
Query: 73 GTSVTKFNTGDEVY------------------------------GNIQD----FNAEGK- 97
G VT GD+V G +QD F GK
Sbjct: 77 GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 98 ---LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFI 154
+++ VV+E+ +AK E+ + T T +
Sbjct: 137 IHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCA 196
Query: 155 VGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI---DYRKTKYEDIEE 211
V G GGVG + K A + + K KELGA + I DY+K E ++E
Sbjct: 197 VFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKE 256
Query: 212 KFD 214
D
Sbjct: 257 MTD 259
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 106/314 (33%), Gaps = 78/314 (24%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E +AK E+ + T
Sbjct: 121 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 -EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK 197
K A G T + G GGVG VI K A + + K KE+GA +
Sbjct: 181 GSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 198 VI---DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
+ DY+K E + E + D + + C+ ++ V+ V +
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS------VIVG 293
Query: 241 WPPS------HPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFK 285
PP +P + S T G I + KL A +DP T F+
Sbjct: 294 VPPDSQNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE 353
Query: 286 DVIEAFRYLETGRA 299
+ E F L +G +
Sbjct: 354 KINEGFDLLRSGES 367
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 40/93 (43%)
Query: 10 YGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIV 69
+ P + L + D + PQ ++ V+V AL D+ FP V G + AGIV
Sbjct: 33 WEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGHEAAGIV 92
Query: 70 VAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLG 102
+ G VT+ GD V Q E K + G
Sbjct: 93 ESVGEGVTEVQPGDHVIPCYQAECRECKFCKSG 125
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 97/256 (37%), Gaps = 49/256 (19%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTS 75
L + + + P+ ++ +++ A A+ D+ FP + G AGIV + G
Sbjct: 19 LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEG 78
Query: 76 VTKFNTGDEVY------------------------------GNIQD----FNAEGK--LK 99
VTK GD V G + D F +GK L
Sbjct: 79 VTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILH 138
Query: 100 QLGA--LAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVG 156
+G +E+ VV + +AK ++ L + T TA + G ++ V
Sbjct: 139 YMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPG-SVCAVF 197
Query: 157 GAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVI---DYRKTKYEDIEEK 212
G GGVG VI K GAS ++ + K KE GA + I D+ K E + E
Sbjct: 198 GLGGVGLAVIMGCK-VAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEM 256
Query: 213 ----FDVLYDTIGDCK 224
D ++ IG+ K
Sbjct: 257 TDGGVDYSFECIGNVK 272
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 69/199 (34%), Gaps = 41/199 (20%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQ 120
Query: 87 GNIQDFNAEGKLKQ--------LGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD + ++ + +++ VV+E+ +AK E+ + T
Sbjct: 121 GTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV 198
T + V G GGVG I K A + + K KELGA +
Sbjct: 181 GSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATEC 240
Query: 199 I---DYRKTKYEDIEEKFD 214
I DY+K E ++E D
Sbjct: 241 INPQDYKKPIQEVLKEMTD 259
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 105/314 (33%), Gaps = 78/314 (24%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E +AK E+ + T
Sbjct: 121 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 -EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK 197
K A G T + G GG G VI K A + + K KE+GA +
Sbjct: 181 GSAVKVAKVTQGSTCAVFG-LGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 198 VI---DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
+ DY+K E + E + D + + C+ ++ V+ V +
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS------VIVG 293
Query: 241 WPPS------HPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFK 285
PP +P + S T G I + KL A +DP T F+
Sbjct: 294 VPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE 353
Query: 286 DVIEAFRYLETGRA 299
+ E F L +G +
Sbjct: 354 KINEGFDLLRSGES 367
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 105/314 (33%), Gaps = 78/314 (24%)
Query: 57 FPAVPGCDMAGIVVAKGTSVTKFNTGDEVY------------------------------ 86
P + G + AGIV + G VT GD+V
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 87 GNIQD----FNAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138
G +QD F GK +++ VV+E +AK E+ + T
Sbjct: 121 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY 180
Query: 139 -EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK 197
K A G T + G GG G VI K A + + K KE+GA +
Sbjct: 181 GSAVKVAKVTQGSTCAVFG-LGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 198 VI---DYRKTKYEDIEE--------------KFDVLYDTIGDCKNSFVVAKDNAPIVDIT 240
+ DY+K E + E + D + + C+ ++ V+ V +
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS------VIVG 293
Query: 241 WPPS------HPRAIYSSLTVSGEILEKLRPFIESGKLKAQ-------IDP--TGPYKFK 285
PP +P + S T G I + KL A +DP T F+
Sbjct: 294 VPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE 353
Query: 286 DVIEAFRYLETGRA 299
+ E F L +G +
Sbjct: 354 KINEGFDLLRSGES 367
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 26 PQHDQLLVQVRAAA-----LNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80
P+ ++ +QV A +N D K++ FP V G + AGIV + G VT F
Sbjct: 31 PKACEVRIQVIATCVCHTDINATDPKKKAL------FPVVLGHECAGIVESVGPGVTNFK 84
Query: 81 TGDEV 85
GD+V
Sbjct: 85 PGDKV 89
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
Length = 381
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 26 PQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85
P+ ++ +Q+ A +L D+ FP + G + AGIV + G VT GD+V
Sbjct: 33 PKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKV 92
>pdb|2YY7|A Chain A, Crystal Structure Of Thermolabile L-Threonine
Dehydrogenase From Flavobacterium Frigidimaris Kuc-1
pdb|2YY7|B Chain B, Crystal Structure Of Thermolabile L-Threonine
Dehydrogenase From Flavobacterium Frigidimaris Kuc-1
Length = 312
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181
I I+G G +GT + Q + YG +V+A+
Sbjct: 5 ILIIGACGQIGTELTQKLRKLYGTENVIAS 34
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 83/225 (36%), Gaps = 42/225 (18%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTS 75
L + + + P +++ +++ A + D FP V G + AGIV + G
Sbjct: 21 LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPG 80
Query: 76 VTKFNTGDEV-------------------------YGNIQ---------DFNAEGK--LK 99
VT+F G++V + N F +G+ L+
Sbjct: 81 VTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQ 140
Query: 100 QLG--ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI-EGFKTAGFKTGQTIFIVG 156
LG +++ VV + +AK + + L V T TA + G T +
Sbjct: 141 FLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVF- 199
Query: 157 GAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVID 200
G G VG L + H GA ++A P K E K GA ++
Sbjct: 200 GLGAVG-LAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVN 243
>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
(Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
Length = 349
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 40/209 (19%)
Query: 16 LKLGDFPLPTPQHDQLLVQVRAAALNPID----------SKRRQRPLFPSDFPAVPGCDM 65
L+ G +P P Q+L++V A++NP D + + RP G +
Sbjct: 37 LEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPA---------GFEG 87
Query: 66 AGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGK-------LKQLGALAEFIVVEESLIAKK 118
G +VA GDE Y + GK L G+ AE+ V E +
Sbjct: 88 VGTIVA---------GGDEPYAK----SLVGKRVAFATGLSNWGSWAEYAVAEAAACIPL 134
Query: 119 PKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV 178
+ E+ A+ + TAI F + + GA + L+I LAK G +
Sbjct: 135 LDTVRDEDGAAXIVNPLTAIAXFDIVKQEGEKAFVXTAGASQLCKLIIGLAKE-EGFRPI 193
Query: 179 VATTSTPKVEFVKELGADKVIDYRKTKYE 207
V ++ +K++GA V++ + +E
Sbjct: 194 VTVRRDEQIALLKDIGAAHVLNEKAPDFE 222
>pdb|1NBE|B Chain B, Aspartate Transcarbamoylase Regulatory Chain Mutant (T82a)
pdb|1NBE|D Chain D, Aspartate Transcarbamoylase Regulatory Chain Mutant (T82a)
Length = 153
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 9 EYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKR---RQRPLFPSDFPAVPGC 63
E G K+++K+ + L Q DQL + AA+N ID+ + RP P V C
Sbjct: 52 EMGRKDLIKIENTFLSEDQVDQLALYAPQAAVNRIDNYEVVGKSRPSLPERIDNVLVC 109
>pdb|1G6Q|1 Chain 1, Crystal Structure Of Yeast Arginine Methyltransferase,
Hmt1
pdb|1G6Q|2 Chain 2, Crystal Structure Of Yeast Arginine Methyltransferase,
Hmt1
pdb|1G6Q|3 Chain 3, Crystal Structure Of Yeast Arginine Methyltransferase,
Hmt1
pdb|1G6Q|4 Chain 4, Crystal Structure Of Yeast Arginine Methyltransferase,
Hmt1
pdb|1G6Q|5 Chain 5, Crystal Structure Of Yeast Arginine Methyltransferase,
Hmt1
pdb|1G6Q|6 Chain 6, Crystal Structure Of Yeast Arginine Methyltransferase,
Hmt1
Length = 328
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL----GADKVIDYRKTKYEDIEEKF 213
G G L + AKH GA HV+ + +E KEL G I + K ED+ F
Sbjct: 48 GTGILSMFAAKH--GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPF 103
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,103,665
Number of Sequences: 62578
Number of extensions: 429055
Number of successful extensions: 1434
Number of sequences better than 100.0: 138
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 1230
Number of HSP's gapped (non-prelim): 193
length of query: 327
length of database: 14,973,337
effective HSP length: 99
effective length of query: 228
effective length of database: 8,778,115
effective search space: 2001410220
effective search space used: 2001410220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)