Query 020320
Match_columns 327
No_of_seqs 117 out of 1471
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 08:48:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020320.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020320hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 3.3E-55 7.1E-60 381.0 28.7 302 1-308 3-338 (339)
2 KOG0024 Sorbitol dehydrogenase 100.0 3.7E-49 8E-54 333.0 25.4 302 1-308 4-353 (354)
3 COG0604 Qor NADPH:quinone redu 100.0 1.4E-46 3.1E-51 334.5 31.9 296 2-307 1-326 (326)
4 KOG0023 Alcohol dehydrogenase, 100.0 1E-46 2.2E-51 317.4 26.9 304 1-309 9-356 (360)
5 COG1062 AdhC Zn-dependent alco 100.0 2.5E-47 5.5E-52 324.7 23.4 300 1-306 2-365 (366)
6 cd08239 THR_DH_like L-threonin 100.0 3.3E-43 7.2E-48 317.9 31.9 300 2-307 1-339 (339)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 3.6E-43 7.8E-48 321.1 31.5 300 2-304 1-370 (371)
8 KOG0022 Alcohol dehydrogenase, 100.0 1E-43 2.2E-48 297.9 23.6 302 1-306 7-374 (375)
9 PRK09880 L-idonate 5-dehydroge 100.0 1.4E-42 3.1E-47 314.0 30.5 297 1-307 4-343 (343)
10 KOG1197 Predicted quinone oxid 100.0 1.5E-42 3.2E-47 282.5 27.2 298 2-312 9-335 (336)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 3.1E-42 6.8E-47 313.6 31.2 300 1-306 1-357 (358)
12 TIGR02818 adh_III_F_hyde S-(hy 100.0 5.8E-42 1.3E-46 312.7 30.6 302 1-307 1-368 (368)
13 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.4E-41 3.1E-46 305.4 31.5 293 4-305 1-328 (329)
14 PLN02586 probable cinnamyl alc 100.0 1.4E-41 3.1E-46 308.9 31.6 301 2-307 11-353 (360)
15 PLN02740 Alcohol dehydrogenase 100.0 2E-41 4.3E-46 310.5 32.2 302 1-307 10-381 (381)
16 cd08300 alcohol_DH_class_III c 100.0 6.2E-41 1.3E-45 306.1 31.6 301 1-306 2-368 (368)
17 PLN02178 cinnamyl-alcohol dehy 100.0 5.8E-41 1.3E-45 305.9 31.4 300 3-307 6-348 (375)
18 cd08301 alcohol_DH_plants Plan 100.0 8.2E-41 1.8E-45 305.5 32.0 300 1-305 2-368 (369)
19 TIGR02819 fdhA_non_GSH formald 100.0 6.7E-41 1.5E-45 307.0 30.9 299 2-307 3-390 (393)
20 PLN02827 Alcohol dehydrogenase 100.0 2.4E-40 5.2E-45 302.7 31.5 300 1-308 12-377 (378)
21 TIGR01202 bchC 2-desacetyl-2-h 100.0 2.2E-40 4.9E-45 295.0 28.6 287 1-306 1-308 (308)
22 PLN02514 cinnamyl-alcohol dehy 100.0 1.2E-39 2.6E-44 296.2 32.3 300 2-308 10-351 (357)
23 PRK10309 galactitol-1-phosphat 100.0 1.6E-39 3.6E-44 294.6 32.2 300 2-308 1-347 (347)
24 cd08291 ETR_like_1 2-enoyl thi 100.0 1.9E-39 4.1E-44 291.5 31.3 290 2-305 1-323 (324)
25 TIGR03201 dearomat_had 6-hydro 100.0 1.6E-39 3.4E-44 294.8 29.8 297 5-307 2-349 (349)
26 cd08277 liver_alcohol_DH_like 100.0 3.4E-39 7.3E-44 294.3 31.5 299 1-305 2-364 (365)
27 cd08237 ribitol-5-phosphate_DH 100.0 5.1E-39 1.1E-43 290.3 28.4 291 3-307 4-339 (341)
28 COG1063 Tdh Threonine dehydrog 100.0 7.4E-39 1.6E-43 288.7 29.1 300 2-307 1-350 (350)
29 cd08233 butanediol_DH_like (2R 100.0 1.4E-38 3.1E-43 289.0 30.6 298 2-305 1-350 (351)
30 cd08230 glucose_DH Glucose deh 100.0 1.3E-38 2.7E-43 289.6 29.8 296 2-307 1-355 (355)
31 cd08292 ETR_like_2 2-enoyl thi 100.0 4.2E-38 9.2E-43 282.7 32.1 291 2-305 1-323 (324)
32 cd08238 sorbose_phosphate_red 100.0 5.1E-38 1.1E-42 290.4 32.1 303 1-308 2-369 (410)
33 KOG0025 Zn2+-binding dehydroge 100.0 2.5E-38 5.4E-43 262.3 25.5 294 2-307 20-352 (354)
34 cd08296 CAD_like Cinnamyl alco 100.0 1.3E-37 2.8E-42 280.7 32.1 298 2-306 1-333 (333)
35 PRK10754 quinone oxidoreductas 100.0 2.2E-37 4.8E-42 278.5 32.5 296 1-306 1-326 (327)
36 cd08231 MDR_TM0436_like Hypoth 100.0 1.2E-37 2.6E-42 284.0 31.0 300 3-307 2-361 (361)
37 PLN03154 putative allyl alcoho 100.0 8.1E-37 1.7E-41 276.5 33.1 291 2-308 9-346 (348)
38 PRK10083 putative oxidoreducta 100.0 5.1E-37 1.1E-41 277.5 31.4 301 2-308 1-338 (339)
39 cd08285 NADP_ADH NADP(H)-depen 100.0 1.1E-36 2.3E-41 276.6 32.2 301 2-307 1-351 (351)
40 cd08293 PTGR2 Prostaglandin re 100.0 9E-37 2E-41 276.5 31.5 279 14-307 21-345 (345)
41 cd08295 double_bond_reductase_ 100.0 1.3E-36 2.9E-41 274.6 31.9 289 2-307 8-338 (338)
42 cd08294 leukotriene_B4_DH_like 100.0 1.1E-36 2.5E-41 274.0 31.2 285 1-307 2-329 (329)
43 cd05284 arabinose_DH_like D-ar 100.0 4.3E-36 9.3E-41 271.5 32.3 298 2-307 1-340 (340)
44 cd08274 MDR9 Medium chain dehy 100.0 8E-36 1.7E-40 270.8 32.4 302 2-307 1-350 (350)
45 TIGR02825 B4_12hDH leukotriene 100.0 5.9E-36 1.3E-40 269.0 30.9 273 12-306 15-325 (325)
46 cd08283 FDH_like_1 Glutathione 100.0 6.1E-36 1.3E-40 274.7 31.0 300 2-306 1-385 (386)
47 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.1E-35 2.3E-40 268.5 32.0 294 3-306 1-334 (336)
48 PRK13771 putative alcohol dehy 100.0 1.4E-35 3.1E-40 267.4 31.1 298 2-307 1-333 (334)
49 cd08246 crotonyl_coA_red croto 100.0 1.6E-35 3.5E-40 272.9 31.7 302 1-305 12-391 (393)
50 cd05283 CAD1 Cinnamyl alcohol 100.0 2.1E-35 4.5E-40 266.7 31.3 297 3-306 1-337 (337)
51 cd08244 MDR_enoyl_red Possible 100.0 6.4E-35 1.4E-39 261.9 33.8 295 2-307 1-324 (324)
52 cd08250 Mgc45594_like Mgc45594 100.0 4.2E-35 9.1E-40 263.9 32.6 292 1-306 1-329 (329)
53 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2.3E-35 4.9E-40 269.5 31.1 300 2-306 1-367 (367)
54 cd05278 FDH_like Formaldehyde 100.0 1.4E-35 3.1E-40 268.8 29.6 300 2-306 1-346 (347)
55 cd08297 CAD3 Cinnamyl alcohol 100.0 4.7E-35 1E-39 264.9 32.9 301 2-307 1-341 (341)
56 PTZ00354 alcohol dehydrogenase 100.0 6.7E-35 1.4E-39 262.9 33.7 295 1-308 1-329 (334)
57 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.5E-35 5.4E-40 267.1 31.0 301 2-306 1-344 (345)
58 cd08270 MDR4 Medium chain dehy 100.0 6.5E-35 1.4E-39 259.8 33.1 285 2-307 1-305 (305)
59 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2E-35 4.3E-40 268.2 29.3 298 2-305 1-350 (350)
60 cd08278 benzyl_alcohol_DH Benz 100.0 3.7E-35 8E-40 267.7 31.1 298 1-305 2-364 (365)
61 cd08240 6_hydroxyhexanoate_dh_ 100.0 4.7E-35 1E-39 265.8 31.5 299 2-306 1-349 (350)
62 cd08299 alcohol_DH_class_I_II_ 100.0 6.5E-35 1.4E-39 266.6 32.3 300 1-306 7-372 (373)
63 cd08262 Zn_ADH8 Alcohol dehydr 100.0 4.4E-35 9.5E-40 265.1 30.6 298 2-306 1-341 (341)
64 TIGR01751 crot-CoA-red crotony 100.0 4.7E-35 1E-39 270.0 31.3 306 1-309 7-389 (398)
65 cd08290 ETR 2-enoyl thioester 100.0 2.2E-35 4.8E-40 267.0 28.4 294 2-307 1-341 (341)
66 cd08286 FDH_like_ADH2 formalde 100.0 5.8E-35 1.2E-39 264.7 31.1 301 2-307 1-345 (345)
67 cd08259 Zn_ADH5 Alcohol dehydr 100.0 9.7E-35 2.1E-39 261.6 31.8 298 2-306 1-332 (332)
68 cd08249 enoyl_reductase_like e 100.0 7E-35 1.5E-39 263.5 30.4 298 2-307 1-339 (339)
69 PRK09422 ethanol-active dehydr 100.0 1.8E-34 4E-39 260.7 33.1 299 2-307 1-336 (338)
70 cd08235 iditol_2_DH_like L-idi 100.0 1.2E-34 2.5E-39 262.5 31.4 297 2-305 1-342 (343)
71 cd08279 Zn_ADH_class_III Class 100.0 6.8E-35 1.5E-39 265.9 29.6 298 2-304 1-362 (363)
72 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2.2E-34 4.7E-39 260.1 31.9 299 2-307 1-337 (337)
73 cd08284 FDH_like_2 Glutathione 100.0 1.5E-34 3.2E-39 261.9 30.6 297 2-306 1-343 (344)
74 cd05279 Zn_ADH1 Liver alcohol 100.0 2.1E-34 4.6E-39 262.7 31.1 298 2-305 1-364 (365)
75 cd08298 CAD2 Cinnamyl alcohol 100.0 3.9E-34 8.5E-39 257.6 30.6 295 2-305 1-329 (329)
76 cd08282 PFDH_like Pseudomonas 100.0 1.9E-34 4.1E-39 264.0 28.3 297 2-306 1-374 (375)
77 KOG1198 Zinc-binding oxidoredu 100.0 5.4E-34 1.2E-38 254.0 29.9 292 4-308 7-346 (347)
78 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 8.4E-34 1.8E-38 254.8 31.3 296 2-307 1-325 (325)
79 cd08234 threonine_DH_like L-th 100.0 1E-33 2.2E-38 255.4 31.8 296 2-305 1-333 (334)
80 cd08243 quinone_oxidoreductase 100.0 7.9E-34 1.7E-38 254.2 30.6 294 2-305 1-319 (320)
81 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.6E-33 3.4E-38 254.4 32.8 300 2-307 1-338 (338)
82 cd08242 MDR_like Medium chain 100.0 3.7E-34 8E-39 256.7 28.1 290 2-307 1-319 (319)
83 cd08287 FDH_like_ADH3 formalde 100.0 6.3E-34 1.4E-38 257.9 29.9 298 2-306 1-344 (345)
84 cd08248 RTN4I1 Human Reticulon 100.0 1.1E-33 2.3E-38 256.9 31.2 293 2-305 1-349 (350)
85 cd08236 sugar_DH NAD(P)-depend 100.0 9.9E-34 2.1E-38 256.4 30.7 297 2-305 1-343 (343)
86 cd08252 AL_MDR Arginate lyase 100.0 3.4E-33 7.5E-38 252.1 33.1 296 2-306 1-336 (336)
87 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.5E-33 3.3E-38 253.3 30.0 291 2-303 1-324 (325)
88 cd05282 ETR_like 2-enoyl thioe 100.0 2.4E-33 5.1E-38 251.7 31.1 288 6-306 2-323 (323)
89 TIGR02823 oxido_YhdH putative 100.0 2.8E-33 6.1E-38 251.3 29.7 294 3-306 1-322 (323)
90 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.2E-32 2.6E-37 248.6 33.4 303 2-307 1-342 (342)
91 cd08289 MDR_yhfp_like Yhfp put 100.0 3.2E-33 7E-38 251.2 29.1 298 2-307 1-326 (326)
92 cd08276 MDR7 Medium chain dehy 100.0 1.7E-32 3.7E-37 247.3 33.9 301 2-306 1-335 (336)
93 cd08232 idonate-5-DH L-idonate 100.0 8.6E-33 1.9E-37 249.9 31.8 296 6-307 2-339 (339)
94 cd08272 MDR6 Medium chain dehy 100.0 2E-32 4.3E-37 245.5 33.8 297 2-307 1-326 (326)
95 cd05289 MDR_like_2 alcohol deh 100.0 1.7E-32 3.7E-37 244.1 32.3 293 2-305 1-309 (309)
96 cd08245 CAD Cinnamyl alcohol d 100.0 1.9E-32 4.1E-37 246.8 31.4 296 3-305 1-330 (330)
97 COG2130 Putative NADP-dependen 100.0 7.5E-33 1.6E-37 232.0 26.5 279 14-309 25-340 (340)
98 PRK05396 tdh L-threonine 3-deh 100.0 1.5E-32 3.2E-37 248.6 30.5 298 2-307 1-340 (341)
99 cd08288 MDR_yhdh Yhdh putative 100.0 3.5E-32 7.6E-37 244.3 32.4 296 2-307 1-324 (324)
100 cd05285 sorbitol_DH Sorbitol d 100.0 2E-32 4.2E-37 247.9 30.7 294 5-305 2-341 (343)
101 cd08273 MDR8 Medium chain dehy 100.0 3.1E-32 6.7E-37 245.3 31.2 288 3-305 2-330 (331)
102 cd05276 p53_inducible_oxidored 100.0 5.1E-32 1.1E-36 242.2 31.2 291 2-305 1-323 (323)
103 cd05281 TDH Threonine dehydrog 100.0 3.5E-32 7.5E-37 246.1 29.8 299 2-307 1-341 (341)
104 PLN02702 L-idonate 5-dehydroge 100.0 6.2E-32 1.4E-36 246.5 31.7 298 2-306 18-363 (364)
105 cd08253 zeta_crystallin Zeta-c 100.0 1.2E-31 2.6E-36 240.2 32.3 298 2-307 1-325 (325)
106 cd08247 AST1_like AST1 is a cy 100.0 8.1E-32 1.7E-36 244.8 31.5 297 3-306 2-351 (352)
107 cd08271 MDR5 Medium chain dehy 100.0 2.3E-31 4.9E-36 238.8 33.7 294 2-306 1-324 (325)
108 cd05286 QOR2 Quinone oxidoredu 100.0 1.7E-31 3.7E-36 238.5 32.7 291 3-307 1-320 (320)
109 cd08265 Zn_ADH3 Alcohol dehydr 100.0 5.4E-32 1.2E-36 248.5 30.0 286 16-305 39-383 (384)
110 cd08269 Zn_ADH9 Alcohol dehydr 100.0 8E-32 1.7E-36 240.6 29.8 276 15-305 6-311 (312)
111 cd08267 MDR1 Medium chain dehy 100.0 4.1E-31 8.9E-36 236.5 29.7 289 6-305 2-319 (319)
112 TIGR02824 quinone_pig3 putativ 100.0 1.2E-30 2.5E-35 233.9 32.4 292 2-306 1-324 (325)
113 TIGR00692 tdh L-threonine 3-de 100.0 6E-31 1.3E-35 237.9 29.4 292 9-307 6-340 (340)
114 cd05288 PGDH Prostaglandin deh 100.0 9.4E-31 2E-35 235.5 30.5 287 1-305 1-329 (329)
115 cd08268 MDR2 Medium chain dehy 100.0 3.4E-30 7.4E-35 231.2 32.5 297 2-306 1-327 (328)
116 cd08251 polyketide_synthase po 100.0 1.3E-30 2.9E-35 231.4 28.0 272 23-305 2-303 (303)
117 cd08275 MDR3 Medium chain dehy 100.0 1.7E-29 3.8E-34 227.7 33.0 292 3-307 1-337 (337)
118 cd08258 Zn_ADH4 Alcohol dehydr 100.0 9.8E-30 2.1E-34 226.6 28.8 237 2-243 1-267 (306)
119 cd08241 QOR1 Quinone oxidoredu 100.0 3.4E-29 7.4E-34 224.1 32.2 291 2-306 1-323 (323)
120 TIGR03366 HpnZ_proposed putati 100.0 7.4E-30 1.6E-34 224.5 20.1 226 60-287 1-280 (280)
121 cd05195 enoyl_red enoyl reduct 100.0 2.4E-28 5.2E-33 215.2 26.2 261 29-305 1-293 (293)
122 smart00829 PKS_ER Enoylreducta 100.0 1.6E-27 3.5E-32 209.7 25.7 256 33-305 2-288 (288)
123 cd05188 MDR Medium chain reduc 100.0 2.1E-26 4.5E-31 201.1 25.2 212 30-243 1-235 (271)
124 cd08255 2-desacetyl-2-hydroxye 99.9 2.8E-25 6.1E-30 195.2 23.4 229 56-304 19-276 (277)
125 KOG1196 Predicted NAD-dependen 99.9 7.1E-24 1.5E-28 177.6 27.2 289 3-309 5-342 (343)
126 KOG1202 Animal-type fatty acid 99.9 8.5E-26 1.8E-30 215.6 16.3 279 11-312 1424-1746(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.7 8.6E-18 1.9E-22 126.2 10.1 91 28-118 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.3 1.1E-11 2.5E-16 95.9 10.0 83 160-243 1-92 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.2 1.5E-10 3.3E-15 105.5 13.0 168 137-312 188-381 (413)
130 PF13602 ADH_zinc_N_2: Zinc-bi 99.2 3E-11 6.5E-16 93.2 4.2 109 193-305 1-127 (127)
131 PRK09424 pntA NAD(P) transhydr 99.0 7E-09 1.5E-13 97.0 13.0 132 146-279 162-339 (509)
132 TIGR00561 pntA NAD(P) transhyd 98.2 1.9E-05 4.1E-10 74.1 12.1 93 147-241 162-285 (511)
133 PRK05476 S-adenosyl-L-homocyst 98.1 2.2E-05 4.8E-10 72.1 11.0 99 137-243 198-302 (425)
134 PRK08306 dipicolinate synthase 98.0 9.7E-05 2.1E-09 65.3 12.0 91 148-243 151-244 (296)
135 TIGR00936 ahcY adenosylhomocys 97.9 9.6E-05 2.1E-09 67.6 11.2 99 137-243 181-285 (406)
136 PRK11873 arsM arsenite S-adeno 97.9 0.00015 3.4E-09 63.4 11.3 159 143-305 72-259 (272)
137 PLN02494 adenosylhomocysteinas 97.8 0.00015 3.2E-09 67.1 9.8 88 147-242 252-343 (477)
138 cd05213 NAD_bind_Glutamyl_tRNA 97.6 0.00032 6.9E-09 62.6 8.6 105 113-223 139-249 (311)
139 PRK00517 prmA ribosomal protei 97.5 0.0011 2.4E-08 57.2 10.9 138 77-241 65-214 (250)
140 PTZ00075 Adenosylhomocysteinas 97.5 0.0016 3.5E-08 60.5 12.4 90 145-242 250-343 (476)
141 TIGR00518 alaDH alanine dehydr 97.4 0.0015 3.2E-08 59.7 10.0 92 148-241 166-268 (370)
142 PRK12771 putative glutamate sy 97.3 0.00051 1.1E-08 66.6 6.9 77 145-223 133-233 (564)
143 PRK00045 hemA glutamyl-tRNA re 97.2 0.00072 1.6E-08 63.0 6.3 150 59-223 90-253 (423)
144 COG3967 DltE Short-chain dehyd 97.1 0.0017 3.6E-08 53.0 6.8 73 148-221 4-87 (245)
145 PF01488 Shikimate_DH: Shikima 97.1 0.0024 5.1E-08 49.6 7.6 93 147-243 10-112 (135)
146 COG4221 Short-chain alcohol de 97.1 0.0019 4E-08 54.3 7.3 73 148-221 5-90 (246)
147 TIGR02853 spore_dpaA dipicolin 97.1 0.0031 6.8E-08 55.5 8.8 91 148-243 150-243 (287)
148 PF11017 DUF2855: Protein of u 97.0 0.14 3E-06 45.2 18.3 151 67-223 37-210 (314)
149 PF00670 AdoHcyase_NAD: S-aden 97.0 0.0063 1.4E-07 48.2 9.0 92 144-243 18-113 (162)
150 PF02826 2-Hacid_dh_C: D-isome 96.8 0.0061 1.3E-07 49.7 7.5 106 147-273 34-147 (178)
151 PRK08324 short chain dehydroge 96.7 0.0056 1.2E-07 60.8 8.2 108 103-221 386-507 (681)
152 COG0300 DltE Short-chain dehyd 96.7 0.0089 1.9E-07 51.5 8.1 75 146-221 3-93 (265)
153 TIGR01035 hemA glutamyl-tRNA r 96.6 0.041 9E-07 51.2 12.4 149 59-223 88-251 (417)
154 PF02353 CMAS: Mycolic acid cy 96.6 0.0043 9.3E-08 54.1 5.4 96 141-239 55-165 (273)
155 PRK05786 fabG 3-ketoacyl-(acyl 96.5 0.035 7.5E-07 47.2 10.7 42 148-190 4-45 (238)
156 COG2518 Pcm Protein-L-isoaspar 96.5 0.036 7.7E-07 45.8 9.9 101 137-241 61-170 (209)
157 PF13460 NAD_binding_10: NADH( 96.4 0.0062 1.3E-07 49.6 5.1 68 152-222 1-70 (183)
158 PLN03209 translocon at the inn 96.3 0.011 2.4E-07 56.5 6.8 79 143-222 74-169 (576)
159 PRK00377 cbiT cobalt-precorrin 96.3 0.052 1.1E-06 45.0 10.2 96 141-238 33-143 (198)
160 PRK05693 short chain dehydroge 96.2 0.021 4.6E-07 49.8 7.9 71 150-221 2-81 (274)
161 PRK05993 short chain dehydroge 96.2 0.024 5.2E-07 49.6 8.1 73 148-221 3-85 (277)
162 KOG1205 Predicted dehydrogenas 96.2 0.036 7.9E-07 48.2 8.9 73 148-221 11-100 (282)
163 PRK03369 murD UDP-N-acetylmura 96.1 0.034 7.3E-07 53.0 9.0 72 146-222 9-80 (488)
164 PRK06182 short chain dehydroge 96.0 0.022 4.8E-07 49.6 7.2 73 148-221 2-83 (273)
165 TIGR00406 prmA ribosomal prote 96.0 0.063 1.4E-06 47.4 10.0 111 146-274 157-278 (288)
166 PRK07060 short chain dehydroge 96.0 0.048 1E-06 46.5 8.9 73 148-221 8-86 (245)
167 PRK14967 putative methyltransf 96.0 0.31 6.8E-06 41.2 13.6 128 141-286 29-191 (223)
168 PRK06139 short chain dehydroge 95.9 0.038 8.3E-07 49.8 8.3 73 148-221 6-93 (330)
169 PRK12367 short chain dehydroge 95.9 0.052 1.1E-06 46.7 8.8 72 148-221 13-88 (245)
170 COG2230 Cfa Cyclopropane fatty 95.9 0.084 1.8E-06 45.9 9.7 99 142-243 66-179 (283)
171 CHL00194 ycf39 Ycf39; Provisio 95.8 0.031 6.8E-07 50.0 7.3 70 151-221 2-73 (317)
172 PRK06057 short chain dehydroge 95.8 0.06 1.3E-06 46.3 8.8 73 148-221 6-88 (255)
173 PF12847 Methyltransf_18: Meth 95.8 0.038 8.3E-07 40.9 6.6 89 148-238 1-109 (112)
174 PRK11705 cyclopropane fatty ac 95.8 0.058 1.3E-06 49.6 9.0 102 136-240 154-267 (383)
175 PRK13943 protein-L-isoaspartat 95.8 0.095 2.1E-06 46.9 10.0 96 140-239 72-179 (322)
176 COG2242 CobL Precorrin-6B meth 95.8 0.15 3.2E-06 41.4 10.0 116 141-272 27-153 (187)
177 cd01078 NAD_bind_H4MPT_DH NADP 95.7 0.07 1.5E-06 44.1 8.4 73 148-221 27-106 (194)
178 PRK05872 short chain dehydroge 95.7 0.037 8E-07 49.0 7.1 73 148-221 8-94 (296)
179 PRK08177 short chain dehydroge 95.6 0.093 2E-06 44.2 9.0 71 150-221 2-80 (225)
180 PRK06200 2,3-dihydroxy-2,3-dih 95.6 0.09 2E-06 45.5 9.0 73 148-221 5-89 (263)
181 PRK06949 short chain dehydroge 95.5 0.072 1.6E-06 45.8 8.3 43 147-190 7-49 (258)
182 PRK07825 short chain dehydroge 95.5 0.092 2E-06 45.7 9.0 72 149-221 5-87 (273)
183 PRK13940 glutamyl-tRNA reducta 95.5 0.31 6.7E-06 45.3 12.7 78 145-226 177-256 (414)
184 PRK07831 short chain dehydroge 95.5 0.079 1.7E-06 45.8 8.5 75 146-221 14-106 (262)
185 TIGR02469 CbiT precorrin-6Y C5 95.5 0.22 4.7E-06 37.3 9.9 96 142-239 13-121 (124)
186 TIGR03325 BphB_TodD cis-2,3-di 95.5 0.063 1.4E-06 46.4 7.7 73 148-221 4-88 (262)
187 PRK12742 oxidoreductase; Provi 95.5 0.099 2.1E-06 44.3 8.8 73 148-221 5-84 (237)
188 COG0686 Ald Alanine dehydrogen 95.4 0.047 1E-06 47.6 6.5 91 147-240 167-268 (371)
189 PRK04148 hypothetical protein; 95.4 0.1 2.2E-06 40.0 7.6 75 144-221 12-86 (134)
190 PRK06196 oxidoreductase; Provi 95.4 0.1 2.2E-06 46.6 8.9 73 148-221 25-108 (315)
191 PRK06505 enoyl-(acyl carrier p 95.3 0.12 2.5E-06 45.2 8.9 73 148-221 6-94 (271)
192 PRK07814 short chain dehydroge 95.3 0.12 2.7E-06 44.6 9.0 41 148-189 9-49 (263)
193 PRK05866 short chain dehydroge 95.3 0.13 2.8E-06 45.5 9.0 73 148-221 39-126 (293)
194 cd01080 NAD_bind_m-THF_DH_Cycl 95.3 0.26 5.6E-06 39.7 9.9 94 129-243 23-119 (168)
195 PRK07533 enoyl-(acyl carrier p 95.2 0.15 3.2E-06 44.1 9.2 73 148-221 9-97 (258)
196 PRK14175 bifunctional 5,10-met 95.2 0.28 6.1E-06 42.9 10.6 95 129-243 137-233 (286)
197 PF02882 THF_DHG_CYH_C: Tetrah 95.1 0.36 7.8E-06 38.4 10.3 96 128-243 14-111 (160)
198 cd01065 NAD_bind_Shikimate_DH 95.1 0.14 3E-06 40.4 8.1 81 140-222 9-91 (155)
199 PRK06841 short chain dehydroge 95.1 0.1 2.2E-06 44.8 7.8 73 148-221 14-98 (255)
200 PRK05867 short chain dehydroge 94.9 0.16 3.5E-06 43.6 8.6 42 148-190 8-49 (253)
201 PRK06180 short chain dehydroge 94.9 0.11 2.3E-06 45.5 7.6 74 148-222 3-88 (277)
202 PRK08217 fabG 3-ketoacyl-(acyl 94.9 0.18 3.8E-06 43.1 8.8 41 148-189 4-44 (253)
203 PRK07109 short chain dehydroge 94.9 0.16 3.5E-06 45.8 8.8 73 148-221 7-94 (334)
204 COG1748 LYS9 Saccharopine dehy 94.9 0.12 2.6E-06 47.2 7.8 89 150-240 2-99 (389)
205 PRK07677 short chain dehydroge 94.9 0.15 3.1E-06 43.8 8.2 41 149-190 1-41 (252)
206 PRK12829 short chain dehydroge 94.9 0.16 3.5E-06 43.8 8.5 75 146-221 8-95 (264)
207 PRK12809 putative oxidoreducta 94.9 0.12 2.7E-06 50.9 8.6 74 148-223 309-406 (639)
208 PRK08415 enoyl-(acyl carrier p 94.9 0.19 4.2E-06 43.9 9.0 73 148-221 4-92 (274)
209 PLN03139 formate dehydrogenase 94.9 0.18 3.8E-06 46.3 8.9 86 148-240 198-291 (386)
210 PRK08265 short chain dehydroge 94.8 0.18 4E-06 43.5 8.7 73 148-221 5-89 (261)
211 PRK07574 formate dehydrogenase 94.8 0.21 4.6E-06 45.8 9.3 86 148-240 191-284 (385)
212 PRK09291 short chain dehydroge 94.8 0.18 3.9E-06 43.3 8.7 72 149-221 2-82 (257)
213 PF05368 NmrA: NmrA-like famil 94.8 0.07 1.5E-06 45.3 5.9 69 152-221 1-73 (233)
214 PRK14191 bifunctional 5,10-met 94.8 0.3 6.5E-06 42.7 9.7 95 129-243 136-232 (285)
215 TIGR01832 kduD 2-deoxy-D-gluco 94.8 0.23 5E-06 42.4 9.2 73 148-221 4-89 (248)
216 PRK06500 short chain dehydroge 94.8 0.18 3.9E-06 43.0 8.5 73 148-221 5-89 (249)
217 PRK00258 aroE shikimate 5-dehy 94.8 0.12 2.6E-06 45.4 7.4 90 147-239 121-220 (278)
218 PRK05854 short chain dehydroge 94.8 0.2 4.3E-06 44.7 9.0 40 148-188 13-52 (313)
219 cd05311 NAD_bind_2_malic_enz N 94.8 0.88 1.9E-05 38.6 12.4 96 139-240 14-128 (226)
220 PRK07478 short chain dehydroge 94.8 0.22 4.7E-06 42.8 9.0 42 148-190 5-46 (254)
221 PRK08017 oxidoreductase; Provi 94.8 0.078 1.7E-06 45.5 6.2 71 150-221 3-83 (256)
222 PRK07424 bifunctional sterol d 94.7 0.086 1.9E-06 48.8 6.6 73 148-221 177-254 (406)
223 PRK12828 short chain dehydroge 94.7 0.2 4.3E-06 42.4 8.5 39 148-187 6-44 (239)
224 PRK06603 enoyl-(acyl carrier p 94.7 0.21 4.5E-06 43.2 8.8 36 148-184 7-44 (260)
225 TIGR01318 gltD_gamma_fam gluta 94.7 0.14 3.1E-06 48.5 8.2 75 147-223 139-237 (467)
226 PRK08261 fabG 3-ketoacyl-(acyl 94.7 0.023 5E-07 53.5 2.8 94 143-243 28-126 (450)
227 PRK09072 short chain dehydroge 94.6 0.24 5.1E-06 42.8 8.9 42 148-190 4-45 (263)
228 PRK07904 short chain dehydroge 94.6 0.27 5.9E-06 42.3 9.2 41 146-186 5-45 (253)
229 PRK07326 short chain dehydroge 94.6 0.24 5.2E-06 41.9 8.8 42 148-190 5-46 (237)
230 PRK08628 short chain dehydroge 94.6 0.26 5.5E-06 42.4 9.1 73 148-221 6-92 (258)
231 PRK06194 hypothetical protein; 94.6 0.23 4.9E-06 43.5 8.8 73 148-221 5-92 (287)
232 PRK06079 enoyl-(acyl carrier p 94.6 0.15 3.3E-06 43.9 7.5 73 148-221 6-92 (252)
233 PLN02986 cinnamyl-alcohol dehy 94.6 0.18 3.8E-06 45.1 8.2 73 148-221 4-86 (322)
234 KOG1199 Short-chain alcohol de 94.6 0.23 5.1E-06 39.5 7.6 73 148-221 8-92 (260)
235 PRK07890 short chain dehydroge 94.5 0.27 5.9E-06 42.2 9.0 43 147-190 3-45 (258)
236 PRK08589 short chain dehydroge 94.5 0.23 5E-06 43.2 8.6 36 148-184 5-40 (272)
237 PRK05876 short chain dehydroge 94.5 0.25 5.4E-06 43.2 8.7 40 148-188 5-44 (275)
238 PRK14189 bifunctional 5,10-met 94.4 0.5 1.1E-05 41.4 10.2 95 129-243 137-233 (285)
239 PRK08690 enoyl-(acyl carrier p 94.4 0.28 6.1E-06 42.4 8.9 73 148-221 5-93 (261)
240 PRK10792 bifunctional 5,10-met 94.4 0.53 1.1E-05 41.2 10.3 95 129-243 138-234 (285)
241 KOG0725 Reductases with broad 94.4 0.14 3.1E-06 44.7 6.9 43 147-190 6-48 (270)
242 COG1052 LdhA Lactate dehydroge 94.4 0.23 5E-06 44.5 8.3 137 148-311 145-291 (324)
243 PRK08159 enoyl-(acyl carrier p 94.4 0.29 6.3E-06 42.7 8.9 75 146-221 7-97 (272)
244 PRK14176 bifunctional 5,10-met 94.4 0.54 1.2E-05 41.1 10.2 95 129-243 143-239 (287)
245 KOG1252 Cystathionine beta-syn 94.3 0.15 3.3E-06 45.0 6.7 64 137-201 87-157 (362)
246 PRK12939 short chain dehydroge 94.3 0.31 6.7E-06 41.5 8.8 73 148-221 6-93 (250)
247 PRK06114 short chain dehydroge 94.3 0.36 7.9E-06 41.4 9.3 37 148-185 7-43 (254)
248 TIGR01777 yfcH conserved hypot 94.3 0.059 1.3E-06 47.2 4.4 66 152-221 1-66 (292)
249 PRK08862 short chain dehydroge 94.3 0.36 7.7E-06 40.9 9.0 41 148-189 4-44 (227)
250 PLN00141 Tic62-NAD(P)-related 94.2 0.22 4.8E-06 42.8 7.8 74 147-221 15-94 (251)
251 PRK08340 glucose-1-dehydrogena 94.2 0.32 7E-06 41.9 8.8 70 151-221 2-85 (259)
252 PRK08213 gluconate 5-dehydroge 94.2 0.31 6.7E-06 41.9 8.7 42 148-190 11-52 (259)
253 PLN02928 oxidoreductase family 94.2 0.24 5.2E-06 44.9 8.2 110 148-273 158-282 (347)
254 PRK05717 oxidoreductase; Valid 94.2 0.35 7.7E-06 41.5 9.0 73 148-221 9-93 (255)
255 PRK12481 2-deoxy-D-gluconate 3 94.2 0.28 6E-06 42.2 8.3 73 148-221 7-92 (251)
256 PRK06483 dihydromonapterin red 94.2 0.4 8.7E-06 40.6 9.3 72 149-221 2-83 (236)
257 PRK13394 3-hydroxybutyrate deh 94.2 0.34 7.3E-06 41.7 8.9 40 148-188 6-45 (262)
258 PRK08264 short chain dehydroge 94.1 0.31 6.8E-06 41.3 8.5 71 148-222 5-83 (238)
259 PRK12823 benD 1,6-dihydroxycyc 94.1 0.27 5.9E-06 42.3 8.2 73 148-221 7-93 (260)
260 PRK12769 putative oxidoreducta 94.1 0.22 4.8E-06 49.3 8.5 75 147-223 325-423 (654)
261 PF01262 AlaDh_PNT_C: Alanine 94.1 0.11 2.5E-06 41.7 5.4 90 149-240 20-139 (168)
262 PRK07454 short chain dehydroge 94.1 0.44 9.5E-06 40.5 9.2 42 147-189 4-45 (241)
263 PRK06125 short chain dehydroge 94.0 0.41 8.9E-06 41.2 9.1 73 148-221 6-90 (259)
264 PRK07502 cyclohexadienyl dehyd 94.0 0.38 8.2E-06 42.9 9.0 86 150-240 7-100 (307)
265 cd05212 NAD_bind_m-THF_DH_Cycl 94.0 1.2 2.5E-05 34.7 10.5 94 130-243 8-103 (140)
266 PRK07774 short chain dehydroge 94.0 0.37 8E-06 41.1 8.7 39 148-187 5-43 (250)
267 PRK08643 acetoin reductase; Va 94.0 0.4 8.6E-06 41.2 8.9 40 149-189 2-41 (256)
268 PF01135 PCMT: Protein-L-isoas 94.0 0.34 7.4E-06 40.5 8.0 98 139-239 63-171 (209)
269 PRK12384 sorbitol-6-phosphate 94.0 0.39 8.5E-06 41.3 8.8 38 149-187 2-39 (259)
270 KOG1210 Predicted 3-ketosphing 93.9 0.6 1.3E-05 41.0 9.6 51 143-194 27-78 (331)
271 PRK08277 D-mannonate oxidoredu 93.9 0.38 8.3E-06 41.9 8.8 39 148-187 9-47 (278)
272 TIGR01809 Shik-DH-AROM shikima 93.9 0.21 4.5E-06 43.9 7.0 72 148-221 124-199 (282)
273 PRK06914 short chain dehydroge 93.9 0.4 8.7E-06 41.8 8.9 41 149-190 3-43 (280)
274 PRK06179 short chain dehydroge 93.9 0.072 1.6E-06 46.3 4.1 71 148-221 3-82 (270)
275 PF01118 Semialdhyde_dh: Semia 93.9 0.17 3.8E-06 38.2 5.7 89 151-242 1-99 (121)
276 PLN02989 cinnamyl-alcohol dehy 93.9 0.27 5.8E-06 44.0 7.9 73 148-221 4-86 (325)
277 PRK06720 hypothetical protein; 93.9 0.53 1.2E-05 37.9 8.8 39 148-187 15-53 (169)
278 PRK13942 protein-L-isoaspartat 93.9 1.2 2.7E-05 37.2 11.4 99 140-240 68-176 (212)
279 PRK05875 short chain dehydroge 93.8 0.37 8.1E-06 41.9 8.5 40 148-188 6-45 (276)
280 PRK14173 bifunctional 5,10-met 93.8 0.74 1.6E-05 40.3 10.1 95 129-243 134-230 (287)
281 PF13823 ADH_N_assoc: Alcohol 93.8 0.051 1.1E-06 27.8 1.7 22 2-26 1-22 (23)
282 PRK07024 short chain dehydroge 93.8 0.45 9.7E-06 41.0 8.9 41 149-190 2-42 (257)
283 PRK08226 short chain dehydroge 93.8 0.39 8.4E-06 41.4 8.5 42 148-190 5-46 (263)
284 PRK06484 short chain dehydroge 93.8 0.31 6.7E-06 46.8 8.6 73 148-221 4-88 (520)
285 PRK13243 glyoxylate reductase; 93.8 0.37 8E-06 43.5 8.5 104 148-273 149-260 (333)
286 PRK05653 fabG 3-ketoacyl-(acyl 93.8 0.46 1E-05 40.2 8.9 41 148-189 4-44 (246)
287 PRK06198 short chain dehydroge 93.8 0.38 8.2E-06 41.4 8.4 74 147-221 4-93 (260)
288 PLN02253 xanthoxin dehydrogena 93.7 0.42 9.2E-06 41.7 8.7 73 148-221 17-103 (280)
289 PRK15469 ghrA bifunctional gly 93.7 0.39 8.5E-06 42.8 8.5 104 148-273 135-246 (312)
290 PRK06181 short chain dehydroge 93.7 0.42 9.2E-06 41.2 8.6 39 149-188 1-39 (263)
291 PRK07832 short chain dehydroge 93.7 0.33 7.2E-06 42.2 8.0 38 150-188 1-38 (272)
292 PRK08251 short chain dehydroge 93.7 0.5 1.1E-05 40.3 8.9 41 149-190 2-42 (248)
293 PRK08618 ornithine cyclodeamin 93.6 1.6 3.5E-05 39.2 12.4 96 142-243 120-224 (325)
294 PRK07856 short chain dehydroge 93.6 0.41 9E-06 41.0 8.4 38 148-186 5-42 (252)
295 cd01079 NAD_bind_m-THF_DH NAD 93.6 0.92 2E-05 37.2 9.6 111 129-242 32-158 (197)
296 COG0031 CysK Cysteine synthase 93.6 0.55 1.2E-05 41.3 8.9 61 140-202 53-116 (300)
297 PRK08339 short chain dehydroge 93.6 0.16 3.5E-06 44.0 5.7 42 148-190 7-48 (263)
298 PRK08317 hypothetical protein; 93.6 0.58 1.3E-05 39.5 9.2 98 141-240 12-124 (241)
299 PRK06935 2-deoxy-D-gluconate 3 93.6 0.56 1.2E-05 40.3 9.1 35 148-183 14-48 (258)
300 PRK08263 short chain dehydroge 93.6 0.53 1.2E-05 41.0 9.0 72 149-221 3-86 (275)
301 PRK07984 enoyl-(acyl carrier p 93.5 0.59 1.3E-05 40.5 9.2 36 148-184 5-42 (262)
302 KOG1201 Hydroxysteroid 17-beta 93.5 0.5 1.1E-05 41.2 8.4 73 147-221 36-123 (300)
303 PRK14192 bifunctional 5,10-met 93.5 0.42 9.1E-06 41.9 8.2 83 141-243 150-234 (283)
304 PRK06128 oxidoreductase; Provi 93.5 0.55 1.2E-05 41.6 9.1 35 148-183 54-88 (300)
305 PRK06482 short chain dehydroge 93.5 0.52 1.1E-05 41.0 8.8 71 150-221 3-85 (276)
306 PRK08267 short chain dehydroge 93.5 0.52 1.1E-05 40.6 8.7 71 150-221 2-86 (260)
307 PLN02780 ketoreductase/ oxidor 93.5 0.16 3.5E-06 45.5 5.7 42 148-190 52-93 (320)
308 COG2910 Putative NADH-flavin r 93.5 0.15 3.2E-06 41.2 4.6 89 151-243 2-107 (211)
309 KOG1200 Mitochondrial/plastidi 93.5 0.4 8.7E-06 39.1 7.1 72 149-221 14-99 (256)
310 PRK08303 short chain dehydroge 93.4 0.59 1.3E-05 41.6 9.2 35 148-183 7-41 (305)
311 PRK05884 short chain dehydroge 93.4 0.49 1.1E-05 39.9 8.3 70 151-221 2-78 (223)
312 TIGR03206 benzo_BadH 2-hydroxy 93.4 0.55 1.2E-05 40.0 8.7 41 148-189 2-42 (250)
313 PRK06398 aldose dehydrogenase; 93.4 0.41 9E-06 41.3 8.0 38 148-186 5-42 (258)
314 PRK14177 bifunctional 5,10-met 93.4 1 2.2E-05 39.3 10.1 95 129-243 138-234 (284)
315 PRK06463 fabG 3-ketoacyl-(acyl 93.4 0.7 1.5E-05 39.6 9.3 73 148-221 6-88 (255)
316 PRK12549 shikimate 5-dehydroge 93.4 0.34 7.4E-06 42.6 7.3 71 147-221 125-201 (284)
317 PRK10538 malonic semialdehyde 93.3 0.5 1.1E-05 40.4 8.3 70 151-221 2-83 (248)
318 PRK14190 bifunctional 5,10-met 93.3 1 2.2E-05 39.4 10.1 95 129-243 137-233 (284)
319 PRK08993 2-deoxy-D-gluconate 3 93.3 0.58 1.2E-05 40.2 8.7 73 148-221 9-94 (253)
320 PRK06484 short chain dehydroge 93.3 0.51 1.1E-05 45.3 9.2 74 147-221 267-352 (520)
321 PRK07231 fabG 3-ketoacyl-(acyl 93.3 0.2 4.3E-06 42.8 5.8 42 148-190 4-45 (251)
322 PRK08278 short chain dehydroge 93.3 0.66 1.4E-05 40.4 9.1 37 148-185 5-41 (273)
323 PRK14169 bifunctional 5,10-met 93.2 1.1 2.4E-05 39.1 10.2 95 129-243 135-231 (282)
324 PRK07806 short chain dehydroge 93.2 0.72 1.6E-05 39.3 9.2 36 148-184 5-40 (248)
325 PLN02662 cinnamyl-alcohol dehy 93.2 0.42 9E-06 42.6 8.0 73 148-221 3-85 (322)
326 PRK07074 short chain dehydroge 93.2 0.67 1.5E-05 39.8 9.0 72 149-221 2-86 (257)
327 PLN02427 UDP-apiose/xylose syn 93.2 0.33 7.2E-06 44.7 7.4 78 144-221 9-95 (386)
328 PRK06953 short chain dehydroge 93.2 0.47 1E-05 39.8 7.8 71 150-221 2-79 (222)
329 PF13241 NAD_binding_7: Putati 93.2 0.31 6.7E-06 35.7 5.9 83 148-240 6-91 (103)
330 PRK06138 short chain dehydroge 93.2 0.52 1.1E-05 40.2 8.2 73 148-221 4-90 (252)
331 PRK14172 bifunctional 5,10-met 93.1 1.2 2.6E-05 38.8 10.2 95 129-243 137-233 (278)
332 PLN02686 cinnamoyl-CoA reducta 93.1 0.27 5.9E-06 45.0 6.6 43 147-190 51-93 (367)
333 PRK14180 bifunctional 5,10-met 93.1 1.2 2.6E-05 38.9 10.2 95 129-243 137-233 (282)
334 PRK12743 oxidoreductase; Provi 93.1 0.71 1.5E-05 39.7 8.9 33 149-182 2-34 (256)
335 PRK14170 bifunctional 5,10-met 93.1 1.1 2.5E-05 39.0 10.0 95 129-243 136-232 (284)
336 PF03435 Saccharop_dh: Sacchar 93.1 0.21 4.6E-06 46.0 5.9 87 152-239 1-97 (386)
337 PRK07791 short chain dehydroge 93.1 0.8 1.7E-05 40.2 9.4 37 147-184 4-40 (286)
338 PRK13944 protein-L-isoaspartat 93.0 1.5 3.2E-05 36.5 10.4 97 141-239 65-172 (205)
339 PRK06113 7-alpha-hydroxysteroi 93.0 0.74 1.6E-05 39.5 8.9 40 148-188 10-49 (255)
340 TIGR03466 HpnA hopanoid-associ 93.0 0.17 3.8E-06 45.1 5.1 70 151-221 2-73 (328)
341 COG0373 HemA Glutamyl-tRNA red 93.0 2.6 5.7E-05 38.9 12.6 96 144-244 173-278 (414)
342 PLN02695 GDP-D-mannose-3',5'-e 92.9 0.26 5.6E-06 45.2 6.2 74 147-221 19-94 (370)
343 PRK07576 short chain dehydroge 92.9 0.25 5.3E-06 42.9 5.8 40 148-188 8-47 (264)
344 PRK08594 enoyl-(acyl carrier p 92.9 0.79 1.7E-05 39.5 9.0 35 148-183 6-42 (257)
345 TIGR02632 RhaD_aldol-ADH rhamn 92.9 0.58 1.3E-05 46.5 9.0 41 148-189 413-453 (676)
346 PRK12936 3-ketoacyl-(acyl-carr 92.9 0.73 1.6E-05 39.0 8.7 73 148-221 5-89 (245)
347 PRK08410 2-hydroxyacid dehydro 92.9 0.41 8.9E-06 42.7 7.2 101 148-273 144-252 (311)
348 PRK07523 gluconate 5-dehydroge 92.9 0.25 5.4E-06 42.4 5.7 40 148-188 9-48 (255)
349 PRK07063 short chain dehydroge 92.8 0.25 5.5E-06 42.5 5.8 42 148-190 6-47 (260)
350 PRK07775 short chain dehydroge 92.8 0.76 1.6E-05 40.0 8.8 72 149-221 10-96 (274)
351 PRK08703 short chain dehydroge 92.8 0.27 5.8E-06 41.8 5.9 42 148-190 5-46 (239)
352 PRK14027 quinate/shikimate deh 92.8 0.75 1.6E-05 40.4 8.7 73 147-221 125-203 (283)
353 PRK07062 short chain dehydroge 92.8 0.27 5.8E-06 42.5 5.9 41 148-189 7-47 (265)
354 PLN02657 3,8-divinyl protochlo 92.8 0.71 1.5E-05 42.7 8.9 78 143-221 54-145 (390)
355 PRK14103 trans-aconitate 2-met 92.8 0.82 1.8E-05 39.4 8.9 95 141-239 22-125 (255)
356 PRK06997 enoyl-(acyl carrier p 92.8 0.69 1.5E-05 40.0 8.4 73 148-221 5-93 (260)
357 PRK14187 bifunctional 5,10-met 92.7 1.4 3E-05 38.8 10.0 95 129-243 139-235 (294)
358 PRK14171 bifunctional 5,10-met 92.7 1.4 3.1E-05 38.6 10.1 95 129-243 138-234 (288)
359 TIGR00080 pimt protein-L-isoas 92.7 2.1 4.5E-05 35.9 11.0 97 140-239 69-176 (215)
360 PLN02516 methylenetetrahydrofo 92.7 1.6 3.4E-05 38.5 10.3 95 129-243 146-242 (299)
361 PRK14186 bifunctional 5,10-met 92.7 1.5 3.3E-05 38.6 10.2 95 129-243 137-233 (297)
362 PF00106 adh_short: short chai 92.7 0.42 9.1E-06 37.9 6.5 33 150-183 1-34 (167)
363 PRK14166 bifunctional 5,10-met 92.7 1.5 3.2E-05 38.3 10.1 95 129-243 136-232 (282)
364 PRK13403 ketol-acid reductoiso 92.6 0.98 2.1E-05 40.2 9.0 84 147-238 14-104 (335)
365 PRK00107 gidB 16S rRNA methylt 92.5 0.87 1.9E-05 37.4 8.1 92 146-240 43-145 (187)
366 PRK14188 bifunctional 5,10-met 92.5 1.5 3.3E-05 38.6 10.1 94 129-243 137-233 (296)
367 PLN02214 cinnamoyl-CoA reducta 92.5 0.55 1.2E-05 42.5 7.7 73 148-221 9-90 (342)
368 PRK07035 short chain dehydroge 92.5 0.31 6.6E-06 41.8 5.8 41 148-189 7-47 (252)
369 PRK09186 flagellin modificatio 92.5 0.31 6.7E-06 41.8 5.8 41 148-189 3-43 (256)
370 PLN00198 anthocyanidin reducta 92.5 0.61 1.3E-05 42.0 8.0 74 147-221 7-89 (338)
371 PRK08287 cobalt-precorrin-6Y C 92.5 1.7 3.8E-05 35.4 10.0 95 141-239 24-130 (187)
372 PRK14194 bifunctional 5,10-met 92.5 1.5 3.3E-05 38.7 10.0 95 129-243 138-234 (301)
373 COG0169 AroE Shikimate 5-dehyd 92.5 0.45 9.8E-06 41.7 6.7 73 147-221 124-199 (283)
374 PF02254 TrkA_N: TrkA-N domain 92.4 2.1 4.6E-05 31.7 9.6 68 152-222 1-72 (116)
375 PRK14982 acyl-ACP reductase; P 92.4 0.74 1.6E-05 41.5 8.1 92 147-243 153-249 (340)
376 PRK07453 protochlorophyllide o 92.3 0.31 6.6E-06 43.7 5.8 41 148-189 5-45 (322)
377 KOG1502 Flavonol reductase/cin 92.3 0.68 1.5E-05 41.2 7.7 73 148-221 5-87 (327)
378 PRK14193 bifunctional 5,10-met 92.3 1.6 3.4E-05 38.3 9.8 94 130-243 138-235 (284)
379 PRK14183 bifunctional 5,10-met 92.3 1.7 3.7E-05 37.9 10.0 95 129-243 136-232 (281)
380 PRK06172 short chain dehydroge 92.3 0.33 7.2E-06 41.6 5.7 40 148-188 6-45 (253)
381 PRK06197 short chain dehydroge 92.3 0.29 6.2E-06 43.5 5.5 40 148-188 15-54 (306)
382 TIGR01289 LPOR light-dependent 92.3 0.92 2E-05 40.5 8.8 40 149-189 3-43 (314)
383 PRK15409 bifunctional glyoxyla 92.3 0.8 1.7E-05 41.1 8.3 104 148-273 144-256 (323)
384 PRK06932 glycerate dehydrogena 92.2 0.69 1.5E-05 41.4 7.8 100 148-273 146-253 (314)
385 PRK08063 enoyl-(acyl carrier p 92.2 0.85 1.8E-05 38.9 8.3 39 148-187 3-42 (250)
386 PLN03075 nicotianamine synthas 92.2 1.1 2.3E-05 39.5 8.7 93 147-240 122-233 (296)
387 PRK08085 gluconate 5-dehydroge 92.1 0.34 7.4E-06 41.5 5.7 40 148-188 8-47 (254)
388 PRK12938 acetyacetyl-CoA reduc 92.1 1.2 2.6E-05 37.8 9.1 73 148-221 2-90 (246)
389 TIGR00507 aroE shikimate 5-deh 92.1 1.4 3E-05 38.5 9.5 89 146-240 114-214 (270)
390 PLN02896 cinnamyl-alcohol dehy 92.1 1 2.2E-05 40.9 9.0 74 147-221 8-88 (353)
391 PRK12548 shikimate 5-dehydroge 92.1 0.49 1.1E-05 41.7 6.7 73 147-221 124-208 (289)
392 PLN02650 dihydroflavonol-4-red 92.1 0.67 1.5E-05 42.0 7.8 73 148-221 4-86 (351)
393 COG2226 UbiE Methylase involve 92.0 1.2 2.5E-05 38.0 8.5 108 133-243 34-159 (238)
394 PRK08125 bifunctional UDP-gluc 92.0 0.67 1.4E-05 46.0 8.2 76 146-221 312-391 (660)
395 PRK05650 short chain dehydroge 92.0 1.1 2.5E-05 38.7 8.9 70 151-221 2-86 (270)
396 PRK08261 fabG 3-ketoacyl-(acyl 92.0 0.88 1.9E-05 42.8 8.7 73 148-221 209-293 (450)
397 PRK06101 short chain dehydroge 92.0 0.34 7.4E-06 41.2 5.5 42 150-192 2-43 (240)
398 PRK01438 murD UDP-N-acetylmura 92.0 0.79 1.7E-05 43.6 8.4 69 147-221 14-87 (480)
399 PLN02616 tetrahydrofolate dehy 92.0 1.7 3.7E-05 39.2 9.8 94 130-243 211-306 (364)
400 PRK08945 putative oxoacyl-(acy 91.9 0.4 8.7E-06 40.9 5.9 41 146-187 9-49 (247)
401 PF02670 DXP_reductoisom: 1-de 91.9 0.68 1.5E-05 35.3 6.3 86 152-237 1-118 (129)
402 PRK07340 ornithine cyclodeamin 91.9 1.8 3.9E-05 38.5 10.1 96 142-243 118-220 (304)
403 PLN02897 tetrahydrofolate dehy 91.9 1.8 3.8E-05 38.9 9.7 95 129-243 193-289 (345)
404 PRK07889 enoyl-(acyl carrier p 91.8 1.1 2.5E-05 38.5 8.6 73 148-221 6-94 (256)
405 PRK07067 sorbitol dehydrogenas 91.8 0.39 8.4E-06 41.3 5.7 73 148-221 5-89 (257)
406 PRK14182 bifunctional 5,10-met 91.8 2.2 4.8E-05 37.3 10.1 94 130-243 137-232 (282)
407 PRK05565 fabG 3-ketoacyl-(acyl 91.8 1 2.2E-05 38.2 8.2 39 149-188 5-44 (247)
408 PRK12480 D-lactate dehydrogena 91.8 1.2 2.7E-05 40.0 8.9 102 148-273 145-254 (330)
409 PRK05557 fabG 3-ketoacyl-(acyl 91.8 1.4 2.9E-05 37.4 9.0 37 148-185 4-40 (248)
410 PRK06701 short chain dehydroge 91.8 1.2 2.6E-05 39.3 8.8 37 147-184 44-80 (290)
411 PRK13581 D-3-phosphoglycerate 91.7 1 2.3E-05 43.3 8.9 83 148-239 139-229 (526)
412 PRK12429 3-hydroxybutyrate deh 91.7 0.43 9.4E-06 40.8 5.8 41 148-189 3-43 (258)
413 PRK13656 trans-2-enoyl-CoA red 91.7 1.4 3.1E-05 40.3 9.1 34 147-182 39-74 (398)
414 PRK12937 short chain dehydroge 91.7 1.4 2.9E-05 37.4 8.9 35 148-183 4-38 (245)
415 PRK12749 quinate/shikimate deh 91.7 1.6 3.5E-05 38.4 9.4 72 148-221 123-205 (288)
416 TIGR03589 PseB UDP-N-acetylglu 91.6 1.2 2.6E-05 39.9 8.8 74 148-221 3-83 (324)
417 PRK06124 gluconate 5-dehydroge 91.6 0.46 9.9E-06 40.8 5.8 40 148-188 10-49 (256)
418 PRK03562 glutathione-regulated 91.5 0.75 1.6E-05 45.2 7.9 88 149-239 400-497 (621)
419 KOG1014 17 beta-hydroxysteroid 91.5 1.2 2.5E-05 39.2 8.0 73 147-221 47-135 (312)
420 PRK10258 biotin biosynthesis p 91.5 1.8 4E-05 37.1 9.5 95 142-240 36-140 (251)
421 PRK08655 prephenate dehydrogen 91.4 1.1 2.4E-05 42.0 8.6 65 151-221 2-67 (437)
422 PRK14178 bifunctional 5,10-met 91.4 2.1 4.5E-05 37.4 9.5 95 129-243 131-227 (279)
423 PRK09242 tropinone reductase; 91.4 0.47 1E-05 40.8 5.8 42 148-190 8-49 (257)
424 PLN00203 glutamyl-tRNA reducta 91.4 0.81 1.8E-05 43.8 7.7 73 149-223 266-340 (519)
425 PRK06436 glycerate dehydrogena 91.4 1.2 2.5E-05 39.6 8.3 81 148-240 121-209 (303)
426 COG4122 Predicted O-methyltran 91.4 1.9 4.2E-05 36.2 9.0 96 143-240 54-166 (219)
427 COG1712 Predicted dinucleotide 91.4 6.4 0.00014 33.1 11.8 85 151-241 2-92 (255)
428 PRK10669 putative cation:proto 91.4 0.7 1.5E-05 44.9 7.4 71 149-222 417-491 (558)
429 PRK06487 glycerate dehydrogena 91.4 0.91 2E-05 40.6 7.6 99 148-273 147-253 (317)
430 PRK01683 trans-aconitate 2-met 91.3 1.6 3.5E-05 37.6 9.0 96 141-239 24-129 (258)
431 PRK07370 enoyl-(acyl carrier p 91.3 0.96 2.1E-05 39.0 7.6 35 148-183 5-41 (258)
432 PF03446 NAD_binding_2: NAD bi 91.3 1.1 2.4E-05 35.7 7.5 84 150-240 2-94 (163)
433 KOG0069 Glyoxylate/hydroxypyru 91.3 1.3 2.9E-05 39.6 8.4 87 147-241 160-254 (336)
434 KOG4022 Dihydropteridine reduc 91.2 1.6 3.4E-05 34.6 7.7 67 149-221 3-81 (236)
435 TIGR01963 PHB_DH 3-hydroxybuty 91.2 0.43 9.4E-06 40.8 5.4 41 149-190 1-41 (255)
436 PRK12826 3-ketoacyl-(acyl-carr 91.2 0.47 1E-05 40.4 5.5 39 148-187 5-43 (251)
437 TIGR01327 PGDH D-3-phosphoglyc 91.2 1.3 2.8E-05 42.6 9.0 66 148-221 137-202 (525)
438 PRK00216 ubiE ubiquinone/menaq 91.1 3.2 6.9E-05 35.0 10.6 99 141-242 44-160 (239)
439 PRK14179 bifunctional 5,10-met 91.1 2.3 5E-05 37.2 9.6 95 129-243 137-233 (284)
440 PRK03659 glutathione-regulated 91.1 0.81 1.8E-05 44.9 7.6 88 149-239 400-497 (601)
441 PRK11908 NAD-dependent epimera 91.1 0.76 1.6E-05 41.6 7.0 72 150-221 2-77 (347)
442 PRK14185 bifunctional 5,10-met 91.0 2.8 6.2E-05 36.8 10.1 98 129-243 136-236 (293)
443 PRK05599 hypothetical protein; 91.0 1.6 3.4E-05 37.4 8.6 38 151-190 2-39 (246)
444 PRK08219 short chain dehydroge 91.0 1.6 3.4E-05 36.5 8.5 71 149-221 3-80 (227)
445 PRK05855 short chain dehydroge 91.0 1.2 2.6E-05 43.2 8.8 74 147-221 313-401 (582)
446 PLN02206 UDP-glucuronate decar 91.0 0.89 1.9E-05 42.8 7.5 71 147-221 117-192 (442)
447 PRK07666 fabG 3-ketoacyl-(acyl 90.9 0.58 1.3E-05 39.7 5.8 40 148-188 6-45 (239)
448 COG0499 SAM1 S-adenosylhomocys 90.9 1.3 2.7E-05 39.8 7.7 88 146-241 206-297 (420)
449 PLN02166 dTDP-glucose 4,6-dehy 90.8 1.1 2.4E-05 42.1 7.9 72 147-221 118-193 (436)
450 PRK06718 precorrin-2 dehydroge 90.8 2.2 4.7E-05 35.5 8.9 87 148-239 9-99 (202)
451 TIGR01470 cysG_Nterm siroheme 90.8 3.5 7.7E-05 34.3 10.2 88 148-239 8-99 (205)
452 KOG1208 Dehydrogenases with di 90.8 0.55 1.2E-05 41.9 5.6 43 147-190 33-75 (314)
453 TIGR01532 E4PD_g-proteo D-eryt 90.7 3.5 7.6E-05 37.0 10.6 92 151-243 1-123 (325)
454 COG0702 Predicted nucleoside-d 90.7 0.72 1.6E-05 39.9 6.3 69 151-221 2-72 (275)
455 PRK07985 oxidoreductase; Provi 90.7 1.8 3.8E-05 38.2 8.8 35 148-183 48-82 (294)
456 COG1090 Predicted nucleoside-d 90.6 0.53 1.2E-05 40.6 5.0 65 152-222 1-66 (297)
457 PRK14184 bifunctional 5,10-met 90.6 2.7 5.8E-05 36.9 9.5 95 129-243 136-236 (286)
458 PRK07792 fabG 3-ketoacyl-(acyl 90.6 1.8 4E-05 38.4 8.9 35 148-183 11-45 (306)
459 PRK06719 precorrin-2 dehydroge 90.6 1.8 3.9E-05 34.4 7.9 70 148-223 12-81 (157)
460 COG0111 SerA Phosphoglycerate 90.5 1.5 3.2E-05 39.4 8.1 32 149-182 142-173 (324)
461 COG2519 GCD14 tRNA(1-methylade 90.5 3.7 8E-05 35.1 9.9 99 140-240 86-195 (256)
462 PLN03013 cysteine synthase 90.4 2 4.2E-05 40.1 9.0 58 142-200 167-227 (429)
463 PRK14106 murD UDP-N-acetylmura 90.4 1.8 3.9E-05 40.7 9.1 69 148-221 4-77 (450)
464 PRK08220 2,3-dihydroxybenzoate 90.4 1.7 3.8E-05 37.0 8.3 36 148-184 7-42 (252)
465 cd01075 NAD_bind_Leu_Phe_Val_D 90.3 0.78 1.7E-05 38.1 5.8 67 147-220 26-93 (200)
466 PRK06141 ornithine cyclodeamin 90.2 4.7 0.0001 36.1 11.1 96 143-242 119-221 (314)
467 PRK05447 1-deoxy-D-xylulose 5- 90.2 1.5 3.2E-05 40.1 7.9 90 150-239 2-121 (385)
468 PRK07097 gluconate 5-dehydroge 90.2 0.71 1.5E-05 39.9 5.8 73 148-221 9-96 (265)
469 COG0144 Sun tRNA and rRNA cyto 90.2 2.9 6.3E-05 38.1 9.9 76 142-218 150-236 (355)
470 PRK12550 shikimate 5-dehydroge 90.2 1.1 2.5E-05 39.1 6.9 73 140-221 113-187 (272)
471 PRK12935 acetoacetyl-CoA reduc 90.1 2.3 4.9E-05 36.1 8.8 34 148-182 5-38 (247)
472 PRK07102 short chain dehydroge 90.1 0.69 1.5E-05 39.3 5.5 38 150-188 2-39 (243)
473 PRK14181 bifunctional 5,10-met 90.0 4 8.7E-05 35.8 10.1 98 129-243 132-232 (287)
474 TIGR02685 pter_reduc_Leis pter 90.0 1.7 3.7E-05 37.6 8.1 32 150-182 2-33 (267)
475 PLN02233 ubiquinone biosynthes 90.0 2.9 6.2E-05 36.3 9.3 100 142-243 67-185 (261)
476 PRK06523 short chain dehydroge 90.0 0.56 1.2E-05 40.3 4.9 37 148-185 8-44 (260)
477 PRK12746 short chain dehydroge 90.0 1.9 4.1E-05 36.8 8.3 39 148-187 5-44 (254)
478 PRK07023 short chain dehydroge 89.9 1.4 3.1E-05 37.4 7.3 35 151-186 3-37 (243)
479 PRK12745 3-ketoacyl-(acyl-carr 89.8 2.4 5.1E-05 36.2 8.8 34 150-184 3-36 (256)
480 PF01113 DapB_N: Dihydrodipico 89.8 0.36 7.7E-06 36.7 3.2 91 151-241 2-98 (124)
481 PLN02306 hydroxypyruvate reduc 89.8 1.7 3.6E-05 40.1 8.0 91 148-240 164-272 (386)
482 TIGR00715 precor6x_red precorr 89.8 1.1 2.3E-05 38.8 6.4 70 151-222 2-75 (256)
483 TIGR02992 ectoine_eutC ectoine 89.8 7.4 0.00016 35.0 12.1 94 146-243 126-227 (326)
484 PRK09134 short chain dehydroge 89.8 2.5 5.5E-05 36.2 8.9 35 148-183 8-42 (258)
485 PRK07201 short chain dehydroge 89.7 1.7 3.6E-05 43.1 8.7 41 149-190 371-411 (657)
486 PRK06077 fabG 3-ketoacyl-(acyl 89.6 2.1 4.6E-05 36.4 8.3 33 149-182 6-38 (252)
487 PF08704 GCD14: tRNA methyltra 89.6 1.1 2.4E-05 38.4 6.2 99 140-240 32-146 (247)
488 PRK07417 arogenate dehydrogena 89.6 2.2 4.7E-05 37.4 8.4 65 151-221 2-66 (279)
489 COG2264 PrmA Ribosomal protein 89.5 3.8 8.3E-05 36.1 9.6 141 79-241 109-264 (300)
490 PLN02583 cinnamoyl-CoA reducta 89.5 0.93 2E-05 40.1 6.1 36 148-184 5-40 (297)
491 PRK00312 pcm protein-L-isoaspa 89.5 7.4 0.00016 32.4 11.2 96 141-240 71-175 (212)
492 PF06325 PrmA: Ribosomal prote 89.4 1.1 2.5E-05 39.5 6.4 91 146-242 159-261 (295)
493 KOG4169 15-hydroxyprostaglandi 89.3 0.61 1.3E-05 39.1 4.3 45 149-194 5-49 (261)
494 COG3268 Uncharacterized conser 89.3 0.88 1.9E-05 40.3 5.5 89 150-239 7-103 (382)
495 PRK00436 argC N-acetyl-gamma-g 89.3 2 4.3E-05 39.0 8.1 90 150-240 3-99 (343)
496 PRK14168 bifunctional 5,10-met 89.3 4.1 9E-05 35.9 9.7 96 129-243 140-240 (297)
497 PF01370 Epimerase: NAD depend 89.2 1.8 3.9E-05 36.4 7.4 70 152-222 1-75 (236)
498 PRK11761 cysM cysteine synthas 89.2 3.5 7.7E-05 36.5 9.4 59 141-201 55-116 (296)
499 PRK12814 putative NADPH-depend 89.1 2.3 5E-05 42.2 9.0 74 147-222 191-288 (652)
500 PLN02730 enoyl-[acyl-carrier-p 89.1 0.94 2E-05 40.3 5.7 37 148-186 8-46 (303)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.3e-55 Score=380.99 Aligned_cols=302 Identities=29% Similarity=0.443 Sum_probs=269.0
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
|||++++.+++++ +++.+++.|.|+++||+|+|+|+|+|+||+|.++|.++...+|+++|||.+|+|+++|++|+.++
T Consensus 3 ~mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 3 TMKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred ceEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 7999999999987 99999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCCEEEE-e------------cccccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320 81 TGDEVYG-N------------IQDFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK 142 (327)
Q Consensus 81 ~Gd~V~~-~------------~~~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~ 142 (327)
+||||.. + .+..+.|. +.+.+|+|+||+++++.+++++|+++++..||.+.++..|.|++++
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk 160 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALK 160 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehh
Confidence 9999965 2 12334442 4568999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhcc-CccEEEeCCC
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE-KFDVLYDTIG 221 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~d~v~d~~g 221 (327)
..+++||++|+|+| .|++|++++|+||++ |+++++.++++++++.++++|++++++.++.+...... .+|+++++++
T Consensus 161 ~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~ 238 (339)
T COG1064 161 KANVKPGKWVAVVG-AGGLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG 238 (339)
T ss_pred hcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC
Confidence 99999999999999 789999999999999 89999999999999999999999999877555555443 4999999999
Q ss_pred C--chhhhhhhcCCCcEEEeeCCC-CC-C-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhh
Q 020320 222 D--CKNSFVVAKDNAPIVDITWPP-SH-P-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKD 286 (327)
Q Consensus 222 ~--~~~~~~~l~~~g~~v~~g~~~-~~-~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 286 (327)
. .+.+++.|+++|+++.+|.+. .. + ..+..+......++++++++.++|++++.. .+.++++|
T Consensus 239 ~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i--~e~~~l~~ 316 (339)
T COG1064 239 PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEI--LETIPLDE 316 (339)
T ss_pred hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeE--EeeECHHH
Confidence 3 278899999999999999874 21 1 123345566789999999999999999974 26999999
Q ss_pred HHHHHHHHHhCCCCceEEEEeC
Q 020320 287 VIEAFRYLETGRARGKVVISAF 308 (327)
Q Consensus 287 i~~a~~~~~~~~~~gk~vv~~~ 308 (327)
+++||+.|.+++..++.|+.+.
T Consensus 317 in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 317 INEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHHHcCCeeeEEEecCC
Confidence 9999999999999999999874
No 2
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-49 Score=333.00 Aligned_cols=302 Identities=25% Similarity=0.351 Sum_probs=253.0
Q ss_pred CceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSV 76 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v 76 (327)
+|+++++..+++ +++.+.|.|++ .|+||+|++.++|||+||+|.+..... ..+-|+++|||.+|+|+++|++|
T Consensus 4 ~~~A~vl~g~~d---i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~V 80 (354)
T KOG0024|consen 4 DNLALVLRGKGD---IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEV 80 (354)
T ss_pred ccceeEEEccCc---eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccc
Confidence 589999999998 99999999988 999999999999999999999976642 23579999999999999999999
Q ss_pred CCCCCCCEEEEec------------ccccccC------cCCCCCceeeEEEeeccceecCCCCCCHHhhccc-chHHHHH
Q 020320 77 TKFNTGDEVYGNI------------QDFNAEG------KLKQLGALAEFIVVEESLIAKKPKNISFEEAASL-PLAVQTA 137 (327)
Q Consensus 77 ~~~~~Gd~V~~~~------------~~~~~~~------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~-~~~~~ta 137 (327)
+++++||||..-+ +.||.|. .-..+|++++|++.++++++++|++++++++|++ |++ ++
T Consensus 81 k~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLs--V~ 158 (354)
T KOG0024|consen 81 KHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLS--VG 158 (354)
T ss_pred cccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchh--hh
Confidence 9999999996432 3466663 3346699999999999999999999999999987 655 59
Q ss_pred HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC----hhhhc---
Q 020320 138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK----YEDIE--- 210 (327)
Q Consensus 138 ~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~~~--- 210 (327)
|||++++++++|.+|||+| +|++|+.+...||+++..++++++..+.|++.++++|++.+.+..... +.+..
T Consensus 159 ~HAcr~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~ 237 (354)
T KOG0024|consen 159 VHACRRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKA 237 (354)
T ss_pred hhhhhhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhh
Confidence 9999999999999999999 899999999999999445677777899999999999999887654433 11111
Q ss_pred ---cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCC-----------CCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 211 ---EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPS-----------HPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 211 ---~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
..+|+.|||+|. .+.++.+++.+|.++..++-.. ....+..++.+...+|..+++++++|+++
T Consensus 238 ~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~ 317 (354)
T KOG0024|consen 238 LGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKID 317 (354)
T ss_pred ccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcC
Confidence 239999999994 3888999999999888875331 11123344455566899999999999999
Q ss_pred eeeCCCcccchhhHHHHHHHHHhCCC-CceEEEEeC
Q 020320 274 AQIDPTGPYKFKDVIEAFRYLETGRA-RGKVVISAF 308 (327)
Q Consensus 274 ~~~~~~~~~~~~~i~~a~~~~~~~~~-~gk~vv~~~ 308 (327)
+.+++|+.|++++..+||+.+.+++. .-|+++..+
T Consensus 318 ~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 318 VKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred chhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 99999999999999999999988875 358888765
No 3
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.4e-46 Score=334.53 Aligned_cols=296 Identities=39% Similarity=0.548 Sum_probs=254.1
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCC-CCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRP-LFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++.+++.++.+++.|+|.|.|++|||||||.++++|+.|....+|. .+..++|.++|.|++|+|+++|++|+.++
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 89999999999877999999999999999999999999999999999886 34567899999999999999999999999
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG 159 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g 159 (327)
+||||+.... .| ..|+|+||+.+|+++++++|+++++++|++++++++|||+++. ..++++|++|||+||+|
T Consensus 81 ~GdrV~~~~~---~~----~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaG 153 (326)
T COG0604 81 VGDRVAALGG---VG----RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAG 153 (326)
T ss_pred CCCEEEEccC---CC----CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCc
Confidence 9999998740 00 4799999999999999999999999999999999999999996 58899999999999999
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK 231 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~ 231 (327)
++|++++|+||++ |+.+++++.++++.++++++|+|+++++++.++.+.. +++|+++|++|.. ...+.+++
T Consensus 154 gVG~~aiQlAk~~-G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~ 232 (326)
T COG0604 154 GVGSAAIQLAKAL-GATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA 232 (326)
T ss_pred hHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence 9999999999999 7788888888888889999999999998888777754 3799999999954 66899999
Q ss_pred CCCcEEEeeCCCC-CCc----------e--eeEE-eecC-----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320 232 DNAPIVDITWPPS-HPR----------A--IYSS-LTVS-----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR 292 (327)
Q Consensus 232 ~~g~~v~~g~~~~-~~~----------~--~~~~-~~~~-----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~ 292 (327)
++|+++.+|.... ... . .... .... .+.++++.+++.+|++++.. ..+||+++..++..
T Consensus 233 ~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i--~~~~~l~e~~~a~a 310 (326)
T COG0604 233 PGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVI--DRVYPLAEAPAAAA 310 (326)
T ss_pred cCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCccee--ccEechhhhHHHHH
Confidence 9999999987552 110 0 0011 1112 46788899999999999875 48999999766665
Q ss_pred HHHh-CCCCceEEEEe
Q 020320 293 YLET-GRARGKVVISA 307 (327)
Q Consensus 293 ~~~~-~~~~gk~vv~~ 307 (327)
.... ++..||+|+++
T Consensus 311 ~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 311 HLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHcccCCcceEEEeC
Confidence 4444 48889999874
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-46 Score=317.39 Aligned_cols=304 Identities=28% Similarity=0.366 Sum_probs=254.7
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
|+++|.+..++...++++++++.|+++++||+|+++|+|||++|+|.+.|.++..++|.++|||.+|+|+++|++|+.++
T Consensus 9 k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~~~k 88 (360)
T KOG0023|consen 9 KQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVTGFK 88 (360)
T ss_pred hhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCccccc
Confidence 46789998888766688899999999999999999999999999999999998899999999999999999999999999
Q ss_pred CCCEEE-------------Eeccccccc------------CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHH
Q 020320 81 TGDEVY-------------GNIQDFNAE------------GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ 135 (327)
Q Consensus 81 ~Gd~V~-------------~~~~~~~~~------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 135 (327)
+||||- |.....++| ++.-++|+|++|+++++.+++++|++++.+.||.+.++..
T Consensus 89 iGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGI 168 (360)
T KOG0023|consen 89 IGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGI 168 (360)
T ss_pred ccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcce
Confidence 999982 111223444 2445678899999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccHHHHHHcCCCEEEeCC-CCChhhhc-cC
Q 020320 136 TAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGADKVIDYR-KTKYEDIE-EK 212 (327)
Q Consensus 136 ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~~~~~~~g~~~v~~~~-~~~~~~~~-~~ 212 (327)
|+|.+|...++.||+++.|.| .|++|.+++|+||+| |.+++++.+++ +|.+..+.||+|..++.. +.+..+.+ ..
T Consensus 169 TvYspLk~~g~~pG~~vgI~G-lGGLGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 169 TVYSPLKRSGLGPGKWVGIVG-LGGLGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred EEeehhHHcCCCCCcEEEEec-CcccchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence 999999999999999999999 555999999999999 99999999877 567777889999988766 45555443 33
Q ss_pred ccEEEeCCC-----CchhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeee
Q 020320 213 FDVLYDTIG-----DCKNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQI 276 (327)
Q Consensus 213 ~d~v~d~~g-----~~~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 276 (327)
.|..++++- ..+.++.+++++|+++.+|.+...-. .+..+..-.....++++++.+.+.+.+++
T Consensus 247 ~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~~I 326 (360)
T KOG0023|consen 247 TDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKSPI 326 (360)
T ss_pred hcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcCce
Confidence 455555543 34788899999999999998763111 11122223467789999999999999874
Q ss_pred CCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320 277 DPTGPYKFKDVIEAFRYLETGRARGKVVISAFP 309 (327)
Q Consensus 277 ~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~ 309 (327)
+..+++++++||+.|.++...++.|+++..
T Consensus 327 ---E~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 327 ---ELVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred ---EEEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 889999999999999999999999998753
No 5
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=2.5e-47 Score=324.67 Aligned_cols=300 Identities=26% Similarity=0.320 Sum_probs=255.5
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
|+|+.++.++++| |+++++.+++|++|||+||+.++|+|+||.+..+|.+|.. +|.++|||++|+|++||++|++++
T Consensus 2 k~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vk 78 (366)
T COG1062 2 KTRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVK 78 (366)
T ss_pred CceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccC
Confidence 5788999888887 9999999999999999999999999999999999998877 999999999999999999999999
Q ss_pred CCCEEEEecc------------cccccC-------------c-----------CCCC--CceeeEEEeeccceecCCCCC
Q 020320 81 TGDEVYGNIQ------------DFNAEG-------------K-----------LKQL--GALAEFIVVEESLIAKKPKNI 122 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~-------------~-----------~~~~--g~~~~~~~v~~~~~~~~p~~~ 122 (327)
+||+|+.... ..+.|. + ...- ++|++|..+++.++++++++.
T Consensus 79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 9999986542 233331 0 0122 389999999999999999999
Q ss_pred CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320 123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID 200 (327)
Q Consensus 123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~ 200 (327)
+++.++++.++..|++.++ +.+++++|+++.|.| .|++|++++|-|+.. |+ ++|+++.+++|++++++||+++++|
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~a-gA~~IiAvD~~~~Kl~~A~~fGAT~~vn 236 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAA-GAGRIIAVDINPEKLELAKKFGATHFVN 236 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHc-CCceEEEEeCCHHHHHHHHhcCCceeec
Confidence 9999999999999999977 679999999999999 999999999999998 65 5666668999999999999999999
Q ss_pred CCCC-Chhhhc-----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCce------------eeEEee---cC
Q 020320 201 YRKT-KYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPRA------------IYSSLT---VS 256 (327)
Q Consensus 201 ~~~~-~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~~------------~~~~~~---~~ 256 (327)
.++. +..+.+ +++|.+||++|.. .+++.+..++|..+..|.+...... +..+.. .-
T Consensus 237 ~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p 316 (366)
T COG1062 237 PKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP 316 (366)
T ss_pred chhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence 8776 354433 4899999999965 7788999999999999876532211 111111 12
Q ss_pred HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 257 GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 257 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
+.++..+++++.+|+++...+.++.++|+|||+||+.|.+++.. |.||.
T Consensus 317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 47799999999999999999999999999999999999999987 44443
No 6
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=3.3e-43 Score=317.88 Aligned_cols=300 Identities=25% Similarity=0.354 Sum_probs=247.8
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||+++++.++. +++++.|.|.++++||+||+.++++|++|++.+.+.+. ...+|.++|||++|+|+++|+++++++
T Consensus 1 mka~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVFPGDRT---VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEEecCCc---eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 89999987655 99999999999999999999999999999998876542 233578999999999999999999999
Q ss_pred CCCEEEEecc------------cccccC------cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320 81 TGDEVYGNIQ------------DFNAEG------KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK 142 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~ 142 (327)
+||+|++... ..+.|. +....|+|++|+.++.+.++++|+++++++++.++.++.|||+++.
T Consensus 78 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~ 157 (339)
T cd08239 78 VGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALR 157 (339)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 9999987542 112221 1234689999999999999999999999999999999999999998
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hc--cCccEE
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED---IE--EKFDVL 216 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~--~~~d~v 216 (327)
..++++|++|+|+| +|++|++++++||++ |++ ++++.+++++++.++++|++++++.++.+... .. +++|++
T Consensus 158 ~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~v 235 (339)
T cd08239 158 RVGVSGRDTVLVVG-AGPVGLGALMLARAL-GAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVA 235 (339)
T ss_pred hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEE
Confidence 88899999999998 699999999999998 888 77777889999999999999999876544211 11 379999
Q ss_pred EeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCccc
Q 020320 217 YDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPY 282 (327)
Q Consensus 217 ~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 282 (327)
||++|.. ..++.+++++|+++.+|....... .+........+.++++++++++|++++.++.+++|
T Consensus 236 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~ 315 (339)
T cd08239 236 IECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVTHRF 315 (339)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEEEEe
Confidence 9999854 567899999999999886432111 11112223457899999999999998766678999
Q ss_pred chhhHHHHHHHHHhCCCCceEEEEe
Q 020320 283 KFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 283 ~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+++++++||+.+.++. .+|+|+++
T Consensus 316 ~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 316 GLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred cHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 9999999999988765 68999864
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=3.6e-43 Score=321.13 Aligned_cols=300 Identities=24% Similarity=0.305 Sum_probs=247.7
Q ss_pred ceeEEecccCC------CcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCC
Q 020320 2 QNAWYYEEYGP------KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTS 75 (327)
Q Consensus 2 ~~~~v~~~~~~------~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 75 (327)
||++++.++|. ++.++++++|.|.++++||+||+.+++||++|++.+.+.++ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 89999999875 36799999999999999999999999999999999988653 357899999999999999999
Q ss_pred CCCCCCCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceec
Q 020320 76 VTKFNTGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAK 117 (327)
Q Consensus 76 v~~~~~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~ 117 (327)
++++++||||++... ..+.|... ...|+|+||+.++++++++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 999999999986321 11222110 0127899999999999999
Q ss_pred CCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCC
Q 020320 118 KPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGA 195 (327)
Q Consensus 118 ~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~ 195 (327)
+|+++++++|+.++.++.|||+++ ...++++|++|+|.| +|++|++++++||.+ |+ ++++++.+++|+++++++|+
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~-G~~~Vi~~~~~~~r~~~a~~~Ga 237 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAA-GASQVVAVDLNEDKLALARELGA 237 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHHcCC
Confidence 999999999999988899999987 568899999999998 799999999999999 88 57777889999999999999
Q ss_pred CEEEeCCCCChhhhc-----cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-Cc------------eeeEEee
Q 020320 196 DKVIDYRKTKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-PR------------AIYSSLT 254 (327)
Q Consensus 196 ~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~~------------~~~~~~~ 254 (327)
+++++..+.++.+.+ .++|++||++|.. ..++.+++++|+++.+|..... .. .+..+..
T Consensus 238 ~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 317 (371)
T cd08281 238 TATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYM 317 (371)
T ss_pred ceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEec
Confidence 999987765544322 3699999999853 6778999999999999864311 10 1111111
Q ss_pred c---CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEE
Q 020320 255 V---SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVV 304 (327)
Q Consensus 255 ~---~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~v 304 (327)
. ..+.+.++++++++|++++.++++++|+++|+++||+.+.+++..+|+|
T Consensus 318 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 318 GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 1 2467889999999999987667789999999999999999998887765
No 8
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-43 Score=297.94 Aligned_cols=302 Identities=23% Similarity=0.269 Sum_probs=253.5
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
+||+.|.-+++.| |.++|+..++|+..||+||+.++++|+||.+.+.+..+...+|+++|||.+|+|+.+|++|++++
T Consensus 7 ~CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk 84 (375)
T KOG0022|consen 7 TCKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVK 84 (375)
T ss_pred EEeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccC
Confidence 5899999888887 99999999999999999999999999999999999888889999999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCcC-------------------------CCCC--ceeeEEEeeccceecCCCC
Q 020320 81 TGDEVYGNIQ------------DFNAEGKL-------------------------KQLG--ALAEFIVVEESLIAKKPKN 121 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~~-------------------------~~~g--~~~~~~~v~~~~~~~~p~~ 121 (327)
+||+|+.+.. ..|.|... ..-| +|+||.+++...+.++++.
T Consensus 85 ~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~ 164 (375)
T KOG0022|consen 85 PGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPS 164 (375)
T ss_pred CCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCC
Confidence 9999985532 22333110 1123 7999999999999999999
Q ss_pred CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe
Q 020320 122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID 200 (327)
Q Consensus 122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~ 200 (327)
.+++.++++.+++.|+|.|. +.+++++|+++.|.| .|++|+++++-||+.+..++|.++-+++++++++++|+++.+|
T Consensus 165 aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN 243 (375)
T KOG0022|consen 165 APLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN 243 (375)
T ss_pred CChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence 99999999999999999987 679999999999999 9999999999999995557777888999999999999999998
Q ss_pred CCCC--Chhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCCCce------eeEEe---------e
Q 020320 201 YRKT--KYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSHPRA------IYSSL---------T 254 (327)
Q Consensus 201 ~~~~--~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~~~~------~~~~~---------~ 254 (327)
..+. ...+.+ .|+|..|||+|.. .+++.+.+.+ |.-+.+|........ +.... .
T Consensus 244 p~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~ 323 (375)
T KOG0022|consen 244 PKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGF 323 (375)
T ss_pred hhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccc
Confidence 7732 122222 5899999999976 5666777777 999988875532211 11100 1
Q ss_pred cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 255 VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 255 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
-..+++..+++.+.+++++...++||.+||++|++||+.|.+++.. +.|+.
T Consensus 324 K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 324 KSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred cchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 2358899999999999999999999999999999999999999887 66654
No 9
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-42 Score=314.02 Aligned_cols=297 Identities=19% Similarity=0.271 Sum_probs=239.4
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhc-CCCC--CCCCCCcccccccEEEEEeCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLF--PSDFPAVPGCDMAGIVVAKGTSVT 77 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~-~~~~--~~~~p~~~G~e~~G~V~~vG~~v~ 77 (327)
+||+++++.++. +++++.|.| ++++||||||.+++||++|++.+. +.++ ...+|.++|||++|+|+++ +++
T Consensus 4 ~~~~~~~~~~~~---~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~ 77 (343)
T PRK09880 4 KTQSCVVAGKKD---VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS 77 (343)
T ss_pred cceEEEEecCCc---eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence 578999987777 999999987 689999999999999999999875 3322 2357899999999999999 788
Q ss_pred CCCCCCEEEEec------------ccccccCc-----C-----CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHH
Q 020320 78 KFNTGDEVYGNI------------QDFNAEGK-----L-----KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ 135 (327)
Q Consensus 78 ~~~~Gd~V~~~~------------~~~~~~~~-----~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 135 (327)
++++||||+... +..+.|.. . ..+|+|+||++++++.++++|++++++++++ ..++.
T Consensus 78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~~~ 156 (343)
T PRK09880 78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF-AEPLA 156 (343)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHh-hcHHH
Confidence 999999998642 11222321 0 2469999999999999999999999887653 44566
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc---c
Q 020320 136 TAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE---E 211 (327)
Q Consensus 136 ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~ 211 (327)
++|+++.+....++++|+|.| +|++|++++|+|+++ |+ ++++++++++++++++++|++++++.++.++.+.. .
T Consensus 157 ~a~~al~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~-G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g 234 (343)
T PRK09880 157 VAIHAAHQAGDLQGKRVFVSG-VGPIGCLIVAAVKTL-GAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKG 234 (343)
T ss_pred HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCC
Confidence 899999877777899999998 699999999999999 87 57777889999999999999999987765544322 3
Q ss_pred CccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeeeC
Q 020320 212 KFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQID 277 (327)
Q Consensus 212 ~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 277 (327)
++|++||++|.. ..++.+++++|+++.+|....... .+..+. ...+.++++++++++|++++.++
T Consensus 235 ~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~-~~~~~~~~~~~l~~~g~i~~~~~ 313 (343)
T PRK09880 235 YFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSF-RFTEEFNTAVSWLANGVINPLPL 313 (343)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEe-eccccHHHHHHHHHcCCCCchhh
Confidence 599999999953 678899999999999986432110 111111 22467899999999999987666
Q ss_pred CCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 278 PTGPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 278 ~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
.+++|+++|+++||+.+.++...+|+++.+
T Consensus 314 i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 314 LSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred eEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 789999999999999998888789999864
No 10
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.5e-42 Score=282.52 Aligned_cols=298 Identities=32% Similarity=0.444 Sum_probs=263.1
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
.|-+++++.|..+++++++.|.|+|.++|++||..|+|+|.-|.....|-|.....|+++|-|.+|.|+.+|++++++++
T Consensus 9 ~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkv 88 (336)
T KOG1197|consen 9 LKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKV 88 (336)
T ss_pred heEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcccccc
Confidence 36688999999999999999999999999999999999999999999999866778999999999999999999999999
Q ss_pred CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCch
Q 020320 82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGG 160 (327)
Q Consensus 82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~ 160 (327)
||||.-+. ..|.|+++..+|...+.++|+.+++.+|+.+.+.++|||.-++ -.++++|++|||+.|+|+
T Consensus 89 GDrVayl~----------~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGG 158 (336)
T KOG1197|consen 89 GDRVAYLN----------PFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGG 158 (336)
T ss_pred ccEEEEec----------cchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccc
Confidence 99998875 4799999999999999999999999999999999999999886 589999999999999999
Q ss_pred HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC--chhhhhhhcC
Q 020320 161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD--CKNSFVVAKD 232 (327)
Q Consensus 161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~--~~~~~~~l~~ 232 (327)
+|++++|+++.. |+.+|.+..+.++.+.+++.|++|.++.+.+++.+.. .|+|+++|++|. ....+.+|++
T Consensus 159 VGlll~Ql~ra~-~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~ 237 (336)
T KOG1197|consen 159 VGLLLCQLLRAV-GAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKP 237 (336)
T ss_pred HHHHHHHHHHhc-CcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhcc
Confidence 999999999999 9999999999999999999999999999998887754 589999999994 3778899999
Q ss_pred CCcEEEeeCCCCCCceeeE------Eeec---------C-H----HHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320 233 NAPIVDITWPPSHPRAIYS------SLTV---------S-G----EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR 292 (327)
Q Consensus 233 ~g~~v~~g~~~~~~~~~~~------~~~~---------~-~----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~ 292 (327)
.|.++.+|........+.. .+.+ . . ....+++.++.+|.+++.+ -++||++++.+|..
T Consensus 238 ~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I--~~~ypls~vadA~~ 315 (336)
T KOG1197|consen 238 MGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHI--DHVYPLSKVADAHA 315 (336)
T ss_pred CceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceee--eeecchHHHHHHHH
Confidence 9999999865432211111 0000 0 1 2346788899999999865 68999999999999
Q ss_pred HHHhCCCCceEEEEeCCCCC
Q 020320 293 YLETGRARGKVVISAFPYTE 312 (327)
Q Consensus 293 ~~~~~~~~gk~vv~~~~~~~ 312 (327)
++++....||+++.++++++
T Consensus 316 diesrktvGkvlLlp~~~~~ 335 (336)
T KOG1197|consen 316 DIESRKTVGKVLLLPGPEKE 335 (336)
T ss_pred HHHhhhccceEEEeCCcccc
Confidence 99999999999999987764
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=3.1e-42 Score=313.56 Aligned_cols=300 Identities=24% Similarity=0.299 Sum_probs=246.3
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
|||++++++++.+ +++++.|.|.++++||+||+.++++|++|++.+.+.++ ..+|.++|||++|+|+++|+++++++
T Consensus 1 ~mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 1 TVRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred CcEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccC
Confidence 7999999999865 89999999999999999999999999999999887643 34789999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCcC------------------CCCCceeeEEEeeccceecCCCCCCHHhhccc
Q 020320 81 TGDEVYGNIQ------------DFNAEGKL------------------KQLGALAEFIVVEESLIAKKPKNISFEEAASL 130 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~~------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~ 130 (327)
+||+|++... ..+.|... ...|+|+||+.+++++++++|+++++++++.+
T Consensus 78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l 157 (358)
T TIGR03451 78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL 157 (358)
T ss_pred CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence 9999986321 11222110 12589999999999999999999999999998
Q ss_pred chHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320 131 PLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED 208 (327)
Q Consensus 131 ~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 208 (327)
++++.++|+++ ...++++|++|+|+| +|++|++++++||.+ |++ ++++++++++++.++++|++++++..+.++..
T Consensus 158 ~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~-G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~ 235 (358)
T TIGR03451 158 GCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALA-GASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVE 235 (358)
T ss_pred cccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHH
Confidence 88888999887 467899999999998 799999999999999 885 77777899999999999999999877655543
Q ss_pred hc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-C--c----------eeeEEee---cCHHHHHHH
Q 020320 209 IE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-P--R----------AIYSSLT---VSGEILEKL 263 (327)
Q Consensus 209 ~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~--~----------~~~~~~~---~~~~~~~~~ 263 (327)
.+ +++|+++|++|.. ..++.+++++|+++.+|..... + . .+...+. ...+.++.+
T Consensus 236 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 315 (358)
T TIGR03451 236 AIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPML 315 (358)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHH
Confidence 22 3699999999853 6778899999999999865321 0 0 0111111 135678999
Q ss_pred HhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 264 RPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 264 ~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
++++++|++++..+++++|+++|+++||+.+.+++.. |++++
T Consensus 316 ~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 316 VDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 9999999998766678999999999999999887765 77665
No 12
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=5.8e-42 Score=312.65 Aligned_cols=302 Identities=24% Similarity=0.281 Sum_probs=245.4
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
+||++++..++.. ++++++|.|+++++||+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|+++++++
T Consensus 1 ~~~a~~~~~~~~~--l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~ 78 (368)
T TIGR02818 1 KSRAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVK 78 (368)
T ss_pred CceEEEEecCCCC--eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCC
Confidence 5899998877643 99999999999999999999999999999999988765556799999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCcCC--------------------------CCCceeeEEEeeccceecCCCCC
Q 020320 81 TGDEVYGNIQ------------DFNAEGKLK--------------------------QLGALAEFIVVEESLIAKKPKNI 122 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~~~--------------------------~~g~~~~~~~v~~~~~~~~p~~~ 122 (327)
+||||.+... ..+.|.... ..|+|+||++++.++++++|+++
T Consensus 79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 9999987531 122232100 13799999999999999999999
Q ss_pred CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320 123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID 200 (327)
Q Consensus 123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~ 200 (327)
++++++.++.++.++|+++ +..++++|++|+|+| +|++|++++++||++ |+ ++++++.++++++.++++|++++++
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~-G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~ 236 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATDCVN 236 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCeEEc
Confidence 9999999998999999998 568899999999998 799999999999999 87 6888888999999999999999987
Q ss_pred CCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCC-Cc-----ee------eEEee---
Q 020320 201 YRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSH-PR-----AI------YSSLT--- 254 (327)
Q Consensus 201 ~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~-~~-----~~------~~~~~--- 254 (327)
..+ .++.... .++|++||++|.. ..++.+++++ |+++.+|..... +. .. ..+..
T Consensus 237 ~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 316 (368)
T TIGR02818 237 PNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGV 316 (368)
T ss_pred ccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCC
Confidence 653 2222211 3799999999853 6788999886 999999864311 11 00 11111
Q ss_pred cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 255 VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 255 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
.....+.++++++++|++++..++++.|+|+|+++||+.+.+++. .|+++.+
T Consensus 317 ~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 317 KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 124578999999999999876677899999999999999987654 5888764
No 13
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.4e-41 Score=305.38 Aligned_cols=293 Identities=23% Similarity=0.246 Sum_probs=241.1
Q ss_pred eEEecccCCC--cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 4 AWYYEEYGPK--EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 4 ~~v~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
++.+.++|.+ ..+++++.|.|.++++||+||+.++++|++|++.+.|.++...+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence 3567777765 46999999999999999999999999999999999887654445789999999999999999999999
Q ss_pred CCEEEEec-----c--------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320 82 GDEVYGNI-----Q--------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT 143 (327)
Q Consensus 82 Gd~V~~~~-----~--------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~ 143 (327)
||+|+... . ..+.|. +....|+|++|+.++.++++++|+++++++++.++.++.|||+++..
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~ 160 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR 160 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence 99997421 1 122221 12246899999999999999999999999999888899999999988
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC-
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD- 222 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~- 222 (327)
.++++|++|+|+| +|++|++++++|+.+ |+++++++++++++++++++|++++++..... .+++|+++++.+.
T Consensus 161 ~~~~~g~~VlV~G-~g~iG~~a~~~a~~~-G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~~d~~i~~~~~~ 234 (329)
T TIGR02822 161 ASLPPGGRLGLYG-FGGSAHLTAQVALAQ-GATVHVMTRGAAARRLALALGAASAGGAYDTP----PEPLDAAILFAPAG 234 (329)
T ss_pred cCCCCCCEEEEEc-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHhCCceeccccccC----cccceEEEECCCcH
Confidence 8999999999999 599999999999998 88888888999999999999999998743221 2368888887763
Q ss_pred --chhhhhhhcCCCcEEEeeCCCC-C-Cc----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320 223 --CKNSFVVAKDNAPIVDITWPPS-H-PR----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI 288 (327)
Q Consensus 223 --~~~~~~~l~~~g~~v~~g~~~~-~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~ 288 (327)
...++++++++|+++.+|.... . +. .+..........+.++++++++|++++. +++|+++|++
T Consensus 235 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i---~~~~~l~~~~ 311 (329)
T TIGR02822 235 GLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVT---THTYPLSEAD 311 (329)
T ss_pred HHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeE---EEEEeHHHHH
Confidence 3778899999999999986421 1 11 1111222345778999999999999752 6899999999
Q ss_pred HHHHHHHhCCCCceEEE
Q 020320 289 EAFRYLETGRARGKVVI 305 (327)
Q Consensus 289 ~a~~~~~~~~~~gk~vv 305 (327)
+||+.+.+++..||+|+
T Consensus 312 ~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 312 RALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHcCCCceEEEe
Confidence 99999999999999987
No 14
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.4e-41 Score=308.93 Aligned_cols=301 Identities=23% Similarity=0.312 Sum_probs=240.8
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++.+...+..+.+++.+++.|.++++||+|||.+++||++|++.+.+.++...+|.++|||++|+|+++|++++++++
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~v 90 (360)
T PLN02586 11 QKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKE 90 (360)
T ss_pred hheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCccCC
Confidence 56665555555566899999999999999999999999999999998876654567899999999999999999999999
Q ss_pred CCEEEEe-----cc--------cccccCc------------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHH
Q 020320 82 GDEVYGN-----IQ--------DFNAEGK------------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQT 136 (327)
Q Consensus 82 Gd~V~~~-----~~--------~~~~~~~------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 136 (327)
||+|+.. ++ .++.|.. ...+|+|+||++++++.++++|+++++++++.+++++.|
T Consensus 91 GdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t 170 (360)
T PLN02586 91 GDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGIT 170 (360)
T ss_pred CCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHH
Confidence 9999742 11 1223321 123699999999999999999999999999999999999
Q ss_pred HHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHHHHHcCCCEEEeCCCC-ChhhhccCc
Q 020320 137 AIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKVIDYRKT-KYEDIEEKF 213 (327)
Q Consensus 137 a~~~l~~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~~~~~g~~~v~~~~~~-~~~~~~~~~ 213 (327)
+|+++.. ...++|++|+|.| +|++|++++|+||.+ |+++++++.++++ .+.++++|++++++..+. .......++
T Consensus 171 a~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~ 248 (360)
T PLN02586 171 VYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAF-GLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTM 248 (360)
T ss_pred HHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCC
Confidence 9999864 5578999999987 799999999999999 8888887766655 456688999998875542 222223479
Q ss_pred cEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-Cc----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320 214 DVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-PR----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 214 d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 279 (327)
|++||++|.. ..++++++++|+++.+|..... .. .+..+.......++++++++++|++++..
T Consensus 249 D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~--- 325 (360)
T PLN02586 249 DYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADI--- 325 (360)
T ss_pred CEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcE---
Confidence 9999999853 5688999999999999854211 10 01111122346799999999999998643
Q ss_pred cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 280 GPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
++|+++|+++||+.+.+++..+|+++.+
T Consensus 326 ~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 326 ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 6899999999999999998889999987
No 15
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2e-41 Score=310.50 Aligned_cols=302 Identities=21% Similarity=0.289 Sum_probs=245.1
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF 79 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 79 (327)
+||++++..+++. +.+++.|.|.++++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++++
T Consensus 10 ~mka~~~~~~~~~--~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~ 87 (381)
T PLN02740 10 TCKAAVAWGPGEP--LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDL 87 (381)
T ss_pred eeEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcC
Confidence 5999999887743 88899999999999999999999999999999988653 33578999999999999999999999
Q ss_pred CCCCEEEEecc------------cccccCcCC-----------------------------CCCceeeEEEeeccceecC
Q 020320 80 NTGDEVYGNIQ------------DFNAEGKLK-----------------------------QLGALAEFIVVEESLIAKK 118 (327)
Q Consensus 80 ~~Gd~V~~~~~------------~~~~~~~~~-----------------------------~~g~~~~~~~v~~~~~~~~ 118 (327)
++||||++... ..+.|.... ..|+|+||++++..+++++
T Consensus 88 ~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~i 167 (381)
T PLN02740 88 KAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKI 167 (381)
T ss_pred CCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEEC
Confidence 99999987531 122232110 2589999999999999999
Q ss_pred CCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCC
Q 020320 119 PKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGAD 196 (327)
Q Consensus 119 p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~ 196 (327)
|+++++++++.++.++.|||+++ +..++++|++|+|+| +|++|++++++||.+ |+ +++++++++++++.++++|++
T Consensus 168 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~-G~~~Vi~~~~~~~r~~~a~~~Ga~ 245 (381)
T PLN02740 168 DPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARAR-GASKIIGVDINPEKFEKGKEMGIT 245 (381)
T ss_pred CCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCCcEEEEcCChHHHHHHHHcCCc
Confidence 99999999999888899999987 568899999999998 799999999999999 87 577888899999999999999
Q ss_pred EEEeCCCCC--hhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCCC------------ceeeEEe
Q 020320 197 KVIDYRKTK--YEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSHP------------RAIYSSL 253 (327)
Q Consensus 197 ~v~~~~~~~--~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~~------------~~~~~~~ 253 (327)
++++..+.+ +.+.. +++|++||++|.. ..++.+++++ |+++.+|...... ..+..+.
T Consensus 246 ~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 325 (381)
T PLN02740 246 DFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSV 325 (381)
T ss_pred EEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEe
Confidence 998866532 33221 2699999999953 6778889886 9999988653211 0011111
Q ss_pred e--c-CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 254 T--V-SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 254 ~--~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
. . ....+.++++++.+|++++..+.+++|+++|+++||+.+.+++. .|+++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 326 FGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred cCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 1 1 13568999999999999876667899999999999999987765 4888763
No 16
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=6.2e-41 Score=306.06 Aligned_cols=301 Identities=23% Similarity=0.281 Sum_probs=244.8
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
+||++++..++.. +++++.|.|.++++||+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|+++++++
T Consensus 2 ~~~a~~~~~~~~~--~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 79 (368)
T cd08300 2 TCKAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVK 79 (368)
T ss_pred cceEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCC
Confidence 6899998776543 89999999999999999999999999999999888765556899999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCC
Q 020320 81 TGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNI 122 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~ 122 (327)
+||+|++... ..+.|... ...|+|+||+.++.+.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 80 PGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 9999987521 11222110 024689999999999999999999
Q ss_pred CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320 123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID 200 (327)
Q Consensus 123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~ 200 (327)
++++++.++.++.++|+++ ....+++|++|+|+| +|++|++++++||.+ |+ +++++++++++++.++++|++++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~-G~~~vi~~~~~~~~~~~~~~lGa~~~i~ 237 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATDCVN 237 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCEEEc
Confidence 9999999988889999987 468899999999998 799999999999999 88 5778889999999999999999998
Q ss_pred CCCC--Chhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCC-CCc-----ee------eEEe---e
Q 020320 201 YRKT--KYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPS-HPR-----AI------YSSL---T 254 (327)
Q Consensus 201 ~~~~--~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~-~~~-----~~------~~~~---~ 254 (327)
.++. ++.... .++|++||++|.. ..++.+++++ |+++.+|.... ... .. .... .
T Consensus 238 ~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (368)
T cd08300 238 PKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGW 317 (368)
T ss_pred ccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEeccc
Confidence 7653 233321 3799999999853 6788999886 99999986531 110 00 1111 1
Q ss_pred cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 255 VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 255 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
...+.+.++++++++|++++.++.+++|+|+|+++||+.+.+++. .|++++
T Consensus 318 ~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 318 KSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred CcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 135678999999999999876567899999999999999987765 488764
No 17
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=5.8e-41 Score=305.92 Aligned_cols=300 Identities=23% Similarity=0.311 Sum_probs=240.9
Q ss_pred eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTG 82 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 82 (327)
|++.+...+.++.+++.+.+.|.++++||+||+.+++||++|++.+.|.++...+|.++|||++|+|+++|++++++++|
T Consensus 6 ~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vG 85 (375)
T PLN02178 6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEG 85 (375)
T ss_pred eeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCC
Confidence 55565556665668999999999999999999999999999999998866444578999999999999999999999999
Q ss_pred CEEEEe-----cc--------cccccCcC------------CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHH
Q 020320 83 DEVYGN-----IQ--------DFNAEGKL------------KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA 137 (327)
Q Consensus 83 d~V~~~-----~~--------~~~~~~~~------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta 137 (327)
|||... ++ .++.|... ...|+|+||++++++.++++|+++++++++.++++..|+
T Consensus 86 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta 165 (375)
T PLN02178 86 DRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV 165 (375)
T ss_pred CEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHH
Confidence 999742 21 12333211 126899999999999999999999999999998889999
Q ss_pred HHHHHhcC--CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHHHHcCCCEEEeCCCC-ChhhhccCc
Q 020320 138 IEGFKTAG--FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKT-KYEDIEEKF 213 (327)
Q Consensus 138 ~~~l~~~~--~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~~~~g~~~v~~~~~~-~~~~~~~~~ 213 (327)
|+++.... .++|++|+|.| +|++|++++++||++ |+++++++.+++ +.+.++++|++++++..+. .......++
T Consensus 166 ~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~ 243 (375)
T PLN02178 166 YSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAF-GLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTM 243 (375)
T ss_pred HHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHc-CCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCC
Confidence 99986543 36899999998 799999999999999 998888876654 4778889999999875432 122222479
Q ss_pred cEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-C----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320 214 DVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-P----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 214 d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 279 (327)
|++||++|.. ..++.+++++|+++.+|..... . ..+..+.....+.+.++++++++|++++..
T Consensus 244 D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i--- 320 (375)
T PLN02178 244 DFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDI--- 320 (375)
T ss_pred cEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccE---
Confidence 9999999853 6788999999999999864311 1 011122223457899999999999998653
Q ss_pred cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 280 GPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+.|+|+|+++||+.+.+++..||+++.+
T Consensus 321 ~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 321 ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 6799999999999999998889999998
No 18
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=8.2e-41 Score=305.53 Aligned_cols=300 Identities=21% Similarity=0.269 Sum_probs=244.5
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
|||++++..++.. +++++.|.|+++++||+||+.++++|++|++.+.+..+...+|.++|||++|+|+++|+++++++
T Consensus 2 ~~ka~~~~~~~~~--~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (369)
T cd08301 2 TCKAAVAWEAGKP--LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLK 79 (369)
T ss_pred ccEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccc
Confidence 7999999877654 99999999999999999999999999999999988765566799999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCcCC---------------------------CCCceeeEEEeeccceecCCCC
Q 020320 81 TGDEVYGNIQ------------DFNAEGKLK---------------------------QLGALAEFIVVEESLIAKKPKN 121 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~~~---------------------------~~g~~~~~~~v~~~~~~~~p~~ 121 (327)
+||||++... ..+.|.... ..|+|+||++++..+++++|++
T Consensus 80 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 80 PGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred cCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 9999987521 122222110 2478999999999999999999
Q ss_pred CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEE
Q 020320 122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVI 199 (327)
Q Consensus 122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~ 199 (327)
++++++++++.++.++|+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +++++++++++.++++++|++.++
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~-G~~~vi~~~~~~~~~~~~~~~Ga~~~i 237 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIR-GASRIIGVDLNPSKFEQAKKFGVTEFV 237 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence 99999999988889999987 458899999999998 699999999999998 87 688888899999999999999888
Q ss_pred eCCC--CChhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCC-C--c---eee------EEe--e
Q 020320 200 DYRK--TKYEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSH-P--R---AIY------SSL--T 254 (327)
Q Consensus 200 ~~~~--~~~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~-~--~---~~~------~~~--~ 254 (327)
+..+ ..+.+.+ +++|++||++|.. ..++.+++++ |+++.+|..... . . .+. ... .
T Consensus 238 ~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 317 (369)
T cd08301 238 NPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGG 317 (369)
T ss_pred cccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCC
Confidence 7654 2232211 3699999999853 6778999996 999998864311 1 0 011 111 1
Q ss_pred c-CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 255 V-SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 255 ~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
. ....++++++++.+|++++..+++++|+++|+++||+.+.+++.. |+++
T Consensus 318 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 318 YKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred CChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 1 235788999999999998766678999999999999999888765 7776
No 19
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=6.7e-41 Score=306.96 Aligned_cols=299 Identities=20% Similarity=0.227 Sum_probs=232.1
Q ss_pred ceeEEecccCCCcceEEeeccCCCCC-------CCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQ-------HDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGT 74 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~-------~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~ 74 (327)
||+++++.+++ ++++++|.|.++ +|||||||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|+
T Consensus 3 mka~v~~~~~~---~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~ 78 (393)
T TIGR02819 3 NRGVVYLGPGK---VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGR 78 (393)
T ss_pred ceEEEEecCCc---eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcC
Confidence 89999988876 999999999874 68999999999999999999987643 34689999999999999999
Q ss_pred CCCCCCCCCEEEEec------------ccccccCcC---------------CCCCceeeEEEeecc--ceecCCCCCCH-
Q 020320 75 SVTKFNTGDEVYGNI------------QDFNAEGKL---------------KQLGALAEFIVVEES--LIAKKPKNISF- 124 (327)
Q Consensus 75 ~v~~~~~Gd~V~~~~------------~~~~~~~~~---------------~~~g~~~~~~~v~~~--~~~~~p~~~~~- 124 (327)
+|+++++||||.... +.++.|... ..+|+|+||+.++.. +++++|++++.
T Consensus 79 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~ 158 (393)
T TIGR02819 79 DVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQAL 158 (393)
T ss_pred ccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCccccc
Confidence 999999999997532 123334321 135999999999963 79999988653
Q ss_pred ---HhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHHHHcCCCEEEe
Q 020320 125 ---EEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVID 200 (327)
Q Consensus 125 ---~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~~~~g~~~v~~ 200 (327)
..++.+...+.++|+++.+.+++++++|+|.| +|++|++++++|+.+ |+++++++ .+++|+++++++|++.+..
T Consensus 159 ~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~-Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~ 236 (393)
T TIGR02819 159 EKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG-AGPVGLAAAASAQLL-GAAVVIVGDLNPARLAQARSFGCETVDL 236 (393)
T ss_pred ccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHcCCeEEec
Confidence 34566677888999999888899999999976 899999999999999 88866554 6778999999999985443
Q ss_pred CCCCChhhh----c--cCccEEEeCCCC-----------------chhhhhhhcCCCcEEEeeCCCC-CCce--------
Q 020320 201 YRKTKYEDI----E--EKFDVLYDTIGD-----------------CKNSFVVAKDNAPIVDITWPPS-HPRA-------- 248 (327)
Q Consensus 201 ~~~~~~~~~----~--~~~d~v~d~~g~-----------------~~~~~~~l~~~g~~v~~g~~~~-~~~~-------- 248 (327)
....++.+. . +++|++||++|. ...++.+++++|+++.+|.+.. .+..
T Consensus 237 ~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~ 316 (393)
T TIGR02819 237 SKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTG 316 (393)
T ss_pred CCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccccc
Confidence 333333321 1 369999999994 3567899999999999997531 1100
Q ss_pred ---eeEE------e------ecCHHHHHHHHhHHHCCCceeeeCCC-cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 249 ---IYSS------L------TVSGEILEKLRPFIESGKLKAQIDPT-GPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 249 ---~~~~------~------~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+... . ....+.+.++++++++|++++..+.+ +.|+++|+++||+.+.+++. .|+++.+
T Consensus 317 ~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~ 390 (393)
T TIGR02819 317 SLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDP 390 (393)
T ss_pred ccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeC
Confidence 0000 0 00012346899999999998765555 78999999999999987754 7999986
No 20
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.4e-40 Score=302.69 Aligned_cols=300 Identities=22% Similarity=0.266 Sum_probs=242.1
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
+||++++..+++ .++++++|.|.++++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+++++++
T Consensus 12 ~mka~~~~~~~~--~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~ 86 (378)
T PLN02827 12 TCRAAVAWGAGE--ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFE 86 (378)
T ss_pred eeEEEEEecCCC--CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccC
Confidence 589999977654 38999999999999999999999999999999887642 4688999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCC
Q 020320 81 TGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNI 122 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~ 122 (327)
+||+|++... ..+.|... ...|+|+||+.+++.+++++|+++
T Consensus 87 ~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 87 KGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 9999987632 12223211 024899999999999999999999
Q ss_pred CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEe
Q 020320 123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVID 200 (327)
Q Consensus 123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~ 200 (327)
++++++.+++++.++|+++ +..++++|++|+|+| +|++|++++++|+++ |++ +++++.++++.+.++++|++++++
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~-G~~~vi~~~~~~~~~~~a~~lGa~~~i~ 244 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLR-GASQIIGVDINPEKAEKAKTFGVTDFIN 244 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcEEEc
Confidence 9999998888888899877 458899999999998 799999999999999 876 555557899999999999999987
Q ss_pred CCCC--Chhhhc-----cCccEEEeCCCC---chhhhhhhcCC-CcEEEeeCCCCCCc------e------eeEEee--c
Q 020320 201 YRKT--KYEDIE-----EKFDVLYDTIGD---CKNSFVVAKDN-APIVDITWPPSHPR------A------IYSSLT--V 255 (327)
Q Consensus 201 ~~~~--~~~~~~-----~~~d~v~d~~g~---~~~~~~~l~~~-g~~v~~g~~~~~~~------~------~~~~~~--~ 255 (327)
.++. ++...+ .++|++||++|. ...++..++++ |+++.+|.+..... . +..... .
T Consensus 245 ~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
T PLN02827 245 PNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGW 324 (378)
T ss_pred ccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCC
Confidence 6642 332221 379999999995 36788999998 99999886532111 0 111111 1
Q ss_pred -CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320 256 -SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF 308 (327)
Q Consensus 256 -~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~ 308 (327)
....++.+++++++|++++..+.+++|+++++++||+.+.+++. .|+||+++
T Consensus 325 ~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 325 KPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred chhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 23568899999999999985566899999999999999988876 59999875
No 21
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2.2e-40 Score=295.05 Aligned_cols=287 Identities=21% Similarity=0.220 Sum_probs=225.0
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeC-hHhHhhhcCCCCC---CCCCCcccccccEEEEEeCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALN-PIDSKRRQRPLFP---SDFPAVPGCDMAGIVVAKGTSV 76 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~-~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v 76 (327)
|||++++..++. +++.+.|.|.++++||+||+.+++|| ++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 ~~ka~~~~~~~~---l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v 77 (308)
T TIGR01202 1 KTQAIVLSGPNQ---IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT 77 (308)
T ss_pred CceEEEEeCCCe---EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC
Confidence 799999987665 99999999999999999999999996 7999988887532 3579999999999999999998
Q ss_pred CCCCCCCEEEEecccccccCc--CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEE
Q 020320 77 TKFNTGDEVYGNIQDFNAEGK--LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFI 154 (327)
Q Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~--~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI 154 (327)
++++||||+.... .|.. ....|+|+||+.++++.++++|++++++. +++. ...|||+++.... .++++++|
T Consensus 78 -~~~vGdrV~~~~~---~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~-~~~~~vlV 150 (308)
T TIGR01202 78 -GFRPGDRVFVPGS---NCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAE-VKVLPDLI 150 (308)
T ss_pred -CCCCCCEEEEeCc---cccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcc-cCCCcEEE
Confidence 6999999987432 2221 12369999999999999999999998865 4443 3578999997643 36889999
Q ss_pred EcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---hhhhhhh
Q 020320 155 VGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---KNSFVVA 230 (327)
Q Consensus 155 ~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~l 230 (327)
+| +|++|++++|+||++ |+++++++ .++++++.+..+ ++++..+. ...++|++||++|.. +.++.++
T Consensus 151 ~G-~G~vG~~a~q~ak~~-G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----~~~g~Dvvid~~G~~~~~~~~~~~l 221 (308)
T TIGR01202 151 VG-HGTLGRLLARLTKAA-GGSPPAVWETNPRRRDGATGY---EVLDPEKD----PRRDYRAIYDASGDPSLIDTLVRRL 221 (308)
T ss_pred EC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHhhhhc---cccChhhc----cCCCCCEEEECCCCHHHHHHHHHhh
Confidence 98 899999999999998 88866554 555666555443 44543221 234799999999953 7789999
Q ss_pred cCCCcEEEeeCCCCC-Cc----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCC
Q 020320 231 KDNAPIVDITWPPSH-PR----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRA 299 (327)
Q Consensus 231 ~~~g~~v~~g~~~~~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~ 299 (327)
+++|+++.+|..... .. .+..+.....++++++++++++|++++.++.++.|+++|+++||+.+.++..
T Consensus 222 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~ 301 (308)
T TIGR01202 222 AKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPD 301 (308)
T ss_pred hcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcC
Confidence 999999999864321 10 1111222345789999999999999987678999999999999998877766
Q ss_pred CceEEEE
Q 020320 300 RGKVVIS 306 (327)
Q Consensus 300 ~gk~vv~ 306 (327)
.+|++++
T Consensus 302 ~~Kv~~~ 308 (308)
T TIGR01202 302 CLKMILD 308 (308)
T ss_pred ceEEEeC
Confidence 7898874
No 22
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.2e-39 Score=296.19 Aligned_cols=300 Identities=23% Similarity=0.285 Sum_probs=242.5
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
++++++.++++. +++++++.|+++++||+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|++++++++
T Consensus 10 ~~~~~~~~~~~~--~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 10 TTGWAARDPSGH--LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred EEEEEEecCCCC--ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 789999988864 999999999999999999999999999999998876644457899999999999999999999999
Q ss_pred CCEEEEe-----cc--------cccccCc------------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHH
Q 020320 82 GDEVYGN-----IQ--------DFNAEGK------------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQT 136 (327)
Q Consensus 82 Gd~V~~~-----~~--------~~~~~~~------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 136 (327)
||+|+.. ++ ..+.|.. ....|+|++|+.++.+.++++|+++++++++.++.++.|
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 167 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVT 167 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHH
Confidence 9999742 11 1222321 123699999999999999999999999999999999999
Q ss_pred HHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCC-hhhhccCc
Q 020320 137 AIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTK-YEDIEEKF 213 (327)
Q Consensus 137 a~~~l~~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~-~~~~~~~~ 213 (327)
||+++.. ...++|++++|+| +|++|++++++||++ |+++++++.+++++..+ +++|++++++..+.. ......++
T Consensus 168 a~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~-G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~ 245 (357)
T PLN02514 168 VYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSL 245 (357)
T ss_pred HHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCC
Confidence 9999965 4557999999997 799999999999999 88888888777666544 679998877654321 22223579
Q ss_pred cEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320 214 DVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 214 d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 279 (327)
|++||++|. ...++.+++++|+++.+|...... ..+..+......+++++++++++|++++. .
T Consensus 246 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~---i 322 (357)
T PLN02514 246 DYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSM---I 322 (357)
T ss_pred cEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCc---E
Confidence 999999984 367889999999999998643111 01112222344679999999999998753 3
Q ss_pred cccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320 280 GPYKFKDVIEAFRYLETGRARGKVVISAF 308 (327)
Q Consensus 280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~~ 308 (327)
+.|+++|+.+||+.+.+++..+|+++.+.
T Consensus 323 ~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 323 EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 67999999999999999988899999874
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-39 Score=294.63 Aligned_cols=300 Identities=23% Similarity=0.316 Sum_probs=239.2
Q ss_pred ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||+++++.++. +++.+.|.|.+ +++||+||+.++++|++|++.+.+. ....+|.++|||++|+|+++|+++++++
T Consensus 1 Mka~~~~~~~~---~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~-~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKN-GAHYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeCCCc---eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCC-CCCCCCcccccceEEEEEEeCCCCCCCC
Confidence 89999998765 99999999998 5999999999999999999754221 1123688999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320 81 TGDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT 143 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~ 143 (327)
+||+|++... .++.|.. ....|+|++|++++.++++++|+++++++++++. .+.++|+++..
T Consensus 77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~~~ 155 (347)
T PRK10309 77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHL 155 (347)
T ss_pred CCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHHHh
Confidence 9999997632 1222211 1236999999999999999999999999998763 34458888877
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hc--cCcc-EE
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED---IE--EKFD-VL 216 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~--~~~d-~v 216 (327)
..++++++|+|+| +|++|++++++|+++ |++ ++++++++++++.++++|++++++.++..... .. .++| ++
T Consensus 156 ~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v 233 (347)
T PRK10309 156 AQGCEGKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLI 233 (347)
T ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEE
Confidence 8889999999997 799999999999999 887 56666889999999999999998876544221 11 3678 99
Q ss_pred EeCCCCc---hhhhhhhcCCCcEEEeeCCCCC---Cc-----------eeeEEeec-----CHHHHHHHHhHHHCCCcee
Q 020320 217 YDTIGDC---KNSFVVAKDNAPIVDITWPPSH---PR-----------AIYSSLTV-----SGEILEKLRPFIESGKLKA 274 (327)
Q Consensus 217 ~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~---~~-----------~~~~~~~~-----~~~~~~~~~~l~~~g~~~~ 274 (327)
|||+|.. ..++++++++|+++.+|..... +. .+...... ..+.++++++++++|++++
T Consensus 234 ~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~ 313 (347)
T PRK10309 234 LETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSL 313 (347)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCc
Confidence 9999953 7788999999999999854321 10 11111111 2467899999999999987
Q ss_pred eeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320 275 QIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF 308 (327)
Q Consensus 275 ~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~ 308 (327)
.++.++.|+++|+++|++.+.++...||++++++
T Consensus 314 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 314 EPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred hhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 6677899999999999999998888899999763
No 24
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.9e-39 Score=291.54 Aligned_cols=290 Identities=22% Similarity=0.334 Sum_probs=239.0
Q ss_pred ceeEEecccCCC---cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCC
Q 020320 2 QNAWYYEEYGPK---EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVT 77 (327)
Q Consensus 2 ~~~~v~~~~~~~---~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~ 77 (327)
||++++++++.+ +.+++.+.|.|.++++||+||+.++++|++|++.+.+.++ ...+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 899999998865 4689999999999999999999999999999999887653 235689999999999999999999
Q ss_pred C-CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEE-
Q 020320 78 K-FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIV- 155 (327)
Q Consensus 78 ~-~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~- 155 (327)
+ +++||+|+++.. .+|+|++|++++++.++++|+++++++++.+++.+.|||..+..... ++++++|+
T Consensus 81 ~~~~vGd~V~~~~~---------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~~ 150 (324)
T cd08291 81 AQSLIGKRVAFLAG---------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVHT 150 (324)
T ss_pred ccCCCCCEEEecCC---------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEEc
Confidence 6 999999998642 14899999999999999999999999999888888899866655555 55666665
Q ss_pred cCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhh
Q 020320 156 GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSF 227 (327)
Q Consensus 156 ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~ 227 (327)
+++|++|++++|+|+.+ |++++++++++++.+.++++|++++++.+..++.... +++|++||++|.. ...+
T Consensus 151 ~g~g~vG~~a~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~ 229 (324)
T cd08291 151 AAASALGRMLVRLCKAD-GIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQIL 229 (324)
T ss_pred cCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHH
Confidence 78999999999999999 9999888899999999999999999988776654432 3799999999854 5678
Q ss_pred hhhcCCCcEEEeeCCCCCC---c----------eeeEEe--e----cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320 228 VVAKDNAPIVDITWPPSHP---R----------AIYSSL--T----VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI 288 (327)
Q Consensus 228 ~~l~~~g~~v~~g~~~~~~---~----------~~~~~~--~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~ 288 (327)
.+++++|+++.+|...... . .+.... . ...+.+++++++++ +.+++. ++++|+++|++
T Consensus 230 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--i~~~~~l~~~~ 306 (324)
T cd08291 230 LAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTT--FASRYPLALTL 306 (324)
T ss_pred HhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccc--eeeEEcHHHHH
Confidence 9999999999987532111 0 011110 0 12456788889988 888764 47899999999
Q ss_pred HHHHHHHhCCCCceEEE
Q 020320 289 EAFRYLETGRARGKVVI 305 (327)
Q Consensus 289 ~a~~~~~~~~~~gk~vv 305 (327)
+||+.+.++...||+++
T Consensus 307 ~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 307 EAIAFYSKNMSTGKKLL 323 (324)
T ss_pred HHHHHHHhCCCCCeEEe
Confidence 99999999988899886
No 25
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.6e-39 Score=294.83 Aligned_cols=297 Identities=16% Similarity=0.273 Sum_probs=239.4
Q ss_pred EEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC-CCCCCCCcccccccEEEEEeCCCCCCCCCCC
Q 020320 5 WYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPGCDMAGIVVAKGTSVTKFNTGD 83 (327)
Q Consensus 5 ~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 83 (327)
+++++++.+ +++++.|.|.++++||+||+.++++|++|++.+.+.+ +...+|.++|||++|+|+++|++++.+ +||
T Consensus 2 ~~~~~~g~~--~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCC--ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 567777654 8999999999999999999999999999998874433 234578999999999999999999887 999
Q ss_pred EEEEec------------ccccccCc-----CCCCCceeeEEEeeccceecCCC------CCCHHhhcccchHHHHHHHH
Q 020320 84 EVYGNI------------QDFNAEGK-----LKQLGALAEFIVVEESLIAKKPK------NISFEEAASLPLAVQTAIEG 140 (327)
Q Consensus 84 ~V~~~~------------~~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~ 140 (327)
+|+... +..+.|.. ....|+|+||+.++.+.++++|+ +++++.++.++.++.++|++
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a 158 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA 158 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence 998632 11222321 12469999999999999999998 89999998888899999999
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC---hhhhc------c
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK---YEDIE------E 211 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~------~ 211 (327)
+....+++|++|+|+|+ |++|++++++|+++ |++++++++++++++.++++|++++++..+.+ +.+.. +
T Consensus 159 ~~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~ 236 (349)
T TIGR03201 159 AVQAGLKKGDLVIVIGA-GGVGGYMVQTAKAM-GAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKAR 236 (349)
T ss_pred HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccC
Confidence 98888999999999996 99999999999999 88888888999999999999999988765532 22211 3
Q ss_pred Ccc----EEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC-Cc----------eeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 212 KFD----VLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH-PR----------AIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 212 ~~d----~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
++| ++||++|.. ..++.+++++|+++.+|..... .. .+...+....++++++++++++|+++
T Consensus 237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~ 316 (349)
T TIGR03201 237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQ 316 (349)
T ss_pred CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCC
Confidence 565 899999964 5678999999999999865321 10 11112223457899999999999998
Q ss_pred eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 274 AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 274 ~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+..+. +.|+++++++||+.+.++...+|+++++
T Consensus 317 ~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 317 LGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred cccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 75444 4799999999999999998889988853
No 26
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=3.4e-39 Score=294.33 Aligned_cols=299 Identities=22% Similarity=0.260 Sum_probs=241.6
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
+||++++..+++. +++++.|.|.++++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++++
T Consensus 2 ~~ka~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08277 2 KCKAAVAWEAGKP--LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLK 78 (365)
T ss_pred ccEEEEEccCCCC--cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCC
Confidence 6899999876643 89999999999999999999999999999999887654 45789999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCcC-------------------------CCCCceeeEEEeeccceecCCCCCC
Q 020320 81 TGDEVYGNIQ------------DFNAEGKL-------------------------KQLGALAEFIVVEESLIAKKPKNIS 123 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~~p~~~~ 123 (327)
+||+|++... ..+.|... ...|+|+||++++.++++++|++++
T Consensus 79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 9999987521 11222111 1258999999999999999999999
Q ss_pred HHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeC
Q 020320 124 FEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDY 201 (327)
Q Consensus 124 ~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~ 201 (327)
+++++.++.++.|||+++ +..++++|++|+|+| +|++|++++++|+++ |+ +++++++++++++.++++|++++++.
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~ 236 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIA-GASRIIGVDINEDKFEKAKEFGATDFINP 236 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCcEecc
Confidence 999999999999999987 568899999999997 799999999999999 88 57777889999999999999999876
Q ss_pred CCCC--hhhhc-----cCccEEEeCCCCc---hhhhhhhcCC-CcEEEeeCCCCC--C---ce------eeEEee--c-C
Q 020320 202 RKTK--YEDIE-----EKFDVLYDTIGDC---KNSFVVAKDN-APIVDITWPPSH--P---RA------IYSSLT--V-S 256 (327)
Q Consensus 202 ~~~~--~~~~~-----~~~d~v~d~~g~~---~~~~~~l~~~-g~~v~~g~~~~~--~---~~------~~~~~~--~-~ 256 (327)
.+.+ +.+.. +++|++||++|.. ..++.+++++ |+++.+|..... + .. +..+.. + .
T Consensus 237 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 316 (365)
T cd08277 237 KDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGGFKS 316 (365)
T ss_pred ccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCCCCh
Confidence 5532 22211 4799999999853 6788899885 999998864311 1 01 111111 1 1
Q ss_pred HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 257 GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 257 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
...++++++++++++++..++.++.|+++|+++||+.+.+++ ..|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i 364 (365)
T cd08277 317 RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI 364 (365)
T ss_pred HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence 457899999999999887666789999999999999998777 357775
No 27
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=5.1e-39 Score=290.34 Aligned_cols=291 Identities=16% Similarity=0.164 Sum_probs=221.1
Q ss_pred eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC----CCCCCcccccccEEEEEeCCCCCC
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP----SDFPAVPGCDMAGIVVAKGTSVTK 78 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~----~~~p~~~G~e~~G~V~~vG~~v~~ 78 (327)
|+.+++.+++ +++++.|.|+ +++||+|||.++|||++|++.+.|.+.. ..+|.++|||++|+|+++|.+ +
T Consensus 4 ~~~~~~~~~~---~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 4 QVYRLVRPKF---FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cceEEeccce---EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 5778887765 9999999995 9999999999999999999999886532 357999999999999998874 6
Q ss_pred CCCCCEEEEeccc---------ccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-
Q 020320 79 FNTGDEVYGNIQD---------FNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT- 143 (327)
Q Consensus 79 ~~~Gd~V~~~~~~---------~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~- 143 (327)
+++||||+..... .+.|. +...+|+|+||+++|+++++++|+++++++|+++ ..+.++|+++..
T Consensus 78 ~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~~~ 156 (341)
T cd08237 78 YKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAISRF 156 (341)
T ss_pred cCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHHHH
Confidence 9999999875321 11221 1124699999999999999999999999988754 466778998853
Q ss_pred --cCCCCCCEEEEEcCCchHHHHHHHHHHh-hcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCC
Q 020320 144 --AGFKTGQTIFIVGGAGGVGTLVIQLAKH-FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 144 --~~~~~~~~vlI~ga~g~~G~~a~~la~~-~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~ 220 (327)
..+++|++|+|+| +|++|+++++++++ +++.++++++.+++|++++++++++..++. +.. ..++|++||++
T Consensus 157 ~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~----~~~-~~g~d~viD~~ 230 (341)
T cd08237 157 EQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD----IPE-DLAVDHAFECV 230 (341)
T ss_pred hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh----hhh-ccCCcEEEECC
Confidence 4578999999999 79999999999986 534678788889999999988776544321 111 12699999999
Q ss_pred CC------chhhhhhhcCCCcEEEeeCCCCC-C----------ceeeEEeecCHHHHHHHHhHHHCC---CceeeeCCCc
Q 020320 221 GD------CKNSFVVAKDNAPIVDITWPPSH-P----------RAIYSSLTVSGEILEKLRPFIESG---KLKAQIDPTG 280 (327)
Q Consensus 221 g~------~~~~~~~l~~~g~~v~~g~~~~~-~----------~~~~~~~~~~~~~~~~~~~l~~~g---~~~~~~~~~~ 280 (327)
|. ...++++++++|+++.+|..... + ..+..+.....+.+++++++++++ +.+..+++++
T Consensus 231 G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 310 (341)
T cd08237 231 GGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLVGG 310 (341)
T ss_pred CCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHhcc
Confidence 94 36788999999999999864311 1 111222223457799999999999 2234446678
Q ss_pred ccch---hhHHHHHHHHHhCCCCceEEEEe
Q 020320 281 PYKF---KDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 281 ~~~~---~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
.|++ +++.++|+.+.++ ..||+|+++
T Consensus 311 ~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 311 VFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred ccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 8997 5666677666544 678999976
No 28
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=7.4e-39 Score=288.70 Aligned_cols=300 Identities=26% Similarity=0.324 Sum_probs=227.8
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCC-cccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPA-VPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~ 80 (327)
|+++++..++.. ..+++.+.|.+.+++|+|||.+++||+||++.+.+..+....|. ++|||++|+|+++| .++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~ 77 (350)
T COG1063 1 MKAAVVYVGGGD--VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFK 77 (350)
T ss_pred CceeEEEecCCc--cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCC
Confidence 666776665543 33777777778999999999999999999999999876666666 99999999999999 778899
Q ss_pred CCCEEEEec------------ccccccCcC----------CCCCceeeEEEeeccceec-CCCCCCHHhhcccchHHHHH
Q 020320 81 TGDEVYGNI------------QDFNAEGKL----------KQLGALAEFIVVEESLIAK-KPKNISFEEAASLPLAVQTA 137 (327)
Q Consensus 81 ~Gd~V~~~~------------~~~~~~~~~----------~~~g~~~~~~~v~~~~~~~-~p~~~~~~~aa~~~~~~~ta 137 (327)
+||||+..+ +.++.|... ..+|+|+||+++|.++.++ +|+++ +.+++++...+.++
T Consensus 78 ~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~ 156 (350)
T COG1063 78 VGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATA 156 (350)
T ss_pred CCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhh
Confidence 999997653 234556521 1579999999999755555 57777 44455555556679
Q ss_pred HHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhhhc----
Q 020320 138 IEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKE-LGADKVIDYRKTKYEDIE---- 210 (327)
Q Consensus 138 ~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~---- 210 (327)
+++. ......++.+|+|+| +|++|++++++++.+ |+ ++++++.+++|++++++ .|++.+++...++.....
T Consensus 157 ~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~-Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t 234 (350)
T COG1063 157 YHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLL-GASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELT 234 (350)
T ss_pred hhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHh
Confidence 7774 344445555999999 999999999999999 65 55555689999999998 666766655443322211
Q ss_pred --cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC--Cc----------eeeEEee-cCHHHHHHHHhHHHCCCc
Q 020320 211 --EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH--PR----------AIYSSLT-VSGEILEKLRPFIESGKL 272 (327)
Q Consensus 211 --~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~--~~----------~~~~~~~-~~~~~~~~~~~l~~~g~~ 272 (327)
.++|++|||+|.. ..++.+++++|+++.+|.+... .. .+..+.. .....++.+++++++|++
T Consensus 235 ~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i 314 (350)
T COG1063 235 GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKI 314 (350)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCC
Confidence 3799999999955 6889999999999999976543 21 1122222 344679999999999999
Q ss_pred eeeeCCCcccchhhHHHHHHHHHhCCC-CceEEEEe
Q 020320 273 KAQIDPTGPYKFKDVIEAFRYLETGRA-RGKVVISA 307 (327)
Q Consensus 273 ~~~~~~~~~~~~~~i~~a~~~~~~~~~-~gk~vv~~ 307 (327)
++..+.++.++++++++||+.+.+.+. ..|+++.+
T Consensus 315 ~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 315 DPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred ChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 998777899999999999999987554 56888753
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.4e-38 Score=288.99 Aligned_cols=298 Identities=24% Similarity=0.346 Sum_probs=241.2
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---C--------CCCCCCcccccccEEEE
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---F--------PSDFPAVPGCDMAGIVV 70 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~--------~~~~p~~~G~e~~G~V~ 70 (327)
||++++++++. +.++++|.|+++++||+||+.++++|++|++.+.+.. + ...+|.++|||++|+|+
T Consensus 1 mka~~~~~~~~---l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYHGRKD---IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEecCCc---eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 89999988765 9999999999999999999999999999988665321 1 12368899999999999
Q ss_pred EeCCCCCCCCCCCEEEEecc------------cccccCcC------CCCCceeeEEEeeccceecCCCCCCHHhhcccch
Q 020320 71 AKGTSVTKFNTGDEVYGNIQ------------DFNAEGKL------KQLGALAEFIVVEESLIAKKPKNISFEEAASLPL 132 (327)
Q Consensus 71 ~vG~~v~~~~~Gd~V~~~~~------------~~~~~~~~------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~ 132 (327)
++|++++++++||+|++... ..+.|+.. ...|+|++|+.++.+.++++|+++++++++.+ .
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~ 156 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-E 156 (351)
T ss_pred EeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-c
Confidence 99999999999999987431 11122111 12689999999999999999999999998765 5
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-
Q 020320 133 AVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE- 210 (327)
Q Consensus 133 ~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~- 210 (327)
.+.+||+++...++++|++|+|+| +|.+|++++++|+.+ |+ +++++++++++.++++++|++.+++.++.++.+.+
T Consensus 157 ~~~ta~~~l~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~-G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~ 234 (351)
T cd08233 157 PLAVAWHAVRRSGFKPGDTALVLG-AGPIGLLTILALKAA-GASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVR 234 (351)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHH
Confidence 667899999778899999999998 699999999999999 88 67777788899999999999999988776655432
Q ss_pred -----cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCC
Q 020320 211 -----EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGK 271 (327)
Q Consensus 211 -----~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~ 271 (327)
+++|+++|++|. ...++++++++|+++.+|...... ..+........+.++++++++++|+
T Consensus 235 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~ 314 (351)
T cd08233 235 KLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGK 314 (351)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCC
Confidence 359999999984 367889999999999998654111 1111122234578999999999999
Q ss_pred ceeeeCCCcccchhhH-HHHHHHHHhCCCC-ceEEE
Q 020320 272 LKAQIDPTGPYKFKDV-IEAFRYLETGRAR-GKVVI 305 (327)
Q Consensus 272 ~~~~~~~~~~~~~~~i-~~a~~~~~~~~~~-gk~vv 305 (327)
+++.+..+++|+++|+ ++||+.+.+++.. +|+++
T Consensus 315 l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 315 IDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred CChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 9765455789999996 7999999888875 89887
No 30
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.3e-38 Score=289.61 Aligned_cols=296 Identities=19% Similarity=0.226 Sum_probs=223.6
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK 78 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 78 (327)
||+++++..+ ++ ++++++|.|+++++|||||+.+++||++|++.+.|.++ ...+|.++|||++|+|+++|++ ++
T Consensus 1 mka~~~~~~~-~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVKPGK-PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEecCCC-CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 8999998543 33 99999999999999999999999999999999988652 2346889999999999999999 99
Q ss_pred CCCCCEEEEeccc------------ccccCcC--------CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHH
Q 020320 79 FNTGDEVYGNIQD------------FNAEGKL--------KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAI 138 (327)
Q Consensus 79 ~~~Gd~V~~~~~~------------~~~~~~~--------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 138 (327)
+++||||+..... .+.|... ..+|+|+||+.++++.++++|++++ +.+ .+..++.+++
T Consensus 78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a-~~~~p~~~~~ 155 (355)
T cd08230 78 LSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVG-VLLEPLSVVE 155 (355)
T ss_pred CCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cce-eecchHHHHH
Confidence 9999999865321 1222110 2468999999999999999999998 433 3333444444
Q ss_pred HHHH-------hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEEeCCCCChhh
Q 020320 139 EGFK-------TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVIDYRKTKYED 208 (327)
Q Consensus 139 ~~l~-------~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~~~~~~~~~~ 208 (327)
+++. ..+.++|++|+|+| +|++|++++|+||.+ |++++++++ +++|+++++++|++.+ +....++.+
T Consensus 156 ~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~-G~~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~~~~~~ 232 (355)
T cd08230 156 KAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLR-GFEVYVLNRRDPPDPKADIVEELGATYV-NSSKTPVAE 232 (355)
T ss_pred HHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEe-cCCccchhh
Confidence 4432 12367899999998 699999999999999 888888776 6789999999999874 444433321
Q ss_pred --hccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCC-CC--ce--------------eeEEeecCHHHHHHHHhH
Q 020320 209 --IEEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPS-HP--RA--------------IYSSLTVSGEILEKLRPF 266 (327)
Q Consensus 209 --~~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~-~~--~~--------------~~~~~~~~~~~~~~~~~l 266 (327)
...++|++||++|+. ..++.+++++|+++.+|.... .. .. +..+.....+++++++++
T Consensus 233 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~ 312 (355)
T cd08230 233 VKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVED 312 (355)
T ss_pred hhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHHH
Confidence 225799999999953 678899999999999986442 11 11 111122234678899999
Q ss_pred HHCCCce----eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 267 IESGKLK----AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 267 ~~~g~~~----~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+.++.+. ...+++++|+++|+++||+.+.++. .|+++.+
T Consensus 313 l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 313 LAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 9988732 2234589999999999999886543 4888864
No 31
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=4.2e-38 Score=282.66 Aligned_cols=291 Identities=22% Similarity=0.299 Sum_probs=245.3
Q ss_pred ceeEEecccCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320 2 QNAWYYEEYGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF 79 (327)
Q Consensus 2 ~~~~v~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 79 (327)
||++++.+++.+ +.+++.++|.|.+.++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 899999888765 4689999999999999999999999999999999877654 33468899999999999999999999
Q ss_pred CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCc
Q 020320 80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAG 159 (327)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g 159 (327)
++||+|+++. ..|+|++|++++...++++|+++++++++.++..+.++|+++...++.+|++|+|+|++|
T Consensus 81 ~~Gd~V~~~~----------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g 150 (324)
T cd08292 81 QVGQRVAVAP----------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGG 150 (324)
T ss_pred CCCCEEEecc----------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEccccc
Confidence 9999999874 258999999999999999999999999999888889999999778999999999999899
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK 231 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~ 231 (327)
.+|++++++|+++ |+++++++.++++.+.++++|++++++.++.++...+ +++|++||++|.. ...+++++
T Consensus 151 ~ig~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~ 229 (324)
T cd08292 151 AVGKLVAMLAAAR-GINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLG 229 (324)
T ss_pred HHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhc
Confidence 9999999999999 9999999998888888888999998887765554432 4799999999853 67789999
Q ss_pred CCCcEEEeeCCCCCCc----------ee-eEEeec-----------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHH
Q 020320 232 DNAPIVDITWPPSHPR----------AI-YSSLTV-----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIE 289 (327)
Q Consensus 232 ~~g~~v~~g~~~~~~~----------~~-~~~~~~-----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~ 289 (327)
++|+++.+|....... .. +..... ..+.++++++++.+|.++++. .+.|+++++++
T Consensus 230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~~~~~~~ 307 (324)
T cd08292 230 EGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPV--EAVFDLGDAAK 307 (324)
T ss_pred CCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCcc--ccEecHHHHHH
Confidence 9999999975421110 01 111111 134678899999999998643 67899999999
Q ss_pred HHHHHHhCCCCceEEE
Q 020320 290 AFRYLETGRARGKVVI 305 (327)
Q Consensus 290 a~~~~~~~~~~gk~vv 305 (327)
||+.+.+....+|+++
T Consensus 308 a~~~~~~~~~~~kvvv 323 (324)
T cd08292 308 AAAASMRPGRAGKVLL 323 (324)
T ss_pred HHHHHHcCCCCceEEe
Confidence 9999988877788876
No 32
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.1e-38 Score=290.42 Aligned_cols=303 Identities=20% Similarity=0.230 Sum_probs=233.0
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhh-cCCCC----C--CCCCCcccccccEEEEEeC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRR-QRPLF----P--SDFPAVPGCDMAGIVVAKG 73 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~-~~~~~----~--~~~p~~~G~e~~G~V~~vG 73 (327)
+||++++..++. ++++++|.|.++++||+||+.++++|++|++.+ .+... . ..+|.++|||++|+|+++|
T Consensus 2 ~~~a~~~~~~~~---l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG 78 (410)
T cd08238 2 KTKAWRMYGKGD---LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVG 78 (410)
T ss_pred CcEEEEEEcCCc---eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeC
Confidence 589999988775 999999999999999999999999999999976 44321 1 2468899999999999999
Q ss_pred CCCC-CCCCCCEEEEecc----cccccC--cCCCCCceeeEEEeecc----ceecCCCCCCHHhhccc-chHH-HHHHHH
Q 020320 74 TSVT-KFNTGDEVYGNIQ----DFNAEG--KLKQLGALAEFIVVEES----LIAKKPKNISFEEAASL-PLAV-QTAIEG 140 (327)
Q Consensus 74 ~~v~-~~~~Gd~V~~~~~----~~~~~~--~~~~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~-~~~~-~ta~~~ 140 (327)
++++ ++++||||++... ....|. +...+|+|+||++++.+ +++++|+++++++++++ +++. .+++++
T Consensus 79 ~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a 158 (410)
T cd08238 79 KKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTA 158 (410)
T ss_pred CCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhh
Confidence 9998 5999999987532 111121 12246999999999986 68999999999998865 4332 223433
Q ss_pred H---------HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC---cEEEEeCCcccHHHHHHc--------CCC-EEE
Q 020320 141 F---------KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA---SHVVATTSTPKVEFVKEL--------GAD-KVI 199 (327)
Q Consensus 141 l---------~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~---~~v~~~~~~~~~~~~~~~--------g~~-~v~ 199 (327)
+ .+.++++|++|+|+|++|++|++++|+|+++ |. ++++++.+++|++.++++ |++ .++
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~-G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i 237 (410)
T cd08238 159 NYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHG-PIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYV 237 (410)
T ss_pred cccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhc-ccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEE
Confidence 2 3477899999999998999999999999997 43 688888999999999987 666 456
Q ss_pred eCCC-CChhhhc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCC-CC---CCc----------eeeEEeec
Q 020320 200 DYRK-TKYEDIE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWP-PS---HPR----------AIYSSLTV 255 (327)
Q Consensus 200 ~~~~-~~~~~~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~-~~---~~~----------~~~~~~~~ 255 (327)
+.+. .++.... +++|++||++|.. ..++.+++++|+++.++.. .. .+. .+..+...
T Consensus 238 ~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 317 (410)
T cd08238 238 NPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG 317 (410)
T ss_pred CCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCC
Confidence 6543 3333321 3799999999743 6788999999988766432 11 111 11112223
Q ss_pred CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320 256 SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF 308 (327)
Q Consensus 256 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~ 308 (327)
...+++++++++++|++++.++.+++|+++|+++||+.+. ++..+|+++.+.
T Consensus 318 ~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 318 NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 4568999999999999998767789999999999999998 677799999873
No 33
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.5e-38 Score=262.32 Aligned_cols=294 Identities=28% Similarity=0.367 Sum_probs=242.9
Q ss_pred ceeEEecccCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320 2 QNAWYYEEYGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF 79 (327)
Q Consensus 2 ~~~~v~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 79 (327)
.|+++|+.+|++ +++++++.+.|....++|+||.+++.|||+|+..++|.|+ .+.+|.+-|+|++|+|+.+|+++++|
T Consensus 20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf 99 (354)
T KOG0025|consen 20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF 99 (354)
T ss_pred cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence 489999999998 7899999999999999999999999999999999999996 35689999999999999999999999
Q ss_pred CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCC
Q 020320 80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGA 158 (327)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~ 158 (327)
++||+|+.... ..|.|++|.+.+++.++++++.++++.||++..+.+|||.+|.. ..+.+||+|+-.||.
T Consensus 100 k~Gd~VIp~~a---------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan 170 (354)
T KOG0025|consen 100 KPGDWVIPLSA---------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN 170 (354)
T ss_pred CCCCeEeecCC---------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence 99999999864 57999999999999999999999999999999999999999964 889999999999999
Q ss_pred chHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCC---hhh---hccCccEEEeCCCCc--hhh
Q 020320 159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTK---YED---IEEKFDVLYDTIGDC--KNS 226 (327)
Q Consensus 159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~---~~~---~~~~~d~v~d~~g~~--~~~ 226 (327)
+++|++++|+||++ |++.|-++++....+.+ +.+||++|+...+.. +.. ...++.+.|||+|+- ...
T Consensus 171 S~VG~~ViQlaka~-GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~i 249 (354)
T KOG0025|consen 171 SGVGQAVIQLAKAL-GIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEI 249 (354)
T ss_pred cHHHHHHHHHHHHh-CcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHH
Confidence 99999999999999 99999999877765554 569999998643322 111 124689999999854 677
Q ss_pred hhhhcCCCcEEEeeCCCCCCce------eeEEeecC-----------------HHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320 227 FVVAKDNAPIVDITWPPSHPRA------IYSSLTVS-----------------GEILEKLRPFIESGKLKAQIDPTGPYK 283 (327)
Q Consensus 227 ~~~l~~~g~~v~~g~~~~~~~~------~~~~~~~~-----------------~~~~~~~~~l~~~g~~~~~~~~~~~~~ 283 (327)
.+.|.+||.++.+|.....|.. +|..+.+. .+.+.++.++++.|++..+. ....+
T Consensus 250 ar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~ 327 (354)
T KOG0025|consen 250 ARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVP 327 (354)
T ss_pred HHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeee
Confidence 8999999999999987644432 22211110 15578899999999998764 45678
Q ss_pred hhhHHHHHHHHHhCCC-CceEEEEe
Q 020320 284 FKDVIEAFRYLETGRA-RGKVVISA 307 (327)
Q Consensus 284 ~~~i~~a~~~~~~~~~-~gk~vv~~ 307 (327)
+.+...|++...+... .+|-++.+
T Consensus 328 L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 328 LADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred chhhhHHHHHHHHHhccCCceEEEe
Confidence 8888888876544433 34555544
No 34
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.3e-37 Score=280.69 Aligned_cols=298 Identities=22% Similarity=0.312 Sum_probs=246.1
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++..++.. +++++.|.|.+.+++|+||+.++++|++|+..+.+..+...+|.++|||++|+|+++|++++++++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~ 78 (333)
T cd08296 1 YKAVQVTEPGGP--LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKV 78 (333)
T ss_pred CeEEEEccCCCC--ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCC
Confidence 899999988532 999999999999999999999999999999998886544456889999999999999999999999
Q ss_pred CCEEEEec-----c--------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320 82 GDEVYGNI-----Q--------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT 143 (327)
Q Consensus 82 Gd~V~~~~-----~--------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~ 143 (327)
||+|++.. + ..+.|. +....|++++|+.++..+++++|+++++.+++.++.++.++|+++..
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~ 158 (333)
T cd08296 79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN 158 (333)
T ss_pred CCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence 99998631 1 112222 11225899999999999999999999999999899999999999977
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEEEeCC
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVLYDTI 220 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v~d~~ 220 (327)
.++.++++|+|+| +|.+|++++++|+++ |++++++++++++++.++++|++++++..+.++... .+++|+++|+.
T Consensus 159 ~~~~~~~~vlV~g-~g~iG~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~~ 236 (333)
T cd08296 159 SGAKPGDLVAVQG-IGGLGHLAVQYAAKM-GFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLILATA 236 (333)
T ss_pred cCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEEEECC
Confidence 7899999999999 899999999999999 999888889999999999999999998776555432 25799999998
Q ss_pred CC---chhhhhhhcCCCcEEEeeCCCCC-Cc----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhh
Q 020320 221 GD---CKNSFVVAKDNAPIVDITWPPSH-PR----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKD 286 (327)
Q Consensus 221 g~---~~~~~~~l~~~g~~v~~g~~~~~-~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 286 (327)
|. ....+++++++|+++.+|..... +. .+..........+..+++++.++++++. .+.|++++
T Consensus 237 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---v~~~~~~~ 313 (333)
T cd08296 237 PNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPM---VETFPLEK 313 (333)
T ss_pred CchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCce---EEEEEHHH
Confidence 63 37788999999999999854311 10 1111112345778899999999988754 35899999
Q ss_pred HHHHHHHHHhCCCCceEEEE
Q 020320 287 VIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 287 i~~a~~~~~~~~~~gk~vv~ 306 (327)
+++||+.+.+++..||+|++
T Consensus 314 ~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 314 ANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHCCCCceeEEeC
Confidence 99999999999999999874
No 35
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.2e-37 Score=278.47 Aligned_cols=296 Identities=27% Similarity=0.352 Sum_probs=249.7
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
|||++++.++|.+..+++++++.|.++++||+||+.++++|++|++...+.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 79999999998888899999999999999999999999999999998877765445688899999999999999999999
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG 159 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g 159 (327)
+||+|++... ..|+|++|+.++.++++++|+++++++++.++..+.++|+++. ...+.+|++++|+|++|
T Consensus 81 ~Gd~V~~~~~---------~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g 151 (327)
T PRK10754 81 VGDRVVYAQS---------ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAG 151 (327)
T ss_pred CCCEEEECCC---------CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCc
Confidence 9999986531 3589999999999999999999999999988888899999985 57899999999999999
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK 231 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~ 231 (327)
.+|++++++++.+ |++++.++.++++.+.++++|++++++.+..++...+ +++|+++|++|.. ...+.+++
T Consensus 152 ~ig~~~~~lak~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~ 230 (327)
T PRK10754 152 GVGLIACQWAKAL-GAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQ 230 (327)
T ss_pred HHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhc
Confidence 9999999999999 9999999999999999999999998877665554422 3699999999853 67889999
Q ss_pred CCCcEEEeeCCCCC----Ccee------eEE--e-----ecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHH
Q 020320 232 DNAPIVDITWPPSH----PRAI------YSS--L-----TVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEA 290 (327)
Q Consensus 232 ~~g~~v~~g~~~~~----~~~~------~~~--~-----~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a 290 (327)
++|+++.+|..... .... ... . ... .+.++.+++++.+|.+++....++.|++++++++
T Consensus 231 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a 310 (327)
T PRK10754 231 RRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRA 310 (327)
T ss_pred cCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHH
Confidence 99999999754311 0000 100 0 011 2345678999999999876555789999999999
Q ss_pred HHHHHhCCCCceEEEE
Q 020320 291 FRYLETGRARGKVVIS 306 (327)
Q Consensus 291 ~~~~~~~~~~gk~vv~ 306 (327)
++.+.++...+|+|+.
T Consensus 311 ~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 311 HEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHcCCCcceEEEe
Confidence 9999999888999985
No 36
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.2e-37 Score=283.98 Aligned_cols=300 Identities=26% Similarity=0.322 Sum_probs=240.7
Q ss_pred eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCC----
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTK---- 78 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---- 78 (327)
|++++.++++ .+++++.+.|.++++||+||+.++++|++|+....|.++...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~ 79 (361)
T cd08231 2 RAAVLTGPGK--PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAG 79 (361)
T ss_pred eEEEEcCCCC--CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccC
Confidence 7899998883 4999999999999999999999999999999998886543567889999999999999999986
Q ss_pred --CCCCCEEEEec----cc--------ccccCc------------CCCCCceeeEEEeecc-ceecCCCCCCHHhhcccc
Q 020320 79 --FNTGDEVYGNI----QD--------FNAEGK------------LKQLGALAEFIVVEES-LIAKKPKNISFEEAASLP 131 (327)
Q Consensus 79 --~~~Gd~V~~~~----~~--------~~~~~~------------~~~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~~ 131 (327)
+++||+|+++. .. .+.|.. ....|+|++|++++++ +++++|++++...++.++
T Consensus 80 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~ 159 (361)
T cd08231 80 EPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPAN 159 (361)
T ss_pred CccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhc
Confidence 99999999872 11 112210 1236899999999986 899999999999999888
Q ss_pred hHHHHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChh--
Q 020320 132 LAVQTAIEGFKTA-GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYE-- 207 (327)
Q Consensus 132 ~~~~ta~~~l~~~-~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~-- 207 (327)
.++.|||+++... ..+++++|||+| +|.+|++++++|+++ |+ +++++++++++.++++++|++.+++.+.....
T Consensus 160 ~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 237 (361)
T cd08231 160 CALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLA-GARRVIVIDGSPERLELAREFGADATIDIDELPDPQR 237 (361)
T ss_pred CHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHH
Confidence 9999999999764 445999999998 799999999999999 88 78878888999999999999998876654322
Q ss_pred -----hhc--cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCC---C----------ceeeEEeecCHHHHHHHH
Q 020320 208 -----DIE--EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSH---P----------RAIYSSLTVSGEILEKLR 264 (327)
Q Consensus 208 -----~~~--~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~---~----------~~~~~~~~~~~~~~~~~~ 264 (327)
... +++|++||++|. ...++++++++|+++.+|..... . ..+........+.+++++
T Consensus 238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (361)
T cd08231 238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAV 317 (361)
T ss_pred HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHH
Confidence 111 479999999975 36788999999999999754211 0 011111223456789999
Q ss_pred hHHHCC--CceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 265 PFIESG--KLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 265 ~l~~~g--~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+++.++ ++...++++++|+++++++||+.+.++.. +|+++.+
T Consensus 318 ~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 318 RFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred HHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 999988 55555556789999999999999987764 7998864
No 37
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.1e-37 Score=276.53 Aligned_cols=291 Identities=22% Similarity=0.280 Sum_probs=229.1
Q ss_pred ceeEEeccc--CC--CcceEEeec---cCC-CCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccc--cccEEEEE
Q 020320 2 QNAWYYEEY--GP--KEVLKLGDF---PLP-TPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGC--DMAGIVVA 71 (327)
Q Consensus 2 ~~~~v~~~~--~~--~~~l~~~~~---~~p-~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~--e~~G~V~~ 71 (327)
.|.|++.++ |. ++.+++.+. +.| ++++||||||+.++++||.|+..+.+.......|.++|+ |++|+|..
T Consensus 9 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~ 88 (348)
T PLN03154 9 NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKV 88 (348)
T ss_pred ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEE
Confidence 467777433 22 245888873 555 458999999999999999998654332222235788998 88999999
Q ss_pred eCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccc--ee--cCCCCCCHH-hhcccchHHHHHHHHHH-hcC
Q 020320 72 KGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESL--IA--KKPKNISFE-EAASLPLAVQTAIEGFK-TAG 145 (327)
Q Consensus 72 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--~~--~~p~~~~~~-~aa~~~~~~~ta~~~l~-~~~ 145 (327)
+|++++++++||+|+++ |+|++|..++... ++ ++|++++++ +++.++++++|||+++. ..+
T Consensus 89 vg~~v~~~~~Gd~V~~~-------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~ 155 (348)
T PLN03154 89 VDSDDPNFKPGDLISGI-------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCS 155 (348)
T ss_pred EecCCCCCCCCCEEEec-------------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcC
Confidence 99999999999999864 5799999998753 54 458999986 67788999999999995 588
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCC-Chhhhc-----cCccEEEe
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKT-KYEDIE-----EKFDVLYD 218 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~-----~~~d~v~d 218 (327)
+++|++|+|+|++|++|++++|+||++ |++++++++++++.++++ ++|+++++++++. ++.+.. +++|++||
T Consensus 156 ~~~g~~VlV~GaaG~vG~~aiqlAk~~-G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d 234 (348)
T PLN03154 156 PKKGDSVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFD 234 (348)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEE
Confidence 999999999998899999999999999 999888888999999887 7999999987643 444322 37999999
Q ss_pred CCCCc--hhhhhhhcCCCcEEEeeCCCCCCc-------e----------eeEEeec-----CHHHHHHHHhHHHCCCcee
Q 020320 219 TIGDC--KNSFVVAKDNAPIVDITWPPSHPR-------A----------IYSSLTV-----SGEILEKLRPFIESGKLKA 274 (327)
Q Consensus 219 ~~g~~--~~~~~~l~~~g~~v~~g~~~~~~~-------~----------~~~~~~~-----~~~~~~~~~~l~~~g~~~~ 274 (327)
++|.. ..++.+++++|+++.+|.....+. . +...... ..+.++++++++++|++++
T Consensus 235 ~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~ 314 (348)
T PLN03154 235 NVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY 314 (348)
T ss_pred CCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence 99853 678899999999999985431110 0 0111100 1345788999999999986
Q ss_pred eeCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320 275 QIDPTGPYKFKDVIEAFRYLETGRARGKVVISAF 308 (327)
Q Consensus 275 ~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~ 308 (327)
.. ..+|+|+++++|++.+.+++..||+|+++.
T Consensus 315 ~~--~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 315 IE--DMSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred ce--ecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 52 468999999999999999999999999983
No 38
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=5.1e-37 Score=277.50 Aligned_cols=301 Identities=21% Similarity=0.272 Sum_probs=240.2
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||+++++.++. ++++++|.|.+++++|+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~---~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIEKPNS---LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEecCCe---eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCC
Confidence 89999988664 999999999999999999999999999999998876654457899999999999999999999999
Q ss_pred CCEEEEecc------------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320 82 GDEVYGNIQ------------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA 144 (327)
Q Consensus 82 Gd~V~~~~~------------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 144 (327)
||+|+.... ..+.|. .....|+|++|++++..+++++|++++++.++ +...+.++|+++...
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~~~~ 156 (339)
T PRK10083 78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVTGRT 156 (339)
T ss_pred CCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHHHhc
Confidence 999985321 111121 11236899999999999999999999998876 445667788777788
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHh-hcCCcEE-EEeCCcccHHHHHHcCCCEEEeCCCCChhhhc--c--CccEEEe
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKH-FYGASHV-VATTSTPKVEFVKELGADKVIDYRKTKYEDIE--E--KFDVLYD 218 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~-~~g~~~v-~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~--~--~~d~v~d 218 (327)
++++|++|+|+| +|.+|++++++|++ + |++++ ++.+++++.++++++|++++++.++..+.+.+ . ++|++||
T Consensus 157 ~~~~g~~vlI~g-~g~vG~~~~~~a~~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid 234 (339)
T PRK10083 157 GPTEQDVALIYG-AGPVGLTIVQVLKGVY-NVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIID 234 (339)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEE
Confidence 999999999999 89999999999996 5 88645 45578889999999999999987765555443 2 3579999
Q ss_pred CCCC---chhhhhhhcCCCcEEEeeCCCCCCc---------ee-eEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchh
Q 020320 219 TIGD---CKNSFVVAKDNAPIVDITWPPSHPR---------AI-YSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFK 285 (327)
Q Consensus 219 ~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~---------~~-~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 285 (327)
++|. ...++++++++|+++.+|....... .+ ........+.+++++++++++++++..++++.|+++
T Consensus 235 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~ 314 (339)
T PRK10083 235 AACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDFQ 314 (339)
T ss_pred CCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeeecHH
Confidence 9984 3778899999999999985432110 00 001112457789999999999998743457889999
Q ss_pred hHHHHHHHHHhCC-CCceEEEEeC
Q 020320 286 DVIEAFRYLETGR-ARGKVVISAF 308 (327)
Q Consensus 286 ~i~~a~~~~~~~~-~~gk~vv~~~ 308 (327)
++++|++.+.++. ..+|+++.+.
T Consensus 315 ~~~~a~~~~~~~~~~~~kvvv~~~ 338 (339)
T PRK10083 315 HVADAIELFEKDQRHCCKVLLTFA 338 (339)
T ss_pred HHHHHHHHHhcCCCceEEEEEecC
Confidence 9999999997653 5589998775
No 39
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.1e-36 Score=276.63 Aligned_cols=301 Identities=23% Similarity=0.286 Sum_probs=242.9
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++.+++. +++.+.+.|.+.++||+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|++++++++
T Consensus 1 mka~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGIGK---VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccCCc---cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCC
Confidence 89999998875 889999999999999999999999999999988776544456889999999999999999999999
Q ss_pred CCEEEEecc------------cccccCc--------CCCCCceeeEEEeec--cceecCCCCCCHHhhcccchHHHHHHH
Q 020320 82 GDEVYGNIQ------------DFNAEGK--------LKQLGALAEFIVVEE--SLIAKKPKNISFEEAASLPLAVQTAIE 139 (327)
Q Consensus 82 Gd~V~~~~~------------~~~~~~~--------~~~~g~~~~~~~v~~--~~~~~~p~~~~~~~aa~~~~~~~ta~~ 139 (327)
||+|++... .++.|.+ ....|+|++|+.++. ..++++|+++++++++.++..+.++|+
T Consensus 78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~ 157 (351)
T cd08285 78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH 157 (351)
T ss_pred CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence 999997431 1112221 124689999999986 489999999999999999888999999
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cC
Q 020320 140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EK 212 (327)
Q Consensus 140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~ 212 (327)
++....++++++|+|+| +|++|++++++|+.+ |.. ++++.+++++.++++++|++++++.+..++.... ++
T Consensus 158 ~~~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~ 235 (351)
T cd08285 158 GAELANIKLGDTVAVFG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKG 235 (351)
T ss_pred HHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCC
Confidence 98788999999999997 799999999999999 885 6666678889999999999999987665554322 46
Q ss_pred ccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-c--e------------eeEEee-cCHHHHHHHHhHHHCCCce
Q 020320 213 FDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP-R--A------------IYSSLT-VSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 213 ~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-~--~------------~~~~~~-~~~~~~~~~~~l~~~g~~~ 273 (327)
+|+++|++|.. ..++.+++++|+++.+|...... . . +..... ...+.++++++++++|+++
T Consensus 236 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~ 315 (351)
T cd08285 236 VDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVD 315 (351)
T ss_pred CcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCCC
Confidence 99999999853 67889999999999987543211 0 0 000111 1246789999999999998
Q ss_pred eee-CCCcccchhhHHHHHHHHHhCCC-CceEEEEe
Q 020320 274 AQI-DPTGPYKFKDVIEAFRYLETGRA-RGKVVISA 307 (327)
Q Consensus 274 ~~~-~~~~~~~~~~i~~a~~~~~~~~~-~gk~vv~~ 307 (327)
+.. ...+.|+++++++|++.+.+++. ..|+++.+
T Consensus 316 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 316 PSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred hhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 732 23456999999999999988874 57998864
No 40
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=9e-37 Score=276.52 Aligned_cols=279 Identities=23% Similarity=0.317 Sum_probs=221.3
Q ss_pred cceEEeeccCCCCC-CCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEec
Q 020320 14 EVLKLGDFPLPTPQ-HDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNI 89 (327)
Q Consensus 14 ~~l~~~~~~~p~~~-~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 89 (327)
+.+++.+.|.|.+. +|||||||.+++||+.|+....... ....+|.++|||++|+|+++|++++++++||+|+++.
T Consensus 21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 100 (345)
T cd08293 21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN 100 (345)
T ss_pred cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence 67999999999874 9999999999999999964332111 1234678899999999999999999999999998752
Q ss_pred ccccccCcCCCCCceeeEEEeeccceecCCCCCCHHh----hcccchHHHHHHHHHH-hcCCCCC--CEEEEEcCCchHH
Q 020320 90 QDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEE----AASLPLAVQTAIEGFK-TAGFKTG--QTIFIVGGAGGVG 162 (327)
Q Consensus 90 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~-~~~~~~~--~~vlI~ga~g~~G 162 (327)
+.|++|+++++++++++|+++++.+ ++.++.++.|||+++. .++++++ ++|||+|++|++|
T Consensus 101 ------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG 168 (345)
T cd08293 101 ------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACG 168 (345)
T ss_pred ------------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHH
Confidence 5799999999999999999864332 4456778899999984 5778776 9999999899999
Q ss_pred HHHHHHHHhhcCC-cEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhhhcCC
Q 020320 163 TLVIQLAKHFYGA-SHVVATTSTPKVEFVKE-LGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVVAKDN 233 (327)
Q Consensus 163 ~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~~~ 233 (327)
++++|+|+++ |+ +++++++++++.+.+++ +|+++++++++.++.+.+ +++|++||++|+. ..++.+++++
T Consensus 169 ~~aiqlAk~~-G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~ 247 (345)
T cd08293 169 SLAGQIGRLL-GCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNEN 247 (345)
T ss_pred HHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccC
Confidence 9999999999 88 68888889899888876 999999988776655432 4799999999853 6788999999
Q ss_pred CcEEEeeCCCC--------C-----------CceeeE-Eee--cC----HHHHHHHHhHHHCCCceeeeCCCcccchhhH
Q 020320 234 APIVDITWPPS--------H-----------PRAIYS-SLT--VS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDV 287 (327)
Q Consensus 234 g~~v~~g~~~~--------~-----------~~~~~~-~~~--~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i 287 (327)
|+++.+|.... . ...... ... .. .+.++++++++++|++++.. ...++++++
T Consensus 248 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~l~~~ 325 (345)
T cd08293 248 SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKE--TVYEGLENA 325 (345)
T ss_pred CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcccee--EEeecHHHH
Confidence 99999873210 0 001111 111 11 24577888999999998653 345699999
Q ss_pred HHHHHHHHhCCCCceEEEEe
Q 020320 288 IEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 288 ~~a~~~~~~~~~~gk~vv~~ 307 (327)
++||+.+.+++..||+|+++
T Consensus 326 ~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 326 GEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHhcCCCCCeEEEEC
Confidence 99999999998889999864
No 41
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.3e-36 Score=274.62 Aligned_cols=289 Identities=25% Similarity=0.286 Sum_probs=230.7
Q ss_pred ceeEEecccCCCcceEEeeccC----CCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccc--cEEEEEeCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPL----PTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDM--AGIVVAKGT 74 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~----p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~--~G~V~~vG~ 74 (327)
+|+|....++ ++.|++.+.+. |+|++|||||||.++++||.|+....|.++. ..+|.++|++. .|.+..+|+
T Consensus 8 ~~~~~~~~~~-~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 8 LKAYVTGFPK-ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EecCCCCCCC-ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 3455543333 36799999877 8899999999999999999999988775432 34678889864 466667889
Q ss_pred CCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeec-cceecCC-CCCCHH-hhcccchHHHHHHHHHH-hcCCCCCC
Q 020320 75 SVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEE-SLIAKKP-KNISFE-EAASLPLAVQTAIEGFK-TAGFKTGQ 150 (327)
Q Consensus 75 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~~p-~~~~~~-~aa~~~~~~~ta~~~l~-~~~~~~~~ 150 (327)
+++++++||+|+++ |+|+||+++++ ++++++| +++++. +++.+++++.|||+++. ..++++|+
T Consensus 87 ~v~~~~vGd~V~~~-------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~ 153 (338)
T cd08295 87 GNPDFKVGDLVWGF-------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGE 153 (338)
T ss_pred CCCCCCCCCEEEec-------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCC
Confidence 99999999999864 58999999999 8999995 578876 78888999999999995 58899999
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCC-CChhhhc-----cCccEEEeCCCCc
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRK-TKYEDIE-----EKFDVLYDTIGDC 223 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~-~~~~~~~-----~~~d~v~d~~g~~ 223 (327)
+|+|+|++|++|++++|+||.+ |++++++++++++.+.+++ +|+++++++.. .++.+.+ .++|++||++|+.
T Consensus 154 ~VlI~Ga~G~vG~~aiqlAk~~-G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~ 232 (338)
T cd08295 154 TVFVSAASGAVGQLVGQLAKLK-GCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGK 232 (338)
T ss_pred EEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHH
Confidence 9999998999999999999999 9998888899999999988 99999998643 3444322 4799999999853
Q ss_pred --hhhhhhhcCCCcEEEeeCCCCCCc-----------------eeeEEeec-----CHHHHHHHHhHHHCCCceeeeCCC
Q 020320 224 --KNSFVVAKDNAPIVDITWPPSHPR-----------------AIYSSLTV-----SGEILEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 224 --~~~~~~l~~~g~~v~~g~~~~~~~-----------------~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~~~~ 279 (327)
...+.+++++|+++.+|....... .+...... ..+.++++++++.+|++++.. .
T Consensus 233 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~ 310 (338)
T cd08295 233 MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVE--D 310 (338)
T ss_pred HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEcee--e
Confidence 678899999999999875321100 00110110 124578899999999998753 3
Q ss_pred cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 280 GPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
..|+++++++|++.+.+++..||+|+++
T Consensus 311 ~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 311 IADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred cccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 5699999999999999998889999864
No 42
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.1e-36 Score=273.99 Aligned_cols=285 Identities=22% Similarity=0.307 Sum_probs=230.6
Q ss_pred CceeEEeccc--CCC--cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCC
Q 020320 1 MQNAWYYEEY--GPK--EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSV 76 (327)
Q Consensus 1 ~~~~~v~~~~--~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 76 (327)
|||+|++..+ +.+ +.+++.+.|.|.|++|||+|||.+++||+.|...... ...+|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 7999999993 554 7899999999999999999999999999988653221 124688999999999985 45
Q ss_pred CCCCCCCEEEEecccccccCcCCCCCceeeEEEeecc---ceecCCCCCCH-----HhhcccchHHHHHHHHH-HhcCCC
Q 020320 77 TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEES---LIAKKPKNISF-----EEAASLPLAVQTAIEGF-KTAGFK 147 (327)
Q Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~---~~~~~p~~~~~-----~~aa~~~~~~~ta~~~l-~~~~~~ 147 (327)
+++++||+|+++ ++|++|++++.+ .++++|+++++ ..++.++.+++|||+++ ...+++
T Consensus 76 ~~~~~Gd~V~~~-------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~ 142 (329)
T cd08294 76 SKFPVGTIVVAS-------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPK 142 (329)
T ss_pred CCCCCCCEEEee-------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCC
Confidence 679999999974 478999999999 99999999871 22345688899999998 468899
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD 222 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~ 222 (327)
+|++++|+|++|++|++++|+|+.+ |++++++++++++.++++++|++++++++..++.+.+ +++|++||++|+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~-G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~ 221 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIK-GCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGG 221 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCH
Confidence 9999999999999999999999998 9998888899999999999999999988776655432 479999999985
Q ss_pred c--hhhhhhhcCCCcEEEeeCCCCC--C-----c-----------eeeEEeec-----CHHHHHHHHhHHHCCCceeeeC
Q 020320 223 C--KNSFVVAKDNAPIVDITWPPSH--P-----R-----------AIYSSLTV-----SGEILEKLRPFIESGKLKAQID 277 (327)
Q Consensus 223 ~--~~~~~~l~~~g~~v~~g~~~~~--~-----~-----------~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~~ 277 (327)
. ...+.+++++|+++.+|..... + . .+...... ..+.++++++++++|++++..
T Consensus 222 ~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~- 300 (329)
T cd08294 222 EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYRE- 300 (329)
T ss_pred HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCc-
Confidence 3 6788999999999988742110 0 0 00010100 123467889999999998753
Q ss_pred CCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 278 PTGPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 278 ~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
...|+++++++|++.+.+++..||+++++
T Consensus 301 -~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 301 -HVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred -ccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 45689999999999999999889999863
No 43
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=4.3e-36 Score=271.55 Aligned_cols=298 Identities=26% Similarity=0.346 Sum_probs=244.4
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK 78 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 78 (327)
||++++.+++++ +.+.+.+.|.+.+++|+||+.++++|++|+....+.++ ...+|.++|||++|+|+++|+++.+
T Consensus 1 ~ka~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccCCCC--ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 899999988643 88999999999999999999999999999998877653 3456789999999999999999999
Q ss_pred CCCCCEEEEeccc------------cccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320 79 FNTGDEVYGNIQD------------FNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF 141 (327)
Q Consensus 79 ~~~Gd~V~~~~~~------------~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 141 (327)
+++||+|+++... .+.| -+.+..|+|++|+.++.++++++|+++++++++.++..+.|||+++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l 158 (340)
T cd05284 79 LKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158 (340)
T ss_pred CcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 9999999987421 0111 0123468999999999999999999999999999999999999999
Q ss_pred Hh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cC
Q 020320 142 KT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EK 212 (327)
Q Consensus 142 ~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~ 212 (327)
.. ..+.++++|+|+| +|.+|++++++|+.+ | .+++.+++++++.+.++++|++++++.+.. +...+ .+
T Consensus 159 ~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~ 235 (340)
T cd05284 159 KKALPYLDPGSTVVVIG-VGGLGHIAVQILRAL-TPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRG 235 (340)
T ss_pred HHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCC
Confidence 64 4688999999999 677999999999999 6 888888888999999999999999887665 43322 36
Q ss_pred ccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC--------ce--eeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320 213 FDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP--------RA--IYSSLTVSGEILEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 213 ~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~--------~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 279 (327)
+|+++|++|. ...++++++++|+++.+|.....+ .. +........+.+.+++++++++.+++. .
T Consensus 236 ~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~---~ 312 (340)
T cd05284 236 ADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVE---I 312 (340)
T ss_pred CCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcc---e
Confidence 9999999985 267889999999999987543100 11 111112246778999999999998753 4
Q ss_pred cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 280 GPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+.|+++++++|++.+.+++..+|+++.+
T Consensus 313 ~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 313 TKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 6799999999999999998889998754
No 44
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8e-36 Score=270.80 Aligned_cols=302 Identities=26% Similarity=0.361 Sum_probs=241.3
Q ss_pred ceeEEecccCCCcceEEee-ccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC--------------------CCCCCCc
Q 020320 2 QNAWYYEEYGPKEVLKLGD-FPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF--------------------PSDFPAV 60 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~-~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~--------------------~~~~p~~ 60 (327)
||++++..++.++.+.+.+ .+.|.+.+++|+||+.++++|++|++.+.+.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 8999998887666677765 588888999999999999999999998876542 2356889
Q ss_pred ccccccEEEEEeCCCCCCCCCCCEEEEeccc-c------cccC--cCCCCCceeeEEEeeccceecCCCCCCHHhhcccc
Q 020320 61 PGCDMAGIVVAKGTSVTKFNTGDEVYGNIQD-F------NAEG--KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLP 131 (327)
Q Consensus 61 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~------~~~~--~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~ 131 (327)
+|||++|+|+++|++++++++||+|++.... . +.|. +....|++++|++++..+++++|+++++.+++.++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~ 160 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP 160 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence 9999999999999999999999999985310 0 0010 11135899999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh--h
Q 020320 132 LAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED--I 209 (327)
Q Consensus 132 ~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~ 209 (327)
.++.+||+++...++.++++++|+|++|.+|++++++|+++ |++++.++.++ +++.++++|++.+++........ .
T Consensus 161 ~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (350)
T cd08274 161 CSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRR-GAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAKA 238 (350)
T ss_pred cHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHHh
Confidence 99999999998788999999999998899999999999999 99988777665 88888999998666544433222 1
Q ss_pred --ccCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCC--Cc----------eeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 210 --EEKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSH--PR----------AIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 210 --~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~--~~----------~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
.+++|++||++|.. ..++++++++|+++.+|..... .. .+........+.+.++++++.+++++
T Consensus 239 ~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 318 (350)
T cd08274 239 LGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEIR 318 (350)
T ss_pred hCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCcc
Confidence 14799999999843 7789999999999988743211 00 11111222357899999999999987
Q ss_pred eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 274 AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 274 ~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+. +++.|++++++++|+.+..+...+|+++.+
T Consensus 319 ~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 319 PV--VAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cc--cccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 53 578899999999999998888888988753
No 45
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=5.9e-36 Score=269.00 Aligned_cols=273 Identities=21% Similarity=0.303 Sum_probs=222.2
Q ss_pred CCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccc
Q 020320 12 PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQD 91 (327)
Q Consensus 12 ~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 91 (327)
.++.+++.+.|.|.+++|||||||.++++|+.|+. +.++....|.++|.|++|+|+++|+ ++++||+|+++
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~--- 85 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS--- 85 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe---
Confidence 44679999999999999999999999999997664 3332223478999999999999874 59999999985
Q ss_pred ccccCcCCCCCceeeEEEeeccceecC----CCCCCHHhh-cccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHH
Q 020320 92 FNAEGKLKQLGALAEFIVVEESLIAKK----PKNISFEEA-ASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLV 165 (327)
Q Consensus 92 ~~~~~~~~~~g~~~~~~~v~~~~~~~~----p~~~~~~~a-a~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a 165 (327)
++|++|++++.++++++ |++++++++ +.+++++.|||+++ +.+++++|++|||+|++|++|+++
T Consensus 86 ----------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~a 155 (325)
T TIGR02825 86 ----------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVV 155 (325)
T ss_pred ----------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHH
Confidence 36899999998888777 899999987 67889999999998 578899999999999999999999
Q ss_pred HHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCC-Chhhhc-----cCccEEEeCCCCc--hhhhhhhcCCCcEE
Q 020320 166 IQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT-KYEDIE-----EKFDVLYDTIGDC--KNSFVVAKDNAPIV 237 (327)
Q Consensus 166 ~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~~~g~~v 237 (327)
+|+||.+ |++++++++++++.+.++++|+++++++++. .+.+.. +++|++||++|+. ..++.+++++|+++
T Consensus 156 iqlAk~~-G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv 234 (325)
T TIGR02825 156 GQIAKLK-GCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIA 234 (325)
T ss_pred HHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEE
Confidence 9999998 9999988899999999999999999987653 333321 4799999999853 77889999999999
Q ss_pred EeeCCCC------CCc------------eeeEEe--e----cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHH
Q 020320 238 DITWPPS------HPR------------AIYSSL--T----VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRY 293 (327)
Q Consensus 238 ~~g~~~~------~~~------------~~~~~~--~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~ 293 (327)
.+|.... .+. .+.... . ...+.++++++++++|++++.. ...|+++++++|++.
T Consensus 235 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~~ 312 (325)
T TIGR02825 235 ICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKE--YVIEGFENMPAAFMG 312 (325)
T ss_pred EecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccce--eccccHHHHHHHHHH
Confidence 9874321 110 000111 0 0134688999999999998753 456899999999999
Q ss_pred HHhCCCCceEEEE
Q 020320 294 LETGRARGKVVIS 306 (327)
Q Consensus 294 ~~~~~~~gk~vv~ 306 (327)
+.++...||+|++
T Consensus 313 ~~~~~~~gkvVv~ 325 (325)
T TIGR02825 313 MLKGENLGKTIVK 325 (325)
T ss_pred HhcCCCCCeEEeC
Confidence 9999988999874
No 46
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=6.1e-36 Score=274.72 Aligned_cols=300 Identities=21% Similarity=0.250 Sum_probs=240.9
Q ss_pred ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..++. +++.+.|.|.+ ++++|+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWHGKGD---VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEecCCC---ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCC
Confidence 89999986544 99999999988 599999999999999999999988775556789999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCcC-------------------------CCCCceeeEEEeecc--ceecCCCC
Q 020320 81 TGDEVYGNIQ------------DFNAEGKL-------------------------KQLGALAEFIVVEES--LIAKKPKN 121 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~~-------------------------~~~g~~~~~~~v~~~--~~~~~p~~ 121 (327)
+||+|++... ..+.|... ...|+|++|++++.+ .++++|++
T Consensus 78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~ 157 (386)
T cd08283 78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD 157 (386)
T ss_pred CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence 9999988531 11122110 136899999999987 89999999
Q ss_pred CCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEe
Q 020320 122 ISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVID 200 (327)
Q Consensus 122 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~ 200 (327)
+++++++.++..+.+||+++...++.++++|+|+| +|.+|++++++|+++ |.. +++++.++++.+.+++++...+++
T Consensus 158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~-g~~~vi~~~~~~~~~~~~~~~~~~~vi~ 235 (386)
T cd08283 158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWG-CGPVGLFAARSAKLL-GAERVIAIDRVPERLEMARSHLGAETIN 235 (386)
T ss_pred CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCcEEEc
Confidence 99999999999999999999778899999999997 799999999999999 874 777778999999999985446676
Q ss_pred CCCCC-hhhhc------cCccEEEeCCCC------------------------chhhhhhhcCCCcEEEeeCCCCCCc--
Q 020320 201 YRKTK-YEDIE------EKFDVLYDTIGD------------------------CKNSFVVAKDNAPIVDITWPPSHPR-- 247 (327)
Q Consensus 201 ~~~~~-~~~~~------~~~d~v~d~~g~------------------------~~~~~~~l~~~g~~v~~g~~~~~~~-- 247 (327)
....+ +.+.+ +++|++||++|. ...++++++++|+++.+|.......
T Consensus 236 ~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~ 315 (386)
T cd08283 236 FEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKF 315 (386)
T ss_pred CCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCcc
Confidence 65543 44332 369999999863 2567889999999999985432110
Q ss_pred e----------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCC-CCceEEEE
Q 020320 248 A----------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGR-ARGKVVIS 306 (327)
Q Consensus 248 ~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~-~~gk~vv~ 306 (327)
. +........+.++.++++++++++.+..+.++.|+++++++||+.+.++. ..+|+++.
T Consensus 316 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 316 PIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred CHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 0 01111123567899999999999987544568899999999999998776 45799885
No 47
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.1e-35 Score=268.46 Aligned_cols=294 Identities=32% Similarity=0.515 Sum_probs=239.6
Q ss_pred eeEEeccc---CCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 020320 3 NAWYYEEY---GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKF 79 (327)
Q Consensus 3 ~~~v~~~~---~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 79 (327)
|++++..+ ++++.+++.++|.|+++++||+||+.++++|++|+..+.+..+...+|.++|+|++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 68899987 777889999999999999999999999999999998887765545568889999999999999999999
Q ss_pred CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCC-----CCEEE
Q 020320 80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKT-----GQTIF 153 (327)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~-----~~~vl 153 (327)
++||+|+++.. ....|+|++|++++.++++++|+++++++++.+++++.|||+++ ...++.+ +++++
T Consensus 81 ~~Gd~V~~~~~-------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vl 153 (336)
T TIGR02817 81 KPGDEVWYAGD-------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALL 153 (336)
T ss_pred CCCCEEEEcCC-------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEE
Confidence 99999998631 11358999999999999999999999999999999999999998 4577776 99999
Q ss_pred EEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC---chh
Q 020320 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD---CKN 225 (327)
Q Consensus 154 I~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~---~~~ 225 (327)
|+|++|.+|++++++|+.++|++++++++++++.+.++++|+++++++.. ++...+ +++|+++|+++. ...
T Consensus 154 V~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~ 232 (336)
T TIGR02817 154 IIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQHFKE 232 (336)
T ss_pred EEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHHHHH
Confidence 99999999999999999865889999989999999999999999987543 333221 469999999753 377
Q ss_pred hhhhhcCCCcEEEeeCCCCCC------c--eeeEE-ee----cC-------HHHHHHHHhHHHCCCceeeeCCCccc---
Q 020320 226 SFVVAKDNAPIVDITWPPSHP------R--AIYSS-LT----VS-------GEILEKLRPFIESGKLKAQIDPTGPY--- 282 (327)
Q Consensus 226 ~~~~l~~~g~~v~~g~~~~~~------~--~~~~~-~~----~~-------~~~~~~~~~l~~~g~~~~~~~~~~~~--- 282 (327)
.+.+++++|+++.++...... . .+... .. .. ...++++++++.++.+++.+ ++.+
T Consensus 233 ~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~--~~~~~~~ 310 (336)
T TIGR02817 233 IVELLAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTL--AETFGTI 310 (336)
T ss_pred HHHHhccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccc--hhccCCC
Confidence 889999999999875322111 1 11110 10 00 14578899999999987642 3444
Q ss_pred chhhHHHHHHHHHhCCCCceEEEE
Q 020320 283 KFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 283 ~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
+++++++|++.+.+++..+|++++
T Consensus 311 ~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 311 NAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred CHHHHHHHHHHHHcCCccceEEEe
Confidence 579999999999999888898864
No 48
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-35 Score=267.45 Aligned_cols=298 Identities=24% Similarity=0.364 Sum_probs=244.9
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||+++++++++. +++++.|.|.+.+++++||+.++++|++|++...+.++...+|.++|||++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (334)
T PRK13771 1 MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKP 78 (334)
T ss_pred CeeEEEcCCCCC--cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCC
Confidence 899999988864 999999999999999999999999999999988776655566788999999999999999988999
Q ss_pred CCEEEEecc------------cccccCcC-----CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320 82 GDEVYGNIQ------------DFNAEGKL-----KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA 144 (327)
Q Consensus 82 Gd~V~~~~~------------~~~~~~~~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 144 (327)
||+|++... ..+.|... ...|+|++|+.++.++++++|+++++.+++.+++.+.++|+++...
T Consensus 79 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~ 158 (334)
T PRK13771 79 GDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA 158 (334)
T ss_pred CCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc
Confidence 999998641 11222111 1268999999999999999999999999999999999999999766
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEEEeCCC
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVLYDTIG 221 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v~d~~g 221 (327)
.+.++++++|+|++|.+|++++++++.+ |.+++++++++++.+.++++ ++++++.+ .+... ..++|+++|++|
T Consensus 159 ~~~~~~~vlI~g~~g~~g~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~~~~d~~ld~~g 234 (334)
T PRK13771 159 GVKKGETVLVTGAGGGVGIHAIQVAKAL-GAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKIGGADIVIETVG 234 (334)
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhcCCCcEEEEcCC
Confidence 8999999999998899999999999999 99999888999998888888 77666544 22221 236899999998
Q ss_pred Cc--hhhhhhhcCCCcEEEeeCCCCCCc-------------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhh
Q 020320 222 DC--KNSFVVAKDNAPIVDITWPPSHPR-------------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKD 286 (327)
Q Consensus 222 ~~--~~~~~~l~~~g~~v~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 286 (327)
.. ...+.+++++|+++.+|....... .+........+.++.++++++++.+++. +++.|++++
T Consensus 235 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~ 312 (334)
T PRK13771 235 TPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPV--IGAEVSLSE 312 (334)
T ss_pred hHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcce--EeeeEcHHH
Confidence 53 678899999999999985432110 1111122346789999999999998753 468899999
Q ss_pred HHHHHHHHHhCCCCceEEEEe
Q 020320 287 VIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 287 i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+++||+.+.++...+|+++.+
T Consensus 313 ~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 313 IDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHcCCCcceEEEec
Confidence 999999999888888998865
No 49
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.6e-35 Score=272.87 Aligned_cols=302 Identities=25% Similarity=0.363 Sum_probs=239.6
Q ss_pred CceeEEec--ccCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC----------CCCCCCcccccccE
Q 020320 1 MQNAWYYE--EYGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF----------PSDFPAVPGCDMAG 67 (327)
Q Consensus 1 ~~~~~v~~--~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~----------~~~~p~~~G~e~~G 67 (327)
|||++++. +++++ ..+++.+.|.|.++++||+||+.++++|++|++...+... ....+.++|||++|
T Consensus 12 ~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G 91 (393)
T cd08246 12 KMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASG 91 (393)
T ss_pred hhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEE
Confidence 68998875 34544 3589999999999999999999999999999988765410 01123578999999
Q ss_pred EEEEeCCCCCCCCCCCEEEEecc------------cccccC------cCCCCCceeeEEEeeccceecCCCCCCHHhhcc
Q 020320 68 IVVAKGTSVTKFNTGDEVYGNIQ------------DFNAEG------KLKQLGALAEFIVVEESLIAKKPKNISFEEAAS 129 (327)
Q Consensus 68 ~V~~vG~~v~~~~~Gd~V~~~~~------------~~~~~~------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~ 129 (327)
+|+++|++++.+++||+|++.+. ..+.|. .....|+|++|++++.++++++|+++++++++.
T Consensus 92 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~ 171 (393)
T cd08246 92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAA 171 (393)
T ss_pred EEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhh
Confidence 99999999999999999988642 111121 012358999999999999999999999999998
Q ss_pred cchHHHHHHHHHHh---cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC-
Q 020320 130 LPLAVQTAIEGFKT---AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK- 205 (327)
Q Consensus 130 ~~~~~~ta~~~l~~---~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~- 205 (327)
++..+.|||+++.. ++++++++|+|+|++|++|++++++|+++ |+++++++.++++++.++++|++++++.++.+
T Consensus 172 l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~-G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~ 250 (393)
T cd08246 172 YMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRDFDH 250 (393)
T ss_pred hcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCCEEEccccccc
Confidence 99999999999853 67899999999998899999999999999 99999888999999999999999988764321
Q ss_pred ---------------------hhhhc------c-CccEEEeCCCC--chhhhhhhcCCCcEEEeeCCCCCCc--e-----
Q 020320 206 ---------------------YEDIE------E-KFDVLYDTIGD--CKNSFVVAKDNAPIVDITWPPSHPR--A----- 248 (327)
Q Consensus 206 ---------------------~~~~~------~-~~d~v~d~~g~--~~~~~~~l~~~g~~v~~g~~~~~~~--~----- 248 (327)
+.+.+ . ++|+++|++|. ...++++++++|+++.+|....... .
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~ 330 (393)
T cd08246 251 WGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLW 330 (393)
T ss_pred ccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHh
Confidence 11211 2 79999999985 3778899999999999875432111 0
Q ss_pred -----eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhC-CCCceEEE
Q 020320 249 -----IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETG-RARGKVVI 305 (327)
Q Consensus 249 -----~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~-~~~gk~vv 305 (327)
+........+.+.+++++++++.+.+. .++.|+++++++|++.+.++ ...+|+++
T Consensus 331 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 331 MRQKRIQGSHFANDREAAEANRLVMKGRIDPC--LSKVFSLDETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred hheeEEEecccCcHHHHHHHHHHHHcCCceee--eeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence 011111223578899999999998854 47899999999999999988 67788875
No 50
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.1e-35 Score=266.71 Aligned_cols=297 Identities=25% Similarity=0.326 Sum_probs=244.1
Q ss_pred eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTG 82 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 82 (327)
|+++.++++ +++++++.+.|++.++||+||+.++++|++|++.+.+.+....+|.++|||++|+|+++|++++++++|
T Consensus 1 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (337)
T cd05283 1 KGYAARDAS--GKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVG 78 (337)
T ss_pred CceEEecCC--CCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCC
Confidence 567777776 459999999999999999999999999999999988876555678899999999999999999999999
Q ss_pred CEEEEec-------------ccccccC------------cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHH
Q 020320 83 DEVYGNI-------------QDFNAEG------------KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTA 137 (327)
Q Consensus 83 d~V~~~~-------------~~~~~~~------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta 137 (327)
|+|+... ...+.|. +....|+|++|+.++.++++++|+++++++++.+++.+.+|
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta 158 (337)
T cd05283 79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITV 158 (337)
T ss_pred CEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHH
Confidence 9997321 1122221 11346899999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh-ccCccEE
Q 020320 138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI-EEKFDVL 216 (327)
Q Consensus 138 ~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-~~~~d~v 216 (327)
|+++....+.++++++|.| +|.+|++++++++.+ |++++++++++++.+.++++|++.+++....++... ..++|++
T Consensus 159 ~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~d~v 236 (337)
T cd05283 159 YSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAKAL-GAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLI 236 (337)
T ss_pred HHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCceEE
Confidence 9999877799999999977 899999999999998 998888888888999999999999887655433222 3579999
Q ss_pred EeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCccc
Q 020320 217 YDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPY 282 (327)
Q Consensus 217 ~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 282 (327)
||++|. ...++.+++++|+++.+|...... ..+........+.++.+++++.++++++. .+.|
T Consensus 237 ~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~ 313 (337)
T cd05283 237 IDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPW---VEVI 313 (337)
T ss_pred EECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccc---eEEE
Confidence 999984 377889999999999998543211 01111222345789999999999998753 4789
Q ss_pred chhhHHHHHHHHHhCCCCceEEEE
Q 020320 283 KFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 283 ~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
+++++++||+.+.+++..||+|++
T Consensus 314 ~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 314 PMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred EHHHHHHHHHHHHcCCCcceEeeC
Confidence 999999999999999998998874
No 51
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=6.4e-35 Score=261.94 Aligned_cols=295 Identities=26% Similarity=0.402 Sum_probs=245.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK 78 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 78 (327)
||++++++++.++.+++.+.+.|.+.+++|+||+.++++|++|+....+..+ ...+|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 8999998888777788888888888999999999999999999988876542 2346788999999999999999999
Q ss_pred CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCC
Q 020320 79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGA 158 (327)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~ 158 (327)
+++||+|++... ...|+|++|++++.++++++|+++++++++.++..+.++|..+...+++++++++|+|++
T Consensus 81 ~~~Gd~V~~~~~--------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~ 152 (324)
T cd08244 81 AWLGRRVVAHTG--------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAA 152 (324)
T ss_pred CCCCCEEEEccC--------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 999999998741 125899999999999999999999999999898888999655577889999999999999
Q ss_pred chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhh
Q 020320 159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVA 230 (327)
Q Consensus 159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l 230 (327)
|.+|++++++|+.+ |++++.+++++++.+.++++|++++++.++.++.+.+ +++|+++|++|+. ..++.++
T Consensus 153 ~~~g~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l 231 (324)
T cd08244 153 GGLGSLLVQLAKAA-GATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALL 231 (324)
T ss_pred chHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHh
Confidence 99999999999999 9999988889999999999999988887765554432 4699999999854 6788999
Q ss_pred cCCCcEEEeeCCCCCCc----------eee-EEe---ec----CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320 231 KDNAPIVDITWPPSHPR----------AIY-SSL---TV----SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR 292 (327)
Q Consensus 231 ~~~g~~v~~g~~~~~~~----------~~~-~~~---~~----~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~ 292 (327)
+++|+++.+|....... ... ... .. ..+.++++++++.++.+.+. +++.|+++++++|++
T Consensus 232 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~ 309 (324)
T cd08244 232 APGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPV--VGQTFPLERAAEAHA 309 (324)
T ss_pred ccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCc--cceEEeHHHHHHHHH
Confidence 99999999975432110 000 111 11 13567888999999998753 578899999999999
Q ss_pred HHHhCCCCceEEEEe
Q 020320 293 YLETGRARGKVVISA 307 (327)
Q Consensus 293 ~~~~~~~~gk~vv~~ 307 (327)
.+.++...+|+++.+
T Consensus 310 ~~~~~~~~~kvv~~~ 324 (324)
T cd08244 310 ALEARSTVGKVLLLP 324 (324)
T ss_pred HHHcCCCCceEEEeC
Confidence 999988889998764
No 52
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=4.2e-35 Score=263.86 Aligned_cols=292 Identities=27% Similarity=0.406 Sum_probs=242.8
Q ss_pred CceeEEecccCC--CcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCC
Q 020320 1 MQNAWYYEEYGP--KEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVT 77 (327)
Q Consensus 1 ~~~~~v~~~~~~--~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~ 77 (327)
.||+|++.++++ ++.+++++.+.|.+.+++|+||+.++++|++|++...+.+. ...+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 499999999988 67899999999999999999999999999999998877653 245788999999999999999999
Q ss_pred CCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEc
Q 020320 78 KFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVG 156 (327)
Q Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~g 156 (327)
++++||+|+++. .|+|++|++++.++++++|++ +.+++.++.++.+||+++. ..++.++++++|+|
T Consensus 81 ~~~~Gd~V~~~~-----------~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g 147 (329)
T cd08250 81 DFKVGDAVATMS-----------FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTA 147 (329)
T ss_pred CCCCCCEEEEec-----------CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEe
Confidence 999999999873 589999999999999999987 3466678889999999985 47899999999999
Q ss_pred CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhh
Q 020320 157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVV 229 (327)
Q Consensus 157 a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~ 229 (327)
++|.+|++++++++++ |.+++.+++++++.+.++++|++.+++.....+.+.. +++|+++|++|.. ...+.+
T Consensus 148 a~g~ig~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~ 226 (329)
T cd08250 148 AAGGTGQFAVQLAKLA-GCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDN 226 (329)
T ss_pred CccHHHHHHHHHHHHc-CCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHH
Confidence 9999999999999998 9999988898888999999999888876665443322 4799999999843 678899
Q ss_pred hcCCCcEEEeeCCCCC--------------Cc-----e-eeEEeec------CHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320 230 AKDNAPIVDITWPPSH--------------PR-----A-IYSSLTV------SGEILEKLRPFIESGKLKAQIDPTGPYK 283 (327)
Q Consensus 230 l~~~g~~v~~g~~~~~--------------~~-----~-~~~~~~~------~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 283 (327)
++++|+++.+|..... +. . .+..... ..+.+.++++++.++.+.+...+++.++
T Consensus 227 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 306 (329)
T cd08250 227 LALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRG 306 (329)
T ss_pred hccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccC
Confidence 9999999998754311 00 0 0111111 2355788999999999987544567799
Q ss_pred hhhHHHHHHHHHhCCCCceEEEE
Q 020320 284 FKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 284 ~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
++++++|++.+.++...+|++++
T Consensus 307 ~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 307 LESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHHcCCCCceEEeC
Confidence 99999999999988877888863
No 53
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2.3e-35 Score=269.49 Aligned_cols=300 Identities=29% Similarity=0.434 Sum_probs=244.3
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCC---
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTK--- 78 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 78 (327)
||+|++..++.. +.+.+.|.|.+.+++|+||+.++++|++|+....+.++. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 1 MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred CeeEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCc
Confidence 899999988653 888999999999999999999999999999988776543 57889999999999999999988
Q ss_pred CCCCCEEEEec------------ccccccCcC---------------------------CCCCceeeEEEeeccceecCC
Q 020320 79 FNTGDEVYGNI------------QDFNAEGKL---------------------------KQLGALAEFIVVEESLIAKKP 119 (327)
Q Consensus 79 ~~~Gd~V~~~~------------~~~~~~~~~---------------------------~~~g~~~~~~~v~~~~~~~~p 119 (327)
+++||+|++.. +..+.|.+. ...|+|++|+.++.+.++++|
T Consensus 78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P 157 (367)
T cd08263 78 LSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLP 157 (367)
T ss_pred CCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECC
Confidence 99999999832 111122111 136899999999999999999
Q ss_pred CCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCE
Q 020320 120 KNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADK 197 (327)
Q Consensus 120 ~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~ 197 (327)
+++++.+++.++..+.|||+++. ...+.++++++|+| +|.+|++++++|+.+ |++ +++++.++++.+.++++|++.
T Consensus 158 ~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~-G~~~vi~~~~s~~~~~~~~~~g~~~ 235 (367)
T cd08263 158 ESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAF-GASPIIAVDVRDEKLAKAKELGATH 235 (367)
T ss_pred CCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCce
Confidence 99999999999999999999985 46778999999996 899999999999998 888 777778888989999999999
Q ss_pred EEeCCCCChhhhc------cCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCC---C--------ceee--EEeec
Q 020320 198 VIDYRKTKYEDIE------EKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSH---P--------RAIY--SSLTV 255 (327)
Q Consensus 198 v~~~~~~~~~~~~------~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~---~--------~~~~--~~~~~ 255 (327)
+++.+..++...+ +++|+++|++|+. ...+++++++|+++.++..... . .... .....
T Consensus 236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 9987765554321 4699999999853 6788999999999999754321 0 0011 11111
Q ss_pred -CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 256 -SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 256 -~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
..+.++.+++++.++.+++....++.+++++++++++.+.++...||+|++
T Consensus 316 ~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 146789999999999998754457889999999999999998888899874
No 54
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.4e-35 Score=268.83 Aligned_cols=300 Identities=23% Similarity=0.314 Sum_probs=242.4
Q ss_pred ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++.+++. +.+.+.|.|.+ .+++|+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|+++++++
T Consensus 1 ~ka~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (347)
T cd05278 1 MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLK 77 (347)
T ss_pred CceEEEecCCc---eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccC
Confidence 79999988765 89999999999 999999999999999999999888776566788999999999999999999999
Q ss_pred CCCEEEEecccc------------cccC--------cCCCCCceeeEEEeecc--ceecCCCCCCHHhhcccchHHHHHH
Q 020320 81 TGDEVYGNIQDF------------NAEG--------KLKQLGALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAI 138 (327)
Q Consensus 81 ~Gd~V~~~~~~~------------~~~~--------~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~ 138 (327)
+||+|++.+... ..|. +....|+|++|++++.+ +++++|+++++++++.++.++.|||
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~ 157 (347)
T cd05278 78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGF 157 (347)
T ss_pred CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhee
Confidence 999999843110 0111 11246899999999987 9999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------c
Q 020320 139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------E 211 (327)
Q Consensus 139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~ 211 (327)
+++...+++++++|+|.| +|.+|++++++|+++ |. +++++.+++++.++++++|++.+++.+..++...+ +
T Consensus 158 ~~~~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~ 235 (347)
T cd05278 158 HGAELAGIKPGSTVAVIG-AGPVGLCAVAGARLL-GAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGR 235 (347)
T ss_pred ehhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCC
Confidence 998778899999999976 799999999999998 86 66666677888888899999999887765554422 4
Q ss_pred CccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC---c-------eeeE--EeecCHHHHHHHHhHHHCCCceeee
Q 020320 212 KFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP---R-------AIYS--SLTVSGEILEKLRPFIESGKLKAQI 276 (327)
Q Consensus 212 ~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~---~-------~~~~--~~~~~~~~~~~~~~l~~~g~~~~~~ 276 (327)
++|++||++|. ...++++++++|+++.+|...... . .... ......+.++.+++++.++.+++..
T Consensus 236 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 315 (347)
T cd05278 236 GVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSK 315 (347)
T ss_pred CCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhH
Confidence 69999999975 267789999999999887443211 0 0010 1111246789999999999998643
Q ss_pred CCCcccchhhHHHHHHHHHhCCC-CceEEEE
Q 020320 277 DPTGPYKFKDVIEAFRYLETGRA-RGKVVIS 306 (327)
Q Consensus 277 ~~~~~~~~~~i~~a~~~~~~~~~-~gk~vv~ 306 (327)
.....|++++++++++.+..+.. .+|+++.
T Consensus 316 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 316 LITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred cEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 34578999999999999887776 6788865
No 55
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=4.7e-35 Score=264.89 Aligned_cols=301 Identities=27% Similarity=0.405 Sum_probs=246.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..++ ...+++.+++.|.+.+++|+||+.++++|++|+..+.+.++ ....|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 8999999887 34599999999999999999999999999999998877653 234467889999999999999999999
Q ss_pred CCCEEEEecc-------------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320 81 TGDEVYGNIQ-------------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK 142 (327)
Q Consensus 81 ~Gd~V~~~~~-------------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~ 142 (327)
+||+|++... ....|. +....|+|++|+.++.+.++++|+++++.+++.++..+.|||+++.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~ 159 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK 159 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHH
Confidence 9999987520 011110 1123689999999999999999999999999999999999999997
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEE
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVL 216 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v 216 (327)
..+++++++++|+|+++.+|++++++|+++ |.++++++.++++.+.++++|++++++.+..++...+ +++|++
T Consensus 160 ~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~v 238 (341)
T cd08297 160 KAGLKPGDWVVISGAGGGLGHLGVQYAKAM-GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAV 238 (341)
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEE
Confidence 778999999999998888999999999999 9999999999999999999999999887665544321 479999
Q ss_pred EeCCCC---chhhhhhhcCCCcEEEeeCCCCCC--ce----------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcc
Q 020320 217 YDTIGD---CKNSFVVAKDNAPIVDITWPPSHP--RA----------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGP 281 (327)
Q Consensus 217 ~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~--~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 281 (327)
+|+.++ ....+++++++|+++.+|...... .. +........+.+++++++++++.+.++ .+.
T Consensus 239 l~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~ 315 (341)
T cd08297 239 VVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPH---IQV 315 (341)
T ss_pred EEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCcce---eEE
Confidence 997653 367889999999999998543211 10 001111226889999999999998753 367
Q ss_pred cchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 282 YKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 282 ~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
|++++++++|+.+..+...+|+++++
T Consensus 316 ~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 316 VPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred EcHHHHHHHHHHHHcCCccceEEEeC
Confidence 99999999999999988889999864
No 56
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.7e-35 Score=262.88 Aligned_cols=295 Identities=30% Similarity=0.491 Sum_probs=243.9
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF 79 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 79 (327)
|||++++++++..+.+.+.+.+.|++.+++|+||+.++++|+.|+....+.++ ....|.++|||++|+|+++|++++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 89999999998776788888888889999999999999999999988877542 23346789999999999999999999
Q ss_pred CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCC
Q 020320 80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGA 158 (327)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~ 158 (327)
++||+|+++. ..|+|++|++++.++++++|+++++.+++.++.++.+||+++. ...+.++++++|+|++
T Consensus 81 ~~Gd~V~~~~----------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~ 150 (334)
T PTZ00354 81 KEGDRVMALL----------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGA 150 (334)
T ss_pred CCCCEEEEec----------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 9999999874 2589999999999999999999999999989999999999985 4789999999999999
Q ss_pred chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC-hhhh------ccCccEEEeCCCC--chhhhhh
Q 020320 159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK-YEDI------EEKFDVLYDTIGD--CKNSFVV 229 (327)
Q Consensus 159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~------~~~~d~v~d~~g~--~~~~~~~ 229 (327)
|.+|++++++|+++ |++++++++++++.+.+.++|++++++....+ +... .+++|+++|++|+ ...++.+
T Consensus 151 g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 229 (334)
T PTZ00354 151 SGVGTAAAQLAEKY-GAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEV 229 (334)
T ss_pred chHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHH
Confidence 99999999999999 99888888999999999999999888765543 3332 1469999999974 3678899
Q ss_pred hcCCCcEEEeeCCCCCC---c----------eeeEEe-e--cC-------HHHHHHHHhHHHCCCceeeeCCCcccchhh
Q 020320 230 AKDNAPIVDITWPPSHP---R----------AIYSSL-T--VS-------GEILEKLRPFIESGKLKAQIDPTGPYKFKD 286 (327)
Q Consensus 230 l~~~g~~v~~g~~~~~~---~----------~~~~~~-~--~~-------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 286 (327)
++++|+++.++...... . .+.... . .. .+.++++++++.++.+.+. +.+.+++++
T Consensus 230 l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~ 307 (334)
T PTZ00354 230 LAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLEE 307 (334)
T ss_pred hccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHH
Confidence 99999999987432111 1 111110 0 00 1345778899999998753 578899999
Q ss_pred HHHHHHHHHhCCCCceEEEEeC
Q 020320 287 VIEAFRYLETGRARGKVVISAF 308 (327)
Q Consensus 287 i~~a~~~~~~~~~~gk~vv~~~ 308 (327)
++++++.+.++...+|+++.+.
T Consensus 308 ~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 308 VAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred HHHHHHHHHhCCCCceEEEecC
Confidence 9999999988887889998763
No 57
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.5e-35 Score=267.08 Aligned_cols=301 Identities=25% Similarity=0.388 Sum_probs=246.7
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||+|++++++.+ +.+++.|.|.+.+++|+||+.++++|++|+....+.++...+|.++|+|++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCC
Confidence 899999988765 899999999999999999999999999999988887655566889999999999999999999999
Q ss_pred CCEEEEecc------------cccccCc-----CCCCCceeeEEEeecc--ceecCCCCCCHHhhcccchHHHHHHHHH-
Q 020320 82 GDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEGF- 141 (327)
Q Consensus 82 Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 141 (327)
||+|++... ..+.|.. ....|+|++|+.++.. +++++|+++++++++.++..+.+||+++
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 158 (345)
T cd08260 79 GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALV 158 (345)
T ss_pred CCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHH
Confidence 999987210 1111111 2236899999999874 9999999999999999998999999998
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhhc-----cCccE
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDIE-----EKFDV 215 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~-----~~~d~ 215 (327)
...++.++++++|+| +|.+|++++++|+.+ |.++++++.++++.+.++++|++.+++.++ .++...+ +++|+
T Consensus 159 ~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~ 236 (345)
T cd08260 159 HQARVKPGEWVAVHG-CGGVGLSAVMIASAL-GARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGGAHV 236 (345)
T ss_pred HccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCCCCE
Confidence 468899999999999 899999999999999 999999999999999999999999998776 4444322 27999
Q ss_pred EEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC----c----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCC
Q 020320 216 LYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP----R----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDP 278 (327)
Q Consensus 216 v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~----~----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 278 (327)
+||++|+ ....+++++++|+++.+|...... . .+........+.+++++++++++++.+....
T Consensus 237 vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~ 316 (345)
T cd08260 237 SVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDPEPLV 316 (345)
T ss_pred EEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCChhhhe
Confidence 9999984 267789999999999998543211 0 0111112345778999999999998764345
Q ss_pred CcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 279 TGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
++.+++++++++|+.+..+...+|+|++
T Consensus 317 ~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 317 GRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred eEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 6889999999999999998888888863
No 58
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.5e-35 Score=259.79 Aligned_cols=285 Identities=27% Similarity=0.381 Sum_probs=236.2
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++.+.+ +..+++++.|.|.+.++||+||+.++++|++|++..... ..|.++|||++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence 7999998765 556888899999999999999999999999999876521 23568999999999999999999999
Q ss_pred CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Q 020320 82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGV 161 (327)
Q Consensus 82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~ 161 (327)
||+|+++. ..|+|++|++++.++++++|+++++++++.++..+.+||+++......++++++|+|+.|.+
T Consensus 76 Gd~V~~~~----------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~ 145 (305)
T cd08270 76 GARVVGLG----------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGV 145 (305)
T ss_pred CCEEEEec----------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHH
Confidence 99999874 26899999999999999999999999999999999999999976555569999999988999
Q ss_pred HHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--hhhhhhhcCCCcEEEe
Q 020320 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--KNSFVVAKDNAPIVDI 239 (327)
Q Consensus 162 G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~ 239 (327)
|++++++++.+ |++++.+++++++.+.++++|++.++..... .. .+++|+++|++|+. ..++.+++++|+++.+
T Consensus 146 g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~--~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~ 221 (305)
T cd08270 146 GRFAVQLAALA-GAHVVAVVGSPARAEGLRELGAAEVVVGGSE-LS--GAPVDLVVDSVGGPQLARALELLAPGGTVVSV 221 (305)
T ss_pred HHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecccc-cc--CCCceEEEECCCcHHHHHHHHHhcCCCEEEEE
Confidence 99999999998 9999888899999999999998766543221 11 14799999999853 7789999999999999
Q ss_pred eCCCCCC-------------ceeeEEeec-----CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCc
Q 020320 240 TWPPSHP-------------RAIYSSLTV-----SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARG 301 (327)
Q Consensus 240 g~~~~~~-------------~~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~g 301 (327)
|...... ......... ..+.+..++++++++++.+. +.+.+++++++++++.+.++...+
T Consensus 222 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~g 299 (305)
T cd08270 222 GSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRG 299 (305)
T ss_pred eccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCc
Confidence 8533110 000011111 14668889999999999864 468999999999999999888889
Q ss_pred eEEEEe
Q 020320 302 KVVISA 307 (327)
Q Consensus 302 k~vv~~ 307 (327)
|+++.+
T Consensus 300 kvvi~~ 305 (305)
T cd08270 300 KAVLDV 305 (305)
T ss_pred eEEEeC
Confidence 998864
No 59
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2e-35 Score=268.22 Aligned_cols=298 Identities=20% Similarity=0.282 Sum_probs=236.2
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC--------C-CCCCCcccccccEEEEEe
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF--------P-SDFPAVPGCDMAGIVVAK 72 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~--------~-~~~p~~~G~e~~G~V~~v 72 (327)
||+++++.+++ +++++.+.|++.+++|+||+.++++|++|+..+.|... . ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~---~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEEecCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 89999987765 99999999999999999999999999999988877531 0 146778999999999999
Q ss_pred CCCCC--CCCCCCEEEEeccc-c-----------cccCc-----C--CCCCceeeEEEeecc-ceecCCCCCCHHhhccc
Q 020320 73 GTSVT--KFNTGDEVYGNIQD-F-----------NAEGK-----L--KQLGALAEFIVVEES-LIAKKPKNISFEEAASL 130 (327)
Q Consensus 73 G~~v~--~~~~Gd~V~~~~~~-~-----------~~~~~-----~--~~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~ 130 (327)
|++++ ++++||+|++.... . +.|.. . ...|+|++|+.++++ .++++|++++++.++.+
T Consensus 78 G~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~ 157 (350)
T cd08256 78 GEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI 157 (350)
T ss_pred CCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh
Confidence 99999 89999999874210 0 11110 0 136899999999987 67899999999999887
Q ss_pred chHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcE-EEEeCCcccHHHHHHcCCCEEEeCCCCChhhh
Q 020320 131 PLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH-VVATTSTPKVEFVKELGADKVIDYRKTKYEDI 209 (327)
Q Consensus 131 ~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~-v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 209 (327)
..+.++|+++...++.++++|+|.| +|.+|++++++|+++ |+++ +++++++++..+++++|++++++.+...+...
T Consensus 158 -~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 234 (350)
T cd08256 158 -EPLACALHAVDRANIKFDDVVVLAG-AGPLGLGMIGAARLK-NPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEK 234 (350)
T ss_pred -hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHH
Confidence 7888999998778999999999955 899999999999999 8765 45557888889999999999888766554432
Q ss_pred c------cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc-eee----------EEeecCHHHHHHHHhHHHC
Q 020320 210 E------EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR-AIY----------SSLTVSGEILEKLRPFIES 269 (327)
Q Consensus 210 ~------~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~-~~~----------~~~~~~~~~~~~~~~l~~~ 269 (327)
+ .++|+++|++|. ...++.+++++|+++.+|....... ... .........+.++++++++
T Consensus 235 ~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 314 (350)
T cd08256 235 IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIAS 314 (350)
T ss_pred HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHc
Confidence 2 369999999984 3678899999999999875431110 000 0011234568899999999
Q ss_pred CCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 270 GKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 270 g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
|.+++...+++.|+++++++||+.+.++...+|+++
T Consensus 315 g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 315 GRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred CCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 999864335788999999999999998887788764
No 60
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=3.7e-35 Score=267.73 Aligned_cols=298 Identities=26% Similarity=0.324 Sum_probs=238.0
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
|||++++.+++.. +++.+.+.|.+.+++|+||+.++++|++|++...+.++ ..+|.++|||++|+|+++|+++.+++
T Consensus 2 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08278 2 KTTAAVVREPGGP--FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLK 78 (365)
T ss_pred ccEEeeeccCCCc--ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCC
Confidence 7999999987653 88999999999999999999999999999999887654 34688999999999999999999999
Q ss_pred CCCEEEEeccc-----------ccccCc----------------------------CCCCCceeeEEEeeccceecCCCC
Q 020320 81 TGDEVYGNIQD-----------FNAEGK----------------------------LKQLGALAEFIVVEESLIAKKPKN 121 (327)
Q Consensus 81 ~Gd~V~~~~~~-----------~~~~~~----------------------------~~~~g~~~~~~~v~~~~~~~~p~~ 121 (327)
+||+|++.... .+.|.. ....|+|++|++++.++++++|++
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 79 PGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99999863211 111110 012489999999999999999999
Q ss_pred CCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEE
Q 020320 122 ISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVI 199 (327)
Q Consensus 122 ~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~ 199 (327)
++++.++.+++++.+||+++ ....++++++|+|+| +|.+|++++++|+++ |++ ++++.+++++.+.++++|++.++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~-G~~~v~~~~~~~~k~~~~~~~g~~~~i 236 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIA-GCTTIIAVDIVDSRLELAKELGATHVI 236 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCcEEe
Confidence 99999999999999999987 468899999999997 799999999999999 885 66666888899999999999998
Q ss_pred eCCCCChhhhc-----cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceee-EEee----c
Q 020320 200 DYRKTKYEDIE-----EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIY-SSLT----V 255 (327)
Q Consensus 200 ~~~~~~~~~~~-----~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~-~~~~----~ 255 (327)
+.+..++...+ .++|+++|++|. ...++++++++|+++.+|.....+ .... .... .
T Consensus 237 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (365)
T cd08278 237 NPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV 316 (365)
T ss_pred cCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence 87665543322 479999999984 378899999999999998542110 0000 1111 1
Q ss_pred CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 256 SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 256 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
..+.+++++++++++++++... ...|+++++++|++.+.++... |+++
T Consensus 317 ~~~~~~~~~~~l~~g~l~~~~~-~~~~~l~~~~~a~~~~~~~~~~-k~~~ 364 (365)
T cd08278 317 PQEFIPRLIELYRQGKFPFDKL-VTFYPFEDINQAIADSESGKVI-KPVL 364 (365)
T ss_pred hHHHHHHHHHHHHcCCCChHHh-eEEecHHHHHHHHHHHHCCCce-EEEE
Confidence 1456788999999999864322 3579999999999998877654 6665
No 61
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=4.7e-35 Score=265.78 Aligned_cols=299 Identities=25% Similarity=0.305 Sum_probs=241.9
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC------------CCCCCCcccccccEEE
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF------------PSDFPAVPGCDMAGIV 69 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~------------~~~~p~~~G~e~~G~V 69 (327)
||++++..++.+ ++++++|.|++.++||+||+.++++|++|+..+.+.++ ...+|.++|||++|+|
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 78 (350)
T cd08240 1 MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV 78 (350)
T ss_pred CeeEEeccCCCC--ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence 899999887765 89999999999999999999999999999998877543 2235678999999999
Q ss_pred EEeCCCCCCCCCCCEEEEeccc------------ccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccch
Q 020320 70 VAKGTSVTKFNTGDEVYGNIQD------------FNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPL 132 (327)
Q Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~------------~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~ 132 (327)
+++|++++++++||+|+++... .+.|.. ....|++++|+.++.+.++++|+++++.+++.+++
T Consensus 79 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~ 158 (350)
T cd08240 79 VAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC 158 (350)
T ss_pred EeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence 9999999999999999987311 111211 11468999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc
Q 020320 133 AVQTAIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE 210 (327)
Q Consensus 133 ~~~ta~~~l~~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 210 (327)
.+.+||+++.. ..+.++++|+|+| +|.+|++++++|+++ |+ +++++..++++.+.++++|++.+++.++..+.+..
T Consensus 159 ~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 236 (350)
T cd08240 159 SGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKAL-GPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRI 236 (350)
T ss_pred hhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHH
Confidence 99999999965 4456899999996 899999999999999 88 56677788889999999999888877665543321
Q ss_pred -----cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCC
Q 020320 211 -----EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGK 271 (327)
Q Consensus 211 -----~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~ 271 (327)
+++|+++|++|. ...++++++++|+++.+|...... ..+........+.+.+++++++++.
T Consensus 237 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~~ 316 (350)
T cd08240 237 IKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAGK 316 (350)
T ss_pred HHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcCC
Confidence 369999999984 377899999999999987543211 1111112233477899999999999
Q ss_pred ceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 272 LKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 272 ~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
+++. +...|++++++++|+.+.+++..+|+++.
T Consensus 317 i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 317 LKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred Cccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 8764 35789999999999999988888998874
No 62
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=6.5e-35 Score=266.62 Aligned_cols=300 Identities=23% Similarity=0.300 Sum_probs=235.3
Q ss_pred CceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 1 MQNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 1 ~~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
+||+.++..++.. +++++.|.|.+.+++|+||+.++++|++|++.+.+.+. ..+|.++|||++|+|+++|++++.++
T Consensus 7 ~~~a~~~~~~~~~--~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 7 KCKAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred eeEEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCC
Confidence 5888888766553 89999999999999999999999999999999888652 35788999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCC
Q 020320 81 TGDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNI 122 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~ 122 (327)
+||+|+++.. ..+.|... ...|+|++|++++.++++++|+++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 9999987521 12222110 025899999999999999999999
Q ss_pred CHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEe
Q 020320 123 SFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVID 200 (327)
Q Consensus 123 ~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~ 200 (327)
++++++.+++++.++|+++ ...+++++++|+|+| +|++|++++++|+++ |+ +++++++++++++.++++|++++++
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~a~~lGa~~~i~ 241 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAA-GASRIIAVDINKDKFAKAKELGATECIN 241 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence 9999999999999999987 568899999999997 799999999999999 88 6888888999999999999999887
Q ss_pred CCCCC--hhhh-----ccCccEEEeCCCCc---hhhhhh-hcCCCcEEEeeCCCCC-Cce-----e-----eEEee----
Q 020320 201 YRKTK--YEDI-----EEKFDVLYDTIGDC---KNSFVV-AKDNAPIVDITWPPSH-PRA-----I-----YSSLT---- 254 (327)
Q Consensus 201 ~~~~~--~~~~-----~~~~d~v~d~~g~~---~~~~~~-l~~~g~~v~~g~~~~~-~~~-----~-----~~~~~---- 254 (327)
..+.+ +... .+++|+++|++|.. ..++.. +.++|+++.+|..... +.. + +....
T Consensus 242 ~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 321 (373)
T cd08299 242 PQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGW 321 (373)
T ss_pred ccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCC
Confidence 65432 2221 14799999999853 343443 4679999999854321 100 0 00111
Q ss_pred cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 255 VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 255 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
...+.+.++++.+.++.+++....++.|+++++++||+.+.++.. .|+++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~ 372 (373)
T cd08299 322 KSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLT 372 (373)
T ss_pred ccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEe
Confidence 123567778888888877655456789999999999999887665 477664
No 63
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.4e-35 Score=265.08 Aligned_cols=298 Identities=23% Similarity=0.287 Sum_probs=237.3
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-----------CCCCCCcccccccEEEE
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-----------PSDFPAVPGCDMAGIVV 70 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-----------~~~~p~~~G~e~~G~V~ 70 (327)
||++++..+ .+++++++.|++++++|+||+.++++|+.|+....+... ...+|.++|+|++|+|+
T Consensus 1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~ 76 (341)
T cd08262 1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV 76 (341)
T ss_pred CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence 899999765 399999999999999999999999999999988876321 22357889999999999
Q ss_pred EeCCCCCC-CCCCCEEEEeccc----cccc--CcC-CCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH
Q 020320 71 AKGTSVTK-FNTGDEVYGNIQD----FNAE--GKL-KQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK 142 (327)
Q Consensus 71 ~vG~~v~~-~~~Gd~V~~~~~~----~~~~--~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~ 142 (327)
++|+++++ +++||+|++++.. ...| +.. ...|+|++|++++.++++++|+++++++++ ++..+.+||+++.
T Consensus 77 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~~ 155 (341)
T cd08262 77 DYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAVR 155 (341)
T ss_pred EeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHHH
Confidence 99999987 9999999987321 1111 100 146899999999999999999999999887 5667789999987
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccHHHHHHcCCCEEEeCCCCChh-------hhc--cC
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVEFVKELGADKVIDYRKTKYE-------DIE--EK 212 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~-------~~~--~~ 212 (327)
.++++++++|+|+| +|.+|.+++++|+.+ |++++++ .+++++.++++++|++++++.+..+.. ... ++
T Consensus 156 ~~~~~~g~~VlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 233 (341)
T cd08262 156 RARLTPGEVALVIG-CGPIGLAVIAALKAR-GVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPK 233 (341)
T ss_pred hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCC
Confidence 78999999999997 699999999999999 8875544 467888999999999988886654321 111 46
Q ss_pred ccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCC
Q 020320 213 FDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDP 278 (327)
Q Consensus 213 ~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 278 (327)
+|+++|++|+. ...+.+++++|+++.+|...... ..+........+.++++++++++|.+.+...+
T Consensus 234 ~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i 313 (341)
T cd08262 234 PAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAPMV 313 (341)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHHhe
Confidence 99999999852 66789999999999987542111 11112223445678999999999999865444
Q ss_pred CcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 279 TGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
++.+++++++++++.+.++...+|+|++
T Consensus 314 ~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 314 TGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred EEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 6889999999999999999888999864
No 64
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=4.7e-35 Score=269.98 Aligned_cols=306 Identities=25% Similarity=0.372 Sum_probs=243.0
Q ss_pred CceeEEecc--cCCC-cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC----------CCCCC-Cccccccc
Q 020320 1 MQNAWYYEE--YGPK-EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF----------PSDFP-AVPGCDMA 66 (327)
Q Consensus 1 ~~~~~v~~~--~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~----------~~~~p-~~~G~e~~ 66 (327)
+||+|++.. ++++ +.+++.++|.|.+.+++|+||+.++++|.+|++...+... ....| .++|||++
T Consensus 7 ~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~ 86 (398)
T TIGR01751 7 TMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS 86 (398)
T ss_pred hhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence 599999965 6665 5799999999999999999999999999999876654320 11123 37899999
Q ss_pred EEEEEeCCCCCCCCCCCEEEEecc------------cccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhc
Q 020320 67 GIVVAKGTSVTKFNTGDEVYGNIQ------------DFNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAA 128 (327)
Q Consensus 67 G~V~~vG~~v~~~~~Gd~V~~~~~------------~~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa 128 (327)
|+|+++|++++.+++||+|++.+. ..+.|.. ....|+|++|+.++.++++++|+++++++++
T Consensus 87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa 166 (398)
T TIGR01751 87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAA 166 (398)
T ss_pred EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHh
Confidence 999999999999999999998642 0111111 1135899999999999999999999999999
Q ss_pred ccchHHHHHHHHHH---hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC
Q 020320 129 SLPLAVQTAIEGFK---TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK 205 (327)
Q Consensus 129 ~~~~~~~ta~~~l~---~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~ 205 (327)
.++..+.+||+++. ..++.++++++|+|++|.+|++++++|+++ |+++++++.++++.+.++++|++.+++.++.+
T Consensus 167 ~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~-G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~ 245 (398)
T TIGR01751 167 CPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAG-GGNPVAVVSSPEKAEYCRELGAEAVIDRNDFG 245 (398)
T ss_pred hccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCCEEecCCCcc
Confidence 88989999999985 377899999999998899999999999998 99988888888999999999999999865421
Q ss_pred ----------------------hhhh------ccCccEEEeCCCC--chhhhhhhcCCCcEEEeeCCCCCCce-------
Q 020320 206 ----------------------YEDI------EEKFDVLYDTIGD--CKNSFVVAKDNAPIVDITWPPSHPRA------- 248 (327)
Q Consensus 206 ----------------------~~~~------~~~~d~v~d~~g~--~~~~~~~l~~~g~~v~~g~~~~~~~~------- 248 (327)
+... .+++|++||++|. ...++.+++++|+++.+|.....+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 325 (398)
T TIGR01751 246 HWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLW 325 (398)
T ss_pred hhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHh
Confidence 1111 1369999999984 36788999999999999864321110
Q ss_pred -----eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320 249 -----IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFP 309 (327)
Q Consensus 249 -----~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~ 309 (327)
+........+.+++++++++++++.+. +++++++++++++|+.+.++...+|+|+.+..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 389 (398)
T TIGR01751 326 MRQKRIQGSHFANLREAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA 389 (398)
T ss_pred hcccEEEccccCcHHHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence 111111122447889999999999854 47899999999999999999999999998753
No 65
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.2e-35 Score=266.98 Aligned_cols=294 Identities=27% Similarity=0.354 Sum_probs=240.7
Q ss_pred ceeEEecccCCC-cceEEeeccCCCCCC-CeEEEEEEEEeeChHhHhhhcCCCCCC-C----CCCcccccccEEEEEeCC
Q 020320 2 QNAWYYEEYGPK-EVLKLGDFPLPTPQH-DQLLVQVRAAALNPIDSKRRQRPLFPS-D----FPAVPGCDMAGIVVAKGT 74 (327)
Q Consensus 2 ~~~~v~~~~~~~-~~l~~~~~~~p~~~~-~eVlV~v~~~~i~~~d~~~~~~~~~~~-~----~p~~~G~e~~G~V~~vG~ 74 (327)
||++++..++.+ +.+.+++.|.|.+.+ ++|+||+.++++|++|+..+.+..+.. . +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 899999988765 468999999999887 999999999999999999887765321 2 677899999999999999
Q ss_pred CCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEE
Q 020320 75 SVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIF 153 (327)
Q Consensus 75 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vl 153 (327)
++..+++||+|++... ..|+|++|+.++.++++++|+++++++++.++..+.|+|+++. ...+.++++|+
T Consensus 81 ~v~~~~~Gd~V~~~~~---------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl 151 (341)
T cd08290 81 GVKSLKPGDWVIPLRP---------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI 151 (341)
T ss_pred CCCCCCCCCEEEecCC---------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence 9999999999998742 2589999999999999999999999999999999999999985 47889999999
Q ss_pred EEcCCchHHHHHHHHHHhhcCCcEEEEeCCc----ccHHHHHHcCCCEEEeCCCC---Chhhhc-----cCccEEEeCCC
Q 020320 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTST----PKVEFVKELGADKVIDYRKT---KYEDIE-----EKFDVLYDTIG 221 (327)
Q Consensus 154 I~ga~g~~G~~a~~la~~~~g~~~v~~~~~~----~~~~~~~~~g~~~v~~~~~~---~~~~~~-----~~~d~v~d~~g 221 (327)
|+|++|.+|++++++|+++ |.++++++.++ ++.+.++++|++++++.+.. .+...+ +++|+++|++|
T Consensus 152 I~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g 230 (341)
T cd08290 152 QNGANSAVGQAVIQLAKLL-GIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVG 230 (341)
T ss_pred EccchhHHHHHHHHHHHHc-CCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcC
Confidence 9998899999999999999 99988888765 56788888999999877654 443322 26999999998
Q ss_pred Cc--hhhhhhhcCCCcEEEeeCCCCCCc----------ee-eEEee-------cC----HHHHHHHHhHHHCCCceeeeC
Q 020320 222 DC--KNSFVVAKDNAPIVDITWPPSHPR----------AI-YSSLT-------VS----GEILEKLRPFIESGKLKAQID 277 (327)
Q Consensus 222 ~~--~~~~~~l~~~g~~v~~g~~~~~~~----------~~-~~~~~-------~~----~~~~~~~~~l~~~g~~~~~~~ 277 (327)
+. ...+++++++|+++.+|.....+. .. +.... .. ...+..+++++.++.+.+.
T Consensus 231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 308 (341)
T cd08290 231 GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP-- 308 (341)
T ss_pred cHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--
Confidence 53 567899999999999874321110 00 01111 11 1257889999999998764
Q ss_pred CCccc---chhhHHHHHHHHHhCCCCceEEEEe
Q 020320 278 PTGPY---KFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 278 ~~~~~---~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
....+ ++++++++++.+.++...+|+++++
T Consensus 309 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 309 PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 34556 9999999999999888889999864
No 66
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=5.8e-35 Score=264.72 Aligned_cols=301 Identities=21% Similarity=0.248 Sum_probs=240.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..++. +++++.|.|++ .++||+||++++++|++|+..+.|.++...+|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~---~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEecCCc---eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccC
Confidence 89999988775 99999999986 899999999999999999999888765445688999999999999999999999
Q ss_pred CCCEEEEeccc------------ccccC------cCCCCCceeeEEEeecc--ceecCCCCCCHHhhcccchHHHHHHHH
Q 020320 81 TGDEVYGNIQD------------FNAEG------KLKQLGALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTAIEG 140 (327)
Q Consensus 81 ~Gd~V~~~~~~------------~~~~~------~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~ 140 (327)
+||+|++.... +..|. +....|+|++|+.++.+ .++++|++++..+++.++..+++||++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 157 (345)
T cd08286 78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC 157 (345)
T ss_pred CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence 99999986421 01111 11235899999999987 999999999999999999999999997
Q ss_pred H-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cC
Q 020320 141 F-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EK 212 (327)
Q Consensus 141 l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~ 212 (327)
+ ...++.++++++|.| +|.+|++++++|+.+ | .+++++..++++...++++|++.+++.++.++...+ ++
T Consensus 158 ~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~ 235 (345)
T cd08286 158 GVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLY-SPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRG 235 (345)
T ss_pred HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCC
Confidence 6 567899999999987 699999999999999 8 677776678888888899999999987765543321 36
Q ss_pred ccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCC-c--------eee-EEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320 213 FDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPSHP-R--------AIY-SSLTVSGEILEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 213 ~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~-~--------~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 279 (327)
+|+++|++|.. ..++++++++|+++.+|...... . ... .......+.+..++++++++.+++..+.+
T Consensus 236 ~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (345)
T cd08286 236 VDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKLVT 315 (345)
T ss_pred CCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHcEE
Confidence 99999999853 56668999999999987533111 0 000 11112236688899999999988654457
Q ss_pred cccchhhHHHHHHHHHhCC--CCceEEEEe
Q 020320 280 GPYKFKDVIEAFRYLETGR--ARGKVVISA 307 (327)
Q Consensus 280 ~~~~~~~i~~a~~~~~~~~--~~gk~vv~~ 307 (327)
++|++++++++++.+.+.. ...|+++++
T Consensus 316 ~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 316 HRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred eEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 8999999999999998764 345888864
No 67
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=9.7e-35 Score=261.61 Aligned_cols=298 Identities=29% Similarity=0.405 Sum_probs=244.5
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++..+++ .+.++++|.|.+.+++|+|++.++++|++|++...+.++...+|.++|||++|+|+.+|++++++++
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 1 MKAAILHKPNK--PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred CeEEEEecCCC--ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCC
Confidence 89999987433 4999999999999999999999999999999998886655566889999999999999999999999
Q ss_pred CCEEEEeccc------------ccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320 82 GDEVYGNIQD------------FNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA 144 (327)
Q Consensus 82 Gd~V~~~~~~------------~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 144 (327)
||+|+++... .+.|. +....|+|++|++++..+++++|+++++++++.++.++.+||++++..
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~ 158 (332)
T cd08259 79 GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRA 158 (332)
T ss_pred CCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHHh
Confidence 9999987411 11111 112368999999999999999999999999999999999999999778
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEEEeCCC
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVLYDTIG 221 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v~d~~g 221 (327)
.+.++++++|+|++|.+|++++++++.+ |.+++.+++++++.+.+++++.+.+++... +.+. ..++|++++++|
T Consensus 159 ~~~~~~~vlI~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~v~~~~g 235 (332)
T cd08259 159 GVKKGDTVLVTGAGGGVGIHAIQLAKAL-GARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLGGADVVIELVG 235 (332)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhccCCCEEEECCC
Confidence 8999999999999999999999999999 999988888888888888899888776543 3222 237999999998
Q ss_pred Cc--hhhhhhhcCCCcEEEeeCCCCCCc------------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhH
Q 020320 222 DC--KNSFVVAKDNAPIVDITWPPSHPR------------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDV 287 (327)
Q Consensus 222 ~~--~~~~~~l~~~g~~v~~g~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i 287 (327)
.. ..++.+++++|+++.++....... .+........+.++++++++.++.+++. +++.|+++++
T Consensus 236 ~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~ 313 (332)
T cd08259 236 SPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPV--IDRVVSLEDI 313 (332)
T ss_pred hHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccc--eeEEEcHHHH
Confidence 43 678899999999998875321110 1111222346778999999999998754 4689999999
Q ss_pred HHHHHHHHhCCCCceEEEE
Q 020320 288 IEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 288 ~~a~~~~~~~~~~gk~vv~ 306 (327)
++||+.+.++...+|++++
T Consensus 314 ~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 314 NEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHcCCcccEEEeC
Confidence 9999999988888898863
No 68
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=7e-35 Score=263.48 Aligned_cols=298 Identities=34% Similarity=0.521 Sum_probs=242.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||+++++.++ +..+++.+++.|.++++||+||+.++++|++|++...+.+ ...+|.++|||++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKV 78 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence 8999999986 5569999999999999999999999999999998775543 1235678999999999999999999999
Q ss_pred CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCC----------CCCC
Q 020320 82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGF----------KTGQ 150 (327)
Q Consensus 82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~----------~~~~ 150 (327)
||+|+++... .|++...+|+|++|++++.+.++++|+++++.+++.++..+.+||+++. ..++ .+++
T Consensus 79 Gd~V~~~~~~--~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~ 156 (339)
T cd08249 79 GDRVAGFVHG--GNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGK 156 (339)
T ss_pred CCEEEEEecc--ccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCC
Confidence 9999997531 1112234689999999999999999999999999999999999999985 3433 7899
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC---
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD--- 222 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~--- 222 (327)
+++|+|++|.+|++++++|+++ |++++.++ ++++.+.++++|++++++.+..++.+.+ +++|+++|++|.
T Consensus 157 ~vlI~ga~g~vg~~~~~~a~~~-G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~ 234 (339)
T cd08249 157 PVLIWGGSSSVGTLAIQLAKLA-GYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPES 234 (339)
T ss_pred EEEEEcChhHHHHHHHHHHHHc-CCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchH
Confidence 9999998899999999999999 99888777 5688999999999999988766554432 469999999885
Q ss_pred chhhhhhhcC--CCcEEEeeCCCCCC---ceee--E--Eee----------cCHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320 223 CKNSFVVAKD--NAPIVDITWPPSHP---RAIY--S--SLT----------VSGEILEKLRPFIESGKLKAQIDPTGPYK 283 (327)
Q Consensus 223 ~~~~~~~l~~--~g~~v~~g~~~~~~---~~~~--~--~~~----------~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 283 (327)
...+++++++ +|+++.++...... .... . ... .....++.++++++++++.+. +...++
T Consensus 235 ~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~ 312 (339)
T cd08249 235 AQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVE 312 (339)
T ss_pred HHHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecC
Confidence 2778999999 99999997543211 1111 0 111 112567889999999999864 345666
Q ss_pred --hhhHHHHHHHHHhCC-CCceEEEEe
Q 020320 284 --FKDVIEAFRYLETGR-ARGKVVISA 307 (327)
Q Consensus 284 --~~~i~~a~~~~~~~~-~~gk~vv~~ 307 (327)
++++++||+.+.++. ..+|+|+++
T Consensus 313 ~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 313 GGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred CcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 999999999999888 888999864
No 69
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.8e-34 Score=260.69 Aligned_cols=299 Identities=23% Similarity=0.292 Sum_probs=239.4
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||+++++++++. ..+++.|.|++.++||+||+.++++|++|++.+.+.++. ..|.++|||++|+|+++|++++.+++
T Consensus 1 mka~~~~~~~~~--~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (338)
T PRK09422 1 MKAAVVNKDHTG--DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKV 77 (338)
T ss_pred CeEEEecCCCCC--ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCC
Confidence 899999988763 228899999999999999999999999999988776532 34678999999999999999999999
Q ss_pred CCEEEEec-------------ccccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320 82 GDEVYGNI-------------QDFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT 143 (327)
Q Consensus 82 Gd~V~~~~-------------~~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~ 143 (327)
||+|++.. ...+.|. +....|++++|+.++.++++++|+++++.+++.++..+.|||+++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~~ 157 (338)
T PRK09422 78 GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKV 157 (338)
T ss_pred CCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHHHh
Confidence 99998621 1112221 12236899999999999999999999999999999999999999987
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhh----ccCccEEE-
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDI----EEKFDVLY- 217 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~----~~~~d~v~- 217 (327)
++++++++|+|+| +|++|++++++|+.+.|++++++++++++++.++++|++.+++.+. .++.+. ..++|.++
T Consensus 158 ~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~ 236 (338)
T PRK09422 158 SGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAHAAVV 236 (338)
T ss_pred cCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCcEEEE
Confidence 8899999999999 7999999999999833889999999999999999999999888754 333322 23688555
Q ss_pred eCCCC--chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccch
Q 020320 218 DTIGD--CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKF 284 (327)
Q Consensus 218 d~~g~--~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 284 (327)
++.+. ...++++++++|+++.+|...... ..+........+.++.+++++++|.+.+. ...+++
T Consensus 237 ~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~---v~~~~~ 313 (338)
T PRK09422 237 TAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPK---VQLRPL 313 (338)
T ss_pred eCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCcc---EEEEcH
Confidence 54442 377889999999999987543110 00111111246789999999999998653 346899
Q ss_pred hhHHHHHHHHHhCCCCceEEEEe
Q 020320 285 KDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 285 ~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
++++++|+.+.++...+|+++.+
T Consensus 314 ~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 314 EDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred HHHHHHHHHHHcCCccceEEEec
Confidence 99999999999998889999864
No 70
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.2e-34 Score=262.48 Aligned_cols=297 Identities=29% Similarity=0.385 Sum_probs=241.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++++++. +.+.+.+.|++.+++|+||+.++++|++|+....+.++...+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLHGPND---VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCC
Confidence 79999998875 899999999999999999999999999999988776543345778999999999999999999999
Q ss_pred CCEEEEeccc------------ccccCc-----CCCCCceeeEEEeeccc-----eecCCCCCCHHhhcccchHHHHHHH
Q 020320 82 GDEVYGNIQD------------FNAEGK-----LKQLGALAEFIVVEESL-----IAKKPKNISFEEAASLPLAVQTAIE 139 (327)
Q Consensus 82 Gd~V~~~~~~------------~~~~~~-----~~~~g~~~~~~~v~~~~-----~~~~p~~~~~~~aa~~~~~~~ta~~ 139 (327)
||+|+++... .+.|.. ....|+|++|+.++.++ ++++|+++++.+++.+ ..+.+||+
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~ 156 (343)
T cd08235 78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCIN 156 (343)
T ss_pred CCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHH
Confidence 9999986320 011111 12468999999999998 9999999999999765 67889999
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cC
Q 020320 140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EK 212 (327)
Q Consensus 140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~ 212 (327)
++...++.+|++|+|+| +|.+|++++++|+.+ |.+ ++++.+++++.+.+.++|.+++++.++.++.+.+ ++
T Consensus 157 ~l~~~~~~~g~~VlV~g-~g~vg~~~~~la~~~-g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~ 234 (343)
T cd08235 157 AQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKAS-GARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRG 234 (343)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCcC
Confidence 99777899999999997 799999999999998 998 7777788888888889999998887766554422 35
Q ss_pred ccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-------------ceeeEEeecCHHHHHHHHhHHHCCCceeee
Q 020320 213 FDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-------------RAIYSSLTVSGEILEKLRPFIESGKLKAQI 276 (327)
Q Consensus 213 ~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 276 (327)
+|+++|+++. ....+++++++|+++.++...... ..+........+.++.++++++++.+.+..
T Consensus 235 vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~ 314 (343)
T cd08235 235 ADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKD 314 (343)
T ss_pred CCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHH
Confidence 9999999984 367889999999999987533211 011112223457788999999999987533
Q ss_pred CCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 277 DPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 277 ~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
.....|++++++++++.+.++. .+|+|+
T Consensus 315 ~~~~~~~~~~~~~a~~~~~~~~-~~k~vi 342 (343)
T cd08235 315 LITHRFPLEDIEEAFELAADGK-SLKIVI 342 (343)
T ss_pred heeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence 3457899999999999999888 888886
No 71
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=6.8e-35 Score=265.93 Aligned_cols=298 Identities=25% Similarity=0.353 Sum_probs=241.4
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++..++.+ ++++++|.|.+++++|+||+.++++|++|+..+.+.++ ..+|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (363)
T cd08279 1 MRAAVLHEVGKP--LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKP 77 (363)
T ss_pred CeEEEEecCCCC--ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCC
Confidence 899999988754 89999999999999999999999999999998887654 456788999999999999999999999
Q ss_pred CCEEEEecc------------cccccCcC-------------------------CCCCceeeEEEeeccceecCCCCCCH
Q 020320 82 GDEVYGNIQ------------DFNAEGKL-------------------------KQLGALAEFIVVEESLIAKKPKNISF 124 (327)
Q Consensus 82 Gd~V~~~~~------------~~~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~ 124 (327)
||+|++... ..+.|... ...|+|++|+.++.++++++|+++++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 78 GDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred CCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 999998421 11122110 24689999999999999999999999
Q ss_pred HhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCC
Q 020320 125 EEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYR 202 (327)
Q Consensus 125 ~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~ 202 (327)
++++.++.++.+||+++ ...++.++++++|+| +|.+|++++++|+.+ |.+ ++.+++++++.+.++++|++++++.+
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~-G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~ 235 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIA-GASRIIAVDPVPEKLELARRFGATHTVNAS 235 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence 99999999999999987 468899999999996 799999999999998 886 77777888899999999999998877
Q ss_pred CCChhhhc------cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCC-C-----ceee------EEe----ecCH
Q 020320 203 KTKYEDIE------EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSH-P-----RAIY------SSL----TVSG 257 (327)
Q Consensus 203 ~~~~~~~~------~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~-~-----~~~~------~~~----~~~~ 257 (327)
..++...+ +++|+++|+++. ....+++++++|+++.++..... . ..+. ... ....
T Consensus 236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (363)
T cd08279 236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPR 315 (363)
T ss_pred CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcH
Confidence 65544322 469999999984 26788999999999998754310 0 0000 111 1235
Q ss_pred HHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEE
Q 020320 258 EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVV 304 (327)
Q Consensus 258 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~v 304 (327)
+.+++++++++++.+++...++++|+++++++||+.+.+++..+.++
T Consensus 316 ~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 316 RDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 78899999999999886433568899999999999998887765544
No 72
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=2.2e-34 Score=260.11 Aligned_cols=299 Identities=27% Similarity=0.384 Sum_probs=241.3
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||+++++.++. +.+.+++.|.+.+++|+||+.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~a~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (337)
T cd08261 1 MKALVCEKPGR---LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKV 77 (337)
T ss_pred CeEEEEeCCCc---eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCC
Confidence 79999987654 899999999999999999999999999999988776655556788999999999999999999999
Q ss_pred CCEEEEec------------ccccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320 82 GDEVYGNI------------QDFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA 144 (327)
Q Consensus 82 Gd~V~~~~------------~~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 144 (327)
||+|++.. ...+.|+. ....|+|++|++++++ ++++|+++++++++.+ ..+.++++++...
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~~~~ 155 (337)
T cd08261 78 GDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAVRRA 155 (337)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHHHhc
Confidence 99999731 11222211 1136899999999999 9999999999999866 5667888888778
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEe
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYD 218 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d 218 (327)
++.++++|||+| +|.+|.+++++|+.+ |.+++++++++++.++++++|++++++.+...+...+ .++|+++|
T Consensus 156 ~l~~g~~vLI~g-~g~vG~~a~~lA~~~-g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld 233 (337)
T cd08261 156 GVTAGDTVLVVG-AGPIGLGVIQVAKAR-GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVID 233 (337)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEE
Confidence 899999999996 799999999999999 9999888889999999999999999987765544432 35999999
Q ss_pred CCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccch
Q 020320 219 TIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKF 284 (327)
Q Consensus 219 ~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 284 (327)
++|+ ....+++++++|+++.++...... ..+........+.++++++++++|.+++...+...+++
T Consensus 234 ~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~ 313 (337)
T cd08261 234 ATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPF 313 (337)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeH
Confidence 9974 366789999999999887443110 01111112335678899999999999862224678999
Q ss_pred hhHHHHHHHHHhC-CCCceEEEEe
Q 020320 285 KDVIEAFRYLETG-RARGKVVISA 307 (327)
Q Consensus 285 ~~i~~a~~~~~~~-~~~gk~vv~~ 307 (327)
++++++++.+.++ ...+|+|+++
T Consensus 314 ~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 314 EDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHHHHhcCCCceEEEEEeC
Confidence 9999999999887 4668998753
No 73
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.5e-34 Score=261.95 Aligned_cols=297 Identities=23% Similarity=0.301 Sum_probs=237.9
Q ss_pred ceeEEecccCCCcceEEeeccCCCCC-CCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQ-HDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~-~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..++. +.+++.+.|.+. +++|+|++.++++|++|+....+.++ ..+|.++|+|++|+|+++|+++++++
T Consensus 1 ~~a~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (344)
T cd08284 1 MKAVVFKGPGD---VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLK 76 (344)
T ss_pred CeeEEEecCCC---ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccC
Confidence 89999987643 999999999985 99999999999999999988877654 34578899999999999999999999
Q ss_pred CCCEEEEeccc------------ccccC---------cCCCCCceeeEEEeecc--ceecCCCCCCHHhhcccchHHHHH
Q 020320 81 TGDEVYGNIQD------------FNAEG---------KLKQLGALAEFIVVEES--LIAKKPKNISFEEAASLPLAVQTA 137 (327)
Q Consensus 81 ~Gd~V~~~~~~------------~~~~~---------~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta 137 (327)
+||+|++.... ...|. .....|+|++|++++.+ +++++|+++++++++.++..+.||
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta 156 (344)
T cd08284 77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG 156 (344)
T ss_pred CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence 99999986421 11110 01125899999999864 999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------
Q 020320 138 IEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------ 210 (327)
Q Consensus 138 ~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------ 210 (327)
|+++...++.++++|+|+| +|.+|++++++|+.+ |+ +++++..++++..+++++|++ +++.+..++...+
T Consensus 157 ~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~~ 233 (344)
T cd08284 157 YFGAKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVL-GAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVREATEG 233 (344)
T ss_pred HhhhHhcCCccCCEEEEEC-CcHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhCC
Confidence 9999778889999999997 899999999999999 86 677776788888888999976 4555544443321
Q ss_pred cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc------------eeeEEeecCHHHHHHHHhHHHCCCceee
Q 020320 211 EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR------------AIYSSLTVSGEILEKLRPFIESGKLKAQ 275 (327)
Q Consensus 211 ~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 275 (327)
+++|+++|++|. ...++.+++++|+++.+|....... .+........+.++++++++.++.+++.
T Consensus 234 ~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 313 (344)
T cd08284 234 RGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLE 313 (344)
T ss_pred CCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChH
Confidence 479999999984 3677899999999999985541110 1111122346789999999999998764
Q ss_pred eCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 276 IDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 276 ~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
.++++.|++++++++|+.+.++.. +|+|+.
T Consensus 314 ~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 314 FLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred HhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 345688999999999999888777 898875
No 74
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=2.1e-34 Score=262.71 Aligned_cols=298 Identities=24% Similarity=0.319 Sum_probs=237.2
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
+|++++...+.. +++++.+.|.+.+++|+||+.++++|++|++.+.+.+. ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 1 CKAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred CceeEEecCCCC--cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 478888876653 89999999999999999999999999999998887653 456789999999999999999999999
Q ss_pred CCEEEEecc------------cccccCcC--------------------------CCCCceeeEEEeeccceecCCCCCC
Q 020320 82 GDEVYGNIQ------------DFNAEGKL--------------------------KQLGALAEFIVVEESLIAKKPKNIS 123 (327)
Q Consensus 82 Gd~V~~~~~------------~~~~~~~~--------------------------~~~g~~~~~~~v~~~~~~~~p~~~~ 123 (327)
||+|++... ..+.|... ...|+|++|+.++.+.++++|++++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~ 157 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP 157 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence 999998632 11112100 0247899999999999999999999
Q ss_pred HHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcE-EEEeCCcccHHHHHHcCCCEEEeC
Q 020320 124 FEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH-VVATTSTPKVEFVKELGADKVIDY 201 (327)
Q Consensus 124 ~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~-v~~~~~~~~~~~~~~~g~~~v~~~ 201 (327)
+++++.++.++.++|+++ ..+++.+|++++|+| +|++|++++++|+++ |+++ +++.+++++.+.++++|++++++.
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 235 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAA-GASRIIAVDINKDKFEKAKQLGATECINP 235 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCeeccc
Confidence 999999988999999987 468899999999997 799999999999999 8864 455568899999999999998876
Q ss_pred CCC--Chhhh-----ccCccEEEeCCCC---chhhhhhhc-CCCcEEEeeCCCCC-Cc-----eee------EEe---ec
Q 020320 202 RKT--KYEDI-----EEKFDVLYDTIGD---CKNSFVVAK-DNAPIVDITWPPSH-PR-----AIY------SSL---TV 255 (327)
Q Consensus 202 ~~~--~~~~~-----~~~~d~v~d~~g~---~~~~~~~l~-~~g~~v~~g~~~~~-~~-----~~~------~~~---~~ 255 (327)
.+. ++... .+++|+++|++|. ...++.+++ ++|+++.+|..... .. .+. ... ..
T Consensus 236 ~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 315 (365)
T cd05279 236 RDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWK 315 (365)
T ss_pred ccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCc
Confidence 654 33322 1479999999984 267789999 99999998754311 10 110 010 13
Q ss_pred CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 256 SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 256 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
..+.+..++++++++.+++.++.+++|+++++++||+.+.++... |+++
T Consensus 316 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 316 SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 457789999999999998755678999999999999998876554 5544
No 75
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.9e-34 Score=257.56 Aligned_cols=295 Identities=28% Similarity=0.340 Sum_probs=241.0
Q ss_pred ceeEEecccCCC--cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 020320 2 QNAWYYEEYGPK--EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKF 79 (327)
Q Consensus 2 ~~~~v~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 79 (327)
||++++.+++.+ +.+++.+.+.|.+.++||+||+.++++|++|++...|.++...+|.++|||++|+|+++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 899999988842 348888888888999999999999999999999988876555668899999999999999999999
Q ss_pred CCCCEEEEec-----c--------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320 80 NTGDEVYGNI-----Q--------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF 141 (327)
Q Consensus 80 ~~Gd~V~~~~-----~--------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 141 (327)
++||+|++.. . ..+.|. +....|+|++|+.++.+.++++|+++++.+++.++.++.+||+++
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~ 160 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL 160 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH
Confidence 9999998631 0 111221 111368999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
..++++++++++|+| +|++|+++++++++. |.++++++.++++++.++++|++++++.... ..+++|+++++.+
T Consensus 161 ~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~vD~vi~~~~ 234 (329)
T cd08298 161 KLAGLKPGQRLGLYG-FGASAHLALQIARYQ-GAEVFAFTRSGEHQELARELGADWAGDSDDL----PPEPLDAAIIFAP 234 (329)
T ss_pred HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEcCChHHHHHHHHhCCcEEeccCcc----CCCcccEEEEcCC
Confidence 889999999999997 899999999999999 8999988899999999999999887765432 1246899999865
Q ss_pred C---chhhhhhhcCCCcEEEeeCCCCCCce-----------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhH
Q 020320 222 D---CKNSFVVAKDNAPIVDITWPPSHPRA-----------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDV 287 (327)
Q Consensus 222 ~---~~~~~~~l~~~g~~v~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i 287 (327)
. ...++++++++|+++..|........ +........+.++.++++++++.+++. ++.|+++++
T Consensus 235 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~---~~~~~~~~~ 311 (329)
T cd08298 235 VGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPE---VETYPLEEA 311 (329)
T ss_pred cHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhhhhCceEEEEecCCCHHHHHHHHHHHHcCCCCce---EEEEeHHHH
Confidence 3 37789999999999988743211100 111112446778999999999998763 578999999
Q ss_pred HHHHHHHHhCCCCceEEE
Q 020320 288 IEAFRYLETGRARGKVVI 305 (327)
Q Consensus 288 ~~a~~~~~~~~~~gk~vv 305 (327)
++|++.+.++...+|+++
T Consensus 312 ~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 312 NEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHHHHcCCCcceeeC
Confidence 999999999888888763
No 76
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.9e-34 Score=264.00 Aligned_cols=297 Identities=21% Similarity=0.210 Sum_probs=234.6
Q ss_pred ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..++. ++++++|.|.+ +++||+||+.++++|++|++.+.+.++ ..+|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~---~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (375)
T cd08282 1 MKAVVYGGPGN---VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLK 76 (375)
T ss_pred CceEEEecCCc---eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCC
Confidence 78999987764 99999999996 799999999999999999999887654 34688999999999999999999999
Q ss_pred CCCEEEEecc------------cccccCc---------------CCCCCceeeEEEeecc--ceecCCCCCCHH---hhc
Q 020320 81 TGDEVYGNIQ------------DFNAEGK---------------LKQLGALAEFIVVEES--LIAKKPKNISFE---EAA 128 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~---------------~~~~g~~~~~~~v~~~--~~~~~p~~~~~~---~aa 128 (327)
+||+|++... ..+.|.. ...+|+|++|+.++.+ +++++|++++++ .++
T Consensus 77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a 156 (375)
T cd08282 77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYL 156 (375)
T ss_pred CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhee
Confidence 9999987321 0111211 1125899999999975 899999999998 467
Q ss_pred ccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
.++..+.++|+++...++.+|++|+|.| +|.+|++++++|+++ |+ +++++.+++++.++++++|++ .++.++.++.
T Consensus 157 ~~~~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~ 233 (375)
T cd08282 157 MLSDIFPTGWHGLELAGVQPGDTVAVFG-AGPVGLMAAYSAILR-GASRVYVVDHVPERLDLAESIGAI-PIDFSDGDPV 233 (375)
T ss_pred eecchHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCe-EeccCcccHH
Confidence 7788889999999778899999999976 799999999999999 87 677776888899999999984 4555544433
Q ss_pred hhc-----cCccEEEeCCCC--------------chhhhhhhcCCCcEEEeeCCCCCCc------------ee-------
Q 020320 208 DIE-----EKFDVLYDTIGD--------------CKNSFVVAKDNAPIVDITWPPSHPR------------AI------- 249 (327)
Q Consensus 208 ~~~-----~~~d~v~d~~g~--------------~~~~~~~l~~~g~~v~~g~~~~~~~------------~~------- 249 (327)
..+ +++|+++|++|. ...++.+++++|+++.+|....... .+
T Consensus 234 ~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (375)
T cd08282 234 EQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWA 313 (375)
T ss_pred HHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHh
Confidence 321 369999999874 3667889999999988775331100 00
Q ss_pred -----eEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 250 -----YSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 250 -----~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
........+.++.+++++.++++++...+++.|++++++++++.+.++. .+|+|+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 314 KGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred cCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 0000113467888999999999986433579999999999999998888 8898875
No 77
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=5.4e-34 Score=253.98 Aligned_cols=292 Identities=38% Similarity=0.562 Sum_probs=234.4
Q ss_pred eEEeccc-CCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-C---CCCCccccccc---EEEEEeC-C
Q 020320 4 AWYYEEY-GPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-S---DFPAVPGCDMA---GIVVAKG-T 74 (327)
Q Consensus 4 ~~v~~~~-~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~---~~p~~~G~e~~---G~V~~vG-~ 74 (327)
.+.+..+ +..+....++.++|.+.+++++|++.++++||.|+.+..+.+.. . .+|.+++.++. |.+...| .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~ 86 (347)
T KOG1198|consen 7 RVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDD 86 (347)
T ss_pred eEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccc
Confidence 3344434 44456667789999999999999999999999999999888743 3 47755555554 4445555 3
Q ss_pred CCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-c------CCC
Q 020320 75 SVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-A------GFK 147 (327)
Q Consensus 75 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~------~~~ 147 (327)
.+.....||++.... ..|+|+||.++|...++++|+++++.+|+.+|.+..|||.++.+ . +++
T Consensus 87 ~~~~~~~g~~~~~~~----------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~ 156 (347)
T KOG1198|consen 87 VVGGWVHGDAVVAFL----------SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLS 156 (347)
T ss_pred cccceEeeeEEeecc----------CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccC
Confidence 445567777666554 57999999999999999999999999999999999999999964 6 699
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD 222 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~ 222 (327)
+|++|||+||+|++|++++|+|++. ++..++++++++++++++++|+|+++|+++.++.+.. .++|+||||+|.
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~-~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~ 235 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHA-GAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGG 235 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhc-CCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCC
Confidence 9999999999999999999999999 6889999999999999999999999999998777654 369999999986
Q ss_pred c--hhhhhhhcCCCcEEEeeCCC---CCCc----------------------eeeEEeecCHHHHHHHHhHHHCCCceee
Q 020320 223 C--KNSFVVAKDNAPIVDITWPP---SHPR----------------------AIYSSLTVSGEILEKLRPFIESGKLKAQ 275 (327)
Q Consensus 223 ~--~~~~~~l~~~g~~v~~g~~~---~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 275 (327)
. ...+.++...|+...++... .... .....+....+.++.+.++++.+++++.
T Consensus 236 ~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~ 315 (347)
T KOG1198|consen 236 STLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPV 315 (347)
T ss_pred CccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCC
Confidence 4 55667777777644443211 0000 0111223457889999999999999886
Q ss_pred eCCCcccchhhHHHHHHHHHhCCCCceEEEEeC
Q 020320 276 IDPTGPYKFKDVIEAFRYLETGRARGKVVISAF 308 (327)
Q Consensus 276 ~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~ 308 (327)
+ -+.||++++++|++.+.++...||+++++.
T Consensus 316 i--~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 316 I--DSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred c--ceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 4 689999999999999999999999999874
No 78
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=8.4e-34 Score=254.81 Aligned_cols=296 Identities=23% Similarity=0.323 Sum_probs=233.4
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||+++++.+++++++++++.|.|.+++++|+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 89999999987667999999999999999999999999999999988776532 335788999999999999 467899
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh---cCCC-CCCEEEEEc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT---AGFK-TGQTIFIVG 156 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~---~~~~-~~~~vlI~g 156 (327)
+||+|++..... +....|+|++|++++.++++++|+++++++++.+++.+.++|+++.. .++. .+++|+|+|
T Consensus 79 ~Gd~V~~~~~~~----g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g 154 (325)
T cd05280 79 EGDEVLVTGYDL----GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTG 154 (325)
T ss_pred CCCEEEEccccc----CCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEEC
Confidence 999999864210 11236899999999999999999999999999999999999998853 3335 357999999
Q ss_pred CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC--hhhhc--cCccEEEeCCCC--chhhhhhh
Q 020320 157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK--YEDIE--EKFDVLYDTIGD--CKNSFVVA 230 (327)
Q Consensus 157 a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~--~~~d~v~d~~g~--~~~~~~~l 230 (327)
++|.+|++++++|+.+ |++++++++++++++.++++|++++++.+... ..... +++|+++|++|. ....++++
T Consensus 155 ~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l 233 (325)
T cd05280 155 ATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQT 233 (325)
T ss_pred CccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHhh
Confidence 8899999999999999 99998899999999999999999988765421 11111 469999999985 37788999
Q ss_pred cCCCcEEEeeCCCCCC-----cee-eEEe--------ecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320 231 KDNAPIVDITWPPSHP-----RAI-YSSL--------TVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR 292 (327)
Q Consensus 231 ~~~g~~v~~g~~~~~~-----~~~-~~~~--------~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~ 292 (327)
+++|+++.+|.....+ ... .... ... .+.++.+.+++..+...+ +...|++++++++++
T Consensus 234 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~ 310 (325)
T cd05280 234 KYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLEI---VVREISLEELPEAID 310 (325)
T ss_pred cCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCccc---eeeEecHHHHHHHHH
Confidence 9999999998543211 001 1111 111 133455555666663332 468999999999999
Q ss_pred HHHhCCCCceEEEEe
Q 020320 293 YLETGRARGKVVISA 307 (327)
Q Consensus 293 ~~~~~~~~gk~vv~~ 307 (327)
.+.++...+|+++++
T Consensus 311 ~~~~~~~~gk~vv~~ 325 (325)
T cd05280 311 RLLAGKHRGRTVVKI 325 (325)
T ss_pred HHhcCCcceEEEEeC
Confidence 999998889998864
No 79
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1e-33 Score=255.39 Aligned_cols=296 Identities=28% Similarity=0.404 Sum_probs=238.3
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++.+++. +++.+.|.|++.+++|+||+.++++|+.|+....+.++. .+|.++|+|++|+|+++|++++++++
T Consensus 1 ~~a~~~~~~~~---~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYEGPGE---LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEecCCCc---eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCC
Confidence 89999998874 899999999999999999999999999999988776542 37789999999999999999999999
Q ss_pred CCEEEEecccc----ccc-------------CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320 82 GDEVYGNIQDF----NAE-------------GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA 144 (327)
Q Consensus 82 Gd~V~~~~~~~----~~~-------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 144 (327)
||+|++..... ..| .+....|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++...
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~ 155 (334)
T cd08234 77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGLDLL 155 (334)
T ss_pred CCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHHHhc
Confidence 99998832111 000 01124689999999999999999999999988765 6677899988778
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh----hccCccEEEeC
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED----IEEKFDVLYDT 219 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~~~~~d~v~d~ 219 (327)
++.++++++|+| +|.+|.+++++|+++ |++ ++++++++++.+.++++|++.+++.+..++.. ..+++|+++|+
T Consensus 156 ~~~~g~~vlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~ 233 (334)
T cd08234 156 GIKPGDSVLVFG-AGPIGLLLAQLLKLN-GASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEA 233 (334)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEEC
Confidence 999999999997 799999999999998 887 67777888899999999998888766554322 12479999999
Q ss_pred CCC---chhhhhhhcCCCcEEEeeCCCCCC-c----------e-eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccch
Q 020320 220 IGD---CKNSFVVAKDNAPIVDITWPPSHP-R----------A-IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKF 284 (327)
Q Consensus 220 ~g~---~~~~~~~l~~~g~~v~~g~~~~~~-~----------~-~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 284 (327)
+|. ....+++++++|+++.+|...... . . .........+.+++++++++++++.+...+..+|++
T Consensus 234 ~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 313 (334)
T cd08234 234 TGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSHRLPL 313 (334)
T ss_pred CCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEEEecH
Confidence 974 267789999999999987543210 0 0 111122345778999999999998754334678999
Q ss_pred hhHHHHHHHHHhCCCCceEEE
Q 020320 285 KDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 285 ~~i~~a~~~~~~~~~~gk~vv 305 (327)
++++++++.+.+ ...+|+++
T Consensus 314 ~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 314 EEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHhc-CCceEEEe
Confidence 999999999988 77788876
No 80
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=7.9e-34 Score=254.20 Aligned_cols=294 Identities=29% Similarity=0.434 Sum_probs=240.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++..++....+++.+.+.|.+.+++|+||+.++++|++|+....+..+...+|.++|||++|+|+++|+ .++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 7999998887666788888888889999999999999999999998877655455678899999999999995 57999
Q ss_pred CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCCch
Q 020320 82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGG 160 (327)
Q Consensus 82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~ 160 (327)
||+|+++..+. +....|+|++|+.++..+++++|+++++++++.++.++.+||+++.. ..+.+|++|+|+|++|.
T Consensus 79 Gd~V~~~~~~~----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~ 154 (320)
T cd08243 79 GQRVATAMGGM----GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSS 154 (320)
T ss_pred CCEEEEecCCC----CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCCh
Confidence 99999875311 11235899999999999999999999999999999999999999864 67899999999998999
Q ss_pred HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh----ccCccEEEeCCCCc--hhhhhhhcCCC
Q 020320 161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI----EEKFDVLYDTIGDC--KNSFVVAKDNA 234 (327)
Q Consensus 161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~~~~d~v~d~~g~~--~~~~~~l~~~g 234 (327)
+|++++++|+++ |++++.++.++++.+.+.++|++++++.. .++... .+++|+++|++|+. ...+.+++++|
T Consensus 155 ~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g 232 (320)
T cd08243 155 VGLAALKLAKAL-GATVTATTRSPERAALLKELGADEVVIDD-GAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRPGG 232 (320)
T ss_pred HHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEecC-ccHHHHHHHhCCCceEEEECCChHHHHHHHHHhccCC
Confidence 999999999999 99999888899999999999998887543 233221 24799999999853 67789999999
Q ss_pred cEEEeeCCCCC-------Cc-------eee-EEe---ecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHh
Q 020320 235 PIVDITWPPSH-------PR-------AIY-SSL---TVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLET 296 (327)
Q Consensus 235 ~~v~~g~~~~~-------~~-------~~~-~~~---~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~ 296 (327)
+++.+|..... .. ... ... ......++.++++++++.+++. +++.|+++++++|++.+.+
T Consensus 233 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~ 310 (320)
T cd08243 233 IVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMES 310 (320)
T ss_pred EEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHh
Confidence 99998753110 00 000 111 1123467889999999998763 5788999999999999998
Q ss_pred CCCCceEEE
Q 020320 297 GRARGKVVI 305 (327)
Q Consensus 297 ~~~~gk~vv 305 (327)
+...+|+++
T Consensus 311 ~~~~~kvvv 319 (320)
T cd08243 311 NRAFGKVVV 319 (320)
T ss_pred CCCCCcEEe
Confidence 888888875
No 81
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.6e-33 Score=254.43 Aligned_cols=300 Identities=29% Similarity=0.425 Sum_probs=245.4
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..++.+. +.+.+.|.|.+.+++|+|++.++++|++|+....+.++ ...+|.++|+|++|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 8999999888765 68888999999999999999999999999998877664 344578899999999999999999999
Q ss_pred CCCEEEEeccc------------cccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-
Q 020320 81 TGDEVYGNIQD------------FNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK- 142 (327)
Q Consensus 81 ~Gd~V~~~~~~------------~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~- 142 (327)
+||+|++.... .+.| .+....|+|++|+.++.+.++++|+++++.+++.++..+.+||+++.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~ 159 (338)
T cd08254 80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR 159 (338)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence 99999873210 0011 01123589999999999999999999999999999999999999985
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh-----ccCccEEE
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI-----EEKFDVLY 217 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-----~~~~d~v~ 217 (327)
...+.+++++||.| +|.+|++++++|+.+ |.++++++.++++.+.++++|.+++++..+...... .+++|+++
T Consensus 160 ~~~~~~~~~vli~g-~g~vG~~~~~la~~~-G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vi 237 (338)
T cd08254 160 AGEVKPGETVLVIG-LGGLGLNAVQIAKAM-GAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIF 237 (338)
T ss_pred ccCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEE
Confidence 46799999999976 799999999999999 999888889999999999999998887665544321 24799999
Q ss_pred eCCCC---chhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320 218 DTIGD---CKNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYK 283 (327)
Q Consensus 218 d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 283 (327)
|++|. ...++++++++|+++.++....... .+........+.+..++++++++.+++. .+.++
T Consensus 238 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~~~ 314 (338)
T cd08254 238 DFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ---VETRP 314 (338)
T ss_pred ECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc---ceeEc
Confidence 99974 3678999999999999875321110 1111122336788999999999999864 57899
Q ss_pred hhhHHHHHHHHHhCCCCceEEEEe
Q 020320 284 FKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 284 ~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+++++++++.+.++...+|+++++
T Consensus 315 ~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 315 LDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHHHHcCCccceEEEeC
Confidence 999999999999999889999864
No 82
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=3.7e-34 Score=256.68 Aligned_cols=290 Identities=20% Similarity=0.301 Sum_probs=227.2
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||+++++++++ +++++.|.|++++++|+||+.++++|++|+....+.++ +|.++|||++|+|+++|++ +++
T Consensus 1 ~~a~~~~~~~~---~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLDGGLD---LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEeCCCc---EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCC
Confidence 79999987654 99999999999999999999999999999998877543 5778999999999999998 679
Q ss_pred CCEEEEeccc------------ccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320 82 GDEVYGNIQD------------FNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT 143 (327)
Q Consensus 82 Gd~V~~~~~~------------~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~ 143 (327)
||+|...... +..|.+ ....|+|++|++++.++++++|++++.++++.+ ..+.++|.+++.
T Consensus 72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~~~ 150 (319)
T cd08242 72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEILEQ 150 (319)
T ss_pred CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHHHh
Confidence 9999753211 011111 023689999999999999999999999888863 334467777778
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC-
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD- 222 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~- 222 (327)
.+++++++++|+| +|.+|++++++|+.+ |+++++++.++++.+.++++|++.+++.+.. ....++|+++|++|.
T Consensus 151 ~~~~~g~~vlV~g-~g~vg~~~~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~vid~~g~~ 225 (319)
T cd08242 151 VPITPGDKVAVLG-DGKLGLLIAQVLALT-GPDVVLVGRHSEKLALARRLGVETVLPDEAE---SEGGGFDVVVEATGSP 225 (319)
T ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---ccCCCCCEEEECCCCh
Confidence 8999999999997 899999999999999 9998888888999999999999888765432 122479999999975
Q ss_pred --chhhhhhhcCCCcEEEeeCCCCCCc-e----eeEEeecCH---HHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320 223 --CKNSFVVAKDNAPIVDITWPPSHPR-A----IYSSLTVSG---EILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR 292 (327)
Q Consensus 223 --~~~~~~~l~~~g~~v~~g~~~~~~~-~----~~~~~~~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~ 292 (327)
...++.+++++|+++..+....... . ......+.+ ..+++++++++++++++...+++.|+++++++||+
T Consensus 226 ~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~ 305 (319)
T cd08242 226 SGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFE 305 (319)
T ss_pred HHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHH
Confidence 3677889999999998664321110 0 011111111 24888999999999964334578999999999999
Q ss_pred HHHhCCCCceEEEEe
Q 020320 293 YLETGRARGKVVISA 307 (327)
Q Consensus 293 ~~~~~~~~gk~vv~~ 307 (327)
.+.++. .+|+++++
T Consensus 306 ~~~~~~-~~k~vi~~ 319 (319)
T cd08242 306 RAAEPG-ALKVLLRP 319 (319)
T ss_pred HHhcCC-ceEEEeCC
Confidence 998665 47988763
No 83
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.3e-34 Score=257.91 Aligned_cols=298 Identities=19% Similarity=0.243 Sum_probs=232.3
Q ss_pred ceeEEecccCCCcceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..+++ +++.+.|.|.+ +++||+||+.++++|++|+..+.+.++ ...|.++|||++|+|+++|+++++++
T Consensus 1 m~~~~~~~~~~---~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEecCCc---eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccC
Confidence 89999987765 99999999986 999999999999999999988877654 34578999999999999999999999
Q ss_pred CCCEEEE-eccccc-----------ccC-----cCCCCCceeeEEEeecc--ceecCCCCCCHHhhc-----ccchHHHH
Q 020320 81 TGDEVYG-NIQDFN-----------AEG-----KLKQLGALAEFIVVEES--LIAKKPKNISFEEAA-----SLPLAVQT 136 (327)
Q Consensus 81 ~Gd~V~~-~~~~~~-----------~~~-----~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa-----~~~~~~~t 136 (327)
+||+|++ +..... .|. +...+|+|++|+.++.+ .++++|+++++..+. .+...+.+
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~ 156 (345)
T cd08287 77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGT 156 (345)
T ss_pred CCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHH
Confidence 9999987 322111 111 11235899999999874 999999999873221 12256788
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----
Q 020320 137 AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE----- 210 (327)
Q Consensus 137 a~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----- 210 (327)
||+++...++.++++++|.| +|.+|++++++|+++ |++ ++++.+++++.+.++++|++++++.+...+.+.+
T Consensus 157 a~~~~~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~ 234 (345)
T cd08287 157 GHHAAVSAGVRPGSTVVVVG-DGAVGLCAVLAAKRL-GAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTG 234 (345)
T ss_pred HHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcC
Confidence 99998878899999999976 899999999999999 887 4454467778888899999999988765554422
Q ss_pred -cCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCC-Cce----------eeEEeecCHHHHHHHHhHHHCCCceee
Q 020320 211 -EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSH-PRA----------IYSSLTVSGEILEKLRPFIESGKLKAQ 275 (327)
Q Consensus 211 -~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~-~~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~ 275 (327)
.++|+++|++|+ ...++++++++|+++.++..... ... +........+.++++++++.++++++.
T Consensus 235 ~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (345)
T cd08287 235 GVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRINPG 314 (345)
T ss_pred CCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCCCHH
Confidence 369999999974 37788999999999998754411 100 011112235778999999999999864
Q ss_pred eCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 276 IDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 276 ~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
...++.+++++++++++.+.+.... |++++
T Consensus 315 ~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 315 RVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred HhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 4446889999999999998776554 88875
No 84
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.1e-33 Score=256.87 Aligned_cols=293 Identities=38% Similarity=0.620 Sum_probs=237.4
Q ss_pred ceeEEecccCCC-cceEEeeccCCCC-CCCeEEEEEEEEeeChHhHhhhcCCCC---------------CCCCCCccccc
Q 020320 2 QNAWYYEEYGPK-EVLKLGDFPLPTP-QHDQLLVQVRAAALNPIDSKRRQRPLF---------------PSDFPAVPGCD 64 (327)
Q Consensus 2 ~~~~v~~~~~~~-~~l~~~~~~~p~~-~~~eVlV~v~~~~i~~~d~~~~~~~~~---------------~~~~p~~~G~e 64 (327)
||++++.+++++ +.+++++.+.|.| .+++|+||+.++++|++|++...+... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 899999988875 3588999999999 599999999999999999998776311 23457899999
Q ss_pred ccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-h
Q 020320 65 MAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-T 143 (327)
Q Consensus 65 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~ 143 (327)
++|+|+.+|++++++++||+|+++... ...|+|++|++++.++++++|++++++.++.++..+.++|+++. .
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~ 153 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNV 153 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC-------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHh
Confidence 999999999999999999999987421 13589999999999999999999999999999999999999985 4
Q ss_pred cCCC----CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEE
Q 020320 144 AGFK----TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVL 216 (327)
Q Consensus 144 ~~~~----~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v 216 (327)
..+. +|++++|+|++|++|++++++++++ |+++++++++ ++.+.++++|.+++++.....+... .+++|++
T Consensus 154 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~v 231 (350)
T cd08248 154 GGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAW-GAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI 231 (350)
T ss_pred ccCCCccCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEE
Confidence 5554 4999999999999999999999999 9988777654 5778889999988887665444332 2579999
Q ss_pred EeCCCCc--hhhhhhhcCCCcEEEeeCCCCCCc---ee----e----------------------EEeecCHHHHHHHHh
Q 020320 217 YDTIGDC--KNSFVVAKDNAPIVDITWPPSHPR---AI----Y----------------------SSLTVSGEILEKLRP 265 (327)
Q Consensus 217 ~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~~~---~~----~----------------------~~~~~~~~~~~~~~~ 265 (327)
+|++|.. ..++.+++++|+++.++....... .. + .......+.+.++++
T Consensus 232 i~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (350)
T cd08248 232 LDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAK 311 (350)
T ss_pred EECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHH
Confidence 9999853 678899999999999874321100 00 0 001123567889999
Q ss_pred HHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 266 FIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 266 l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
++.++.+.+. +++.|++++++++|+.+.++...+|+++
T Consensus 312 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 312 LVEDGKIKPV--IDKVFPFEEVPEAYEKVESGHARGKTVI 349 (350)
T ss_pred HHhCCCEecc--cceeecHHHHHHHHHHHhcCCCceEEEe
Confidence 9999998753 5789999999999999988877778775
No 85
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=9.9e-34 Score=256.43 Aligned_cols=297 Identities=26% Similarity=0.378 Sum_probs=236.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++++++. +.+++.+.|++.++||+||+.++++|++|+....+.+ ....|.++|+|++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~---l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTGPGD---LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEecCCc---eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence 89999998764 8999999999999999999999999999998887754 2335778999999999999999999999
Q ss_pred CCEEEEeccc-ccc-----------c-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320 82 GDEVYGNIQD-FNA-----------E-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA 144 (327)
Q Consensus 82 Gd~V~~~~~~-~~~-----------~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 144 (327)
||+|+++... ... | .+....|+|++|+.++.++++++|+++++++++.+ ..+.++|+++...
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~~~ 155 (343)
T cd08236 77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVRLA 155 (343)
T ss_pred CCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHHhc
Confidence 9999987321 011 1 11124689999999999999999999999999877 5678999999878
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hc--cCccEEEe
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYED---IE--EKFDVLYD 218 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~--~~~d~v~d 218 (327)
.+.++++|+|+| +|.+|++++++|+.+ |++ ++++++++++.++++++|++.+++.+.....+ .. +++|+++|
T Consensus 156 ~~~~~~~vlI~g-~g~~g~~~~~lA~~~-G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vld 233 (343)
T cd08236 156 GITLGDTVVVIG-AGTIGLLAIQWLKIL-GAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIE 233 (343)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCCEEEE
Confidence 899999999997 799999999999999 987 77777888888888999999888776544221 11 35999999
Q ss_pred CCCC---chhhhhhhcCCCcEEEeeCCCCCC--------------ceeeEEeec-----CHHHHHHHHhHHHCCCceeee
Q 020320 219 TIGD---CKNSFVVAKDNAPIVDITWPPSHP--------------RAIYSSLTV-----SGEILEKLRPFIESGKLKAQI 276 (327)
Q Consensus 219 ~~g~---~~~~~~~l~~~g~~v~~g~~~~~~--------------~~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~ 276 (327)
++|. ...++++++++|+++.+|...... ..+...... ..+.++++++++.++.+.+..
T Consensus 234 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 313 (343)
T cd08236 234 AAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEP 313 (343)
T ss_pred CCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHH
Confidence 9974 367889999999999987443210 001111111 156788999999999986322
Q ss_pred CCCcccchhhHHHHHHHHHh-CCCCceEEE
Q 020320 277 DPTGPYKFKDVIEAFRYLET-GRARGKVVI 305 (327)
Q Consensus 277 ~~~~~~~~~~i~~a~~~~~~-~~~~gk~vv 305 (327)
.....+++++++++++.+.+ ....+|+|+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 314 LITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred heeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 24578999999999999988 566678763
No 86
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=3.4e-33 Score=252.09 Aligned_cols=296 Identities=33% Similarity=0.515 Sum_probs=240.8
Q ss_pred ceeEEecccCCCc---ceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCC
Q 020320 2 QNAWYYEEYGPKE---VLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTK 78 (327)
Q Consensus 2 ~~~~v~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 78 (327)
||+++++.+++++ .+.+.++|.|.+.+++|+||+.++++|++|++...+..+...+|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 7999999998875 5888889999999999999999999999999887776543446778999999999999999999
Q ss_pred CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCC-----CCEE
Q 020320 79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKT-----GQTI 152 (327)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~-----~~~v 152 (327)
+++||+|+++.. ....|+|++|+.++.++++++|++++.++++.+++.+.++|+++ ....+.+ ++++
T Consensus 81 ~~~Gd~V~~~~~-------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~v 153 (336)
T cd08252 81 FKVGDEVYYAGD-------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTL 153 (336)
T ss_pred CCCCCEEEEcCC-------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEE
Confidence 999999998631 01358999999999999999999999999999999999999997 4577777 9999
Q ss_pred EEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCC---c
Q 020320 153 FIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD---C 223 (327)
Q Consensus 153 lI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~---~ 223 (327)
+|+|++|.+|++++++++.+ | .++++++.++++.++++++|++++++.+. .+.... +++|+++|++|. .
T Consensus 154 lV~g~~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~~~ 231 (336)
T cd08252 154 LIIGGAGGVGSIAIQLAKQL-TGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQHW 231 (336)
T ss_pred EEEcCCchHHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHHHH
Confidence 99998999999999999999 8 99999989999999999999999887664 332211 479999999974 3
Q ss_pred hhhhhhhcCCCcEEEeeCCCC---------CCceeeEE-ee-----------cCHHHHHHHHhHHHCCCceeeeC-CCcc
Q 020320 224 KNSFVVAKDNAPIVDITWPPS---------HPRAIYSS-LT-----------VSGEILEKLRPFIESGKLKAQID-PTGP 281 (327)
Q Consensus 224 ~~~~~~l~~~g~~v~~g~~~~---------~~~~~~~~-~~-----------~~~~~~~~~~~l~~~g~~~~~~~-~~~~ 281 (327)
..++.+++++|+++.+|.... ....+... .. ...+.++++++++.+|.+++... ....
T Consensus 232 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 311 (336)
T cd08252 232 DAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGP 311 (336)
T ss_pred HHHHHHhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecC
Confidence 778899999999999875320 00011110 00 01245788999999999986421 1246
Q ss_pred cchhhHHHHHHHHHhCCCCceEEEE
Q 020320 282 YKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 282 ~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
+++++++++++.+.++...+|++++
T Consensus 312 ~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 312 INAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred CCHHHHHHHHHHHHcCCccceEEeC
Confidence 8999999999999988888888864
No 87
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.5e-33 Score=253.32 Aligned_cols=291 Identities=30% Similarity=0.440 Sum_probs=228.5
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++..++ .+.+++.+.+.|+++++||+||+.++++|++|++.+.+ +....+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKK 78 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCC
Confidence 8999998777 55699999998899999999999999999999988764 222235778999999999999999999999
Q ss_pred CCEEEEecc------------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320 82 GDEVYGNIQ------------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA 144 (327)
Q Consensus 82 Gd~V~~~~~------------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 144 (327)
||+|+++.. ..+.|. +....|+|++|++++.+.++++|+++++++++.++.++.+||+++...
T Consensus 79 Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~ 158 (325)
T cd08264 79 GDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTA 158 (325)
T ss_pred CCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHhc
Confidence 999997631 111121 112468999999999999999999999999999999999999999778
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCC--ChhhhccCccEEEeCCCC
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKT--KYEDIEEKFDVLYDTIGD 222 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~~d~v~d~~g~ 222 (327)
+++++++++|+|++|.+|++++++|+++ |.+++++++ .+.++++|++++++.++. ......+++|++++++|.
T Consensus 159 ~~~~g~~vlI~g~~g~vg~~~~~~a~~~-G~~v~~~~~----~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~ 233 (325)
T cd08264 159 GLGPGETVVVFGASGNTGIFAVQLAKMM-GAEVIAVSR----KDWLKEFGADEVVDYDEVEEKVKEITKMADVVINSLGS 233 (325)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeH----HHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEECCCH
Confidence 8999999999998899999999999999 888877753 367788999888865431 111112679999999985
Q ss_pred c--hhhhhhhcCCCcEEEeeCCCCC--Cce----------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320 223 C--KNSFVVAKDNAPIVDITWPPSH--PRA----------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI 288 (327)
Q Consensus 223 ~--~~~~~~l~~~g~~v~~g~~~~~--~~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~ 288 (327)
. ..++++++++|+++.+|..... ... +........+.++++++++.+.++. +.+.|++++++
T Consensus 234 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~ 309 (325)
T cd08264 234 SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKVK----VWKTFKLEEAK 309 (325)
T ss_pred HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCce----eEEEEcHHHHH
Confidence 3 6788999999999998853211 100 1111112246888999999655432 25789999999
Q ss_pred HHHHHHHhCCCCceE
Q 020320 289 EAFRYLETGRARGKV 303 (327)
Q Consensus 289 ~a~~~~~~~~~~gk~ 303 (327)
+|++.+.++...+|+
T Consensus 310 ~a~~~~~~~~~~~kv 324 (325)
T cd08264 310 EALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHcCCCcccc
Confidence 999999877766664
No 88
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=2.4e-33 Score=251.68 Aligned_cols=288 Identities=26% Similarity=0.356 Sum_probs=237.1
Q ss_pred EecccCCCc--ceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320 6 YYEEYGPKE--VLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFNTG 82 (327)
Q Consensus 6 v~~~~~~~~--~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 82 (327)
++++++.+. .+++++.|.|++.+++|+||+.++++|+.|+..+.+.+. ...+|.++|||++|+|+.+|++++++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~G 81 (323)
T cd05282 2 VYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVG 81 (323)
T ss_pred eeCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCC
Confidence 345566554 688999999999999999999999999999988876543 23467889999999999999999999999
Q ss_pred CEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchH
Q 020320 83 DEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGV 161 (327)
Q Consensus 83 d~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~ 161 (327)
|+|+++. ..|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++. ...+.++++++|+|++|.+
T Consensus 82 d~V~~~~----------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~v 151 (323)
T cd05282 82 QRVLPLG----------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAV 151 (323)
T ss_pred CEEEEeC----------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHH
Confidence 9999974 1589999999999999999999999999988889999999985 5678999999999988999
Q ss_pred HHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCC
Q 020320 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDN 233 (327)
Q Consensus 162 G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~ 233 (327)
|++++++|+++ |++++++++++++.+.++++|++++++.++..+...+ +++|+++|++|+. ...+++++++
T Consensus 152 g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~ 230 (323)
T cd05282 152 GRMLIQLAKLL-GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPG 230 (323)
T ss_pred HHHHHHHHHHC-CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCC
Confidence 99999999999 9999999999999999999999999887664444322 4799999999853 6678999999
Q ss_pred CcEEEeeCCCCCC----------cee-eEEeec-------C----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHH
Q 020320 234 APIVDITWPPSHP----------RAI-YSSLTV-------S----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAF 291 (327)
Q Consensus 234 g~~v~~g~~~~~~----------~~~-~~~~~~-------~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~ 291 (327)
|+++.+|.....+ ... +..... . .+.++++++++.++.+.+. .++.|++++++++|
T Consensus 231 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~ 308 (323)
T cd05282 231 GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAV 308 (323)
T ss_pred CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHHH
Confidence 9999887442211 001 011111 1 2457889999999998753 47889999999999
Q ss_pred HHHHhCCCCceEEEE
Q 020320 292 RYLETGRARGKVVIS 306 (327)
Q Consensus 292 ~~~~~~~~~gk~vv~ 306 (327)
+.+.++...+|++++
T Consensus 309 ~~~~~~~~~~kvv~~ 323 (323)
T cd05282 309 AAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHhcCCCCceEeeC
Confidence 999988888888863
No 89
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=2.8e-33 Score=251.35 Aligned_cols=294 Identities=22% Similarity=0.326 Sum_probs=234.3
Q ss_pred eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
|++++...+.+++++++++|.|.+.+++|+||+.++++|++|++.+.+.++. ..+|.++|||++|+|+. +++..+++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 6888888887778999999999999999999999999999999988776532 34688899999999988 56778999
Q ss_pred CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH---hcCCCCCC-EEEEEcC
Q 020320 82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK---TAGFKTGQ-TIFIVGG 157 (327)
Q Consensus 82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~---~~~~~~~~-~vlI~ga 157 (327)
||+|+++.... +.+..|++++|++++.++++++|+++++++++.++..+.++|+++. ...+.+++ +++|+|+
T Consensus 79 Gd~V~~~~~~~----~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~ 154 (323)
T TIGR02823 79 GDEVIVTGYGL----GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGA 154 (323)
T ss_pred CCEEEEccCCC----CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcC
Confidence 99999874211 1123689999999999999999999999999999888888888763 34588898 9999998
Q ss_pred CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh-hhc--cCccEEEeCCCC--chhhhhhhcC
Q 020320 158 AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE-DIE--EKFDVLYDTIGD--CKNSFVVAKD 232 (327)
Q Consensus 158 ~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~-~~~--~~~d~v~d~~g~--~~~~~~~l~~ 232 (327)
+|.+|++++++|+++ |++++++++++++.+.++++|++++++.++.... ... .++|+++|++|. ....+.++++
T Consensus 155 ~g~vg~~~~~la~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~ 233 (323)
T TIGR02823 155 TGGVGSLAVAILSKL-GYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQLKY 233 (323)
T ss_pred CcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHhCC
Confidence 899999999999999 9999988888888899999999988876543321 111 358999999984 3678899999
Q ss_pred CCcEEEeeCCCCCCc----------eee-EEee---cC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHH
Q 020320 233 NAPIVDITWPPSHPR----------AIY-SSLT---VS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYL 294 (327)
Q Consensus 233 ~g~~v~~g~~~~~~~----------~~~-~~~~---~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~ 294 (327)
+|+++.+|.....+. ... .... .. .+.++.+.+++..+.+.+. .+.|+++++++||+.+
T Consensus 234 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~a~~~~ 310 (323)
T TIGR02823 234 GGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI---TREITLEELPEALEQI 310 (323)
T ss_pred CCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc---eeeecHHHHHHHHHHH
Confidence 999999985431111 000 1110 11 2345667777778877642 4689999999999999
Q ss_pred HhCCCCceEEEE
Q 020320 295 ETGRARGKVVIS 306 (327)
Q Consensus 295 ~~~~~~gk~vv~ 306 (327)
.++...+|+++.
T Consensus 311 ~~~~~~~k~vv~ 322 (323)
T TIGR02823 311 LAGQHRGRTVVD 322 (323)
T ss_pred hCCCccceEEEe
Confidence 999888899875
No 90
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.2e-32 Score=248.60 Aligned_cols=303 Identities=33% Similarity=0.432 Sum_probs=244.7
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..++.+..+++.+.+.|.+.+++|+||+.++++|++|++.+.+..+ ...+|.++|||++|+|+.+|+++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 8999998666666688988888889999999999999999999998877543 234578899999999999999999999
Q ss_pred CCCEEEEecc------------cccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-H
Q 020320 81 TGDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-K 142 (327)
Q Consensus 81 ~Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~ 142 (327)
+||+|++... ..+.|.. ....|++++|++++.+.++++|+++++.+++.+++++.++|+++ +
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~ 160 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT 160 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence 9999998621 1222222 12468899999999999999999999999999999999999997 4
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEE
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVL 216 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v 216 (327)
..++.++++++|+|+++.+|++++++++.+ |.+++.+++++++.+.+..++.+.+++....++...+ +++|++
T Consensus 161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 239 (342)
T cd08266 161 RARLRPGETVLVHGAGSGVGSAAIQIAKLF-GATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVV 239 (342)
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEE
Confidence 688899999999998899999999999998 9999888888888888888888877765554433321 369999
Q ss_pred EeCCCC--chhhhhhhcCCCcEEEeeCCCCCCce------------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCccc
Q 020320 217 YDTIGD--CKNSFVVAKDNAPIVDITWPPSHPRA------------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPY 282 (327)
Q Consensus 217 ~d~~g~--~~~~~~~l~~~g~~v~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 282 (327)
++++|. ....+++++++|+++.++........ +..........+.+++++++++.+.+. +++.|
T Consensus 240 i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~ 317 (342)
T cd08266 240 VEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPV--IDSVF 317 (342)
T ss_pred EECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccc--eeeeE
Confidence 999984 36788999999999998754321110 111112234678899999999998753 57889
Q ss_pred chhhHHHHHHHHHhCCCCceEEEEe
Q 020320 283 KFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 283 ~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
++++++++++.+.++...+|+++.+
T Consensus 318 ~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 318 PLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999999999998888888998753
No 91
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=3.2e-33 Score=251.23 Aligned_cols=298 Identities=20% Similarity=0.307 Sum_probs=226.7
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC-CCCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL-FPSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..+++++++.+++.|.|.+.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.| +++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 899999998877789999999999999999999999999999987654211 123458889999999999964 57799
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh---cCCC-CCCEEEEEc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT---AGFK-TGQTIFIVG 156 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~---~~~~-~~~~vlI~g 156 (327)
+||+|++..... +....|+|++|++++.+.++++|+++++++++.+++++.|||+++.. .... .+++|+|+|
T Consensus 79 ~Gd~V~~~~~~~----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g 154 (326)
T cd08289 79 PGDEVIVTSYDL----GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTG 154 (326)
T ss_pred CCCEEEEccccc----CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEc
Confidence 999999875211 11246899999999999999999999999999999999999988742 3333 478999999
Q ss_pred CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh--h--ccCccEEEeCCCCc--hhhhhhh
Q 020320 157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED--I--EEKFDVLYDTIGDC--KNSFVVA 230 (327)
Q Consensus 157 a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~--~~~~d~v~d~~g~~--~~~~~~l 230 (327)
++|.+|++++++|+++ |++++++++++++++.++++|++++++.++..... . .+++|+++|++|.. ...+.++
T Consensus 155 ~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l 233 (326)
T cd08289 155 ATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTL 233 (326)
T ss_pred CCchHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHHh
Confidence 8899999999999999 99999899999999999999999888765432111 1 14699999999843 6788999
Q ss_pred cCCCcEEEeeCCCCCCce------------eeEE-eecC-HHHHHHHHhHHHCCCcee---eeCCCcccchhhHHHHHHH
Q 020320 231 KDNAPIVDITWPPSHPRA------------IYSS-LTVS-GEILEKLRPFIESGKLKA---QIDPTGPYKFKDVIEAFRY 293 (327)
Q Consensus 231 ~~~g~~v~~g~~~~~~~~------------~~~~-~~~~-~~~~~~~~~l~~~g~~~~---~~~~~~~~~~~~i~~a~~~ 293 (327)
+++|+++.+|........ +... .... ......+++.+.. .+.+ ....++.|+++++++||+.
T Consensus 234 ~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~ 312 (326)
T cd08289 234 QYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQ 312 (326)
T ss_pred hcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHH
Confidence 999999999854211100 0111 0111 1122233333322 2221 0123789999999999999
Q ss_pred HHhCCCCceEEEEe
Q 020320 294 LETGRARGKVVISA 307 (327)
Q Consensus 294 ~~~~~~~gk~vv~~ 307 (327)
+.++...+|+++++
T Consensus 313 ~~~~~~~gkvvv~~ 326 (326)
T cd08289 313 ILQGRVTGRTVVKL 326 (326)
T ss_pred HhcCcccceEEEeC
Confidence 99998889998763
No 92
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.7e-32 Score=247.31 Aligned_cols=301 Identities=33% Similarity=0.437 Sum_probs=244.9
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++...+..+.+++.+.+.|.+++++++|++.++++|++|++...+.++ ...+|.++|||++|+|+++|+++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 8999999876556699999888889999999999999999999998877653 234678899999999999999999999
Q ss_pred CCCEEEEeccc------cccc-----CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCC
Q 020320 81 TGDEVYGNIQD------FNAE-----GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKT 148 (327)
Q Consensus 81 ~Gd~V~~~~~~------~~~~-----~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~ 148 (327)
+||+|++.... +..| .+.+..|+|++|+.++.++++++|+++++.+++.++..+.+||+++. ...+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 160 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKP 160 (336)
T ss_pred CCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCC
Confidence 99999986410 1111 11223688999999999999999999999999999999999999985 578999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC-CChhhhc------cCccEEEeCCC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK-TKYEDIE------EKFDVLYDTIG 221 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~------~~~d~v~d~~g 221 (327)
|++++|+| +|++|++++++++++ |+++++++.++++.+.+.++|.+++++... .++...+ +++|+++|+++
T Consensus 161 g~~vli~g-~g~~g~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 238 (336)
T cd08276 161 GDTVLVQG-TGGVSLFALQFAKAA-GARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGG 238 (336)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCC
Confidence 99999996 899999999999999 999999889989999998899999887665 4443322 47999999987
Q ss_pred C--chhhhhhhcCCCcEEEeeCCCCCCc----------e--eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhH
Q 020320 222 D--CKNSFVVAKDNAPIVDITWPPSHPR----------A--IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDV 287 (327)
Q Consensus 222 ~--~~~~~~~l~~~g~~v~~g~~~~~~~----------~--~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i 287 (327)
. ...++.+++++|+++.+|....... . +........+.+++++++++++.+.+. .++.|+++++
T Consensus 239 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~ 316 (336)
T cd08276 239 PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPV--IDRVFPFEEA 316 (336)
T ss_pred hHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccc--cCcEEeHHHH
Confidence 4 3678899999999999875432110 0 111111235678999999999888754 4688999999
Q ss_pred HHHHHHHHhCCCCceEEEE
Q 020320 288 IEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 288 ~~a~~~~~~~~~~gk~vv~ 306 (327)
+++|+.+.++...+|++++
T Consensus 317 ~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 317 KEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred HHHHHHHHhCCCCceEEEe
Confidence 9999999988888898875
No 93
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=8.6e-33 Score=249.88 Aligned_cols=296 Identities=21% Similarity=0.318 Sum_probs=229.4
Q ss_pred EecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhc-CCCCC--CCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320 6 YYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQ-RPLFP--SDFPAVPGCDMAGIVVAKGTSVTKFNTG 82 (327)
Q Consensus 6 v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~-~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~G 82 (327)
+++.++. +.+.+.|.|.+++++|+||+.++++|++|+...+ +.++. ..+|.++|||++|+|+++|++++++++|
T Consensus 2 ~~~~~~~---~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~G 78 (339)
T cd08232 2 VIHAAGD---LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPG 78 (339)
T ss_pred eeccCCc---eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCC
Confidence 4555554 9999999999999999999999999999998763 32221 2357789999999999999999999999
Q ss_pred CEEEEecc-cc-----------cccCc----------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHH
Q 020320 83 DEVYGNIQ-DF-----------NAEGK----------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG 140 (327)
Q Consensus 83 d~V~~~~~-~~-----------~~~~~----------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~ 140 (327)
|+|++... .+ +.|.. ....|+|++|++++.++++++|+++++++++. +.++.++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~ 157 (339)
T cd08232 79 QRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHA 157 (339)
T ss_pred CEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHH
Confidence 99987421 01 11111 01468999999999999999999999998875 5677889999
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh---ccCccEE
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI---EEKFDVL 216 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v 216 (327)
+......++++|+|.| +|.+|++++++|+++ |. ++++++.++++.++++++|++++++.+...+... ..++|++
T Consensus 158 l~~~~~~~~~~VLI~g-~g~vG~~~~~lak~~-G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~v 235 (339)
T cd08232 158 VNRAGDLAGKRVLVTG-AGPIGALVVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVV 235 (339)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEE
Confidence 8654444999999977 799999999999999 88 6777777888888889999999887665433222 2359999
Q ss_pred EeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc---------eee-EEeecCHHHHHHHHhHHHCCCceeeeCCCcccc
Q 020320 217 YDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR---------AIY-SSLTVSGEILEKLRPFIESGKLKAQIDPTGPYK 283 (327)
Q Consensus 217 ~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~---------~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 283 (327)
+|+.|. ....+++++++|+++.++....... ... .......+.+++++++++++.+++.....+.|+
T Consensus 236 ld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 315 (339)
T cd08232 236 FEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFP 315 (339)
T ss_pred EECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEec
Confidence 999984 3678899999999999875331100 000 111133567889999999999875444568899
Q ss_pred hhhHHHHHHHHHhCCCCceEEEEe
Q 020320 284 FKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 284 ~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+++++++++.+.++...+|+|+.+
T Consensus 316 ~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 316 LEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHHhCCCceeEEEeC
Confidence 999999999998888889999864
No 94
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2e-32 Score=245.54 Aligned_cols=297 Identities=41% Similarity=0.666 Sum_probs=241.9
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||+++++.++.++.+.+++.+.|.+.+++|+|++.++++|++|+....+.+. ....|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 8999999988777788988888889999999999999999999988776542 233477899999999999999999999
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAG 159 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g 159 (327)
+||+|+++..+.. ...|+|++|+.++..+++++|+++++..++.++..+.+||+++ +..++.++++++|+|++|
T Consensus 81 ~Gd~V~~~~~~~~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~ 155 (326)
T cd08272 81 VGDEVYGCAGGLG-----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAG 155 (326)
T ss_pred CCCEEEEccCCcC-----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC
Confidence 9999998753211 1358899999999999999999999999998899999999997 568899999999999999
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK 231 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~ 231 (327)
.+|++++++++.+ |.+++.++++ ++.+.++++|.+.+++.... +.+.+ +++|+++|++|+. ...+.+++
T Consensus 156 ~~g~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~ 232 (326)
T cd08272 156 GVGHVAVQLAKAA-GARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVA 232 (326)
T ss_pred cHHHHHHHHHHHc-CCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhc
Confidence 9999999999999 9999888877 88888888999888876554 44322 3699999998753 66789999
Q ss_pred CCCcEEEeeCCCCCC------cee-eEEee-----c-------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHH
Q 020320 232 DNAPIVDITWPPSHP------RAI-YSSLT-----V-------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFR 292 (327)
Q Consensus 232 ~~g~~v~~g~~~~~~------~~~-~~~~~-----~-------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~ 292 (327)
++|+++.++.....+ ... +.... . ..+.+..+++++.++.+.+.+.+ +.|++++++++|+
T Consensus 233 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~ 311 (326)
T cd08272 233 LYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDP-RTFPLEEAAAAHA 311 (326)
T ss_pred cCCEEEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccc-ceecHHHHHHHHH
Confidence 999999886432100 011 11111 1 14568889999999998754322 8899999999999
Q ss_pred HHHhCCCCceEEEEe
Q 020320 293 YLETGRARGKVVISA 307 (327)
Q Consensus 293 ~~~~~~~~gk~vv~~ 307 (327)
.+.++...+|+++++
T Consensus 312 ~~~~~~~~~~vv~~~ 326 (326)
T cd08272 312 RLESGSARGKIVIDV 326 (326)
T ss_pred HHHcCCcccEEEEEC
Confidence 998888788998753
No 95
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=1.7e-32 Score=244.08 Aligned_cols=293 Identities=42% Similarity=0.662 Sum_probs=241.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK 78 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 78 (327)
||+++++.++..+.+.+.+.+.|.+++++|+||+.++++|++|+..+.+... ...+|..+|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 8999999888766678888888889999999999999999999998876542 3345888999999999999999999
Q ss_pred CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcC
Q 020320 79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGG 157 (327)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga 157 (327)
+++||+|+++... ...|+|++|+.++..+++++|+++++..++.++..+.++++++.. ..+.++++++|+|+
T Consensus 81 ~~~G~~V~~~~~~-------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~ 153 (309)
T cd05289 81 FKVGDEVFGMTPF-------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGA 153 (309)
T ss_pred CCCCCEEEEccCC-------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecC
Confidence 9999999987410 125899999999999999999999999999889899999999865 55899999999998
Q ss_pred CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh--hccCccEEEeCCCCc--hhhhhhhcCC
Q 020320 158 AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED--IEEKFDVLYDTIGDC--KNSFVVAKDN 233 (327)
Q Consensus 158 ~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~~~~~d~v~d~~g~~--~~~~~~l~~~ 233 (327)
+|.+|++++++++.. |.++++++.++ +.+.++++|.+.+++....++.. ..+++|++++++|+. ..++.+++++
T Consensus 154 ~g~~g~~~~~~a~~~-g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~ 231 (309)
T cd05289 154 AGGVGSFAVQLAKAR-GARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKPG 231 (309)
T ss_pred CchHHHHHHHHHHHc-CCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhcC
Confidence 899999999999998 99988888777 88888889988888766544432 224699999999854 7788999999
Q ss_pred CcEEEeeCCCCCCc-----e-eeEEeecC--HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 234 APIVDITWPPSHPR-----A-IYSSLTVS--GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 234 g~~v~~g~~~~~~~-----~-~~~~~~~~--~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
|+++.+|....... . ......+. .+.+.+++++++++.+.+. +++.|++++++++|+.+.++...+|+++
T Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 232 GRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPV--VDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cEEEEEcCCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEe--eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 99999875433211 1 11111122 6788999999999998754 5789999999999999988877777763
No 96
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.9e-32 Score=246.75 Aligned_cols=296 Identities=26% Similarity=0.362 Sum_probs=239.2
Q ss_pred eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTG 82 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 82 (327)
|+++++++|. .+++.+.|.|.+.+++|+|++.++++|++|+..+.+.+....+|.++|||++|+|+++|++++++++|
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~G 78 (330)
T cd08245 1 KAAVVHAAGG--PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVG 78 (330)
T ss_pred CeEEEecCCC--CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccC
Confidence 6888988854 39999999999999999999999999999999988766444568889999999999999999999999
Q ss_pred CEEEEec-----c--------cccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhc
Q 020320 83 DEVYGNI-----Q--------DFNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTA 144 (327)
Q Consensus 83 d~V~~~~-----~--------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 144 (327)
|+|+... + ..+.|. .....|+|++|+.++.++++++|+++++.+++.++..+.+||+++...
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~~ 158 (330)
T cd08245 79 DRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDA 158 (330)
T ss_pred CEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHhh
Confidence 9998421 1 111121 112468999999999999999999999999998988999999999778
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh-hccCccEEEeCCCC-
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED-IEEKFDVLYDTIGD- 222 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~~~d~v~d~~g~- 222 (327)
++.++++++|+| +|.+|++++++|+.+ |.+++++++++++.+.++++|++.+++........ ..+++|+++++++.
T Consensus 159 ~~~~~~~vlI~g-~g~iG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 236 (330)
T cd08245 159 GPRPGERVAVLG-IGGLGHLAVQYARAM-GFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSG 236 (330)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEECCCcH
Confidence 899999999997 788999999999999 99999989999999999999998888765433322 22479999999764
Q ss_pred --chhhhhhhcCCCcEEEeeCCCCCCce------------eeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHH
Q 020320 223 --CKNSFVVAKDNAPIVDITWPPSHPRA------------IYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVI 288 (327)
Q Consensus 223 --~~~~~~~l~~~g~~v~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~ 288 (327)
...++++++++|+++.++........ +..........++++++++.++.+.+. .+.|++++++
T Consensus 237 ~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~ 313 (330)
T cd08245 237 AAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPM---IETFPLDQAN 313 (330)
T ss_pred HHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcce---EEEEcHHHHH
Confidence 36788999999999998753211110 111111145778899999999998753 4789999999
Q ss_pred HHHHHHHhCCCCceEEE
Q 020320 289 EAFRYLETGRARGKVVI 305 (327)
Q Consensus 289 ~a~~~~~~~~~~gk~vv 305 (327)
++|+.+.++...+|+++
T Consensus 314 ~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 314 EAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHcCCCCcceeC
Confidence 99999998888888764
No 97
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=7.5e-33 Score=232.03 Aligned_cols=279 Identities=25% Similarity=0.306 Sum_probs=227.6
Q ss_pred cceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEe--CCCCCCCCCCCEEEEeccc
Q 020320 14 EVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAK--GTSVTKFNTGDEVYGNIQD 91 (327)
Q Consensus 14 ~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~v--G~~v~~~~~Gd~V~~~~~~ 91 (327)
+.+++++.++|.+++||||||+.|.+++|..+..++- .+..-.|+-+|...+|.++.. -|+...|++||.|...
T Consensus 25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d-~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~--- 100 (340)
T COG2130 25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSD-APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV--- 100 (340)
T ss_pred CCceeEeccCCCCCcCceEEEEEEeccCHHHeecccC-CcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec---
Confidence 5599999999999999999999999999976655433 234456788888877644443 3567889999999986
Q ss_pred ccccCcCCCCCceeeEEEeeccceecCCCCCCHHhh--cccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHH
Q 020320 92 FNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEA--ASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQL 168 (327)
Q Consensus 92 ~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a--a~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~l 168 (327)
.+|++|..++.+.+.++++..-+..+ ..+..+..|||.+|. .+.+++|++|+|.+|+|++|..+.|+
T Consensus 101 ----------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQi 170 (340)
T COG2130 101 ----------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQI 170 (340)
T ss_pred ----------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHH
Confidence 48999999999999999865433333 245667789999995 68999999999999999999999999
Q ss_pred HHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhhhcCCCcEEEee
Q 020320 169 AKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 169 a~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g 240 (327)
||.. |+++|.+..+++|..++++ +|.|.++|++.+++.+.+ .++|+.||++|+. +..+..|+.++|+..+|
T Consensus 171 AKlk-G~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG 249 (340)
T COG2130 171 AKLK-GCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCG 249 (340)
T ss_pred HHhh-CCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeee
Confidence 9988 9999999999999999987 999999999999988865 5899999999864 78889999999999987
Q ss_pred CCC-C----CC---ce----------eeEEe------ecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHh
Q 020320 241 WPP-S----HP---RA----------IYSSL------TVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLET 296 (327)
Q Consensus 241 ~~~-~----~~---~~----------~~~~~------~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~ 296 (327)
.-. . .+ .. +...+ ....+.++++.+|+++|+|+... +.+-+++++++||..|.+
T Consensus 250 ~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~ 327 (340)
T COG2130 250 AISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLS 327 (340)
T ss_pred ehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhc
Confidence 421 0 11 00 00111 11246788999999999999876 556689999999999999
Q ss_pred CCCCceEEEEeCC
Q 020320 297 GRARGKVVISAFP 309 (327)
Q Consensus 297 ~~~~gk~vv~~~~ 309 (327)
+++.||.|+++.+
T Consensus 328 G~N~GK~vvKv~~ 340 (340)
T COG2130 328 GKNFGKLVVKVAD 340 (340)
T ss_pred CCccceEEEEecC
Confidence 9999999999753
No 98
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.5e-32 Score=248.57 Aligned_cols=298 Identities=25% Similarity=0.359 Sum_probs=227.8
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVTK 78 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~ 78 (327)
||++++.++++ .+++.+.|.|.+.++||+||+.++++|++|++++.+.. ....+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~ 78 (341)
T PRK05396 1 MKALVKLKAEP--GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG 78 (341)
T ss_pred CceEEEecCCC--ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence 79999988774 49999999999999999999999999999998765532 12246778999999999999999999
Q ss_pred CCCCCEEEEecc------------cccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320 79 FNTGDEVYGNIQ------------DFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF 141 (327)
Q Consensus 79 ~~~Gd~V~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 141 (327)
+++||+|++... ..+.|.. .+..|+|++|+.++.++++++|+++++.+++.+ ..+.++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~ 157 (341)
T PRK05396 79 FKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTA 157 (341)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHH
Confidence 999999998621 1122211 124689999999999999999999999888743 4555566655
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCcc
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFD 214 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d 214 (327)
.. ...+|++++|.| +|.+|++++++|+++ |++ ++++..++++.+.++++|++++++.++.++.+.+ +++|
T Consensus 158 ~~-~~~~g~~vlV~~-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (341)
T PRK05396 158 LS-FDLVGEDVLITG-AGPIGIMAAAVAKHV-GARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFD 234 (341)
T ss_pred Hc-CCCCCCeEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCC
Confidence 33 346899999987 799999999999998 884 6666678888899999999999887765554432 4799
Q ss_pred EEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEe-ecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320 215 VLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSL-TVSGEILEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 215 ~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~ 279 (327)
++||+.|. ...++.+++++|+++.+|...... ..+.... ....+.+..+++++.++ ++....+.
T Consensus 235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 313 (341)
T PRK05396 235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPIIT 313 (341)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHheE
Confidence 99999874 367889999999999998543110 0011111 01124456788899888 43222346
Q ss_pred cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 280 GPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+.|+++++++||+.+.++. .+|+++++
T Consensus 314 ~~~~l~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 314 HRFPIDDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred EEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence 8899999999999998776 78999865
No 99
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=3.5e-32 Score=244.28 Aligned_cols=296 Identities=23% Similarity=0.316 Sum_probs=235.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..+|+++.+++++.|.|++++++|+||+.++++|++|+....+.++ ...+|.++|||++|+|+. +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 8999999988777799999999999999999999999999999998877542 234578899999999998 7778899
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH---hcCCC-CCCEEEEEc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK---TAGFK-TGQTIFIVG 156 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~---~~~~~-~~~~vlI~g 156 (327)
+||+|+++.. +. +....|+|++|++++.++++++|++++.++++.++..++++++++. ..+.. ++++++|+|
T Consensus 79 ~Gd~V~~~~~--~~--~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g 154 (324)
T cd08288 79 PGDRVVLTGW--GV--GERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTG 154 (324)
T ss_pred CCCEEEECCc--cC--CCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEEC
Confidence 9999998631 00 0113689999999999999999999999999999888888887764 44555 678999999
Q ss_pred CCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh--hhc-cCccEEEeCCCC--chhhhhhhc
Q 020320 157 GAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE--DIE-EKFDVLYDTIGD--CKNSFVVAK 231 (327)
Q Consensus 157 a~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~~~-~~~d~v~d~~g~--~~~~~~~l~ 231 (327)
++|.+|++++++|+++ |+++++++.++++.+.++++|++++++.++.... ... .++|.++|+++. ....+..++
T Consensus 155 a~g~vg~~~~~~A~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 233 (324)
T cd08288 155 AAGGVGSVAVALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQTR 233 (324)
T ss_pred CCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHHhc
Confidence 8899999999999999 9999999999999999999999999887653221 111 357899999985 256677888
Q ss_pred CCCcEEEeeCCCCC--C--------ceee-EEe---e----cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHH
Q 020320 232 DNAPIVDITWPPSH--P--------RAIY-SSL---T----VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRY 293 (327)
Q Consensus 232 ~~g~~v~~g~~~~~--~--------~~~~-~~~---~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~ 293 (327)
.+|+++.+|..... + .... ... . ...+.++.+++++.++.+++. .+.+++++++++|+.
T Consensus 234 ~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~a~~~ 310 (324)
T cd08288 234 YGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL---TREIPLADVPDAAEA 310 (324)
T ss_pred CCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc---ceeecHHHHHHHHHH
Confidence 88999888753210 0 0000 111 0 113457778888888888652 589999999999999
Q ss_pred HHhCCCCceEEEEe
Q 020320 294 LETGRARGKVVISA 307 (327)
Q Consensus 294 ~~~~~~~gk~vv~~ 307 (327)
+.+++..+|+++.+
T Consensus 311 ~~~~~~~~~vvv~~ 324 (324)
T cd08288 311 ILAGQVRGRVVVDV 324 (324)
T ss_pred HhcCCccCeEEEeC
Confidence 99999889998763
No 100
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2e-32 Score=247.95 Aligned_cols=294 Identities=27% Similarity=0.392 Sum_probs=229.4
Q ss_pred EEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCC-CC--CCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 5 WYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRP-LF--PSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 5 ~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~-~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
.++++++. +.+++.|.|.+.+++|+||+.++++|++|++.+.+. .+ ...+|.++|+|++|+|+++|++++++++
T Consensus 2 ~~~~~~~~---~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~ 78 (343)
T cd05285 2 AVLHGPGD---LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV 78 (343)
T ss_pred ceEecCCc---eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCC
Confidence 45666644 999999999999999999999999999999876422 11 1245778999999999999999999999
Q ss_pred CCEEEEecc------------cccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh
Q 020320 82 GDEVYGNIQ------------DFNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT 143 (327)
Q Consensus 82 Gd~V~~~~~------------~~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~ 143 (327)
||+|++.+. ..+.|.. ....|+|++|++++.++++++|+++++.+++.+ ..+.+||+++..
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~~~ 157 (343)
T cd05285 79 GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHACRR 157 (343)
T ss_pred CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHHHh
Confidence 999986321 1111110 113689999999999999999999999998866 467789999878
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCCh---hh----hc--cCc
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKY---ED----IE--EKF 213 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~----~~--~~~ 213 (327)
++++++++++|.| +|.+|++++++|+++ |++ ++++.+++++.++++++|++++++.+...+ .+ .. +++
T Consensus 158 ~~~~~g~~vlI~g-~g~vG~~a~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd05285 158 AGVRPGDTVLVFG-AGPIGLLTAAVAKAF-GATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGP 235 (343)
T ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence 9999999999987 799999999999998 887 777778888999999999999988766543 22 11 359
Q ss_pred cEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEeecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320 214 DVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSLTVSGEILEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 214 d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 279 (327)
|+++|++|. ....+.+++++|+++.+|....... .+.. .....+.++.++++++++.+.+.....
T Consensus 236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~ 314 (343)
T cd05285 236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRG-VFRYANTYPTAIELLASGKVDVKPLIT 314 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEE-eccChHHHHHHHHHHHcCCCCchHhEE
Confidence 999999985 3678899999999999875432110 1111 112236788999999999876433346
Q ss_pred cccchhhHHHHHHHHHhCC-CCceEEE
Q 020320 280 GPYKFKDVIEAFRYLETGR-ARGKVVI 305 (327)
Q Consensus 280 ~~~~~~~i~~a~~~~~~~~-~~gk~vv 305 (327)
+.|+++++++|++.+.++. ..+|+++
T Consensus 315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 315 HRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 7899999999999998775 4589887
No 101
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.1e-32 Score=245.34 Aligned_cols=288 Identities=28% Similarity=0.407 Sum_probs=237.1
Q ss_pred eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
|++++...+.++.+++.+.+.|.+.+++|+|++.++++|++|+....+..+. ..+|.++|||++|+|+.+|++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 7899999888878999999999999999999999999999999988776532 346889999999999999999999999
Q ss_pred CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCch
Q 020320 82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGG 160 (327)
Q Consensus 82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~ 160 (327)
||+|.++. ..|+|++|++++.+.++++|+++++.+++.++..+.++|+++. ...+.++++++|+|++|.
T Consensus 82 Gd~V~~~~----------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ 151 (331)
T cd08273 82 GDRVAALT----------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGG 151 (331)
T ss_pred CCEEEEeC----------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcH
Confidence 99999975 2489999999999999999999999999999999999999985 478999999999998899
Q ss_pred HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hccCccEEEeCCCCc--hhhhhhhcCCCc
Q 020320 161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED---IEEKFDVLYDTIGDC--KNSFVVAKDNAP 235 (327)
Q Consensus 161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~~~d~v~d~~g~~--~~~~~~l~~~g~ 235 (327)
+|++++++++.+ |++++.++. +++.+.++++|++.+ +....++.. ..+++|++++++|+. ..++.+++++|+
T Consensus 152 ig~~~~~~a~~~-g~~v~~~~~-~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~ 228 (331)
T cd08273 152 VGQALLELALLA-GAEVYGTAS-ERNHAALRELGATPI-DYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGT 228 (331)
T ss_pred HHHHHHHHHHHc-CCEEEEEeC-HHHHHHHHHcCCeEE-cCCCcchhhhhccCCCceEEEECCchHHHHHHHHHhcCCCE
Confidence 999999999998 998888887 888888888997643 333322221 124799999999854 677899999999
Q ss_pred EEEeeCCCCCCc-------------------ee------e-EEeec--------CHHHHHHHHhHHHCCCceeeeCCCcc
Q 020320 236 IVDITWPPSHPR-------------------AI------Y-SSLTV--------SGEILEKLRPFIESGKLKAQIDPTGP 281 (327)
Q Consensus 236 ~v~~g~~~~~~~-------------------~~------~-~~~~~--------~~~~~~~~~~l~~~g~~~~~~~~~~~ 281 (327)
++.+|.....+. .. . ..... ..+.+++++++++++.+.+. .++.
T Consensus 229 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~--~~~~ 306 (331)
T cd08273 229 LVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK--IAKR 306 (331)
T ss_pred EEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC--cceE
Confidence 999875432111 00 0 01111 13567889999999998753 5788
Q ss_pred cchhhHHHHHHHHHhCCCCceEEE
Q 020320 282 YKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 282 ~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
|++++++++|+.+.++...+|+|+
T Consensus 307 ~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 307 LPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred EcHHHHHHHHHHHHcCCCcceEEe
Confidence 999999999999988888888875
No 102
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=5.1e-32 Score=242.22 Aligned_cols=291 Identities=32% Similarity=0.490 Sum_probs=239.1
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++.+++.++.+++.+.+.|.+.+++|+||+.++++|++|+....+.++ ...+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 8999999888777788988888889999999999999999999988876552 334678899999999999999999999
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG 159 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g 159 (327)
+||+|+++. ..|+|++|+.++.++++++|+++++.+++.++..+.++|+++. ...+.++++++|+|++|
T Consensus 81 ~Gd~V~~~~----------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~ 150 (323)
T cd05276 81 VGDRVCALL----------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGAS 150 (323)
T ss_pred CCCEEEEec----------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcC
Confidence 999999874 2589999999999999999999999999999999999999985 57889999999999999
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK 231 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~ 231 (327)
.+|++++++++.+ |++++++.+++++.+.++++|.+.+++....++.... +++|+++++.|.. ...+.+++
T Consensus 151 ~ig~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~ 229 (323)
T cd05276 151 GVGTAAIQLAKAL-GARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALA 229 (323)
T ss_pred hHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhc
Confidence 9999999999999 9998888888888888888998888876654443322 4799999999853 66788999
Q ss_pred CCCcEEEeeCCCCCC--c----------eeeEEe-ec---------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHH
Q 020320 232 DNAPIVDITWPPSHP--R----------AIYSSL-TV---------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIE 289 (327)
Q Consensus 232 ~~g~~v~~g~~~~~~--~----------~~~~~~-~~---------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~ 289 (327)
++|+++.++...... . .+.... .. ....+.++++++.++++.+. .++.|+++++++
T Consensus 230 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 307 (323)
T cd05276 230 PDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEAAE 307 (323)
T ss_pred cCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHH
Confidence 999999887532111 0 001110 00 11345778889999988653 578899999999
Q ss_pred HHHHHHhCCCCceEEE
Q 020320 290 AFRYLETGRARGKVVI 305 (327)
Q Consensus 290 a~~~~~~~~~~gk~vv 305 (327)
+++.+.++...+|+++
T Consensus 308 a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 308 AHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHhCCCcceEeC
Confidence 9999988887788763
No 103
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.5e-32 Score=246.13 Aligned_cols=299 Identities=26% Similarity=0.372 Sum_probs=230.5
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVTK 78 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~ 78 (327)
||+++++.++. .+.+.+.+.|.+.+++++||+.++++|++|+..+.+.. ....+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~ 78 (341)
T cd05281 1 MKAIVKTKAGP--GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR 78 (341)
T ss_pred CcceEEecCCC--ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence 89999998774 49999999999999999999999999999988754421 12235678999999999999999999
Q ss_pred CCCCCEEEEeccc------------ccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH
Q 020320 79 FNTGDEVYGNIQD------------FNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF 141 (327)
Q Consensus 79 ~~~Gd~V~~~~~~------------~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 141 (327)
+++||+|+++... .+.|.. ....|+|++|++++.+.++++|++++.+.+ .++..+.++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~ 157 (341)
T cd05281 79 VKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTV 157 (341)
T ss_pred CCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHH
Confidence 9999999986211 111100 113689999999999999999999988554 5566777888877
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hc--cCccE
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKTKYED---IE--EKFDV 215 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~--~~~d~ 215 (327)
. ....++++|+|.| +|.+|++++++|+.+ |. +++++.+++++...++++|++++++.+..++.. .. +++|+
T Consensus 158 ~-~~~~~g~~vlV~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~ 234 (341)
T cd05281 158 L-AGDVSGKSVLITG-CGPIGLMAIAVAKAA-GASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDV 234 (341)
T ss_pred H-hcCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCE
Confidence 5 4557899999987 799999999999998 88 576666788888888999999888766555431 11 47999
Q ss_pred EEeCCCCc---hhhhhhhcCCCcEEEeeCCCCCCc------ee----eEE-e--ecCHHHHHHHHhHHHCCCceeeeCCC
Q 020320 216 LYDTIGDC---KNSFVVAKDNAPIVDITWPPSHPR------AI----YSS-L--TVSGEILEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 216 v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~~~~------~~----~~~-~--~~~~~~~~~~~~l~~~g~~~~~~~~~ 279 (327)
+||++|.. ...+.+++++|+++.+|....... .. ... . ....+.+.++++++.++.+.+...+.
T Consensus 235 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 314 (341)
T cd05281 235 VLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVIT 314 (341)
T ss_pred EEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheE
Confidence 99999743 677899999999998874321100 00 000 0 11235678899999999987543456
Q ss_pred cccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 280 GPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 280 ~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+.+++++++++|+.+.++. .+|+++.+
T Consensus 315 ~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 315 HKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred EEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 7889999999999999888 89998764
No 104
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=6.2e-32 Score=246.55 Aligned_cols=298 Identities=22% Similarity=0.300 Sum_probs=225.3
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTK 78 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 78 (327)
|++.++..+.. +++++.+.|.+.++||+||+.++++|++|++.+.+... ...+|.++|||++|+|+++|+++++
T Consensus 18 ~~~~~~~~~~~---l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 18 NMAAWLVGVNT---LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cceEEEecCCc---eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 45555555544 88999999999999999999999999999998866321 1235778999999999999999999
Q ss_pred CCCCCEEEEecc------------cccccCc------CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHH
Q 020320 79 FNTGDEVYGNIQ------------DFNAEGK------LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEG 140 (327)
Q Consensus 79 ~~~Gd~V~~~~~------------~~~~~~~------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~ 140 (327)
+++||+|++... ..+.|.. .+..|+|++|+.++.+.++++|++++++++++. ..+.++|++
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~ 173 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHA 173 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHH
Confidence 999999987321 1122211 112689999999999999999999999988752 233348888
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcE-EEEeCCcccHHHHHHcCCCEEEeCC--CCChhhh--------
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASH-VVATTSTPKVEFVKELGADKVIDYR--KTKYEDI-------- 209 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~-v~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~-------- 209 (327)
+...++.++++++|+| +|++|++++++|+++ |++. +++..++++.++++++|++.+++.. ..++.+.
T Consensus 174 ~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T PLN02702 174 CRRANIGPETNVLVMG-AGPIGLVTMLAARAF-GAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAM 251 (364)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhc
Confidence 8778899999999997 799999999999998 8864 4555677888889999999877543 2333221
Q ss_pred ccCccEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC-----------ceeeEEeecCHHHHHHHHhHHHCCCceee
Q 020320 210 EEKFDVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP-----------RAIYSSLTVSGEILEKLRPFIESGKLKAQ 275 (327)
Q Consensus 210 ~~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 275 (327)
.+++|+++|++|. ...++++++++|+++.+|...... ..+... ......++.++++++++++.+.
T Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~l~~~ 330 (364)
T PLN02702 252 GGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGV-FRYRNTWPLCLEFLRSGKIDVK 330 (364)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEe-ccChHHHHHHHHHHHcCCCCch
Confidence 1369999999984 378899999999999987532110 011111 1224578899999999998643
Q ss_pred eCCCcccch--hhHHHHHHHHHhCCCCceEEEE
Q 020320 276 IDPTGPYKF--KDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 276 ~~~~~~~~~--~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
..+++.|++ +++++|++.+.+++..+|+++.
T Consensus 331 ~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 331 PLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 334577554 8999999999888878899884
No 105
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=1.2e-31 Score=240.17 Aligned_cols=298 Identities=31% Similarity=0.496 Sum_probs=243.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++..++.+..+.+.+.|.|.+.+++|+|++.++++|++|+....+.++ ...+|.++|||++|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 7899998877666688999999999999999999999999999988776543 335688899999999999999999999
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCCc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAG 159 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g 159 (327)
+||+|++...+. ....|++++|+.++.+.++++|+++++.+++.++.++.++|+++.. .++.++++++|+|+++
T Consensus 81 ~Gd~v~~~~~~~-----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~ 155 (325)
T cd08253 81 VGDRVWLTNLGW-----GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSG 155 (325)
T ss_pred CCCEEEEecccc-----CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCc
Confidence 999999875311 1136899999999999999999999999999999999999999864 8899999999999999
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK 231 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~ 231 (327)
.+|++++++++.+ |.+++++++++++.+.+.++|++++++....++.... +++|++++++|.. ...+++++
T Consensus 156 ~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~ 234 (325)
T cd08253 156 AVGHAAVQLARWA-GARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLA 234 (325)
T ss_pred hHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhC
Confidence 9999999999998 9999998888888888889999988877665544321 4799999999854 56778999
Q ss_pred CCCcEEEeeCCCC---C------C--ceeeEE--eecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHH
Q 020320 232 DNAPIVDITWPPS---H------P--RAIYSS--LTVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYL 294 (327)
Q Consensus 232 ~~g~~v~~g~~~~---~------~--~~~~~~--~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~ 294 (327)
++|+++.++.... . . ..+... .... .+.++.+.+++.++.+++. .++.|++++++++++.+
T Consensus 235 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~ 312 (325)
T cd08253 235 PGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAV 312 (325)
T ss_pred CCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHH
Confidence 9999999875320 0 0 001111 1111 2345667778888888653 47889999999999999
Q ss_pred HhCCCCceEEEEe
Q 020320 295 ETGRARGKVVISA 307 (327)
Q Consensus 295 ~~~~~~gk~vv~~ 307 (327)
.++...+|+++++
T Consensus 313 ~~~~~~~kvv~~~ 325 (325)
T cd08253 313 ESGGAIGKVVLDP 325 (325)
T ss_pred HcCCCcceEEEeC
Confidence 9888888988753
No 106
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=8.1e-32 Score=244.79 Aligned_cols=297 Identities=33% Similarity=0.513 Sum_probs=227.0
Q ss_pred eeEEecccCCCcceEEeeccCCC-CCCCeEEEEEEEEeeChHhHhhhcCCCCCC-CCCCcccccccEEEEEeCCCCC-CC
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPT-PQHDQLLVQVRAAALNPIDSKRRQRPLFPS-DFPAVPGCDMAGIVVAKGTSVT-KF 79 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~-~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~-~~p~~~G~e~~G~V~~vG~~v~-~~ 79 (327)
|++++..++.+..++..++|.|. +.+++|+||+.++++|++|+....+..... .+|.++|||++|+|+++|++++ ++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 68899888876334444445543 499999999999999999998775422211 2377899999999999999998 89
Q ss_pred CCCCEEEEecccccccCcCCCCCceeeEEEeecc----ceecCCCCCCHHhhcccchHHHHHHHHHHh-c-CCCCCCEEE
Q 020320 80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEES----LIAKKPKNISFEEAASLPLAVQTAIEGFKT-A-GFKTGQTIF 153 (327)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~-~~~~~~~vl 153 (327)
++||+|+++..... ...|+|++|++++.. .++++|+++++.+++.++.++.+||+++.. . ++++|++++
T Consensus 82 ~~Gd~V~~~~~~~~-----~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vl 156 (352)
T cd08247 82 KVGDEVCGIYPHPY-----GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVL 156 (352)
T ss_pred CCCCEEEEeecCCC-----CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEE
Confidence 99999998753211 136899999999987 789999999999999999999999999965 4 699999999
Q ss_pred EEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCC---h-hhh------ccCccEEEeCCCCc
Q 020320 154 IVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTK---Y-EDI------EEKFDVLYDTIGDC 223 (327)
Q Consensus 154 I~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~---~-~~~------~~~~d~v~d~~g~~ 223 (327)
|+|+++.+|++++++|+.+++.+.++.+.++++...++++|++++++.++.+ + .+. .+++|+++|++|..
T Consensus 157 I~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~ 236 (352)
T cd08247 157 VLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGY 236 (352)
T ss_pred EECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCH
Confidence 9999899999999999987455344444455666677899999988765544 2 221 24799999999862
Q ss_pred ---hhhhhhhc---CCCcEEEeeCCCC---CC-------------ceee-----EE-------eecCHHHHHHHHhHHHC
Q 020320 224 ---KNSFVVAK---DNAPIVDITWPPS---HP-------------RAIY-----SS-------LTVSGEILEKLRPFIES 269 (327)
Q Consensus 224 ---~~~~~~l~---~~g~~v~~g~~~~---~~-------------~~~~-----~~-------~~~~~~~~~~~~~l~~~ 269 (327)
..++++++ ++|+++.++.... .. ..+. .. .....+.++.+++++.+
T Consensus 237 ~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (352)
T cd08247 237 DLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIAD 316 (352)
T ss_pred HHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhC
Confidence 56788889 9999998642110 00 0000 00 00113568889999999
Q ss_pred CCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEEE
Q 020320 270 GKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVIS 306 (327)
Q Consensus 270 g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~ 306 (327)
+.+.+. +++.++++++++||+.+.++...+|++++
T Consensus 317 ~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 317 GKVKPP--IDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred CCeEee--eccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 998764 47899999999999999988888999875
No 107
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.3e-31 Score=238.80 Aligned_cols=294 Identities=34% Similarity=0.489 Sum_probs=239.0
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||++++.++++.+.+.+.+.|.|++.+++|+||+.++++|++|+....+......+|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 89999999884335999999999999999999999999999999887765533234778999999999999999999999
Q ss_pred CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCch
Q 020320 82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGG 160 (327)
Q Consensus 82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~ 160 (327)
||+|+++.. ....|+|++|+.++.+.++++|++++...++.++..+.++++++. ..++.+|++++|+|++|.
T Consensus 81 Gd~V~~~~~-------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ 153 (325)
T cd08271 81 GDRVAYHAS-------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGG 153 (325)
T ss_pred CCEEEeccC-------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccH
Confidence 999998741 112589999999999999999999999999989999999999985 578899999999998899
Q ss_pred HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh------ccCccEEEeCCCCc--hhhhhhhcC
Q 020320 161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI------EEKFDVLYDTIGDC--KNSFVVAKD 232 (327)
Q Consensus 161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~v~d~~g~~--~~~~~~l~~ 232 (327)
+|+++++++++. |++++.++ ++++.+.+.++|++.+++.....+... .+++|++++++++. ...+.++++
T Consensus 154 ig~~~~~~a~~~-g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~ 231 (325)
T cd08271 154 VGSFAVQLAKRA-GLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAF 231 (325)
T ss_pred HHHHHHHHHHHc-CCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhcc
Confidence 999999999998 99888776 667778888899988887665544332 14699999999853 567899999
Q ss_pred CCcEEEeeCCCCCC-------ceeeEEee--------------cCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHH
Q 020320 233 NAPIVDITWPPSHP-------RAIYSSLT--------------VSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAF 291 (327)
Q Consensus 233 ~g~~v~~g~~~~~~-------~~~~~~~~--------------~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~ 291 (327)
+|+++.++...... ...+.... ...+.+.++++++.++.+.+. .++.|+++++++++
T Consensus 232 ~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~ 309 (325)
T cd08271 232 NGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEAL 309 (325)
T ss_pred CCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHH
Confidence 99999886432110 00111111 112346778899999998753 46889999999999
Q ss_pred HHHHhCCCCceEEEE
Q 020320 292 RYLETGRARGKVVIS 306 (327)
Q Consensus 292 ~~~~~~~~~gk~vv~ 306 (327)
+.+.++...+|++++
T Consensus 310 ~~~~~~~~~~kiv~~ 324 (325)
T cd08271 310 RALKDRHTRGKIVVT 324 (325)
T ss_pred HHHHcCCccceEEEE
Confidence 999988888898875
No 108
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.7e-31 Score=238.55 Aligned_cols=291 Identities=32% Similarity=0.415 Sum_probs=239.1
Q ss_pred eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTG 82 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 82 (327)
|++.+..++....+.+.+.+.+.+.+++|+|++.++++|++|++...+..+. .+|.++|||++|+|+.+|++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 5777777777667888888888899999999999999999999888765432 457789999999999999999999999
Q ss_pred CEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchH
Q 020320 83 DEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGV 161 (327)
Q Consensus 83 d~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~ 161 (327)
|+|+++. ..|++++|+.++.+.++++|++++..+++.++..+.++|+++. ..++.++++++|+|++|.+
T Consensus 80 ~~V~~~~----------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~ 149 (320)
T cd05286 80 DRVAYAG----------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGV 149 (320)
T ss_pred CEEEEec----------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence 9999873 1589999999999999999999999999988888899999985 5889999999999999999
Q ss_pred HHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCC
Q 020320 162 GTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDN 233 (327)
Q Consensus 162 G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~ 233 (327)
|++++++++.+ |+++++++.++++.+.++++|++++++.....+...+ +++|++++++++. ...+.+++++
T Consensus 150 g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~ 228 (320)
T cd05286 150 GLLLTQWAKAL-GATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPR 228 (320)
T ss_pred HHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccC
Confidence 99999999999 9999998899899999999999988876654443322 3699999998743 6778999999
Q ss_pred CcEEEeeCCCCCC----------cee-eEEe-----ecC----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHH
Q 020320 234 APIVDITWPPSHP----------RAI-YSSL-----TVS----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRY 293 (327)
Q Consensus 234 g~~v~~g~~~~~~----------~~~-~~~~-----~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~ 293 (327)
|+++.+|...... ... +... ... .+.+.++++++.++.+.+. .++.|++++++++|+.
T Consensus 229 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~ 306 (320)
T cd05286 229 GTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRD 306 (320)
T ss_pred cEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHH
Confidence 9999987533110 000 1111 111 2445678889999988764 4688999999999999
Q ss_pred HHhCCCCceEEEEe
Q 020320 294 LETGRARGKVVISA 307 (327)
Q Consensus 294 ~~~~~~~gk~vv~~ 307 (327)
+.++...+++++.+
T Consensus 307 ~~~~~~~~~vv~~~ 320 (320)
T cd05286 307 LESRKTTGKLLLIP 320 (320)
T ss_pred HHcCCCCceEEEeC
Confidence 99888888988753
No 109
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=5.4e-32 Score=248.50 Aligned_cols=286 Identities=25% Similarity=0.344 Sum_probs=220.9
Q ss_pred eEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC------C-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEe
Q 020320 16 LKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL------F-PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGN 88 (327)
Q Consensus 16 l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~------~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 88 (327)
++++++|.|.+++++|+||+.++++|++|++.+.+.. + ...+|.++|||++|+|+++|++++.+++||+|++.
T Consensus 39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 118 (384)
T cd08265 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE 118 (384)
T ss_pred EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence 9999999999999999999999999999998876321 1 13467899999999999999999999999999873
Q ss_pred ccc------------ccccCc-----CCCCCceeeEEEeeccceecCCCCC-------CHHhhcccchHHHHHHHHHH-h
Q 020320 89 IQD------------FNAEGK-----LKQLGALAEFIVVEESLIAKKPKNI-------SFEEAASLPLAVQTAIEGFK-T 143 (327)
Q Consensus 89 ~~~------------~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~-------~~~~aa~~~~~~~ta~~~l~-~ 143 (327)
... .+.|.. ....|+|++|+.++.++++++|+++ +.. ++.++.++.+||+++. .
T Consensus 119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~ 197 (384)
T cd08265 119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR 197 (384)
T ss_pred CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence 211 111111 1236899999999999999999863 444 5556678889999984 4
Q ss_pred -cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCCEEEeCCCC---Chhhhc------cC
Q 020320 144 -AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGADKVIDYRKT---KYEDIE------EK 212 (327)
Q Consensus 144 -~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~------~~ 212 (327)
.++++|++|+|+| +|.+|++++++|+.+ |+ ++++++.++++.+.++++|++++++.++. ++...+ ++
T Consensus 198 ~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~g 275 (384)
T cd08265 198 GGGFRPGAYVVVYG-AGPIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWG 275 (384)
T ss_pred cCCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCC
Confidence 6899999999996 899999999999999 88 57777778889999999999998876643 333321 47
Q ss_pred ccEEEeCCCCc----hhhhhhhcCCCcEEEeeCCCCCCc-----------eeeEEe-ecCHHHHHHHHhHHHCCCceeee
Q 020320 213 FDVLYDTIGDC----KNSFVVAKDNAPIVDITWPPSHPR-----------AIYSSL-TVSGEILEKLRPFIESGKLKAQI 276 (327)
Q Consensus 213 ~d~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~~~~~-----------~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~ 276 (327)
+|+++|++|.. ...+++++++|+++.+|....... .+.... ......+++++++++++.+++..
T Consensus 276 vDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~ 355 (384)
T cd08265 276 ADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTK 355 (384)
T ss_pred CCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHH
Confidence 99999999852 567899999999999875421100 011111 11235689999999999998654
Q ss_pred CCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 277 DPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 277 ~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
+.++.|+++++++|++.+.+. ..+|+++
T Consensus 356 ~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 356 IITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred heEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 457889999999999997554 5677775
No 110
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=8e-32 Score=240.60 Aligned_cols=276 Identities=23% Similarity=0.311 Sum_probs=222.3
Q ss_pred ceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhh-cCCCCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEEeccc
Q 020320 15 VLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRR-QRPLFP--SDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQD 91 (327)
Q Consensus 15 ~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~-~~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 91 (327)
.+++.+.+.|.+.++||+||+.++++|++|+..+ .+.... ..+|.++|||++|+|+++|++++++++||+|+++.
T Consensus 6 ~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 83 (312)
T cd08269 6 RFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-- 83 (312)
T ss_pred eeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--
Confidence 4999999999999999999999999999999887 664321 22477899999999999999999999999999874
Q ss_pred ccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHh
Q 020320 92 FNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKH 171 (327)
Q Consensus 92 ~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~ 171 (327)
.|+|++|++++.++++++|+++ ..++....++.++++++...+++++++++|+| +|.+|++++++|++
T Consensus 84 ---------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~la~~ 151 (312)
T cd08269 84 ---------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIG-AGFIGLLFLQLAAA 151 (312)
T ss_pred ---------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH
Confidence 5899999999999999999988 22322236778899998888899999999997 79999999999999
Q ss_pred hcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC---chhhhhhhcCCCcEEEeeC
Q 020320 172 FYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD---CKNSFVVAKDNAPIVDITW 241 (327)
Q Consensus 172 ~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~g~ 241 (327)
+ |++ ++++.+++++.++++++|++++++.+...+.+.+ .++|+++|++|. ....+++++++|+++.+|.
T Consensus 152 ~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~ 230 (312)
T cd08269 152 A-GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGY 230 (312)
T ss_pred c-CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEcc
Confidence 9 998 7777788888888899999988876655544432 479999999974 3778899999999999975
Q ss_pred CCCCCc------------eeeEEe----ecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCC-CceEE
Q 020320 242 PPSHPR------------AIYSSL----TVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRA-RGKVV 304 (327)
Q Consensus 242 ~~~~~~------------~~~~~~----~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~-~gk~v 304 (327)
....+. .+.... ....+.+++++++++++++++.....+.|++++++++++.+.+++. ..|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 310 (312)
T cd08269 231 HQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGV 310 (312)
T ss_pred CCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEE
Confidence 431110 001111 1123678999999999999864334678999999999999988864 47877
Q ss_pred E
Q 020320 305 I 305 (327)
Q Consensus 305 v 305 (327)
+
T Consensus 311 ~ 311 (312)
T cd08269 311 I 311 (312)
T ss_pred e
Confidence 5
No 111
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.1e-31 Score=236.50 Aligned_cols=289 Identities=43% Similarity=0.671 Sum_probs=230.6
Q ss_pred EecccCCCcce--EEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC---CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 6 YYEEYGPKEVL--KLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF---PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 6 v~~~~~~~~~l--~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
+++..++++.+ ++.+.|.|++.+++|+|++.++++|++|++.+.+.++ ...+|..+|||++|+|+++|+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~ 81 (319)
T cd08267 2 VYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFK 81 (319)
T ss_pred eeCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCC
Confidence 56667776554 8889999999999999999999999999998876542 233567899999999999999999999
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCCc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAG 159 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g 159 (327)
+||+|+++... ...|+|++|+.++.+.++++|++++++.++.+++.+.+||+++.. ..+.++++++|+|++|
T Consensus 82 ~Gd~V~~~~~~-------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g 154 (319)
T cd08267 82 VGDEVFGRLPP-------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASG 154 (319)
T ss_pred CCCEEEEeccC-------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 99999987420 125899999999999999999999999999999999999999864 5689999999999889
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh---hccCccEEEeCCCCc----hhhhhhhcC
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED---IEEKFDVLYDTIGDC----KNSFVVAKD 232 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~~~d~v~d~~g~~----~~~~~~l~~ 232 (327)
.+|++++++|+.+ |++++.++.+ ++.+.++++|.+++++....++.. ..+++|++++++|.. ...+..+++
T Consensus 155 ~~g~~~~~la~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~ 232 (319)
T cd08267 155 GVGTFAVQIAKAL-GAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKP 232 (319)
T ss_pred HHHHHHHHHHHHc-CCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCC
Confidence 9999999999999 9988877765 788888999998888765544321 124699999999832 222334999
Q ss_pred CCcEEEeeCCCCCCce---------------ee-EEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHh
Q 020320 233 NAPIVDITWPPSHPRA---------------IY-SSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLET 296 (327)
Q Consensus 233 ~g~~v~~g~~~~~~~~---------------~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~ 296 (327)
+|+++.+|........ .. .......+.+.++++++.++.+.+. +++.|++++++++|+.+.+
T Consensus 233 ~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~a~~~~~~ 310 (319)
T cd08267 233 GGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPV--IDSVYPLEDAPEAYRRLKS 310 (319)
T ss_pred CCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeee--eeeEEcHHHHHHHHHHHhc
Confidence 9999998754321100 00 0111236788999999999998764 4789999999999999988
Q ss_pred CCCCceEEE
Q 020320 297 GRARGKVVI 305 (327)
Q Consensus 297 ~~~~gk~vv 305 (327)
+...+|+++
T Consensus 311 ~~~~~~vvv 319 (319)
T cd08267 311 GRARGKVVI 319 (319)
T ss_pred CCCCCcEeC
Confidence 877777763
No 112
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.2e-30 Score=233.89 Aligned_cols=292 Identities=31% Similarity=0.509 Sum_probs=238.4
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++.+..++....+.+.+.+.|.+.+++++||+.++++|++|+....+.++ ...+|.++|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 7899998877766788888877789999999999999999999988776542 234578899999999999999999999
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAG 159 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g 159 (327)
+||+|+++. .+|++++|+.++.++++++|+++++..++.++.++.++|+++ +...+.++++++|+|++|
T Consensus 81 ~Gd~V~~~~----------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~ 150 (325)
T TIGR02824 81 VGDRVCALV----------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGAS 150 (325)
T ss_pred CCCEEEEcc----------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcc
Confidence 999999874 258999999999999999999999999998999999999987 468899999999999999
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK 231 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~ 231 (327)
.+|++++++++.+ |++++++.+++++.+.++++|.+.+++.....+.... +++|++++++|.. ...+.+++
T Consensus 151 ~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~ 229 (325)
T TIGR02824 151 GIGTTAIQLAKAF-GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALA 229 (325)
T ss_pred hHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhc
Confidence 9999999999999 9999988888888888888998887766554443322 3699999999853 66788999
Q ss_pred CCCcEEEeeCCCCC--C--------cee-eEEee--c---------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHH
Q 020320 232 DNAPIVDITWPPSH--P--------RAI-YSSLT--V---------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIE 289 (327)
Q Consensus 232 ~~g~~v~~g~~~~~--~--------~~~-~~~~~--~---------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~ 289 (327)
++|+++.++..... . ... +.... . ..+.+.+++++++++.+.+. +++.|+++++++
T Consensus 230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~ 307 (325)
T TIGR02824 230 LDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAAQ 307 (325)
T ss_pred cCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHHH
Confidence 99999998753311 0 000 01111 1 12345667889999988753 578899999999
Q ss_pred HHHHHHhCCCCceEEEE
Q 020320 290 AFRYLETGRARGKVVIS 306 (327)
Q Consensus 290 a~~~~~~~~~~gk~vv~ 306 (327)
+++.+.++...+|++++
T Consensus 308 ~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 308 AHALMESGDHIGKIVLT 324 (325)
T ss_pred HHHHHHhCCCcceEEEe
Confidence 99999988888888875
No 113
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=6e-31 Score=237.92 Aligned_cols=292 Identities=25% Similarity=0.354 Sum_probs=223.6
Q ss_pred ccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEE
Q 020320 9 EYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEV 85 (327)
Q Consensus 9 ~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 85 (327)
+++. .+++++.|.|.++++||+||+.++++|++|+..+.+.. ....+|.++|+|++|+|+++|++++++++||+|
T Consensus 6 ~~~~--~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 6 KPGY--GAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cCCC--CcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 4444 49999999999999999999999999999998765432 122356789999999999999999999999999
Q ss_pred EEecc------------cccccCc-----CCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCC
Q 020320 86 YGNIQ------------DFNAEGK-----LKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKT 148 (327)
Q Consensus 86 ~~~~~------------~~~~~~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 148 (327)
++... ....|.. ....|+|++|++++.+.++++|++++.+.+ .++..+.++++++ .....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~-~~~~~~ 161 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV-LAGPIS 161 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH-HccCCC
Confidence 87421 1111111 124689999999999999999999998655 4667778888886 445678
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIG 221 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g 221 (327)
|++++|.| +|.+|.+++++++++ |.+ ++++.+++++.+.++++|++.+++.....+.+.+ +++|+++|++|
T Consensus 162 g~~vlI~~-~g~vg~~a~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g 239 (340)
T TIGR00692 162 GKSVLVTG-AGPIGLMAIAVAKAS-GAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSG 239 (340)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCC
Confidence 99999976 799999999999999 887 6666577778888899999888877665554322 46999999987
Q ss_pred C---chhhhhhhcCCCcEEEeeCCCC-CCce---------eeEE--e-ecCHHHHHHHHhHHHCCCceeeeCCCcccchh
Q 020320 222 D---CKNSFVVAKDNAPIVDITWPPS-HPRA---------IYSS--L-TVSGEILEKLRPFIESGKLKAQIDPTGPYKFK 285 (327)
Q Consensus 222 ~---~~~~~~~l~~~g~~v~~g~~~~-~~~~---------~~~~--~-~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 285 (327)
. ....+.+++++|+++.+|.... .+.. +... . ....+.+++++++++++++++.+.+.+.++++
T Consensus 240 ~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~ 319 (340)
T TIGR00692 240 APKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFD 319 (340)
T ss_pred CHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHH
Confidence 4 3667899999999999985421 1100 0000 0 11235578899999999997433357899999
Q ss_pred hHHHHHHHHHhCCCCceEEEEe
Q 020320 286 DVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 286 ~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
+++++++.+.++. .+|+++.+
T Consensus 320 ~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 320 KFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred HHHHHHHHHhcCC-CceEEEeC
Confidence 9999999998776 48998764
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=9.4e-31 Score=235.52 Aligned_cols=287 Identities=24% Similarity=0.318 Sum_probs=226.9
Q ss_pred CceeEEecccC----CCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCC---CCCCCCCcccccccEEEEEeC
Q 020320 1 MQNAWYYEEYG----PKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPL---FPSDFPAVPGCDMAGIVVAKG 73 (327)
Q Consensus 1 ~~~~~v~~~~~----~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG 73 (327)
+-|+|+++..+ .++.+++++.|.|++.+++|+||+.++++|++|.....+.. ++...+.++|+|++|+|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G 80 (329)
T cd05288 1 SNRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESR 80 (329)
T ss_pred CCcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecC
Confidence 35788887765 34679999999999999999999999999998876554421 111124578999999999999
Q ss_pred CCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeec-cceecCCCCCC--HHhhcc-cchHHHHHHHHHH-hcCCCC
Q 020320 74 TSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEE-SLIAKKPKNIS--FEEAAS-LPLAVQTAIEGFK-TAGFKT 148 (327)
Q Consensus 74 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~-~~~~~~ 148 (327)
++ ++++||+|+++ ++|++|+.++. +.++++|++++ +..++. +++++.++|+++. ...+.+
T Consensus 81 ~~--~~~~Gd~V~~~-------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~ 145 (329)
T cd05288 81 SP--DFKVGDLVSGF-------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKP 145 (329)
T ss_pred CC--CCCCCCEEecc-------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCC
Confidence 65 79999999975 47999999999 99999999985 445544 7888999999985 477899
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhhhc-----cCccEEEeCCCC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRKTKYEDIE-----EKFDVLYDTIGD 222 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~ 222 (327)
+++|+|+|++|.+|++++++++.+ |++++++++++++.+.+++ +|++++++.++.++.... +++|+++|++|.
T Consensus 146 ~~~vlI~g~~g~ig~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~ 224 (329)
T cd05288 146 GETVVVSAAAGAVGSVVGQIAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGG 224 (329)
T ss_pred CCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchH
Confidence 999999999999999999999998 9999888889999999988 999988887765443321 479999999985
Q ss_pred c--hhhhhhhcCCCcEEEeeCCCCCCc---------------eee-EEeec-C-----HHHHHHHHhHHHCCCceeeeCC
Q 020320 223 C--KNSFVVAKDNAPIVDITWPPSHPR---------------AIY-SSLTV-S-----GEILEKLRPFIESGKLKAQIDP 278 (327)
Q Consensus 223 ~--~~~~~~l~~~g~~v~~g~~~~~~~---------------~~~-~~~~~-~-----~~~~~~~~~l~~~g~~~~~~~~ 278 (327)
. ..++.+++++|+++.+|....... ... ..... . .+.+.++++++.++.+++. +
T Consensus 225 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~ 302 (329)
T cd05288 225 EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYR--E 302 (329)
T ss_pred HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccc--c
Confidence 3 678899999999999875332110 000 01111 1 2457888999999999864 3
Q ss_pred CcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 279 TGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 279 ~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
...+++++++++++.+.++...+|+++
T Consensus 303 ~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 303 DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred cccccHHHHHHHHHHHhcCCCccceeC
Confidence 466899999999999988887778763
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.4e-30 Score=231.15 Aligned_cols=297 Identities=29% Similarity=0.457 Sum_probs=238.6
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
||++++...+.++.+.+.+.+.|.+.+++++|++.++++|++|+....+.+. ...+|.++|||++|+|+.+|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 7899998877766788988888889999999999999999999987766542 234577899999999999999999999
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAG 159 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g 159 (327)
+||+|+++... .....|++++|+.++.+.++++|++++...++.++..+.++|+++. ...+.++++++|+|++|
T Consensus 81 ~Gd~V~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~ 155 (328)
T cd08268 81 VGDRVSVIPAA-----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASS 155 (328)
T ss_pred CCCEEEecccc-----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCcc
Confidence 99999987421 1123589999999999999999999999999999999999999985 57888999999999899
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhc
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAK 231 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~ 231 (327)
.+|++++++++.. |++++.++.++++.+.+.++|.+.+++.+...+.... +++|++++++|.. ..++.+++
T Consensus 156 ~~g~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~ 234 (328)
T cd08268 156 SVGLAAIQIANAA-GATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALA 234 (328)
T ss_pred HHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhc
Confidence 9999999999999 9999999888888888888998888876655443321 3699999998853 66789999
Q ss_pred CCCcEEEeeCCCCCC----c------e-eeEEeec-----C----HHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHH
Q 020320 232 DNAPIVDITWPPSHP----R------A-IYSSLTV-----S----GEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAF 291 (327)
Q Consensus 232 ~~g~~v~~g~~~~~~----~------~-~~~~~~~-----~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~ 291 (327)
++|+++.+|...... . . .+..... . ...++.+.+++.++.+.+. .+..|+++++++++
T Consensus 235 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 312 (328)
T cd08268 235 PGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAH 312 (328)
T ss_pred cCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHH
Confidence 999999887432110 0 0 1111111 1 2335556667778887753 46889999999999
Q ss_pred HHHHhCCCCceEEEE
Q 020320 292 RYLETGRARGKVVIS 306 (327)
Q Consensus 292 ~~~~~~~~~gk~vv~ 306 (327)
+.+.++...+|++++
T Consensus 313 ~~~~~~~~~~~vv~~ 327 (328)
T cd08268 313 RYLESGQQIGKIVVT 327 (328)
T ss_pred HHHHcCCCCceEEEe
Confidence 999888888898875
No 116
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=1.3e-30 Score=231.36 Aligned_cols=272 Identities=29% Similarity=0.502 Sum_probs=225.3
Q ss_pred CCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCC
Q 020320 23 LPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQL 101 (327)
Q Consensus 23 ~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 101 (327)
.|.+.+++|+||+.++++|++|+....+.++ ...+|.++|+|++|+|+++|++++++++||+|+++.. ...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------~~~ 73 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG--------ESM 73 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC--------CCC
Confidence 4678899999999999999999998877653 2356889999999999999999999999999998742 135
Q ss_pred CceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe
Q 020320 102 GALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT 181 (327)
Q Consensus 102 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~ 181 (327)
|+|++|+.++.+.++++|+++++++++.++..+.++|++++...+++|++++|++++|.+|++++++++++ |++++.++
T Consensus 74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~-g~~v~~~~ 152 (303)
T cd08251 74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATA 152 (303)
T ss_pred cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEc
Confidence 89999999999999999999999999999999999999998889999999999999999999999999999 99998888
Q ss_pred CCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCCC-------
Q 020320 182 TSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSHP------- 246 (327)
Q Consensus 182 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~~------- 246 (327)
.++++.+.++++|++.+++....++...+ +++|+++|+++.. ...+.+++++|+++.++......
T Consensus 153 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 232 (303)
T cd08251 153 SSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS 232 (303)
T ss_pred CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh
Confidence 88889999999999998887665544322 4699999999743 66789999999999886532110
Q ss_pred ----ceeeEEeec----------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 247 ----RAIYSSLTV----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 247 ----~~~~~~~~~----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
...+....+ ..+.+.++++++.++.+++. .++.|++++++++++.+.++...+|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 233 VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 001111111 12457778899999998753 4788999999999999998888888763
No 117
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.7e-29 Score=227.69 Aligned_cols=292 Identities=32% Similarity=0.449 Sum_probs=231.9
Q ss_pred eeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 3 NAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 3 ~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
|++++..++..+.+.+.+.+.|.+.+++|+||+.++++|++|+....+.++ ....|.++|||++|+|+.+|++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 567777777666688888888889999999999999999999998877543 2345778999999999999999999999
Q ss_pred CCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCch
Q 020320 82 GDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGG 160 (327)
Q Consensus 82 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~ 160 (327)
||+|+++. ..|+|++|+.++.+.++++|+++++.+++.++..+.++|+++. ...++++++|+|+|++|.
T Consensus 81 G~~V~~~~----------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~ 150 (337)
T cd08275 81 GDRVMGLT----------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGG 150 (337)
T ss_pred CCEEEEec----------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcch
Confidence 99999975 2589999999999999999999999999988999999999984 688999999999998899
Q ss_pred HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc-----cCccEEEeCCCCc--hhhhhhhcCC
Q 020320 161 VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE-----EKFDVLYDTIGDC--KNSFVVAKDN 233 (327)
Q Consensus 161 ~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~d~v~d~~g~~--~~~~~~l~~~ 233 (327)
+|++++++++.+ ....++....+++.+.++++|++.+++.+..++...+ +++|+++|++|+. ...+.+++++
T Consensus 151 ~g~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~ 229 (337)
T cd08275 151 VGLAAGQLCKTV-PNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPM 229 (337)
T ss_pred HHHHHHHHHHHc-cCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccC
Confidence 999999999987 3322222234457788888999888877665543322 4699999999843 6678999999
Q ss_pred CcEEEeeCCCCCC--------------------------ce-eeEEeec---------CHHHHHHHHhHHHCCCceeeeC
Q 020320 234 APIVDITWPPSHP--------------------------RA-IYSSLTV---------SGEILEKLRPFIESGKLKAQID 277 (327)
Q Consensus 234 g~~v~~g~~~~~~--------------------------~~-~~~~~~~---------~~~~~~~~~~l~~~g~~~~~~~ 277 (327)
|+++.+|...... .. .+..... ....+.++++++.++.+.+.
T Consensus 230 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 307 (337)
T cd08275 230 GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK-- 307 (337)
T ss_pred cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--
Confidence 9999987543110 00 0001111 01346788889999988754
Q ss_pred CCcccchhhHHHHHHHHHhCCCCceEEEEe
Q 020320 278 PTGPYKFKDVIEAFRYLETGRARGKVVISA 307 (327)
Q Consensus 278 ~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~ 307 (327)
.++.|++++++++++.+.++...+|+++.+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 308 IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 468899999999999999888888998764
No 118
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.98 E-value=9.8e-30 Score=226.60 Aligned_cols=237 Identities=26% Similarity=0.422 Sum_probs=193.3
Q ss_pred ceeEEecccCCCcceEEeeccCCCCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNT 81 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 81 (327)
||+++.++++ ...+.+++++.|.+.+++|+||+.++++|++|+....+.+.....|.++|+|++|+|+.+|++++.+++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 79 (306)
T cd08258 1 MKALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKV 79 (306)
T ss_pred CeeEEEecCC-CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCC
Confidence 7899987644 245999999999999999999999999999999888776533345788999999999999999999999
Q ss_pred CCEEEEecc--c-----------ccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-
Q 020320 82 GDEVYGNIQ--D-----------FNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK- 142 (327)
Q Consensus 82 Gd~V~~~~~--~-----------~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~- 142 (327)
||+|++... . .+.|. +....|+|++|++++.+.++++|+++++++++ ++..+.++|+++.
T Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~ 158 (306)
T cd08258 80 GDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAE 158 (306)
T ss_pred CCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHH
Confidence 999998642 0 01111 01235899999999999999999999999887 6677788999984
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe--CCcccHHHHHHcCCCEEEeCCCCChhhhc------cCcc
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT--TSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFD 214 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d 214 (327)
..+++++++|+|.| +|.+|++++++|+.+ |.+++.+. .++++.++++++|++++ +....++.+.+ +++|
T Consensus 159 ~~~~~~g~~vlI~g-~g~~g~~~~~la~~~-G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd 235 (306)
T cd08258 159 RSGIRPGDTVVVFG-PGPIGLLAAQVAKLQ-GATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGAD 235 (306)
T ss_pred hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCC
Confidence 58889999999976 899999999999999 88877663 24447788889999887 76665554432 4699
Q ss_pred EEEeCCCC---chhhhhhhcCCCcEEEeeCCC
Q 020320 215 VLYDTIGD---CKNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 215 ~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~ 243 (327)
+++|++|. ....+.+++++|+++.+|...
T Consensus 236 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 267 (306)
T cd08258 236 VVIECSGAVPALEQALELLRKGGRIVQVGIFG 267 (306)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccC
Confidence 99999974 267789999999999998754
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.98 E-value=3.4e-29 Score=224.05 Aligned_cols=291 Identities=32% Similarity=0.489 Sum_probs=236.2
Q ss_pred ceeEEecccCCCcceEEeeccCCCCC-CCeEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTPQ-HDQLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKF 79 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~~-~~eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 79 (327)
|+++++..++....+.+.+.+ |.+. +++++|++.++++|++|+....+.+. ...+|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 789999877766668888877 7665 59999999999999999988766542 22346789999999999999999999
Q ss_pred CCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCC
Q 020320 80 NTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGA 158 (327)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~ 158 (327)
++||+|+++. ..|++++|+.++.+.++++|++++..+++.++..+.+|++++. ...+.++++++|+|++
T Consensus 80 ~~G~~V~~~~----------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~ 149 (323)
T cd08241 80 KVGDRVVALT----------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAA 149 (323)
T ss_pred CCCCEEEEec----------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 9999999974 2589999999999999999999999998888889999999985 6888999999999988
Q ss_pred chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCC--chhhhhhh
Q 020320 159 GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGD--CKNSFVVA 230 (327)
Q Consensus 159 g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~--~~~~~~~l 230 (327)
|.+|++++++++.. |++++.++.++++.+.++++|++.+++....++...+ .++|.+++++|. ...++.++
T Consensus 150 ~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~ 228 (323)
T cd08241 150 GGVGLAAVQLAKAL-GARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSL 228 (323)
T ss_pred chHHHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhh
Confidence 99999999999998 9999998888888999988998888876665544322 369999999984 36778999
Q ss_pred cCCCcEEEeeCCCCCC----c------ee-eEEeec----------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHH
Q 020320 231 KDNAPIVDITWPPSHP----R------AI-YSSLTV----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIE 289 (327)
Q Consensus 231 ~~~g~~v~~g~~~~~~----~------~~-~~~~~~----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~ 289 (327)
+++|+++.++...... . .. +..... ..+.++++++++.++.+.+. .++.|+++++++
T Consensus 229 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 306 (323)
T cd08241 229 AWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPH--VSAVFPLEQAAE 306 (323)
T ss_pred ccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccc--cceEEcHHHHHH
Confidence 9999999887532110 0 00 011110 13567889999999988653 578899999999
Q ss_pred HHHHHHhCCCCceEEEE
Q 020320 290 AFRYLETGRARGKVVIS 306 (327)
Q Consensus 290 a~~~~~~~~~~gk~vv~ 306 (327)
+|+.+.++...+|++++
T Consensus 307 ~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 307 ALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHhCCCCCcEEeC
Confidence 99999888777888763
No 120
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.97 E-value=7.4e-30 Score=224.49 Aligned_cols=226 Identities=21% Similarity=0.218 Sum_probs=175.7
Q ss_pred cccccccEEEEEeCCCCC------CCCCCCEEEEec----c--------cccccCcC------------CCCCceeeEEE
Q 020320 60 VPGCDMAGIVVAKGTSVT------KFNTGDEVYGNI----Q--------DFNAEGKL------------KQLGALAEFIV 109 (327)
Q Consensus 60 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~----~--------~~~~~~~~------------~~~g~~~~~~~ 109 (327)
++|||++|+|+++|++|+ ++++||||.... + ..+.|... ..+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 479999999999999999 899999997532 1 12333211 13699999999
Q ss_pred eecc-ceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccH
Q 020320 110 VEES-LIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKV 187 (327)
Q Consensus 110 v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~ 187 (327)
+++. +++++|++++++.++.+++++.|+|++++.....++++|+|+| +|++|++++++||++ |++ ++++..+++|+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~-G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVG-AGMLGLTAAAAAAAA-GAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHH
Confidence 9987 7999999999999998888889999999877777999999998 699999999999999 887 66666788899
Q ss_pred HHHHHcCCCEEEeCCCCCh--hhh--ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCCC-CCc------------
Q 020320 188 EFVKELGADKVIDYRKTKY--EDI--EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPPS-HPR------------ 247 (327)
Q Consensus 188 ~~~~~~g~~~v~~~~~~~~--~~~--~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~~-~~~------------ 247 (327)
++++++|++.+++...... ... .+++|++||++|.. ..++.+++++|+++.+|.... .+.
T Consensus 159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~ 238 (280)
T TIGR03366 159 ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWL 238 (280)
T ss_pred HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCc
Confidence 9999999999887543211 111 14799999999843 678999999999999985421 111
Q ss_pred eeeEEeecCHHHHHHHHhHHHCC--CceeeeCCCcccchhhH
Q 020320 248 AIYSSLTVSGEILEKLRPFIESG--KLKAQIDPTGPYKFKDV 287 (327)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~i 287 (327)
.+..+.....++++++++++.++ ++++.+++++.|+++|+
T Consensus 239 ~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 239 TIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred EEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 11122223457789999999984 56655677899998763
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=2.4e-28 Score=215.18 Aligned_cols=261 Identities=33% Similarity=0.472 Sum_probs=214.5
Q ss_pred CeEEEEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEE
Q 020320 29 DQLLVQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFI 108 (327)
Q Consensus 29 ~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~ 108 (327)
++|+||+.++++|++|++...+.. ..+|.++|||++|+|+++|++++++++||+|+++. .|+|++|+
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-----------~g~~~~~~ 67 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-----------PGAFATHV 67 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-----------cCcccceE
Confidence 589999999999999999887754 24578899999999999999999999999999874 48999999
Q ss_pred EeeccceecCCCCCCHHhhcccchHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320 109 VVEESLIAKKPKNISFEEAASLPLAVQTAIEGFK-TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187 (327)
Q Consensus 109 ~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~ 187 (327)
.++.+.++++|+++++.+++.++.++.++|+++. ...+++|++++|+|++|.+|++++++++.+ |++++.++.++++.
T Consensus 68 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~ 146 (293)
T cd05195 68 RVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATVGSEEKR 146 (293)
T ss_pred EechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHH
Confidence 9999999999999999999999999999999984 588999999999998999999999999999 99998888888889
Q ss_pred HHHHHcC--CCEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCCC---c-------
Q 020320 188 EFVKELG--ADKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSHP---R------- 247 (327)
Q Consensus 188 ~~~~~~g--~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~~---~------- 247 (327)
+.+++++ ++.+++....++.... +++|++++++|.. ...+.+++++|+++.++...... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 226 (293)
T cd05195 147 EFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFLR 226 (293)
T ss_pred HHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhcc
Confidence 8888888 6778876554443321 3699999999854 77889999999999887543210 0
Q ss_pred -eeeEEeec----------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 248 -AIYSSLTV----------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 248 -~~~~~~~~----------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
..+....+ ..+.+..++++++++++.+. .++.+++++++++++.+.++...+|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 227 NVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPL--PPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred CCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccC--CCeeechhhHHHHHHHHhcCCCCceecC
Confidence 01111111 12456788899999998753 4678999999999999998887777763
No 122
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=1.6e-27 Score=209.65 Aligned_cols=256 Identities=32% Similarity=0.490 Sum_probs=209.6
Q ss_pred EEEEEEeeChHhHhhhcCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeec
Q 020320 33 VQVRAAALNPIDSKRRQRPLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEE 112 (327)
Q Consensus 33 V~v~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~ 112 (327)
||+.++++|++|++...+.++ .|.++|||++|+|+.+|++++.+++||+|+++. .|+|++|+.++.
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------~g~~~~~~~~~~ 67 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------PGSFATYVRTDA 67 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------CCceeeEEEccH
Confidence 899999999999998877543 367899999999999999999999999999874 489999999999
Q ss_pred cceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH
Q 020320 113 SLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK 191 (327)
Q Consensus 113 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~ 191 (327)
++++++|+++++.+++.+++.+.++|+++ ....+.++++++|+|++|.+|++++++++++ |++++.+++++++.+.++
T Consensus 68 ~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~ 146 (288)
T smart00829 68 RLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATAGSPEKRDFLR 146 (288)
T ss_pred HHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999998 5688999999999999999999999999998 999888888999999999
Q ss_pred HcCC--CEEEeCCCCChhhhc------cCccEEEeCCCCc--hhhhhhhcCCCcEEEeeCCCCC---Cc--------eee
Q 020320 192 ELGA--DKVIDYRKTKYEDIE------EKFDVLYDTIGDC--KNSFVVAKDNAPIVDITWPPSH---PR--------AIY 250 (327)
Q Consensus 192 ~~g~--~~v~~~~~~~~~~~~------~~~d~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~~~---~~--------~~~ 250 (327)
++|+ +++++.+..++.+.. +++|+++|++|+. ...+.+++++|+++.+|..... .. ..+
T Consensus 147 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~ 226 (288)
T smart00829 147 ELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVSY 226 (288)
T ss_pred HcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCceE
Confidence 9998 778876655543322 3699999998743 6678999999999988753210 00 011
Q ss_pred EEeec---------CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 251 SSLTV---------SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 251 ~~~~~---------~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
....+ ..+.+..++++++++++.+. ..+.|++++++++++.+..+...+|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 227 HAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred EEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 11111 12346778889999988753 4678999999999999988877677663
No 123
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.95 E-value=2.1e-26 Score=201.11 Aligned_cols=212 Identities=33% Similarity=0.453 Sum_probs=178.3
Q ss_pred eEEEEEEEEeeChHhHhhhcCCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccc-------------ccc
Q 020320 30 QLLVQVRAAALNPIDSKRRQRPLF-PSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDF-------------NAE 95 (327)
Q Consensus 30 eVlV~v~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~-------------~~~ 95 (327)
||+|++.++++|++|+..+.+..+ ...+|.++|||++|+|+++|++++.+++||+|++..... ...
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 689999999999999998877654 345678899999999999999999999999999875210 000
Q ss_pred CcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHhhcC
Q 020320 96 GKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG 174 (327)
Q Consensus 96 ~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g 174 (327)
.+....|+|++|+.++.+.++++|+++++++++.++..+.+||+++.. ..+.++++++|+|+++ +|++++++++.+ |
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~-g 158 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA-G 158 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc-C
Confidence 122346899999999999999999999999999999999999999965 4458999999999666 999999999998 8
Q ss_pred CcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh-----ccCccEEEeCCCC-c--hhhhhhhcCCCcEEEeeCCC
Q 020320 175 ASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI-----EEKFDVLYDTIGD-C--KNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 175 ~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-----~~~~d~v~d~~g~-~--~~~~~~l~~~g~~v~~g~~~ 243 (327)
.++++++.++++.+.++++|++++++......... ..++|+++++++. . ...+.+++++|+++.++...
T Consensus 159 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 159 ARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred CeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 99998889988999999999988887766555443 2579999999986 2 67789999999999998654
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.94 E-value=2.8e-25 Score=195.15 Aligned_cols=229 Identities=32% Similarity=0.418 Sum_probs=183.6
Q ss_pred CCCCcccccccEEEEEeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHH
Q 020320 56 DFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQ 135 (327)
Q Consensus 56 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 135 (327)
.+|.++|||++|+|+++|++++++++||+|+++ +.|++|++++.++++++|+++++.+++.+ .++.
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ 84 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAA 84 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHH
Confidence 388999999999999999999999999999986 35899999999999999999999998888 7889
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHHcC-CCEEEeCCCCChhhhccCc
Q 020320 136 TAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKELG-ADKVIDYRKTKYEDIEEKF 213 (327)
Q Consensus 136 ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~ 213 (327)
+||+++...+++++++++|+| +|.+|++++++|+++ |.+ ++++++++++.+.++++| ++.++...... ...+++
T Consensus 85 ta~~~~~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~-g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~ 160 (277)
T cd08255 85 TALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAA-GAREVVGVDPDAARRELAEALGPADPVAADTADE--IGGRGA 160 (277)
T ss_pred HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEECCCHHHHHHHHHcCCCccccccchhh--hcCCCC
Confidence 999999888999999999997 799999999999999 888 888888889999999999 56665433211 122479
Q ss_pred cEEEeCCCC---chhhhhhhcCCCcEEEeeCCCCCC----------c-eeeEE-ee-----------cCHHHHHHHHhHH
Q 020320 214 DVLYDTIGD---CKNSFVVAKDNAPIVDITWPPSHP----------R-AIYSS-LT-----------VSGEILEKLRPFI 267 (327)
Q Consensus 214 d~v~d~~g~---~~~~~~~l~~~g~~v~~g~~~~~~----------~-~~~~~-~~-----------~~~~~~~~~~~l~ 267 (327)
|++||+++. ....+.+++++|+++.+|...... . .+... .. ...+.++++++++
T Consensus 161 d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (277)
T cd08255 161 DVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL 240 (277)
T ss_pred CEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence 999999874 267889999999999987543210 0 11111 00 0125688999999
Q ss_pred HCCCceeeeCCCcccchhhHHHHHHHHHhC-CCCceEE
Q 020320 268 ESGKLKAQIDPTGPYKFKDVIEAFRYLETG-RARGKVV 304 (327)
Q Consensus 268 ~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~-~~~gk~v 304 (327)
+++.+.+. +.+.|++++++++|+.+.++ ....|++
T Consensus 241 ~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~k~~ 276 (277)
T cd08255 241 AEGRLEAL--ITHRVPFEDAPEAYRLLFEDPPECLKVV 276 (277)
T ss_pred HcCCcccc--ccCccCHHHHHHHHHHHHcCCccceeee
Confidence 99998753 47889999999999999766 3334554
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=7.1e-24 Score=177.59 Aligned_cols=289 Identities=22% Similarity=0.306 Sum_probs=215.6
Q ss_pred eeEEeccc--CCC--cceEEee--cc-CCCCCCCeEEEEEEEEeeChHhHhhhcCCCCC-CCCCCcccc----cccEEEE
Q 020320 3 NAWYYEEY--GPK--EVLKLGD--FP-LPTPQHDQLLVQVRAAALNPIDSKRRQRPLFP-SDFPAVPGC----DMAGIVV 70 (327)
Q Consensus 3 ~~~v~~~~--~~~--~~l~~~~--~~-~p~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~-~~~p~~~G~----e~~G~V~ 70 (327)
|+|++..+ |-+ ..+.+.+ +. ..+++.++||||.+|.+.+|..+-.+....+. .-.|..+|. .++|+|+
T Consensus 5 kqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi 84 (343)
T KOG1196|consen 5 KQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVI 84 (343)
T ss_pred cEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEE
Confidence 55666542 222 2344443 33 44679999999999999999988776554332 223444443 5688888
Q ss_pred EeCCCCCCCCCCCEEEEecccccccCcCCCCCceeeEEEeecc--ceecCCC--CCCHHhhc-ccchHHHHHHHHH-Hhc
Q 020320 71 AKGTSVTKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEES--LIAKKPK--NISFEEAA-SLPLAVQTAIEGF-KTA 144 (327)
Q Consensus 71 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~--~~~~~~aa-~~~~~~~ta~~~l-~~~ 144 (327)
+. +-+++++||.|.++. +|.+|.+++.. ..++++. +.++--.. .+.++.+|||-++ +..
T Consensus 85 ~S--~~~~~~~GD~v~g~~-------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~ 149 (343)
T KOG1196|consen 85 DS--GHPNYKKGDLVWGIV-------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEIC 149 (343)
T ss_pred ec--CCCCCCcCceEEEec-------------cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhc
Confidence 85 557899999999875 69999988653 4444443 44443333 3477788999998 468
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCCCC-Chhhhc-----cCccEEE
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYRKT-KYEDIE-----EKFDVLY 217 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~-----~~~d~v~ 217 (327)
.++.|++|+|.||+|++|+.+.|+||.+ |+++|..+.++++..+++ ++|.|..+|++++ +....+ .++|+.|
T Consensus 150 ~pk~geTv~VSaAsGAvGql~GQ~Ak~~-Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYf 228 (343)
T KOG1196|consen 150 SPKKGETVFVSAASGAVGQLVGQFAKLM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYF 228 (343)
T ss_pred CCCCCCEEEEeeccchhHHHHHHHHHhc-CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEE
Confidence 8999999999999999999999999999 999999999999999986 5799999999887 554443 5899999
Q ss_pred eCCCCc--hhhhhhhcCCCcEEEeeCCC----CCCc-------eeeEEeec-----------CHHHHHHHHhHHHCCCce
Q 020320 218 DTIGDC--KNSFVVAKDNAPIVDITWPP----SHPR-------AIYSSLTV-----------SGEILEKLRPFIESGKLK 273 (327)
Q Consensus 218 d~~g~~--~~~~~~l~~~g~~v~~g~~~----~~~~-------~~~~~~~~-----------~~~~~~~~~~l~~~g~~~ 273 (327)
|.+|+. +..+..|+..|+++..|.-. ..+. .+.....+ ..+.+..+..++++|+|.
T Consensus 229 eNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~ 308 (343)
T KOG1196|consen 229 ENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKIT 308 (343)
T ss_pred eccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceE
Confidence 999864 77889999999999987422 1111 11121111 246678899999999999
Q ss_pred eeeCCCcccchhhHHHHHHHHHhCCCCceEEEEeCC
Q 020320 274 AQIDPTGPYKFKDVIEAFRYLETGRARGKVVISAFP 309 (327)
Q Consensus 274 ~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv~~~~ 309 (327)
.... -.-++++.++||.-|..+++.||.++++..
T Consensus 309 y~ed--i~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 309 YVED--IADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred Eehh--HHHHHhccHHHHHHHhccCcccceEEEeec
Confidence 8652 334799999999999999999999998753
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.94 E-value=8.5e-26 Score=215.62 Aligned_cols=279 Identities=23% Similarity=0.352 Sum_probs=229.6
Q ss_pred CCCcceEEeeccCC---CCCCCeEEEEEEEEeeChHhHhhhcCCCCCCCCC-------CcccccccEEEEEeCCCCCCCC
Q 020320 11 GPKEVLKLGDFPLP---TPQHDQLLVQVRAAALNPIDSKRRQRPLFPSDFP-------AVPGCDMAGIVVAKGTSVTKFN 80 (327)
Q Consensus 11 ~~~~~l~~~~~~~p---~~~~~eVlV~v~~~~i~~~d~~~~~~~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~ 80 (327)
|+..+++|.+.|.. +..++.=+.-|-|++||..|+....|..++...| +++|-|++|+ .+
T Consensus 1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DA 1493 (2376)
T ss_pred ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cC
Confidence 55567888888765 4577778889999999999999998988554444 7889999887 67
Q ss_pred CCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHH-HhcCCCCCCEEEEEcCCc
Q 020320 81 TGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGF-KTAGFKTGQTIFIVGGAG 159 (327)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~~~~vlI~ga~g 159 (327)
-|.||+++.+ .-++++.+.++.+++|.+|++..+++|++.|+.|.|+|+++ .++..++|+++||++++|
T Consensus 1494 ~GrRvM~mvp----------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsG 1563 (2376)
T KOG1202|consen 1494 SGRRVMGMVP----------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSG 1563 (2376)
T ss_pred CCcEEEEeee----------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCC
Confidence 8999999874 45788899999999999999999999999999999999998 589999999999999999
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhc------cCccEEEeCCC--Cchhhh
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIE------EKFDVLYDTIG--DCKNSF 227 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g--~~~~~~ 227 (327)
++|++|+.+|.++ |++++.++.+.++++++.+ +...++-|+++.+|.+-. +|+|+|+++.. .+...+
T Consensus 1564 GVGQAAIaiALa~-G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASi 1642 (2376)
T KOG1202|consen 1564 GVGQAAIAIALAH-GCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASI 1642 (2376)
T ss_pred chhHHHHHHHHHc-CCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHH
Confidence 9999999999999 9999999999999998864 446677788888888754 68999999986 458889
Q ss_pred hhhcCCCcEEEeeCCCCCCce---e--------eEEe------ecCHHHHHHHHhHHHCC----CceeeeCCCcccchhh
Q 020320 228 VVAKDNAPIVDITWPPSHPRA---I--------YSSL------TVSGEILEKLRPFIESG----KLKAQIDPTGPYKFKD 286 (327)
Q Consensus 228 ~~l~~~g~~v~~g~~~~~~~~---~--------~~~~------~~~~~~~~~~~~l~~~g----~~~~~~~~~~~~~~~~ 286 (327)
+||+..||+..+|........ + +... .-..+.++++.+++++| ..+| +++++|+-.+
T Consensus 1643 RCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~P--L~ttvF~~~q 1720 (2376)
T KOG1202|consen 1643 RCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRP--LPTTVFHGQQ 1720 (2376)
T ss_pred HHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceec--cccccccHHH
Confidence 999999999999864422111 1 1111 11235677777777665 4554 5689999999
Q ss_pred HHHHHHHHHhCCCCceEEEEeCCCCC
Q 020320 287 VIEAFRYLETGRARGKVVISAFPYTE 312 (327)
Q Consensus 287 i~~a~~~~~~~~~~gk~vv~~~~~~~ 312 (327)
+++||++|.+++..||+|+++.+...
T Consensus 1721 vE~AFRfMasGKHIGKVvikvr~eE~ 1746 (2376)
T KOG1202|consen 1721 VEDAFRFMASGKHIGKVVIKVRAEEP 1746 (2376)
T ss_pred HHHHHHHHhccCccceEEEEEccccc
Confidence 99999999999999999999976653
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.75 E-value=8.6e-18 Score=126.21 Aligned_cols=91 Identities=34% Similarity=0.440 Sum_probs=74.2
Q ss_pred CCeEEEEEEEEeeChHhHhhhcC-CCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEecc------------cccc
Q 020320 28 HDQLLVQVRAAALNPIDSKRRQR-PLFPSDFPAVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQ------------DFNA 94 (327)
Q Consensus 28 ~~eVlV~v~~~~i~~~d~~~~~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~------------~~~~ 94 (327)
|+|||||+.+++||++|++.+.+ ......+|.++|||++|+|+++|+++++|++||+|+.... ..+.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 68999999999999999999998 3456788999999999999999999999999999987432 1222
Q ss_pred c-----CcCCCCCceeeEEEeeccceecC
Q 020320 95 E-----GKLKQLGALAEFIVVEESLIAKK 118 (327)
Q Consensus 95 ~-----~~~~~~g~~~~~~~v~~~~~~~~ 118 (327)
| .+...+|+|+||+.+++++++++
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 3 23457899999999999999874
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.33 E-value=1.1e-11 Score=95.90 Aligned_cols=83 Identities=35% Similarity=0.527 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhc------cCccEEEeCCCCc---hhhhhhh
Q 020320 160 GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIE------EKFDVLYDTIGDC---KNSFVVA 230 (327)
Q Consensus 160 ~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~------~~~d~v~d~~g~~---~~~~~~l 230 (327)
++|++++|+||++ |+++++++++++|+++++++|+++++++++.++.+.+ +++|++|||+|.. +.++.++
T Consensus 1 ~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAM-GAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHc-CCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 5899999999999 7999999999999999999999999999888776654 3699999999943 7889999
Q ss_pred cCCCcEEEeeCCC
Q 020320 231 KDNAPIVDITWPP 243 (327)
Q Consensus 231 ~~~g~~v~~g~~~ 243 (327)
+++|+++.+|...
T Consensus 80 ~~~G~~v~vg~~~ 92 (130)
T PF00107_consen 80 RPGGRIVVVGVYG 92 (130)
T ss_dssp EEEEEEEEESSTS
T ss_pred ccCCEEEEEEccC
Confidence 9999999999876
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.22 E-value=1.5e-10 Score=105.46 Aligned_cols=168 Identities=18% Similarity=0.183 Sum_probs=123.7
Q ss_pred HHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320 137 AIEGFKT--AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD 214 (327)
Q Consensus 137 a~~~l~~--~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d 214 (327)
.|.++.+ ....+|++|+|.| +|.+|+.+++.++.+ |++++++..++.|...++++|++.+. ..+...++|
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~-Ga~ViV~d~d~~R~~~A~~~G~~~~~------~~e~v~~aD 259 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQ-GARVIVTEVDPICALQAAMEGYEVMT------MEEAVKEGD 259 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECChhhHHHHHhcCCEEcc------HHHHHcCCC
Confidence 4555532 3347899999999 999999999999998 89988888899999999999985431 224456899
Q ss_pred EEEeCCCCc---hh-hhhhhcCCCcEEEeeCCCC-CCc--------eeeEEeecCHH-HHH--HHHhHHHCCCc-eeeeC
Q 020320 215 VLYDTIGDC---KN-SFVVAKDNAPIVDITWPPS-HPR--------AIYSSLTVSGE-ILE--KLRPFIESGKL-KAQID 277 (327)
Q Consensus 215 ~v~d~~g~~---~~-~~~~l~~~g~~v~~g~~~~-~~~--------~~~~~~~~~~~-~~~--~~~~l~~~g~~-~~~~~ 277 (327)
++|+++|.. .. .+..++++|.++.+|.... .+. ..........+ .++ +.+.++++|++ +....
T Consensus 260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~ 339 (413)
T cd00401 260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCA 339 (413)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCccc
Confidence 999999854 33 4889999999999986431 110 11111122112 455 69999999999 76667
Q ss_pred CCcc-----cchh-hHHHHHHHHHhCCC-CceEEEEeCCCCC
Q 020320 278 PTGP-----YKFK-DVIEAFRYLETGRA-RGKVVISAFPYTE 312 (327)
Q Consensus 278 ~~~~-----~~~~-~i~~a~~~~~~~~~-~gk~vv~~~~~~~ 312 (327)
.+|. ++|+ |+.++++.+.+... ..|+++.+.+.++
T Consensus 340 ~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~~d~ 381 (413)
T cd00401 340 TGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKKLDE 381 (413)
T ss_pred CCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHHHHH
Confidence 7888 9999 99999999987654 3688887765553
No 130
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.15 E-value=3e-11 Score=93.16 Aligned_cols=109 Identities=39% Similarity=0.543 Sum_probs=74.9
Q ss_pred cCCCEEEeCCCCChhhhccCccEEEeCCC--Cc---hhhhhhhcCCCcEEEeeCC-C-C----CCceeeEEeec------
Q 020320 193 LGADKVIDYRKTKYEDIEEKFDVLYDTIG--DC---KNSFVVAKDNAPIVDITWP-P-S----HPRAIYSSLTV------ 255 (327)
Q Consensus 193 ~g~~~v~~~~~~~~~~~~~~~d~v~d~~g--~~---~~~~~~l~~~g~~v~~g~~-~-~----~~~~~~~~~~~------ 255 (327)
||+++++|++..++ ....++|+|||++| .. ...+++| ++|+++.++.. . . ...........
T Consensus 1 LGAd~vidy~~~~~-~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPNA 78 (127)
T ss_dssp CT-SEEEETTCSHH-HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--HH
T ss_pred CCcCEEecCCCccc-cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCCc
Confidence 68999999997777 33578999999999 32 4556777 99999998741 0 0 00112222211
Q ss_pred -CHHHHHHHHhHHHCCCceeeeCCCcccchhhHHHHHHHHHhCCCCceEEE
Q 020320 256 -SGEILEKLRPFIESGKLKAQIDPTGPYKFKDVIEAFRYLETGRARGKVVI 305 (327)
Q Consensus 256 -~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~gk~vv 305 (327)
..+.++++.+++.+|++++++ .++||++++++|++.+.+++..||+|+
T Consensus 79 ~~~~~l~~l~~l~~~G~l~~~i--~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 79 IRAEALEELAELVAEGKLKPPI--DRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHHHHHHHHHHHHHTTSS---E--EEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred hHHHHHHHHHHHHHCCCeEEee--ccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 345699999999999999875 578999999999999999999999986
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.98 E-value=7e-09 Score=96.99 Aligned_cols=132 Identities=15% Similarity=0.184 Sum_probs=96.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCC-------------Chh----
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKT-------------KYE---- 207 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~-------------~~~---- 207 (327)
..++++|+|+| +|++|+++++.|+.+ |+++++.+.++++++.++++|++++ ++..+. ++.
T Consensus 162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~l-GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIG-AGVAGLAAIGAAGSL-GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 46899999999 899999999999999 8888889999999999999999865 544321 111
Q ss_pred ----hhccCccEEEeCCCC---------chhhhhhhcCCCcEEEeeCCCCCC-------ceee--------EEeecCHHH
Q 020320 208 ----DIEEKFDVLYDTIGD---------CKNSFVVAKDNAPIVDITWPPSHP-------RAIY--------SSLTVSGEI 259 (327)
Q Consensus 208 ----~~~~~~d~v~d~~g~---------~~~~~~~l~~~g~~v~~g~~~~~~-------~~~~--------~~~~~~~~~ 259 (327)
+..+++|++|+|+|. ...++..++++|.++.++...... ..+. ....+..+.
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~ 319 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRL 319 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhH
Confidence 112479999999983 267889999999999998642110 1111 111222344
Q ss_pred HHHHHhHHHCCCceeeeCCC
Q 020320 260 LEKLRPFIESGKLKAQIDPT 279 (327)
Q Consensus 260 ~~~~~~l~~~g~~~~~~~~~ 279 (327)
..++.+++.++.++...+.+
T Consensus 320 p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 320 PTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHHHHhCCccHHHHhc
Confidence 45699999999987654444
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.21 E-value=1.9e-05 Score=74.10 Aligned_cols=93 Identities=23% Similarity=0.338 Sum_probs=73.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCC-------------C-------
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKT-------------K------- 205 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~-------------~------- 205 (327)
.++++++|+| +|.+|+++++.++.+ |+.+++.+.++++++.++++|++.+. +..++ +
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~l-GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 4679999999 899999999999999 99988889999999999999987642 32110 1
Q ss_pred -hhhhccCccEEEeCC---CC--c----hhhhhhhcCCCcEEEeeC
Q 020320 206 -YEDIEEKFDVLYDTI---GD--C----KNSFVVAKDNAPIVDITW 241 (327)
Q Consensus 206 -~~~~~~~~d~v~d~~---g~--~----~~~~~~l~~~g~~v~~g~ 241 (327)
+.+...++|++|+++ |. + ...++.+++++.+++++.
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~ 285 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA 285 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence 122235799999998 53 1 567899999999998854
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.14 E-value=2.2e-05 Score=72.14 Aligned_cols=99 Identities=22% Similarity=0.282 Sum_probs=76.6
Q ss_pred HHHHHHhc-CCC-CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320 137 AIEGFKTA-GFK-TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD 214 (327)
Q Consensus 137 a~~~l~~~-~~~-~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d 214 (327)
.|+++.+. ++. .|++++|.| .|.+|..+++.++.+ |++++++..++.+...+...|++ +. ++.+...++|
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~-Ga~ViV~d~dp~ra~~A~~~G~~-v~-----~l~eal~~aD 269 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGL-GARVIVTEVDPICALQAAMDGFR-VM-----TMEEAAELGD 269 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCchhhHHHHhcCCE-ec-----CHHHHHhCCC
Confidence 56666554 444 899999999 899999999999998 99988888888877666666765 22 2344556899
Q ss_pred EEEeCCCCc----hhhhhhhcCCCcEEEeeCCC
Q 020320 215 VLYDTIGDC----KNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 215 ~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~ 243 (327)
++++++|.. ...+..+++++.++..|...
T Consensus 270 VVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 270 IFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 999999854 35678889999998887644
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.00 E-value=9.7e-05 Score=65.29 Aligned_cols=91 Identities=21% Similarity=0.395 Sum_probs=72.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---h
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---K 224 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~ 224 (327)
.+++++|+| .|.+|++++..++.+ |+++.+..+++++.+.++++|++.+. . .+..+...++|++|++++.. .
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~-Ga~V~v~~r~~~~~~~~~~~G~~~~~-~--~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKAL-GANVTVGARKSAHLARITEMGLSPFH-L--SELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeeec-H--HHHHHHhCCCCEEEECCChhhhhH
Confidence 689999999 899999999999998 89888888988888888888876431 1 23344557899999998733 4
Q ss_pred hhhhhhcCCCcEEEeeCCC
Q 020320 225 NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 225 ~~~~~l~~~g~~v~~g~~~ 243 (327)
..+..+++++.++.++..+
T Consensus 226 ~~l~~~~~g~vIIDla~~p 244 (296)
T PRK08306 226 EVLSKMPPEALIIDLASKP 244 (296)
T ss_pred HHHHcCCCCcEEEEEccCC
Confidence 5667789999988886544
No 135
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.95 E-value=9.6e-05 Score=67.61 Aligned_cols=99 Identities=22% Similarity=0.289 Sum_probs=75.6
Q ss_pred HHHHHHhc-C-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320 137 AIEGFKTA-G-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD 214 (327)
Q Consensus 137 a~~~l~~~-~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d 214 (327)
.|.++.+. + ...|++|+|.| .|.+|+.+++.++.+ |++++++..++.+...+...|+. +.+ ..+.+.+.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----leeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGM-GARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhC-cCEEEEEeCChhhHHHHHhcCCE-eCC-----HHHHHhcCC
Confidence 44555432 3 47899999999 999999999999998 99988888888777777777763 221 233456789
Q ss_pred EEEeCCCCc----hhhhhhhcCCCcEEEeeCCC
Q 020320 215 VLYDTIGDC----KNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 215 ~v~d~~g~~----~~~~~~l~~~g~~v~~g~~~ 243 (327)
++|+++|.. ...+..+++++.++..|...
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 999999854 34678899999999887653
No 136
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.90 E-value=0.00015 Score=63.38 Aligned_cols=159 Identities=19% Similarity=0.267 Sum_probs=94.8
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhh---hccCc
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKE----LGADKVIDYRKTKYED---IEEKF 213 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~---~~~~~ 213 (327)
...++++++||.+| +|. |..+.++++.. +. +++.++.+++..+.+++ ++.+.+- ....++.. ....+
T Consensus 72 ~~~~~~g~~VLDiG-~G~-G~~~~~~a~~~-g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~~~l~~~~~~f 147 (272)
T PRK11873 72 LAELKPGETVLDLG-SGG-GFDCFLAARRV-GPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEIEALPVADNSV 147 (272)
T ss_pred hccCCCCCEEEEeC-CCC-CHHHHHHHHHh-CCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcchhhCCCCCCce
Confidence 46788999999999 788 98888888877 54 57778888888888765 3433221 11111211 11368
Q ss_pred cEEEeC-CC----C----chhhhhhhcCCCcEEEeeCCCCCCc--eeeE------EeecCHHHHHHHHhHHHC-CCceee
Q 020320 214 DVLYDT-IG----D----CKNSFVVAKDNAPIVDITWPPSHPR--AIYS------SLTVSGEILEKLRPFIES-GKLKAQ 275 (327)
Q Consensus 214 d~v~d~-~g----~----~~~~~~~l~~~g~~v~~g~~~~~~~--~~~~------~~~~~~~~~~~~~~l~~~-g~~~~~ 275 (327)
|+|+.. +- . ...+.+.|+++|+++..+.....+. .... ..........++.+++++ |-....
T Consensus 148 D~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~ 227 (272)
T PRK11873 148 DVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDIT 227 (272)
T ss_pred eEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceE
Confidence 999844 31 1 2567889999999998765432211 0000 000001123456666665 433333
Q ss_pred eCCCcccchhhHHHHHHHH--HhCCCCceEEE
Q 020320 276 IDPTGPYKFKDVIEAFRYL--ETGRARGKVVI 305 (327)
Q Consensus 276 ~~~~~~~~~~~i~~a~~~~--~~~~~~gk~vv 305 (327)
......++++++.++++.+ ......++.+.
T Consensus 228 i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 228 IQPKREYRIPDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred EEeccceecccHHHHHHHhccccccccCceEE
Confidence 3345678889999999888 54444444443
No 137
>PLN02494 adenosylhomocysteinase
Probab=97.80 E-value=0.00015 Score=67.08 Aligned_cols=88 Identities=23% Similarity=0.233 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--- 223 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--- 223 (327)
-.|++++|.| .|.+|..+++.++.+ |++++++..++.+...+...|+..+ ...+.+..+|+++.+.|..
T Consensus 252 LaGKtVvViG-yG~IGr~vA~~aka~-Ga~VIV~e~dp~r~~eA~~~G~~vv------~leEal~~ADVVI~tTGt~~vI 323 (477)
T PLN02494 252 IAGKVAVICG-YGDVGKGCAAAMKAA-GARVIVTEIDPICALQALMEGYQVL------TLEDVVSEADIFVTTTGNKDII 323 (477)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhHHHHhcCCeec------cHHHHHhhCCEEEECCCCccch
Confidence 5799999999 999999999999998 9998888788877667777776532 2344556899999998843
Q ss_pred -hhhhhhhcCCCcEEEeeCC
Q 020320 224 -KNSFVVAKDNAPIVDITWP 242 (327)
Q Consensus 224 -~~~~~~l~~~g~~v~~g~~ 242 (327)
...+..+++++.++.+|..
T Consensus 324 ~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 324 MVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred HHHHHhcCCCCCEEEEcCCC
Confidence 5678999999999999864
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.59 E-value=0.00032 Score=62.59 Aligned_cols=105 Identities=20% Similarity=0.277 Sum_probs=73.4
Q ss_pred cceecCCCCCCHHhhccc-chHHHHHHHHHHhcCC----CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-
Q 020320 113 SLIAKKPKNISFEEAASL-PLAVQTAIEGFKTAGF----KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK- 186 (327)
Q Consensus 113 ~~~~~~p~~~~~~~aa~~-~~~~~ta~~~l~~~~~----~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~- 186 (327)
...+++|+.+..+.+... +.+. ++++++.+.. .++.+|+|.| +|.+|..+++.++..++.+++++.+++++
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~sv--~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra 215 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVSI--SSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA 215 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcCH--HHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 456778888877777655 5444 6666654332 4789999999 79999999999988623456666677775
Q ss_pred HHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320 187 VEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 187 ~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 223 (327)
.++++++|.+ +++. ++..+.+..+|++|.+++..
T Consensus 216 ~~la~~~g~~-~~~~--~~~~~~l~~aDvVi~at~~~ 249 (311)
T cd05213 216 EELAKELGGN-AVPL--DELLELLNEADVVISATGAP 249 (311)
T ss_pred HHHHHHcCCe-EEeH--HHHHHHHhcCCEEEECCCCC
Confidence 4677888874 3322 12344456799999999865
No 139
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.52 E-value=0.0011 Score=57.16 Aligned_cols=138 Identities=19% Similarity=0.205 Sum_probs=86.4
Q ss_pred CCCCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEc
Q 020320 77 TKFNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVG 156 (327)
Q Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~g 156 (327)
+.+++||+++..+ .|.+|.. +...++.+++++++..+.--.... ....+.. ...++++||-.|
T Consensus 65 ~p~~~g~~~~i~p-------------~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~~--~l~~l~~-~~~~~~~VLDiG 127 (250)
T PRK00517 65 HPIRIGDRLWIVP-------------SWEDPPD-PDEINIELDPGMAFGTGTHPTTRL--CLEALEK-LVLPGKTVLDVG 127 (250)
T ss_pred CCEEEcCCEEEEC-------------CCcCCCC-CCeEEEEECCCCccCCCCCHHHHH--HHHHHHh-hcCCCCEEEEeC
Confidence 3477898877654 4555544 677888898888777654222111 2222322 256889999999
Q ss_pred CCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHc----CC-CEEEeCCCCChhhhccCccEEEeCCCC------ch
Q 020320 157 GAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKEL----GA-DKVIDYRKTKYEDIEEKFDVLYDTIGD------CK 224 (327)
Q Consensus 157 a~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~----g~-~~v~~~~~~~~~~~~~~~d~v~d~~g~------~~ 224 (327)
||. |..++.+++ . |. +++.++.++...+.+++. +. +.+.-.. .+ ..+|+++..... ..
T Consensus 128 -cGs-G~l~i~~~~-~-g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~-~~-----~~fD~Vvani~~~~~~~l~~ 197 (250)
T PRK00517 128 -CGS-GILAIAAAK-L-GAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ-GD-----LKADVIVANILANPLLELAP 197 (250)
T ss_pred -CcH-HHHHHHHHH-c-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc-CC-----CCcCEEEEcCcHHHHHHHHH
Confidence 887 887776665 4 55 477788888887776542 22 1111000 00 158999865542 14
Q ss_pred hhhhhhcCCCcEEEeeC
Q 020320 225 NSFVVAKDNAPIVDITW 241 (327)
Q Consensus 225 ~~~~~l~~~g~~v~~g~ 241 (327)
...+.|+++|.++..+.
T Consensus 198 ~~~~~LkpgG~lilsgi 214 (250)
T PRK00517 198 DLARLLKPGGRLILSGI 214 (250)
T ss_pred HHHHhcCCCcEEEEEEC
Confidence 66788999999988754
No 140
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.52 E-value=0.0016 Score=60.49 Aligned_cols=90 Identities=26% Similarity=0.276 Sum_probs=70.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc-
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC- 223 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~- 223 (327)
..-.|++++|.| .|.+|..+++.++.+ |++++++..++.+...+...|+..+ .+.+.++.+|+++.+.|..
T Consensus 250 ~~LaGKtVgVIG-~G~IGr~vA~rL~a~-Ga~ViV~e~dp~~a~~A~~~G~~~~------~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 250 VMIAGKTVVVCG-YGDVGKGCAQALRGF-GARVVVTEIDPICALQAAMEGYQVV------TLEDVVETADIFVTATGNKD 321 (476)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHhcCceec------cHHHHHhcCCEEEECCCccc
Confidence 346799999999 999999999999998 9988887777666545555565422 2445567899999998842
Q ss_pred ---hhhhhhhcCCCcEEEeeCC
Q 020320 224 ---KNSFVVAKDNAPIVDITWP 242 (327)
Q Consensus 224 ---~~~~~~l~~~g~~v~~g~~ 242 (327)
...+..|++++.++.+|..
T Consensus 322 iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 322 IITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred ccCHHHHhccCCCcEEEEcCCC
Confidence 4678899999999998754
No 141
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.36 E-value=0.0015 Score=59.73 Aligned_cols=92 Identities=24% Similarity=0.371 Sum_probs=65.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEEEeCC-CCChhhhccCccEEEeCC---CC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKVIDYR-KTKYEDIEEKFDVLYDTI---GD 222 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v~~~~-~~~~~~~~~~~d~v~d~~---g~ 222 (327)
++.+++|+| +|.+|+.+++.++.+ |++++++++++++.+.+. .++........ ...+.+.+..+|++++++ +.
T Consensus 166 ~~~~VlViG-aG~vG~~aa~~a~~l-Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 166 EPGDVTIIG-GGVVGTNAAKMANGL-GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCceEEEEc-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 345699999 799999999999999 888888888887776664 45543222211 123444557899999997 32
Q ss_pred ------chhhhhhhcCCCcEEEeeC
Q 020320 223 ------CKNSFVVAKDNAPIVDITW 241 (327)
Q Consensus 223 ------~~~~~~~l~~~g~~v~~g~ 241 (327)
....+..+++++.++.++.
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva~ 268 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVAI 268 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEec
Confidence 1456677899999998764
No 142
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.32 E-value=0.00051 Score=66.57 Aligned_cols=77 Identities=19% Similarity=0.405 Sum_probs=57.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC---------------------cccHHHHHHcCCCEEEeCCC
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS---------------------TPKVEFVKELGADKVIDYRK 203 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~---------------------~~~~~~~~~~g~~~v~~~~~ 203 (327)
...+|++|+|+| +|++|+++++.++.+ |.+++++... +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~-G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIG-GGPAGLSAAYHLRRM-GHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 467899999999 899999999999998 8888877642 23556778899887665432
Q ss_pred -CC--hhhhccCccEEEeCCCCc
Q 020320 204 -TK--YEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 204 -~~--~~~~~~~~d~v~d~~g~~ 223 (327)
.+ ......++|.+|+++|..
T Consensus 211 ~~~~~~~~~~~~~D~Vi~AtG~~ 233 (564)
T PRK12771 211 GEDITLEQLEGEFDAVFVAIGAQ 233 (564)
T ss_pred CCcCCHHHHHhhCCEEEEeeCCC
Confidence 22 222234799999999953
No 143
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.20 E-value=0.00072 Score=63.02 Aligned_cols=150 Identities=15% Similarity=0.234 Sum_probs=91.7
Q ss_pred CcccccccEEEEEeCCCCCCCCCCCEEEEe-cc-cccccCcCC-----CCCceeeEEEeeccceecCCCCCCHHhhccc-
Q 020320 59 AVPGCDMAGIVVAKGTSVTKFNTGDEVYGN-IQ-DFNAEGKLK-----QLGALAEFIVVEESLIAKKPKNISFEEAASL- 130 (327)
Q Consensus 59 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-~~-~~~~~~~~~-----~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~- 130 (327)
..-|||+++-+.+|+++..+.-+|+.-++- .. -+..|...+ ..+.|+. .+++|..+..+.+...
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~--------a~~~~k~v~~~t~i~~~ 161 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK--------AFSVAKRVRTETGIGAG 161 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHhhHhhhcCCCCC
Confidence 345999999999999999887777764411 00 011111001 1122222 2344444433333222
Q ss_pred chHHHHHHHHHHhcC----CCCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccH-HHHHHcCCCEEEeCCCC
Q 020320 131 PLAVQTAIEGFKTAG----FKTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKV-EFVKELGADKVIDYRKT 204 (327)
Q Consensus 131 ~~~~~ta~~~l~~~~----~~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~-~~~~~~g~~~v~~~~~~ 204 (327)
+.+ .++++++.+. ..++++++|+| +|.+|.+++..++.. |. +++++.+++++. .+++++|.+ +++. .
T Consensus 162 ~~S--v~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~ 234 (423)
T PRK00045 162 AVS--VASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEK-GVRKITVANRTLERAEELAEEFGGE-AIPL--D 234 (423)
T ss_pred CcC--HHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--H
Confidence 333 3667775332 36789999999 899999999999987 76 566677887764 467778864 3322 2
Q ss_pred ChhhhccCccEEEeCCCCc
Q 020320 205 KYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 205 ~~~~~~~~~d~v~d~~g~~ 223 (327)
+......++|++|+++|+.
T Consensus 235 ~~~~~l~~aDvVI~aT~s~ 253 (423)
T PRK00045 235 ELPEALAEADIVISSTGAP 253 (423)
T ss_pred HHHHHhccCCEEEECCCCC
Confidence 2334456899999999854
No 144
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.14 E-value=0.0017 Score=53.01 Aligned_cols=73 Identities=23% Similarity=0.398 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC---CEEEeCCCCC----hhhhc----cCccEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA---DKVIDYRKTK----YEDIE----EKFDVL 216 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~---~~v~~~~~~~----~~~~~----~~~d~v 216 (327)
-|.+|||+||++++|++.++-...+ |.++|+.-+++++++.++..-. +.+.|-.+.+ +...+ ...+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 4789999999999999988888888 9999999999999988876442 3333333322 22222 357889
Q ss_pred EeCCC
Q 020320 217 YDTIG 221 (327)
Q Consensus 217 ~d~~g 221 (327)
++++|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 98888
No 145
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.13 E-value=0.0024 Score=49.55 Aligned_cols=93 Identities=18% Similarity=0.347 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHH-HHcCCCE--EEeCCCCChhhhccCccEEEeCCCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFV-KELGADK--VIDYRKTKYEDIEEKFDVLYDTIGD 222 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~-~~~g~~~--v~~~~~~~~~~~~~~~d~v~d~~g~ 222 (327)
-.+.+++|+| +|+.|.+++..+... |++ +.++-++.+|.+.+ ++++... ++.. ++.......+|+++++++.
T Consensus 10 l~~~~vlviG-aGg~ar~v~~~L~~~-g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~--~~~~~~~~~~DivI~aT~~ 85 (135)
T PF01488_consen 10 LKGKRVLVIG-AGGAARAVAAALAAL-GAKEITIVNRTPERAEALAEEFGGVNIEAIPL--EDLEEALQEADIVINATPS 85 (135)
T ss_dssp GTTSEEEEES-SSHHHHHHHHHHHHT-TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG--GGHCHHHHTESEEEE-SST
T ss_pred cCCCEEEEEC-CHHHHHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHcCccccceeeH--HHHHHHHhhCCeEEEecCC
Confidence 4689999999 799999999999988 887 55555887765444 5664332 2222 2233345689999999874
Q ss_pred chh--hhhhhcCC----CcEEEeeCCC
Q 020320 223 CKN--SFVVAKDN----APIVDITWPP 243 (327)
Q Consensus 223 ~~~--~~~~l~~~----g~~v~~g~~~ 243 (327)
... .-..+.+. +.++.++.|.
T Consensus 86 ~~~~i~~~~~~~~~~~~~~v~Dla~Pr 112 (135)
T PF01488_consen 86 GMPIITEEMLKKASKKLRLVIDLAVPR 112 (135)
T ss_dssp TSTSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred CCcccCHHHHHHHHhhhhceeccccCC
Confidence 321 11223333 4666776544
No 146
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.12 E-value=0.0019 Score=54.34 Aligned_cols=73 Identities=25% Similarity=0.438 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCC--EE--EeCCCC-Chh-------hhccCcc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGAD--KV--IDYRKT-KYE-------DIEEKFD 214 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~--~v--~~~~~~-~~~-------~~~~~~d 214 (327)
.++.++|+||++++|.++++.+... |++++.+.+..++++.+ .+++.. .. +|-.+. ... +....+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 4578999999999999999999988 99999999999988666 567731 22 232221 111 1125799
Q ss_pred EEEeCCC
Q 020320 215 VLYDTIG 221 (327)
Q Consensus 215 ~v~d~~g 221 (327)
++++..|
T Consensus 84 iLvNNAG 90 (246)
T COG4221 84 ILVNNAG 90 (246)
T ss_pred EEEecCC
Confidence 9999998
No 147
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.08 E-value=0.0031 Score=55.48 Aligned_cols=91 Identities=21% Similarity=0.356 Sum_probs=67.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---h
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---K 224 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~ 224 (327)
.|++++|+| .|.+|.+++..++.+ |.++++..+++++...+.++|...+ . -.+..+...++|++++++... .
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~-G~~V~v~~R~~~~~~~~~~~g~~~~-~--~~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSAL-GARVFVGARSSADLARITEMGLIPF-P--LNKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeee-c--HHHHHHHhccCCEEEECCChHHhCH
Confidence 578999999 899999999999998 8888888888877777767775432 1 122344557899999998632 3
Q ss_pred hhhhhhcCCCcEEEeeCCC
Q 020320 225 NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 225 ~~~~~l~~~g~~v~~g~~~ 243 (327)
..+..++++..++.++..+
T Consensus 225 ~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred HHHhcCCCCeEEEEeCcCC
Confidence 4566778877777776543
No 148
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.02 E-value=0.14 Score=45.23 Aligned_cols=151 Identities=18% Similarity=0.181 Sum_probs=88.2
Q ss_pred EEEEEeCCCCCCCCCCCEEEEecccc-------------cccCc----CCCCCceeeEEEeeccceecCCCCCCHHhhcc
Q 020320 67 GIVVAKGTSVTKFNTGDEVYGNIQDF-------------NAEGK----LKQLGALAEFIVVEESLIAKKPKNISFEEAAS 129 (327)
Q Consensus 67 G~V~~vG~~v~~~~~Gd~V~~~~~~~-------------~~~~~----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~ 129 (327)
|.-.-+-|++.++.+|.|++++-+-- ...+. ....-.|-+|.++..+..+.- +.+..-+
T Consensus 37 GfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~----~~e~~~~ 112 (314)
T PF11017_consen 37 GFATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP----EREDWQM 112 (314)
T ss_pred eEEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc----chhHHHH
Confidence 33344448889999999999875310 00000 011224555655554443311 2222222
Q ss_pred cchH-HHHHHHHHH---hcCCCCCCEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEeCCcccHHHHHHcC-CCEEEeCCC
Q 020320 130 LPLA-VQTAIEGFK---TAGFKTGQTIFIVGGAGGVGTLVIQLAK-HFYGASHVVATTSTPKVEFVKELG-ADKVIDYRK 203 (327)
Q Consensus 130 ~~~~-~~ta~~~l~---~~~~~~~~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~~~~~~~~~~~~~g-~~~v~~~~~ 203 (327)
+.-+ +.|.|..-. ....-..+.|+|..|++-.++..+..++ .. +...++...|.......+.+| .|.|+.+++
T Consensus 113 LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~-~~~~~vglTS~~N~~Fve~lg~Yd~V~~Yd~ 191 (314)
T PF11017_consen 113 LLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQR-GPPKVVGLTSARNVAFVESLGCYDEVLTYDD 191 (314)
T ss_pred HHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccC-CCceEEEEecCcchhhhhccCCceEEeehhh
Confidence 3222 345554322 2334566889999999999999999888 44 555666666667777889999 588887644
Q ss_pred CChhhhccCccEEEeCCCCc
Q 020320 204 TKYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 204 ~~~~~~~~~~d~v~d~~g~~ 223 (327)
-.... ...--+++|..|..
T Consensus 192 i~~l~-~~~~~v~VDfaG~~ 210 (314)
T PF11017_consen 192 IDSLD-APQPVVIVDFAGNG 210 (314)
T ss_pred hhhcc-CCCCEEEEECCCCH
Confidence 22111 13445777999953
No 149
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.02 E-value=0.0063 Score=48.19 Aligned_cols=92 Identities=17% Similarity=0.232 Sum_probs=65.0
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 223 (327)
.-.-.|++++|.| -|.+|..+++.++.+ |++++++..+|-+.-.+..-|.+.. .+.+.....|+++-++|..
T Consensus 18 ~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~~dGf~v~------~~~~a~~~adi~vtaTG~~ 89 (162)
T PF00670_consen 18 NLMLAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRALQAAMDGFEVM------TLEEALRDADIFVTATGNK 89 (162)
T ss_dssp -S--TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHHHTT-EEE-------HHHHTTT-SEEEE-SSSS
T ss_pred ceeeCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHHHHhhhcCcEec------CHHHHHhhCCEEEECCCCc
Confidence 4456899999999 999999999999999 9999999998887776766676522 2455667899999999853
Q ss_pred ----hhhhhhhcCCCcEEEeeCCC
Q 020320 224 ----KNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g~~~ 243 (327)
...+..|+++..+...|...
T Consensus 90 ~vi~~e~~~~mkdgail~n~Gh~d 113 (162)
T PF00670_consen 90 DVITGEHFRQMKDGAILANAGHFD 113 (162)
T ss_dssp SSB-HHHHHHS-TTEEEEESSSST
T ss_pred cccCHHHHHHhcCCeEEeccCcCc
Confidence 56788899998888887544
No 150
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.78 E-value=0.0061 Score=49.67 Aligned_cols=106 Identities=23% Similarity=0.268 Sum_probs=75.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--- 223 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--- 223 (327)
-.|.+|.|+| .|.+|..+++.++.+ |.++++..++........+.+... .++.+.....|+++.+....
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~~~~~~~~~~~~~------~~l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAF-GMRVIGYDRSPKPEEGADEFGVEY------VSLDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSCHHHHHHHHTTEEE------SSHHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecC-CceeEEecccCChhhhccccccee------eehhhhcchhhhhhhhhcccccc
Confidence 4689999999 999999999999998 999999998877665445555321 13555667799999887621
Q ss_pred -----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 224 -----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 224 -----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
...+..++++..++.++-... + +-+.+++.+++|++.
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aRG~~----------v---de~aL~~aL~~g~i~ 147 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVARGEL----------V---DEDALLDALESGKIA 147 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSSGGG----------B----HHHHHHHHHTTSEE
T ss_pred ceeeeeeeeeccccceEEEeccchhh----------h---hhhHHHHHHhhccCc
Confidence 456788898888888753221 1 134678889999987
No 151
>PRK08324 short chain dehydrogenase; Validated
Probab=96.72 E-value=0.0056 Score=60.76 Aligned_cols=108 Identities=20% Similarity=0.249 Sum_probs=66.9
Q ss_pred ceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320 103 ALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182 (327)
Q Consensus 103 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~ 182 (327)
++++|..+++..++.+ +..+.+++.... .......+|++++|+||+|.+|.++++.+... |.+++++.+
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~---------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~r 454 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQR---------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAE-GACVVLADL 454 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhc---------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEeC
Confidence 4566766666666655 444555543110 00122346899999999999999999998888 899888888
Q ss_pred CcccHHHH-HHcCC--CE-EE--eCCCCC-hhhh-------ccCccEEEeCCC
Q 020320 183 STPKVEFV-KELGA--DK-VI--DYRKTK-YEDI-------EEKFDVLYDTIG 221 (327)
Q Consensus 183 ~~~~~~~~-~~~g~--~~-v~--~~~~~~-~~~~-------~~~~d~v~d~~g 221 (327)
++++.+.+ ++++. .. .+ |-.+.. .... .+++|++|+++|
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 87765544 33443 11 11 222211 1111 147999999998
No 152
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.69 E-value=0.0089 Score=51.50 Aligned_cols=75 Identities=25% Similarity=0.380 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcC----CC-EEE--eCCCCChhhhc-------
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELG----AD-KVI--DYRKTKYEDIE------- 210 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g----~~-~v~--~~~~~~~~~~~------- 210 (327)
...+.+++|+||++++|...+..+... |.+++.+.|++++++.+ +++. .. .++ |-.+.+....+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~-g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 356789999999999999987777777 99999999999988666 3333 21 133 32222211111
Q ss_pred -cCccEEEeCCC
Q 020320 211 -EKFDVLYDTIG 221 (327)
Q Consensus 211 -~~~d~v~d~~g 221 (327)
..+|++++++|
T Consensus 82 ~~~IdvLVNNAG 93 (265)
T COG0300 82 GGPIDVLVNNAG 93 (265)
T ss_pred CCcccEEEECCC
Confidence 26999999998
No 153
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.59 E-value=0.041 Score=51.20 Aligned_cols=149 Identities=15% Similarity=0.272 Sum_probs=91.7
Q ss_pred CcccccccEEEEEeCCCCCCCCCCCEEEEeccc----ccccC-----cCCCCCceeeEEEeeccceecCCCCCCHHhhcc
Q 020320 59 AVPGCDMAGIVVAKGTSVTKFNTGDEVYGNIQD----FNAEG-----KLKQLGALAEFIVVEESLIAKKPKNISFEEAAS 129 (327)
Q Consensus 59 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~----~~~~~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~ 129 (327)
..-|.|+++-+.+|+++..+.-+|+.-++ ++ +..|. +....+.|++++.++. .+.. -.+++..
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~--gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~-~t~i~~~---- 159 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQIL--GQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRT-ETDISAG---- 159 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHHH--HHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhh-hcCCCCC----
Confidence 34588999999999999988777776542 11 11111 1123356777776654 2221 0111110
Q ss_pred cchHHHHHHHHH----HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccH-HHHHHcCCCEEEeCCC
Q 020320 130 LPLAVQTAIEGF----KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKV-EFVKELGADKVIDYRK 203 (327)
Q Consensus 130 ~~~~~~ta~~~l----~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~-~~~~~~g~~~v~~~~~ 203 (327)
+.++ ++.++ +..+..++++++|+| +|.+|..+++.++.. | .+++++.++.++. ++++++|... +..
T Consensus 160 -~vSv--~~~Av~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~-G~~~V~v~~rs~~ra~~la~~~g~~~-i~~-- 231 (417)
T TIGR01035 160 -AVSI--SSAAVELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRK-GVGKILIANRTYERAEDLAKELGGEA-VKF-- 231 (417)
T ss_pred -CcCH--HHHHHHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCeE-eeH--
Confidence 1111 23332 334456789999999 799999999999987 7 5666777777764 4667777642 222
Q ss_pred CChhhhccCccEEEeCCCCc
Q 020320 204 TKYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 204 ~~~~~~~~~~d~v~d~~g~~ 223 (327)
.+......++|++|.|++..
T Consensus 232 ~~l~~~l~~aDvVi~aT~s~ 251 (417)
T TIGR01035 232 EDLEEYLAEADIVISSTGAP 251 (417)
T ss_pred HHHHHHHhhCCEEEECCCCC
Confidence 13344557899999999854
No 154
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.56 E-value=0.0043 Score=54.14 Aligned_cols=96 Identities=25% Similarity=0.430 Sum_probs=57.8
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhhhccCccEE
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKVIDYRKTKYEDIEEKFDVL 216 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~d~v 216 (327)
++.+++++|++||-+| || -|-.+..+++.. |+++..++.|+++.++++ +.|....+.-...++.+....+|.+
T Consensus 55 ~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~~-g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~I 131 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIG-CG-WGGLAIYAAERY-GCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDRI 131 (273)
T ss_dssp HTTTT--TT-EEEEES--T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SEE
T ss_pred HHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHc-CcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCEE
Confidence 4678999999999999 77 677888899987 999999999999888774 3453211111112333333478887
Q ss_pred Ee-----CCCCc------hhhhhhhcCCCcEEEe
Q 020320 217 YD-----TIGDC------KNSFVVAKDNAPIVDI 239 (327)
Q Consensus 217 ~d-----~~g~~------~~~~~~l~~~g~~v~~ 239 (327)
+. .+|.. ..+.+.|+|+|+++.-
T Consensus 132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 63 23321 4456889999998754
No 155
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.50 E-value=0.035 Score=47.15 Aligned_cols=42 Identities=24% Similarity=0.377 Sum_probs=36.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+++++|+|++|.+|..+++.+... |.+++.+.+++++.+.+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~ 45 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRM 45 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4689999999999999999999888 99999999887766554
No 156
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.48 E-value=0.036 Score=45.83 Aligned_cols=101 Identities=17% Similarity=0.143 Sum_probs=69.6
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc----HHHHHHcCCCEEEeCCCCChh--hhc
Q 020320 137 AIEGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK----VEFVKELGADKVIDYRKTKYE--DIE 210 (327)
Q Consensus 137 a~~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~----~~~~~~~g~~~v~~~~~~~~~--~~~ 210 (327)
...+++...++++++||=+| .+.|..++-+++.. + +++.+.+.++- ...++.+|.+.|.....+... ...
T Consensus 61 vA~m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~-~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~ 136 (209)
T COG2518 61 VARMLQLLELKPGDRVLEIG--TGSGYQAAVLARLV-G-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEE 136 (209)
T ss_pred HHHHHHHhCCCCCCeEEEEC--CCchHHHHHHHHHh-C-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCC
Confidence 44456788999999999998 45688889999976 5 77777776663 333567887554322222211 122
Q ss_pred cCccEEEeCCC--C-chhhhhhhcCCCcEEEeeC
Q 020320 211 EKFDVLYDTIG--D-CKNSFVVAKDNAPIVDITW 241 (327)
Q Consensus 211 ~~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~g~ 241 (327)
..+|.++-+.+ . +...+..|+++|+++..-.
T Consensus 137 aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 137 APYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 46899986665 2 3677899999999988644
No 157
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.38 E-value=0.0062 Score=49.60 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=51.5
Q ss_pred EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCCC
Q 020320 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIGD 222 (327)
Q Consensus 152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g~ 222 (327)
|+|+||+|.+|...++.+... +.++.+.++++++.+. ..+.+.+. |..+ +.+...+.++|.+|.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 789999999999999999988 8999999999887766 44444332 2222 2234456799999999984
No 158
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.29 E-value=0.011 Score=56.53 Aligned_cols=79 Identities=19% Similarity=0.273 Sum_probs=54.9
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-Hc--------CC-----CEEE--eCCC-CC
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-EL--------GA-----DKVI--DYRK-TK 205 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~--------g~-----~~v~--~~~~-~~ 205 (327)
..+.+.|++++|+||+|.+|..++..+... |.+++++.++.++...+. ++ |. -.++ |-.+ ++
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 466788999999999999999998888877 999999888877654332 11 21 1122 2222 22
Q ss_pred hhhhccCccEEEeCCCC
Q 020320 206 YEDIEEKFDVLYDTIGD 222 (327)
Q Consensus 206 ~~~~~~~~d~v~d~~g~ 222 (327)
+...+.++|++|.++|.
T Consensus 153 I~~aLggiDiVVn~AG~ 169 (576)
T PLN03209 153 IGPALGNASVVICCIGA 169 (576)
T ss_pred HHHHhcCCCEEEEcccc
Confidence 33345789999999873
No 159
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=96.28 E-value=0.052 Score=44.99 Aligned_cols=96 Identities=17% Similarity=0.281 Sum_probs=64.4
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHH----HcC-CCEE--EeCCCCChhhhc-c
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVK----ELG-ADKV--IDYRKTKYEDIE-E 211 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~----~~g-~~~v--~~~~~~~~~~~~-~ 211 (327)
+...++.++++++-.| +|. |..++.+++..+ +.+++.++.+++..+.++ .++ .+.+ +..+..++.... .
T Consensus 33 l~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~ 110 (198)
T PRK00377 33 LSKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINE 110 (198)
T ss_pred HHHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCC
Confidence 4567889999999999 777 888889888762 246778888888777653 456 3332 222222222222 4
Q ss_pred CccEEEeCCCC------chhhhhhhcCCCcEEE
Q 020320 212 KFDVLYDTIGD------CKNSFVVAKDNAPIVD 238 (327)
Q Consensus 212 ~~d~v~d~~g~------~~~~~~~l~~~g~~v~ 238 (327)
.+|.+|...+. ...+.+.|+++|+++.
T Consensus 111 ~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 111 KFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 69999975542 2456678899999874
No 160
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.021 Score=49.76 Aligned_cols=71 Identities=21% Similarity=0.335 Sum_probs=50.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCC-Chhhh-------ccCccEEEeCC
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKT-KYEDI-------EEKFDVLYDTI 220 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~-------~~~~d~v~d~~ 220 (327)
+++||+||+|.+|...++.+... |.+++++.+++++.+.+.+.+...+ .|..+. ...+. ..++|+++++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999888877 9999988888777666655554433 233221 11111 14689999998
Q ss_pred C
Q 020320 221 G 221 (327)
Q Consensus 221 g 221 (327)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 7
No 161
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.024 Score=49.59 Aligned_cols=73 Identities=16% Similarity=0.292 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCC-hh---hhc-----cCccEEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTK-YE---DIE-----EKFDVLY 217 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~-~~---~~~-----~~~d~v~ 217 (327)
.+++++|+||+|++|.+.++.+... |.+++++.+++++.+.+.+.+.+.+. |-.+.. .. +.. ..+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999999999999998888777 99999999888877766665554332 322211 11 111 3689999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 162
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.17 E-value=0.036 Score=48.20 Aligned_cols=73 Identities=25% Similarity=0.423 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCE-EE----eCCC-CChh-------hhc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADK-VI----DYRK-TKYE-------DIE 210 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~-v~----~~~~-~~~~-------~~~ 210 (327)
.|+.|+|+||++++|.+++.-.-.. |++.+.+.+..++++.+ ++.+... ++ |-.+ ++.. ...
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~-G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKR-GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5789999999999998866555556 99999999887777666 3344322 22 2111 1111 123
Q ss_pred cCccEEEeCCC
Q 020320 211 EKFDVLYDTIG 221 (327)
Q Consensus 211 ~~~d~v~d~~g 221 (327)
.++|+++++.|
T Consensus 90 g~vDvLVNNAG 100 (282)
T KOG1205|consen 90 GRVDVLVNNAG 100 (282)
T ss_pred CCCCEEEecCc
Confidence 58999999988
No 163
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.08 E-value=0.034 Score=52.97 Aligned_cols=72 Identities=19% Similarity=0.275 Sum_probs=54.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD 222 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~ 222 (327)
+.++++|+|+| .|..|++++.+++.. |+++++.+..+.+.+.++++|...+...+ ....+..+|+++.+.|-
T Consensus 9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~-G~~v~~~D~~~~~~~~l~~~g~~~~~~~~---~~~~l~~~D~VV~SpGi 80 (488)
T PRK03369 9 LLPGAPVLVAG-AGVTGRAVLAALTRF-GARPTVCDDDPDALRPHAERGVATVSTSD---AVQQIADYALVVTSPGF 80 (488)
T ss_pred ccCCCeEEEEc-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHhCCCEEEcCcc---hHhHhhcCCEEEECCCC
Confidence 45789999999 899999999999998 99999888766666666777875432211 12234578999999883
No 164
>PRK06182 short chain dehydrogenase; Validated
Probab=96.05 E-value=0.022 Score=49.61 Aligned_cols=73 Identities=19% Similarity=0.311 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCC-Chhhhc-------cCccEEEe
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKT-KYEDIE-------EKFDVLYD 218 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~~-------~~~d~v~d 218 (327)
.+++++|+|++|.+|..++..+... |.+++++.+++++.+.+...+...+ .|-.+. ...... .++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3678999999999999999888877 9999988888777665554454332 232221 111111 37899999
Q ss_pred CCC
Q 020320 219 TIG 221 (327)
Q Consensus 219 ~~g 221 (327)
+.|
T Consensus 81 ~ag 83 (273)
T PRK06182 81 NAG 83 (273)
T ss_pred CCC
Confidence 987
No 165
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.04 E-value=0.063 Score=47.36 Aligned_cols=111 Identities=18% Similarity=0.088 Sum_probs=66.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCC-EEEeCCCCChhhhccCccEEEeCC
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGAD-KVIDYRKTKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~d~v~d~~ 220 (327)
..++++||-+| ||. |..++.+++ ++..+++.++.++...+.+++ .+.. .+..............+|+++...
T Consensus 157 ~~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~ 233 (288)
T TIGR00406 157 DLKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI 233 (288)
T ss_pred cCCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence 45789999999 887 877777776 424477788888887766654 2221 111111111111124789998654
Q ss_pred C-C-----chhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCcee
Q 020320 221 G-D-----CKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKA 274 (327)
Q Consensus 221 g-~-----~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 274 (327)
. . .....+.|+++|.++..|.. .+....+.+.++++ +..
T Consensus 234 ~~~~l~~ll~~~~~~LkpgG~li~sgi~--------------~~~~~~v~~~~~~~-f~~ 278 (288)
T TIGR00406 234 LAEVIKELYPQFSRLVKPGGWLILSGIL--------------ETQAQSVCDAYEQG-FTV 278 (288)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEeCc--------------HhHHHHHHHHHHcc-Cce
Confidence 3 1 14556889999998876532 23345566666665 443
No 166
>PRK07060 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.048 Score=46.48 Aligned_cols=73 Identities=21% Similarity=0.376 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE-eCCCCC-hhhh---ccCccEEEeCCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI-DYRKTK-YEDI---EEKFDVLYDTIG 221 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~-~~~~~~-~~~~---~~~~d~v~d~~g 221 (327)
.+++++|+|++|.+|..+++.+... |.+++++.+++++.+.+ +..+...+. |..+.. .... ..++|++|++.|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 5689999999999999999999887 88888888877665444 344443322 222211 1111 246899999887
No 167
>PRK14967 putative methyltransferase; Provisional
Probab=95.96 E-value=0.31 Score=41.15 Aligned_cols=128 Identities=16% Similarity=0.160 Sum_probs=74.1
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE-EEeCCCCChhhhccCccE
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK-VIDYRKTKYEDIEEKFDV 215 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~~d~ 215 (327)
+....+.++++||-.| ||. |..+..+++.- ..+++.++.++...+.+++ .+... ++..+-.+. .....+|+
T Consensus 29 l~~~~~~~~~~vLDlG-cG~-G~~~~~la~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~ 104 (223)
T PRK14967 29 LAAEGLGPGRRVLDLC-TGS-GALAVAAAAAG-AGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDV 104 (223)
T ss_pred HHhcccCCCCeEEEec-CCH-HHHHHHHHHcC-CCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeE
Confidence 4455678889999998 777 88888888742 3377788888877765543 34322 222111111 11246899
Q ss_pred EEeCCC---C---------------------------chhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHh
Q 020320 216 LYDTIG---D---------------------------CKNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRP 265 (327)
Q Consensus 216 v~d~~g---~---------------------------~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (327)
++...+ . ...+.+.|+++|+++.+..... .+.++++
T Consensus 105 Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~~--------------~~~~~~~ 170 (223)
T PRK14967 105 VVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSELS--------------GVERTLT 170 (223)
T ss_pred EEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEeccc--------------CHHHHHH
Confidence 886422 0 0235578899999875422110 2345666
Q ss_pred HHHCCCceeeeCCCcccchhh
Q 020320 266 FIESGKLKAQIDPTGPYKFKD 286 (327)
Q Consensus 266 l~~~g~~~~~~~~~~~~~~~~ 286 (327)
++++..+.......+.+++..
T Consensus 171 ~l~~~g~~~~~~~~~~~~~~~ 191 (223)
T PRK14967 171 RLSEAGLDAEVVASQWIPFGP 191 (223)
T ss_pred HHHHCCCCeEEEEeeccCccH
Confidence 676666554433345556644
No 168
>PRK06139 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.038 Score=49.76 Aligned_cols=73 Identities=23% Similarity=0.464 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-E--eCCCC-Chhhh-------ccC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-I--DYRKT-KYEDI-------EEK 212 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~--~~~~~-~~~~~-------~~~ 212 (327)
.+++++|+||+|++|.++++.+... |++++++.+++++++.+ ++.|.+.. + |-.+. ..... ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5689999999999999999988887 99999888887766433 33454432 2 22221 11111 146
Q ss_pred ccEEEeCCC
Q 020320 213 FDVLYDTIG 221 (327)
Q Consensus 213 ~d~v~d~~g 221 (327)
+|++++++|
T Consensus 85 iD~lVnnAG 93 (330)
T PRK06139 85 IDVWVNNVG 93 (330)
T ss_pred CCEEEECCC
Confidence 899999987
No 169
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.052 Score=46.66 Aligned_cols=72 Identities=24% Similarity=0.276 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccHHHHHHcCCCEEE--eCCC-CChhhhccCccEEEeCCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKVEFVKELGADKVI--DYRK-TKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~~~~~~~g~~~v~--~~~~-~~~~~~~~~~d~v~d~~g 221 (327)
.+++++|+||+|++|.+.++.+... |.+++++.+++ ++.+... .+....+ |-.+ ....+...++|++++++|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG 88 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQLASLDVLILNHG 88 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence 3689999999999999988888777 89988888765 2222111 1111222 2221 122233467999999987
No 170
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.88 E-value=0.084 Score=45.90 Aligned_cols=99 Identities=25% Similarity=0.463 Sum_probs=67.8
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhhhccCccEEE
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYEDIEEKFDVLY 217 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~d~v~ 217 (327)
+..+++||+++|=+| ||- |.+++.+|+.. +++++.++-|+++.+.+++ .|...-+.-.-.++.+..+.+|.++
T Consensus 66 ~kl~L~~G~~lLDiG-CGW-G~l~~~aA~~y-~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~e~fDrIv 142 (283)
T COG2230 66 EKLGLKPGMTLLDIG-CGW-GGLAIYAAEEY-GVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFEEPFDRIV 142 (283)
T ss_pred HhcCCCCCCEEEEeC-CCh-hHHHHHHHHHc-CCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccccccccceee
Confidence 679999999999998 764 77788899987 9999999999998877754 5543111111112222223467665
Q ss_pred -----eCCCC------chhhhhhhcCCCcEEEeeCCC
Q 020320 218 -----DTIGD------CKNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 218 -----d~~g~------~~~~~~~l~~~g~~v~~g~~~ 243 (327)
+.+|. ...+.+.|+++|+++.-....
T Consensus 143 SvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 143 SVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred ehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 23443 155678999999998876544
No 171
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.83 E-value=0.031 Score=49.97 Aligned_cols=70 Identities=20% Similarity=0.307 Sum_probs=50.8
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g 221 (327)
+|+|+||+|-+|..++..+... |.++.+.+++.++.......+.+.+. |..+ ..+...+.++|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 6999999999999998888877 88888888887655544555655433 2222 234445678999999875
No 172
>PRK06057 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.06 Score=46.34 Aligned_cols=73 Identities=22% Similarity=0.343 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCC-hhhh-------ccCccEEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTK-YEDI-------EEKFDVLY 217 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~-~~~~-------~~~~d~v~ 217 (327)
.+++++|+||+|.+|.+.++.+... |.+++++.+++.+.+.. ++++...+ .|..+.. .... ..++|.++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999999999999999888877 99998888876655433 44544322 2222211 1111 13689999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
.+.|
T Consensus 85 ~~ag 88 (255)
T PRK06057 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 8876
No 173
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=95.81 E-value=0.038 Score=40.85 Aligned_cols=89 Identities=26% Similarity=0.300 Sum_probs=58.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-c---C-CCEE-EeCCCC-ChhhhccCccEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-L---G-ADKV-IDYRKT-KYEDIEEKFDVLYDTI 220 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~---g-~~~v-~~~~~~-~~~~~~~~~d~v~d~~ 220 (327)
|+.+||-+| ||. |..+..+++...+.+++.++.+++..+.+++ . + .+.+ +...+. ........+|+++...
T Consensus 1 p~~~vLDlG-cG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLG-CGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEET-TTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEc-CcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence 678999998 554 7888888885458999999999998877754 2 2 2222 211111 1122335799999766
Q ss_pred -C---C---------chhhhhhhcCCCcEEE
Q 020320 221 -G---D---------CKNSFVVAKDNAPIVD 238 (327)
Q Consensus 221 -g---~---------~~~~~~~l~~~g~~v~ 238 (327)
. - .....+.|+|+|+++.
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 2 1 2345678899998875
No 174
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=95.80 E-value=0.058 Score=49.58 Aligned_cols=102 Identities=23% Similarity=0.333 Sum_probs=67.3
Q ss_pred HHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCcc
Q 020320 136 TAIEGF-KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFD 214 (327)
Q Consensus 136 ta~~~l-~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d 214 (327)
..+..+ +..+++++++||-+| || .|..+..+++.. +.+++.++.++++.+.+++......+.....++......+|
T Consensus 154 ~k~~~l~~~l~l~~g~rVLDIG-cG-~G~~a~~la~~~-g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~l~~~fD 230 (383)
T PRK11705 154 AKLDLICRKLQLKPGMRVLDIG-CG-WGGLARYAAEHY-GVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRDLNGQFD 230 (383)
T ss_pred HHHHHHHHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhhcCCCCC
Confidence 344444 567889999999998 64 677778888876 88999999999999888764321111111112222234688
Q ss_pred EEEeC-----CCC------chhhhhhhcCCCcEEEee
Q 020320 215 VLYDT-----IGD------CKNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 215 ~v~d~-----~g~------~~~~~~~l~~~g~~v~~g 240 (327)
.++.. +|. ...+.+.|+|+|.++...
T Consensus 231 ~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 231 RIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred EEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 88643 332 145667999999988754
No 175
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=95.78 E-value=0.095 Score=46.86 Aligned_cols=96 Identities=21% Similarity=0.252 Sum_probs=64.8
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhh---hc
Q 020320 140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVK----ELGADKVIDYRKTKYED---IE 210 (327)
Q Consensus 140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~---~~ 210 (327)
.++...++++++||..| +| .|..++.+++.. +. .++.++.+++..+.++ +.|.+.+..... +... ..
T Consensus 72 ll~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~-~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~~ 147 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIG-GG-TGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPEF 147 (322)
T ss_pred HHHhcCCCCCCEEEEEe-CC-ccHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-Chhhccccc
Confidence 34556788999999999 66 599999999876 53 4777778887665553 466654332211 1111 12
Q ss_pred cCccEEEeCCCC---chhhhhhhcCCCcEEEe
Q 020320 211 EKFDVLYDTIGD---CKNSFVVAKDNAPIVDI 239 (327)
Q Consensus 211 ~~~d~v~d~~g~---~~~~~~~l~~~g~~v~~ 239 (327)
..+|+++.+.+. +...++.|+++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 468999987763 25667889999998764
No 176
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=95.76 E-value=0.15 Score=41.38 Aligned_cols=116 Identities=16% Similarity=0.182 Sum_probs=74.0
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE--EeCCCCChhhhccCcc
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV--IDYRKTKYEDIEEKFD 214 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~~~d 214 (327)
+...++++|+.++=.| +| .|..+++++......+++++.+++++.+..+ ++|.+.+ +-.+..........+|
T Consensus 27 ls~L~~~~g~~l~DIG-aG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~~~d 104 (187)
T COG2242 27 LSKLRPRPGDRLWDIG-AG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLPSPD 104 (187)
T ss_pred HHhhCCCCCCEEEEeC-CC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCCCCC
Confidence 3568889999887777 33 3556667775544678888889999887774 5887654 3222222222334689
Q ss_pred EEEeCCC-Cc----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCc
Q 020320 215 VLYDTIG-DC----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKL 272 (327)
Q Consensus 215 ~v~d~~g-~~----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 272 (327)
.+|---| .. +.++..|+++|++|.-.. .-+.+..+++.+++...
T Consensus 105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~nai--------------tlE~~~~a~~~~~~~g~ 153 (187)
T COG2242 105 AIFIGGGGNIEEILEAAWERLKPGGRLVANAI--------------TLETLAKALEALEQLGG 153 (187)
T ss_pred EEEECCCCCHHHHHHHHHHHcCcCCeEEEEee--------------cHHHHHHHHHHHHHcCC
Confidence 9996554 22 677889999999876432 22445555666665444
No 177
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.70 E-value=0.07 Score=44.06 Aligned_cols=73 Identities=21% Similarity=0.274 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc----CCCEEE-eCCC-CChhhhccCccEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL----GADKVI-DYRK-TKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~----g~~~v~-~~~~-~~~~~~~~~~d~v~d~~ 220 (327)
.+.+++|+|++|.+|.+++..+... |.+++++.++.++.+.+ +++ +..... +..+ .+......++|+++.++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~-g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLARE-GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 5689999998899999888877776 78888777777665443 223 322211 1111 22234457899999987
Q ss_pred C
Q 020320 221 G 221 (327)
Q Consensus 221 g 221 (327)
.
T Consensus 106 ~ 106 (194)
T cd01078 106 A 106 (194)
T ss_pred C
Confidence 5
No 178
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.037 Score=49.00 Aligned_cols=73 Identities=19% Similarity=0.314 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCC--CEE---EeCCCC-Chhh-------hccCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGA--DKV---IDYRKT-KYED-------IEEKF 213 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~--~~v---~~~~~~-~~~~-------~~~~~ 213 (327)
.+++++|+|++|++|.++++.+... |++++++.+++++.+.+ ++++. ... .|-.+. .... ....+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHAR-GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999988887 99988888877765443 44542 211 122211 1111 12468
Q ss_pred cEEEeCCC
Q 020320 214 DVLYDTIG 221 (327)
Q Consensus 214 d~v~d~~g 221 (327)
|+++++.|
T Consensus 87 d~vI~nAG 94 (296)
T PRK05872 87 DVVVANAG 94 (296)
T ss_pred CEEEECCC
Confidence 99999988
No 179
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.093 Score=44.22 Aligned_cols=71 Identities=15% Similarity=0.244 Sum_probs=47.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh---h---hc--cCccEEEeCCC
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE---D---IE--EKFDVLYDTIG 221 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~---~~--~~~d~v~d~~g 221 (327)
++++|+|++|.+|...+..+... |.+++++.+++++.+.+++++....+..+-.+.. . .. .++|+++.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 57999999999999988877777 8999988888777665555442222211111111 1 11 36899998876
No 180
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.55 E-value=0.09 Score=45.46 Aligned_cols=73 Identities=26% Similarity=0.404 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCC-EEEeCCCCChh---hh-------ccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGAD-KVIDYRKTKYE---DI-------EEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~---~~-------~~~~d~ 215 (327)
.+++++|+||++++|.+++..+... |.+++++.+++++.+.+. +++.. ..+..+-.+.. .. ..++|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4789999999999999988888877 999988888877665543 34421 12211111111 11 146899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++++.|
T Consensus 84 li~~ag 89 (263)
T PRK06200 84 FVGNAG 89 (263)
T ss_pred EEECCC
Confidence 998877
No 181
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.072 Score=45.81 Aligned_cols=43 Identities=21% Similarity=0.406 Sum_probs=36.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
..+++++|+|++|.+|.+++..+... |++++++.+++++.+.+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~ 49 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKEL 49 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 35789999999999999999888887 99988888887765444
No 182
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.092 Score=45.68 Aligned_cols=72 Identities=24% Similarity=0.355 Sum_probs=48.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcC-CCEE-EeCCCC-Chhh-------hccCccEEE
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELG-ADKV-IDYRKT-KYED-------IEEKFDVLY 217 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g-~~~v-~~~~~~-~~~~-------~~~~~d~v~ 217 (327)
+.+++|+||+|++|...+..+... |.++++..+++++.+.+ ++++ ...+ .|-.+. .+.. ...++|+++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999999999999988877777 99988888887765443 4454 2221 122221 1111 124689999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
++.|
T Consensus 84 ~~ag 87 (273)
T PRK07825 84 NNAG 87 (273)
T ss_pred ECCC
Confidence 9987
No 183
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.53 E-value=0.31 Score=45.26 Aligned_cols=78 Identities=13% Similarity=0.274 Sum_probs=51.6
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEE-EEeCCcccH-HHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC
Q 020320 145 GFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHV-VATTSTPKV-EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD 222 (327)
Q Consensus 145 ~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v-~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~ 222 (327)
+--.+.+++|+| +|.+|.+++..+... |+..+ ++-++.++. .++++++...++.. ++....+..+|++|.|+++
T Consensus 177 ~~l~~kkvlviG-aG~~a~~va~~L~~~-g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--~~l~~~l~~aDiVI~aT~a 252 (414)
T PRK13940 177 DNISSKNVLIIG-AGQTGELLFRHVTAL-APKQIMLANRTIEKAQKITSAFRNASAHYL--SELPQLIKKADIIIAAVNV 252 (414)
T ss_pred cCccCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHhcCCeEecH--HHHHHHhccCCEEEECcCC
Confidence 335678999999 799999988888887 76544 444676654 44456652223221 1223445689999999997
Q ss_pred chhh
Q 020320 223 CKNS 226 (327)
Q Consensus 223 ~~~~ 226 (327)
....
T Consensus 253 ~~~v 256 (414)
T PRK13940 253 LEYI 256 (414)
T ss_pred CCee
Confidence 6433
No 184
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.079 Score=45.80 Aligned_cols=75 Identities=23% Similarity=0.453 Sum_probs=48.9
Q ss_pred CCCCCEEEEEcCCc-hHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-----cCCCEE--E--eCCCC-Chhhh-----
Q 020320 146 FKTGQTIFIVGGAG-GVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-----LGADKV--I--DYRKT-KYEDI----- 209 (327)
Q Consensus 146 ~~~~~~vlI~ga~g-~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-----~g~~~v--~--~~~~~-~~~~~----- 209 (327)
+..+++++|+|++| ++|.++++.+... |.++++..+++++.+...+ ++...+ + |-.+. .....
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 34578999999886 8999999988888 8988888777665543321 443322 2 22111 11111
Q ss_pred --ccCccEEEeCCC
Q 020320 210 --EEKFDVLYDTIG 221 (327)
Q Consensus 210 --~~~~d~v~d~~g 221 (327)
...+|+++.+.|
T Consensus 93 ~~~g~id~li~~ag 106 (262)
T PRK07831 93 ERLGRLDVLVNNAG 106 (262)
T ss_pred HHcCCCCEEEECCC
Confidence 146899999987
No 185
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=95.48 E-value=0.22 Score=37.32 Aligned_cols=96 Identities=14% Similarity=0.226 Sum_probs=62.4
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE--EeCCCCC-hhhhccCcc
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV--IDYRKTK-YEDIEEKFD 214 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~-~~~~~~~~d 214 (327)
....+.++++++-+| +|. |..+..+++...+.+++.++.++...+.++ .++.+.+ +..+... .......+|
T Consensus 13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 90 (124)
T TIGR02469 13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD 90 (124)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence 455667788999998 766 888889998764567788888888776653 3443322 2221111 111224799
Q ss_pred EEEeCCC--C----chhhhhhhcCCCcEEEe
Q 020320 215 VLYDTIG--D----CKNSFVVAKDNAPIVDI 239 (327)
Q Consensus 215 ~v~d~~g--~----~~~~~~~l~~~g~~v~~ 239 (327)
.++...+ . ...+.+.|+++|.++..
T Consensus 91 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 91 RVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred EEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 9986543 1 25677899999998764
No 186
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.48 E-value=0.063 Score=46.44 Aligned_cols=73 Identities=23% Similarity=0.367 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCE-EE--eCCCC-Chhh-------hccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADK-VI--DYRKT-KYED-------IEEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~-v~--~~~~~-~~~~-------~~~~~d~ 215 (327)
.+++++|+||+|++|.++++.+... |.+++++.+++++.+.+.+ .+... .+ |-.+. .... ...++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999999999999988888777 9999988887766554443 33221 12 22111 1111 1146899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++++.|
T Consensus 83 li~~Ag 88 (262)
T TIGR03325 83 LIPNAG 88 (262)
T ss_pred EEECCC
Confidence 998876
No 187
>PRK12742 oxidoreductase; Provisional
Probab=95.48 E-value=0.099 Score=44.30 Aligned_cols=73 Identities=26% Similarity=0.429 Sum_probs=47.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHH-HHHHcCCCEEE-eCCCC-Chhhh---ccCccEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVE-FVKELGADKVI-DYRKT-KYEDI---EEKFDVLYDTI 220 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~-~~~~~g~~~v~-~~~~~-~~~~~---~~~~d~v~d~~ 220 (327)
.+++++|+|++|.+|.++++.+... |.+++.+.+ ++++.+ +..+++...+. |..+. ..... ..++|++++++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 4789999999999999999888877 888776654 444333 33455654332 22111 11111 24589999998
Q ss_pred C
Q 020320 221 G 221 (327)
Q Consensus 221 g 221 (327)
|
T Consensus 84 g 84 (237)
T PRK12742 84 G 84 (237)
T ss_pred C
Confidence 7
No 188
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.44 E-value=0.047 Score=47.59 Aligned_cols=91 Identities=19% Similarity=0.309 Sum_probs=70.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC-CC-EEEeCCCCChhhhccCccEEEeCC---C
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG-AD-KVIDYRKTKYEDIEEKFDVLYDTI---G 221 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~~~~d~v~d~~---g 221 (327)
.++ +|.|+| .|.+|.-++.+|--+ |+++.+.+.|.+|++.+..+- .. +.+.++...+.....++|+++.++ |
T Consensus 167 ~~~-kv~iiG-GGvvgtnaAkiA~gl-gA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpg 243 (371)
T COG0686 167 LPA-KVVVLG-GGVVGTNAAKIAIGL-GADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPG 243 (371)
T ss_pred CCc-cEEEEC-CccccchHHHHHhcc-CCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecC
Confidence 444 567777 799999999999998 999999999999999997644 33 234455566666778999999875 3
Q ss_pred C------chhhhhhhcCCCcEEEee
Q 020320 222 D------CKNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 222 ~------~~~~~~~l~~~g~~v~~g 240 (327)
. ....++.|+|++.++++.
T Consensus 244 akaPkLvt~e~vk~MkpGsVivDVA 268 (371)
T COG0686 244 AKAPKLVTREMVKQMKPGSVIVDVA 268 (371)
T ss_pred CCCceehhHHHHHhcCCCcEEEEEE
Confidence 2 166788999999998874
No 189
>PRK04148 hypothetical protein; Provisional
Probab=95.39 E-value=0.1 Score=40.04 Aligned_cols=75 Identities=20% Similarity=0.173 Sum_probs=50.9
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
.....+.++++.| +| .|...+..++.+ |..+++++.++...+.+++.+.+.+.+.--..-...-+++|++...=.
T Consensus 12 ~~~~~~~kileIG-~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirp 86 (134)
T PRK04148 12 YEKGKNKKIVELG-IG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRP 86 (134)
T ss_pred cccccCCEEEEEE-ec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCC
Confidence 3334568899999 88 887555555567 999999999999999898888765553222211222356777775543
No 190
>PRK06196 oxidoreductase; Provisional
Probab=95.38 E-value=0.1 Score=46.63 Aligned_cols=73 Identities=19% Similarity=0.322 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhh------h----ccCccEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYED------I----EEKFDVL 216 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~------~----~~~~d~v 216 (327)
.+++++|+||+|++|.+++..+... |.+++++.+++++.+.+ .++..-..+..+-.+..+ . ..++|++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 4689999999999999988887777 89999888887655433 333211122111112111 1 1468999
Q ss_pred EeCCC
Q 020320 217 YDTIG 221 (327)
Q Consensus 217 ~d~~g 221 (327)
+.++|
T Consensus 104 i~nAg 108 (315)
T PRK06196 104 INNAG 108 (315)
T ss_pred EECCC
Confidence 99887
No 191
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.33 E-value=0.12 Score=45.16 Aligned_cols=73 Identities=21% Similarity=0.212 Sum_probs=46.2
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEEEeCCCCChhh----------hcc
Q 020320 148 TGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKVIDYRKTKYED----------IEE 211 (327)
Q Consensus 148 ~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~----------~~~ 211 (327)
.++++||+||++ ++|.++++.+... |+++++..++++..+.+ +++|....+..+-.+..+ ...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 578999999876 9999988888777 99988877664322222 334533322222222111 124
Q ss_pred CccEEEeCCC
Q 020320 212 KFDVLYDTIG 221 (327)
Q Consensus 212 ~~d~v~d~~g 221 (327)
.+|++++++|
T Consensus 85 ~iD~lVnnAG 94 (271)
T PRK06505 85 KLDFVVHAIG 94 (271)
T ss_pred CCCEEEECCc
Confidence 6899999887
No 192
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.12 Score=44.63 Aligned_cols=41 Identities=17% Similarity=0.328 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
+++++||+|++|.+|.+.++.+... |.+++++.+++++.+.
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~ 49 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDE 49 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 5789999999999999999888877 8999888887765543
No 193
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.13 Score=45.50 Aligned_cols=73 Identities=22% Similarity=0.406 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCE-EE--eCCCC-Chhhh-------ccC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADK-VI--DYRKT-KYEDI-------EEK 212 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~-v~--~~~~~-~~~~~-------~~~ 212 (327)
.+++++|+||+|++|.+.++.+... |.+++++.+++++.+.+ ++ .+.+. .+ |-.+. ..... ..+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4588999999999999998888777 99999988887665433 22 23221 22 22111 11111 237
Q ss_pred ccEEEeCCC
Q 020320 213 FDVLYDTIG 221 (327)
Q Consensus 213 ~d~v~d~~g 221 (327)
+|+++.++|
T Consensus 118 id~li~~AG 126 (293)
T PRK05866 118 VDILINNAG 126 (293)
T ss_pred CCEEEECCC
Confidence 899999987
No 194
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.25 E-value=0.26 Score=39.68 Aligned_cols=94 Identities=18% Similarity=0.215 Sum_probs=58.3
Q ss_pred ccchHHHHHHHHHHh-cCCCCCCEEEEEcCCch-HHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh
Q 020320 129 SLPLAVQTAIEGFKT-AGFKTGQTIFIVGGAGG-VGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY 206 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~-~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (327)
..|+....+...++. ..--.+.+++|+| +|. +|..++..++.. |+++.++.++.+ +.
T Consensus 23 ~~p~~~~a~v~l~~~~~~~l~gk~vlViG-~G~~~G~~~a~~L~~~-g~~V~v~~r~~~-------------------~l 81 (168)
T cd01080 23 FIPCTPAGILELLKRYGIDLAGKKVVVVG-RSNIVGKPLAALLLNR-NATVTVCHSKTK-------------------NL 81 (168)
T ss_pred ccCChHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHhhC-CCEEEEEECCch-------------------hH
Confidence 334443344444443 3346889999999 564 699888888887 887666555421 22
Q ss_pred hhhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320 207 EDIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 207 ~~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~ 243 (327)
.+.+..+|+||.++++.+. ....++++-.++.++.+.
T Consensus 82 ~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~pr 119 (168)
T cd01080 82 KEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred HHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCC
Confidence 3345568899988886531 113455665666676654
No 195
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.25 E-value=0.15 Score=44.12 Aligned_cols=73 Identities=18% Similarity=0.183 Sum_probs=45.9
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccHH----HHHHcCCCEEEeCCCCChhh----------hcc
Q 020320 148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKVE----FVKELGADKVIDYRKTKYED----------IEE 211 (327)
Q Consensus 148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~~----~~~~~g~~~v~~~~~~~~~~----------~~~ 211 (327)
.+++++|+||+ +++|.++++.+... |++++++.++++..+ ..++++....+.-+-.+..+ ...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999987 48999988877777 899888877654322 22334432233222222211 114
Q ss_pred CccEEEeCCC
Q 020320 212 KFDVLYDTIG 221 (327)
Q Consensus 212 ~~d~v~d~~g 221 (327)
++|++++++|
T Consensus 88 ~ld~lv~nAg 97 (258)
T PRK07533 88 RLDFLLHSIA 97 (258)
T ss_pred CCCEEEEcCc
Confidence 6899998876
No 196
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.19 E-value=0.28 Score=42.91 Aligned_cols=95 Identities=22% Similarity=0.246 Sum_probs=66.1
Q ss_pred ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..+ --.|++++|+|.+..+|.-++.++... |+++.+.-+.. .+..
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~-gatVtv~~s~t-------------------~~l~ 196 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQK-NASVTILHSRS-------------------KDMA 196 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCc-------------------hhHH
Confidence 45665555555566544 357899999996666999999999988 88777665431 2234
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
+..+.+|++|.++|..+ -.-..++++..++.+|.+.
T Consensus 197 ~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 197 SYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCc
Confidence 45567899999999652 2224578888888888754
No 197
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.14 E-value=0.36 Score=38.42 Aligned_cols=96 Identities=20% Similarity=0.259 Sum_probs=57.2
Q ss_pred cccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh
Q 020320 128 ASLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY 206 (327)
Q Consensus 128 a~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (327)
.++|++....+..++..+ --.|++++|.|.+..+|.-...+++.. ++.+.+.-... .+.
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~-~atVt~~h~~T-------------------~~l 73 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK-GATVTICHSKT-------------------KNL 73 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT-T-EEEEE-TTS-------------------SSH
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC-CCeEEeccCCC-------------------Ccc
Confidence 344555545555565544 357899999998889999998888887 77665433222 233
Q ss_pred hhhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320 207 EDIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 207 ~~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~ 243 (327)
.+..+.+|+++.++|..+. .-..++++..++.+|...
T Consensus 74 ~~~~~~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 74 QEITRRADIVVSAVGKPNLIKADWIKPGAVVIDVGINY 111 (160)
T ss_dssp HHHHTTSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEE
T ss_pred cceeeeccEEeeeeccccccccccccCCcEEEecCCcc
Confidence 4445678899999986633 335678888888887644
No 198
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.12 E-value=0.14 Score=40.36 Aligned_cols=81 Identities=21% Similarity=0.315 Sum_probs=50.5
Q ss_pred HHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH-HHHcCCCEEEeCCCCChhhhccCccEEE
Q 020320 140 GFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF-VKELGADKVIDYRKTKYEDIEEKFDVLY 217 (327)
Q Consensus 140 ~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~d~v~ 217 (327)
+++...+ ..+.+++|.| +|.+|...+..+...++.++.+..+++++.+. +++++... +.....+..+..+++|+++
T Consensus 9 a~~~~~~~~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dvvi 86 (155)
T cd01065 9 ALEEAGIELKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEELLAEADLII 86 (155)
T ss_pred HHHhhCCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhhccccCCEEE
Confidence 3444443 4578899999 69999988888877622556666677665544 45555431 0001122333357899999
Q ss_pred eCCCC
Q 020320 218 DTIGD 222 (327)
Q Consensus 218 d~~g~ 222 (327)
.+++.
T Consensus 87 ~~~~~ 91 (155)
T cd01065 87 NTTPV 91 (155)
T ss_pred eCcCC
Confidence 99863
No 199
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.1 Score=44.82 Aligned_cols=73 Identities=21% Similarity=0.327 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE--EEeCCCCChh---hh-------ccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK--VIDYRKTKYE---DI-------EEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~---~~-------~~~~d~ 215 (327)
.+++++|+||+|.+|..+++.+... |.+++++.++++......++.... .+..+-.+.. .. ..++|.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999988888777 899888888766554444433211 1211111111 11 136899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.++|
T Consensus 93 vi~~ag 98 (255)
T PRK06841 93 LVNSAG 98 (255)
T ss_pred EEECCC
Confidence 999887
No 200
>PRK05867 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.16 Score=43.59 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+++++|+|+++++|.+++..+... |.+++++.+++++.+.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 49 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKL 49 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence 4789999999999999998888877 99998888876655433
No 201
>PRK06180 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.11 Score=45.46 Aligned_cols=74 Identities=22% Similarity=0.187 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc-CCCE-EE--eCCCC-Chhhh-------ccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL-GADK-VI--DYRKT-KYEDI-------EEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~-g~~~-v~--~~~~~-~~~~~-------~~~~d~ 215 (327)
.+++++|+|++|.+|.+.++.+... |.+++++.+++++.+.+.+. +... .+ |-.+. ..... ..++|.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3578999999999999998888877 99999988887766555443 2211 12 22211 11111 136899
Q ss_pred EEeCCCC
Q 020320 216 LYDTIGD 222 (327)
Q Consensus 216 v~d~~g~ 222 (327)
++.+.|.
T Consensus 82 vv~~ag~ 88 (277)
T PRK06180 82 LVNNAGY 88 (277)
T ss_pred EEECCCc
Confidence 9999873
No 202
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.93 E-value=0.18 Score=43.13 Aligned_cols=41 Identities=27% Similarity=0.399 Sum_probs=34.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
.+++++|+|++|.+|..+++.+... |.+++++.+++++.+.
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~ 44 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEE 44 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 4789999999999999999988887 8888888887665443
No 203
>PRK07109 short chain dehydrogenase; Provisional
Probab=94.93 E-value=0.16 Score=45.83 Aligned_cols=73 Identities=18% Similarity=0.267 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-E--eCCCC-Chhhh-------ccC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-I--DYRKT-KYEDI-------EEK 212 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~--~~~~~-~~~~~-------~~~ 212 (327)
.+++++|+||+|++|.++++.+... |.+++++.+++++.+.+ ++.|.+.. + |-.+. ..... ..+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 4679999999999999998888877 89998888887765433 23454332 2 22221 11111 246
Q ss_pred ccEEEeCCC
Q 020320 213 FDVLYDTIG 221 (327)
Q Consensus 213 ~d~v~d~~g 221 (327)
+|++++++|
T Consensus 86 iD~lInnAg 94 (334)
T PRK07109 86 IDTWVNNAM 94 (334)
T ss_pred CCEEEECCC
Confidence 899999987
No 204
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=94.91 E-value=0.12 Score=47.19 Aligned_cols=89 Identities=22% Similarity=0.327 Sum_probs=61.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHHHcC---C-CEEEeCCCC-ChhhhccCccEEEeCCCCc
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVKELG---A-DKVIDYRKT-KYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~~~g---~-~~v~~~~~~-~~~~~~~~~d~v~d~~g~~ 223 (327)
.+|||+| +|.+|..+++.+... + .++.+++++.++.+.+.... . ...+|-.+. .....+.+.|+|+++....
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~-~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQN-GDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 5789999 799999999997777 5 78999999988888776553 2 223443332 3444567889999999743
Q ss_pred --hhhh-hhhcCCCcEEEee
Q 020320 224 --KNSF-VVAKDNAPIVDIT 240 (327)
Q Consensus 224 --~~~~-~~l~~~g~~v~~g 240 (327)
..++ .|++.+=.++...
T Consensus 80 ~~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 80 VDLTILKACIKTGVDYVDTS 99 (389)
T ss_pred hhHHHHHHHHHhCCCEEEcc
Confidence 3333 5555565666554
No 205
>PRK07677 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.15 Score=43.85 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=33.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
+++++|+|++|++|.+.++.+... |.++++..+++++.+.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~ 41 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEA 41 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 478999999999999998888877 89888888877655433
No 206
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.16 Score=43.76 Aligned_cols=75 Identities=23% Similarity=0.299 Sum_probs=49.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCC--EEE--eCCCCC-hhh-------hccC
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGAD--KVI--DYRKTK-YED-------IEEK 212 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~--~v~--~~~~~~-~~~-------~~~~ 212 (327)
.-++.++||+||+|.+|..++..+... |.+++++.++++..+.+.+ .... ..+ |..+.. ... ...+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEA-GARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG 86 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 357789999999999999998888877 8888888887665544433 2211 122 222111 111 1247
Q ss_pred ccEEEeCCC
Q 020320 213 FDVLYDTIG 221 (327)
Q Consensus 213 ~d~v~d~~g 221 (327)
+|.++.+.|
T Consensus 87 ~d~vi~~ag 95 (264)
T PRK12829 87 LDVLVNNAG 95 (264)
T ss_pred CCEEEECCC
Confidence 899998887
No 207
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.89 E-value=0.12 Score=50.89 Aligned_cols=74 Identities=16% Similarity=0.348 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc---------------------cHHHHHHcCCCEEEeCCC---
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP---------------------KVEFVKELGADKVIDYRK--- 203 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~---------------------~~~~~~~~g~~~v~~~~~--- 203 (327)
.+++|+|+| +|+.|+.++..++.. |.++.+....+. +.++++++|.+..++..-
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~~-G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 386 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILARA-GVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD 386 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHc-CCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc
Confidence 489999999 899999999999988 888888875542 345667788776554421
Q ss_pred CChhhhccCccEEEeCCCCc
Q 020320 204 TKYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 204 ~~~~~~~~~~d~v~d~~g~~ 223 (327)
..+.....++|.+|.++|..
T Consensus 387 ~~~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 387 ITFSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred CCHHHHHhcCCEEEEeCCCC
Confidence 12333345799999999853
No 208
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.88 E-value=0.19 Score=43.89 Aligned_cols=73 Identities=25% Similarity=0.308 Sum_probs=46.1
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcc---cHH-HHHHcCCCEEEeCCCCChhh----------hcc
Q 020320 148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTP---KVE-FVKELGADKVIDYRKTKYED----------IEE 211 (327)
Q Consensus 148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~---~~~-~~~~~g~~~v~~~~~~~~~~----------~~~ 211 (327)
.+++++|+||+ +++|.++++.+... |+++++..++++ +.+ ..++++....+.-+-.+... ...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999986 79999988877777 899888777642 222 22345533333221122111 124
Q ss_pred CccEEEeCCC
Q 020320 212 KFDVLYDTIG 221 (327)
Q Consensus 212 ~~d~v~d~~g 221 (327)
++|++++++|
T Consensus 83 ~iDilVnnAG 92 (274)
T PRK08415 83 KIDFIVHSVA 92 (274)
T ss_pred CCCEEEECCc
Confidence 6899999887
No 209
>PLN03139 formate dehydrogenase; Provisional
Probab=94.88 E-value=0.18 Score=46.31 Aligned_cols=86 Identities=27% Similarity=0.291 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|++|.|+| .|.+|...++.++.+ |.++++..++....+..++.|+..+ .++.+.....|+++-+....
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~af-G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPF-NCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHC-CCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhhCCEEEEeCCCCHHHH
Confidence 578999999 999999999999987 9999888776544444455554321 23555667789998777632
Q ss_pred ----hhhhhhhcCCCcEEEee
Q 020320 224 ----KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g 240 (327)
...+..|+++..++.++
T Consensus 271 ~li~~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNA 291 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECC
Confidence 34567777777777664
No 210
>PRK08265 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.18 Score=43.54 Aligned_cols=73 Identities=22% Similarity=0.289 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EE--eCCCC-Chhhh-------ccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VI--DYRKT-KYEDI-------EEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~--~~~~~-~~~~~-------~~~~d~ 215 (327)
.+++++|+|++|.+|.+++..+... |.+++++.+++++.+.+ ++++... .+ |-.+. ..... ...+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999988888877 99998888877654433 4455321 12 22211 11111 146899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.+.|
T Consensus 84 lv~~ag 89 (261)
T PRK08265 84 LVNLAC 89 (261)
T ss_pred EEECCC
Confidence 999877
No 211
>PRK07574 formate dehydrogenase; Provisional
Probab=94.84 E-value=0.21 Score=45.83 Aligned_cols=86 Identities=22% Similarity=0.246 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|++|.|+| .|.+|...++.++.+ |.++++..++....+..+.++.... .++.+.....|+|+-+....
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~f-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPF-DVKLHYTDRHRLPEEVEQELGLTYH-----VSFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCCchhhHhhcCceec-----CCHHHHhhcCCEEEEcCCCCHHHH
Confidence 578899999 999999999999987 9999988876544444444553211 23555667889999887632
Q ss_pred ----hhhhhhhcCCCcEEEee
Q 020320 224 ----KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g 240 (327)
...+..|+++..++.++
T Consensus 264 ~li~~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTA 284 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECC
Confidence 34567778887777765
No 212
>PRK09291 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.18 Score=43.26 Aligned_cols=72 Identities=24% Similarity=0.361 Sum_probs=47.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCE-E--EeCCCC-Chhhhc-cCccEEEeC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADK-V--IDYRKT-KYEDIE-EKFDVLYDT 219 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~-v--~~~~~~-~~~~~~-~~~d~v~d~ 219 (327)
++++||+|++|.+|..+++.+... |.+++++.+++++...+. ..+... + .|..+. ...... .++|++|.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 468999999999999999888887 999998888766544432 223221 1 122221 122222 379999998
Q ss_pred CC
Q 020320 220 IG 221 (327)
Q Consensus 220 ~g 221 (327)
.|
T Consensus 81 ag 82 (257)
T PRK09291 81 AG 82 (257)
T ss_pred CC
Confidence 87
No 213
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.83 E-value=0.07 Score=45.31 Aligned_cols=69 Identities=20% Similarity=0.324 Sum_probs=50.8
Q ss_pred EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc--cHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~--~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g 221 (327)
|+|+||+|.+|..+++.+... +.++.+.++++. ....++..|++.+. |..+ +.+...++++|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~-~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA-GFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhC-CCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecC
Confidence 789999999999999998886 899999998764 34455678886542 2221 223345689999998887
No 214
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.82 E-value=0.3 Score=42.67 Aligned_cols=95 Identities=20% Similarity=0.212 Sum_probs=65.2
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..++ -.|++|+|.|.+..+|.-.+.++... |+.+.+.-.. ..+..
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~-gAtVtv~hs~-------------------t~~l~ 195 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNA-GASVSVCHIL-------------------TKDLS 195 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCEEEEEeCC-------------------cHHHH
Confidence 446665555555665554 36999999997779999999999877 8776544221 11223
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|... -.-..++++..++.+|...
T Consensus 196 ~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 196 FYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINR 232 (285)
T ss_pred HHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeeccc
Confidence 34567899999999653 2335678999999998654
No 215
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=94.81 E-value=0.23 Score=42.40 Aligned_cols=73 Identities=23% Similarity=0.311 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc--HHHHHHcCCCE-EE--eCCCC-Chhh-------hccCcc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK--VEFVKELGADK-VI--DYRKT-KYED-------IEEKFD 214 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~--~~~~~~~g~~~-v~--~~~~~-~~~~-------~~~~~d 214 (327)
.+++++|+|++|.+|.+++..+... |.+++++.+++.. .+.+++++... .+ |-.+. .... ...++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999988888877 8988888775421 22333444322 12 21111 1111 114689
Q ss_pred EEEeCCC
Q 020320 215 VLYDTIG 221 (327)
Q Consensus 215 ~v~d~~g 221 (327)
.++.+.|
T Consensus 83 ~li~~ag 89 (248)
T TIGR01832 83 ILVNNAG 89 (248)
T ss_pred EEEECCC
Confidence 9999886
No 216
>PRK06500 short chain dehydrogenase; Provisional
Probab=94.81 E-value=0.18 Score=43.04 Aligned_cols=73 Identities=22% Similarity=0.337 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhh----------hccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYED----------IEEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~----------~~~~~d~ 215 (327)
++++++|+||+|.+|.+.++.+... |++++++.+++++...+ ++++.... +..+-.+..+ ...++|.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999998888877 89888887776554333 44554321 2111111111 1246899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.+.|
T Consensus 84 vi~~ag 89 (249)
T PRK06500 84 VFINAG 89 (249)
T ss_pred EEECCC
Confidence 999887
No 217
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.80 E-value=0.12 Score=45.36 Aligned_cols=90 Identities=20% Similarity=0.326 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCc-
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC- 223 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~- 223 (327)
..+++++|+| +|++|.+++..++.. | .+++++.++.++.+.+ ++++....+.. ..+.......+|++++++...
T Consensus 121 ~~~k~vlVlG-aGg~a~ai~~aL~~~-g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~g~ 197 (278)
T PRK00258 121 LKGKRILILG-AGGAARAVILPLLDL-GVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSAGM 197 (278)
T ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcCCC
Confidence 4567899999 799999999999888 7 5677777887765444 44442210111 112223446799999997632
Q ss_pred -------hhhhhhhcCCCcEEEe
Q 020320 224 -------KNSFVVAKDNAPIVDI 239 (327)
Q Consensus 224 -------~~~~~~l~~~g~~v~~ 239 (327)
......+.+...++++
T Consensus 198 ~~~~~~~~~~~~~l~~~~~v~Di 220 (278)
T PRK00258 198 SGELPLPPLPLSLLRPGTIVYDM 220 (278)
T ss_pred CCCCCCCCCCHHHcCCCCEEEEe
Confidence 1122445555555555
No 218
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.2 Score=44.74 Aligned_cols=40 Identities=20% Similarity=0.349 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.+++++|+||++++|.+++..+... |++++++.+++++.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~ 52 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGE 52 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence 4689999999999999988877777 899998888876544
No 219
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=94.79 E-value=0.88 Score=38.57 Aligned_cols=96 Identities=21% Similarity=0.255 Sum_probs=58.8
Q ss_pred HHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCc---EEEEeCC----ccc--------HHHHHHcCCCEEEeCC
Q 020320 139 EGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS---HVVATTS----TPK--------VEFVKELGADKVIDYR 202 (327)
Q Consensus 139 ~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~---~v~~~~~----~~~--------~~~~~~~g~~~v~~~~ 202 (327)
.+++..+ --.+.+++|+| +|..|.+++..+... |.+ ++++.++ .++ .+++++++... .+
T Consensus 14 ~al~~~g~~l~~~rvlvlG-AGgAg~aiA~~L~~~-G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-- 88 (226)
T cd05311 14 NALKLVGKKIEEVKIVING-AGAAGIAIARLLLAA-GAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-- 88 (226)
T ss_pred HHHHHhCCCccCCEEEEEC-chHHHHHHHHHHHHc-CcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc--
Confidence 3444433 34568999999 799999998888877 765 6666666 343 33444443221 11
Q ss_pred CCChhhhccCccEEEeCCC-Cc--hhhhhhhcCCCcEEEee
Q 020320 203 KTKYEDIEEKFDVLYDTIG-DC--KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 203 ~~~~~~~~~~~d~v~d~~g-~~--~~~~~~l~~~g~~v~~g 240 (327)
.++.+.+.++|+++++++ +. ...++.++++..++.+.
T Consensus 89 -~~l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 -GTLKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -CCHHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 234455567999999986 22 34556666665555443
No 220
>PRK07478 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.22 Score=42.78 Aligned_cols=42 Identities=24% Similarity=0.437 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+++++|+|++|++|.+.+..+... |.+++++.+++++.+.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~ 46 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQL 46 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4679999999999999988887777 89998888877665443
No 221
>PRK08017 oxidoreductase; Provisional
Probab=94.77 E-value=0.078 Score=45.55 Aligned_cols=71 Identities=20% Similarity=0.317 Sum_probs=50.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCC-hhh---hc-----cCccEEEeC
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTK-YED---IE-----EKFDVLYDT 219 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~-~~~---~~-----~~~d~v~d~ 219 (327)
++++|+|++|.+|.++++.+... |.+++++.+++++.+.+++.+.+.+. |..+.. ..+ .. ..+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999999999999998887 88988888888887777777755433 222211 111 11 356888877
Q ss_pred CC
Q 020320 220 IG 221 (327)
Q Consensus 220 ~g 221 (327)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 66
No 222
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.75 E-value=0.086 Score=48.79 Aligned_cols=73 Identities=22% Similarity=0.375 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCC-EEE--eCCC-CChhhhccCccEEEeCCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGAD-KVI--DYRK-TKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~-~v~--~~~~-~~~~~~~~~~d~v~d~~g 221 (327)
.+++++|+||+|++|.+.+..+... |.+++++.+++++.... ...+.. ..+ |-.+ +...+..+++|+++.+.|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG 254 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG 254 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence 4789999999999999988877766 89998888776554322 111111 122 2222 122233468999998876
No 223
>PRK12828 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.2 Score=42.36 Aligned_cols=39 Identities=23% Similarity=0.393 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~ 187 (327)
+++++||+|++|.+|..+++.+... |.+++.+.+++++.
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~ 44 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPL 44 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhH
Confidence 4789999999999999988888777 89988888876653
No 224
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.73 E-value=0.21 Score=43.22 Aligned_cols=36 Identities=31% Similarity=0.321 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320 148 TGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTST 184 (327)
Q Consensus 148 ~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~ 184 (327)
.++.++|+||++ ++|.++++.+... |+++++..+++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~-G~~v~~~~r~~ 44 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKH-GAELWFTYQSE 44 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHc-CCEEEEEeCch
Confidence 578899999886 8999988777666 89888777663
No 225
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.70 E-value=0.14 Score=48.47 Aligned_cols=75 Identities=20% Similarity=0.396 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc---------------------ccHHHHHHcCCCEEEeCCCC-
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST---------------------PKVEFVKELGADKVIDYRKT- 204 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~- 204 (327)
..+++|+|+| +|+.|+.++..++.. |.++++....+ ...++++++|.+..++..-.
T Consensus 139 ~~~~~V~IIG-~GpaGl~aA~~l~~~-G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 216 (467)
T TIGR01318 139 PTGKRVAVIG-AGPAGLACADILARA-GVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR 216 (467)
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC
Confidence 3678999999 899999999999988 88887776543 13466678887765543211
Q ss_pred --ChhhhccCccEEEeCCCCc
Q 020320 205 --KYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 205 --~~~~~~~~~d~v~d~~g~~ 223 (327)
.......++|.+|.++|..
T Consensus 217 ~~~~~~~~~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DISLDDLLEDYDAVFLGVGTY 237 (467)
T ss_pred ccCHHHHHhcCCEEEEEeCCC
Confidence 1222224799999999853
No 226
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.67 E-value=0.023 Score=53.51 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=58.1
Q ss_pred hcCCCCCCEEE----EEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCC-EEEeCCCCChhhhccCccEEE
Q 020320 143 TAGFKTGQTIF----IVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGAD-KVIDYRKTKYEDIEEKFDVLY 217 (327)
Q Consensus 143 ~~~~~~~~~vl----I~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~d~v~ 217 (327)
..++++|+++| |+||+|++|.+++++++.. |++++.+...+.+.......+.+ .+++.....+...+....
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~--- 103 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGL-GYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALY--- 103 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhC-CCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHH---
Confidence 46778999998 9999999999999999998 99998876555433222222322 233322222111110000
Q ss_pred eCCCCchhhhhhhcCCCcEEEeeCCC
Q 020320 218 DTIGDCKNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 218 d~~g~~~~~~~~l~~~g~~v~~g~~~ 243 (327)
......++.|.++|+++.++...
T Consensus 104 ---~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 104 ---EFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred ---HHHHHHHHhccCCCEEEEEcccc
Confidence 01144567788999999887543
No 227
>PRK09072 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.24 Score=42.82 Aligned_cols=42 Identities=19% Similarity=0.434 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+.+++|+||+|.+|...+..+... |.+++++.+++++.+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 45 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEAL 45 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 4678999999999999988888777 89999888887665444
No 228
>PRK07904 short chain dehydrogenase; Provisional
Probab=94.64 E-value=0.27 Score=42.33 Aligned_cols=41 Identities=22% Similarity=0.257 Sum_probs=32.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK 186 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~ 186 (327)
+..+++++|+||+|++|.+.++-+...+|.+++++.+++++
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~ 45 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP 45 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch
Confidence 34678999999999999998876655535888888887664
No 229
>PRK07326 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.24 Score=41.89 Aligned_cols=42 Identities=19% Similarity=0.348 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+.+++|+||+|.+|..+++.+... |.+++++.+++++...+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~ 46 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEA 46 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHH
Confidence 4688999999999999998888777 89988888877655433
No 230
>PRK08628 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.26 Score=42.42 Aligned_cols=73 Identities=25% Similarity=0.370 Sum_probs=47.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH---cCCCE-EEeCCCCChhh---h-------ccCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE---LGADK-VIDYRKTKYED---I-------EEKF 213 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~---~-------~~~~ 213 (327)
.++++||+||+|.+|..++..+... |++++++.+++++.+..++ .+... .+..+-.+... . ..++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999988777777 8998888877766544443 23221 12111111111 1 1368
Q ss_pred cEEEeCCC
Q 020320 214 DVLYDTIG 221 (327)
Q Consensus 214 d~v~d~~g 221 (327)
|.++.+.|
T Consensus 85 d~vi~~ag 92 (258)
T PRK08628 85 DGLVNNAG 92 (258)
T ss_pred CEEEECCc
Confidence 99999987
No 231
>PRK06194 hypothetical protein; Provisional
Probab=94.61 E-value=0.23 Score=43.55 Aligned_cols=73 Identities=21% Similarity=0.388 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc---CCCE-EEeCCCCChhh---hc-------cC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL---GADK-VIDYRKTKYED---IE-------EK 212 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~---g~~~-v~~~~~~~~~~---~~-------~~ 212 (327)
.++++||+||+|.+|...+..+... |.+++++.++.++.+.. +++ +... ++..+-.+..+ .. .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3678999999999999988888777 89988888776554333 222 3322 12222222211 11 35
Q ss_pred ccEEEeCCC
Q 020320 213 FDVLYDTIG 221 (327)
Q Consensus 213 ~d~v~d~~g 221 (327)
+|+++.++|
T Consensus 84 id~vi~~Ag 92 (287)
T PRK06194 84 VHLLFNNAG 92 (287)
T ss_pred CCEEEECCC
Confidence 899999987
No 232
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.60 E-value=0.15 Score=43.86 Aligned_cols=73 Identities=18% Similarity=0.219 Sum_probs=45.8
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCE--EEeCCCCChh---h-------hccCc
Q 020320 148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADK--VIDYRKTKYE---D-------IEEKF 213 (327)
Q Consensus 148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~---~-------~~~~~ 213 (327)
.+++++|+||+ +++|.++++.+... |.++++..++++..+.++++.... .+.-+-.+.. . ...++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQ-GATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999988 79999988887777 999888877643333344442211 1211111111 1 11468
Q ss_pred cEEEeCCC
Q 020320 214 DVLYDTIG 221 (327)
Q Consensus 214 d~v~d~~g 221 (327)
|++++++|
T Consensus 85 D~lv~nAg 92 (252)
T PRK06079 85 DGIVHAIA 92 (252)
T ss_pred CEEEEccc
Confidence 99998876
No 233
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.59 E-value=0.18 Score=45.14 Aligned_cols=73 Identities=16% Similarity=0.288 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc----C----CCEEE-eCC-CCChhhhccCccEEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL----G----ADKVI-DYR-KTKYEDIEEKFDVLY 217 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~----g----~~~v~-~~~-~~~~~~~~~~~d~v~ 217 (327)
.|++|+|+||+|-+|..++..+... |.+++++.++..+.+...++ + ...+. |-. ...+.....++|.+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 4789999999999999988877777 88888788766543332221 1 11111 111 122334456799999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
.+++
T Consensus 83 h~A~ 86 (322)
T PLN02986 83 HTAS 86 (322)
T ss_pred EeCC
Confidence 8876
No 234
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.56 E-value=0.23 Score=39.49 Aligned_cols=73 Identities=23% Similarity=0.357 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHHHHcCCCEEEeCCC----CChhhh-------ccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFVKELGADKVIDYRK----TKYEDI-------EEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~~~~g~~~v~~~~~----~~~~~~-------~~~~d~ 215 (327)
+|-.-+|+|+++++|.++++.+... |+.++..+. +..-.+.++++|...++...+ .+.... ..+.|+
T Consensus 8 kglvalvtggasglg~ataerlakq-gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 4566799999999999998888877 999998885 444567789999876664332 222111 146899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
.++|.|
T Consensus 87 ~vncag 92 (260)
T KOG1199|consen 87 LVNCAG 92 (260)
T ss_pred eeeccc
Confidence 999998
No 235
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.50 E-value=0.27 Score=42.18 Aligned_cols=43 Identities=23% Similarity=0.377 Sum_probs=35.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
-.+++++|+||+|.+|.+++..+... |.+++++.+++++.+.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 45 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEV 45 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 35789999999999999988888877 89998888876654333
No 236
>PRK08589 short chain dehydrogenase; Validated
Probab=94.50 E-value=0.23 Score=43.22 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~ 184 (327)
.++++||+|+++++|.+++..+... |.+++++.+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~~ 40 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIAE 40 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcH
Confidence 5789999999999999988877777 99999888873
No 237
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.25 Score=43.16 Aligned_cols=40 Identities=28% Similarity=0.413 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.+++++|+|++|++|.+.+..+... |.+++++.+++++.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~ 44 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLR 44 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence 4789999999999999988888877 999888887766544
No 238
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.43 E-value=0.5 Score=41.35 Aligned_cols=95 Identities=15% Similarity=0.246 Sum_probs=66.0
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..++ -.|++++|+|.+..+|.-.+.++... ++++.+.-. +..+..
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVt~~hs-------------------~t~~l~ 196 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQA-GATVTICHS-------------------KTRDLA 196 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEecC-------------------CCCCHH
Confidence 345554445555555553 47999999998888899999999887 877665321 223344
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus 197 ~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 197 AHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNR 233 (285)
T ss_pred HHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccc
Confidence 45667899999999652 2237789999999998654
No 239
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.42 E-value=0.28 Score=42.42 Aligned_cols=73 Identities=19% Similarity=0.275 Sum_probs=44.2
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCChhh---h-------cc
Q 020320 148 TGQTIFIVGG--AGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKYED---I-------EE 211 (327)
Q Consensus 148 ~~~~vlI~ga--~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~---~-------~~ 211 (327)
.+++++|+|| ++++|.+.+..+... |+++++..+++...+.+++ .+....+..+-.+..+ . ..
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQ-GAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5789999996 569999988777777 9988876554332233322 3322222211122111 1 14
Q ss_pred CccEEEeCCC
Q 020320 212 KFDVLYDTIG 221 (327)
Q Consensus 212 ~~d~v~d~~g 221 (327)
++|++++++|
T Consensus 84 ~iD~lVnnAG 93 (261)
T PRK08690 84 GLDGLVHSIG 93 (261)
T ss_pred CCcEEEECCc
Confidence 6899999886
No 240
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.42 E-value=0.53 Score=41.17 Aligned_cols=95 Identities=16% Similarity=0.112 Sum_probs=66.8
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..+. -.|++++|+|.+..+|.-.+.+++.. ++.+.+.-+. ..+..
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~-~atVtv~hs~-------------------T~~l~ 197 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLA-GCTVTVCHRF-------------------TKNLR 197 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCeEEEEECC-------------------CCCHH
Confidence 346665556666666554 36999999998777999999999887 7766544322 12344
Q ss_pred hhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++.++|.... .-..++++..++.+|...
T Consensus 198 ~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin~ 234 (285)
T PRK10792 198 HHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINR 234 (285)
T ss_pred HHHhhCCEEEEcCCCcccccHHHcCCCcEEEEccccc
Confidence 455678999999996633 336778888888988654
No 241
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.40 E-value=0.14 Score=44.65 Aligned_cols=43 Identities=26% Similarity=0.473 Sum_probs=36.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
-.|+.++|+|++.++|.+.+..+... |++++++.+++++.+..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~ 48 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEET 48 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 46789999999999998887777767 99999999988875444
No 242
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.40 E-value=0.23 Score=44.48 Aligned_cols=137 Identities=21% Similarity=0.206 Sum_probs=90.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|+++.|+| .|.||++.+..++.. |.+++...+++. .+..++.++.++ ++.+.+...|++.-.....
T Consensus 145 ~gktvGIiG-~GrIG~avA~r~~~F-gm~v~y~~~~~~-~~~~~~~~~~y~------~l~ell~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 145 RGKTLGIIG-LGRIGQAVARRLKGF-GMKVLYYDRSPN-PEAEKELGARYV------DLDELLAESDIISLHCPLTPETR 215 (324)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhcC-CCEEEEECCCCC-hHHHhhcCceec------cHHHHHHhCCEEEEeCCCChHHh
Confidence 489999999 999999999999966 999999998766 444444555443 1455667889998666521
Q ss_pred ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCceeeeCCCcccchhhH--HHHHHHHHhC
Q 020320 224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLKAQIDPTGPYKFKDV--IEAFRYLETG 297 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~i--~~a~~~~~~~ 297 (327)
...+..|++++.++..+--... +-+.+++.+++|++.--- ..+|..+-. +..|..+.
T Consensus 216 hLin~~~l~~mk~ga~lVNtaRG~~V-------------De~ALi~AL~~g~i~gag--lDV~e~Ep~~~d~~l~~l~-- 278 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTARGGLV-------------DEQALIDALKSGKIAGAG--LDVFENEPALFDHPLLRLD-- 278 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCCcccc-------------CHHHHHHHHHhCCcceEE--eeecCCCCCCCChhHhhcc--
Confidence 4567889999998888643311 234678888888886321 233333222 34444332
Q ss_pred CCCceEEEEeCCCC
Q 020320 298 RARGKVVISAFPYT 311 (327)
Q Consensus 298 ~~~gk~vv~~~~~~ 311 (327)
+..++++.++-..
T Consensus 279 -~~~~vvltPHia~ 291 (324)
T COG1052 279 -NFPNVVLTPHIAS 291 (324)
T ss_pred -CCCCEEEcccccc
Confidence 2256777776444
No 243
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.38 E-value=0.29 Score=42.70 Aligned_cols=75 Identities=23% Similarity=0.242 Sum_probs=45.7
Q ss_pred CCCCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCCcc---cHH-HHHHcCCCEEEeCCCCChhh----------h
Q 020320 146 FKTGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTSTP---KVE-FVKELGADKVIDYRKTKYED----------I 209 (327)
Q Consensus 146 ~~~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~~~---~~~-~~~~~g~~~v~~~~~~~~~~----------~ 209 (327)
.-.+++++|+||+ +++|.+++..+... |+++++..+++. +.+ +.++++....+..+-.+..+ .
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 3457899999986 79999988877777 998887666532 222 22344532222222222111 1
Q ss_pred ccCccEEEeCCC
Q 020320 210 EEKFDVLYDTIG 221 (327)
Q Consensus 210 ~~~~d~v~d~~g 221 (327)
..++|++++++|
T Consensus 86 ~g~iD~lv~nAG 97 (272)
T PRK08159 86 WGKLDFVVHAIG 97 (272)
T ss_pred cCCCcEEEECCc
Confidence 146899998876
No 244
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.37 E-value=0.54 Score=41.14 Aligned_cols=95 Identities=19% Similarity=0.201 Sum_probs=65.9
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..++ -.|++++|+|.+..+|.-.+.++... ++.+.+.-. +..+..
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVtv~hs-------------------~T~~l~ 202 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNR-NATVSVCHV-------------------FTDDLK 202 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCEEEEEec-------------------cCCCHH
Confidence 446665555556666554 47999999998888999999999887 776544332 112334
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++.++|.+. -.-..++++..++.+|...
T Consensus 203 ~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin~ 239 (287)
T PRK14176 203 KYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITK 239 (287)
T ss_pred HHHhhCCEEEEccCCccccCHHHcCCCcEEEEecccc
Confidence 44567899999999663 2345788888888998643
No 245
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.32 E-value=0.15 Score=44.97 Aligned_cols=64 Identities=20% Similarity=0.262 Sum_probs=54.0
Q ss_pred HHHHH----HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe---CCcccHHHHHHcCCCEEEeC
Q 020320 137 AIEGF----KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT---TSTPKVEFVKELGADKVIDY 201 (327)
Q Consensus 137 a~~~l----~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~---~~~~~~~~~~~~g~~~v~~~ 201 (327)
||.++ ..+.+.||.++||-.-+|..|.+.+.++... |++.+++. .+.+|...++.+|++.|...
T Consensus 87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~-Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp 157 (362)
T KOG1252|consen 87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALR-GYKCIITMPEKMSKEKRILLRALGAEIILTP 157 (362)
T ss_pred HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHc-CceEEEEechhhhHHHHHHHHHcCCEEEecC
Confidence 55554 3477999999999999999999999999998 99999887 47889999999999877643
No 246
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.31 Score=41.53 Aligned_cols=73 Identities=16% Similarity=0.236 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-H---HcCCCE-EEeCCCCChhh---h-------ccC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-K---ELGADK-VIDYRKTKYED---I-------EEK 212 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~---~~g~~~-v~~~~~~~~~~---~-------~~~ 212 (327)
.+++++|+|++|.+|...+..+... |.+++++.+++++.+.. + +.+... ++..+-.+... . ..+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999998888877 89888887776654433 2 223222 12111111111 1 146
Q ss_pred ccEEEeCCC
Q 020320 213 FDVLYDTIG 221 (327)
Q Consensus 213 ~d~v~d~~g 221 (327)
+|.++.++|
T Consensus 85 id~vi~~ag 93 (250)
T PRK12939 85 LDGLVNNAG 93 (250)
T ss_pred CCEEEECCC
Confidence 899999987
No 247
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.30 E-value=0.36 Score=41.42 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~ 185 (327)
.+++++|+|+++++|.++++.+... |+++++..++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~ 43 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTD 43 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 4689999999999999998888877 899988887543
No 248
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=94.29 E-value=0.059 Score=47.22 Aligned_cols=66 Identities=24% Similarity=0.259 Sum_probs=45.0
Q ss_pred EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
|||+||+|-+|...+..+... |.+++++++++++.......+ +.+...........++|.|+.+++
T Consensus 1 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~Vvh~a~ 66 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD-GHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEGADAVINLAG 66 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc-CCEEEEEeCCCCCCCccccee---eecccccchhhhcCCCCEEEECCC
Confidence 689999999999999888877 899999888766543221111 111111223344568999999886
No 249
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.36 Score=40.90 Aligned_cols=41 Identities=12% Similarity=0.208 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
.+++++|+|+++++|.+.+..+... |.+++++.+++++.+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~ 44 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKD 44 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHH
Confidence 4689999999999999987777777 9998888887776543
No 250
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.25 E-value=0.22 Score=42.77 Aligned_cols=74 Identities=16% Similarity=0.208 Sum_probs=48.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc--CCCEE-EeCCC--CChhhhc-cCccEEEeCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL--GADKV-IDYRK--TKYEDIE-EKFDVLYDTI 220 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~--g~~~v-~~~~~--~~~~~~~-~~~d~v~d~~ 220 (327)
..+++++|+||+|.+|..++..+... |.++++..+++++....... ++..+ .|..+ ..+.+.+ .++|++|.+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAK-GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 34679999999999999998887776 88888888876654322111 22222 13222 2233444 5899999887
Q ss_pred C
Q 020320 221 G 221 (327)
Q Consensus 221 g 221 (327)
|
T Consensus 94 g 94 (251)
T PLN00141 94 G 94 (251)
T ss_pred C
Confidence 6
No 251
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.24 E-value=0.32 Score=41.88 Aligned_cols=70 Identities=19% Similarity=0.265 Sum_probs=45.2
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HH---cCCCEEEeCCCCChh---h-------hccCccEE
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KE---LGADKVIDYRKTKYE---D-------IEEKFDVL 216 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~---~g~~~v~~~~~~~~~---~-------~~~~~d~v 216 (327)
+++|+|+++++|.+.++.+... |++++++.+++++.+.+ ++ .+.-+.+..+-.+.. . ...++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899999999999988887777 89988888877654333 22 232122222211111 1 12468999
Q ss_pred EeCCC
Q 020320 217 YDTIG 221 (327)
Q Consensus 217 ~d~~g 221 (327)
+++.|
T Consensus 81 i~naG 85 (259)
T PRK08340 81 VWNAG 85 (259)
T ss_pred EECCC
Confidence 99877
No 252
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.23 E-value=0.31 Score=41.94 Aligned_cols=42 Identities=24% Similarity=0.453 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.++++||+|++|.+|...++.+... |.+++++.++.++.+..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 52 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEA 52 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 5689999999999999988888877 99998888877665443
No 253
>PLN02928 oxidoreductase family protein
Probab=94.22 E-value=0.24 Score=44.92 Aligned_cols=110 Identities=20% Similarity=0.256 Sum_probs=71.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC----C-CEEEe--CCCCChhhhccCccEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG----A-DKVID--YRKTKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g----~-~~v~~--~~~~~~~~~~~~~d~v~d~~ 220 (327)
.|+++.|+| .|.+|..+++.++.+ |.++++..++..+... ..++ . ....+ ....++.+.+...|+++.++
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~af-G~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPF-GVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhC-CCEEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 578999999 999999999999998 9999888765332111 1110 0 00000 11234555667899999887
Q ss_pred CCc--------hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 221 GDC--------KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 221 g~~--------~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
... ...+..|+++..++.++-... ++ -+.+++.+.+|++.
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~l----------Vd---e~AL~~AL~~g~i~ 282 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGL----------LD---YDAVLAALESGHLG 282 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCee
Confidence 621 456788899988888763221 11 23567777888875
No 254
>PRK05717 oxidoreductase; Validated
Probab=94.21 E-value=0.35 Score=41.51 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH-HHHcCCCEE-EeCCCCChhh------h----ccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF-VKELGADKV-IDYRKTKYED------I----EEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~-~~~~g~~~v-~~~~~~~~~~------~----~~~~d~ 215 (327)
.|++++|+|++|.+|..++..+... |.+++++.+++++... .++++.... +..+-.+..+ . ..++|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999999999999988888777 8888888776554433 344543221 1111111111 1 135899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.+.|
T Consensus 88 li~~ag 93 (255)
T PRK05717 88 LVCNAA 93 (255)
T ss_pred EEECCC
Confidence 999887
No 255
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.21 E-value=0.28 Score=42.17 Aligned_cols=73 Identities=23% Similarity=0.293 Sum_probs=46.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc--HHHHHHcCCCEE-E--eCCCC-Chhhh-------ccCcc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK--VEFVKELGADKV-I--DYRKT-KYEDI-------EEKFD 214 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~--~~~~~~~g~~~v-~--~~~~~-~~~~~-------~~~~d 214 (327)
.+++++|+|+++++|.++++.+... |++++++.+++.. .+..++.+.... + |-.+. ..... ..++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999998888777 9988877654321 223344443321 2 22221 11111 14689
Q ss_pred EEEeCCC
Q 020320 215 VLYDTIG 221 (327)
Q Consensus 215 ~v~d~~g 221 (327)
+++++.|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9999887
No 256
>PRK06483 dihydromonapterin reductase; Provisional
Probab=94.21 E-value=0.4 Score=40.58 Aligned_cols=72 Identities=13% Similarity=0.203 Sum_probs=46.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc-HHHHHHcCCCEE-EeCCC-CChhh-------hccCccEEEe
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK-VEFVKELGADKV-IDYRK-TKYED-------IEEKFDVLYD 218 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~-~~~~~~~g~~~v-~~~~~-~~~~~-------~~~~~d~v~d 218 (327)
++++||+|+++++|.++++.+... |.+++++.+++++ .+.+++.+...+ .|-.+ +.... ...++|.++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 468999999999999998888777 9999988876543 233344553322 12111 11111 1135899998
Q ss_pred CCC
Q 020320 219 TIG 221 (327)
Q Consensus 219 ~~g 221 (327)
+.|
T Consensus 81 ~ag 83 (236)
T PRK06483 81 NAS 83 (236)
T ss_pred CCc
Confidence 877
No 257
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.18 E-value=0.34 Score=41.68 Aligned_cols=40 Identities=23% Similarity=0.369 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.++++||+|++|.+|..++..+... |.+++++.+++++..
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~ 45 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGAN 45 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHH
Confidence 4689999999999999988888877 899888888776543
No 258
>PRK08264 short chain dehydrogenase; Validated
Probab=94.14 E-value=0.31 Score=41.26 Aligned_cols=71 Identities=18% Similarity=0.306 Sum_probs=46.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHHcCCC-EEE--eCCC-CChhhh---ccCccEEEeC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKELGAD-KVI--DYRK-TKYEDI---EEKFDVLYDT 219 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~~g~~-~v~--~~~~-~~~~~~---~~~~d~v~d~ 219 (327)
.+.+++|+||+|.+|..++..+... |. +++++.+++++.+. .+.. ..+ |-.+ ...... ...+|+++.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 4678999999999999998888877 87 88778777665432 3222 122 2211 111111 2358999988
Q ss_pred CCC
Q 020320 220 IGD 222 (327)
Q Consensus 220 ~g~ 222 (327)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 874
No 259
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.14 E-value=0.27 Score=42.31 Aligned_cols=73 Identities=26% Similarity=0.362 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH---cCCCEE---EeCCCC-Chhhh-------ccCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE---LGADKV---IDYRKT-KYEDI-------EEKF 213 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~---~g~~~v---~~~~~~-~~~~~-------~~~~ 213 (327)
.+++++|+||+|.+|.++++.+... |.+++++.+++...+..++ .+.+.. .|-.+. ..... ..++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999988888777 8988888776543333333 233321 122221 11111 1468
Q ss_pred cEEEeCCC
Q 020320 214 DVLYDTIG 221 (327)
Q Consensus 214 d~v~d~~g 221 (327)
|+++.++|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999886
No 260
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.13 E-value=0.22 Score=49.30 Aligned_cols=75 Identities=19% Similarity=0.370 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc---------------------cHHHHHHcCCCEEEeCC---
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP---------------------KVEFVKELGADKVIDYR--- 202 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~---------------------~~~~~~~~g~~~v~~~~--- 202 (327)
..+++|+|+| +|+.|++++..++.+ |.++.+....+. +.+.++++|.+...+..
T Consensus 325 ~~~~~VaIIG-aGpAGLsaA~~L~~~-G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 402 (654)
T PRK12769 325 KSDKRVAIIG-AGPAGLACADVLARN-GVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGK 402 (654)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCC
Confidence 3588999999 899999999999988 988888775432 24455677765443321
Q ss_pred CCChhhhccCccEEEeCCCCc
Q 020320 203 KTKYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 203 ~~~~~~~~~~~d~v~d~~g~~ 223 (327)
+........++|.+|.++|..
T Consensus 403 ~i~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 403 DISLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred cCCHHHHHhcCCEEEEeCCCC
Confidence 112223335799999998853
No 261
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=94.13 E-value=0.11 Score=41.73 Aligned_cols=90 Identities=22% Similarity=0.279 Sum_probs=62.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCC-C--------------------CChh
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYR-K--------------------TKYE 207 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~-~--------------------~~~~ 207 (327)
..+|+|+| +|.+|+.|+.+++.+ |+++++.+..+++.+..+..+...+.... . ..+.
T Consensus 20 p~~vvv~G-~G~vg~gA~~~~~~l-Ga~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 20 PAKVVVTG-AGRVGQGAAEIAKGL-GAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CeEEEEEC-CCHHHHHHHHHHhHC-CCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 37889999 899999999999999 99999999998888888888765543311 0 0122
Q ss_pred hhccCccEEEeCC--CC---c----hhhhhhhcCCCcEEEee
Q 020320 208 DIEEKFDVLYDTI--GD---C----KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 208 ~~~~~~d~v~d~~--g~---~----~~~~~~l~~~g~~v~~g 240 (327)
+.+..+|+++-+. +. + ...++.|+++..++.+.
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis 139 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS 139 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence 2234689988542 21 1 56778888888888774
No 262
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.07 E-value=0.44 Score=40.48 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=34.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
..+++++|+|++|.+|..++..+... |.+++++.+++++.+.
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~ 45 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEA 45 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 34678999999999999988888777 8888888887765433
No 263
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.04 E-value=0.41 Score=41.20 Aligned_cols=73 Identities=21% Similarity=0.357 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc----CCC-EEEeCCCCChhh------hccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL----GAD-KVIDYRKTKYED------IEEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~----g~~-~v~~~~~~~~~~------~~~~~d~ 215 (327)
.+++++|+|+++++|.+.++.+... |++++++.+++++.+.+ +++ +.. ..+..+-.+..+ ....+|.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 4789999999999999988888877 89888888876655433 222 222 122111111111 2256899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.+.|
T Consensus 85 lv~~ag 90 (259)
T PRK06125 85 LVNNAG 90 (259)
T ss_pred EEECCC
Confidence 999887
No 264
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=94.04 E-value=0.38 Score=42.85 Aligned_cols=86 Identities=17% Similarity=0.205 Sum_probs=56.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.+|.|+| +|.+|.+.+..++.. |. ++++..+++++.+.+++.|...... .+.......+|+++.|+...
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~-g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRL-GLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHhcCCCEEEECCCHHHHHH
Confidence 5799999 999999988888776 63 6777778888888888877532211 12233456789999888632
Q ss_pred --hhhhhhhcCCCcEEEee
Q 020320 224 --KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 224 --~~~~~~l~~~g~~v~~g 240 (327)
......++++..++.++
T Consensus 82 v~~~l~~~l~~~~iv~dvg 100 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVG 100 (307)
T ss_pred HHHHHHhhCCCCCEEEeCc
Confidence 12223445555555443
No 265
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.01 E-value=1.2 Score=34.71 Aligned_cols=94 Identities=17% Similarity=0.142 Sum_probs=63.0
Q ss_pred cchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320 130 LPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED 208 (327)
Q Consensus 130 ~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 208 (327)
+|+.....+..++..+ --.|++++|+|.+..+|.-++.++... |+.+........ +..+
T Consensus 8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~-gatV~~~~~~t~-------------------~l~~ 67 (140)
T cd05212 8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRD-GATVYSCDWKTI-------------------QLQS 67 (140)
T ss_pred cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeCCCCc-------------------CHHH
Confidence 3444433444455444 357999999999999999999988877 777665553221 2233
Q ss_pred hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
..+.+|+++-++|..+ -.-..+++|-.++.+|...
T Consensus 68 ~v~~ADIVvsAtg~~~~i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 68 KVHDADVVVVGSPKPEKVPTEWIKPGATVINCSPTK 103 (140)
T ss_pred HHhhCCEEEEecCCCCccCHHHcCCCCEEEEcCCCc
Confidence 4566888998888652 3346788888888777543
No 266
>PRK07774 short chain dehydrogenase; Provisional
Probab=94.00 E-value=0.37 Score=41.12 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~ 187 (327)
.+++++|+|++|.+|...+..+... |.+++++.++++..
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~ 43 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGA 43 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence 4678999999999999988888777 89999888876544
No 267
>PRK08643 acetoin reductase; Validated
Probab=93.97 E-value=0.4 Score=41.15 Aligned_cols=40 Identities=10% Similarity=0.202 Sum_probs=33.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
+++++|+|++|.+|...++.+... |.+++++.+++++.+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~ 41 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQA 41 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 578999999999999998888877 9998888887665433
No 268
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=93.97 E-value=0.34 Score=40.48 Aligned_cols=98 Identities=20% Similarity=0.208 Sum_probs=58.9
Q ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHH----HHcCCCEE--EeCCCCChhhhc
Q 020320 139 EGFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFV----KELGADKV--IDYRKTKYEDIE 210 (327)
Q Consensus 139 ~~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~----~~~g~~~v--~~~~~~~~~~~~ 210 (327)
..++...+++|++||-+| ++.|..++.+++.. |. +++.+...++-.+.+ +.++.+.| +..+...-....
T Consensus 63 ~~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lv-g~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~ 139 (209)
T PF01135_consen 63 RMLEALDLKPGDRVLEIG--TGSGYQAALLAHLV-GPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEE 139 (209)
T ss_dssp HHHHHTTC-TT-EEEEES---TTSHHHHHHHHHH-STTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG
T ss_pred HHHHHHhcCCCCEEEEec--CCCcHHHHHHHHhc-CccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccC
Confidence 355677899999999998 34566777777766 54 355556666544333 45665443 222211111123
Q ss_pred cCccEEEeCCC--C-chhhhhhhcCCCcEEEe
Q 020320 211 EKFDVLYDTIG--D-CKNSFVVAKDNAPIVDI 239 (327)
Q Consensus 211 ~~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~ 239 (327)
..+|.++-+.+ . +...+..|++||+++..
T Consensus 140 apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 140 APFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp -SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred CCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 46899997765 2 35677899999999885
No 269
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=93.96 E-value=0.39 Score=41.26 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=32.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~ 187 (327)
++++||+|++|.+|.+.+..+... |++++.+.++..+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~ 39 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKA 39 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHH
Confidence 468999999999999988888877 89998888776654
No 270
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.94 E-value=0.6 Score=41.01 Aligned_cols=51 Identities=29% Similarity=0.346 Sum_probs=43.2
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcC
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELG 194 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g 194 (327)
..+.++..+++|+|++.++|++.+..++.. |+.+-++.++..++..+. +++
T Consensus 27 ~~~~k~~~hi~itggS~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~ 78 (331)
T KOG1210|consen 27 IVKPKPRRHILITGGSSGLGLALALECKRE-GADVTITARSGKKLLEAKAELE 78 (331)
T ss_pred hcccCccceEEEecCcchhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhh
Confidence 355666789999999999999999999998 999999999999887663 444
No 271
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=93.94 E-value=0.38 Score=41.89 Aligned_cols=39 Identities=23% Similarity=0.372 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~ 187 (327)
.+++++|+|++|.+|.+.+..+... |.+++++.+++++.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~ 47 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKA 47 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence 4689999999999999998888877 89988888776544
No 272
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=93.93 E-value=0.21 Score=43.94 Aligned_cols=72 Identities=19% Similarity=0.208 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHH-HHHcCCCE-EEeCCC-CChhhhccCccEEEeCCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEF-VKELGADK-VIDYRK-TKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~-~~~~g~~~-v~~~~~-~~~~~~~~~~d~v~d~~g 221 (327)
.+++++|+| +|+.+.+++..+..+ |++ +.++.++.+|.+. +++++... +..... .+.......+|++++|+.
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~-G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp 199 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASL-GVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVP 199 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCC
Confidence 578999999 899999988888888 765 5555677766544 34444211 111111 112233467999999976
No 273
>PRK06914 short chain dehydrogenase; Provisional
Probab=93.92 E-value=0.4 Score=41.80 Aligned_cols=41 Identities=17% Similarity=0.215 Sum_probs=33.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
++++||+||+|.+|...+..+... |.+++++.+++++.+.+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 43 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENL 43 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence 578999999999999998888877 99998888877655433
No 274
>PRK06179 short chain dehydrogenase; Provisional
Probab=93.91 E-value=0.072 Score=46.26 Aligned_cols=71 Identities=14% Similarity=0.312 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCC-CChhhh-------ccCccEEEe
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRK-TKYEDI-------EEKFDVLYD 218 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~~-------~~~~d~v~d 218 (327)
.+++++|+||+|.+|..++..+... |.++++..+++++.... .+...+ .|-.+ ...... .+.+|+++.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999999999999988888777 99988888775543321 122222 12222 111111 136899999
Q ss_pred CCC
Q 020320 219 TIG 221 (327)
Q Consensus 219 ~~g 221 (327)
+.|
T Consensus 80 ~ag 82 (270)
T PRK06179 80 NAG 82 (270)
T ss_pred CCC
Confidence 987
No 275
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=93.91 E-value=0.17 Score=38.20 Aligned_cols=89 Identities=16% Similarity=0.192 Sum_probs=54.7
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-c-HHHHHHcC----C-CEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-K-VEFVKELG----A-DKVIDYRKTKYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~-~~~~~~~g----~-~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 223 (327)
+|.|+||+|.+|...+.++..+...+.+.+..+.. . ..+...++ . +..+.. .+ .....++|++|.|.+.-
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~~~~ 77 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLALPHG 77 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-SCHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecCchh
Confidence 58999999999999999998876777666664333 2 22222222 1 222221 11 22347899999999842
Q ss_pred ---hhhhhhhcCCCcEEEeeCC
Q 020320 224 ---KNSFVVAKDNAPIVDITWP 242 (327)
Q Consensus 224 ---~~~~~~l~~~g~~v~~g~~ 242 (327)
...-..++.+-+++..+..
T Consensus 78 ~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 78 ASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp HHHHHHHHHHHTTSEEEESSST
T ss_pred HHHHHHHHHhhCCcEEEeCCHH
Confidence 3334556777778777643
No 276
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=93.89 E-value=0.27 Score=44.00 Aligned_cols=73 Identities=16% Similarity=0.307 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH---c-CC--C-EEE--eCCC-CChhhhccCccEEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE---L-GA--D-KVI--DYRK-TKYEDIEEKFDVLY 217 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~---~-g~--~-~v~--~~~~-~~~~~~~~~~d~v~ 217 (327)
.++++||+||+|.+|..++..+... |.++++..++.++...... . +. . ..+ |-.+ ..+.....++|.++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 4789999999999999998888877 8888877766554322211 1 11 1 112 2222 22333456799999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
.++|
T Consensus 83 h~A~ 86 (325)
T PLN02989 83 HTAS 86 (325)
T ss_pred EeCC
Confidence 9887
No 277
>PRK06720 hypothetical protein; Provisional
Probab=93.89 E-value=0.53 Score=37.90 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~ 187 (327)
.++.++|.||++++|...+..+... |.++++..++++..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~-G~~V~l~~r~~~~~ 53 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQ-GAKVIVTDIDQESG 53 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEECCHHHH
Confidence 5789999999999999988877766 88888888766544
No 278
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=93.88 E-value=1.2 Score=37.20 Aligned_cols=99 Identities=23% Similarity=0.190 Sum_probs=61.0
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHH----cCCCEE--EeCCCCChhhhccC
Q 020320 140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKE----LGADKV--IDYRKTKYEDIEEK 212 (327)
Q Consensus 140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~~ 212 (327)
.+....++++++||-+| +| .|..+..+++..+ +.+++.+..+++..+.+++ .|.+.+ +..+..........
T Consensus 68 ~~~~l~~~~g~~VLdIG-~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~ 145 (212)
T PRK13942 68 MCELLDLKEGMKVLEIG-TG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAP 145 (212)
T ss_pred HHHHcCCCCcCEEEEEC-Cc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCC
Confidence 34567789999999998 33 4666677777652 2467778888876666543 454332 22221111112246
Q ss_pred ccEEEeCCC--Cc-hhhhhhhcCCCcEEEee
Q 020320 213 FDVLYDTIG--DC-KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 213 ~d~v~d~~g--~~-~~~~~~l~~~g~~v~~g 240 (327)
+|+++-... .. ......|+++|+++..-
T Consensus 146 fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 146 YDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred cCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence 899875433 22 56678899999987753
No 279
>PRK05875 short chain dehydrogenase; Provisional
Probab=93.84 E-value=0.37 Score=41.89 Aligned_cols=40 Identities=23% Similarity=0.364 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
++++++|+|++|.+|..+++.+... |.+++.+.+++++.+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~ 45 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLA 45 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHH
Confidence 4689999999999999999988877 898888887766543
No 280
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.84 E-value=0.74 Score=40.31 Aligned_cols=95 Identities=19% Similarity=0.234 Sum_probs=65.9
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..++ -.|++++|.|.+..+|.=.+.++... ++.+.+.- ++..+..
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~aTVtich-------------------s~T~~l~ 193 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLRE-DATVTLAH-------------------SKTQDLP 193 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEeC-------------------CCCCCHH
Confidence 346555445555566554 46999999999999999988888876 76554322 2222334
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 194 ~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 194 AVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINR 230 (287)
T ss_pred HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcc
Confidence 45567899999999663 3346778999999998755
No 281
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=93.84 E-value=0.051 Score=27.77 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=15.4
Q ss_pred ceeEEecccCCCcceEEeeccCCCC
Q 020320 2 QNAWYYEEYGPKEVLKLGDFPLPTP 26 (327)
Q Consensus 2 ~~~~v~~~~~~~~~l~~~~~~~p~~ 26 (327)
|||+++..+++ ++++++|.|.+
T Consensus 1 MkAv~y~G~~~---v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD---VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE---EEEEEE----S
T ss_pred CcceEEeCCCc---eEEEECCCccc
Confidence 89999999888 99999998875
No 282
>PRK07024 short chain dehydrogenase; Provisional
Probab=93.82 E-value=0.45 Score=40.96 Aligned_cols=41 Identities=20% Similarity=0.326 Sum_probs=33.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
+.+++|+|++|.+|...+..+... |.+++++.+++++.+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 42 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAF 42 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 468999999999999988888777 89988888877665443
No 283
>PRK08226 short chain dehydrogenase; Provisional
Probab=93.81 E-value=0.39 Score=41.41 Aligned_cols=42 Identities=24% Similarity=0.403 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+++++|+|++|.+|...+..+... |.+++++.++++..+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~~~~~~ 46 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARH-GANLILLDISPEIEKLA 46 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHH
Confidence 4689999999999999998888877 99888887766533333
No 284
>PRK06484 short chain dehydrogenase; Validated
Probab=93.81 E-value=0.31 Score=46.77 Aligned_cols=73 Identities=25% Similarity=0.396 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE---EeCCCC-Chhhh-------ccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV---IDYRKT-KYEDI-------EEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v---~~~~~~-~~~~~-------~~~~d~ 215 (327)
.+++++|+|+++++|.++++.+... |++++++.++.++.+.+ ++++.... .|-.+. ..... ..++|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999999999998888887 99999888877765444 45654321 222221 11111 146899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++++.|
T Consensus 83 li~nag 88 (520)
T PRK06484 83 LVNNAG 88 (520)
T ss_pred EEECCC
Confidence 998876
No 285
>PRK13243 glyoxylate reductase; Reviewed
Probab=93.80 E-value=0.37 Score=43.47 Aligned_cols=104 Identities=23% Similarity=0.251 Sum_probs=69.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|+++.|+| .|.+|...+..++.+ |.++++..++.... .....+... .++.+.+...|+++-++...
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~-~~~~~~~~~------~~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGF-GMRILYYSRTRKPE-AEKELGAEY------RPLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCChh-hHHHcCCEe------cCHHHHHhhCCEEEEeCCCChHHh
Confidence 578999999 999999999999988 99988887765432 233444321 23455567789999887521
Q ss_pred ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
...+..++++..++.++-.... +-+.+.+.+++|++.
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aRg~~v-------------d~~aL~~aL~~g~i~ 260 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTARGKVV-------------DTKALVKALKEGWIA 260 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcCchhc-------------CHHHHHHHHHcCCeE
Confidence 3456677788777776532211 124556666777664
No 286
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.78 E-value=0.46 Score=40.22 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
++++++|+|++|.+|...+..+... |.+++++.+++++.+.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~ 44 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEA 44 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHH
Confidence 4578999999999999998888877 8888888887766443
No 287
>PRK06198 short chain dehydrogenase; Provisional
Probab=93.78 E-value=0.38 Score=41.37 Aligned_cols=74 Identities=24% Similarity=0.438 Sum_probs=46.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHH----HHHHcCCCEE-E--eCCCCC-hhhh-------c
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVE----FVKELGADKV-I--DYRKTK-YEDI-------E 210 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~----~~~~~g~~~v-~--~~~~~~-~~~~-------~ 210 (327)
-.+++++|+|++|.+|..+++.+... |.+ ++++.+++++.. .+++.+.... + |..+.+ ..+. .
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAER-GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35688999999999999998888877 888 777767655443 2223343321 1 222211 1111 1
Q ss_pred cCccEEEeCCC
Q 020320 211 EKFDVLYDTIG 221 (327)
Q Consensus 211 ~~~d~v~d~~g 221 (327)
.++|.++.+.|
T Consensus 83 g~id~li~~ag 93 (260)
T PRK06198 83 GRLDALVNAAG 93 (260)
T ss_pred CCCCEEEECCC
Confidence 46899999987
No 288
>PLN02253 xanthoxin dehydrogenase
Probab=93.75 E-value=0.42 Score=41.66 Aligned_cols=73 Identities=19% Similarity=0.380 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-HHHHcCC--C-EEE--eCCCC-Chhhh-------ccCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-FVKELGA--D-KVI--DYRKT-KYEDI-------EEKF 213 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-~~~~~g~--~-~v~--~~~~~-~~~~~-------~~~~ 213 (327)
.+++++|+|++|.+|.+.+..+... |.++++..++++..+ ..++++. . ..+ |-.+. ..... ..++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999988877777 899888887655433 2333432 1 112 22221 11111 1368
Q ss_pred cEEEeCCC
Q 020320 214 DVLYDTIG 221 (327)
Q Consensus 214 d~v~d~~g 221 (327)
|.+++++|
T Consensus 96 d~li~~Ag 103 (280)
T PLN02253 96 DIMVNNAG 103 (280)
T ss_pred CEEEECCC
Confidence 99999886
No 289
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=93.73 E-value=0.39 Score=42.85 Aligned_cols=104 Identities=20% Similarity=0.232 Sum_probs=70.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|+++.|+| .|.+|...++.++.+ |.++++..++.++.. +.+... ...++.+.+...|+++.+....
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~af-G~~V~~~~~~~~~~~-----~~~~~~--~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTW-GFPLRCWSRSRKSWP-----GVQSFA--GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCCCCCC-----Cceeec--ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 578999999 999999999999987 999988876543321 222111 1234555667899999887632
Q ss_pred ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
...+..|+++..++.++-.... + -+.+++.+++|++.
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aRG~vV----------d---e~aL~~aL~~g~i~ 246 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLARGVHV----------V---EDDLLAALDSGKVK 246 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCCcccc----------C---HHHHHHHHhcCCee
Confidence 3456778888888777633211 1 23556777777765
No 290
>PRK06181 short chain dehydrogenase; Provisional
Probab=93.71 E-value=0.42 Score=41.16 Aligned_cols=39 Identities=23% Similarity=0.456 Sum_probs=32.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
+.++||+|++|.+|..+++.+... |.+++++.+++++.+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~ 39 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLA 39 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence 357999999999999999888877 888888888765543
No 291
>PRK07832 short chain dehydrogenase; Provisional
Probab=93.70 E-value=0.33 Score=42.17 Aligned_cols=38 Identities=18% Similarity=0.319 Sum_probs=31.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
++++|+||+|++|..+++.+... |++++++.+++++.+
T Consensus 1 k~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~ 38 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLA 38 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence 36899999999999998888877 888888777766543
No 292
>PRK08251 short chain dehydrogenase; Provisional
Probab=93.68 E-value=0.5 Score=40.29 Aligned_cols=41 Identities=22% Similarity=0.321 Sum_probs=33.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
+++++|+|++|++|...+..+... |.++++..+++++.+.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~-g~~v~~~~r~~~~~~~~ 42 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK-GRDLALCARRTDRLEEL 42 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 468999999999999887777767 88888888877665443
No 293
>PRK08618 ornithine cyclodeaminase; Validated
Probab=93.65 E-value=1.6 Score=39.20 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=61.2
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHH-HhhcCCcEEEEe-CCcccHHHH-HH----cCCCEEEeCCCCChhhhccCcc
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLA-KHFYGASHVVAT-TSTPKVEFV-KE----LGADKVIDYRKTKYEDIEEKFD 214 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la-~~~~g~~~v~~~-~~~~~~~~~-~~----~g~~~v~~~~~~~~~~~~~~~d 214 (327)
+.......++++|+| +|..|.+.+..+ ... +.+.+.+. +++++.+.+ ++ ++.+.... .+..+....+|
T Consensus 120 ~~la~~~~~~v~iiG-aG~~a~~~~~al~~~~-~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~---~~~~~~~~~aD 194 (325)
T PRK08618 120 KYLAREDAKTLCLIG-TGGQAKGQLEAVLAVR-DIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVV---NSADEAIEEAD 194 (325)
T ss_pred HHhcCCCCcEEEEEC-CcHHHHHHHHHHHhcC-CccEEEEECCCHHHHHHHHHHHHHhcCCcEEEe---CCHHHHHhcCC
Confidence 444445678899999 899997766544 444 66555554 676665433 33 34332221 23445567899
Q ss_pred EEEeCCCCc--hhhhhhhcCCCcEEEeeCCC
Q 020320 215 VLYDTIGDC--KNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 215 ~v~d~~g~~--~~~~~~l~~~g~~v~~g~~~ 243 (327)
+|+.++++. ... ..+++|-.+..+|...
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence 999998744 334 8889988888887643
No 294
>PRK07856 short chain dehydrogenase; Provisional
Probab=93.64 E-value=0.41 Score=41.00 Aligned_cols=38 Identities=29% Similarity=0.552 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK 186 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~ 186 (327)
.+++++|+||+|.+|.+.++.+... |.+++++.+++++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPE 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhh
Confidence 4789999999999999988888777 8988888876554
No 295
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=93.64 E-value=0.92 Score=37.21 Aligned_cols=111 Identities=17% Similarity=0.112 Sum_probs=70.7
Q ss_pred ccchHHHHHHHHHHhcCC----------CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcCCCE
Q 020320 129 SLPLAVQTAIEGFKTAGF----------KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELGADK 197 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~----------~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g~~~ 197 (327)
++|++....+..++..++ -.|++++|+|.+..+|.=.+.++... ++.+.+...+.-.. ....++ .+
T Consensus 32 ~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~-~AtVti~~~~~~~~~~~~~~~--~h 108 (197)
T cd01079 32 ILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLAND-GARVYSVDINGIQVFTRGESI--RH 108 (197)
T ss_pred ccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEEecCccccccccccc--cc
Confidence 445555555555655443 67999999999999999988888877 88887664322111 000000 00
Q ss_pred EEe---CCCCChhhhccCccEEEeCCCCchh--hhhhhcCCCcEEEeeCC
Q 020320 198 VID---YRKTKYEDIEEKFDVLYDTIGDCKN--SFVVAKDNAPIVDITWP 242 (327)
Q Consensus 198 v~~---~~~~~~~~~~~~~d~v~d~~g~~~~--~~~~l~~~g~~v~~g~~ 242 (327)
--. ..+.+..+..+.+|+++-++|..+. .-..+++|..++.+|..
T Consensus 109 s~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 109 EKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASI 158 (197)
T ss_pred ccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence 000 0001134456789999999997754 56788999999999865
No 296
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=93.63 E-value=0.55 Score=41.27 Aligned_cols=61 Identities=18% Similarity=0.294 Sum_probs=50.5
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe---CCcccHHHHHHcCCCEEEeCC
Q 020320 140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT---TSTPKVEFVKELGADKVIDYR 202 (327)
Q Consensus 140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~---~~~~~~~~~~~~g~~~v~~~~ 202 (327)
+...+.++||. .+|-+-+|..|.+.+.+|+.+ |.+.+++. .+.+|..+++.+|++.++...
T Consensus 53 Ae~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 53 AEKRGLLKPGG-TIVEATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHcCCCCCCC-EEEEcCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 34567799999 556666999999999999998 99998887 478899999999998877554
No 297
>PRK08339 short chain dehydrogenase; Provisional
Probab=93.61 E-value=0.16 Score=44.04 Aligned_cols=42 Identities=17% Similarity=0.323 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+++++|+|+++++|.++++.+... |++++++.+++++.+.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~ 48 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKA 48 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999998888887 99998888876655433
No 298
>PRK08317 hypothetical protein; Provisional
Probab=93.61 E-value=0.58 Score=39.52 Aligned_cols=98 Identities=18% Similarity=0.214 Sum_probs=62.5
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHc----CCCE-EEeCCCCChhhhccCcc
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKEL----GADK-VIDYRKTKYEDIEEKFD 214 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~----g~~~-v~~~~~~~~~~~~~~~d 214 (327)
++...+.++++||-.| ||. |..+..+++..+ ..+++.++.++...+.+++. +... +...+..........+|
T Consensus 12 ~~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 89 (241)
T PRK08317 12 FELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFD 89 (241)
T ss_pred HHHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCce
Confidence 4567888999999999 776 888888888762 35788888888877777654 1111 11111111111124688
Q ss_pred EEEeCC--C---C----chhhhhhhcCCCcEEEee
Q 020320 215 VLYDTI--G---D----CKNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 215 ~v~d~~--g---~----~~~~~~~l~~~g~~v~~g 240 (327)
+++... . . .....++|+++|.++...
T Consensus 90 ~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 90 AVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred EEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 877432 1 1 155678899999998765
No 299
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=93.59 E-value=0.56 Score=40.33 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS 183 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~ 183 (327)
.++++||+||++.+|.+.++.+... |++++++.++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~ 48 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHG 48 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 5789999999999999998888877 9998888876
No 300
>PRK08263 short chain dehydrogenase; Provisional
Probab=93.56 E-value=0.53 Score=40.95 Aligned_cols=72 Identities=19% Similarity=0.269 Sum_probs=47.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCE-EEeCCCCChhh---h-------ccCccEE
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADK-VIDYRKTKYED---I-------EEKFDVL 216 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~---~-------~~~~d~v 216 (327)
+++++|+||+|.+|..++..+... |.++++..+++++.+.+.+ ++... .+..+-.+..+ . ..++|.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999988887777 8888888887766544433 33221 12111122111 1 1468999
Q ss_pred EeCCC
Q 020320 217 YDTIG 221 (327)
Q Consensus 217 ~d~~g 221 (327)
+.+.|
T Consensus 82 i~~ag 86 (275)
T PRK08263 82 VNNAG 86 (275)
T ss_pred EECCC
Confidence 99987
No 301
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.54 E-value=0.59 Score=40.51 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=28.6
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320 148 TGQTIFIVGGAG--GVGTLVIQLAKHFYGASHVVATTST 184 (327)
Q Consensus 148 ~~~~vlI~ga~g--~~G~~a~~la~~~~g~~~v~~~~~~ 184 (327)
.+++++|+||++ ++|.+++..+... |+++++..+++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~ 42 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND 42 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecch
Confidence 578999999875 8999877777766 88888776653
No 302
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.54 E-value=0.5 Score=41.22 Aligned_cols=73 Identities=26% Similarity=0.444 Sum_probs=45.6
Q ss_pred CCCCEEEEEcCCchHHHH-HHHHHHhhcCCcEEEEeCCcc-cHHHH---HHcCCC--EEEeCCC-CChhh-------hcc
Q 020320 147 KTGQTIFIVGGAGGVGTL-VIQLAKHFYGASHVVATTSTP-KVEFV---KELGAD--KVIDYRK-TKYED-------IEE 211 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~-a~~la~~~~g~~~v~~~~~~~-~~~~~---~~~g~~--~v~~~~~-~~~~~-------~~~ 211 (327)
-.|+.|||+||.+++|.+ |.++|+ + |++++..+.+.+ ..+.. ++.|-- .+.|-.+ ++..+ ..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~-r-g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAK-R-GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHH-h-CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999976 566666 5 787777775444 33333 344522 2222222 11111 225
Q ss_pred CccEEEeCCC
Q 020320 212 KFDVLYDTIG 221 (327)
Q Consensus 212 ~~d~v~d~~g 221 (327)
.+|++++.+|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 7999999998
No 303
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.54 E-value=0.42 Score=41.93 Aligned_cols=83 Identities=17% Similarity=0.257 Sum_probs=54.3
Q ss_pred HHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeC
Q 020320 141 FKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDT 219 (327)
Q Consensus 141 l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~ 219 (327)
++..+ .-.|++++|+|+++.+|...+.++... |+++.+.-+.. .+..+..+++|+++.+
T Consensus 150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~-gatVtv~~~~t-------------------~~L~~~~~~aDIvI~A 209 (283)
T PRK14192 150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNA-NATVTICHSRT-------------------QNLPELVKQADIIVGA 209 (283)
T ss_pred HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhC-CCEEEEEeCCc-------------------hhHHHHhccCCEEEEc
Confidence 34433 457899999995555999999999887 88443333311 1122233578899999
Q ss_pred CCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 220 IGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 220 ~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
+|... -....++++..++.++...
T Consensus 210 tG~~~~v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 210 VGKPELIKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred cCCCCcCCHHHcCCCCEEEEEEEee
Confidence 98542 2235678888888887654
No 304
>PRK06128 oxidoreductase; Provisional
Probab=93.49 E-value=0.55 Score=41.55 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS 183 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~ 183 (327)
.++++||+||+|.+|.+++..+... |+++++..++
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~i~~~~ 88 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFARE-GADIALNYLP 88 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHc-CCEEEEEeCC
Confidence 4689999999999999988888877 9988876654
No 305
>PRK06482 short chain dehydrogenase; Provisional
Probab=93.49 E-value=0.52 Score=40.97 Aligned_cols=71 Identities=20% Similarity=0.289 Sum_probs=46.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCE-EE--eCCCCC-hhh-------hccCccEEE
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADK-VI--DYRKTK-YED-------IEEKFDVLY 217 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~-v~--~~~~~~-~~~-------~~~~~d~v~ 217 (327)
+++||+||+|.+|...+..+... |.+++++.+++++.+.+.+ .+... ++ |-.+.. ... ...++|.+|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57999999999999988877777 8899888888776655433 23221 11 222111 111 124689999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
.++|
T Consensus 82 ~~ag 85 (276)
T PRK06482 82 SNAG 85 (276)
T ss_pred ECCC
Confidence 9887
No 306
>PRK08267 short chain dehydrogenase; Provisional
Probab=93.48 E-value=0.52 Score=40.57 Aligned_cols=71 Identities=24% Similarity=0.408 Sum_probs=47.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcC-CC-EE--EeCCCCC-hhhh--------ccCccE
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELG-AD-KV--IDYRKTK-YEDI--------EEKFDV 215 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g-~~-~v--~~~~~~~-~~~~--------~~~~d~ 215 (327)
+++||+||+|.+|...+..+... |.++++..+++++.+.+. .++ .. .+ .|-.+.. ..+. ..++|.
T Consensus 2 k~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 57999999999999998877777 899998888877655443 333 11 11 2222211 1111 236799
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.++|
T Consensus 81 vi~~ag 86 (260)
T PRK08267 81 LFNNAG 86 (260)
T ss_pred EEECCC
Confidence 999987
No 307
>PLN02780 ketoreductase/ oxidoreductase
Probab=93.47 E-value=0.16 Score=45.47 Aligned_cols=42 Identities=19% Similarity=0.237 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.|++++|+||++++|.+.+..+... |.+++++.+++++.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~-G~~Vil~~R~~~~l~~~ 93 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK-GLNLVLVARNPDKLKDV 93 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC-CCCEEEEECCHHHHHHH
Confidence 4899999999999999887777667 99999999988776544
No 308
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=93.47 E-value=0.15 Score=41.21 Aligned_cols=89 Identities=16% Similarity=0.205 Sum_probs=60.1
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc---CCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL---GADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
+|.|+||+|-+|....+=|+.+ |-.+.++++++++....+.. ..| +++ .+...+.+.+.|+|+++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~~~~~i~q~D-ifd--~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAARQGVTILQKD-IFD--LTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhC-CCeeEEEEeChHhccccccceeeccc-ccC--hhhhHhhhcCCceEEEeccCCCCCh
Confidence 5789999999999999999988 99999999998887543211 111 111 122235668999999998732
Q ss_pred --------hhhhhhhcCC--CcEEEeeCCC
Q 020320 224 --------KNSFVVAKDN--APIVDITWPP 243 (327)
Q Consensus 224 --------~~~~~~l~~~--g~~v~~g~~~ 243 (327)
...+..|+.. -|+..+|...
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 1234555553 3666676554
No 309
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=93.46 E-value=0.4 Score=39.15 Aligned_cols=72 Identities=26% Similarity=0.342 Sum_probs=50.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-CcccHHHHHHcCC--CEE-E--eCCCCChhh--------hccCcc
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STPKVEFVKELGA--DKV-I--DYRKTKYED--------IEEKFD 214 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~~~~~~~~~g~--~~v-~--~~~~~~~~~--------~~~~~d 214 (327)
.+..+|.|+++++|.+..+.+... |+++++.+. +.+..+.+.+++. +|. + |-++..-.+ .....+
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~-Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKK-GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhc-CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 356789999999999998888887 999998884 5556677788875 442 2 222211111 124689
Q ss_pred EEEeCCC
Q 020320 215 VLYDTIG 221 (327)
Q Consensus 215 ~v~d~~g 221 (327)
++++|.|
T Consensus 93 vlVncAG 99 (256)
T KOG1200|consen 93 VLVNCAG 99 (256)
T ss_pred EEEEcCc
Confidence 9999998
No 310
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.45 E-value=0.59 Score=41.57 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS 183 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~ 183 (327)
.+++++|+||++++|.++++.+... |++++++.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~-G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAA-GATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecc
Confidence 4789999999999999998888877 9998888775
No 311
>PRK05884 short chain dehydrogenase; Provisional
Probab=93.43 E-value=0.49 Score=39.86 Aligned_cols=70 Identities=17% Similarity=0.357 Sum_probs=45.9
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE-eCCCC-Chhhhc----cCccEEEeCCC
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI-DYRKT-KYEDIE----EKFDVLYDTIG 221 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~-~~~~~-~~~~~~----~~~d~v~d~~g 221 (327)
+++|+||+|.+|.+.++.+... |.++++..+++++.+.+ ++++...+. |-.+. ...... ..+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 5899999999999988888777 89998888877765543 444443322 22221 111111 25899998764
No 312
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=93.41 E-value=0.55 Score=40.00 Aligned_cols=41 Identities=24% Similarity=0.335 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
+++++||+||+|.+|..++..+... |.+++.+.++.++...
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~ 42 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEE-GAKVAVFDLNREAAEK 42 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHH
Confidence 4688999999999999998888877 8888888877665433
No 313
>PRK06398 aldose dehydrogenase; Validated
Probab=93.40 E-value=0.41 Score=41.27 Aligned_cols=38 Identities=21% Similarity=0.434 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK 186 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~ 186 (327)
.++++||+|+++++|.+++..+... |.++++..+++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~ 42 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPS 42 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCccc
Confidence 4689999999999999998888877 8999888876543
No 314
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.36 E-value=1 Score=39.33 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=65.5
Q ss_pred ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..+ --.|++++|.|.+..+|.-.+.++... ++.+.+.- ++..+..
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~atVt~ch-------------------s~T~~l~ 197 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEM-NATVTLCH-------------------SKTQNLP 197 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeC-------------------CCCCCHH
Confidence 34555444444555444 357999999999999999988888877 76555332 1222344
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 198 ~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 198 SIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNP 234 (284)
T ss_pred HHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCcc
Confidence 45567899999999763 3456788999999998644
No 315
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.35 E-value=0.7 Score=39.63 Aligned_cols=73 Identities=23% Similarity=0.346 Sum_probs=45.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC-cccHHHHHHcCCCEE-EeCCCC-Chhhh-------ccCccEEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS-TPKVEFVKELGADKV-IDYRKT-KYEDI-------EEKFDVLY 217 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~-~~~~~~~~~~g~~~v-~~~~~~-~~~~~-------~~~~d~v~ 217 (327)
.+++++|+|++|++|.++++.+... |.++++..+. ++..+.+++.+...+ .|-.+. ..... ..++|.++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999988888777 8888776643 333333333333222 122211 11111 14689999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
.+.|
T Consensus 85 ~~ag 88 (255)
T PRK06463 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 9886
No 316
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=93.35 E-value=0.34 Score=42.63 Aligned_cols=71 Identities=17% Similarity=0.219 Sum_probs=46.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcC----CCEEEeCCCCChhhhccCccEEEeCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELG----ADKVIDYRKTKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g----~~~v~~~~~~~~~~~~~~~d~v~d~~ 220 (327)
..+++++|+| +|+.|.+++..+..+ |+ ++.++.++.++.+.+ ++++ ...+... .+.......+|++++|+
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~-G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~~~~~~~aDiVInaT 200 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTL-GVERLTIFDVDPARAAALADELNARFPAARATAG--SDLAAALAAADGLVHAT 200 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cchHhhhCCCCEEEECC
Confidence 3568899999 899999999988888 77 455555776655433 4442 1122221 12233456799999995
Q ss_pred C
Q 020320 221 G 221 (327)
Q Consensus 221 g 221 (327)
.
T Consensus 201 p 201 (284)
T PRK12549 201 P 201 (284)
T ss_pred c
Confidence 3
No 317
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=93.34 E-value=0.5 Score=40.41 Aligned_cols=70 Identities=17% Similarity=0.330 Sum_probs=46.7
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH-HcCCCEE-EeCCCCChh---hh-------ccCccEEEe
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK-ELGADKV-IDYRKTKYE---DI-------EEKFDVLYD 218 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~---~~-------~~~~d~v~d 218 (327)
+++|+|++|.+|.+.+..+... |.+++++.+++++.+.+. .++.... +..+-.+.. +. ..++|.++.
T Consensus 2 ~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6899999999999998888877 999998888877655443 3443221 211111111 11 136899998
Q ss_pred CCC
Q 020320 219 TIG 221 (327)
Q Consensus 219 ~~g 221 (327)
++|
T Consensus 81 ~ag 83 (248)
T PRK10538 81 NAG 83 (248)
T ss_pred CCC
Confidence 876
No 318
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.33 E-value=1 Score=39.38 Aligned_cols=95 Identities=21% Similarity=0.285 Sum_probs=66.3
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..++ -.|++++|.|.+..+|.-.+.++... ++.+.+.-. +..+..
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~-~atVt~chs-------------------~t~~l~ 196 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNE-NATVTYCHS-------------------KTKNLA 196 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEEeC-------------------CchhHH
Confidence 346555445555565554 57999999999999999998888877 776654321 112334
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 197 ~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 197 ELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccc
Confidence 45567899999999663 3345678999999998765
No 319
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=93.33 E-value=0.58 Score=40.18 Aligned_cols=73 Identities=21% Similarity=0.282 Sum_probs=45.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc--cHHHHHHcCCCE-EEeCCCCChh---hh-------ccCcc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP--KVEFVKELGADK-VIDYRKTKYE---DI-------EEKFD 214 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~--~~~~~~~~g~~~-v~~~~~~~~~---~~-------~~~~d 214 (327)
.+++++|+|++|++|.++++.+... |++++....++. ..+.+++.+... .+..+-.+.. .. ..++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEA-GCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999998888877 998887654332 122233344221 1211112211 11 14689
Q ss_pred EEEeCCC
Q 020320 215 VLYDTIG 221 (327)
Q Consensus 215 ~v~d~~g 221 (327)
++++++|
T Consensus 88 ~li~~Ag 94 (253)
T PRK08993 88 ILVNNAG 94 (253)
T ss_pred EEEECCC
Confidence 9999887
No 320
>PRK06484 short chain dehydrogenase; Validated
Probab=93.32 E-value=0.51 Score=45.29 Aligned_cols=74 Identities=22% Similarity=0.382 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-E--eCCCC-Chhhh-------ccCcc
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-I--DYRKT-KYEDI-------EEKFD 214 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~--~~~~~-~~~~~-------~~~~d 214 (327)
..++++||+||++++|.+.++.+... |.+++++.+++++.+.+ ++++.... + |-.+. ..... ...+|
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAA-GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999999999999988877777 89999888877766544 34553321 2 22221 11111 14689
Q ss_pred EEEeCCC
Q 020320 215 VLYDTIG 221 (327)
Q Consensus 215 ~v~d~~g 221 (327)
+++.++|
T Consensus 346 ~li~nAg 352 (520)
T PRK06484 346 VLVNNAG 352 (520)
T ss_pred EEEECCC
Confidence 9999877
No 321
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.30 E-value=0.2 Score=42.77 Aligned_cols=42 Identities=24% Similarity=0.348 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+.+++|+||+|.+|..++..+... |.+++++.+++++.+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~ 45 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERV 45 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4578999999999999988888777 89988888887765444
No 322
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.27 E-value=0.66 Score=40.40 Aligned_cols=37 Identities=32% Similarity=0.563 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~ 185 (327)
.+++++|+||+|.+|...+..+... |++++++.++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccc
Confidence 4679999999999999988877777 899888887543
No 323
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.24 E-value=1.1 Score=39.08 Aligned_cols=95 Identities=16% Similarity=0.204 Sum_probs=66.0
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..++ -.|++++|.|.+..+|.=.+.++... ++.+.+.- ++..+..
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~atVtich-------------------s~T~~l~ 194 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNH-DATVTIAH-------------------SKTRNLK 194 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEEC-------------------CCCCCHH
Confidence 345555445555555443 57899999999999999888888877 76554331 1222344
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 195 ~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 195 QLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISR 231 (282)
T ss_pred HHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccc
Confidence 45567899999999763 3446788999999998755
No 324
>PRK07806 short chain dehydrogenase; Provisional
Probab=93.23 E-value=0.72 Score=39.30 Aligned_cols=36 Identities=25% Similarity=0.415 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~ 184 (327)
.+++++|+|++|.+|...+..+... |.++++..++.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~ 40 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQK 40 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 4678999999999999998888877 88888877754
No 325
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=93.22 E-value=0.42 Score=42.61 Aligned_cols=73 Identities=12% Similarity=0.320 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH---c-CC--C-EEE--eCC-CCChhhhccCccEEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE---L-GA--D-KVI--DYR-KTKYEDIEEKFDVLY 217 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~---~-g~--~-~v~--~~~-~~~~~~~~~~~d~v~ 217 (327)
.+.+|||+||+|-+|..++..+... |.++++++++.++...... + +. . ..+ |-. ...+.....++|.||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 3578999999999999988888887 8888888876554322211 1 11 1 112 111 123444457899999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
.+++
T Consensus 82 h~A~ 85 (322)
T PLN02662 82 HTAS 85 (322)
T ss_pred EeCC
Confidence 8876
No 326
>PRK07074 short chain dehydrogenase; Provisional
Probab=93.20 E-value=0.67 Score=39.76 Aligned_cols=72 Identities=19% Similarity=0.283 Sum_probs=46.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE--EEeCCCCChhh---hc-------cCccE
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK--VIDYRKTKYED---IE-------EKFDV 215 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~--v~~~~~~~~~~---~~-------~~~d~ 215 (327)
+++++|+|++|.+|...+..+... |.+++++.+++++.+.+ +++.... .+..+-.+... .. +++|.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999999999999988887777 88988888876655433 3332111 12111112111 11 35899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.+.|
T Consensus 81 vi~~ag 86 (257)
T PRK07074 81 LVANAG 86 (257)
T ss_pred EEECCC
Confidence 999887
No 327
>PLN02427 UDP-apiose/xylose synthase
Probab=93.20 E-value=0.33 Score=44.68 Aligned_cols=78 Identities=12% Similarity=0.097 Sum_probs=48.6
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC-------CCEEE-eCCC-CChhhhccCcc
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG-------ADKVI-DYRK-TKYEDIEEKFD 214 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g-------~~~v~-~~~~-~~~~~~~~~~d 214 (327)
++..+..+|||+||+|-+|..++..+...++.++++++++.++...+...+ .+.+. |-.+ ..+....+++|
T Consensus 9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 334455689999999999998888777663477887777655544333222 11111 1111 22333456799
Q ss_pred EEEeCCC
Q 020320 215 VLYDTIG 221 (327)
Q Consensus 215 ~v~d~~g 221 (327)
+||.+++
T Consensus 89 ~ViHlAa 95 (386)
T PLN02427 89 LTINLAA 95 (386)
T ss_pred EEEEccc
Confidence 9999886
No 328
>PRK06953 short chain dehydrogenase; Provisional
Probab=93.19 E-value=0.47 Score=39.80 Aligned_cols=71 Identities=20% Similarity=0.362 Sum_probs=47.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEE-EeCCCCC-hhhh---c--cCccEEEeCCC
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKV-IDYRKTK-YEDI---E--EKFDVLYDTIG 221 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v-~~~~~~~-~~~~---~--~~~d~v~d~~g 221 (327)
++++|+|++|.+|..+++.+... |++++.+.++++..+.+...+...+ .|-.+.. .... . .++|.++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRAD-GWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhC-CCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence 47899999999999988877666 8998888887776665555554322 2222211 1111 1 25899998876
No 329
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=93.19 E-value=0.31 Score=35.65 Aligned_cols=83 Identities=22% Similarity=0.402 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---h
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---K 224 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~ 224 (327)
.|.+|||.| .|.+|..-++.+... |+++.++.... ...+ +. +......+...+.++++|+.+.+.. .
T Consensus 6 ~~~~vlVvG-gG~va~~k~~~Ll~~-gA~v~vis~~~---~~~~--~~---i~~~~~~~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVG-GGPVAARKARLLLEA-GAKVTVISPEI---EFSE--GL---IQLIRREFEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEE-ESHHHHHHHHHHCCC-TBEEEEEESSE---HHHH--TS---CEEEESS-GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCch---hhhh--hH---HHHHhhhHHHHHhhheEEEecCCCHHHHH
Confidence 578999999 799999988888887 88888887765 2222 21 1112223445567899999998854 3
Q ss_pred hhhhhhcCCCcEEEee
Q 020320 225 NSFVVAKDNAPIVDIT 240 (327)
Q Consensus 225 ~~~~~l~~~g~~v~~g 240 (327)
......+..|..+...
T Consensus 76 ~i~~~a~~~~i~vn~~ 91 (103)
T PF13241_consen 76 AIYADARARGILVNVV 91 (103)
T ss_dssp HHHHHHHHTTSEEEET
T ss_pred HHHHHHhhCCEEEEEC
Confidence 3444445566666654
No 330
>PRK06138 short chain dehydrogenase; Provisional
Probab=93.18 E-value=0.52 Score=40.22 Aligned_cols=73 Identities=25% Similarity=0.339 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc--CCC-EEEeCCCCChhh---h-------ccCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL--GAD-KVIDYRKTKYED---I-------EEKF 213 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~--g~~-~v~~~~~~~~~~---~-------~~~~ 213 (327)
.+++++|+|++|.+|...+..+... |.+++.+.++.++.... .++ +.. ..+..+-.+... . ..++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999988877777 88888888776654332 222 221 122111122111 1 1478
Q ss_pred cEEEeCCC
Q 020320 214 DVLYDTIG 221 (327)
Q Consensus 214 d~v~d~~g 221 (327)
|.++.+.|
T Consensus 83 d~vi~~ag 90 (252)
T PRK06138 83 DVLVNNAG 90 (252)
T ss_pred CEEEECCC
Confidence 99999887
No 331
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.11 E-value=1.2 Score=38.79 Aligned_cols=95 Identities=22% Similarity=0.302 Sum_probs=65.8
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..+. -.|++++|.|.+..+|.-...++... ++.+.+.-. +..+..
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~-~AtVt~chs-------------------~T~~l~ 196 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNE-NATVTICHS-------------------KTKNLK 196 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCC-------------------CCCCHH
Confidence 345555445555565554 57999999999999999988888876 765543321 222334
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 197 ~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 197 EVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccc
Confidence 44567899999999763 3346688999999998655
No 332
>PLN02686 cinnamoyl-CoA reductase
Probab=93.11 E-value=0.27 Score=44.98 Aligned_cols=43 Identities=16% Similarity=0.251 Sum_probs=34.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
..+++|||+||+|.+|..++..+... |.+++++.++.++...+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l 93 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKL 93 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 45789999999999999999888877 88888877765544333
No 333
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.07 E-value=1.2 Score=38.87 Aligned_cols=95 Identities=19% Similarity=0.188 Sum_probs=65.5
Q ss_pred ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..+ .-.|++++|.|.+..+|.=.+.++... ++.+.+.-. +..+..
T Consensus 137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~-~ATVt~chs-------------------~T~dl~ 196 (282)
T PRK14180 137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-KATVTTCHR-------------------FTTDLK 196 (282)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEEcC-------------------CCCCHH
Confidence 44655545555565544 346999999999999999988888877 775543321 122334
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus 197 ~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 197 SHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINH 233 (282)
T ss_pred HHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccc
Confidence 44567899999999763 3346788898999998654
No 334
>PRK12743 oxidoreductase; Provisional
Probab=93.07 E-value=0.71 Score=39.66 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=28.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~ 182 (327)
+++++|+||++.+|..+++.+... |.++++..+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~ 34 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWH 34 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeC
Confidence 468999999999999998888887 998887764
No 335
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.07 E-value=1.1 Score=39.05 Aligned_cols=95 Identities=23% Similarity=0.252 Sum_probs=65.8
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..+. -.|++++|.|.+..+|.=...++... ++.+.+.- ++..+..
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~-~atVtich-------------------s~T~~l~ 195 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE-NATVTIAH-------------------SRTKDLP 195 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeC-------------------CCCCCHH
Confidence 346555445555555554 46999999999999999888888876 76554331 1222344
Q ss_pred hhccCccEEEeCCCCchh-hhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCKN-SFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~~-~~~~l~~~g~~v~~g~~~ 243 (327)
+..+.+|+++-++|.... .-..+++|..++.+|...
T Consensus 196 ~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 196 QVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDR 232 (284)
T ss_pred HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcc
Confidence 455678999999997643 346788999999998654
No 336
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=93.06 E-value=0.21 Score=45.98 Aligned_cols=87 Identities=22% Similarity=0.305 Sum_probs=54.1
Q ss_pred EEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHHHH--cCC--CE-EEeCCC-CChhhhccCccEEEeCCCCc-
Q 020320 152 IFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFVKE--LGA--DK-VIDYRK-TKYEDIEEKFDVLYDTIGDC- 223 (327)
Q Consensus 152 vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~~~--~g~--~~-v~~~~~-~~~~~~~~~~d~v~d~~g~~- 223 (327)
|+|+|+ |.+|..++..+...... +++++.++.++.+.+.+ .+. .. .+|..+ ....+.+++.|+|++|+|..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 789997 99999999998887344 77888899888666543 222 11 223222 22344567899999999854
Q ss_pred --hhhhhhhcCCCcEEEe
Q 020320 224 --KNSFVVAKDNAPIVDI 239 (327)
Q Consensus 224 --~~~~~~l~~~g~~v~~ 239 (327)
.-+-.|++.+-.++..
T Consensus 80 ~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDT 97 (386)
T ss_dssp HHHHHHHHHHHT-EEEES
T ss_pred hHHHHHHHHHhCCCeecc
Confidence 2334566667677763
No 337
>PRK07791 short chain dehydrogenase; Provisional
Probab=93.05 E-value=0.8 Score=40.22 Aligned_cols=37 Identities=24% Similarity=0.383 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~ 184 (327)
-.+++++|+||++++|.+.++.+... |+++++..++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~-G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeeCCc
Confidence 46789999999999999988877777 89888877543
No 338
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=93.01 E-value=1.5 Score=36.50 Aligned_cols=97 Identities=16% Similarity=0.097 Sum_probs=60.5
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHH----HcCCC---EEEeCCCCChhhhccC
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVK----ELGAD---KVIDYRKTKYEDIEEK 212 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~~~~~ 212 (327)
++...++++++||=.| || .|..+..+++..+ +.+++.++.+++..+.++ ..+.. .++..+..........
T Consensus 65 ~~~l~~~~~~~VLDiG-~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~~ 142 (205)
T PRK13944 65 CELIEPRPGMKILEVG-TG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHAP 142 (205)
T ss_pred HHhcCCCCCCEEEEEC-cC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCCC
Confidence 4556788999999998 44 4667777777652 246777788877665554 34432 2222222111112246
Q ss_pred ccEEEeCCC--Cc-hhhhhhhcCCCcEEEe
Q 020320 213 FDVLYDTIG--DC-KNSFVVAKDNAPIVDI 239 (327)
Q Consensus 213 ~d~v~d~~g--~~-~~~~~~l~~~g~~v~~ 239 (327)
+|.++-+.. .. ....+.|+++|+++..
T Consensus 143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 143 FDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred ccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 899885543 22 5667889999998764
No 339
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=92.99 E-value=0.74 Score=39.51 Aligned_cols=40 Identities=25% Similarity=0.378 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.+++++|+|+++.+|..++..+... |++++++.+++++.+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~-G~~vv~~~r~~~~~~ 49 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAAN 49 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHH
Confidence 4789999999999999988888877 999888887666543
No 340
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=92.98 E-value=0.17 Score=45.07 Aligned_cols=70 Identities=20% Similarity=0.295 Sum_probs=47.3
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g 221 (327)
+++|+|++|.+|...++.+... |.+++++.+++++.....+.+...+. |..+ ....+...++|.++++++
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHC-CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 6899999999999998888877 88888888876654333333433322 2222 223334567899998875
No 341
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=92.98 E-value=2.6 Score=38.92 Aligned_cols=96 Identities=23% Similarity=0.313 Sum_probs=61.0
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCccc-HHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 144 AGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPK-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 144 ~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
.+--.+.++||+| +|-+|..++..+... |...+.+. ++.+| .++++++|+..+- . ++....+..+|+||.+++
T Consensus 173 ~~~L~~~~vlvIG-AGem~~lva~~L~~~-g~~~i~IaNRT~erA~~La~~~~~~~~~-l--~el~~~l~~~DvVissTs 247 (414)
T COG0373 173 FGSLKDKKVLVIG-AGEMGELVAKHLAEK-GVKKITIANRTLERAEELAKKLGAEAVA-L--EELLEALAEADVVISSTS 247 (414)
T ss_pred hcccccCeEEEEc-ccHHHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHHhCCeeec-H--HHHHHhhhhCCEEEEecC
Confidence 3334678999999 788888777777776 76666666 66664 4667889965431 1 123334568999999998
Q ss_pred Cch------hhhhhhcCCCc--EEEeeCCCC
Q 020320 222 DCK------NSFVVAKDNAP--IVDITWPPS 244 (327)
Q Consensus 222 ~~~------~~~~~l~~~g~--~v~~g~~~~ 244 (327)
+++ .....++..-+ +++++.|..
T Consensus 248 a~~~ii~~~~ve~a~~~r~~~livDiavPRd 278 (414)
T COG0373 248 APHPIITREMVERALKIRKRLLIVDIAVPRD 278 (414)
T ss_pred CCccccCHHHHHHHHhcccCeEEEEecCCCC
Confidence 652 22234443333 556666653
No 342
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=92.92 E-value=0.26 Score=45.18 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=46.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCC-CChhhhccCccEEEeCCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRK-TKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~~d~v~d~~g 221 (327)
..+++|||+|++|-+|..++..+... |.+++++++..........++...+. |-.+ ..+.....++|.||.+++
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAE-GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhC-CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 46789999999999999999999888 88888887643221100111222221 2111 112223457899999874
No 343
>PRK07576 short chain dehydrogenase; Provisional
Probab=92.91 E-value=0.25 Score=42.85 Aligned_cols=40 Identities=33% Similarity=0.526 Sum_probs=33.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
++++++|+||+|.+|..+++.+... |.+++++.+++++.+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~ 47 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVD 47 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence 5789999999999999998888877 999888888766543
No 344
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.91 E-value=0.79 Score=39.53 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=28.7
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCC
Q 020320 148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTS 183 (327)
Q Consensus 148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~ 183 (327)
.+++++|+||+ +++|.++++.+... |.+++++.++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~-G~~v~~~~r~ 42 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNA-GAKLVFTYAG 42 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEecCc
Confidence 47899999986 79999988777777 8988877654
No 345
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=92.90 E-value=0.58 Score=46.54 Aligned_cols=41 Identities=29% Similarity=0.418 Sum_probs=34.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
.++++||+|++|.+|.+++..+... |++++++.++.++.+.
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~ 453 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEA 453 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHH
Confidence 4789999999999999988888777 9999988887665443
No 346
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=92.87 E-value=0.73 Score=39.05 Aligned_cols=73 Identities=25% Similarity=0.411 Sum_probs=46.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCE-EEeCCCCChhh----------hccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADK-VIDYRKTKYED----------IEEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~----------~~~~~d~ 215 (327)
.+.+++|+|++|.+|..++..+... |..++...++.++.+.. .+++... .+..+-.+... ...++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQ-GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4679999999999999988887777 88776666665554433 3444322 22111111111 1246899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.+.|
T Consensus 84 vi~~ag 89 (245)
T PRK12936 84 LVNNAG 89 (245)
T ss_pred EEECCC
Confidence 999887
No 347
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=92.85 E-value=0.41 Score=42.71 Aligned_cols=101 Identities=20% Similarity=0.257 Sum_probs=70.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|+++.|+| .|.+|..++.+++.+ |.++++..+..... +.+.. ..++.+.+...|+++-++...
T Consensus 144 ~gktvGIiG-~G~IG~~vA~~~~~f-gm~V~~~d~~~~~~----~~~~~------~~~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIG-LGTIGKRVAKIAQAF-GAKVVYYSTSGKNK----NEEYE------RVSLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhc-CCEEEEECCCcccc----ccCce------eecHHHHhhcCCEEEEeCCCCchhh
Confidence 588999999 999999999999997 99999887653211 11211 123555667789998776521
Q ss_pred ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
...+..|+++..++.++-... ++ -+.+++.+++|++.
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aRG~v----------VD---e~AL~~AL~~g~i~ 252 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGRGGI----------VN---EKDLAKALDEKDIY 252 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCeE
Confidence 556788999998888863331 12 24567778888876
No 348
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=92.85 E-value=0.25 Score=42.44 Aligned_cols=40 Identities=20% Similarity=0.393 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.++++||+|++|.+|.++++.+... |.++++..+++++.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~ 48 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLA 48 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHH
Confidence 5789999999999999998888777 899888887766543
No 349
>PRK07063 short chain dehydrogenase; Provisional
Probab=92.84 E-value=0.25 Score=42.51 Aligned_cols=42 Identities=21% Similarity=0.357 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+++++|+|+++++|.+++..+... |++++++.+++++.+.+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~ 47 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERA 47 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4689999999999999988888877 99998888876655433
No 350
>PRK07775 short chain dehydrogenase; Provisional
Probab=92.83 E-value=0.76 Score=40.01 Aligned_cols=72 Identities=17% Similarity=0.267 Sum_probs=46.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhhh----------ccCc
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYEDI----------EEKF 213 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~----------~~~~ 213 (327)
.++++|+||+|.+|.+.+..+... |.+++++.++.++...+ +..+.... +..+-.+..+. ..++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999998888777 88888888766554332 22343321 12222222211 2368
Q ss_pred cEEEeCCC
Q 020320 214 DVLYDTIG 221 (327)
Q Consensus 214 d~v~d~~g 221 (327)
|.+|.++|
T Consensus 89 d~vi~~Ag 96 (274)
T PRK07775 89 EVLVSGAG 96 (274)
T ss_pred CEEEECCC
Confidence 99998887
No 351
>PRK08703 short chain dehydrogenase; Provisional
Probab=92.82 E-value=0.27 Score=41.78 Aligned_cols=42 Identities=26% Similarity=0.431 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+++++|+|++|.+|...++.+... |.+++++.+++++.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~ 46 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKV 46 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHH
Confidence 4679999999999999988888877 89988888887765433
No 352
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=92.82 E-value=0.75 Score=40.44 Aligned_cols=73 Identities=22% Similarity=0.279 Sum_probs=44.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHH-HHcC----CCEEEeCCCCChhhhccCccEEEeCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFV-KELG----ADKVIDYRKTKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~-~~~g----~~~v~~~~~~~~~~~~~~~d~v~d~~ 220 (327)
..+++++|+| +|+.+.+++..+..+ |++ +.++.++.+|.+.+ +++. ...+..............+|++++++
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT 202 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence 3478999999 799999988888777 765 44555776664443 3332 21121111011122345689999987
Q ss_pred C
Q 020320 221 G 221 (327)
Q Consensus 221 g 221 (327)
.
T Consensus 203 p 203 (283)
T PRK14027 203 P 203 (283)
T ss_pred C
Confidence 5
No 353
>PRK07062 short chain dehydrogenase; Provisional
Probab=92.80 E-value=0.27 Score=42.51 Aligned_cols=41 Identities=22% Similarity=0.454 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
.+++++|+||++++|.+.++.+... |++++++.+++++.+.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~ 47 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLAS 47 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHH
Confidence 4789999999999999988888877 9999988888776543
No 354
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=92.78 E-value=0.71 Score=42.66 Aligned_cols=78 Identities=22% Similarity=0.320 Sum_probs=49.9
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-------HHHHc-CCCEEE-eCCC-CChhhhcc-
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-------FVKEL-GADKVI-DYRK-TKYEDIEE- 211 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-------~~~~~-g~~~v~-~~~~-~~~~~~~~- 211 (327)
+.+...+.+|+|+||+|.+|..++..+... |.++++++++..+.. ..... +.+.+. |..+ +.+.....
T Consensus 54 ~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~ 132 (390)
T PLN02657 54 RSKEPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFS 132 (390)
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHH
Confidence 344566789999999999999998888877 899988887654321 11122 233222 2222 22222233
Q ss_pred ---CccEEEeCCC
Q 020320 212 ---KFDVLYDTIG 221 (327)
Q Consensus 212 ---~~d~v~d~~g 221 (327)
++|+|++|++
T Consensus 133 ~~~~~D~Vi~~aa 145 (390)
T PLN02657 133 EGDPVDVVVSCLA 145 (390)
T ss_pred hCCCCcEEEECCc
Confidence 6999999876
No 355
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=92.78 E-value=0.82 Score=39.44 Aligned_cols=95 Identities=18% Similarity=0.186 Sum_probs=63.9
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCC
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~ 220 (327)
+......++.+||=+| ||. |..+..+++...+.+++.++.++...+.+++.+.+.+.. +-..+. ....+|+|+...
T Consensus 22 l~~l~~~~~~~vLDlG-cG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~~-d~~~~~-~~~~fD~v~~~~ 97 (255)
T PRK14103 22 LARVGAERARRVVDLG-CGP-GNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDARTG-DVRDWK-PKPDTDVVVSNA 97 (255)
T ss_pred HHhCCCCCCCEEEEEc-CCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEEc-ChhhCC-CCCCceEEEEeh
Confidence 4556677889999888 665 667778887654678888889988888887766554332 111111 124689998644
Q ss_pred C-----C----chhhhhhhcCCCcEEEe
Q 020320 221 G-----D----CKNSFVVAKDNAPIVDI 239 (327)
Q Consensus 221 g-----~----~~~~~~~l~~~g~~v~~ 239 (327)
. . ...+.+.|+|+|.++..
T Consensus 98 ~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 98 ALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 3 1 14566789999998764
No 356
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.76 E-value=0.69 Score=39.97 Aligned_cols=73 Identities=23% Similarity=0.362 Sum_probs=43.4
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHhhcCCcEEEEeCC---cccHH-HHHHcCCCEEE--eCCCC-Chhh-------hcc
Q 020320 148 TGQTIFIVGG--AGGVGTLVIQLAKHFYGASHVVATTS---TPKVE-FVKELGADKVI--DYRKT-KYED-------IEE 211 (327)
Q Consensus 148 ~~~~vlI~ga--~g~~G~~a~~la~~~~g~~~v~~~~~---~~~~~-~~~~~g~~~v~--~~~~~-~~~~-------~~~ 211 (327)
.+++++|+|| ++++|.+++..+... |+++++..+. +++.+ +.++++....+ |-.+. .... ..+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHC-CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4789999996 579999987777766 8988876532 22222 22344532222 22111 1111 124
Q ss_pred CccEEEeCCC
Q 020320 212 KFDVLYDTIG 221 (327)
Q Consensus 212 ~~d~v~d~~g 221 (327)
++|+++++.|
T Consensus 84 ~iD~lvnnAG 93 (260)
T PRK06997 84 GLDGLVHSIG 93 (260)
T ss_pred CCcEEEEccc
Confidence 6899998876
No 357
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.72 E-value=1.4 Score=38.77 Aligned_cols=95 Identities=17% Similarity=0.181 Sum_probs=65.3
Q ss_pred ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..+ --.|++++|.|.+..+|.=...++... ++.+.+.-. +..+..
T Consensus 139 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~aTVt~chs-------------------~T~~l~ 198 (294)
T PRK14187 139 LIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGE-NCTVTTVHS-------------------ATRDLA 198 (294)
T ss_pred ccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhC-CCEEEEeCC-------------------CCCCHH
Confidence 34555544555565544 357999999999999999888888876 665553222 122334
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus 199 ~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~ 235 (294)
T PRK14187 199 DYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINS 235 (294)
T ss_pred HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence 44567899999999763 3446778898999998654
No 358
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.72 E-value=1.4 Score=38.58 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=65.1
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..++ -.|++++|.|.+..+|.=...++... ++.+.+.- + +..+..
T Consensus 138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~-~ATVtich-s------------------~T~~L~ 197 (288)
T PRK14171 138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKE-NCSVTICH-S------------------KTHNLS 197 (288)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeC-C------------------CCCCHH
Confidence 345554445555555443 57899999999999999888888876 76554221 1 222344
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 198 ~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~ 234 (288)
T PRK14171 198 SITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINR 234 (288)
T ss_pred HHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccc
Confidence 45567899999999764 3347788999999998654
No 359
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=92.69 E-value=2.1 Score=35.90 Aligned_cols=97 Identities=22% Similarity=0.175 Sum_probs=60.1
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCC--cEEEEeCCcccHHHHH----HcCCCEE--EeCCCCChhhhcc
Q 020320 140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGA--SHVVATTSTPKVEFVK----ELGADKV--IDYRKTKYEDIEE 211 (327)
Q Consensus 140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~--~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~ 211 (327)
.++...++++++||=.| +| .|..+..+++.. +. +++.++.+++..+.++ +.|.+.+ +..+.........
T Consensus 69 ~~~~l~~~~~~~VLDiG-~G-sG~~a~~la~~~-~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~ 145 (215)
T TIGR00080 69 MTELLELKPGMKVLEIG-TG-SGYQAAVLAEIV-GRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLA 145 (215)
T ss_pred HHHHhCCCCcCEEEEEC-CC-ccHHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccC
Confidence 44556788999999998 44 466666777765 43 4777778877666553 3554332 2222111111224
Q ss_pred CccEEEeCCC--C-chhhhhhhcCCCcEEEe
Q 020320 212 KFDVLYDTIG--D-CKNSFVVAKDNAPIVDI 239 (327)
Q Consensus 212 ~~d~v~d~~g--~-~~~~~~~l~~~g~~v~~ 239 (327)
.+|+++-... . .....+.|+++|+++..
T Consensus 146 ~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 146 PYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred CCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 6998884432 2 25677899999998765
No 360
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=92.69 E-value=1.6 Score=38.53 Aligned_cols=95 Identities=22% Similarity=0.228 Sum_probs=65.5
Q ss_pred ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..+ --.|++++|.|.+..+|.=...++... ++.+.+.-. +..+..
T Consensus 146 ~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~-~ATVtvchs-------------------~T~nl~ 205 (299)
T PLN02516 146 FLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKA-DATVTVVHS-------------------RTPDPE 205 (299)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCC-------------------CCCCHH
Confidence 45666555555565544 346999999999999999888888877 765554321 112234
Q ss_pred hhccCccEEEeCCCCc-hhhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDC-KNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~-~~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|.. .-.-..+++|..++.+|...
T Consensus 206 ~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~ 242 (299)
T PLN02516 206 SIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNA 242 (299)
T ss_pred HHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccc
Confidence 4456789999999965 33456789999999998654
No 361
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.67 E-value=1.5 Score=38.61 Aligned_cols=95 Identities=17% Similarity=0.168 Sum_probs=64.8
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..++ -.|++++|.|.+..+|.=...++... ++.+.+.- ++..+..
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~-~atVtv~h-------------------s~T~~l~ 196 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAA-NATVTIAH-------------------SRTQDLA 196 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeC-------------------CCCCCHH
Confidence 345554444555555554 47899999999999999988888877 77554332 1122333
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 197 ~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~ 233 (297)
T PRK14186 197 SITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHR 233 (297)
T ss_pred HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence 44567899999999663 3346788888888998654
No 362
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=92.67 E-value=0.42 Score=37.89 Aligned_cols=33 Identities=27% Similarity=0.504 Sum_probs=25.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEE-EEeCC
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHV-VATTS 183 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v-~~~~~ 183 (327)
++++|+||++++|.+.++.+... |.+++ .+.++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~-g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARR-GARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-TTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CceEEEEeeec
Confidence 47899999999999988777777 66554 44566
No 363
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.66 E-value=1.5 Score=38.35 Aligned_cols=95 Identities=17% Similarity=0.193 Sum_probs=65.8
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..+. -.|++++|.|.+..+|.=.+.++... ++.+.+.-. +..+..
T Consensus 136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~-~atVt~chs-------------------~T~nl~ 195 (282)
T PRK14166 136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-GATVSVCHI-------------------KTKDLS 195 (282)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCC-------------------CCCCHH
Confidence 446665555555665543 57999999999999999888888876 665542221 122334
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 196 ~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~ 232 (282)
T PRK14166 196 LYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINR 232 (282)
T ss_pred HHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccc
Confidence 44567899999999763 3446788999999998654
No 364
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=92.59 E-value=0.98 Score=40.23 Aligned_cols=84 Identities=18% Similarity=0.192 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--- 223 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--- 223 (327)
-.|++|.|+| .|.+|.+.++.++.. |.++++..+.....+.++..|.. +. +..+.....|+++-++...
T Consensus 14 LkgKtVGIIG-~GsIG~amA~nL~d~-G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIG-YGSQGHAQAQNLRDS-GVEVVVGVRPGKSFEVAKADGFE-VM-----SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEe-EcHHHHHHHHHHHHC-cCEEEEEECcchhhHHHHHcCCE-EC-----CHHHHHhcCCEEEEeCCChHHH
Confidence 4678999999 999999999999988 99998887665555566666753 21 3556667889998777531
Q ss_pred ----hhhhhhhcCCCcEEE
Q 020320 224 ----KNSFVVAKDNAPIVD 238 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~ 238 (327)
...+..|+++..++.
T Consensus 86 ~V~~~eil~~MK~GaiL~f 104 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLF 104 (335)
T ss_pred HHHHHHHHhcCCCCCEEEE
Confidence 234556677665443
No 365
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=92.50 E-value=0.87 Score=37.35 Aligned_cols=92 Identities=24% Similarity=0.364 Sum_probs=56.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE--EeCCCCChhhhccCccEEEeC
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV--IDYRKTKYEDIEEKFDVLYDT 219 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~~~d~v~d~ 219 (327)
+.++.+||-.| || .|..+..+++...+.+++.++.+++..+.++ +.+.+.+ +..+..++.. ...+|+++..
T Consensus 43 l~~g~~VLDiG-cG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~ 119 (187)
T PRK00107 43 LPGGERVLDVG-SG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSR 119 (187)
T ss_pred cCCCCeEEEEc-CC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEc
Confidence 44588999888 44 3555556665544678888888888766654 4554432 2222122222 3469999854
Q ss_pred C-CCc----hhhhhhhcCCCcEEEee
Q 020320 220 I-GDC----KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 220 ~-g~~----~~~~~~l~~~g~~v~~g 240 (327)
. +.. ..+.+.|+++|+++.+-
T Consensus 120 ~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 120 AVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred cccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 3 332 45678999999988773
No 366
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.49 E-value=1.5 Score=38.63 Aligned_cols=94 Identities=16% Similarity=0.173 Sum_probs=63.8
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEe-CCcccHHHHHHcCCCEEEeCCCCCh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVAT-TSTPKVEFVKELGADKVIDYRKTKY 206 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~-~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (327)
++|++....+..++..+. -.|++|+|+|.++.+|.-.+.++... |+.+.+.- ++. +.
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~-g~tVtv~~~rT~--------------------~l 195 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAA-NATVTIAHSRTR--------------------DL 195 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhC-CCEEEEECCCCC--------------------CH
Confidence 446655445555555443 57999999999999999888888776 77776652 332 12
Q ss_pred hhhccCccEEEeCCCCchhhh-hhhcCCCcEEEeeCCC
Q 020320 207 EDIEEKFDVLYDTIGDCKNSF-VVAKDNAPIVDITWPP 243 (327)
Q Consensus 207 ~~~~~~~d~v~d~~g~~~~~~-~~l~~~g~~v~~g~~~ 243 (327)
.+..+.+|+++-++|..+..- ..+++|..++.+|...
T Consensus 196 ~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~ 233 (296)
T PRK14188 196 PAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINR 233 (296)
T ss_pred HHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcc
Confidence 334456888898888653222 3378888999998654
No 367
>PLN02214 cinnamoyl-CoA reductase
Probab=92.47 E-value=0.55 Score=42.48 Aligned_cols=73 Identities=14% Similarity=0.269 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH--HHHHHcC---CC-EEE--eCCC-CChhhhccCccEEEe
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV--EFVKELG---AD-KVI--DYRK-TKYEDIEEKFDVLYD 218 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~--~~~~~~g---~~-~v~--~~~~-~~~~~~~~~~d~v~d 218 (327)
.+++|+|+||+|-+|...+..+... |.+++++.++.++. .....+. .. ..+ |-.+ ..+...+.++|.||.
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 5678999999999999988888777 88888888765532 1122221 11 112 2111 223344578999999
Q ss_pred CCC
Q 020320 219 TIG 221 (327)
Q Consensus 219 ~~g 221 (327)
+++
T Consensus 88 ~A~ 90 (342)
T PLN02214 88 TAS 90 (342)
T ss_pred ecC
Confidence 987
No 368
>PRK07035 short chain dehydrogenase; Provisional
Probab=92.47 E-value=0.31 Score=41.76 Aligned_cols=41 Identities=22% Similarity=0.435 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
.+++++|+|++|.+|.+.++.+... |.+++.+.+++++.+.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~ 47 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQA 47 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 4678999999999999999888887 8999888887665433
No 369
>PRK09186 flagellin modification protein A; Provisional
Probab=92.47 E-value=0.31 Score=41.78 Aligned_cols=41 Identities=22% Similarity=0.389 Sum_probs=34.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
.+++++|+|++|.+|...+..+... |.+++.+.+++++.+.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~ 43 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNE 43 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHH
Confidence 5789999999999999988888877 8998888877766543
No 370
>PLN00198 anthocyanidin reductase; Provisional
Probab=92.46 E-value=0.61 Score=41.98 Aligned_cols=74 Identities=19% Similarity=0.325 Sum_probs=47.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH---HHc---CCCEEE--eCCC-CChhhhccCccEEE
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV---KEL---GADKVI--DYRK-TKYEDIEEKFDVLY 217 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~---~~~---g~~~v~--~~~~-~~~~~~~~~~d~v~ 217 (327)
..+.+|||+||+|-+|...+..+... |.++++++++..+.... ..+ +.-.++ |-.+ ........++|.+|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 34788999999999999988888877 88887777665443322 122 111122 2111 22333446799999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
.+++
T Consensus 86 h~A~ 89 (338)
T PLN00198 86 HVAT 89 (338)
T ss_pred EeCC
Confidence 8886
No 371
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=92.46 E-value=1.7 Score=35.41 Aligned_cols=95 Identities=17% Similarity=0.237 Sum_probs=58.2
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCE--EEeCCCCChhhhccCcc
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADK--VIDYRKTKYEDIEEKFD 214 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~d 214 (327)
+....+.++.+||=+| ||. |..+..+++...+.+++.++.+++..+.+++ .+... ++..+. .......+|
T Consensus 24 ~~~l~~~~~~~vLDiG-~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~--~~~~~~~~D 99 (187)
T PRK08287 24 LSKLELHRAKHLIDVG-AGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEA--PIELPGKAD 99 (187)
T ss_pred HHhcCCCCCCEEEEEC-CcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCc--hhhcCcCCC
Confidence 3456677888888887 554 6667777776535678888888887666643 44322 222111 111224689
Q ss_pred EEEeCCC--Cc----hhhhhhhcCCCcEEEe
Q 020320 215 VLYDTIG--DC----KNSFVVAKDNAPIVDI 239 (327)
Q Consensus 215 ~v~d~~g--~~----~~~~~~l~~~g~~v~~ 239 (327)
+++.... .. ..+.+.|+++|.++..
T Consensus 100 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 100 AIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred EEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 9985432 22 4567889999988663
No 372
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.46 E-value=1.5 Score=38.67 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=64.0
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..+. -.|++|.|.|.++.+|.-.+.++... |+.+.+.-+... +..
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~-gatVtv~~~~t~-------------------~l~ 197 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA-HCSVTVVHSRST-------------------DAK 197 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEECCCCC-------------------CHH
Confidence 446655445555555544 57999999996679999888888877 887766533221 234
Q ss_pred hhccCccEEEeCCCCchhh-hhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCKNS-FVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~~~-~~~l~~~g~~v~~g~~~ 243 (327)
+..+.+|+++-++|..... -..+++|..++.+|...
T Consensus 198 e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin~ 234 (301)
T PRK14194 198 ALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINR 234 (301)
T ss_pred HHHhcCCEEEEecCChhcccHhhccCCcEEEEecccc
Confidence 4456788999888865222 23478888888998654
No 373
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=92.45 E-value=0.45 Score=41.66 Aligned_cols=73 Identities=22% Similarity=0.261 Sum_probs=45.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChhhhccCccEEEeCCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELGADKV-IDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
..+++++|+| +|+.+.+++..++.. |+ ++.++-++.+|.+.+ +.++.... +.............+|++++++.
T Consensus 124 ~~~~~vlilG-AGGAarAv~~aL~~~-g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp 199 (283)
T COG0169 124 VTGKRVLILG-AGGAARAVAFALAEA-GAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATP 199 (283)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCC
Confidence 3589999999 899999999888888 75 566666877775554 44442110 10000000011115899999975
No 374
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=92.37 E-value=2.1 Score=31.65 Aligned_cols=68 Identities=29% Similarity=0.294 Sum_probs=50.1
Q ss_pred EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh----hccCccEEEeCCCC
Q 020320 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED----IEEKFDVLYDTIGD 222 (327)
Q Consensus 152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~~~~~d~v~d~~g~ 222 (327)
|+|.| .|.+|...++.++.. +.++++++.++++.+.+++.|.. ++..+..+... .+..++.++-+.+.
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~-~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEG-GIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSS
T ss_pred eEEEc-CCHHHHHHHHHHHhC-CCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCC
Confidence 67888 899999999999985 77899999999999999888854 45444443322 23578888877764
No 375
>PRK14982 acyl-ACP reductase; Provisional
Probab=92.35 E-value=0.74 Score=41.45 Aligned_cols=92 Identities=18% Similarity=0.281 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCch
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCK 224 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~ 224 (327)
-.+++|+|+||+|.+|..++..+....+. +++.+.+++++...+ ++++...+. ++...+.++|+++.+++...
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEALPEADIVVWVASMPK 227 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHHHccCCEEEECCcCCc
Confidence 46789999998899998887777533254 455555666655444 344321111 24455678999998887532
Q ss_pred h---hhhhhcCCCcEEEeeCCC
Q 020320 225 N---SFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 225 ~---~~~~l~~~g~~v~~g~~~ 243 (327)
. ....++++-.+++.+.|.
T Consensus 228 ~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 228 GVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred CCcCCHHHhCCCeEEEEecCCC
Confidence 2 114456666777776654
No 376
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=92.32 E-value=0.31 Score=43.65 Aligned_cols=41 Identities=24% Similarity=0.320 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
.+++++|+||+|++|..++..+... |.+++++.+++++.+.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~ 45 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKR-GWHVIMACRNLKKAEA 45 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHH
Confidence 4788999999999999988877777 8999888887766543
No 377
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=92.31 E-value=0.68 Score=41.17 Aligned_cols=73 Identities=18% Similarity=0.360 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH---HHHHHcC-CC---EEE--e-CCCCChhhhccCccEEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV---EFVKELG-AD---KVI--D-YRKTKYEDIEEKFDVLY 217 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~---~~~~~~g-~~---~v~--~-~~~~~~~~~~~~~d~v~ 217 (327)
.+..|+|+||+|=+|...+..+... |++|.+++|+++.. ++++++. +. .++ | .+...+.+.+.|.|.||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 5789999999999999999999988 99999999877753 3466655 21 122 1 12244555668899999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
.++.
T Consensus 84 H~As 87 (327)
T KOG1502|consen 84 HTAS 87 (327)
T ss_pred EeCc
Confidence 8765
No 378
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.31 E-value=1.6 Score=38.25 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=63.9
Q ss_pred cchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHh--hcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh
Q 020320 130 LPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKH--FYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY 206 (327)
Q Consensus 130 ~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~--~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (327)
.|++....+..++..+. -.|++++|.|.+..+|.=.+.++.. . ++.+. ++-+ +..+.
T Consensus 138 ~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~-~atVt-vchs------------------~T~~l 197 (284)
T PRK14193 138 LPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSE-NATVT-LCHT------------------GTRDL 197 (284)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccC-CCEEE-EeCC------------------CCCCH
Confidence 45555555555665554 3699999999999999888888876 3 55442 2211 12234
Q ss_pred hhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 207 EDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 207 ~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
....+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 198 ~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~ 235 (284)
T PRK14193 198 AAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSR 235 (284)
T ss_pred HHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccc
Confidence 445567899999999763 3346788999999998665
No 379
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.27 E-value=1.7 Score=37.94 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=64.1
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..++ -.|++++|.|.+..+|.=.+.++... ++.+. ++-+ ...+..
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~-~AtVt-i~hs------------------~T~~l~ 195 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNA-NATVD-ICHI------------------FTKDLK 195 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEE-EeCC------------------CCcCHH
Confidence 345554445555555554 57899999998889999888888876 76554 2222 111233
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 196 ~~~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvGin~ 232 (281)
T PRK14183 196 AHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINR 232 (281)
T ss_pred HHHhhCCEEEEecCcccccCHHHcCCCcEEEEeeccc
Confidence 34567899999999663 3446788888888998654
No 380
>PRK06172 short chain dehydrogenase; Provisional
Probab=92.26 E-value=0.33 Score=41.58 Aligned_cols=40 Identities=30% Similarity=0.434 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.+++++|+|++|.+|..++..+... |.+++++.+++++.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~ 45 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGE 45 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHH
Confidence 4689999999999999988877777 889888888776543
No 381
>PRK06197 short chain dehydrogenase; Provisional
Probab=92.26 E-value=0.29 Score=43.47 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.+++++|+||+|++|.+++..+... |.+++++.++.++.+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~ 54 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGK 54 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence 5789999999999999988877777 888888888766543
No 382
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=92.26 E-value=0.92 Score=40.48 Aligned_cols=40 Identities=23% Similarity=0.286 Sum_probs=32.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEF 189 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~ 189 (327)
+++++|+|+++++|.+++..+... | .+++.+.+++++.+.
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~-G~~~V~l~~r~~~~~~~ 43 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAAT-GEWHVIMACRDFLKAEQ 43 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc-CCCEEEEEeCCHHHHHH
Confidence 578999999999999988777767 8 888888887765543
No 383
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=92.25 E-value=0.8 Score=41.09 Aligned_cols=104 Identities=18% Similarity=0.231 Sum_probs=68.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc---
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAK-HFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--- 223 (327)
.|+++.|+| .|.+|...++.++ .+ |.++++..+... .+....++... .++.+.+...|+++-+....
T Consensus 144 ~gktvGIiG-~G~IG~~va~~l~~~f-gm~V~~~~~~~~-~~~~~~~~~~~------~~l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVG-MGRIGMALAQRAHFGF-NMPILYNARRHH-KEAEERFNARY------CDLDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHhcC-CCEEEEECCCCc-hhhHHhcCcEe------cCHHHHHHhCCEEEEeCCCChHH
Confidence 578999999 9999999999998 76 998887765432 22223344321 13555667889988776521
Q ss_pred -----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 224 -----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 224 -----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
...+..|+++..++.++-... ++ -+.+++.+++|++.
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~aRG~v----------Vd---e~AL~~AL~~g~i~ 256 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAGRGPV----------VD---ENALIAALQKGEIH 256 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCee
Confidence 446778888888877753221 11 23556677777775
No 384
>PRK06932 glycerate dehydrogenase; Provisional
Probab=92.24 E-value=0.69 Score=41.35 Aligned_cols=100 Identities=22% Similarity=0.279 Sum_probs=69.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|+++.|+| .|.+|..++++++.+ |.++++..+.... .... .-.++.+.+...|+++-+....
T Consensus 146 ~gktvgIiG-~G~IG~~va~~l~~f-g~~V~~~~~~~~~-----~~~~------~~~~l~ell~~sDiv~l~~Plt~~T~ 212 (314)
T PRK06932 146 RGSTLGVFG-KGCLGTEVGRLAQAL-GMKVLYAEHKGAS-----VCRE------GYTPFEEVLKQADIVTLHCPLTETTQ 212 (314)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhcC-CCEEEEECCCccc-----cccc------ccCCHHHHHHhCCEEEEcCCCChHHh
Confidence 478999999 999999999999998 9998877643211 0110 1123555667889998777521
Q ss_pred ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
...+..|+++..++.++-... ++ -..+.+.+++|++.
T Consensus 213 ~li~~~~l~~mk~ga~lIN~aRG~~----------Vd---e~AL~~aL~~g~i~ 253 (314)
T PRK06932 213 NLINAETLALMKPTAFLINTGRGPL----------VD---EQALLDALENGKIA 253 (314)
T ss_pred cccCHHHHHhCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCcc
Confidence 456788899998888864331 11 24567778888886
No 385
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.24 E-value=0.85 Score=38.86 Aligned_cols=39 Identities=18% Similarity=0.318 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKV 187 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~ 187 (327)
.+.+++|+||+|.+|..++..+... |.++++. .++.++.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~-g~~v~~~~~r~~~~~ 42 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEE-GYDIAVNYARSRKAA 42 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHH
Confidence 4679999999999999988888877 8887764 4555443
No 386
>PLN03075 nicotianamine synthase; Provisional
Probab=92.17 E-value=1.1 Score=39.52 Aligned_cols=93 Identities=16% Similarity=0.168 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhh-cCCcEEEEeCCcccHHHHHHc-----CCCEEEeCCCCChh---hhccCccEEE
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHF-YGASHVVATTSTPKVEFVKEL-----GADKVIDYRKTKYE---DIEEKFDVLY 217 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~-~g~~~v~~~~~~~~~~~~~~~-----g~~~v~~~~~~~~~---~~~~~~d~v~ 217 (327)
.+.++|+-+| +|+.++.++.+++.+ .+.+++.++.+++..+.+++. |...-+.....+.. ...+++|+||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF 200 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF 200 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence 3779999999 999999888887655 245677888888877777543 21121111111111 1236799999
Q ss_pred eCC--C----C----chhhhhhhcCCCcEEEee
Q 020320 218 DTI--G----D----CKNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 218 d~~--g----~----~~~~~~~l~~~g~~v~~g 240 (327)
-.+ + . .....+.|++||.++...
T Consensus 201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 554 1 1 155678899999987664
No 387
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=92.14 E-value=0.34 Score=41.54 Aligned_cols=40 Identities=28% Similarity=0.555 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.++++||+||+|.+|.+++..+... |.++++..+++++..
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~ 47 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAE 47 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHH
Confidence 4689999999999999988888877 899988888766543
No 388
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=92.11 E-value=1.2 Score=37.83 Aligned_cols=73 Identities=25% Similarity=0.474 Sum_probs=45.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC-Ccc-cHHHHH---HcCCCEEE-eCCCCChhh----------hcc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT-STP-KVEFVK---ELGADKVI-DYRKTKYED----------IEE 211 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~-~~~-~~~~~~---~~g~~~v~-~~~~~~~~~----------~~~ 211 (327)
.+++++|+|++|.+|..+++.+... |.++++..+ ++. ..+.++ ..+..... ..+-.+..+ ...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKD-GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 3678999999999999998888887 888777553 222 222333 33443321 111122111 114
Q ss_pred CccEEEeCCC
Q 020320 212 KFDVLYDTIG 221 (327)
Q Consensus 212 ~~d~v~d~~g 221 (327)
++|+++.+.|
T Consensus 81 ~id~li~~ag 90 (246)
T PRK12938 81 EIDVLVNNAG 90 (246)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 389
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=92.11 E-value=1.4 Score=38.48 Aligned_cols=89 Identities=15% Similarity=0.242 Sum_probs=54.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH-HHHHcC---CCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE-FVKELG---ADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~-~~~~~g---~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
...+++++|+| +|++|.+++..+... |.++.+..+++++.+ +++++. ........+ .....+|+++++++
T Consensus 114 ~~~~k~vliiG-aGg~g~aia~~L~~~-g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~~~~DivInatp 187 (270)
T TIGR00507 114 LRPNQRVLIIG-AGGAARAVALPLLKA-DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE----LPLHRVDLIINATS 187 (270)
T ss_pred CccCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh----hcccCccEEEECCC
Confidence 34578999999 689999988888777 787777777766543 334433 212221111 12246899999986
Q ss_pred Cc-----h---hhhhhhcCCCcEEEee
Q 020320 222 DC-----K---NSFVVAKDNAPIVDIT 240 (327)
Q Consensus 222 ~~-----~---~~~~~l~~~g~~v~~g 240 (327)
.. . .....++++..++.+.
T Consensus 188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~ 214 (270)
T TIGR00507 188 AGMSGNIDEPPVPAEKLKEGMVVYDMV 214 (270)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence 32 1 1123455665665553
No 390
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=92.09 E-value=1 Score=40.88 Aligned_cols=74 Identities=12% Similarity=0.242 Sum_probs=47.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHc--CCC-EEEeCCC---CChhhhccCccEEEeC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KEL--GAD-KVIDYRK---TKYEDIEEKFDVLYDT 219 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~--g~~-~v~~~~~---~~~~~~~~~~d~v~d~ 219 (327)
..+.+|||+||+|-+|..+++.+... |.+++++.++..+...+ ..+ +.. ..+..+- ..+.....++|.|+.+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 45779999999999999998888877 88888887765543322 222 111 1121111 1223334678999988
Q ss_pred CC
Q 020320 220 IG 221 (327)
Q Consensus 220 ~g 221 (327)
++
T Consensus 87 A~ 88 (353)
T PLN02896 87 AA 88 (353)
T ss_pred Cc
Confidence 76
No 391
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=92.08 E-value=0.49 Score=41.74 Aligned_cols=73 Identities=18% Similarity=0.260 Sum_probs=44.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCc---ccH-HHHHHcC---CC-EE--EeCCC-CChhhhccCcc
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTST---PKV-EFVKELG---AD-KV--IDYRK-TKYEDIEEKFD 214 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~---~~~-~~~~~~g---~~-~v--~~~~~-~~~~~~~~~~d 214 (327)
..+++++|+| +|++|.+++..+... |++ +++..+++ ++. ++++++. .. .+ .+..+ .........+|
T Consensus 124 ~~~k~vlI~G-AGGagrAia~~La~~-G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D 201 (289)
T PRK12548 124 VKGKKLTVIG-AGGAATAIQVQCALD-GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD 201 (289)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence 3578999999 589999988877777 876 66666765 333 3334342 11 11 12211 12222345689
Q ss_pred EEEeCCC
Q 020320 215 VLYDTIG 221 (327)
Q Consensus 215 ~v~d~~g 221 (327)
++++++.
T Consensus 202 ilINaTp 208 (289)
T PRK12548 202 ILVNATL 208 (289)
T ss_pred EEEEeCC
Confidence 9999874
No 392
>PLN02650 dihydroflavonol-4-reductase
Probab=92.06 E-value=0.67 Score=41.98 Aligned_cols=73 Identities=18% Similarity=0.277 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc----CC--C-EEE--eCCC-CChhhhccCccEEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL----GA--D-KVI--DYRK-TKYEDIEEKFDVLY 217 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~----g~--~-~v~--~~~~-~~~~~~~~~~d~v~ 217 (327)
..++|||+||+|-+|...+..+... |.++++++++.++......+ +. . ..+ |-.+ ..+.....++|.||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHC-CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 4578999999999999988888877 88888888765544332221 11 1 112 2111 23334456789999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
.+++
T Consensus 83 H~A~ 86 (351)
T PLN02650 83 HVAT 86 (351)
T ss_pred EeCC
Confidence 8775
No 393
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=92.04 E-value=1.2 Score=38.04 Aligned_cols=108 Identities=20% Similarity=0.351 Sum_probs=69.5
Q ss_pred HHHHHHHH--HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH----cCCCEEEeCCCCCh
Q 020320 133 AVQTAIEG--FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE----LGADKVIDYRKTKY 206 (327)
Q Consensus 133 ~~~ta~~~--l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~ 206 (327)
..-..|.- +...+..+|++||=++ ++.|-.+..+++..+..++++++-|+..++.+++ .|... +.....+.
T Consensus 34 g~~~~Wr~~~i~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dA 110 (238)
T COG2226 34 GLHRLWRRALISLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDA 110 (238)
T ss_pred cchHHHHHHHHHhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEech
Confidence 33445653 2456666899998774 6678899999998855678888889998887754 23221 11111111
Q ss_pred hhh---ccCccEEEeCCC-----C----chhhhhhhcCCCcEEEeeCCC
Q 020320 207 EDI---EEKFDVLYDTIG-----D----CKNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 207 ~~~---~~~~d~v~d~~g-----~----~~~~~~~l~~~g~~v~~g~~~ 243 (327)
... -..+|++.-+.| . +..+.+.|+|+|+++......
T Consensus 111 e~LPf~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 111 ENLPFPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred hhCCCCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 111 135788877766 1 256678999999988876543
No 394
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=92.03 E-value=0.67 Score=46.03 Aligned_cols=76 Identities=14% Similarity=0.036 Sum_probs=47.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc-CCCEEE-eCCCC-C-hhhhccCccEEEeCCC
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL-GADKVI-DYRKT-K-YEDIEEKFDVLYDTIG 221 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~-g~~~v~-~~~~~-~-~~~~~~~~d~v~d~~g 221 (327)
.+++.+|||+||+|-+|...++.+...+|.+++++++.+......... +.+.+. |-.+. . ....+.++|+||.+++
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa 391 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVA 391 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECcc
Confidence 467889999999999999998877764368888888765433221111 222221 11111 1 1233468999998775
No 395
>PRK05650 short chain dehydrogenase; Provisional
Probab=92.02 E-value=1.1 Score=38.72 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=45.2
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhh---h-------ccCccE
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYED---I-------EEKFDV 215 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~---~-------~~~~d~ 215 (327)
+++|+|++|.+|...+..+... |.+++++.+++++.+.+ +..+.+.. +..+-.+..+ . ..++|.
T Consensus 2 ~vlVtGasggIG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWARE-GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899999999999988777777 99988888876654432 22333322 2111111111 1 146899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.+.|
T Consensus 81 lI~~ag 86 (270)
T PRK05650 81 IVNNAG 86 (270)
T ss_pred EEECCC
Confidence 999987
No 396
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.99 E-value=0.88 Score=42.83 Aligned_cols=73 Identities=18% Similarity=0.378 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc---HHHHHHcCCCEE-EeCCCCCh-hhh-------ccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK---VEFVKELGADKV-IDYRKTKY-EDI-------EEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~---~~~~~~~g~~~v-~~~~~~~~-~~~-------~~~~d~ 215 (327)
++++++|+|++|++|.++++.+... |++++++.++... .+..++++...+ +|-.+... ... ..++|.
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~-Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARD-GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 5789999999999999999888877 9998887764322 223345554432 23222111 111 136899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++++.|
T Consensus 288 vi~~AG 293 (450)
T PRK08261 288 VVHNAG 293 (450)
T ss_pred EEECCC
Confidence 999987
No 397
>PRK06101 short chain dehydrogenase; Provisional
Probab=91.99 E-value=0.34 Score=41.23 Aligned_cols=42 Identities=12% Similarity=0.236 Sum_probs=34.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE 192 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~ 192 (327)
.+++|+||+|++|...+..+... |.+++++.+++++.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~ 43 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHT 43 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH
Confidence 57899999999999877777777 9999988888777665544
No 398
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.97 E-value=0.79 Score=43.59 Aligned_cols=69 Identities=20% Similarity=0.270 Sum_probs=47.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-----cHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-----KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
..+++|+|+| .|.+|+.++.+++.. |.++.+.+.++. ..+.+++.|.+........ ....+|+|+-+.|
T Consensus 14 ~~~~~v~viG-~G~~G~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAG-LGVSGFAAADALLEL-GARVTVVDDGDDERHRALAAILEALGATVRLGPGPT----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----ccCCCCEEEECCC
Confidence 3567999999 899999999999988 988888775442 1234556676544332211 2346888988887
No 399
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=91.96 E-value=1.7 Score=39.20 Aligned_cols=94 Identities=19% Similarity=0.264 Sum_probs=63.9
Q ss_pred cchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320 130 LPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED 208 (327)
Q Consensus 130 ~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 208 (327)
+|++....+..++..++ -.|++++|+|.+..+|.=...++... ++.+.+.- .+..+...
T Consensus 211 ~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~-~ATVTicH-------------------s~T~nl~~ 270 (364)
T PLN02616 211 VPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVH-------------------SRTKNPEE 270 (364)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHC-CCeEEEeC-------------------CCCCCHHH
Confidence 45554444444554443 47899999999999998888888776 66554321 22233444
Q ss_pred hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
..+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 271 ~~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~ 306 (364)
T PLN02616 271 ITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINP 306 (364)
T ss_pred HHhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccc
Confidence 5577999999999764 3446789999999998755
No 400
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=91.92 E-value=0.4 Score=40.89 Aligned_cols=41 Identities=17% Similarity=0.344 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~ 187 (327)
..++++++|+|++|.+|...++.+... |.+++++.++.++.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~-G~~Vi~~~r~~~~~ 49 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARH-GATVILLGRTEEKL 49 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC-CCcEEEEeCCHHHH
Confidence 457889999999999999988888777 88999888876654
No 401
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=91.91 E-value=0.68 Score=35.33 Aligned_cols=86 Identities=22% Similarity=0.370 Sum_probs=52.2
Q ss_pred EEEEcCCchHHHHHHHHHHhhcC-CcEEEEeC--Cccc-HHHHHHcCCCEEEeCCCCChhh---h---------------
Q 020320 152 IFIVGGAGGVGTLVIQLAKHFYG-ASHVVATT--STPK-VEFVKELGADKVIDYRKTKYED---I--------------- 209 (327)
Q Consensus 152 vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~--~~~~-~~~~~~~g~~~v~~~~~~~~~~---~--------------- 209 (327)
|.|+|++|.+|..+..+.+.... .+++.... +-++ .+.++++.+..+.-.++..... .
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 57999999999999999998832 45665553 3222 3455778887766544322111 0
Q ss_pred -----c--cCccEEEeCC-C--CchhhhhhhcCCCcEE
Q 020320 210 -----E--EKFDVLYDTI-G--DCKNSFVVAKDNAPIV 237 (327)
Q Consensus 210 -----~--~~~d~v~d~~-g--~~~~~~~~l~~~g~~v 237 (327)
. ..+|+++.+. | ++...+.+++.+-++.
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia 118 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA 118 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence 0 3589998875 5 3466777777665543
No 402
>PRK07340 ornithine cyclodeaminase; Validated
Probab=91.90 E-value=1.8 Score=38.50 Aligned_cols=96 Identities=13% Similarity=0.062 Sum_probs=60.9
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHH-HHHHcCCC--EEEeCCCCChhhhccCccEEE
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVE-FVKELGAD--KVIDYRKTKYEDIEEKFDVLY 217 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~-~~~~~g~~--~v~~~~~~~~~~~~~~~d~v~ 217 (327)
+........+++|+| +|..|.+.+..+....+.+ +.+..+++++.+ +++++... .+. ..+..+...++|+|+
T Consensus 118 ~~La~~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~---~~~~~~av~~aDiVi 193 (304)
T PRK07340 118 RTLAPAPPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE---PLDGEAIPEAVDLVV 193 (304)
T ss_pred HHhCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE---ECCHHHHhhcCCEEE
Confidence 333345678999999 8999998888776543655 445556766543 44555321 111 133444567999999
Q ss_pred eCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320 218 DTIGDC---KNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 218 d~~g~~---~~~~~~l~~~g~~v~~g~~~ 243 (327)
.++.+. ... .++++-.+..+|...
T Consensus 194 taT~s~~Pl~~~--~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 194 TATTSRTPVYPE--AARAGRLVVAVGAFT 220 (304)
T ss_pred EccCCCCceeCc--cCCCCCEEEecCCCC
Confidence 998743 222 368888888888654
No 403
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=91.85 E-value=1.8 Score=38.90 Aligned_cols=95 Identities=18% Similarity=0.193 Sum_probs=64.6
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..++ -.|++++|.|.+..+|.=.+.++... ++.+.+.-. +..+..
T Consensus 193 ~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~-~ATVTicHs-------------------~T~nl~ 252 (345)
T PLN02897 193 FVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRH-DATVSTVHA-------------------FTKDPE 252 (345)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHC-CCEEEEEcC-------------------CCCCHH
Confidence 345554444444554443 47899999999999998888888876 765533221 122334
Q ss_pred hhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 253 ~~~~~ADIvIsAvGkp~~v~~d~vk~GavVIDVGin~ 289 (345)
T PLN02897 253 QITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTP 289 (345)
T ss_pred HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccc
Confidence 45567899999999763 3446789999999998755
No 404
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.84 E-value=1.1 Score=38.50 Aligned_cols=73 Identities=22% Similarity=0.305 Sum_probs=45.0
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHhhcCCcEEEEeCCc--ccH-HHHHHcCCC-EEEeCCCCChhh----------hcc
Q 020320 148 TGQTIFIVGG--AGGVGTLVIQLAKHFYGASHVVATTST--PKV-EFVKELGAD-KVIDYRKTKYED----------IEE 211 (327)
Q Consensus 148 ~~~~vlI~ga--~g~~G~~a~~la~~~~g~~~v~~~~~~--~~~-~~~~~~g~~-~v~~~~~~~~~~----------~~~ 211 (327)
.+++++|+|+ ++++|.+++..+... |+++++..++. +.. +..++++.. ..+..+-.+..+ ...
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQ-GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHC-CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 799999988877777 89888877543 222 233444421 122111111111 124
Q ss_pred CccEEEeCCC
Q 020320 212 KFDVLYDTIG 221 (327)
Q Consensus 212 ~~d~v~d~~g 221 (327)
++|++++++|
T Consensus 85 ~iD~li~nAG 94 (256)
T PRK07889 85 GLDGVVHSIG 94 (256)
T ss_pred CCcEEEEccc
Confidence 6899998876
No 405
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=91.81 E-value=0.39 Score=41.28 Aligned_cols=73 Identities=22% Similarity=0.415 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEE-EeCCCCChh---hh-------ccCccE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKV-IDYRKTKYE---DI-------EEKFDV 215 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~---~~-------~~~~d~ 215 (327)
.+++++|+|++|.+|..++..+... |.+++.+.++.++.+.+ ++++.... +..+-.+.. .. ...+|.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678999999999999998888877 99999888877765443 33442211 211111111 11 136899
Q ss_pred EEeCCC
Q 020320 216 LYDTIG 221 (327)
Q Consensus 216 v~d~~g 221 (327)
++.+.|
T Consensus 84 li~~ag 89 (257)
T PRK07067 84 LFNNAA 89 (257)
T ss_pred EEECCC
Confidence 998876
No 406
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.78 E-value=2.2 Score=37.28 Aligned_cols=94 Identities=18% Similarity=0.224 Sum_probs=64.0
Q ss_pred cchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhh
Q 020320 130 LPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYED 208 (327)
Q Consensus 130 ~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 208 (327)
+|++....+..++..++ -.|++++|.|.+..+|.=...++... ++.+.+.- ++..+...
T Consensus 137 ~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~AtVtich-------------------s~T~nl~~ 196 (282)
T PRK14182 137 RPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLER-HATVTIAH-------------------SRTADLAG 196 (282)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeC-------------------CCCCCHHH
Confidence 45554445555555443 47999999999999999988888876 76544321 11223344
Q ss_pred hccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 209 IEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 209 ~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
..+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus 197 ~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~ 232 (282)
T PRK14182 197 EVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNR 232 (282)
T ss_pred HHhhCCEEEEecCCcCccCHHHcCCCCEEEEeecee
Confidence 4567899999999663 3346778888899998654
No 407
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.77 E-value=1 Score=38.19 Aligned_cols=39 Identities=26% Similarity=0.525 Sum_probs=31.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKVE 188 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~~ 188 (327)
+++++|+|++|.+|...+..+... |.+++++ .+++++.+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~ 44 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQ 44 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHH
Confidence 568999999999999988877767 8888888 66665543
No 408
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=91.77 E-value=1.2 Score=40.03 Aligned_cols=102 Identities=19% Similarity=0.210 Sum_probs=68.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|.+|.|+| .|.+|...+..++.. |.++++.++++..... . .. ...++.+.....|+++-++...
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~~~-G~~V~~~d~~~~~~~~---~-~~-----~~~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYAGF-GATITAYDAYPNKDLD---F-LT-----YKDSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCChhHhhh---h-hh-----ccCCHHHHHhcCCEEEEeCCCcHHHH
Confidence 577899999 999999999999987 9999988876543211 0 00 1123455667899999887632
Q ss_pred ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
...+..++++..++..+-... + +-..+++.+.+|++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aRG~~----------v---d~~aL~~aL~~g~i~ 254 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAARGAV----------I---NTPDLIAAVNDGTLL 254 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCCccc----------c---CHHHHHHHHHcCCee
Confidence 234566777777776653221 1 134567788888875
No 409
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=91.77 E-value=1.4 Score=37.36 Aligned_cols=37 Identities=22% Similarity=0.426 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~ 185 (327)
.+++++|+|++|.+|...+..+... |.++++..+++.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~-G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQ-GANVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCch
Confidence 4578999999999999999888877 888877776544
No 410
>PRK06701 short chain dehydrogenase; Provisional
Probab=91.75 E-value=1.2 Score=39.26 Aligned_cols=37 Identities=27% Similarity=0.419 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~ 184 (327)
-.++++||+||+|.+|..++..+... |.+++++.+++
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~-G~~V~l~~r~~ 80 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKE-GADIAIVYLDE 80 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 45789999999999999988877777 89888887654
No 411
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=91.73 E-value=1 Score=43.31 Aligned_cols=83 Identities=22% Similarity=0.305 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|+++.|+| .|.+|...+..++.+ |.++++.++... .+...++|...+ ++.+.+...|+++-++...
T Consensus 139 ~gktvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~-~~~~~~~g~~~~------~l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIG-LGRIGSEVAKRAKAF-GMKVIAYDPYIS-PERAAQLGVELV------SLDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCC-hhHHHhcCCEEE------cHHHHHhhCCEEEEccCCChHhh
Confidence 488999999 999999999999988 999988886432 223334444322 2333445566666555421
Q ss_pred ----hhhhhhhcCCCcEEEe
Q 020320 224 ----KNSFVVAKDNAPIVDI 239 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~ 239 (327)
...+..++++..++.+
T Consensus 210 ~li~~~~l~~mk~ga~lIN~ 229 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINC 229 (526)
T ss_pred cCcCHHHHhcCCCCeEEEEC
Confidence 2334455555555544
No 412
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=91.69 E-value=0.43 Score=40.84 Aligned_cols=41 Identities=22% Similarity=0.340 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEF 189 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~ 189 (327)
.+++++|+|++|.+|..++..+... |.+++++.+++++.+.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~ 43 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAA 43 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHH
Confidence 4679999999999999988888777 8999988887765443
No 413
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=91.69 E-value=1.4 Score=40.31 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCchHHHH--HHHHHHhhcCCcEEEEeC
Q 020320 147 KTGQTIFIVGGAGGVGTL--VIQLAKHFYGASHVVATT 182 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~--a~~la~~~~g~~~v~~~~ 182 (327)
..++++||+|+++++|++ +++.+ .. |+.++++..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~-GA~Vi~v~~ 74 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GA-GADTLGVFF 74 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-Hc-CCeEEEEec
Confidence 456899999999999999 45555 55 898887763
No 414
>PRK12937 short chain dehydrogenase; Provisional
Probab=91.66 E-value=1.4 Score=37.42 Aligned_cols=35 Identities=14% Similarity=0.287 Sum_probs=29.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS 183 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~ 183 (327)
++++++|+|++|.+|...+..+... |.+++++.++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~-g~~v~~~~~~ 38 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAAD-GFAVAVNYAG 38 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCC
Confidence 5689999999999999988888877 8887776654
No 415
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=91.65 E-value=1.6 Score=38.43 Aligned_cols=72 Identities=17% Similarity=0.273 Sum_probs=41.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcc---c-HHHHHHcCCC----EEEeCCCC--ChhhhccCccEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTP---K-VEFVKELGAD----KVIDYRKT--KYEDIEEKFDVL 216 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~---~-~~~~~~~g~~----~v~~~~~~--~~~~~~~~~d~v 216 (327)
.+++++|+| +|+.+.+++..+..+ |++ +.++.++++ + .+++++++.. ..+...+. .+.+....+|++
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~~-g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv 200 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAIE-GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 200 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence 567999999 788888877766666 764 555557643 3 3334444321 11111111 122234578999
Q ss_pred EeCCC
Q 020320 217 YDTIG 221 (327)
Q Consensus 217 ~d~~g 221 (327)
++++.
T Consensus 201 INaTp 205 (288)
T PRK12749 201 TNGTK 205 (288)
T ss_pred EECCC
Confidence 99874
No 416
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=91.64 E-value=1.2 Score=39.91 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=45.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHH-HHHcCC-CE-EE--eCCC-CChhhhccCccEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEF-VKELGA-DK-VI--DYRK-TKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~-~~~~g~-~~-v~--~~~~-~~~~~~~~~~d~v~d~~ 220 (327)
.++++||+||+|.+|...+..+...+ +.++++..+++.+... .+.+.. .. .+ |-.+ ..+.+...++|++|.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 46889999999999999888777662 2566666665544322 233321 11 12 2121 12233346799999987
Q ss_pred C
Q 020320 221 G 221 (327)
Q Consensus 221 g 221 (327)
|
T Consensus 83 g 83 (324)
T TIGR03589 83 A 83 (324)
T ss_pred c
Confidence 6
No 417
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=91.56 E-value=0.46 Score=40.78 Aligned_cols=40 Identities=25% Similarity=0.398 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.+++++|+|++|.+|..++..+... |++++++.+++++.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~ 49 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLE 49 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHH
Confidence 5789999999999999988877777 899988888766543
No 418
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=91.54 E-value=0.75 Score=45.24 Aligned_cols=88 Identities=19% Similarity=0.221 Sum_probs=62.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCCh--hh--hccCccEEEeCCCCch
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKY--ED--IEEKFDVLYDTIGDCK 224 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~--~~~~~d~v~d~~g~~~ 224 (327)
.++|+|.| .|.+|+..++.++.. |.++++++.++++.+.+++.|... +..+..+. -+ ...+++.++-+++..+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~~g~~v-~~GDat~~~~L~~agi~~A~~vvv~~~d~~ 476 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSS-GVKMTVLDHDPDHIETLRKFGMKV-FYGDATRMDLLESAGAAKAEVLINAIDDPQ 476 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHhcCCeE-EEEeCCCHHHHHhcCCCcCCEEEEEeCCHH
Confidence 46899999 999999999999988 999999999999999999888654 43333332 22 2357899998887531
Q ss_pred ------hhhhhhcCCCcEEEe
Q 020320 225 ------NSFVVAKDNAPIVDI 239 (327)
Q Consensus 225 ------~~~~~l~~~g~~v~~ 239 (327)
...+.+.|.-+++..
T Consensus 477 ~n~~i~~~ar~~~p~~~iiaR 497 (621)
T PRK03562 477 TSLQLVELVKEHFPHLQIIAR 497 (621)
T ss_pred HHHHHHHHHHHhCCCCeEEEE
Confidence 223444555555543
No 419
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=91.47 E-value=1.2 Score=39.21 Aligned_cols=73 Identities=27% Similarity=0.423 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCchHHHH-HHHHHHhhcCCcEEEEeCCcccHHHHH-----HcCC---CEEEeCCCCC--hhh---hcc-
Q 020320 147 KTGQTIFIVGGAGGVGTL-VIQLAKHFYGASHVVATTSTPKVEFVK-----ELGA---DKVIDYRKTK--YED---IEE- 211 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~-a~~la~~~~g~~~v~~~~~~~~~~~~~-----~~g~---~~v~~~~~~~--~~~---~~~- 211 (327)
+-|++.+|+||+.++|.+ +-++|+ . |.+++.+.|+++|++..+ +.+. .+++|....+ +.. .+.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-r-G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~ 124 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-R-GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG 124 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-c-CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence 457999999999999987 677777 5 999999999999886662 3442 2245665555 322 233
Q ss_pred -CccEEEeCCC
Q 020320 212 -KFDVLYDTIG 221 (327)
Q Consensus 212 -~~d~v~d~~g 221 (327)
.+-++++++|
T Consensus 125 ~~VgILVNNvG 135 (312)
T KOG1014|consen 125 LDVGILVNNVG 135 (312)
T ss_pred CceEEEEeccc
Confidence 3566779988
No 420
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=91.45 E-value=1.8 Score=37.11 Aligned_cols=95 Identities=13% Similarity=0.157 Sum_probs=59.9
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCC-CEEEeCCCCChhhhccCccEEEeCC
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGA-DKVIDYRKTKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~d~v~d~~ 220 (327)
......++.+||-+| ||. |..+..+++ . +.+++.++.+++..+.+++... ...+..+..........+|+|+...
T Consensus 36 ~~l~~~~~~~vLDiG-cG~-G~~~~~l~~-~-~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~~~~~~fD~V~s~~ 111 (251)
T PRK10258 36 AMLPQRKFTHVLDAG-CGP-GWMSRYWRE-R-GSQVTALDLSPPMLAQARQKDAADHYLAGDIESLPLATATFDLAWSNL 111 (251)
T ss_pred HhcCccCCCeEEEee-CCC-CHHHHHHHH-c-CCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCcCCCCcEEEEEECc
Confidence 334445678899998 776 666666665 4 7889999999988888876432 2222222111111123589998654
Q ss_pred C-----C----chhhhhhhcCCCcEEEee
Q 020320 221 G-----D----CKNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 221 g-----~----~~~~~~~l~~~g~~v~~g 240 (327)
. . +..+.+.|+++|.++...
T Consensus 112 ~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~ 140 (251)
T PRK10258 112 AVQWCGNLSTALRELYRVVRPGGVVAFTT 140 (251)
T ss_pred hhhhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 3 1 245668899999988764
No 421
>PRK08655 prephenate dehydrogenase; Provisional
Probab=91.43 E-value=1.1 Score=42.01 Aligned_cols=65 Identities=28% Similarity=0.430 Sum_probs=43.1
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
+|.|+||+|.+|.+.+..++.. |..+++..+++++. +.+.++|.... .+.......+|+++-++.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~~gv~~~-----~~~~e~~~~aDvVIlavp 67 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKELGVEYA-----NDNIDAAKDADIVIISVP 67 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHcCCeec-----cCHHHHhccCCEEEEecC
Confidence 6889987899999998888887 88888888777663 55566665211 112223345566665554
No 422
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.43 E-value=2.1 Score=37.42 Aligned_cols=95 Identities=16% Similarity=0.176 Sum_probs=64.5
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
+.|++....+..++..+. -.|.+++|+|.+..+|.-.+.++... ++.+.+..... .+..
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~-~atVtv~hs~t-------------------~~L~ 190 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNA-DATVTICHSKT-------------------ENLK 190 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhC-CCeeEEEecCh-------------------hHHH
Confidence 345555445555555443 47899999998779999988888877 77666554332 2234
Q ss_pred hhccCccEEEeCCCCc-hhhhhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDC-KNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~-~~~~~~l~~~g~~v~~g~~~ 243 (327)
+..+.+|+++.++|.. .-.-..++++..++.+|...
T Consensus 191 ~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~ 227 (279)
T PRK14178 191 AELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQ 227 (279)
T ss_pred HHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccc
Confidence 4456789999999854 22234579999999998654
No 423
>PRK09242 tropinone reductase; Provisional
Probab=91.42 E-value=0.47 Score=40.77 Aligned_cols=42 Identities=21% Similarity=0.377 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
.+++++|+|++|.+|...+..+... |.+++++.+++++.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~ 49 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQA 49 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999998888877 89988888877655433
No 424
>PLN00203 glutamyl-tRNA reductase
Probab=91.42 E-value=0.81 Score=43.80 Aligned_cols=73 Identities=19% Similarity=0.314 Sum_probs=49.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCC-cEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGA-SHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~-~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 223 (327)
+.+|+|+| +|.+|.+++..+... |. +++++.++.++.+.+ .+++...+....-.+.......+|+||.++++.
T Consensus 266 ~kkVlVIG-AG~mG~~~a~~L~~~-G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~ 340 (519)
T PLN00203 266 SARVLVIG-AGKMGKLLVKHLVSK-GCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSE 340 (519)
T ss_pred CCEEEEEe-CHHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCC
Confidence 68999999 799999999888887 76 566666887775544 455421111111123344557899999998743
No 425
>PRK06436 glycerate dehydrogenase; Provisional
Probab=91.41 E-value=1.2 Score=39.62 Aligned_cols=81 Identities=25% Similarity=0.327 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|+++.|+| .|.+|...++.++.+ |.++++..++... .+.... ..++.+.+...|+++.+....
T Consensus 121 ~gktvgIiG-~G~IG~~vA~~l~af-G~~V~~~~r~~~~------~~~~~~----~~~l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILG-YGGIGRRVALLAKAF-GMNIYAYTRSYVN------DGISSI----YMEPEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcc------cCcccc----cCCHHHHHhhCCEEEECCCCCchhh
Confidence 589999999 999999999999988 9999988875321 122111 123445556788888777521
Q ss_pred ----hhhhhhhcCCCcEEEee
Q 020320 224 ----KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g 240 (327)
...+..++++..++.++
T Consensus 189 ~li~~~~l~~mk~ga~lIN~s 209 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVA 209 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECC
Confidence 34566777777777665
No 426
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=91.41 E-value=1.9 Score=36.17 Aligned_cols=96 Identities=17% Similarity=0.257 Sum_probs=62.3
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHH----HcCCCEEEeCCC-CChhhh-----cc
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVK----ELGADKVIDYRK-TKYEDI-----EE 211 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~-~~~~~~-----~~ 211 (327)
.++.+..+++|=+| +.+|..++.+|..+. ..+.+.+..++++.+.++ +.|.+..+.-.. .+..+. ..
T Consensus 54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~ 131 (219)
T COG4122 54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDG 131 (219)
T ss_pred HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCC
Confidence 34556778898887 677888999999885 245556668888877774 466555321111 122221 24
Q ss_pred CccEEE-eCCCC-----chhhhhhhcCCCcEEEee
Q 020320 212 KFDVLY-DTIGD-----CKNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 212 ~~d~v~-d~~g~-----~~~~~~~l~~~g~~v~~g 240 (327)
.+|++| |+.=. .+..+..|++||.++.=.
T Consensus 132 ~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 132 SFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred CccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 689998 55422 266788999999887543
No 427
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=91.37 E-value=6.4 Score=33.08 Aligned_cols=85 Identities=14% Similarity=0.273 Sum_probs=55.0
Q ss_pred EEEEEcCCchHHHHHHHHHHhh-cCCcEEEE-eCCcccHHHHH-HcCCCEEEeCCCCChhhhccCccEEEeCCCC--c-h
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHF-YGASHVVA-TTSTPKVEFVK-ELGADKVIDYRKTKYEDIEEKFDVLYDTIGD--C-K 224 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~-~g~~~v~~-~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~--~-~ 224 (327)
+|.+.| +|.+|...+.+.+.- ...+.+++ +++.++...+. .++...+ .+..+.+..+|++++|.+. . +
T Consensus 2 ~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~-----s~ide~~~~~DlvVEaAS~~Av~e 75 (255)
T COG1712 2 KVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCV-----SDIDELIAEVDLVVEAASPEAVRE 75 (255)
T ss_pred eEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCcc-----ccHHHHhhccceeeeeCCHHHHHH
Confidence 477888 999999999988841 02444444 46666665554 4443322 2233344789999999883 2 5
Q ss_pred hhhhhhcCCCcEEEeeC
Q 020320 225 NSFVVAKDNAPIVDITW 241 (327)
Q Consensus 225 ~~~~~l~~~g~~v~~g~ 241 (327)
...+.|+.+--++.++.
T Consensus 76 ~~~~~L~~g~d~iV~SV 92 (255)
T COG1712 76 YVPKILKAGIDVIVMSV 92 (255)
T ss_pred HhHHHHhcCCCEEEEec
Confidence 66677877777766654
No 428
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=91.35 E-value=0.7 Score=44.88 Aligned_cols=71 Identities=27% Similarity=0.258 Sum_probs=53.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh--h--hccCccEEEeCCCC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE--D--IEEKFDVLYDTIGD 222 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~--~~~~~d~v~d~~g~ 222 (327)
.++++|.| +|.+|...++.++.. |.++++++.++++.+.+++.|...+. .+..+.. + ..+.+|.++-+++.
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~~~-g~~vvvId~d~~~~~~~~~~g~~~i~-GD~~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLLAA-GIPLVVIETSRTRVDELRERGIRAVL-GNAANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHCCCeEEE-cCCCCHHHHHhcCccccCEEEEEcCC
Confidence 37899999 999999999999988 89999999999999999888866544 3332221 1 23578888766654
No 429
>PRK06487 glycerate dehydrogenase; Provisional
Probab=91.35 E-value=0.91 Score=40.62 Aligned_cols=99 Identities=20% Similarity=0.293 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc----
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC---- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---- 223 (327)
.|+++.|+| .|.+|..++..++.+ |.++++..+..... ... ..++.+.+...|+++-+....
T Consensus 147 ~gktvgIiG-~G~IG~~vA~~l~~f-gm~V~~~~~~~~~~------~~~------~~~l~ell~~sDiv~l~lPlt~~T~ 212 (317)
T PRK06487 147 EGKTLGLLG-HGELGGAVARLAEAF-GMRVLIGQLPGRPA------RPD------RLPLDELLPQVDALTLHCPLTEHTR 212 (317)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhC-CCEEEEECCCCCcc------ccc------ccCHHHHHHhCCEEEECCCCChHHh
Confidence 467999999 999999999999988 99998877542110 111 123555667788888776521
Q ss_pred ----hhhhhhhcCCCcEEEeeCCCCCCceeeEEeecCHHHHHHHHhHHHCCCce
Q 020320 224 ----KNSFVVAKDNAPIVDITWPPSHPRAIYSSLTVSGEILEKLRPFIESGKLK 273 (327)
Q Consensus 224 ----~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 273 (327)
...+..|+++..++.++-... ++ -..+++.+++|++.
T Consensus 213 ~li~~~~~~~mk~ga~lIN~aRG~v----------Vd---e~AL~~AL~~g~i~ 253 (317)
T PRK06487 213 HLIGARELALMKPGALLINTARGGL----------VD---EQALADALRSGHLG 253 (317)
T ss_pred cCcCHHHHhcCCCCeEEEECCCccc----------cC---HHHHHHHHHcCCee
Confidence 456778888888887763321 11 23556777778775
No 430
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=91.32 E-value=1.6 Score=37.63 Aligned_cols=96 Identities=9% Similarity=0.145 Sum_probs=60.9
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCC-EEEeCCCCChhhhccCccEEEeC
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGAD-KVIDYRKTKYEDIEEKFDVLYDT 219 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~d~v~d~ 219 (327)
+....+.++++||=+| || .|..+..+++...+.+++.++.++...+.+++.-.. .++..+...+. ....+|+++..
T Consensus 24 l~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~ 100 (258)
T PRK01683 24 LARVPLENPRYVVDLG-CG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ-PPQALDLIFAN 100 (258)
T ss_pred HhhCCCcCCCEEEEEc-cc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC-CCCCccEEEEc
Confidence 3456677889999888 55 456677777766467888888998888777654221 12222211111 12368888854
Q ss_pred CC-----C----chhhhhhhcCCCcEEEe
Q 020320 220 IG-----D----CKNSFVVAKDNAPIVDI 239 (327)
Q Consensus 220 ~g-----~----~~~~~~~l~~~g~~v~~ 239 (327)
.. . ...+.++|+++|.++..
T Consensus 101 ~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 101 ASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred cChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 33 1 14566889999998775
No 431
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=91.32 E-value=0.96 Score=39.00 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=28.1
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHhhcCCcEEEEeCC
Q 020320 148 TGQTIFIVGGA--GGVGTLVIQLAKHFYGASHVVATTS 183 (327)
Q Consensus 148 ~~~~vlI~ga~--g~~G~~a~~la~~~~g~~~v~~~~~ 183 (327)
.+++++|+||+ +++|.+++..+... |+++++..++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~~ 41 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYLP 41 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEecC
Confidence 46899999975 79999988877777 9988776543
No 432
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=91.30 E-value=1.1 Score=35.69 Aligned_cols=84 Identities=21% Similarity=0.253 Sum_probs=54.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCchh----
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDCKN---- 225 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~---- 225 (327)
.+|-++| .|.+|...+.-+... |.++.+..+++++.+.+.+.|+..+ .+..+.....|++|-++.....
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~g~~~~-----~s~~e~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEAGAEVA-----DSPAEAAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHTTEEEE-----SSHHHHHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEc-hHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHhhhhhh-----hhhhhHhhcccceEeecccchhhhhh
Confidence 3688899 899998877776666 8999999999998888887774322 2344455677999988875311
Q ss_pred -----hhhhhcCCCcEEEee
Q 020320 226 -----SFVVAKDNAPIVDIT 240 (327)
Q Consensus 226 -----~~~~l~~~g~~v~~g 240 (327)
.+..+.++..++.++
T Consensus 75 ~~~~~i~~~l~~g~iiid~s 94 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMS 94 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-S
T ss_pred hhhhHHhhccccceEEEecC
Confidence 344455555555553
No 433
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=91.26 E-value=1.3 Score=39.57 Aligned_cols=87 Identities=23% Similarity=0.239 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC-Cc--
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG-DC-- 223 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g-~~-- 223 (327)
-.|++|.|+| .|.+|...++-++.. |..+....+.+.+.+.+.+.++.+ .++...+...|+++-+.. ..
T Consensus 160 ~~gK~vgilG-~G~IG~~ia~rL~~F-g~~i~y~~r~~~~~~~~~~~~~~~------~d~~~~~~~sD~ivv~~pLt~~T 231 (336)
T KOG0069|consen 160 LEGKTVGILG-LGRIGKAIAKRLKPF-GCVILYHSRTQLPPEEAYEYYAEF------VDIEELLANSDVIVVNCPLTKET 231 (336)
T ss_pred ccCCEEEEec-CcHHHHHHHHhhhhc-cceeeeecccCCchhhHHHhcccc------cCHHHHHhhCCEEEEecCCCHHH
Confidence 3589999999 999999999999995 854555557777777777777652 234555667888875543 21
Q ss_pred -----hhhhhhhcCCCcEEEeeC
Q 020320 224 -----KNSFVVAKDNAPIVDITW 241 (327)
Q Consensus 224 -----~~~~~~l~~~g~~v~~g~ 241 (327)
...+..|++++.++..+-
T Consensus 232 ~~liNk~~~~~mk~g~vlVN~aR 254 (336)
T KOG0069|consen 232 RHLINKKFIEKMKDGAVLVNTAR 254 (336)
T ss_pred HHHhhHHHHHhcCCCeEEEeccc
Confidence 456778888888887753
No 434
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=91.25 E-value=1.6 Score=34.61 Aligned_cols=67 Identities=19% Similarity=0.281 Sum_probs=43.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhh------------ccCccEE
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDI------------EEKFDVL 216 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------------~~~~d~v 216 (327)
..+|+|+|+-|.+|.++++..|+. +.-+..++.++... .....+++.+..-..+. .+.+|.|
T Consensus 3 agrVivYGGkGALGSacv~~Fkan-nywV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKAN-NYWVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhc-CeEEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 357999999999999999999987 77666666543322 12233344333222221 1368999
Q ss_pred EeCCC
Q 020320 217 YDTIG 221 (327)
Q Consensus 217 ~d~~g 221 (327)
|...|
T Consensus 77 ~CVAG 81 (236)
T KOG4022|consen 77 FCVAG 81 (236)
T ss_pred EEeec
Confidence 97765
No 435
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=91.24 E-value=0.43 Score=40.75 Aligned_cols=41 Identities=27% Similarity=0.387 Sum_probs=33.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
++++||+|++|.+|...+..+... |.+++++.+++++.+.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~ 41 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAA 41 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 357999999999999988887777 88888888877655444
No 436
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=91.22 E-value=0.47 Score=40.40 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=32.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV 187 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~ 187 (327)
.+++++|+||+|.+|...+..+... |.+++++.+++++.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~ 43 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDA 43 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence 4678999999999999988887777 88888888876544
No 437
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=91.18 E-value=1.3 Score=42.64 Aligned_cols=66 Identities=23% Similarity=0.384 Sum_probs=43.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
.|+++.|+| .|.+|...+..++.+ |.++++.++... .+.+.++|...+ .++.+.+...|+++-++.
T Consensus 137 ~gktvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~-~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lP 202 (525)
T TIGR01327 137 YGKTLGVIG-LGRIGSIVAKRAKAF-GMKVLAYDPYIS-PERAEQLGVELV-----DDLDELLARADFITVHTP 202 (525)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCC-hhHHHhcCCEEc-----CCHHHHHhhCCEEEEccC
Confidence 578999999 999999999999988 999888876422 222344443211 123344455666665544
No 438
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=91.13 E-value=3.2 Score=35.02 Aligned_cols=99 Identities=21% Similarity=0.283 Sum_probs=60.7
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC--CcEEEEeCCcccHHHHHHcCC----C---EEEeCCCCChhhhcc
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG--ASHVVATTSTPKVEFVKELGA----D---KVIDYRKTKYEDIEE 211 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g--~~~v~~~~~~~~~~~~~~~g~----~---~v~~~~~~~~~~~~~ 211 (327)
+......++.+|+-+| ||. |..+..+++.. + .+++.++.++...+.+++.-. . .++..+..+......
T Consensus 44 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 120 (239)
T PRK00216 44 IKWLGVRPGDKVLDLA-CGT-GDLAIALAKAV-GKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALPFPDN 120 (239)
T ss_pred HHHhCCCCCCeEEEeC-CCC-CHHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCCCCCC
Confidence 3445566788999998 777 77888888875 4 678888888877777755311 1 111111111111123
Q ss_pred CccEEEeCCC-----C----chhhhhhhcCCCcEEEeeCC
Q 020320 212 KFDVLYDTIG-----D----CKNSFVVAKDNAPIVDITWP 242 (327)
Q Consensus 212 ~~d~v~d~~g-----~----~~~~~~~l~~~g~~v~~g~~ 242 (327)
.+|+++.... . ...+...|+++|.++.....
T Consensus 121 ~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 160 (239)
T PRK00216 121 SFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEFS 160 (239)
T ss_pred CccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEec
Confidence 5888874322 1 14566889999998876543
No 439
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.09 E-value=2.3 Score=37.23 Aligned_cols=95 Identities=21% Similarity=0.289 Sum_probs=63.9
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE 207 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (327)
++|++....+..++..+. -.|++++|.|.++.+|.-.+.++... |+.+.+. .+ +..+..
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~-gatVtv~-~s------------------~t~~l~ 196 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDK-NATVTLT-HS------------------RTRNLA 196 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHC-CCEEEEE-CC------------------CCCCHH
Confidence 345555445555555444 57999999998899998888888776 7766654 11 111334
Q ss_pred hhccCccEEEeCCCCchhh-hhhhcCCCcEEEeeCCC
Q 020320 208 DIEEKFDVLYDTIGDCKNS-FVVAKDNAPIVDITWPP 243 (327)
Q Consensus 208 ~~~~~~d~v~d~~g~~~~~-~~~l~~~g~~v~~g~~~ 243 (327)
...+.+|+++-++|..+.. -..++++..++.+|...
T Consensus 197 ~~~~~ADIVI~avg~~~~v~~~~ik~GavVIDvgin~ 233 (284)
T PRK14179 197 EVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNR 233 (284)
T ss_pred HHHhhCCEEEEecCccccCCHHHccCCcEEEEeccee
Confidence 4556789999999865222 23488888888888654
No 440
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=91.07 E-value=0.81 Score=44.86 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=63.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChh--h--hccCccEEEeCCCCch
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYE--D--IEEKFDVLYDTIGDCK 224 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~--~~~~~d~v~d~~g~~~ 224 (327)
.++++|.| .|.+|+..++.++.. |.++++++.++++.+.+++.|...+. .+..+.. + ..+++|.++-+.+...
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~~g~~v~~-GDat~~~~L~~agi~~A~~vv~~~~d~~ 476 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMAN-KMRITVLERDISAVNLMRKYGYKVYY-GDATQLELLRAAGAEKAEAIVITCNEPE 476 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHhCCCeEEE-eeCCCHHHHHhcCCccCCEEEEEeCCHH
Confidence 36899999 999999999999987 99999999999999999998865433 3333222 2 2357899998888542
Q ss_pred h------hhhhhcCCCcEEEe
Q 020320 225 N------SFVVAKDNAPIVDI 239 (327)
Q Consensus 225 ~------~~~~l~~~g~~v~~ 239 (327)
. ..+...|..+++..
T Consensus 477 ~n~~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 477 DTMKIVELCQQHFPHLHILAR 497 (601)
T ss_pred HHHHHHHHHHHHCCCCeEEEE
Confidence 1 23445666666654
No 441
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=91.06 E-value=0.76 Score=41.56 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=43.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHc-CCCEEE-eCC-C-CChhhhccCccEEEeCCC
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKEL-GADKVI-DYR-K-TKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~-g~~~v~-~~~-~-~~~~~~~~~~d~v~d~~g 221 (327)
.+|||+||+|-+|...+..+...+|.++++++++..+....... +...+. |-. + ..+.....++|+||.+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 36999999999999988887654357888877655433322111 122111 211 1 112233468999998764
No 442
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.03 E-value=2.8 Score=36.82 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=64.8
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe-CCCCCh
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID-YRKTKY 206 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~-~~~~~~ 206 (327)
+.|++....+..++..++ -.|++++|.|.+..+|.=...++... +.. .+++..++ ++..+.
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~-~~~----------------~~aTVtvchs~T~nl 198 (293)
T PRK14185 136 FVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQK-AYP----------------GDCTVTVCHSRSKNL 198 (293)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcC-CCC----------------CCCEEEEecCCCCCH
Confidence 345555445555555554 47999999999999999888888765 310 12222222 222344
Q ss_pred hhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 207 EDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 207 ~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
....+.+|+++-++|..+ -.-..++++..++.+|...
T Consensus 199 ~~~~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~ 236 (293)
T PRK14185 199 KKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTR 236 (293)
T ss_pred HHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecCcc
Confidence 445567999999999763 3346788999999998754
No 443
>PRK05599 hypothetical protein; Provisional
Probab=91.03 E-value=1.6 Score=37.36 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=30.4
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
+++|+||++++|.+.+..+. . |.+++++.+++++.+.+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~ 39 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGL 39 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHH
Confidence 68999999999999887765 5 88888888877765433
No 444
>PRK08219 short chain dehydrogenase; Provisional
Probab=91.01 E-value=1.6 Score=36.46 Aligned_cols=71 Identities=17% Similarity=0.246 Sum_probs=44.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEEEeCCCCChhh---hc---cCccEEEeCCC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKVIDYRKTKYED---IE---EKFDVLYDTIG 221 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~---~~---~~~d~v~d~~g 221 (327)
.++++|+||+|.+|..++..+... .+++++.+++++.+.+.+ ...-.++..+-.+... .. .++|.++.++|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT--HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh--CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 357999999999999988777654 678888887666544432 2111222222222221 12 26899999887
No 445
>PRK05855 short chain dehydrogenase; Validated
Probab=90.99 E-value=1.2 Score=43.17 Aligned_cols=74 Identities=16% Similarity=0.238 Sum_probs=48.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCE-EEeCCCCChhh---h-------cc
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADK-VIDYRKTKYED---I-------EE 211 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~---~-------~~ 211 (327)
..+.++||+||+|++|.+.+..+... |.+++++.++.++.+.+ ++.|... .+..+-.+... . ..
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 34678999999999999988777777 99988888877655433 2234322 12111111111 1 13
Q ss_pred CccEEEeCCC
Q 020320 212 KFDVLYDTIG 221 (327)
Q Consensus 212 ~~d~v~d~~g 221 (327)
++|++++++|
T Consensus 392 ~id~lv~~Ag 401 (582)
T PRK05855 392 VPDIVVNNAG 401 (582)
T ss_pred CCcEEEECCc
Confidence 6899999987
No 446
>PLN02206 UDP-glucuronate decarboxylase
Probab=90.97 E-value=0.89 Score=42.77 Aligned_cols=71 Identities=24% Similarity=0.302 Sum_probs=44.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHH-HHcC---CCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFV-KELG---ADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~-~~~g---~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
..+.+|||+||+|-+|..++..+... |.+++++++... +.+.. ..+. .+. ++.+ .......++|.||.+++
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~-G~~V~~ld~~~~~~~~~~~~~~~~~~~~~-i~~D--~~~~~l~~~D~ViHlAa 192 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMAR-GDSVIVVDNFFTGRKENVMHHFSNPNFEL-IRHD--VVEPILLEVDQIYHLAC 192 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHC-cCEEEEEeCCCccchhhhhhhccCCceEE-EECC--ccChhhcCCCEEEEeee
Confidence 35689999999999999999988887 888888765322 11111 1121 221 1111 11123357899998875
No 447
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.92 E-value=0.58 Score=39.65 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
.+.+++|+|++|.+|...+..+... |.+++++.+++++.+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~ 45 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLK 45 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence 3578999999999999988877777 888888888766543
No 448
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=90.88 E-value=1.3 Score=39.78 Aligned_cols=88 Identities=20% Similarity=0.280 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC-- 223 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-- 223 (327)
+-+|+.++|.| -|-+|.-+++.++.+ |++++++...|-+.-.+..=|.. |.. +.+...-.|+++-++|..
T Consensus 206 liaGK~vVV~G-YG~vGrG~A~~~rg~-GA~ViVtEvDPI~AleA~MdGf~-V~~-----m~~Aa~~gDifiT~TGnkdV 277 (420)
T COG0499 206 LLAGKNVVVAG-YGWVGRGIAMRLRGM-GARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAAKTGDIFVTATGNKDV 277 (420)
T ss_pred eecCceEEEec-ccccchHHHHHhhcC-CCeEEEEecCchHHHHHhhcCcE-EEE-----hHHhhhcCCEEEEccCCcCc
Confidence 56899999999 999999999999999 99999988877765555444544 322 233344568888888853
Q ss_pred --hhhhhhhcCCCcEEEeeC
Q 020320 224 --KNSFVVAKDNAPIVDITW 241 (327)
Q Consensus 224 --~~~~~~l~~~g~~v~~g~ 241 (327)
...+..++++..+...|.
T Consensus 278 i~~eh~~~MkDgaIl~N~GH 297 (420)
T COG0499 278 IRKEHFEKMKDGAILANAGH 297 (420)
T ss_pred cCHHHHHhccCCeEEecccc
Confidence 455667777777766663
No 449
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=90.83 E-value=1.1 Score=42.10 Aligned_cols=72 Identities=22% Similarity=0.258 Sum_probs=44.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHHHH-cCC--CEEEeCCCCChhhhccCccEEEeCCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKE-LGA--DKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~~~-~g~--~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
++..+|+|+||+|-+|..++..+... |.+++++++... +...... .+. ...+..+ .......++|+||.+++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~-G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~D--i~~~~~~~~D~ViHlAa 193 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGR-GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHD--VVEPILLEVDQIYHLAC 193 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCccHhHhhhhccCCceEEEECc--cccccccCCCEEEECce
Confidence 45678999999999999999988887 888888875422 2221111 111 1112211 11122357999999875
No 450
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=90.81 E-value=2.2 Score=35.50 Aligned_cols=87 Identities=16% Similarity=0.176 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-c-HHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-K-VEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC-- 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~-~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-- 223 (327)
.|.+|+|.| +|.+|...+..+... |+++.++..... . .+++.+ + ...+..... ....+.++|+|+-+++..
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~~-ga~V~VIs~~~~~~l~~l~~~-~-~i~~~~~~~-~~~~l~~adlViaaT~d~el 83 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLKY-GAHIVVISPELTENLVKLVEE-G-KIRWKQKEF-EPSDIVDAFLVIAATNDPRV 83 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEcCCCCHHHHHHHhC-C-CEEEEecCC-ChhhcCCceEEEEcCCCHHH
Confidence 568999999 799999887777666 777776654321 1 122222 2 111211111 122356899999998854
Q ss_pred hhhhhhhcCCCcEEEe
Q 020320 224 KNSFVVAKDNAPIVDI 239 (327)
Q Consensus 224 ~~~~~~l~~~g~~v~~ 239 (327)
+..+...+..+.++..
T Consensus 84 N~~i~~~a~~~~lvn~ 99 (202)
T PRK06718 84 NEQVKEDLPENALFNV 99 (202)
T ss_pred HHHHHHHHHhCCcEEE
Confidence 4444333233444443
No 451
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=90.80 E-value=3.5 Score=34.30 Aligned_cols=88 Identities=20% Similarity=0.214 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc-cHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc--h
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP-KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC--K 224 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--~ 224 (327)
.|.+|+|.| .|.+|..-+..+... |+++.++..... ....+.+.| ...+...+.. ...+.++++|+-+.+.. +
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~-ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~~~-~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKA-GAQLRVIAEELESELTLLAEQG-GITWLARCFD-ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHC-CCEEEEEcCCCCHHHHHHHHcC-CEEEEeCCCC-HHHhCCcEEEEECCCCHHHH
Confidence 467999999 899999988888877 888877764332 222233333 1122222222 23457899999998853 3
Q ss_pred -hhhhhhcCCCcEEEe
Q 020320 225 -NSFVVAKDNAPIVDI 239 (327)
Q Consensus 225 -~~~~~l~~~g~~v~~ 239 (327)
......+..|..+..
T Consensus 84 ~~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 84 RRVAHAARARGVPVNV 99 (205)
T ss_pred HHHHHHHHHcCCEEEE
Confidence 333344455555543
No 452
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=90.78 E-value=0.55 Score=41.88 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=36.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
-.+.+++|+|+++++|..++..+... |++++.+.++.++.+.+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~-Ga~Vv~~~R~~~~~~~~ 75 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALR-GAHVVLACRNEERGEEA 75 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence 45689999999999999999888888 89999999988655444
No 453
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=90.70 E-value=3.5 Score=36.97 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=53.9
Q ss_pred EEEEEcCCchHHHHHHHHHHhhc---CCcEEEEeC--CcccHHHHHHcCCC--------------EEEeC------CCCC
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFY---GASHVVATT--STPKVEFVKELGAD--------------KVIDY------RKTK 205 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~---g~~~v~~~~--~~~~~~~~~~~g~~--------------~v~~~------~~~~ 205 (327)
+|.|.| .|.+|....+++.... ..+++.+-. +.+...++.++.-. .+++. .+.+
T Consensus 1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 477999 6999999988877641 144444332 33333444443210 01111 0011
Q ss_pred hhhh---ccCccEEEeCCCCc---hhhhhhhcCCCcEEEeeCCC
Q 020320 206 YEDI---EEKFDVLYDTIGDC---KNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 206 ~~~~---~~~~d~v~d~~g~~---~~~~~~l~~~g~~v~~g~~~ 243 (327)
..+. ..++|+||+|+|.. ..+...+..|++.+..+.+.
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~ 123 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG 123 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence 1111 13899999999954 66778888888999888664
No 454
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=90.68 E-value=0.72 Score=39.85 Aligned_cols=69 Identities=19% Similarity=0.192 Sum_probs=50.7
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEe-CCC-CChhhhccCccEEEeCCC
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVID-YRK-TKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~-~~~-~~~~~~~~~~d~v~d~~g 221 (327)
+|||+||+|-+|..++..+... |.++.+..+++++..... .+.+.+.. ..+ ..+.....|++.++-..+
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~-~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~ 72 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLAR-GHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISG 72 (275)
T ss_pred eEEEEecccchHHHHHHHHHhC-CCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEec
Confidence 6899999999999999999988 999999999988877766 55554432 222 223334467888776555
No 455
>PRK07985 oxidoreductase; Provisional
Probab=90.66 E-value=1.8 Score=38.23 Aligned_cols=35 Identities=17% Similarity=0.322 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS 183 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~ 183 (327)
.+++++|+||++++|.++++.+... |+++++..++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~-G~~Vi~~~~~ 82 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYARE-GADVAISYLP 82 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEecCC
Confidence 5679999999999999988888877 9988876543
No 456
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=90.58 E-value=0.53 Score=40.61 Aligned_cols=65 Identities=20% Similarity=0.259 Sum_probs=45.1
Q ss_pred EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhcc-CccEEEeCCCC
Q 020320 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEE-KFDVLYDTIGD 222 (327)
Q Consensus 152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~d~v~d~~g~ 222 (327)
|+|.||+|-+|.+.+..++.. |-.+++.++++.+.+.-...... ..+...+... ++|+|++-+|.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~-gh~v~iltR~~~~~~~~~~~~v~-----~~~~~~~~~~~~~DavINLAG~ 66 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG-GHQVTILTRRPPKASQNLHPNVT-----LWEGLADALTLGIDAVINLAGE 66 (297)
T ss_pred CeEeccccchhHHHHHHHHhC-CCeEEEEEcCCcchhhhcCcccc-----ccchhhhcccCCCCEEEECCCC
Confidence 589999999999999999887 88899999887765543222111 1112222233 69999999983
No 457
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.58 E-value=2.7 Score=36.89 Aligned_cols=95 Identities=18% Similarity=0.219 Sum_probs=63.5
Q ss_pred ccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHh----hcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC
Q 020320 129 SLPLAVQTAIEGFKTAGF-KTGQTIFIVGGAGGVGTLVIQLAKH----FYGASHVVATTSTPKVEFVKELGADKVIDYRK 203 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~~-~~~~~vlI~ga~g~~G~~a~~la~~----~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~ 203 (327)
++|++....+..++..++ -.|++++|.|.+..+|.=...++.. . ++.+.+.-.. .
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~-~AtVt~~hs~-------------------t 195 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFA-NATVTVCHSR-------------------T 195 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccC-CCEEEEEeCC-------------------c
Confidence 346655555555655543 4689999999999999888888876 4 5555443322 1
Q ss_pred CChhhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 204 TKYEDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 204 ~~~~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
.+.....+.+|+++-++|... -.-..++++..++.+|...
T Consensus 196 ~~l~~~~~~ADIVI~AvG~p~li~~~~vk~GavVIDVGi~~ 236 (286)
T PRK14184 196 PDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINR 236 (286)
T ss_pred hhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeeec
Confidence 233444567889999998652 2335668888888888654
No 458
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.57 E-value=1.8 Score=38.38 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=29.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS 183 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~ 183 (327)
.+++++|+|+++++|.+.+..+... |+++++..++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~-Ga~Vv~~~~~ 45 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARL-GATVVVNDVA 45 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCC
Confidence 4689999999999999988777777 8888887753
No 459
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=90.56 E-value=1.8 Score=34.37 Aligned_cols=70 Identities=19% Similarity=0.163 Sum_probs=43.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGDC 223 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 223 (327)
.|.+|+|.| +|.+|..-++.+... |+++.++ +++..+.+.+++.-. +..... ....+.++|+|+-+++..
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~~-ga~V~VI--sp~~~~~l~~l~~i~-~~~~~~-~~~dl~~a~lViaaT~d~ 81 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKDT-GAFVTVV--SPEICKEMKELPYIT-WKQKTF-SNDDIKDAHLIYAATNQH 81 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEE--cCccCHHHHhccCcE-EEeccc-ChhcCCCceEEEECCCCH
Confidence 578999999 799998877766666 8877766 344434444454211 221111 122356899999998753
No 460
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=90.54 E-value=1.5 Score=39.40 Aligned_cols=32 Identities=31% Similarity=0.487 Sum_probs=30.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~ 182 (327)
|+++-|+| .|.+|..+++.++.+ |.++++.+.
T Consensus 142 gkTvGIiG-~G~IG~~va~~l~af-gm~v~~~d~ 173 (324)
T COG0111 142 GKTVGIIG-LGRIGRAVAKRLKAF-GMKVIGYDP 173 (324)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhC-CCeEEEECC
Confidence 88999999 999999999999998 999999997
No 461
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=90.47 E-value=3.7 Score=35.10 Aligned_cols=99 Identities=15% Similarity=0.160 Sum_probs=64.1
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHH----HcCCCEEEeCCCCChhhhc--cC
Q 020320 140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVK----ELGADKVIDYRKTKYEDIE--EK 212 (327)
Q Consensus 140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~--~~ 212 (327)
.+...++.+|++|+=.| .+.|-+++.+|+..+. -+++.....++..+.|+ ++|....+.....|..+.. ..
T Consensus 86 I~~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~ 163 (256)
T COG2519 86 IVARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEED 163 (256)
T ss_pred HHHHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccc
Confidence 44678999999998876 4568888899988844 36666667777666663 3454332211112222211 26
Q ss_pred ccEEE-eCCC---CchhhhhhhcCCCcEEEee
Q 020320 213 FDVLY-DTIG---DCKNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 213 ~d~v~-d~~g---~~~~~~~~l~~~g~~v~~g 240 (327)
+|.+| |.-. .+..+...|+++|.++.+.
T Consensus 164 vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 164 VDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred cCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 88887 5543 2377889999999988873
No 462
>PLN03013 cysteine synthase
Probab=90.43 E-value=2 Score=40.06 Aligned_cols=58 Identities=17% Similarity=0.305 Sum_probs=47.5
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEEe
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVID 200 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~~ 200 (327)
+...+.+|...+|...+|..|++.+.+++.+ |.+.++++. ++++.+.++.+|++.++.
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~-G~~~~VvvP~~~s~~K~~~ira~GAeVi~v 227 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASR-GYRLILTMPASMSMERRVLLKAFGAELVLT 227 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHc-CCCEEEEECCCCcHHHHHHHHHcCCEEEEE
Confidence 4566788877777777999999999999998 999888873 566888889999887654
No 463
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=90.41 E-value=1.8 Score=40.71 Aligned_cols=69 Identities=25% Similarity=0.431 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc-ccH----HHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST-PKV----EFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~-~~~----~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
.+++++|+| .|.+|+.++..+... |+++.+.+.++ +.. +.+.+.|..... .+..+ ....++|+|+.+.|
T Consensus 4 ~~k~v~iiG-~g~~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~d~vv~~~g 77 (450)
T PRK14106 4 KGKKVLVVG-AGVSGLALAKFLKKL-GAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE--EFLEGVDLVVVSPG 77 (450)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch--hHhhcCCEEEECCC
Confidence 468899999 666999999999888 99988888654 222 223344554322 22111 23457999999888
No 464
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=90.36 E-value=1.7 Score=36.97 Aligned_cols=36 Identities=25% Similarity=0.381 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~ 184 (327)
.++++||+|++|.+|...+..+... |.++++..++.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~-G~~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEA-GAKVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecch
Confidence 4689999999999999988887777 89988888765
No 465
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=90.29 E-value=0.78 Score=38.08 Aligned_cols=67 Identities=22% Similarity=0.221 Sum_probs=45.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEEeCC
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLYDTI 220 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~ 220 (327)
-.|++++|.| .|.+|..+++.+... |.++++.+.++++.+.+ +.+++.. ++.. . +. ....|+++-+.
T Consensus 26 l~gk~v~I~G-~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~-~-l~--~~~~Dv~vp~A 93 (200)
T cd01075 26 LEGKTVAVQG-LGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELFGATV-VAPE-E-IY--SVDADVFAPCA 93 (200)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcCCEE-Ecch-h-hc--cccCCEEEecc
Confidence 4678999999 899999999999988 99999888877765554 4456532 2221 1 11 12577777543
No 466
>PRK06141 ornithine cyclodeaminase; Validated
Probab=90.24 E-value=4.7 Score=36.05 Aligned_cols=96 Identities=17% Similarity=0.097 Sum_probs=57.3
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHH-HHHHc---CCCEEEeCCCCChhhhccCccEEE
Q 020320 143 TAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVE-FVKEL---GADKVIDYRKTKYEDIEEKFDVLY 217 (327)
Q Consensus 143 ~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~-~~~~~---g~~~v~~~~~~~~~~~~~~~d~v~ 217 (327)
........+++|+| +|..|.+.+..+....+ .++.+..+++++.+ +++++ |..... ..+..+...++|+|+
T Consensus 119 ~La~~~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~---~~~~~~av~~aDIVi 194 (314)
T PRK06141 119 YLARKDASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV---VTDLEAAVRQADIIS 194 (314)
T ss_pred HhCCCCCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE---eCCHHHHHhcCCEEE
Confidence 33345678999999 89999888764444225 45666667777644 34444 322221 123344567899999
Q ss_pred eCCCCchhh--hhhhcCCCcEEEeeCC
Q 020320 218 DTIGDCKNS--FVVAKDNAPIVDITWP 242 (327)
Q Consensus 218 d~~g~~~~~--~~~l~~~g~~v~~g~~ 242 (327)
.++.+.... ...++++-.+..+|..
T Consensus 195 ~aT~s~~pvl~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 195 CATLSTEPLVRGEWLKPGTHLDLVGNF 221 (314)
T ss_pred EeeCCCCCEecHHHcCCCCEEEeeCCC
Confidence 887754222 2567777655555543
No 467
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=90.24 E-value=1.5 Score=40.10 Aligned_cols=90 Identities=16% Similarity=0.200 Sum_probs=56.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEe--CCccc-HHHHHHcCCCEEEeCCCCChh------------------
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFY-GASHVVAT--TSTPK-VEFVKELGADKVIDYRKTKYE------------------ 207 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~--~~~~~-~~~~~~~g~~~v~~~~~~~~~------------------ 207 (327)
++|.|+|++|.+|..++.+.+... ..++++.+ .+.++ .+.+++++...+.-.++....
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 579999999999999998887653 34566555 23333 345577887766543321110
Q ss_pred ---hhc--cCccEEEeCCC---CchhhhhhhcCCCcEEEe
Q 020320 208 ---DIE--EKFDVLYDTIG---DCKNSFVVAKDNAPIVDI 239 (327)
Q Consensus 208 ---~~~--~~~d~v~d~~g---~~~~~~~~l~~~g~~v~~ 239 (327)
+.. ..+|+|+.+.+ +...++.+++.|.++..-
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 001 25899998875 336677777777665543
No 468
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=90.23 E-value=0.71 Score=39.89 Aligned_cols=73 Identities=22% Similarity=0.291 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCEE-EeCCCCChhh----------hccC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADKV-IDYRKTKYED----------IEEK 212 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~----------~~~~ 212 (327)
.+++++|+|+++.+|..++..+... |.++++..+++++.+.+ ++.+.... +..+-.+..+ ....
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKA-GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5689999999999999888877777 89988888776654333 22343321 2111122111 1146
Q ss_pred ccEEEeCCC
Q 020320 213 FDVLYDTIG 221 (327)
Q Consensus 213 ~d~v~d~~g 221 (327)
+|.++.+.|
T Consensus 88 id~li~~ag 96 (265)
T PRK07097 88 IDILVNNAG 96 (265)
T ss_pred CCEEEECCC
Confidence 899999887
No 469
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=90.21 E-value=2.9 Score=38.09 Aligned_cols=76 Identities=24% Similarity=0.374 Sum_probs=43.3
Q ss_pred HhcCCCCCCEEEEE-cCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH----HHcCCCE--EEeCCCCChhhhcc---
Q 020320 142 KTAGFKTGQTIFIV-GGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV----KELGADK--VIDYRKTKYEDIEE--- 211 (327)
Q Consensus 142 ~~~~~~~~~~vlI~-ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~----~~~g~~~--v~~~~~~~~~~~~~--- 211 (327)
....+++|++||=. .|.|+--...+++++.. |..+++.+.++.|...+ +.+|... ++..+...+.....
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~-~~iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~~~~~~ 228 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENE-GAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLPGGE 228 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCC-CceEEEEcCCHHHHHHHHHHHHHcCCCceEEEecccccccccccccC
Confidence 46788999877533 33444444444444433 44567888888887666 4588774 33333322222221
Q ss_pred CccEEE-e
Q 020320 212 KFDVLY-D 218 (327)
Q Consensus 212 ~~d~v~-d 218 (327)
.+|.++ |
T Consensus 229 ~fD~iLlD 236 (355)
T COG0144 229 KFDRILLD 236 (355)
T ss_pred cCcEEEEC
Confidence 378887 5
No 470
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=90.19 E-value=1.1 Score=39.05 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=47.3
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHH-HHcCCCEEEeCCCCChhhhccCccEEE
Q 020320 140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFV-KELGADKVIDYRKTKYEDIEEKFDVLY 217 (327)
Q Consensus 140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v~ 217 (327)
+++..+...+++++|+| +|+.+.+++..++.+ |+. +.++.+++++.+.+ +.++.+. . ... ....+|+++
T Consensus 113 ~L~~~~~~~~~~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~~a~~la~~~~~~~----~-~~~--~~~~~dlvI 183 (272)
T PRK12550 113 LLASYQVPPDLVVALRG-SGGMAKAVAAALRDA-GFTDGTIVARNEKTGKALAELYGYEW----R-PDL--GGIEADILV 183 (272)
T ss_pred HHHhcCCCCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhCCcc----h-hhc--ccccCCEEE
Confidence 34444445567999999 899999999888888 765 66666777765444 4454221 0 001 123589999
Q ss_pred eCCC
Q 020320 218 DTIG 221 (327)
Q Consensus 218 d~~g 221 (327)
+|+.
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9874
No 471
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=90.11 E-value=2.3 Score=36.13 Aligned_cols=34 Identities=26% Similarity=0.481 Sum_probs=28.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~ 182 (327)
.+++++|+|++|.+|...+..+... |.++++..+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~-g~~v~~~~~ 38 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQE-GAKVVINYN 38 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEcC
Confidence 4689999999999999988877777 888876553
No 472
>PRK07102 short chain dehydrogenase; Provisional
Probab=90.10 E-value=0.69 Score=39.35 Aligned_cols=38 Identities=18% Similarity=0.321 Sum_probs=32.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHH
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVE 188 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~ 188 (327)
++++|+||+|.+|...+..+... |.+++++.+++++.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~ 39 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAA-GARLYLAARDVERLE 39 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHH
Confidence 57999999999999988888877 899888888776543
No 473
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.02 E-value=4 Score=35.79 Aligned_cols=98 Identities=20% Similarity=0.179 Sum_probs=63.9
Q ss_pred ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEE-eCCCCCh
Q 020320 129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVI-DYRKTKY 206 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~-~~~~~~~ 206 (327)
++|++....+..++..+ --.|++++|.|.+..+|.=.+.++... |+.+ +++..+ +++..+.
T Consensus 132 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~~~~----------------~AtVtvchs~T~~l 194 (287)
T PRK14181 132 FIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQK-HPDT----------------NATVTLLHSQSENL 194 (287)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhC-cCCC----------------CCEEEEeCCCCCCH
Confidence 44555544555555544 346999999999999998888888765 3210 111111 1222344
Q ss_pred hhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 207 EDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 207 ~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
....+.+|+++-++|..+ -.-..+++|..++.+|...
T Consensus 195 ~~~~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvGin~ 232 (287)
T PRK14181 195 TEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSR 232 (287)
T ss_pred HHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence 555678999999999763 3446788999999998654
No 474
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=90.02 E-value=1.7 Score=37.56 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=27.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~ 182 (327)
.+++|+||++++|.+.++.+... |++++++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~-G~~V~~~~~ 33 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE-GYRVVLHYH 33 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC-CCeEEEEcC
Confidence 57899999999999988888877 898887764
No 475
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=89.98 E-value=2.9 Score=36.29 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=61.3
Q ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHhhc-CCcEEEEeCCcccHHHHHHc-C------CCE--EEeCCCCChhhhcc
Q 020320 142 KTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFY-GASHVVATTSTPKVEFVKEL-G------ADK--VIDYRKTKYEDIEE 211 (327)
Q Consensus 142 ~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~-g~~~v~~~~~~~~~~~~~~~-g------~~~--v~~~~~~~~~~~~~ 211 (327)
+..++.++++||=+| ||. |..+..+++..+ ..+++.++.+++..+.+++- . .+. .+..+...+.....
T Consensus 67 ~~~~~~~~~~VLDlG-cGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~~ 144 (261)
T PLN02233 67 SWSGAKMGDRVLDLC-CGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDDC 144 (261)
T ss_pred HHhCCCCCCEEEEEC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCCC
Confidence 456778899999988 554 445666777652 24788888999888777532 1 111 12222122111123
Q ss_pred CccEEEeCCC-----C----chhhhhhhcCCCcEEEeeCCC
Q 020320 212 KFDVLYDTIG-----D----CKNSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 212 ~~d~v~d~~g-----~----~~~~~~~l~~~g~~v~~g~~~ 243 (327)
.+|.|+-..+ . ...+.+.|+|||+++......
T Consensus 145 sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~ 185 (261)
T PLN02233 145 YFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK 185 (261)
T ss_pred CEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence 5888875443 1 255778999999998886543
No 476
>PRK06523 short chain dehydrogenase; Provisional
Probab=89.97 E-value=0.56 Score=40.34 Aligned_cols=37 Identities=27% Similarity=0.519 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP 185 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~ 185 (327)
.++++||+|++|.+|...++.+... |.+++++.++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEA-GARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHC-CCEEEEEeCChh
Confidence 5789999999999999988888877 999888887654
No 477
>PRK12746 short chain dehydrogenase; Provisional
Probab=89.95 E-value=1.9 Score=36.79 Aligned_cols=39 Identities=15% Similarity=0.302 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEE-eCCcccH
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVA-TTSTPKV 187 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~-~~~~~~~ 187 (327)
.+.+++|+|++|.+|...+..+... |.++++. .++.++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~-G~~v~i~~~r~~~~~ 44 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLAND-GALVAIHYGRNKQAA 44 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHH
Confidence 3578999999999999998888777 8887665 3555443
No 478
>PRK07023 short chain dehydrogenase; Provisional
Probab=89.87 E-value=1.4 Score=37.36 Aligned_cols=35 Identities=14% Similarity=0.213 Sum_probs=29.7
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPK 186 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~ 186 (327)
+++|+|++|.+|..++..+... |.+++++.++.++
T Consensus 3 ~vlItGasggiG~~ia~~l~~~-G~~v~~~~r~~~~ 37 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQP-GIAVLGVARSRHP 37 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhC-CCEEEEEecCcch
Confidence 6899999999999988888777 8998888876543
No 479
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.85 E-value=2.4 Score=36.24 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=29.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~ 184 (327)
++++|+|++|.+|..++..+... |.+++++.++.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~-g~~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAA-GFDLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecCc
Confidence 57999999999999988888877 88888887643
No 480
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=89.83 E-value=0.36 Score=36.69 Aligned_cols=91 Identities=19% Similarity=0.141 Sum_probs=47.6
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc----cHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCCC--ch
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP----KVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIGD--CK 224 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g~--~~ 224 (327)
+|.|+|.+|.+|.+.++.+....+.+.+.+..... ..+..+-.|....-....+++......+|+++|++.. ..
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT~p~~~~ 81 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFTNPDAVY 81 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-HHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcCChHHhH
Confidence 68999977999999999999865777776664332 1111121221110001113445555669999999842 12
Q ss_pred hhhhhhcCCCcEEEeeC
Q 020320 225 NSFVVAKDNAPIVDITW 241 (327)
Q Consensus 225 ~~~~~l~~~g~~v~~g~ 241 (327)
..++.....|.-+.+|.
T Consensus 82 ~~~~~~~~~g~~~ViGT 98 (124)
T PF01113_consen 82 DNLEYALKHGVPLVIGT 98 (124)
T ss_dssp HHHHHHHHHT-EEEEE-
T ss_pred HHHHHHHhCCCCEEEEC
Confidence 23333333344444543
No 481
>PLN02306 hydroxypyruvate reductase
Probab=89.82 E-value=1.7 Score=40.08 Aligned_cols=91 Identities=23% Similarity=0.287 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHH-hhcCCcEEEEeCCccc-HH-HHHHcCCC-------EEEeCCCCChhhhccCccEEE
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAK-HFYGASHVVATTSTPK-VE-FVKELGAD-------KVIDYRKTKYEDIEEKFDVLY 217 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~-~~~g~~~v~~~~~~~~-~~-~~~~~g~~-------~v~~~~~~~~~~~~~~~d~v~ 217 (327)
.|+++.|+| .|.+|..+++.++ .+ |.++++.++.... .. ....++.. ..-.....++.+.+...|+++
T Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~~f-Gm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV~ 241 (386)
T PLN02306 164 KGQTVGVIG-AGRIGSAYARMMVEGF-KMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVIS 241 (386)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcC-CCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEEE
Confidence 478999999 9999999999985 66 9999988865432 11 11223211 000001134566667889988
Q ss_pred eCCCCc--------hhhhhhhcCCCcEEEee
Q 020320 218 DTIGDC--------KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 218 d~~g~~--------~~~~~~l~~~g~~v~~g 240 (327)
-+.... ...+..|+++..++.++
T Consensus 242 lh~Plt~~T~~lin~~~l~~MK~ga~lIN~a 272 (386)
T PLN02306 242 LHPVLDKTTYHLINKERLALMKKEAVLVNAS 272 (386)
T ss_pred EeCCCChhhhhhcCHHHHHhCCCCeEEEECC
Confidence 765421 45678888888888775
No 482
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=89.82 E-value=1.1 Score=38.78 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=48.7
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCC--CChhhhc--cCccEEEeCCCC
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRK--TKYEDIE--EKFDVLYDTIGD 222 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~--~~~d~v~d~~g~ 222 (327)
+|||+||+|- |...+..+... |.++++.+.++...+.+...|...+....- ..+...+ .++|+++|++-.
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~-g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQ-GIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhC-CCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence 6999997775 88888777666 888999998888777777666555542221 1222222 468999999873
No 483
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=89.81 E-value=7.4 Score=34.99 Aligned_cols=94 Identities=14% Similarity=0.091 Sum_probs=58.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHH-HHHHc----CCCEEEeCCCCChhhhccCccEEEeC
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVE-FVKEL----GADKVIDYRKTKYEDIEEKFDVLYDT 219 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~-~~~~~----g~~~v~~~~~~~~~~~~~~~d~v~d~ 219 (327)
.....+++|+| +|..+.+.+..+....+.+ +.+..+++++.+ +++++ |.+... ..+......++|+|+.+
T Consensus 126 ~~~~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~---~~~~~~av~~aDiVvta 201 (326)
T TIGR02992 126 REDSSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTA---ATDPRAAMSGADIIVTT 201 (326)
T ss_pred CCCCcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEE---eCCHHHHhccCCEEEEe
Confidence 34567899999 8999988777776432655 445557766644 33433 433221 12344556789999999
Q ss_pred CCCchhh--hhhhcCCCcEEEeeCCC
Q 020320 220 IGDCKNS--FVVAKDNAPIVDITWPP 243 (327)
Q Consensus 220 ~g~~~~~--~~~l~~~g~~v~~g~~~ 243 (327)
+.+.... ...++++-.+..+|...
T Consensus 202 T~s~~p~i~~~~l~~g~~i~~vg~~~ 227 (326)
T TIGR02992 202 TPSETPILHAEWLEPGQHVTAMGSDA 227 (326)
T ss_pred cCCCCcEecHHHcCCCcEEEeeCCCC
Confidence 8754222 24677777777777543
No 484
>PRK09134 short chain dehydrogenase; Provisional
Probab=89.79 E-value=2.5 Score=36.20 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCC
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTS 183 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~ 183 (327)
.+++++|+||+|.+|..++..+... |.+++++.+.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~-g~~v~~~~~~ 42 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH-GFDVAVHYNR 42 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 4678999999999999988877777 8888877653
No 485
>PRK07201 short chain dehydrogenase; Provisional
Probab=89.75 E-value=1.7 Score=43.11 Aligned_cols=41 Identities=17% Similarity=0.374 Sum_probs=34.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV 190 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~ 190 (327)
+++++|+||+|++|..++..+... |.+++++.+++++.+.+
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 411 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEA-GATVFLVARNGEALDEL 411 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 678999999999999988877777 89999988877765433
No 486
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.58 E-value=2.1 Score=36.36 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=27.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT 182 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~ 182 (327)
+.++||+||+|.+|...+..+... |.++++..+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~-g~~v~~~~~ 38 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKE-GSLVVVNAK 38 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeC
Confidence 578999999999999988877777 888776664
No 487
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=89.58 E-value=1.1 Score=38.45 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=59.6
Q ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcC-CcEEEEeCCcccHHHHH----HcCCC-EE-EeCCC---CChhhh
Q 020320 140 GFKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYG-ASHVVATTSTPKVEFVK----ELGAD-KV-IDYRK---TKYEDI 209 (327)
Q Consensus 140 ~l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g-~~~v~~~~~~~~~~~~~----~~g~~-~v-~~~~~---~~~~~~ 209 (327)
.+...++.||++|+=.| .+.|.++..+++..+. -+++.....+++.+.++ ..|.+ .+ +...+ +.+...
T Consensus 32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~ 109 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEE 109 (247)
T ss_dssp HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT
T ss_pred HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceeccccccc
Confidence 34578999999999887 4456677788887732 36777778888777663 45543 22 21111 122111
Q ss_pred -ccCccEEE-eCCC---Cchhhhhhh-cCCCcEEEee
Q 020320 210 -EEKFDVLY-DTIG---DCKNSFVVA-KDNAPIVDIT 240 (327)
Q Consensus 210 -~~~~d~v~-d~~g---~~~~~~~~l-~~~g~~v~~g 240 (327)
...+|.|| |.-. .+..+...| +++|+++.+.
T Consensus 110 ~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 110 LESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp -TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred ccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 24688887 6554 347788899 8999998883
No 488
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=89.57 E-value=2.2 Score=37.41 Aligned_cols=65 Identities=18% Similarity=0.145 Sum_probs=45.9
Q ss_pred EEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcCCCEEEeCCCCChhhhccCccEEEeCCC
Q 020320 151 TIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELGADKVIDYRKTKYEDIEEKFDVLYDTIG 221 (327)
Q Consensus 151 ~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~v~d~~g 221 (327)
+|.|+| .|.+|...+..++.. |.++++.++++++.+.+.+.|.-... ..+. +....+|++|-|+.
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~~-~~~~~aDlVilavp 66 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIERGLVDEA---STDL-SLLKDCDLVILALP 66 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCcccc---cCCH-hHhcCCCEEEEcCC
Confidence 588999 899998887777766 88888888888888877777642111 1111 23456788888876
No 489
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=89.53 E-value=3.8 Score=36.11 Aligned_cols=141 Identities=21% Similarity=0.255 Sum_probs=76.0
Q ss_pred CCCCCEEEEecccccccCcCCCCCceeeEEEeeccceecCCCCCCHHhhcccchHHHHHHH--HHHhcCCCCCCEEEEEc
Q 020320 79 FNTGDEVYGNIQDFNAEGKLKQLGALAEFIVVEESLIAKKPKNISFEEAASLPLAVQTAIE--GFKTAGFKTGQTIFIVG 156 (327)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~--~l~~~~~~~~~~vlI~g 156 (327)
.++|+|.+..+ +|.+|..-.....+++.+++.+-.. ....|.+. +++ .-.++|++++=+|
T Consensus 109 ~rig~~f~I~P-------------sw~~~~~~~~~~~i~lDPGlAFGTG----~HpTT~lcL~~Le-~~~~~g~~vlDvG 170 (300)
T COG2264 109 VRIGERFVIVP-------------SWREYPEPSDELNIELDPGLAFGTG----THPTTSLCLEALE-KLLKKGKTVLDVG 170 (300)
T ss_pred EEeeeeEEECC-------------CCccCCCCCCceEEEEccccccCCC----CChhHHHHHHHHH-HhhcCCCEEEEec
Confidence 66777766543 3444322223566677666543222 22222322 222 2345889998888
Q ss_pred CCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHH----cCCCEEEeCCCCChhh-hc-cCccEEEeCC-CCc-----
Q 020320 157 GAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKE----LGADKVIDYRKTKYED-IE-EKFDVLYDTI-GDC----- 223 (327)
Q Consensus 157 a~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~-~~-~~~d~v~d~~-g~~----- 223 (327)
|| .|..++..+| + |++ +++++-.+-..+.+++ .+.+............ .. +.+|+++.+. ..+
T Consensus 171 -cG-SGILaIAa~k-L-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La 246 (300)
T COG2264 171 -CG-SGILAIAAAK-L-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELA 246 (300)
T ss_pred -CC-hhHHHHHHHH-c-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHH
Confidence 54 5878887777 4 665 5555555555544433 3333111000011111 11 4799999665 322
Q ss_pred hhhhhhhcCCCcEEEeeC
Q 020320 224 KNSFVVAKDNAPIVDITW 241 (327)
Q Consensus 224 ~~~~~~l~~~g~~v~~g~ 241 (327)
+.....++|+|.++..|.
T Consensus 247 ~~~~~~lkpgg~lIlSGI 264 (300)
T COG2264 247 PDIKRLLKPGGRLILSGI 264 (300)
T ss_pred HHHHHHcCCCceEEEEee
Confidence 567788999999988874
No 490
>PLN02583 cinnamoyl-CoA reductase
Probab=89.51 E-value=0.93 Score=40.07 Aligned_cols=36 Identities=14% Similarity=0.241 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCc
Q 020320 148 TGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTST 184 (327)
Q Consensus 148 ~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~ 184 (327)
++++|+|+||+|.+|..++..+... |.+++++.++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~-G~~V~~~~R~~ 40 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSR-GYTVHAAVQKN 40 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEEcCc
Confidence 5678999999999999988888877 89998888753
No 491
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=89.49 E-value=7.4 Score=32.40 Aligned_cols=96 Identities=18% Similarity=0.112 Sum_probs=57.1
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHH----HcCCCEE--EeCCCCChhhhccCcc
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVK----ELGADKV--IDYRKTKYEDIEEKFD 214 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~~~d 214 (327)
+...+++++++||-.| +|. |..+..+++.. .+++.++.+++..+.++ +.+.+.+ ...+..........+|
T Consensus 71 ~~~l~~~~~~~VLeiG-~Gs-G~~t~~la~~~--~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 146 (212)
T PRK00312 71 TELLELKPGDRVLEIG-TGS-GYQAAVLAHLV--RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFD 146 (212)
T ss_pred HHhcCCCCCCEEEEEC-CCc-cHHHHHHHHHh--CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCCcCCCcC
Confidence 4567788999999998 443 44555566643 46777777777655553 3444322 2221111111124689
Q ss_pred EEEeCCC--C-chhhhhhhcCCCcEEEee
Q 020320 215 VLYDTIG--D-CKNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 215 ~v~d~~g--~-~~~~~~~l~~~g~~v~~g 240 (327)
+++-... . .......|+++|+++..-
T Consensus 147 ~I~~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 147 RILVTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred EEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence 8885433 2 255678899999987653
No 492
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=89.36 E-value=1.1 Score=39.46 Aligned_cols=91 Identities=27% Similarity=0.321 Sum_probs=52.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhhcCCc-EEEEeCCcccHHHHHH----cCC-CEEEeCCCCChhhhccCccEEEeC
Q 020320 146 FKTGQTIFIVGGAGGVGTLVIQLAKHFYGAS-HVVATTSTPKVEFVKE----LGA-DKVIDYRKTKYEDIEEKFDVLYDT 219 (327)
Q Consensus 146 ~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~-~v~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~~d~v~d~ 219 (327)
..+|++||=+| || .|.+++..+| + |++ +++++.++...+.+++ .|. +.+.-....+.. ...+|+|+..
T Consensus 159 ~~~g~~vLDvG-~G-SGILaiaA~k-l-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~--~~~~dlvvAN 232 (295)
T PF06325_consen 159 VKPGKRVLDVG-CG-SGILAIAAAK-L-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV--EGKFDLVVAN 232 (295)
T ss_dssp SSTTSEEEEES--T-TSHHHHHHHH-T-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC--CS-EEEEEEE
T ss_pred ccCCCEEEEeC-Cc-HHHHHHHHHH-c-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc--cccCCEEEEC
Confidence 56788998887 44 4666766666 4 665 5566666665555533 232 222111111111 1679999966
Q ss_pred CC-Cc-----hhhhhhhcCCCcEEEeeCC
Q 020320 220 IG-DC-----KNSFVVAKDNAPIVDITWP 242 (327)
Q Consensus 220 ~g-~~-----~~~~~~l~~~g~~v~~g~~ 242 (327)
.- .. +...+.++++|.++..|..
T Consensus 233 I~~~vL~~l~~~~~~~l~~~G~lIlSGIl 261 (295)
T PF06325_consen 233 ILADVLLELAPDIASLLKPGGYLILSGIL 261 (295)
T ss_dssp S-HHHHHHHHHHCHHHEEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhhCCCCEEEEcccc
Confidence 53 21 5566788999998887743
No 493
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=89.34 E-value=0.61 Score=39.08 Aligned_cols=45 Identities=27% Similarity=0.433 Sum_probs=36.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHHcC
Q 020320 149 GQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKELG 194 (327)
Q Consensus 149 ~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~~g 194 (327)
|++++++|++|++|+.....+-.. |+++.+++.+.|+.+...+|.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~k-gik~~~i~~~~En~~a~akL~ 49 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEK-GIKVLVIDDSEENPEAIAKLQ 49 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHc-CchheeehhhhhCHHHHHHHh
Confidence 899999999999999987777767 999999987777665555543
No 494
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=89.33 E-value=0.88 Score=40.30 Aligned_cols=89 Identities=21% Similarity=0.324 Sum_probs=61.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHH-HHcCCCEEE-eCC-CCChhhhccCccEEEeCCCCc---
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFV-KELGADKVI-DYR-KTKYEDIEEKFDVLYDTIGDC--- 223 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~-~~~g~~~v~-~~~-~~~~~~~~~~~d~v~d~~g~~--- 223 (327)
..++|+||+|=.|...+..+++. |.+-..+-+|..|+..+ .++|.+... .-. .........++++|++|+|..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~-g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~~ 85 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLARE-GLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTRY 85 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHc-CCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccccc
Confidence 45789999999999999999988 88887777898888766 568854432 111 122233457899999999943
Q ss_pred --hhhhhhhcCCCcEEEe
Q 020320 224 --KNSFVVAKDNAPIVDI 239 (327)
Q Consensus 224 --~~~~~~l~~~g~~v~~ 239 (327)
.....|.+.+-.++.+
T Consensus 86 g~plv~aC~~~GTdY~Di 103 (382)
T COG3268 86 GEPLVAACAAAGTDYADI 103 (382)
T ss_pred ccHHHHHHHHhCCCeeec
Confidence 3344566555555554
No 495
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=89.29 E-value=2 Score=38.95 Aligned_cols=90 Identities=14% Similarity=0.142 Sum_probs=50.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccH-HHHHHcC-CCEE--EeCCCCChhhhccCccEEEeCCCCc--
Q 020320 150 QTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKV-EFVKELG-ADKV--IDYRKTKYEDIEEKFDVLYDTIGDC-- 223 (327)
Q Consensus 150 ~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~-~~~~~~g-~~~v--~~~~~~~~~~~~~~~d~v~d~~g~~-- 223 (327)
.+|.|.|++|.+|...+.++....+.+++.+.+..++. .+.+..+ .... ....+.+.. ...++|+||-|++..
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~-~~~~vD~Vf~alP~~~~ 81 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE-ILAGADVVFLALPHGVS 81 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH-HhcCCCEEEECCCcHHH
Confidence 47899999999999888877776566766666533222 2222222 1100 011111111 335799999998743
Q ss_pred -hhhhhhhcCCCcEEEee
Q 020320 224 -KNSFVVAKDNAPIVDIT 240 (327)
Q Consensus 224 -~~~~~~l~~~g~~v~~g 240 (327)
+.+..+++.+-.+++.+
T Consensus 82 ~~~v~~a~~aG~~VID~S 99 (343)
T PRK00436 82 MDLAPQLLEAGVKVIDLS 99 (343)
T ss_pred HHHHHHHHhCCCEEEECC
Confidence 33444555555666664
No 496
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.29 E-value=4.1 Score=35.91 Aligned_cols=96 Identities=18% Similarity=0.165 Sum_probs=63.8
Q ss_pred ccchHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHhhc---CCcEEEEeCCcccHHHHHHcCCCEEEeCCCC
Q 020320 129 SLPLAVQTAIEGFKTAG-FKTGQTIFIVGGAGGVGTLVIQLAKHFY---GASHVVATTSTPKVEFVKELGADKVIDYRKT 204 (327)
Q Consensus 129 ~~~~~~~ta~~~l~~~~-~~~~~~vlI~ga~g~~G~~a~~la~~~~---g~~~v~~~~~~~~~~~~~~~g~~~v~~~~~~ 204 (327)
++|++....+..++..+ --.|++++|.|.+..+|.=.+.++...+ ++.+. ++- ++..
T Consensus 140 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVt-v~h------------------s~T~ 200 (297)
T PRK14168 140 FLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVT-IVH------------------TRSK 200 (297)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEE-Eec------------------CCCc
Confidence 44665544555555544 3579999999999999988888887651 23222 221 1223
Q ss_pred ChhhhccCccEEEeCCCCch-hhhhhhcCCCcEEEeeCCC
Q 020320 205 KYEDIEEKFDVLYDTIGDCK-NSFVVAKDNAPIVDITWPP 243 (327)
Q Consensus 205 ~~~~~~~~~d~v~d~~g~~~-~~~~~l~~~g~~v~~g~~~ 243 (327)
+.....+.+|+++-++|... -.-..++++..++.+|...
T Consensus 201 ~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gavVIDvGin~ 240 (297)
T PRK14168 201 NLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNR 240 (297)
T ss_pred CHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEecCCCc
Confidence 34445577999999999663 3446788999999998654
No 497
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=89.21 E-value=1.8 Score=36.37 Aligned_cols=70 Identities=23% Similarity=0.333 Sum_probs=45.7
Q ss_pred EEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcccHHHHHH-cCCCEE-EeCCCC-Chhhhcc--CccEEEeCCCC
Q 020320 152 IFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTPKVEFVKE-LGADKV-IDYRKT-KYEDIEE--KFDVLYDTIGD 222 (327)
Q Consensus 152 vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~~~~~~~~-~g~~~v-~~~~~~-~~~~~~~--~~d~v~d~~g~ 222 (327)
|||+||+|-+|..++..+... |..++...+++.+...... .....+ .|-.+. .+.+... .+|.||.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK-GHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHc-CCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 799999999999999999988 8888877776665544433 232222 122221 1222222 56999998874
No 498
>PRK11761 cysM cysteine synthase B; Provisional
Probab=89.15 E-value=3.5 Score=36.47 Aligned_cols=59 Identities=19% Similarity=0.233 Sum_probs=45.5
Q ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeC---CcccHHHHHHcCCCEEEeC
Q 020320 141 FKTAGFKTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATT---STPKVEFVKELGADKVIDY 201 (327)
Q Consensus 141 l~~~~~~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~---~~~~~~~~~~~g~~~v~~~ 201 (327)
.+...+.++++|+.. .+|..|++++.+|+.+ |.+.+++.. ++.+.+.++.+|++.++..
T Consensus 55 ~~~g~~~~g~~vv~a-SsGN~g~alA~~a~~~-G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~ 116 (296)
T PRK11761 55 EKRGEIKPGDTLIEA-TSGNTGIALAMIAAIK-GYRMKLIMPENMSQERRAAMRAYGAELILVP 116 (296)
T ss_pred HHcCCCCCCCEEEEe-CCChHHHHHHHHHHHc-CCCEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence 345556777776554 5999999999999998 998888874 4567888889998876544
No 499
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=89.12 E-value=2.3 Score=42.17 Aligned_cols=74 Identities=19% Similarity=0.355 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHhhcCCcEEEEeCCcc---------------------cHHHHHHcCCCEEEeCCC--
Q 020320 147 KTGQTIFIVGGAGGVGTLVIQLAKHFYGASHVVATTSTP---------------------KVEFVKELGADKVIDYRK-- 203 (327)
Q Consensus 147 ~~~~~vlI~ga~g~~G~~a~~la~~~~g~~~v~~~~~~~---------------------~~~~~~~~g~~~v~~~~~-- 203 (327)
..+++|+|+| +|+.|+.++..+... |.++.++...+. ..+.++++|.+..++..-
T Consensus 191 ~~~k~VaIIG-aGpAGl~aA~~La~~-G~~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~ 268 (652)
T PRK12814 191 KSGKKVAIIG-AGPAGLTAAYYLLRK-GHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGR 268 (652)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCcEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccC
Confidence 4578999999 899999999999988 888888875432 134446677665443321
Q ss_pred -CChhhhccCccEEEeCCCC
Q 020320 204 -TKYEDIEEKFDVLYDTIGD 222 (327)
Q Consensus 204 -~~~~~~~~~~d~v~d~~g~ 222 (327)
.........+|.+|-++|+
T Consensus 269 dv~~~~~~~~~DaVilAtGa 288 (652)
T PRK12814 269 DITLEELQKEFDAVLLAVGA 288 (652)
T ss_pred ccCHHHHHhhcCEEEEEcCC
Confidence 1122222358999988884
No 500
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=89.06 E-value=0.94 Score=40.25 Aligned_cols=37 Identities=30% Similarity=0.399 Sum_probs=30.3
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHhhcCCcEEEEeCCccc
Q 020320 148 TGQTIFIVGG--AGGVGTLVIQLAKHFYGASHVVATTSTPK 186 (327)
Q Consensus 148 ~~~~vlI~ga--~g~~G~~a~~la~~~~g~~~v~~~~~~~~ 186 (327)
.|+++||+|+ ++++|.++++.+... |+++++ .+..++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~-Ga~Vv~-~~~~~~ 46 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAA-GAEILV-GTWVPA 46 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHC-CCEEEE-EeCcch
Confidence 5889999998 699999999888888 999888 444333
Done!