Query 020322
Match_columns 327
No_of_seqs 275 out of 1651
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 08:48:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020322.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020322hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 1.2E-82 2.5E-87 552.8 26.5 323 5-327 21-360 (369)
2 PLN03158 methionine aminopepti 100.0 4E-76 8.6E-81 554.4 31.2 324 4-327 21-381 (396)
3 COG0024 Map Methionine aminope 100.0 3.5E-60 7.7E-65 417.0 28.4 244 83-326 4-251 (255)
4 PRK12897 methionine aminopepti 100.0 3.1E-59 6.7E-64 419.6 29.0 245 82-326 2-247 (248)
5 PRK07281 methionine aminopepti 100.0 1.5E-58 3.2E-63 420.2 29.7 246 82-327 2-280 (286)
6 PRK12318 methionine aminopepti 100.0 1.1E-57 2.3E-62 416.9 32.3 249 79-327 37-289 (291)
7 PRK12896 methionine aminopepti 100.0 2.5E-57 5.5E-62 409.2 29.8 248 80-327 6-255 (255)
8 TIGR00500 met_pdase_I methioni 100.0 4.1E-57 9E-62 405.9 29.8 245 83-327 2-247 (247)
9 PRK05716 methionine aminopepti 100.0 3.8E-56 8.3E-61 400.8 29.4 246 82-327 3-249 (252)
10 PRK09795 aminopeptidase; Provi 100.0 3.4E-53 7.4E-58 400.2 25.4 226 77-327 120-351 (361)
11 PRK14575 putative peptidase; P 100.0 3.4E-53 7.4E-58 405.0 25.4 226 76-327 170-398 (406)
12 cd01086 MetAP1 Methionine Amin 100.0 2.3E-52 5.1E-57 373.1 28.5 237 90-326 1-238 (238)
13 TIGR02993 ectoine_eutD ectoine 100.0 1.3E-52 2.8E-57 399.7 23.6 228 76-327 150-383 (391)
14 PRK14576 putative endopeptidas 100.0 2.7E-52 5.9E-57 398.7 23.1 225 77-327 170-397 (405)
15 COG0006 PepP Xaa-Pro aminopept 100.0 1.5E-51 3.2E-56 392.2 24.1 225 77-326 147-375 (384)
16 PRK10879 proline aminopeptidas 100.0 1.2E-50 2.5E-55 390.4 25.8 233 78-326 167-419 (438)
17 PRK15173 peptidase; Provisiona 100.0 1.2E-50 2.6E-55 376.2 25.0 227 75-327 86-315 (323)
18 cd01090 Creatinase Creatine am 100.0 1.3E-49 2.8E-54 352.4 25.8 224 90-326 1-228 (228)
19 cd01087 Prolidase Prolidase. E 100.0 2.9E-49 6.2E-54 354.2 25.2 223 90-326 1-243 (243)
20 PRK13607 proline dipeptidase; 100.0 1.2E-47 2.5E-52 368.9 21.4 243 77-326 154-438 (443)
21 cd01092 APP-like Similar to Pr 100.0 1.5E-45 3.2E-50 322.3 25.1 207 90-321 1-208 (208)
22 TIGR00495 crvDNA_42K 42K curve 100.0 3.7E-44 8.1E-49 338.4 28.5 244 82-326 11-336 (389)
23 cd01085 APP X-Prolyl Aminopept 100.0 3.3E-44 7.2E-49 316.6 23.6 209 91-323 5-221 (224)
24 cd01091 CDC68-like Related to 100.0 8E-44 1.7E-48 317.6 23.2 226 90-326 1-243 (243)
25 PF00557 Peptidase_M24: Metall 100.0 3.5E-43 7.5E-48 307.3 23.0 204 91-318 1-207 (207)
26 PRK08671 methionine aminopepti 100.0 1.6E-42 3.5E-47 317.4 27.3 227 89-326 1-291 (291)
27 PTZ00053 methionine aminopepti 100.0 1.5E-42 3.3E-47 329.4 26.7 237 81-326 149-466 (470)
28 TIGR00501 met_pdase_II methion 100.0 1.2E-41 2.7E-46 311.8 26.9 229 87-326 2-295 (295)
29 cd01089 PA2G4-like Related to 100.0 1.2E-41 2.5E-46 302.0 24.4 214 90-326 1-228 (228)
30 cd01066 APP_MetAP A family inc 100.0 1.2E-41 2.6E-46 296.0 23.9 206 90-321 1-207 (207)
31 cd01088 MetAP2 Methionine Amin 100.0 2.4E-41 5.2E-46 309.6 26.5 226 90-326 1-291 (291)
32 KOG2414 Putative Xaa-Pro amino 100.0 1.6E-42 3.6E-47 313.8 16.7 232 77-326 221-471 (488)
33 KOG2737 Putative metallopeptid 100.0 3.2E-39 6.9E-44 289.7 14.9 248 75-326 176-466 (492)
34 KOG1189 Global transcriptional 99.9 1.8E-26 3.9E-31 222.3 16.7 241 69-327 122-378 (960)
35 KOG2413 Xaa-Pro aminopeptidase 99.9 1.7E-24 3.6E-29 206.1 15.7 227 75-323 298-538 (606)
36 KOG2775 Metallopeptidase [Gene 99.9 7.5E-21 1.6E-25 166.7 17.2 232 86-326 81-393 (397)
37 KOG2776 Metallopeptidase [Gene 99.8 4.8E-18 1.1E-22 152.7 18.5 243 82-326 13-339 (398)
38 COG5406 Nucleosome binding fac 99.8 6E-18 1.3E-22 161.0 14.7 237 75-327 161-418 (1001)
39 cd01086 MetAP1 Methionine Amin 97.7 0.00056 1.2E-08 60.8 11.3 99 197-318 2-105 (238)
40 PLN03158 methionine aminopepti 97.6 0.00051 1.1E-08 65.6 10.8 115 181-318 126-247 (396)
41 cd01066 APP_MetAP A family inc 97.3 0.0048 1E-07 52.8 12.3 102 91-194 102-204 (207)
42 PRK05716 methionine aminopepti 97.3 0.0027 5.9E-08 56.9 11.0 101 198-317 13-114 (252)
43 cd01088 MetAP2 Methionine Amin 97.3 0.003 6.4E-08 58.1 10.8 97 197-318 2-100 (291)
44 PRK12896 methionine aminopepti 97.2 0.0032 6.9E-08 56.6 10.6 110 186-318 4-120 (255)
45 cd01092 APP-like Similar to Pr 97.1 0.0086 1.9E-07 51.8 11.9 100 91-193 103-204 (208)
46 COG0024 Map Methionine aminope 97.1 0.0057 1.2E-07 54.7 10.7 86 198-285 13-101 (255)
47 TIGR00500 met_pdase_I methioni 97.0 0.014 3.1E-07 52.1 12.2 102 92-194 117-238 (247)
48 PRK15173 peptidase; Provisiona 96.8 0.017 3.7E-07 53.9 12.0 102 92-194 203-306 (323)
49 PRK12897 methionine aminopepti 96.8 0.016 3.4E-07 52.0 10.7 101 93-194 119-239 (248)
50 PRK14575 putative peptidase; P 96.7 0.024 5.3E-07 54.6 12.0 101 92-194 286-389 (406)
51 PF00557 Peptidase_M24: Metall 96.7 0.028 6.2E-07 48.6 11.4 98 197-317 1-99 (207)
52 cd01090 Creatinase Creatine am 96.6 0.038 8.3E-07 48.9 12.1 100 92-194 110-220 (228)
53 PRK14576 putative endopeptidas 96.6 0.03 6.6E-07 53.9 12.3 103 91-194 284-388 (405)
54 TIGR00495 crvDNA_42K 42K curve 96.6 0.027 5.8E-07 53.9 11.4 103 198-318 21-130 (389)
55 PRK12318 methionine aminopepti 96.5 0.032 7E-07 51.3 11.4 88 92-180 159-247 (291)
56 cd01091 CDC68-like Related to 96.5 0.034 7.4E-07 49.7 11.1 102 91-194 119-234 (243)
57 PRK07281 methionine aminopepti 96.5 0.03 6.6E-07 51.3 10.8 101 92-193 149-270 (286)
58 PRK08671 methionine aminopepti 96.5 0.062 1.4E-06 49.4 12.7 95 92-193 102-205 (291)
59 PRK09795 aminopeptidase; Provi 96.4 0.056 1.2E-06 51.3 12.7 104 87-193 236-341 (361)
60 TIGR02993 ectoine_eutD ectoine 96.3 0.044 9.6E-07 52.6 11.3 101 92-194 271-374 (391)
61 TIGR00501 met_pdase_II methion 96.3 0.061 1.3E-06 49.6 11.7 95 198-318 7-104 (295)
62 KOG2738 Putative methionine am 96.1 0.032 7E-07 50.3 8.3 85 198-285 124-211 (369)
63 cd01087 Prolidase Prolidase. E 96.1 0.082 1.8E-06 47.1 11.1 102 92-194 104-235 (243)
64 cd01089 PA2G4-like Related to 96.0 0.11 2.4E-06 45.9 11.5 103 198-318 3-112 (228)
65 COG0006 PepP Xaa-Pro aminopept 95.3 0.25 5.4E-06 47.2 11.7 97 93-194 264-367 (384)
66 PTZ00053 methionine aminopepti 95.2 0.17 3.7E-06 49.3 10.5 96 199-317 161-262 (470)
67 PRK10879 proline aminopeptidas 93.6 0.96 2.1E-05 44.1 11.6 102 93-194 284-411 (438)
68 cd01085 APP X-Prolyl Aminopept 91.4 4.7 0.0001 35.5 12.2 97 96-194 116-216 (224)
69 PRK13607 proline dipeptidase; 90.4 3.2 6.9E-05 40.6 11.1 41 94-134 271-315 (443)
70 KOG2776 Metallopeptidase [Gene 87.4 3 6.4E-05 39.0 7.9 93 198-319 23-133 (398)
71 KOG2775 Metallopeptidase [Gene 85.3 7.9 0.00017 35.4 9.2 84 197-285 86-175 (397)
72 PF01321 Creatinase_N: Creatin 67.5 1.4 2.9E-05 34.6 -0.7 30 3-32 13-42 (132)
73 PLN03144 Carbon catabolite rep 63.8 1.5 3.3E-05 44.3 -1.3 31 5-35 76-109 (606)
74 cd01666 TGS_DRG_C TGS_DRG_C: 63.8 26 0.00056 25.2 5.5 52 111-173 21-73 (75)
75 KOG1189 Global transcriptional 59.4 44 0.00096 34.6 8.0 101 93-194 259-368 (960)
76 PF00254 FKBP_C: FKBP-type pep 53.7 21 0.00045 26.2 3.8 51 162-221 2-59 (94)
77 PF07305 DUF1454: Protein of u 51.3 1.2E+02 0.0025 26.0 8.0 75 196-283 114-188 (200)
78 PF05184 SapB_1: Saposin-like 49.4 33 0.00072 20.6 3.6 34 96-129 3-36 (39)
79 COG5406 Nucleosome binding fac 48.3 69 0.0015 32.6 7.2 83 87-177 298-385 (1001)
80 PF09506 Salt_tol_Pase: Glucos 40.9 1E+02 0.0022 28.9 6.6 130 85-215 97-282 (381)
81 PF12631 GTPase_Cys_C: Catalyt 40.2 73 0.0016 22.5 4.7 42 195-236 10-51 (73)
82 TIGR02399 salt_tol_Pase glucos 38.4 1.1E+02 0.0024 28.7 6.6 52 85-136 103-154 (389)
83 PF10415 FumaraseC_C: Fumarase 37.1 42 0.0009 22.5 2.8 34 92-125 10-48 (55)
84 PRK01490 tig trigger factor; P 33.6 1.5E+02 0.0033 28.7 7.3 56 115-194 132-191 (435)
85 PF02829 3H: 3H domain; Inter 30.9 95 0.0021 23.5 4.2 67 172-240 24-97 (98)
86 PF06135 DUF965: Bacterial pro 28.7 50 0.0011 23.9 2.2 39 222-263 16-54 (79)
87 TIGR00115 tig trigger factor. 28.5 2.9E+02 0.0062 26.5 8.1 57 115-194 120-180 (408)
88 cd04938 TGS_Obg-like TGS_Obg-l 27.7 99 0.0021 22.1 3.6 47 111-173 28-74 (76)
89 PF03477 ATP-cone: ATP cone do 24.6 60 0.0013 23.6 2.1 35 99-133 40-74 (90)
90 COG0414 PanC Panthothenate syn 24.3 1.9E+02 0.0042 26.3 5.5 52 185-239 186-238 (285)
91 PF04355 SmpA_OmlA: SmpA / Oml 24.3 56 0.0012 22.7 1.8 19 106-124 7-25 (71)
92 KOG2611 Neurochondrin/leucine- 23.4 33 0.00072 33.7 0.6 69 168-236 584-662 (698)
93 PRK05473 hypothetical protein; 23.3 68 0.0015 23.6 2.1 38 223-263 20-57 (86)
94 TIGR03147 cyt_nit_nrfF cytochr 22.4 1.2E+02 0.0026 24.2 3.5 28 98-125 57-84 (126)
95 COG0544 Tig FKBP-type peptidyl 21.8 1.9E+02 0.0042 28.3 5.5 44 115-182 132-175 (441)
96 TIGR03516 ppisom_GldI peptidyl 21.3 2.1E+02 0.0046 24.1 5.1 54 161-223 82-141 (177)
97 PF07308 DUF1456: Protein of u 20.9 1.2E+02 0.0027 21.2 2.9 38 89-126 4-41 (68)
98 PF00249 Myb_DNA-binding: Myb- 20.4 1.8E+02 0.0039 18.3 3.5 42 85-126 4-46 (48)
99 PRK06646 DNA polymerase III su 20.3 4.4E+02 0.0095 21.7 6.6 40 91-131 13-52 (154)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-82 Score=552.80 Aligned_cols=323 Identities=55% Similarity=0.941 Sum_probs=302.4
Q ss_pred cccccccccccc-ccccCceecccccccccccc-----ccCCC-----CCCCCCCccccccCCCCCCCCCCCCCCCCCCC
Q 020322 5 ACSLQLQPRLLS-SFVGNRFIHSTQPLNQLFGY-----NSDAE-----PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQ 73 (327)
Q Consensus 5 ~~~~~~~~~~~~-~~tg~~~~~~~~~~~~l~~~-----~~e~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (327)
-||.|+|..--. |||...++..+|..++.++. ..+.. .+.|.++++||.++|++.||++|++|+|+..+
T Consensus 21 ~Cp~c~~~~i~~~~fc~q~cf~~~w~~hK~~h~~~~~~~~~g~~~p~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g 100 (369)
T KOG2738|consen 21 QCPTCLKLGIKSAYFCAQECFKNSWLSHKKLHRKALRIRKEGQYNPWPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSG 100 (369)
T ss_pred cCchhhhcCCCcccccCchhhhcchhhhhhhcccchhhhhhccCCCCccccccCCccccCCCCCCcCCccCCCCchhhcC
Confidence 599999888776 99999999999999996664 11111 18889999999999999999999999999985
Q ss_pred C----CCCCCC-CCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeee
Q 020322 74 K----PIGIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC 148 (327)
Q Consensus 74 ~----~~~~~~-~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 148 (327)
. .+.... ...|+++++|+.||+||++++++++.+..+++||+|++||++.++.+++++|+|||+|||.+||+++|
T Consensus 101 ~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~C 180 (369)
T KOG2738|consen 101 VSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVC 180 (369)
T ss_pred CcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhh
Confidence 4 223322 35689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcccCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhH
Q 020322 149 TSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGK 228 (327)
Q Consensus 149 ~g~n~~~~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~ 228 (327)
+|+|+++|||+|+.|+|++||+|+||+..+++|||+|+++||++|+++++.++|.+.++++++.+|+.+|||+++++|++
T Consensus 181 TSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~ 260 (369)
T KOG2738|consen 181 TSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGN 260 (369)
T ss_pred cchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCceecceeeeecccccccCCccccccC-CCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCcee
Q 020322 229 TIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN-NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLS 307 (327)
Q Consensus 229 ~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~-~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g 307 (327)
.|++.+.++||++++.++|||||.-||..|.|.+|.+ ....+|++||+|||||+|..|..+..+|+|+||.+|.||..+
T Consensus 261 iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~s 340 (369)
T KOG2738|consen 261 IIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRS 340 (369)
T ss_pred HHHHHhhhcCceeehhhhccccccccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCcee
Confidence 9999999999999999999999999999999999955 578899999999999999999999999999999999999999
Q ss_pred EEEeEEEEEcCCCeEecCCC
Q 020322 308 AQFEHTILITRDGAEILTQC 327 (327)
Q Consensus 308 ~~~EdtvlVt~~G~e~LT~~ 327 (327)
+|||||+|||++|+|+||++
T Consensus 341 AQFEhTlLVT~tG~EILT~r 360 (369)
T KOG2738|consen 341 AQFEHTLLVTETGCEILTKR 360 (369)
T ss_pred cceeeEEEEecccceehhcc
Confidence 99999999999999999975
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=4e-76 Score=554.44 Aligned_cols=324 Identities=45% Similarity=0.782 Sum_probs=301.0
Q ss_pred Ccccccccccc---ccccccCceeccccccccccccccC-------------C------------C---CCCCCCCcccc
Q 020322 4 GACSLQLQPRL---LSSFVGNRFIHSTQPLNQLFGYNSD-------------A------------E---PNRRRKRLRPG 52 (327)
Q Consensus 4 ~~~~~~~~~~~---~~~~tg~~~~~~~~~~~~l~~~~~e-------------~------------~---~~~~~~~~~~~ 52 (327)
-.||+|+|..- -+|||++.||...|+.++.++.... . . .|.|++++|||
T Consensus 21 l~Cp~C~k~~~~~~~s~fCsq~CFk~~w~~Hk~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (396)
T PLN03158 21 LQCPKCLELKLPREGASFCSQDCFKAAWSSHKSVHTKAKLSSIGQNSDAPAEGWLYCLKKGQARTSKLPDFDWTGPLRPY 100 (396)
T ss_pred ccCccchhcCCCCCCceeECHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccCCCCCCCCCcccccC
Confidence 36999999875 5999999999999999986663211 0 1 17788999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH
Q 020322 53 KVSPHRPVPDHIPRPPYVNSQK-----PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM 127 (327)
Q Consensus 53 ~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~ 127 (327)
.+||++.+|++|++|+|+..+. ...+.+.|+|||++||+.||+|+++++++++++.+.++||+||.||++++++.
T Consensus 101 ~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~ 180 (396)
T PLN03158 101 PISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEA 180 (396)
T ss_pred CCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Confidence 9999999999999999998753 23456789999999999999999999999999999999999999999999999
Q ss_pred HHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHH
Q 020322 128 IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTK 207 (327)
Q Consensus 128 ~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~ 207 (327)
+.++|++|++++|.+||+++|+|.|+.++|++|++++|++||+|++|+++.++||++|++|||++|++++++++++++++
T Consensus 181 ~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~ 260 (396)
T PLN03158 181 TIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTY 260 (396)
T ss_pred HHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceecceeeeecccccccCCcccccc-CCCCccccCCcEEEEcceeecC
Q 020322 208 DCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIG 286 (327)
Q Consensus 208 ~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~-~~~~~~l~~GmvftiEP~i~~~ 286 (327)
++++++++++|||++++||++++++++++.||.++++++|||||+.+||.|.|.++. +....+|+|||||||||+++.+
T Consensus 261 eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g 340 (396)
T PLN03158 261 ECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAG 340 (396)
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCCCCCCcccCCCCCCEecCCcEEEECCeeccC
Confidence 999999999999999999999999999999999999999999999999999998763 3445799999999999999999
Q ss_pred CCCCcccCCCceEEeeCCceeEEEeEEEEEcCCCeEecCCC
Q 020322 287 SINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 327 (327)
Q Consensus 287 ~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~G~e~LT~~ 327 (327)
.....+|+|+||+++.||.+++|||||||||++|+|+||.+
T Consensus 341 ~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~EiLT~~ 381 (396)
T PLN03158 341 VWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTAR 381 (396)
T ss_pred cccceecCCCceEEecCCceeeEeeeEEEEeCCcceECCCC
Confidence 88889999999999999999999999999999999999963
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.5e-60 Score=416.98 Aligned_cols=244 Identities=45% Similarity=0.787 Sum_probs=234.1
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCC-
Q 020322 83 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD- 161 (327)
Q Consensus 83 ~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~- 161 (327)
.+|+++||+.||+|++|++++++.+.+.++||+|..||+..+++.+.++|++|++++|.+||..+|+|.|+.++|++|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 3899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCC-HHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCc
Q 020322 162 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD-DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG 240 (327)
Q Consensus 162 ~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~-~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~ 240 (327)
+++|++||+|+||+|+.++||++|.++||.+|+.+ +..++|.++++++++++|+.+|||+++++|.++++++++++||.
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~ 163 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFS 163 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCE
Confidence 67899999999999999999999999999999766 47777999999999999999999999999999999999999999
Q ss_pred eecceeeeecccccccCCccccccC-CCCccccCCcEEEEcceeecCCCCCcccC-CCceEEeeCCceeEEEeEEEEEcC
Q 020322 241 VVRQFVGHGIGRVFHADPVVLHYRN-NDHGRMVLNQTFTIEPMLTIGSINPVMWD-DNWTIVTEDGSLSAQFEHTILITR 318 (327)
Q Consensus 241 ~~~~~~GHgiG~~~he~p~i~~~~~-~~~~~l~~GmvftiEP~i~~~~~~~~~~~-d~w~~~~~~g~~g~~~EdtvlVt~ 318 (327)
++++++|||||..+|+.|.+.+|.+ +...+|++||||+|||+++.++.....++ |+|+++++|++..+|+||||+||+
T Consensus 164 vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~ 243 (255)
T COG0024 164 VVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTE 243 (255)
T ss_pred EeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeC
Confidence 9999999999999999999999744 44579999999999999999999999888 999999999999999999999999
Q ss_pred CCeEecCC
Q 020322 319 DGAEILTQ 326 (327)
Q Consensus 319 ~G~e~LT~ 326 (327)
+|+|+||.
T Consensus 244 ~g~eilT~ 251 (255)
T COG0024 244 DGCEILTL 251 (255)
T ss_pred CCcEEeeC
Confidence 99999996
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3.1e-59 Score=419.65 Aligned_cols=245 Identities=36% Similarity=0.623 Sum_probs=232.4
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCC
Q 020322 82 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 161 (327)
Q Consensus 82 r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~ 161 (327)
..|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.....++.+|+.++++|.|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 46999999999999999999999999999999999999999999999999998665556789988999999999999999
Q ss_pred CCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCce
Q 020322 162 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 241 (327)
Q Consensus 162 ~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~ 241 (327)
+++|++||+|++|+|+.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.||..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecceeeeecccccccCCccccc-cCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcCCC
Q 020322 242 VRQFVGHGIGRVFHADPVVLHY-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDG 320 (327)
Q Consensus 242 ~~~~~GHgiG~~~he~p~i~~~-~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~G 320 (327)
.++++|||||+.+||.|.+.++ ..+++.+|++||||++||++|.+......+.|+|++.+.||.+|+|+||||+||++|
T Consensus 162 ~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G 241 (248)
T PRK12897 162 ARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDG 241 (248)
T ss_pred CCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCc
Confidence 8899999999999999998754 335678999999999999999988888888999999999999999999999999999
Q ss_pred eEecCC
Q 020322 321 AEILTQ 326 (327)
Q Consensus 321 ~e~LT~ 326 (327)
+|+||+
T Consensus 242 ~e~lt~ 247 (248)
T PRK12897 242 PIILTK 247 (248)
T ss_pred cEEeec
Confidence 999996
No 5
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.5e-58 Score=420.24 Aligned_cols=246 Identities=31% Similarity=0.542 Sum_probs=229.6
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCC----CCCCCeeeecCCCCccc
Q 020322 82 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECICH 157 (327)
Q Consensus 82 r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~----~~~~~~v~~g~n~~~~h 157 (327)
..+||++||++||+|++|++++++++.+.++||+||.||++.+++.+.+.|+.++.+++ .+||+++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 56999999999999999999999999999999999999999999999999998876644 46999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEEee---------------------------eeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHH
Q 020322 158 GIPDSRALEDGDTINIDVTV---------------------------YLNGYHGDTSATFFCGDVDDEARNLVKVTKDCL 210 (327)
Q Consensus 158 ~~p~~~~l~~Gd~v~vd~g~---------------------------~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~ 210 (327)
+.|++++|++||+|++|+|+ .++||++|++|||++|+++++++++|+++++++
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~ 161 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAM 161 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchHHHhHHHHHHHHhCCCceecceeeeecccccccCCccccc-cCCCCccccCCcEEEEcceeecCCCC
Q 020322 211 HKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY-RNNDHGRMVLNQTFTIEPMLTIGSIN 289 (327)
Q Consensus 211 ~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~-~~~~~~~l~~GmvftiEP~i~~~~~~ 289 (327)
+++++++|||++++||++++++++++.||..+.+++|||||+.+||.|.+.++ .++.+.+|++||||+|||++|.+...
T Consensus 162 ~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~ 241 (286)
T PRK07281 162 YRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWE 241 (286)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcc
Confidence 99999999999999999999999999999988899999999999999998654 34667899999999999999997665
Q ss_pred Cc-ccCCCceEEeeCCceeEEEeEEEEEcCCCeEecCCC
Q 020322 290 PV-MWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 327 (327)
Q Consensus 290 ~~-~~~d~w~~~~~~g~~g~~~EdtvlVt~~G~e~LT~~ 327 (327)
+. .++|+|++++.||++|+|+||||+||++|+|+||..
T Consensus 242 ~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~~ 280 (286)
T PRK07281 242 IDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQ 280 (286)
T ss_pred eecccCCCceEEecCCCcEEEeccEEEEeCCcceECCCC
Confidence 44 468999999999999999999999999999999963
No 6
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.1e-57 Score=416.86 Aligned_cols=249 Identities=40% Similarity=0.701 Sum_probs=230.7
Q ss_pred CCCC-ccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCC--CCCCeeeecCCCCc
Q 020322 79 VSGP-EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECI 155 (327)
Q Consensus 79 ~~~r-~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~--~~~~~v~~g~n~~~ 155 (327)
.++| +|||++||++||+|++|++++++++.+.++||+||.||++.+.+.+.+.|+.|+.++|. +|++++++|.|+.+
T Consensus 37 ~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~ 116 (291)
T PRK12318 37 SQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVI 116 (291)
T ss_pred CCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeecccee
Confidence 3345 49999999999999999999999999999999999999999999999999888766664 58889999999999
Q ss_pred ccCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHH
Q 020322 156 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD 235 (327)
Q Consensus 156 ~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~ 235 (327)
+|+.|++++|++||+|++|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||+++++++++
T Consensus 117 ~H~~p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~ 196 (291)
T PRK12318 117 CHGIPNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCAD 196 (291)
T ss_pred ecCCCCCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCceecceeeeecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcc-cCCCceEEeeCCceeEEEeEEE
Q 020322 236 RYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVM-WDDNWTIVTEDGSLSAQFEHTI 314 (327)
Q Consensus 236 ~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~-~~d~w~~~~~~g~~g~~~Edtv 314 (327)
+.|+....+++|||||+.+||.|++.++.++++.+|++||||+|||++|.+...... ..|+|++.++||..++|+||||
T Consensus 197 ~~G~~~~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv 276 (291)
T PRK12318 197 KYGFSVVDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTI 276 (291)
T ss_pred HcCCccCCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEE
Confidence 999987788999999999999999877655677899999999999999987644433 3589999999999999999999
Q ss_pred EEcCCCeEecCCC
Q 020322 315 LITRDGAEILTQC 327 (327)
Q Consensus 315 lVt~~G~e~LT~~ 327 (327)
+||++|+|+||.+
T Consensus 277 ~VTe~G~e~LT~~ 289 (291)
T PRK12318 277 LITETGYEILTLL 289 (291)
T ss_pred EEcCCcceeCCCC
Confidence 9999999999974
No 7
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.5e-57 Score=409.18 Aligned_cols=248 Identities=45% Similarity=0.792 Sum_probs=234.2
Q ss_pred CCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCC
Q 020322 80 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 159 (327)
Q Consensus 80 ~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~ 159 (327)
++++|||++||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.++...+.+||.++++|.|+..+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 45679999999999999999999999999999999999999999999999999988776677899999999999999999
Q ss_pred CCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCC
Q 020322 160 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY 239 (327)
Q Consensus 160 p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~ 239 (327)
|++++|++||+|++|+|+.++||++|++|||++|++++++++++++++++++++++++|||++++||++++++++++.|+
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecceeeeecccccccCCcccc-c-cCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEc
Q 020322 240 GVVRQFVGHGIGRVFHADPVVLH-Y-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 317 (327)
Q Consensus 240 ~~~~~~~GHgiG~~~he~p~i~~-~-~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt 317 (327)
....+++|||||+.+||.|.+.. + .++++.+|++||||+|||+++.+..++..|+|+|++.+++|.+|+|+||||+||
T Consensus 166 ~~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt 245 (255)
T PRK12896 166 SVVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVT 245 (255)
T ss_pred EeccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEc
Confidence 87789999999999999996543 2 245678999999999999999999999999999999999999999999999999
Q ss_pred CCCeEecCCC
Q 020322 318 RDGAEILTQC 327 (327)
Q Consensus 318 ~~G~e~LT~~ 327 (327)
++|+|+||+.
T Consensus 246 ~~G~e~Lt~~ 255 (255)
T PRK12896 246 RDGPEILTDR 255 (255)
T ss_pred CCcceecCCC
Confidence 9999999974
No 8
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=4.1e-57 Score=405.94 Aligned_cols=245 Identities=48% Similarity=0.785 Sum_probs=232.3
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCC
Q 020322 83 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 162 (327)
Q Consensus 83 ~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~ 162 (327)
+|||++||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.+...++.+||.++++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 68999999999999999999999999999999999999999999999999987766677899889999999999999999
Q ss_pred CCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCcee
Q 020322 163 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV 242 (327)
Q Consensus 163 ~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~ 242 (327)
++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.|+...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cceeeeecccccccCCcccccc-CCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcCCCe
Q 020322 243 RQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 321 (327)
Q Consensus 243 ~~~~GHgiG~~~he~p~i~~~~-~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~G~ 321 (327)
.+++|||||+.+||.|.+..+. .+++.+|++||||+|||++|.+.+++..++++|++..++|.+|+|+||||+||++|+
T Consensus 162 ~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~ 241 (247)
T TIGR00500 162 REYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGP 241 (247)
T ss_pred cCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCcc
Confidence 8899999999999999876542 356789999999999999999988888889999999999999999999999999999
Q ss_pred EecCCC
Q 020322 322 EILTQC 327 (327)
Q Consensus 322 e~LT~~ 327 (327)
|+||.+
T Consensus 242 e~Lt~~ 247 (247)
T TIGR00500 242 EILTER 247 (247)
T ss_pred EEccCC
Confidence 999975
No 9
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=3.8e-56 Score=400.84 Aligned_cols=246 Identities=50% Similarity=0.839 Sum_probs=232.9
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCC
Q 020322 82 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 161 (327)
Q Consensus 82 r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~ 161 (327)
..|||++||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|..+...++.+|+.++++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 46999999999999999999999999999999999999999999999999988766566778888999999999999999
Q ss_pred CCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCce
Q 020322 162 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 241 (327)
Q Consensus 162 ~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~ 241 (327)
+++|++||+|++|+++.++||++|++|||++|++++++++++++++++++++++++|||++++||++++++++++.|+..
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~ 162 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV 162 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecceeeeecccccccCCccccc-cCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcCCC
Q 020322 242 VRQFVGHGIGRVFHADPVVLHY-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDG 320 (327)
Q Consensus 242 ~~~~~GHgiG~~~he~p~i~~~-~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~G 320 (327)
..+++|||||+.+||.|.+.++ .++++.+|+|||||+|||++|.+...+..|+|+|++.+++|.+|+++||||+||++|
T Consensus 163 ~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G 242 (252)
T PRK05716 163 VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDG 242 (252)
T ss_pred ecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCc
Confidence 7889999999999999987654 446788999999999999999998888899999999999999999999999999999
Q ss_pred eEecCCC
Q 020322 321 AEILTQC 327 (327)
Q Consensus 321 ~e~LT~~ 327 (327)
+|+||.+
T Consensus 243 ~e~Lt~~ 249 (252)
T PRK05716 243 PEILTLR 249 (252)
T ss_pred cEEeeCC
Confidence 9999974
No 10
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=3.4e-53 Score=400.24 Aligned_cols=226 Identities=21% Similarity=0.349 Sum_probs=210.5
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcc
Q 020322 77 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 156 (327)
Q Consensus 77 ~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~ 156 (327)
.+.++|+|||++||++||+|++|++++++.+.+.++||+||.||++.++..+.+.|+.+ .+|+++|++|.|+..+
T Consensus 120 ~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~~~p 194 (361)
T PRK09795 120 TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEK-----ASFDTIVASGWRGALP 194 (361)
T ss_pred cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCc-----CCCCeEEEEecccccc
Confidence 36778999999999999999999999999999999999999999999999999999976 4688999999999999
Q ss_pred cCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccC--CCHH---HHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHH
Q 020322 157 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGD--VDDE---ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 231 (327)
Q Consensus 157 h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~--~~~~---~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~ 231 (327)
|+.|++++|++||+|++|+|+.|+||++|++|||++|. ++++ ++++|++++++++++++++|||++++||+++++
T Consensus 195 h~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~ 274 (361)
T PRK09795 195 HGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAAR 274 (361)
T ss_pred CCCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999963 3333 789999999999999999999999999999999
Q ss_pred HHHHhCCCce-ecceeeeecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEE
Q 020322 232 DHADRYNYGV-VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQF 310 (327)
Q Consensus 232 ~~~~~~G~~~-~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~ 310 (327)
+++++.||+. +.|.+|||||+++||.|.+.. +++.+|++||||+|||++|.+ +.+|+|+
T Consensus 275 ~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~---~~~~~l~~gmv~~iEpgiy~~-----------------~~~gvri 334 (361)
T PRK09795 275 RVITEAGYGDYFGHNTGHAIGIEVHEDPRFSP---RDTTTLQPGMLLTVEPGIYLP-----------------GQGGVRI 334 (361)
T ss_pred HHHHHcCCCccCCCCCCccCCccccCCCCcCC---CCCCCcCCCCEEEECCEEEeC-----------------CCCEEEE
Confidence 9999999985 678999999999999998864 677899999999999999975 5579999
Q ss_pred eEEEEEcCCCeEecCCC
Q 020322 311 EHTILITRDGAEILTQC 327 (327)
Q Consensus 311 EdtvlVt~~G~e~LT~~ 327 (327)
||||+||++|+|+||++
T Consensus 335 Ed~v~vt~~G~e~Lt~~ 351 (361)
T PRK09795 335 EDVVLVTPQGAEVLYAM 351 (361)
T ss_pred eeEEEECCCCcEeCcCC
Confidence 99999999999999974
No 11
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=3.4e-53 Score=405.02 Aligned_cols=226 Identities=19% Similarity=0.257 Sum_probs=205.3
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCc
Q 020322 76 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 155 (327)
Q Consensus 76 ~~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~ 155 (327)
..+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|.... . +.+++.+|.+ ..
T Consensus 170 ~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~-~~~~v~~G~~-~~ 243 (406)
T PRK14575 170 SIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----S-RFHLISVGAD-FS 243 (406)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----C-cCceEEECCC-cc
Confidence 3456789999999999999999999999999999999999999999999999888876431 1 2245777877 56
Q ss_pred ccCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHH
Q 020322 156 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD 235 (327)
Q Consensus 156 ~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~ 235 (327)
+|+.|+++++++||+|++|+|+.++||++|++|||++|+++++++++|++++++++++++++|||++++||+++++++++
T Consensus 244 ~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~ 323 (406)
T PRK14575 244 PKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIK 323 (406)
T ss_pred cCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCce-ecceeeeeccc--ccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeE
Q 020322 236 RYNYGV-VRQFVGHGIGR--VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEH 312 (327)
Q Consensus 236 ~~G~~~-~~~~~GHgiG~--~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~Ed 312 (327)
+.||.. +.+++|||+|+ .+||.|++.. +++.+|++||||++||++|.+ +.+|+|+||
T Consensus 324 ~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~---~~~~~Le~GMv~tiEpgiy~~-----------------g~gGvriED 383 (406)
T PRK14575 324 KSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSIMIED 383 (406)
T ss_pred HcCCccccCCCCCCcccCCCCCccCCCCCC---CCCCCcCCCCEEEECCeeecC-----------------CCcEEEEEe
Confidence 999974 56889999995 8899999875 567899999999999999973 457999999
Q ss_pred EEEEcCCCeEecCCC
Q 020322 313 TILITRDGAEILTQC 327 (327)
Q Consensus 313 tvlVt~~G~e~LT~~ 327 (327)
||+||++|+|+||++
T Consensus 384 tvlVT~~G~e~LT~~ 398 (406)
T PRK14575 384 MILINKEGIEFLSKL 398 (406)
T ss_pred EEEEcCCCcccCCCC
Confidence 999999999999964
No 12
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.3e-52 Score=373.10 Aligned_cols=237 Identities=54% Similarity=0.944 Sum_probs=224.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 020322 90 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 169 (327)
Q Consensus 90 I~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 169 (327)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+..+++.+|+..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999887777778888889999999999999999999999
Q ss_pred EEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceecceeeee
Q 020322 170 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHG 249 (327)
Q Consensus 170 ~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~~~GHg 249 (327)
+|++|+++.++||++|++|||++|+++++++++++.+.++++++++++|||++++||++++++++++.|+....+++|||
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHg 160 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHG 160 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998778899999
Q ss_pred cccccccCCccccc-cCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcCCCeEecCC
Q 020322 250 IGRVFHADPVVLHY-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 326 (327)
Q Consensus 250 iG~~~he~p~i~~~-~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~G~e~LT~ 326 (327)
||+.+||.|.+..+ .++++.+|++||||++||++|.+..++..|+++|++.+++|.+|+|+||||+||++|+|+||+
T Consensus 161 iG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 161 IGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred CCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 99999999987632 346789999999999999999998888889999999999999999999999999999999995
No 13
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=1.3e-52 Score=399.66 Aligned_cols=228 Identities=18% Similarity=0.230 Sum_probs=200.5
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHC-CCCcCCCCCCCCCCeeeecCCCC
Q 020322 76 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN-GAYPSPLGYGGFPKSVCTSVNEC 154 (327)
Q Consensus 76 ~~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~-g~~~~~~~~~~~~~~v~~g~n~~ 154 (327)
..+.++|+|||++||++||+|++|++++++++.+.++||+||.||++.+.+..... ....+ .+.+|.+++++|.|+.
T Consensus 150 ~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~--~~~~~~~iv~sG~~~a 227 (391)
T TIGR02993 150 ALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGG--DYPAIVPLLPSGADAS 227 (391)
T ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCC--CcCCcccccccCcccc
Confidence 35677899999999999999999999999999999999999999999886554321 11111 1234566788999999
Q ss_pred cccCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHH
Q 020322 155 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 234 (327)
Q Consensus 155 ~~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~ 234 (327)
.+|+.|+++++++||+|++|+++.|+||++|++|||++|+++++++++|+.++++++++++++|||++++||++++++++
T Consensus 228 ~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~ 307 (391)
T TIGR02993 228 APHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVL 307 (391)
T ss_pred CCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCceecceeeeecccccccC-----CccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEE
Q 020322 235 DRYNYGVVRQFVGHGIGRVFHAD-----PVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQ 309 (327)
Q Consensus 235 ~~~G~~~~~~~~GHgiG~~~he~-----p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~ 309 (327)
+++|+.. .|++|||||+.+|+. |.+. ++++.+|++||||+|||++|.+ + .|+|
T Consensus 308 ~~~G~~~-~h~~GhgiGl~~~~~~~e~~~~l~---~~~~~~L~~GMv~tvEpgiy~~-----------------~-~Gvr 365 (391)
T TIGR02993 308 KKYGIHK-DSRTGYPIGLSYPPDWGERTMSLR---PGDNTVLKPGMTFHFMTGLWME-----------------D-WGLE 365 (391)
T ss_pred HHcCCcc-CCCceeeeccCcCCCCCCcccccc---CCCCceecCCCEEEEcceeEeC-----------------C-CCeE
Confidence 9999974 588999999998743 3443 3677899999999999999974 2 4899
Q ss_pred EeEEEEEcCCCeEecCCC
Q 020322 310 FEHTILITRDGAEILTQC 327 (327)
Q Consensus 310 ~EdtvlVt~~G~e~LT~~ 327 (327)
+||||+||++|+|+||.+
T Consensus 366 ied~v~VT~~G~e~Lt~~ 383 (391)
T TIGR02993 366 ITESILITETGVECLSSV 383 (391)
T ss_pred EeeEEEECCCcceecccC
Confidence 999999999999999974
No 14
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=2.7e-52 Score=398.69 Aligned_cols=225 Identities=20% Similarity=0.222 Sum_probs=205.8
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcc
Q 020322 77 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 156 (327)
Q Consensus 77 ~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~ 156 (327)
.+.++|+|||++||++||+|++++++++.++.+.++||+||.||++.++..+.+.|... ..+.+++++|.| ..+
T Consensus 170 ~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~-----~~~~~~v~~G~~-~~~ 243 (405)
T PRK14576 170 LFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN-----FSRFNLISVGDN-FSP 243 (405)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc-----CCCCCEEEECCc-ccC
Confidence 46678999999999999999999999999999999999999999999999999887542 112357888988 568
Q ss_pred cCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHh
Q 020322 157 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 236 (327)
Q Consensus 157 h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~ 236 (327)
|+.|+++++++||+|++|+|+.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++++++++
T Consensus 244 h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~ 323 (405)
T PRK14576 244 KIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKT 323 (405)
T ss_pred CCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCce-ecceeeeecc--cccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEE
Q 020322 237 YNYGV-VRQFVGHGIG--RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHT 313 (327)
Q Consensus 237 ~G~~~-~~~~~GHgiG--~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~Edt 313 (327)
.||.. ..+++|||+| +.+||.|.+.. +++.+|++||||+|||++|.. |.+|+++|||
T Consensus 324 ~G~~~~~~~~~GHgiG~~l~~~e~P~i~~---~~~~~Le~GMv~~vEp~~y~~-----------------g~ggvriEDt 383 (405)
T PRK14576 324 SGLPHYNRGHLGHGDGVFLGLEEVPFVST---QATETFCPGMVLSLETPYYGI-----------------GVGSIMLEDM 383 (405)
T ss_pred cCCccccCCCCCCCCCCCCCcCcCCCcCC---CCCCccCCCCEEEECCceeec-----------------CCCEEEEeeE
Confidence 99974 5688999999 78899998754 567899999999999999873 5689999999
Q ss_pred EEEcCCCeEecCCC
Q 020322 314 ILITRDGAEILTQC 327 (327)
Q Consensus 314 vlVt~~G~e~LT~~ 327 (327)
|+||++|+|+||++
T Consensus 384 vlVTe~G~e~LT~~ 397 (405)
T PRK14576 384 ILITDSGFEFLSKL 397 (405)
T ss_pred EEECCCccccCCCC
Confidence 99999999999974
No 15
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-51 Score=392.24 Aligned_cols=225 Identities=28% Similarity=0.416 Sum_probs=212.7
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcc
Q 020322 77 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 156 (327)
Q Consensus 77 ~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~ 156 (327)
.+.++|++||+.||+.||+|+++++.++.++.+.++||+||.||+++++..+.+.|+.. .+|+++|++|.|++.+
T Consensus 147 ~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~-----~sf~~iv~~G~n~a~p 221 (384)
T COG0006 147 LVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEG-----PSFDTIVASGENAALP 221 (384)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----cCcCcEEeccccccCc
Confidence 45568999999999999999999999999999999999999999999999999999764 3689999999999999
Q ss_pred cCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHh
Q 020322 157 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 236 (327)
Q Consensus 157 h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~ 236 (327)
|+.|+++++++||+|++|+|+.|+||++|+||||++|+++++|+++|+.++++++++++++|||+++++|+.++++++.+
T Consensus 222 H~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~ 301 (384)
T COG0006 222 HYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEK 301 (384)
T ss_pred CCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCce-ecceeeeecc--cccccCCc-cccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeE
Q 020322 237 YNYGV-VRQFVGHGIG--RVFHADPV-VLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEH 312 (327)
Q Consensus 237 ~G~~~-~~~~~GHgiG--~~~he~p~-i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~Ed 312 (327)
.|+.. +.|.+|||+| +++||.|. +.. +...+|+|||||++||++|.+ |.+|+|+||
T Consensus 302 ~g~~~~~~h~~GHgvG~~l~vhE~p~~~~~---~~~~~L~~GMv~t~Epg~y~~-----------------g~~GirIEd 361 (384)
T COG0006 302 AGYGLYFLHGTGHGVGFVLDVHEHPQYLSP---GSDTTLEPGMVFSIEPGIYIP-----------------GGGGVRIED 361 (384)
T ss_pred cCCcccccCCccccCCCCcccCcCccccCC---CCCccccCCcEEEeccccccC-----------------CCceEEEEE
Confidence 88875 6778999999 99999994 543 678999999999999999874 789999999
Q ss_pred EEEEcCCCeEecCC
Q 020322 313 TILITRDGAEILTQ 326 (327)
Q Consensus 313 tvlVt~~G~e~LT~ 326 (327)
+|+||++|+|+||.
T Consensus 362 ~vlVte~G~e~LT~ 375 (384)
T COG0006 362 TVLVTEDGFEVLTR 375 (384)
T ss_pred EEEEcCCCceeccc
Confidence 99999999999994
No 16
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=1.2e-50 Score=390.35 Aligned_cols=233 Identities=21% Similarity=0.291 Sum_probs=207.3
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCccc
Q 020322 78 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 157 (327)
Q Consensus 78 ~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h 157 (327)
+.++|+|||++||++||+|++++++++.++++.++||+||.||++.+...+.++|+.. .+|++++++|.|+..+|
T Consensus 167 l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~-----~~~~~iv~~G~na~~~H 241 (438)
T PRK10879 167 VHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCILH 241 (438)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCC-----CCCCcEEEEcCcccccc
Confidence 3457999999999999999999999999999999999999999999999999999864 35889999999999999
Q ss_pred CCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHH-
Q 020322 158 GIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD- 235 (327)
Q Consensus 158 ~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~- 235 (327)
+.|++++|++||+|++|+|+.++||++|++|||++ |+++++|+++|++++++++++++++|||+++++|++++.+++.
T Consensus 242 ~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~ 321 (438)
T PRK10879 242 YTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVS 321 (438)
T ss_pred CCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 8999999999999999999999999999999999999886643
Q ss_pred -----------------hCCCce-ecceeeeecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCc
Q 020322 236 -----------------RYNYGV-VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNW 297 (327)
Q Consensus 236 -----------------~~G~~~-~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w 297 (327)
+.++.. +.|.+||++|+++||.|.+. ++++.+|+|||||||||++|.+.. |
T Consensus 322 ~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~---~~~~~~L~~GmV~tvEPgiY~~~~--------~ 390 (438)
T PRK10879 322 GLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG---QDRSRILEPGMVLTVEPGLYIAPD--------A 390 (438)
T ss_pred HHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC---CCCCCcCCCCCEEEECCEEEECCC--------c
Confidence 334432 57889999999999988764 256789999999999999998642 2
Q ss_pred eEEeeCCceeEEEeEEEEEcCCCeEecCC
Q 020322 298 TIVTEDGSLSAQFEHTILITRDGAEILTQ 326 (327)
Q Consensus 298 ~~~~~~g~~g~~~EdtvlVt~~G~e~LT~ 326 (327)
++..+..++|+|+||||+||++|+|+||.
T Consensus 391 ~~~~~~~~~GiRiED~VlVT~~G~e~LT~ 419 (438)
T PRK10879 391 DVPEQYRGIGIRIEDDIVITETGNENLTA 419 (438)
T ss_pred CcccccCccEEEeccEEEECCCcCeEcCc
Confidence 22233345799999999999999999996
No 17
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=1.2e-50 Score=376.22 Aligned_cols=227 Identities=20% Similarity=0.287 Sum_probs=204.8
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCC
Q 020322 75 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 154 (327)
Q Consensus 75 ~~~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~ 154 (327)
...+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.+...+.+.|... +..| .++++|.+ .
T Consensus 86 ~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~~-~ 159 (323)
T PRK15173 86 SSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGAD-F 159 (323)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECCC-C
Confidence 3466789999999999999999999999999999999999999999999998888876543 1123 45667776 4
Q ss_pred cccCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHH
Q 020322 155 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 234 (327)
Q Consensus 155 ~~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~ 234 (327)
.+|+.|+++++++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||+++++|++++++++
T Consensus 160 ~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~ 239 (323)
T PRK15173 160 SPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVI 239 (323)
T ss_pred ccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCce-ecceeeeeccc--ccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEe
Q 020322 235 DRYNYGV-VRQFVGHGIGR--VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFE 311 (327)
Q Consensus 235 ~~~G~~~-~~~~~GHgiG~--~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~E 311 (327)
++.|+.. +.+++|||+|+ .+||.|.+.. +++.+|++||||+|||++|.. +.+|+|+|
T Consensus 240 ~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~---~~~~~Le~GMV~tiEPgiy~~-----------------g~ggvriE 299 (323)
T PRK15173 240 KKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSIMIE 299 (323)
T ss_pred HHcCCccccCCCCCCcCCCCCCcCCCCCCCC---CCCCccCCCCEEEECCEEEcC-----------------CCcEEEEe
Confidence 9999973 56889999996 7899999865 567899999999999999863 45789999
Q ss_pred EEEEEcCCCeEecCCC
Q 020322 312 HTILITRDGAEILTQC 327 (327)
Q Consensus 312 dtvlVt~~G~e~LT~~ 327 (327)
|||+||++|+|+||++
T Consensus 300 DtvlVTe~G~e~LT~~ 315 (323)
T PRK15173 300 DMILINKEGIEFLSKL 315 (323)
T ss_pred eEEEEcCCcceeCCCC
Confidence 9999999999999974
No 18
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.3e-49 Score=352.43 Aligned_cols=224 Identities=18% Similarity=0.206 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCC-CCCCCCCCeeeecCCCCcccCCCCCCCCCCC
Q 020322 90 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDG 168 (327)
Q Consensus 90 I~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~-~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~G 168 (327)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+...+ ..+.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875321 1222334678999999999999999999999
Q ss_pred CEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCce-ecceee
Q 020322 169 DTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVG 247 (327)
Q Consensus 169 d~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~-~~~~~G 247 (327)
|+|++|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++||.. ..+.+|
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~G 160 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYG 160 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 466799
Q ss_pred eecccccccCCcc--ccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcCCCeEecC
Q 020322 248 HGIGRVFHADPVV--LHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILT 325 (327)
Q Consensus 248 HgiG~~~he~p~i--~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~G~e~LT 325 (327)
|++|+..||.|.- .....+++.+|+|||||+|||++|.+.. + +|.+|+|+||||+||++|+|+||
T Consensus 161 HgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~--------~-----~g~gG~ried~v~Vt~~G~e~Lt 227 (228)
T cd01090 161 HSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEG--------Q-----PGAGGYREHDILVINENGAENIT 227 (228)
T ss_pred cccccccccCCCccccccCCCCCCccCCCCEEEECCEEeeccc--------C-----CCCcEEEeeeEEEECCCccccCc
Confidence 9999999998731 1112356789999999999999997421 0 25679999999999999999998
Q ss_pred C
Q 020322 326 Q 326 (327)
Q Consensus 326 ~ 326 (327)
.
T Consensus 228 ~ 228 (228)
T cd01090 228 G 228 (228)
T ss_pred C
Confidence 4
No 19
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=2.9e-49 Score=354.24 Aligned_cols=223 Identities=25% Similarity=0.313 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 020322 90 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 169 (327)
Q Consensus 90 I~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 169 (327)
|++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+++ +|+.++++|.|+..+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999873 3788899999999999999999999999
Q ss_pred EEEEEEeeeeCcEEeeeeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCC---------
Q 020322 170 TINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY--------- 239 (327)
Q Consensus 170 ~v~vd~g~~~~Gy~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~--------- 239 (327)
+|++|+++.++||++|++|||++ |+++++++++|++++++++++++++|||++++||++++++++++.|+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999999 68999999999999999999999999999999999999999976532
Q ss_pred ----------ceecceeeeecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEE
Q 020322 240 ----------GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQ 309 (327)
Q Consensus 240 ----------~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~ 309 (327)
..+.|.+|||||+.+||.|.+.. .++++.+|++||||+|||++|.+..+... ++.| +.+|+|
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~-~~~~~~~l~~GMv~~iEp~iy~~~~~~~~-~~~~------~~~g~~ 226 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLR-YLRRARPLEPGMVITIEPGIYFIPDLLDV-PEYF------RGGGIR 226 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccccc-cCCCCCCCCCCCEEEECCEEEeCCccccc-cccc------ceeEEE
Confidence 23567899999999999997621 23677899999999999999987533321 2222 468999
Q ss_pred EeEEEEEcCCCeEecCC
Q 020322 310 FEHTILITRDGAEILTQ 326 (327)
Q Consensus 310 ~EdtvlVt~~G~e~LT~ 326 (327)
+||||+||++|+|+||+
T Consensus 227 ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 227 IEDDVLVTEDGPENLTR 243 (243)
T ss_pred eeeEEEEcCCcceeCcC
Confidence 99999999999999995
No 20
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=1.2e-47 Score=368.89 Aligned_cols=243 Identities=16% Similarity=0.207 Sum_probs=199.6
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcc
Q 020322 77 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 156 (327)
Q Consensus 77 ~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~ 156 (327)
.+.++|+|||++||++||+|+++++++++++++.++||+||.||++.+.... ..+... .+|++++++|.|+.++
T Consensus 154 ~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~~ 227 (443)
T PRK13607 154 YLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAVL 227 (443)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceEe
Confidence 4456899999999999999999999999999999999999999998665432 222221 4589999999999999
Q ss_pred cCCCCCC-CCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHH-
Q 020322 157 HGIPDSR-ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA- 234 (327)
Q Consensus 157 h~~p~~~-~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~- 234 (327)
|+.|+++ .+++||+|++|+|+.++||++|+||||+ |+++++++++|++++++++++++++|||++++||+.++.+++
T Consensus 228 H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~ 306 (443)
T PRK13607 228 HYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIA 306 (443)
T ss_pred cCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Confidence 9999875 6899999999999999999999999999 889999999999999999999999999999999999998766
Q ss_pred ---HhCCCc----------------eecceeeeecccccccCCccccc-------------cCCCCccccCCcEEEEcce
Q 020322 235 ---DRYNYG----------------VVRQFVGHGIGRVFHADPVVLHY-------------RNNDHGRMVLNQTFTIEPM 282 (327)
Q Consensus 235 ---~~~G~~----------------~~~~~~GHgiG~~~he~p~i~~~-------------~~~~~~~l~~GmvftiEP~ 282 (327)
.+.|+. .+.|.+||+||+++||.+.+... .-....+|+|||||||||+
T Consensus 307 ~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPG 386 (443)
T PRK13607 307 KLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPG 386 (443)
T ss_pred HHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEECCe
Confidence 334433 25788999999999997533110 0024579999999999999
Q ss_pred eecCCCCCcccCC-------CceEEee-CCceeEEEeEEEEEcCCCeEecCC
Q 020322 283 LTIGSINPVMWDD-------NWTIVTE-DGSLSAQFEHTILITRDGAEILTQ 326 (327)
Q Consensus 283 i~~~~~~~~~~~d-------~w~~~~~-~g~~g~~~EdtvlVt~~G~e~LT~ 326 (327)
+|++...+..|.+ +|..+.+ .+.+|+|+||+|+||++|+|+||+
T Consensus 387 iY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 387 LYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred eeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECCh
Confidence 9997532222211 3433322 356799999999999999999995
No 21
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=1.5e-45 Score=322.31 Aligned_cols=207 Identities=29% Similarity=0.496 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 020322 90 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 169 (327)
Q Consensus 90 I~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 169 (327)
|++||+|+++++++++++.+.++||+||.||++.+++.+.++|+++ .+|++++++|.|+..+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~-----~~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEG-----PSFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC-----CCCCcEEEECccccccCCCCCCcCcCCCC
Confidence 6899999999999999999999999999999999999999999875 45899999999999999999999999999
Q ss_pred EEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCce-ecceeee
Q 020322 170 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGH 248 (327)
Q Consensus 170 ~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~-~~~~~GH 248 (327)
+|++|+|+.++||++|++||+++|+++++++++++++.++++.+++++|||++++||+++++++++++|+.. +.+.+||
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh 155 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH 155 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 4677999
Q ss_pred ecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcCCCe
Q 020322 249 GIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 321 (327)
Q Consensus 249 giG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~G~ 321 (327)
+||+..||.|.+.. +++.+|++||||+|||+++.+ +.+|+++||||+||++|+
T Consensus 156 ~iG~~~~e~p~i~~---~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 156 GVGLEVHEAPYISP---GSDDVLEEGMVFTIEPGIYIP-----------------GKGGVRIEDDVLVTEDGC 208 (208)
T ss_pred ccCcccCcCCCcCC---CCCCCcCCCCEEEECCeEEec-----------------CCCEEEeeeEEEECCCCC
Confidence 99999999998754 678899999999999999863 557999999999999995
No 22
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=3.7e-44 Score=338.37 Aligned_cols=244 Identities=20% Similarity=0.346 Sum_probs=212.4
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCC----CCCCCCCeeeecCCCCccc
Q 020322 82 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPL----GYGGFPKSVCTSVNECICH 157 (327)
Q Consensus 82 r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~----~~~~~~~~v~~g~n~~~~h 157 (327)
-.+|+++||++||+|++|++++++.+.+.++||+|+.||++.+++.+.+.++. ... .+.+++...|++.|+.++|
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 46899999999999999999999999999999999999999999999886642 111 1223333355679999999
Q ss_pred CCC--C--CCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhH
Q 020322 158 GIP--D--SRALEDGDTINIDVTVYLNGYHGDTSATFFCGD-----VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGK 228 (327)
Q Consensus 158 ~~p--~--~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~-----~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~ 228 (327)
+.| + +++|++||+|+||+|+.++||++|++|||++|+ ++++++++++++++|++++++++|||++++||++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ 169 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTE 169 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 999 2 488999999999999999999999999999995 5778999999999999999999999999999999
Q ss_pred HHHHHHHhCCCceecceeeeeccccccc-CCcc-ccccC-----CCCccccCCcEEEEcceeecCCCCCcccCCCce---
Q 020322 229 TIQDHADRYNYGVVRQFVGHGIGRVFHA-DPVV-LHYRN-----NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWT--- 298 (327)
Q Consensus 229 ~~~~~~~~~G~~~~~~~~GHgiG~~~he-~p~i-~~~~~-----~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~--- 298 (327)
+++++++++||.++++++||+||..+|+ .|.| .++.. .....|++||||+|||+++.|++++..++|.|+
T Consensus 170 ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~ 249 (389)
T TIGR00495 170 AINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYK 249 (389)
T ss_pred HHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEE
Confidence 9999999999999999999999999998 8875 44421 246799999999999999999988776655444
Q ss_pred -----------------------------------------------------------EEeeCCceeEEEeEEEEEcCC
Q 020322 299 -----------------------------------------------------------IVTEDGSLSAQFEHTILITRD 319 (327)
Q Consensus 299 -----------------------------------------------------------~~~~~g~~g~~~EdtvlVt~~ 319 (327)
+..++|.+.+|||+||+|+++
T Consensus 250 ~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~Tv~v~~~ 329 (389)
T TIGR00495 250 RDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFTVLLMPN 329 (389)
T ss_pred ECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEEEEECCC
Confidence 244679999999999999999
Q ss_pred CeEecCC
Q 020322 320 GAEILTQ 326 (327)
Q Consensus 320 G~e~LT~ 326 (327)
|+++||.
T Consensus 330 g~~~~t~ 336 (389)
T TIGR00495 330 GPMRITS 336 (389)
T ss_pred CcEEeCC
Confidence 9999996
No 23
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=3.3e-44 Score=316.60 Aligned_cols=209 Identities=15% Similarity=0.138 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCC--CCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCC---CCCC
Q 020322 91 ECMRVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 165 (327)
Q Consensus 91 ~~~r~A~~ia~~~~~~~~~~i~~G--~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~---~~~l 165 (327)
+.||.+..+ .++++.+.+.++|| +||.||++.+++.+...|.++. .+|+++|++|.|+.++|+.|+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCccc
Confidence 345666655 58999999999999 9999999999988877765432 358999999999999999998 9999
Q ss_pred CCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHh-cCCCchHHHhHHHHHHHHhCCCceecc
Q 020322 166 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVC-APGMEYKKIGKTIQDHADRYNYGVVRQ 244 (327)
Q Consensus 166 ~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~-kpG~~~~ei~~~~~~~~~~~G~~~~~~ 244 (327)
++||+|++|+++.++||++|++|||++|+++++++++|+.+++++.++++.+ +||+++++|++++++.+.+.|+. +.|
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999988 59999999999999999999986 678
Q ss_pred eeeeecc--cccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcCCCeE
Q 020322 245 FVGHGIG--RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAE 322 (327)
Q Consensus 245 ~~GHgiG--~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~G~e 322 (327)
++||||| +.+||.|.+. +.++++.+|++||||+|||++|.+ |.+|+|+||||+||++|+.
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~-----------------g~~gvried~v~Vt~~G~~ 220 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKE-----------------GKYGIRIENLVLVVEAETT 220 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeC-----------------CCeEEEeeEEEEEeeCCcC
Confidence 8999999 5889999874 223567899999999999999974 5689999999999999975
Q ss_pred e
Q 020322 323 I 323 (327)
Q Consensus 323 ~ 323 (327)
-
T Consensus 221 ~ 221 (224)
T cd01085 221 E 221 (224)
T ss_pred C
Confidence 3
No 24
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=8e-44 Score=317.58 Aligned_cols=226 Identities=15% Similarity=0.222 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----hcCCC--CCHHHHHHHHHHHHHHCCCC-----cCCCCCCCCCCeeeecCCC-Ccc
Q 020322 90 IECMRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAY-----PSPLGYGGFPKSVCTSVNE-CIC 156 (327)
Q Consensus 90 I~~~r~A~~ia~~~~~~~~~-----~i~~G--~te~ei~~~~~~~~~~~g~~-----~~~~~~~~~~~~v~~g~n~-~~~ 156 (327)
++++|+|++++..+|..... .|.+| +|+.+|+..++..+.+.+.. |..+. .+|++++++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976555 89999 99999999999999988754 22222 4699999999999 899
Q ss_pred cCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHh
Q 020322 157 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 236 (327)
Q Consensus 157 h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~ 236 (327)
|+.++++.++.|++|++|+|++|+|||+|++|||++| ++++++++|++++++++++++++|||++++||++++++++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred CCCce---ecceeeeecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEE
Q 020322 237 YNYGV---VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHT 313 (327)
Q Consensus 237 ~G~~~---~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~Edt 313 (327)
.|... +.|.+|||||+++||.|.+.. ++++.+|++||||++||+++... +.+....+++.+|+++|||
T Consensus 159 ~~~~~~~~~~~~~GHgiGle~hE~~~~l~--~~~~~~L~~GMvf~vepGi~~~~-------~~~~~~~~~~~~gv~ieDt 229 (243)
T cd01091 159 KKPELEPNFTKNLGFGIGLEFRESSLIIN--AKNDRKLKKGMVFNLSIGFSNLQ-------NPEPKDKESKTYALLLSDT 229 (243)
T ss_pred hChhHHHhCcCCcccccCcccccCccccC--CCCCCCcCCCCEEEEeCCccccc-------CccccCccCCeeEEEEEEE
Confidence 87543 456799999999999886433 25678999999999999998321 1110111235789999999
Q ss_pred EEEcCCCe-EecCC
Q 020322 314 ILITRDGA-EILTQ 326 (327)
Q Consensus 314 vlVt~~G~-e~LT~ 326 (327)
|+||++|+ |+||.
T Consensus 230 V~Vt~~G~~~~LT~ 243 (243)
T cd01091 230 ILVTEDEPAIVLTN 243 (243)
T ss_pred EEEcCCCCceecCC
Confidence 99999999 99985
No 25
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=3.5e-43 Score=307.34 Aligned_cols=204 Identities=30% Similarity=0.492 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH-HHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 020322 91 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 169 (327)
Q Consensus 91 ~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~-~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 169 (327)
|+||+|+++++++++++.+.++||+||.||++.+.+. +.+.|... .+|++++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 56667543 35788899999999999999999999999
Q ss_pred EEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCC-ceecceeee
Q 020322 170 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 248 (327)
Q Consensus 170 ~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~-~~~~~~~GH 248 (327)
+|++|+++.++||++|++||+++| ++++++++++.++++++.+++++|||++++||++++.+.++++|+ ..+.+.+||
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 154 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGH 154 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEE
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccc
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999 557889999
Q ss_pred ecccccccC-CccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcC
Q 020322 249 GIGRVFHAD-PVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 318 (327)
Q Consensus 249 giG~~~he~-p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~ 318 (327)
+||+.+|+. |++.+ .+++.+|++||||+|||+++.. ++.+|+++||||+|||
T Consensus 155 ~iG~~~~~~~P~i~~--~~~~~~l~~gmv~~iep~~~~~----------------~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 155 GIGLEFHEPGPNIAR--PGDDTVLEPGMVFAIEPGLYFI----------------PGWGGVRFEDTVLVTE 207 (207)
T ss_dssp EESSSSSEEEEEESS--TTTSSB--TTBEEEEEEEEEEE----------------TTSEEEEEBEEEEEES
T ss_pred cccccccccceeeec--ccccceecCCCceeEeeeEEcc----------------CCCcEEEEEEEEEECc
Confidence 999999997 99763 2678899999999999999742 2456999999999996
No 26
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.6e-42 Score=317.44 Aligned_cols=227 Identities=31% Similarity=0.556 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCC---CCCC
Q 020322 89 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 165 (327)
Q Consensus 89 EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~---~~~l 165 (327)
+|++||+|++|++++++.+.+.++||+||.||++.+++.+.+.|+.++ ||+.+ +.|+..+|+.|. ++.|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998753 77665 467778999986 6889
Q ss_pred CCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceecce
Q 020322 166 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF 245 (327)
Q Consensus 166 ~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~~ 245 (327)
++||+|++|+|+.++||++|++||+++| ++++++++++.+|++++++++|||++++||+++++++++++||..+.++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~ 149 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL 149 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999998 4788999999999999999999999999999999999999999988899
Q ss_pred eeeeccc-ccccCCccccccCCCCccccCCcEEEEcceeecCCCCCccc-------------------------------
Q 020322 246 VGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMW------------------------------- 293 (327)
Q Consensus 246 ~GHgiG~-~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~------------------------------- 293 (327)
+|||||+ .+|+.|.+++..++++.+|++||||+|||+++.+.+.+...
T Consensus 150 ~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~~~~i~~~~~ 229 (291)
T PRK08671 150 TGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYSLLRNRPVRLPAARKLLEEIEEEYN 229 (291)
T ss_pred cccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEECCCCeEecCCceEEEeecCCCCCCCHHHHHHHHHHHHHCC
Confidence 9999997 79999998776667789999999999999999887765310
Q ss_pred ---------CC-------------------Cce-EEeeCCceeEEEeEEEEEcCCCeEecCC
Q 020322 294 ---------DD-------------------NWT-IVTEDGSLSAQFEHTILITRDGAEILTQ 326 (327)
Q Consensus 294 ---------~d-------------------~w~-~~~~~g~~g~~~EdtvlVt~~G~e~LT~ 326 (327)
+| .|. ++.++|++-+||||||+||++|++++|+
T Consensus 230 ~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~yp~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 230 TLPFAERWLEGLFGEDKLELRRLLKAGALYGYPVLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred CCCcchHHhhccchhhHHHHHHHHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 01 121 2456899999999999999999999985
No 27
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=1.5e-42 Score=329.44 Aligned_cols=237 Identities=25% Similarity=0.358 Sum_probs=205.6
Q ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHC----CCCcCCCCCCCCCCeeeecCCCCcc
Q 020322 81 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECIC 156 (327)
Q Consensus 81 ~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~----g~~~~~~~~~~~~~~v~~g~n~~~~ 156 (327)
.+..+|++||+.||+|++|++++++.+.+.++||+|+.||+..++..+.+. |+.. ..+||+. +|.|++.+
T Consensus 149 ~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~----g~aFPt~--vS~N~~aa 222 (470)
T PTZ00053 149 ELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC----GWAFPTG--CSLNHCAA 222 (470)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc----cCCCCce--eecCcccc
Confidence 345689999999999999999999999999999999999999888876554 5432 2568874 57999999
Q ss_pred cCCCC---CCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHH
Q 020322 157 HGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH 233 (327)
Q Consensus 157 h~~p~---~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~ 233 (327)
|+.|+ +++|++||+|+||+|+.++||++|++|||++| ++++++++++++|++++|+++|||++++||+++++++
T Consensus 223 H~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqev 299 (470)
T PTZ00053 223 HYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEV 299 (470)
T ss_pred CCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99996 68899999999999999999999999999997 6889999999999999999999999999999999999
Q ss_pred HHhCCCc---------eecceeeeeccc-ccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcc--------c--
Q 020322 234 ADRYNYG---------VVRQFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVM--------W-- 293 (327)
Q Consensus 234 ~~~~G~~---------~~~~~~GHgiG~-~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~--------~-- 293 (327)
++++||. ++.+++|||||+ .+|+.|.++.+.+++..+|++||||+|||+++.|.+.+.. .
T Consensus 300 ies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~~ 379 (470)
T PTZ00053 300 IESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDP 379 (470)
T ss_pred HHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEEcceeeCCCCeEecCCCceeeeEcC
Confidence 9999974 368999999998 8999877766656778899999999999999988876531 0
Q ss_pred --------------------------------CC---------------------Cce-EEeeCCceeEEEeEEEEEcCC
Q 020322 294 --------------------------------DD---------------------NWT-IVTEDGSLSAQFEHTILITRD 319 (327)
Q Consensus 294 --------------------------------~d---------------------~w~-~~~~~g~~g~~~EdtvlVt~~ 319 (327)
-| .|. ++.++|.+.+||||||+++++
T Consensus 380 ~~~~~~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~gl~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p~ 459 (470)
T PTZ00053 380 GAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWLDRLGQDRHLLALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPT 459 (470)
T ss_pred cCCcCCCCCHHHHHHHHHHHHHCCCCCcchhhhhccchhHHHHHHHHHHHCCCcccCCccCccCCCEEeEEEEEEEECCC
Confidence 00 111 244579999999999999999
Q ss_pred CeEecCC
Q 020322 320 GAEILTQ 326 (327)
Q Consensus 320 G~e~LT~ 326 (327)
|.|+||+
T Consensus 460 ~~~vis~ 466 (470)
T PTZ00053 460 CKEVLSR 466 (470)
T ss_pred CCEecCC
Confidence 9999996
No 28
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=1.2e-41 Score=311.80 Aligned_cols=229 Identities=29% Similarity=0.464 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCC---CC
Q 020322 87 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SR 163 (327)
Q Consensus 87 ~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~---~~ 163 (327)
-+||++||+|++|++++++.+.+.++||+|+.||++.+++.+.+.|+.+ +||+++ +.|+..+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~------aFp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP------AFPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcce--ecCCEeeCCCCCCCcCc
Confidence 4799999999999999999999999999999999999999999999885 488765 478899999985 67
Q ss_pred CCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceec
Q 020322 164 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR 243 (327)
Q Consensus 164 ~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~ 243 (327)
+|++||+|++|+|+.++||++|++|||++|+ .++++++++.+|++++++++|||++++||+++++++++++||..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999986 4789999999999999999999999999999999999999999888
Q ss_pred ceeeeeccc-ccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccC----------------------------
Q 020322 244 QFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWD---------------------------- 294 (327)
Q Consensus 244 ~~~GHgiG~-~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~---------------------------- 294 (327)
+++|||+|. ..|+.+.++...++++.+|++||||+|||++..+.+.+...+
T Consensus 151 ~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~l~~i~~~ 230 (295)
T TIGR00501 151 NLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIYAFLAERPVRLDSARNLLKTIDEN 230 (295)
T ss_pred CCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEceeEECCcCeEecCCCeEEEeECCCCCCCCHHHHHHHHHHHHH
Confidence 999999995 788876665544566789999999999999987766542100
Q ss_pred ------------C--------------------Cce-EEeeCCceeEEEeEEEEEcCCCeEecCC
Q 020322 295 ------------D--------------------NWT-IVTEDGSLSAQFEHTILITRDGAEILTQ 326 (327)
Q Consensus 295 ------------d--------------------~w~-~~~~~g~~g~~~EdtvlVt~~G~e~LT~ 326 (327)
| .|. +..++|.+.+|||+||+|+++|++++|+
T Consensus 231 ~~~~pF~~r~l~~~~~~~~~~~l~~~~~~~~~~~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 231 YGTLPFARRWLDKLGDEKYLFALNNLIRHGLIYDYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred CCCCCcchhHhcccchhHHHHHHHHHHHCCCccCCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 0 121 2456899999999999999999999985
No 29
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=1.2e-41 Score=301.96 Aligned_cols=214 Identities=24% Similarity=0.402 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCC--CCcC-CC--CCCCCCCeeeecCCCCcccCCC----
Q 020322 90 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPS-PL--GYGGFPKSVCTSVNECICHGIP---- 160 (327)
Q Consensus 90 I~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g--~~~~-~~--~~~~~~~~v~~g~n~~~~h~~p---- 160 (327)
+++||+|++|++++++++.+.++||+||.||+..+++.+.+.. .++. .. ...+|++++ +.|+..+|+.|
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v--~~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCI--SVNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEe--ccCceeecCCCCCCC
Confidence 4689999999999999999999999999999988888777732 1221 01 123455554 46899999986
Q ss_pred CCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCH-----HHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHH
Q 020322 161 DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-----EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD 235 (327)
Q Consensus 161 ~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~-----~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~ 235 (327)
++++|++||+|++|+|+.++||++|++|||++|++++ ++++++++++++++++++++|||++++||+++++++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~ 158 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIV 158 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999999875 89999999999999999999999999999999999999
Q ss_pred hCCCceecceeeeecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEE
Q 020322 236 RYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTIL 315 (327)
Q Consensus 236 ~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~Edtvl 315 (327)
++||.++..+.+|++|..++-.|.-. .-..+|++||||++||.++. +|.+++++||||+
T Consensus 159 ~~G~~~~~~~~~h~~g~~~~~~~~~~----~~~~~l~~gmvf~~ep~~~~-----------------~g~~~~~~~~Tv~ 217 (228)
T cd01089 159 DYGCTPVEGVLSHQLKRVVSSGEGKA----KLVECVKHGLLFPYPVLYEK-----------------EGEVVAQFKLTVL 217 (228)
T ss_pred HcCCEEecCccccCcCceEecCCCCc----cchhhccCCcccccceeEcc-----------------CCCeEEEEEEEEE
Confidence 99998888888888887443332110 12568999999999999987 3778999999999
Q ss_pred EcCCCeEecCC
Q 020322 316 ITRDGAEILTQ 326 (327)
Q Consensus 316 Vt~~G~e~LT~ 326 (327)
||++|+|.||.
T Consensus 218 vt~~G~e~lt~ 228 (228)
T cd01089 218 LTPNGVTVLTG 228 (228)
T ss_pred EcCCCCeeCCC
Confidence 99999999984
No 30
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1.2e-41 Score=295.98 Aligned_cols=206 Identities=28% Similarity=0.499 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 020322 90 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 169 (327)
Q Consensus 90 I~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd 169 (327)
|+.||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+ .+++++++|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999943 3678889999889999999999999999
Q ss_pred EEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCC-ceecceeee
Q 020322 170 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 248 (327)
Q Consensus 170 ~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~-~~~~~~~GH 248 (327)
+|++|+++.++||++|++||+++|+++++++++++.+.++++.+++.+|||++++||++++++++++.|+ ....+++||
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh 154 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH 154 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 456889999
Q ss_pred ecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcCCCe
Q 020322 249 GIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 321 (327)
Q Consensus 249 giG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~G~ 321 (327)
++|+..||.|.+.. +.+.+|++||+|+|||+++.+ +.+|+++||||+||++|+
T Consensus 155 ~iG~~~~e~~~~~~---~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 155 GIGLEIHEPPVLKA---GDDTVLEPGMVFAVEPGLYLP-----------------GGGGVRIEDTVLVTEDGP 207 (207)
T ss_pred ccCcccCCCCCcCC---CCCCCcCCCCEEEECCEEEEC-----------------CCcEEEeeeEEEEeCCCC
Confidence 99999999998543 567899999999999999874 357999999999999985
No 31
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.4e-41 Score=309.65 Aligned_cols=226 Identities=31% Similarity=0.547 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCC---CCCC
Q 020322 90 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS---RALE 166 (327)
Q Consensus 90 I~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~---~~l~ 166 (327)
+++||+|+++++++++++.+.++||+||.||++.+++.+.+.|..+ +||+. +|.|+..+|+.|+. ++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~------afp~~--is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP------AFPVN--LSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC------CCCce--eccCCEeeCCCCCCCCCcccC
Confidence 3689999999999999999999999999999999999999999765 37754 67899999999964 8899
Q ss_pred CCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceeccee
Q 020322 167 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFV 246 (327)
Q Consensus 167 ~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~~~ 246 (327)
+||+|++|+|+.++||++|++||+.+|+ +++++++++++|++++++++|||++++||+++++++++++|+..+.+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~ 149 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLT 149 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999999999999999999999999986 7889999999999999999999999999999999999999999888999
Q ss_pred eeeccc-ccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcc--------c------------------------
Q 020322 247 GHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVM--------W------------------------ 293 (327)
Q Consensus 247 GHgiG~-~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~--------~------------------------ 293 (327)
||+||. ..|+.|.++.+..+++.+|++||||+|||+++.+.+.+.. .
T Consensus 150 GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~~~~~~~~~~~~~r~~~~~i~~~~~~ 229 (291)
T cd01088 150 GHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDKPLRLPRARKLLDVIYENFGT 229 (291)
T ss_pred ccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeEECCCCeeecCCceEEEEEcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999995 7899888766655667899999999999999988776521 0
Q ss_pred --------CC--------------------Cce-EEeeCCceeEEEeEEEEEcCCCeEecCC
Q 020322 294 --------DD--------------------NWT-IVTEDGSLSAQFEHTILITRDGAEILTQ 326 (327)
Q Consensus 294 --------~d--------------------~w~-~~~~~g~~g~~~EdtvlVt~~G~e~LT~ 326 (327)
+| .|. +..++|.+.+||||||+||++|++++|+
T Consensus 230 ~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 230 LPFARRWLDRLGETKLLMALKNLCKAGIVYPYPVLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred CCcChHHhhccchhhHHHHHHHHHHCCCcccCCccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 01 122 2456899999999999999999999995
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=313.78 Aligned_cols=232 Identities=21% Similarity=0.244 Sum_probs=209.4
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcc
Q 020322 77 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 156 (327)
Q Consensus 77 ~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~ 156 (327)
.+.++|.||||+|+++||+||.|+.+++-..+..-|+...|..+.+.++..++..|++- ..||+.|+.|.|+...
T Consensus 221 li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~na~tI 295 (488)
T KOG2414|consen 221 LIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKNANTI 295 (488)
T ss_pred HHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcccceE
Confidence 44568999999999999999999999999999999999999999999999999999976 5699999999999999
Q ss_pred cCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHHhcC--CCchHHHhHHHHHH
Q 020322 157 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAP--GMEYKKIGKTIQDH 233 (327)
Q Consensus 157 h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~i~~~kp--G~~~~ei~~~~~~~ 233 (327)
|+.-++..+.++|+|++|.|+.++||++|+||||.+ |..++.|++||++++..++..|+.++| |.++.+|+....+.
T Consensus 296 HY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~L 375 (488)
T KOG2414|consen 296 HYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNEL 375 (488)
T ss_pred EEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999999999 99999999877665
Q ss_pred H----HhCCC------------ceecceeeeecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCc
Q 020322 234 A----DRYNY------------GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNW 297 (327)
Q Consensus 234 ~----~~~G~------------~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w 297 (327)
+ ++.|. ..++|..||-+|+++|+-|.+.. +..|+|||||||||++|.|.. |
T Consensus 376 l~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r-----~~pL~pg~ViTIEPGvYIP~d--------~ 442 (488)
T KOG2414|consen 376 LGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSR-----DIPLQPGMVITIEPGVYIPED--------D 442 (488)
T ss_pred HHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCC-----CccCCCCceEEecCceecCcc--------C
Confidence 4 44453 23678999999999999999864 579999999999999999753 2
Q ss_pred eEEeeCCceeEEEeEEEEEcCCCeEecCC
Q 020322 298 TIVTEDGSLSAQFEHTILITRDGAEILTQ 326 (327)
Q Consensus 298 ~~~~~~g~~g~~~EdtvlVt~~G~e~LT~ 326 (327)
+....-.+.|+|+||.|+|+++|+|+||.
T Consensus 443 d~P~~FrGIGiRIEDDV~i~edg~evLT~ 471 (488)
T KOG2414|consen 443 DPPEEFRGIGIRIEDDVAIGEDGPEVLTA 471 (488)
T ss_pred CCchHhcCceEEeecceEeccCCceeehh
Confidence 33333467899999999999999999994
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=3.2e-39 Score=289.67 Aligned_cols=248 Identities=16% Similarity=0.197 Sum_probs=207.0
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCC
Q 020322 75 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 154 (327)
Q Consensus 75 ~~~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~ 154 (327)
.+.+.+.|.|||+.||+.||.|++|+++++.++++.++||+.|.++...+......+|...+ .+|..|.++|.|..
T Consensus 176 yp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~ 251 (492)
T KOG2737|consen 176 YPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSA 251 (492)
T ss_pred hHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcc
Confidence 35778899999999999999999999999999999999999999999999999999988554 57899999999999
Q ss_pred cccC----CCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHH
Q 020322 155 ICHG----IPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKT 229 (327)
Q Consensus 155 ~~h~----~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~ 229 (327)
+.|+ .|+++.+++||.+++|+|+.|.+|.+|+|++|.. |+.+++|+.+|+++++++.++++++|||+.+.|++..
T Consensus 252 vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~L 331 (492)
T KOG2737|consen 252 VLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKL 331 (492)
T ss_pred eeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHH
Confidence 9998 7999999999999999999999999999999999 9999999999999999999999999999999999977
Q ss_pred HHHHH----HhCCC---------------ceecceeeeecccccccCCc-cccc-cC--------CCCccccCCcEEEEc
Q 020322 230 IQDHA----DRYNY---------------GVVRQFVGHGIGRVFHADPV-VLHY-RN--------NDHGRMVLNQTFTIE 280 (327)
Q Consensus 230 ~~~~~----~~~G~---------------~~~~~~~GHgiG~~~he~p~-i~~~-~~--------~~~~~l~~GmvftiE 280 (327)
..+++ ++.|. ...+|-+||-+|+++|+-.- ...+ ++ ...+.|++|||+|+|
T Consensus 332 a~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvE 411 (492)
T KOG2737|consen 332 AEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVE 411 (492)
T ss_pred HHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEec
Confidence 76654 33332 12578899999999998221 1111 11 355799999999999
Q ss_pred ceeecCCCCCcc-cCCC-------ceEEee-CCceeEEEeEEEEEcCCCeEecCC
Q 020322 281 PMLTIGSINPVM-WDDN-------WTIVTE-DGSLSAQFEHTILITRDGAEILTQ 326 (327)
Q Consensus 281 P~i~~~~~~~~~-~~d~-------w~~~~~-~g~~g~~~EdtvlVt~~G~e~LT~ 326 (327)
|+.|+-...+.. ..|. -.+..+ .+.+|+|+||.|+||++|+|.||.
T Consensus 412 PGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~ 466 (492)
T KOG2737|consen 412 PGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTC 466 (492)
T ss_pred CChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccC
Confidence 999975432210 1110 001111 367899999999999999999984
No 34
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.94 E-value=1.8e-26 Score=222.31 Aligned_cols=241 Identities=18% Similarity=0.272 Sum_probs=195.6
Q ss_pred CCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-----HhhhcCCC--CCHHHHHHHHHHHHHHC----CCCcCC
Q 020322 69 YVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEY-----AGTLVKPG--ITTDEIDKAVHQMIIDN----GAYPSP 137 (327)
Q Consensus 69 ~~~~~~~~~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~-----~~~~i~~G--~te~ei~~~~~~~~~~~----g~~~~~ 137 (327)
|...+....+..+..+|++.||+.+|+|++++...|.. ...+|..+ +|...+...+...+.+. |..|..
T Consensus 122 fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~ 201 (960)
T KOG1189|consen 122 FNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDL 201 (960)
T ss_pred CceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccc
Confidence 33334444567788999999999999999999999973 33455555 57777888888777655 444433
Q ss_pred CCCCCCCCeeeecCCCCc-ccCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHH
Q 020322 138 LGYGGFPKSVCTSVNECI-CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISV 216 (327)
Q Consensus 138 ~~~~~~~~~v~~g~n~~~-~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~ 216 (327)
+. +.||+++.+|.+..+ +....+++.| + +|+..+|++|++||++++|||++ .|+.++++.|+.++.+|++++..
T Consensus 202 ~d-~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~il~~ 276 (960)
T KOG1189|consen 202 LD-MCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEEILKL 276 (960)
T ss_pred cc-cccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHHHHHh
Confidence 44 569999999988654 3455667777 3 99999999999999999999999 78999999999999999999999
Q ss_pred hcCCCchHHHhHHHHHHHHhCCCceecce---eeeecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCccc
Q 020322 217 CAPGMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMW 293 (327)
Q Consensus 217 ~kpG~~~~ei~~~~~~~~~~~G~~~~~~~---~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~ 293 (327)
||||+..++||.++.+++++.+......+ +|.|||+++.|..++.+. .++.+|++||||.|.-++..-..
T Consensus 277 lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~ina--Knd~~lk~gmvFni~lGf~nl~n----- 349 (960)
T KOG1189|consen 277 LRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINA--KNDRVLKKGMVFNISLGFSNLTN----- 349 (960)
T ss_pred hcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeecccccccc--cchhhhccCcEEEEeeccccccC-----
Confidence 99999999999999999999998765444 899999999999987765 55689999999999887754211
Q ss_pred CCCceEEeeCCceeEEEeEEEEEcCCCe-EecCCC
Q 020322 294 DDNWTIVTEDGSLSAQFEHTILITRDGA-EILTQC 327 (327)
Q Consensus 294 ~d~w~~~~~~g~~g~~~EdtvlVt~~G~-e~LT~~ 327 (327)
....+.+++.+.|||||+++++ ++||.+
T Consensus 350 ------~~~~~~yaL~l~DTvlv~e~~p~~vLT~~ 378 (960)
T KOG1189|consen 350 ------PESKNSYALLLSDTVLVGEDPPAEVLTDS 378 (960)
T ss_pred ------cccccchhhhccceeeecCCCcchhhccc
Confidence 0112458899999999999997 999964
No 35
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.7e-24 Score=206.06 Aligned_cols=227 Identities=16% Similarity=0.203 Sum_probs=191.1
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhh----hcCCC--CCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeee
Q 020322 75 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGT----LVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC 148 (327)
Q Consensus 75 ~~~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~----~i~~G--~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 148 (327)
.+.+..++++|+++|++.||.|----..|+.+... .+..| +||.+++..+++.=.++..+-. .+|++|.+
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~ 373 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISS 373 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeec
Confidence 34556678899999999999876555555555444 34456 8999999999988877765533 56999986
Q ss_pred e-cCCCCcccCCCC---CCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcC-CCch
Q 020322 149 T-SVNECICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAP-GMEY 223 (327)
Q Consensus 149 ~-g~n~~~~h~~p~---~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kp-G~~~ 223 (327)
+ |+|.++.|+.|. ++.+.+..+.++|-|++|.-=.+|+|||+++|+|++++++.|..+++.+-++.++.-| |...
T Consensus 374 s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g 453 (606)
T KOG2413|consen 374 SVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKG 453 (606)
T ss_pred cCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCc
Confidence 6 999999999985 4589999999999999998889999999999999999999999999999999998866 6788
Q ss_pred HHHhHHHHHHHHhCCCceecceeeeeccc--ccccCCccccccC-CCCccccCCcEEEEcceeecCCCCCcccCCCceEE
Q 020322 224 KKIGKTIQDHADRYNYGVVRQFVGHGIGR--VFHADPVVLHYRN-NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIV 300 (327)
Q Consensus 224 ~ei~~~~~~~~~~~G~~~~~~~~GHgiG~--~~he~p~i~~~~~-~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~ 300 (327)
+.++..++..+.+.|.. +.|-+|||+|. ++||+|....+++ .++..|++||++++||+.|.
T Consensus 454 ~~lD~laR~~LW~~gLD-y~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~--------------- 517 (606)
T KOG2413|consen 454 SVLDALARSALWKAGLD-YGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYK--------------- 517 (606)
T ss_pred chhHHHHHHHHHhhccc-cCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccc---------------
Confidence 88899999999999986 68899999998 6899997655542 56678999999999999997
Q ss_pred eeCCceeEEEeEEEEEcCCCeEe
Q 020322 301 TEDGSLSAQFEHTILITRDGAEI 323 (327)
Q Consensus 301 ~~~g~~g~~~EdtvlVt~~G~e~ 323 (327)
||.+|+|+|+.++|.+.+...
T Consensus 518 --dg~fGIRienv~~vvd~~~~~ 538 (606)
T KOG2413|consen 518 --DGEFGIRIENVVEVVDAGTKH 538 (606)
T ss_pred --cCcceEEEeeEEEEEeccccc
Confidence 588999999999998776443
No 36
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.87 E-value=7.5e-21 Score=166.74 Aligned_cols=232 Identities=26% Similarity=0.405 Sum_probs=189.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH----HCCCCcCCCCCCCCCCeeeecCCCCcccCCCC
Q 020322 86 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 161 (327)
Q Consensus 86 s~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~----~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~ 161 (327)
..+...-+|+|+++..++-.++.+.|+||||-.||+..++...+ +.|... ..+||+. .|-|.+..|+.|+
T Consensus 81 ~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~a----Gi~FPtG--~SlN~cAAHyTpN 154 (397)
T KOG2775|consen 81 ESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNA----GIGFPTG--CSLNHCAAHYTPN 154 (397)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccc----cccCCCc--ccccchhhhcCCC
Confidence 44556679999999999999999999999999999998876544 344432 2578876 4789999999985
Q ss_pred ---CCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCC
Q 020322 162 ---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYN 238 (327)
Q Consensus 162 ---~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G 238 (327)
..+|+.+|+..||+|.+.+|--.|++.|+.+ .+....|+.++++|-..+|+...-.++++||+++++++++++.
T Consensus 155 aGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyE 231 (397)
T KOG2775|consen 155 AGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYE 231 (397)
T ss_pred CCCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheE
Confidence 4679999999999999999999999999999 4467789999999999999999999999999999999999865
Q ss_pred Cc---------eecceeeeecccc-cccCCccccccCCCCccccCCcEEEEcceeecCCCCCccc---------------
Q 020322 239 YG---------VVRQFVGHGIGRV-FHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMW--------------- 293 (327)
Q Consensus 239 ~~---------~~~~~~GHgiG~~-~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~--------------- 293 (327)
.. .++++.||+|+.. +|-.-.++...+++.+.|++|..|+||..-+.|.+-+...
T Consensus 232 vEi~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIETFgSTGkG~v~ddmecSHymkn~~~~~v 311 (397)
T KOG2775|consen 232 VEINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIETFGSTGKGYVHDDMECSHYMKNFELGHV 311 (397)
T ss_pred EEeCCceecceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEeeccCCcceecCCcccchhhhhcccccc
Confidence 43 2678899999984 6777666666678899999999999998777665543100
Q ss_pred --------------CCCce----------------------------E-------EeeCCceeEEEeEEEEEcCCCeEec
Q 020322 294 --------------DDNWT----------------------------I-------VTEDGSLSAQFEHTILITRDGAEIL 324 (327)
Q Consensus 294 --------------~d~w~----------------------------~-------~~~~g~~g~~~EdtvlVt~~G~e~L 324 (327)
.++++ + ..-+|.+.+||||||+..+.+-|++
T Consensus 312 plrl~~~K~ll~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~ytAQfEHTIll~pt~KEVv 391 (397)
T KOG2775|consen 312 PLRLQRSKGLLNTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYTAQFEHTILLSPTGKEVV 391 (397)
T ss_pred ccccHHHHHHHHHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCcceeeeeceeeEecchhcchh
Confidence 01111 1 1226999999999999999999999
Q ss_pred CC
Q 020322 325 TQ 326 (327)
Q Consensus 325 T~ 326 (327)
|+
T Consensus 392 sr 393 (397)
T KOG2775|consen 392 SR 393 (397)
T ss_pred cc
Confidence 85
No 37
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.80 E-value=4.8e-18 Score=152.71 Aligned_cols=243 Identities=21% Similarity=0.407 Sum_probs=190.3
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHC--CCCcCC---CCCCCCCCeeeecCCCCcc
Q 020322 82 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN--GAYPSP---LGYGGFPKSVCTSVNECIC 156 (327)
Q Consensus 82 r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~--g~~~~~---~~~~~~~~~v~~g~n~~~~ 156 (327)
..+-++.-+.+||-|++|+.+++..+.+.+.||.+..||+..-..++.+. ..|... .-.-.||+ |+++|+++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 34678899999999999999999999999999999999999888777654 122221 11135775 568999999
Q ss_pred cCCCC----CCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHh
Q 020322 157 HGIPD----SRALEDGDTINIDVTVYLNGYHGDTSATFFCGD-----VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIG 227 (327)
Q Consensus 157 h~~p~----~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~-----~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~ 227 (327)
|+.|- +..|++||+|.||+|++++||.+.++.|++|+. .+....+++.+++.|.+++++.+|||.+-.+|.
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 99873 578999999999999999999999999999976 446788999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceecceeeeeccccccc-CCccc-cc-----cCCCCccccCCcEEEEcceeecCCCCCcccCC-----
Q 020322 228 KTIQDHADRYNYGVVRQFVGHGIGRVFHA-DPVVL-HY-----RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDD----- 295 (327)
Q Consensus 228 ~~~~~~~~~~G~~~~~~~~GHgiG~~~he-~p~i~-~~-----~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d----- 295 (327)
+++.+.+.++++..+.+...|..=..+-+ .+.|. +. ...+...++.+.|+++....+.+++....-++
T Consensus 171 ~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg~~~~K~~~~~~~t~ 250 (398)
T KOG2776|consen 171 RAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTGEGSPKEGDDRAPTI 250 (398)
T ss_pred HHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecCCCccccccccccee
Confidence 99999999999887666666655443322 22222 21 11355688999999998888777663321100
Q ss_pred ---------------------------------------------------------Cce-EEeeCCceeEEEeEEEEEc
Q 020322 296 ---------------------------------------------------------NWT-IVTEDGSLSAQFEHTILIT 317 (327)
Q Consensus 296 ---------------------------------------------------------~w~-~~~~~g~~g~~~EdtvlVt 317 (327)
.+. ...++|...+|++.|||..
T Consensus 251 y~kd~~~~y~LKlKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~vaqfk~Tvllm 330 (398)
T KOG2776|consen 251 YYKDESVSYMLKLKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEFVAQFKFTVLLM 330 (398)
T ss_pred EEeccchHHHHHHHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcchhhheeeEEEec
Confidence 111 2557899999999999999
Q ss_pred CCCeEecCC
Q 020322 318 RDGAEILTQ 326 (327)
Q Consensus 318 ~~G~e~LT~ 326 (327)
++|.-.||.
T Consensus 331 Png~~~l~~ 339 (398)
T KOG2776|consen 331 PNGSLRLTG 339 (398)
T ss_pred cCCCccccC
Confidence 999888774
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.77 E-value=6e-18 Score=160.98 Aligned_cols=237 Identities=16% Similarity=0.153 Sum_probs=176.6
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhc----CCC--CCHHHHHHHHHHHHHH----------CC-CCcCC
Q 020322 75 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLV----KPG--ITTDEIDKAVHQMIID----------NG-AYPSP 137 (327)
Q Consensus 75 ~~~~~~~r~vKs~~EI~~~r~A~~ia~~~~~~~~~~i----~~G--~te~ei~~~~~~~~~~----------~g-~~~~~ 137 (327)
..-+..+-.+|+.+||+.+|.+++..+..|+...+.+ ..+ +|...+...+...+-+ .| ..-..
T Consensus 161 slgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~~~d~ 240 (1001)
T COG5406 161 SLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDIDLDQ 240 (1001)
T ss_pred hhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccccccchhh
Confidence 3445667789999999999999999999998544322 111 3444444444332211 11 11111
Q ss_pred CCCCCCCCeeeecCCCC-cccCCCCCCCCCCCCEEEEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHH
Q 020322 138 LGYGGFPKSVCTSVNEC-ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISV 216 (327)
Q Consensus 138 ~~~~~~~~~v~~g~n~~-~~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~ 216 (327)
+. ..|.+++++|..-- .+.....++.+. ||+|++.+|.+|+|||++++||+++ +|+.+|++.|+.++.+|...+..
T Consensus 241 le-w~ytpiiqsg~~~Dl~psa~s~~~~l~-gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~i~~~ 317 (1001)
T COG5406 241 LE-WCYTPIIQSGGSIDLTPSAFSFPMELT-GDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKYILGL 317 (1001)
T ss_pred hh-hhcchhhccCceeecccccccCchhhc-CceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHHHHhh
Confidence 22 23677788876533 333444555554 8999999999999999999999999 78999999999999999999999
Q ss_pred hcCCCchHHHhHHHHHHHHhCCCceecce---eeeecccccccCCccccccCCCCccccCCcEEEEcceeecCCCCCccc
Q 020322 217 CAPGMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMW 293 (327)
Q Consensus 217 ~kpG~~~~ei~~~~~~~~~~~G~~~~~~~---~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~ 293 (327)
+|||...++|+..+.+++.+.|....++| +|-+||+.+.+...+.+.. ++++|+.||+|.|.-++..-
T Consensus 318 ~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nvk--n~r~lq~g~~fnis~gf~nl------- 388 (1001)
T COG5406 318 VRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNVK--NGRVLQAGCIFNISLGFGNL------- 388 (1001)
T ss_pred cCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceecc--CCceeccccEEEEeeccccc-------
Confidence 99999999999999999999998876666 7999999999888777654 45899999999997765421
Q ss_pred CCCceEEeeCCceeEEEeEEEEEcCCCeEecCCC
Q 020322 294 DDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 327 (327)
Q Consensus 294 ~d~w~~~~~~g~~g~~~EdtvlVt~~G~e~LT~~ 327 (327)
.+. ...+.+..++-||+-|+-+-+.++|.+
T Consensus 389 ~~~----~~~Nnyal~l~dt~qi~ls~p~~~t~~ 418 (1001)
T COG5406 389 INP----HPKNNYALLLIDTEQISLSNPIVFTDS 418 (1001)
T ss_pred CCC----CcccchhhhhccceEeecCCceecccC
Confidence 000 012457889999999998889998864
No 39
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.66 E-value=0.00056 Score=60.81 Aligned_cols=99 Identities=12% Similarity=0.172 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceec-ceeee----ecccccccCCccccccCCCCccc
Q 020322 197 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR-QFVGH----GIGRVFHADPVVLHYRNNDHGRM 271 (327)
Q Consensus 197 ~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~-~~~GH----giG~~~he~p~i~~~~~~~~~~l 271 (327)
+.+|++.+.+.+++.+++++++||++-.||..++.+.+.+.|..... .+.++ ..|.. ..+.|+. ..+.+|
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~----~~~~h~~-~~~~~l 76 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVN----EVVCHGI-PDDRVL 76 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCC----CceeCCC-CCCccc
Confidence 35788999999999999999999999999999999999999875211 00011 11111 1122221 246799
Q ss_pred cCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcC
Q 020322 272 VLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 318 (327)
Q Consensus 272 ~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~ 318 (327)
++|+++.++.+... +++.+.+..|+.+.+
T Consensus 77 ~~Gd~v~id~g~~~------------------~GY~ad~~RT~~~G~ 105 (238)
T cd01086 77 KDGDIVNIDVGVEL------------------DGYHGDSARTFIVGE 105 (238)
T ss_pred CCCCEEEEEEEEEE------------------CCEEEEEEEEEECCC
Confidence 99999999998765 346779999999865
No 40
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.61 E-value=0.00051 Score=65.61 Aligned_cols=115 Identities=10% Similarity=0.114 Sum_probs=81.8
Q ss_pred cEEeeeeeEEEccCCC--HHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCce-ecceeee----ecccc
Q 020322 181 GYHGDTSATFFCGDVD--DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGH----GIGRV 253 (327)
Q Consensus 181 Gy~~d~~RT~~vG~~~--~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~-~~~~~GH----giG~~ 253 (327)
..++++.++..+..+. +.+|++.+.+.++++++.+++|||++-.||.+++++.+.+.|... ..++.++ ..|.+
T Consensus 126 ~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N 205 (396)
T PLN03158 126 EPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVN 205 (396)
T ss_pred ccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeeccc
Confidence 3456777888886655 567788889999999999999999999999999999987776321 1111111 11211
Q ss_pred cccCCccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcC
Q 020322 254 FHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 318 (327)
Q Consensus 254 ~he~p~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~ 318 (327)
..+.|+. .++.+|++|+++.|+.+.+. .++..-+..|++|.+
T Consensus 206 ----~~i~Hgi-p~~r~L~~GDiV~iDvg~~~------------------~GY~aD~tRT~~VG~ 247 (396)
T PLN03158 206 ----EVICHGI-PDARKLEDGDIVNVDVTVYY------------------KGCHGDLNETFFVGN 247 (396)
T ss_pred ----ccccCCC-CCCccCCCCCEEEEEEeEEE------------------CCEEEeEEeEEEcCC
Confidence 1233332 24578999999999999876 346678899999864
No 41
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.31 E-value=0.0048 Score=52.84 Aligned_cols=102 Identities=21% Similarity=0.257 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCE
Q 020322 91 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 170 (327)
Q Consensus 91 ~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~ 170 (327)
+.+|++.+.+.++++.+.+.++||++..||...+.+.+.+.|.........++ .+.....+...-....+.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh--~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH--GIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc--ccCcccCCCCCcCCCCCCCcCCCCE
Confidence 57888999999999999999999999999999999999999874211111111 1111111111101124678999999
Q ss_pred EEEEEeeeeC-cEEeeeeeEEEccC
Q 020322 171 INIDVTVYLN-GYHGDTSATFFCGD 194 (327)
Q Consensus 171 v~vd~g~~~~-Gy~~d~~RT~~vG~ 194 (327)
+.++.+.... ++..-+..|+++.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999999876 58889999999854
No 42
>PRK05716 methionine aminopeptidase; Validated
Probab=97.30 E-value=0.0027 Score=56.92 Aligned_cols=101 Identities=11% Similarity=0.087 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCcee-cceeeeecccccccCCccccccCCCCccccCCcE
Q 020322 198 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV-RQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQT 276 (327)
Q Consensus 198 ~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~-~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~Gmv 276 (327)
.+|++.+.+.++++++++.++||++-.||..++.+.+.+.|.... .++.++..-........+.++. .++.+|++|++
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~-~~~~~l~~Gd~ 91 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGI-PSDKVLKEGDI 91 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCC-CCCcccCCCCE
Confidence 457888889999999999999999999999999999999886421 0111110000000011122321 24579999999
Q ss_pred EEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEc
Q 020322 277 FTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 317 (327)
Q Consensus 277 ftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt 317 (327)
+.++.+... +++.+-+..|+.+.
T Consensus 92 v~id~g~~~------------------~gY~~d~~RT~~vG 114 (252)
T PRK05716 92 VNIDVTVIK------------------DGYHGDTSRTFGVG 114 (252)
T ss_pred EEEEEEEEE------------------CCEEEEeEEEEECC
Confidence 999999865 35678888888874
No 43
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.25 E-value=0.003 Score=58.14 Aligned_cols=97 Identities=13% Similarity=0.194 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceecceeeeecccccccCCccccccC--CCCccccCC
Q 020322 197 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMVLN 274 (327)
Q Consensus 197 ~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~--~~~~~l~~G 274 (327)
+..+++.+.+.++++++++.++||++..||.+.+++.+.+.|... ++..++... +...|+.+ +++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~-----afp~~is~n--~~~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP-----AFPVNLSIN--ECAAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCceeccC--CEeeCCCCCCCCCcccCCC
Confidence 357888999999999999999999999999999999999988541 122222221 12334422 356799999
Q ss_pred cEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcC
Q 020322 275 QTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 318 (327)
Q Consensus 275 mvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~ 318 (327)
+++.++.+... .++.+-+..|+.+.+
T Consensus 75 DvV~iD~G~~~------------------dGY~sD~arT~~vg~ 100 (291)
T cd01088 75 DVVKLDFGAHV------------------DGYIADSAFTVDFDP 100 (291)
T ss_pred CEEEEEEEEEE------------------CCEEEEEEEEEecCh
Confidence 99999999865 235666777777653
No 44
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.22 E-value=0.0032 Score=56.55 Aligned_cols=110 Identities=11% Similarity=0.094 Sum_probs=75.4
Q ss_pred eeeEEEccCCCH--HHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceecc-eeee----ecccccccCC
Q 020322 186 TSATFFCGDVDD--EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ-FVGH----GIGRVFHADP 258 (327)
Q Consensus 186 ~~RT~~vG~~~~--~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~-~~GH----giG~~~he~p 258 (327)
-.|++.+-.+.+ ..|++.+.+.+++.++++.++||++-.||...+...+.+.|...... ..++ ..|.+ .
T Consensus 4 ~~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n----~ 79 (255)
T PRK12896 4 EGRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVN----E 79 (255)
T ss_pred cCCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCC----C
Confidence 357777755443 45677888888888999999999999999999999999988752110 1111 11111 1
Q ss_pred ccccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcC
Q 020322 259 VVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 318 (327)
Q Consensus 259 ~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~ 318 (327)
.+.|+. .++.+|++|.++.++.+... +++.+-+..|+.+.+
T Consensus 80 ~~~h~~-p~~~~l~~Gd~v~iD~g~~~------------------~gY~aD~~RT~~vG~ 120 (255)
T PRK12896 80 EVAHGI-PGPRVIKDGDLVNIDVSAYL------------------DGYHGDTGITFAVGP 120 (255)
T ss_pred eeEecC-CCCccCCCCCEEEEEEeEEE------------------CcEEEeeEEEEECCC
Confidence 122322 23478999999999998865 346777888888753
No 45
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.12 E-value=0.0086 Score=51.78 Aligned_cols=100 Identities=23% Similarity=0.271 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCC-CCCCCCCCC
Q 020322 91 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGD 169 (327)
Q Consensus 91 ~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p-~~~~l~~Gd 169 (327)
+.+|++.+.+.++++.+.+.++||++-.||.+.+.+.+.+.|..+......++. +.....+. +.-.+ ++.+|++|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh~--iG~~~~e~-p~i~~~~~~~l~~gm 179 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGHG--VGLEVHEA-PYISPGSDDVLEEGM 179 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCccc--cCcccCcC-CCcCCCCCCCcCCCC
Confidence 356778889999999999999999999999999999999999743211111211 11111111 11112 468899999
Q ss_pred EEEEEEeeeeCc-EEeeeeeEEEcc
Q 020322 170 TINIDVTVYLNG-YHGDTSATFFCG 193 (327)
Q Consensus 170 ~v~vd~g~~~~G-y~~d~~RT~~vG 193 (327)
++.++.+....| +..-+..|++|.
T Consensus 180 v~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 180 VFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred EEEECCeEEecCCCEEEeeeEEEEC
Confidence 999998887544 345577888874
No 46
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=97.11 E-value=0.0057 Score=54.73 Aligned_cols=86 Identities=15% Similarity=0.149 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCce-ecceee--eecccccccCCccccccCCCCccccCC
Q 020322 198 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVG--HGIGRVFHADPVVLHYRNNDHGRMVLN 274 (327)
Q Consensus 198 ~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~-~~~~~G--HgiG~~~he~p~i~~~~~~~~~~l~~G 274 (327)
..|++-+.+.++++.+.+.++||++..||.+.+++++.++|.-. ..++-| ..+...+.+ .+.|+-++++.+|++|
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe--~v~HgiP~d~~vlk~G 90 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNE--VVAHGIPGDKKVLKEG 90 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhh--eeeecCCCCCcccCCC
Confidence 45667777888899999999999999999999999999866542 222222 222222221 2445544577899999
Q ss_pred cEEEEcceeec
Q 020322 275 QTFTIEPMLTI 285 (327)
Q Consensus 275 mvftiEP~i~~ 285 (327)
.++.|..++..
T Consensus 91 Div~IDvg~~~ 101 (255)
T COG0024 91 DIVKIDVGAHI 101 (255)
T ss_pred CEEEEEEEEEE
Confidence 99999999875
No 47
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=96.97 E-value=0.014 Score=52.14 Aligned_cols=102 Identities=18% Similarity=0.060 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccC--CCCCCCCCCCC
Q 020322 92 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG--IPDSRALEDGD 169 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~--~p~~~~l~~Gd 169 (327)
..|++...+.++++++++.++||++-.||...+.+.+.+.|..+. ..+.++...+..-+.-.++++ ..++.+|++|.
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gm 195 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGM 195 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCCccCcccCCCCccCCcCcCCCCCEecCCC
Confidence 356677778888899999999999999999999999999987542 122232221111111111211 12367899999
Q ss_pred EEEEEEeeee------------------CcEEeeeeeEEEccC
Q 020322 170 TINIDVTVYL------------------NGYHGDTSATFFCGD 194 (327)
Q Consensus 170 ~v~vd~g~~~------------------~Gy~~d~~RT~~vG~ 194 (327)
++.++.+.+. +++..-+..|++|.+
T Consensus 196 v~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 196 VFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred EEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 9999988765 346667788888844
No 48
>PRK15173 peptidase; Provisional
Probab=96.84 E-value=0.017 Score=53.94 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCC-CCCCCCCCCCE
Q 020322 92 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI-PDSRALEDGDT 170 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~-p~~~~l~~Gd~ 170 (327)
..|++.+++.++++++++.++||++-.||...+.+.+.+.|.......+.++......|..+. +... .++.+|++|.+
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~-P~i~~~~~~~Le~GMV 281 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEES-PFVSTHATESFTSGMV 281 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCC-CCCCCCCCCccCCCCE
Confidence 456777888899999999999999999999999999999886432211122221111222221 1111 24578999999
Q ss_pred EEEEEeeeeCc-EEeeeeeEEEccC
Q 020322 171 INIDVTVYLNG-YHGDTSATFFCGD 194 (327)
Q Consensus 171 v~vd~g~~~~G-y~~d~~RT~~vG~ 194 (327)
+.++.+.+..| +..-+..|++|.+
T Consensus 282 ~tiEPgiy~~g~ggvriEDtvlVTe 306 (323)
T PRK15173 282 LSLETPYYGYNLGSIMIEDMILINK 306 (323)
T ss_pred EEECCEEEcCCCcEEEEeeEEEEcC
Confidence 99999887433 3466889999843
No 49
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.75 E-value=0.016 Score=52.02 Aligned_cols=101 Identities=16% Similarity=0.121 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCC-C-CCCCCCCCCE
Q 020322 93 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI-P-DSRALEDGDT 170 (327)
Q Consensus 93 ~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~-p-~~~~l~~Gd~ 170 (327)
.|++.+++.++++.+++.++||++..|+...+.+.+.+.|.... .++.++...+..-+.-.+.+.. + +..+|++|.+
T Consensus 119 ~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv 197 (248)
T PRK12897 119 AEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMV 197 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEECccCCcccCCCccCCCCCCCCCCCcCCCCE
Confidence 55666788889999999999999999999999999999886432 2222222111111111112211 1 3467999999
Q ss_pred EEEEEeee-----------------eCc-EEeeeeeEEEccC
Q 020322 171 INIDVTVY-----------------LNG-YHGDTSATFFCGD 194 (327)
Q Consensus 171 v~vd~g~~-----------------~~G-y~~d~~RT~~vG~ 194 (327)
+.+.-+.. .+| +..-+..|++|.+
T Consensus 198 ~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 198 ITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred EEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 99998876 244 6778888888854
No 50
>PRK14575 putative peptidase; Provisional
Probab=96.67 E-value=0.024 Score=54.62 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCC--CcccCCCCCCCCCCCC
Q 020322 92 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIPDSRALEDGD 169 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~--~~~h~~p~~~~l~~Gd 169 (327)
..|++.+++.+++++++++++||++-.||.+.+.+.+.+.|.......+.++......|..+ .+.+ -++.+|++|.
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~--~~~~~Le~GM 363 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST--HATESFTSGM 363 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCCCCC--CCCCCcCCCC
Confidence 35677788889999999999999999999999999999988643221121221111112222 1111 2457899999
Q ss_pred EEEEEEeeeeCc-EEeeeeeEEEccC
Q 020322 170 TINIDVTVYLNG-YHGDTSATFFCGD 194 (327)
Q Consensus 170 ~v~vd~g~~~~G-y~~d~~RT~~vG~ 194 (327)
++.++.+.+..| +..-+..|++|.+
T Consensus 364 v~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 364 VLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred EEEECCeeecCCCcEEEEEeEEEEcC
Confidence 999999887544 3467889999954
No 51
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.65 E-value=0.028 Score=48.57 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHH-HHhCCCceecceeeeecccccccCCccccccCCCCccccCCc
Q 020322 197 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH-ADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQ 275 (327)
Q Consensus 197 ~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~-~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~Gm 275 (327)
+..|++.+.+.++++++++.++||++-.||...+.+. +.+.|.....+..-=+.|.. ..+.++.+ ++..|++|+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~----~~~~~~~~-~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPN----TDLPHYTP-TDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCC----CGETTTBC-CSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCc----ceecceec-cceeeecCC
Confidence 3578889999999999999999999999999999988 67777442221111112211 12233322 467899999
Q ss_pred EEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEc
Q 020322 276 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 317 (327)
Q Consensus 276 vftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt 317 (327)
++.++-+... +++...+..|+++.
T Consensus 76 ~v~id~~~~~------------------~gy~~d~~Rt~~~G 99 (207)
T PF00557_consen 76 IVIIDFGPRY------------------DGYHADIARTFVVG 99 (207)
T ss_dssp EEEEEEEEEE------------------TTEEEEEEEEEESS
T ss_pred cceeecccee------------------eeeEeeeeeEEEEe
Confidence 9999988765 34667778888763
No 52
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.62 E-value=0.038 Score=48.88 Aligned_cols=100 Identities=15% Similarity=0.120 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccC------CCCCCCC
Q 020322 92 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG------IPDSRAL 165 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~------~p~~~~l 165 (327)
..|++..++.++++++.+.++||++-.||++.+.+.+.++|...... +++...+.....+ .+|. ..++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he-~~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHY-YGREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCccccccccc-CCCccccccCCCCCCcc
Confidence 36678888999999999999999999999999999999998653211 1111112111111 1111 1135889
Q ss_pred CCCCEEEEEEeeeeC----c-EEeeeeeEEEccC
Q 020322 166 EDGDTINIDVTVYLN----G-YHGDTSATFFCGD 194 (327)
Q Consensus 166 ~~Gd~v~vd~g~~~~----G-y~~d~~RT~~vG~ 194 (327)
++|.++.++-+.+.. | .-.-+..|++|.+
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 999999999988752 2 2334788888854
No 53
>PRK14576 putative endopeptidase; Provisional
Probab=96.62 E-value=0.03 Score=53.95 Aligned_cols=103 Identities=14% Similarity=0.072 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCC-CCCCCCCCC
Q 020322 91 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGD 169 (327)
Q Consensus 91 ~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p-~~~~l~~Gd 169 (327)
+..|++-+++.++++++++++|||++-.||...+.+.+.+.|.......+.++......|..+. +.-.+ ++.+|++|.
T Consensus 284 ~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~-P~i~~~~~~~Le~GM 362 (405)
T PRK14576 284 KLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEV-PFVSTQATETFCPGM 362 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcC-CCcCCCCCCccCCCC
Confidence 3466778888999999999999999999999999999999986432212222221111233221 22222 467899999
Q ss_pred EEEEEEeeeeCc-EEeeeeeEEEccC
Q 020322 170 TINIDVTVYLNG-YHGDTSATFFCGD 194 (327)
Q Consensus 170 ~v~vd~g~~~~G-y~~d~~RT~~vG~ 194 (327)
++.++.+.+..| ...-+..|++|.+
T Consensus 363 v~~vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 363 VLSLETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred EEEECCceeecCCCEEEEeeEEEECC
Confidence 999997765443 3445788998843
No 54
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.57 E-value=0.027 Score=53.91 Aligned_cols=103 Identities=14% Similarity=0.207 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceecc--eeeeeccc--ccccCCccccccC---CCCcc
Q 020322 198 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ--FVGHGIGR--VFHADPVVLHYRN---NDHGR 270 (327)
Q Consensus 198 ~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~--~~GHgiG~--~~he~p~i~~~~~---~~~~~ 270 (327)
..+++-+.+.++++.+++.++||++..||.+.+++.+++.+-..+.. ...+|++. .+--...+.|+.+ +++.+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~P~~~d~~~~ 100 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFSPLKSDQDYI 100 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCCCCCCCCCcC
Confidence 45677777888899999999999999999999988888754221111 01112111 0111122344433 23479
Q ss_pred ccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcC
Q 020322 271 MVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 318 (327)
Q Consensus 271 l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~ 318 (327)
|++|.++.|+.+... .++.+-+.+|+.|.+
T Consensus 101 Lk~GDvVkIDlG~~i------------------dGY~aD~arTv~vG~ 130 (389)
T TIGR00495 101 LKEGDVVKIDLGCHI------------------DGFIALVAHTFVVGV 130 (389)
T ss_pred cCCCCEEEEEEEEEE------------------CCEEEEEEEEEEECC
Confidence 999999999999876 346788899999974
No 55
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.54 E-value=0.032 Score=51.27 Aligned_cols=88 Identities=17% Similarity=0.161 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCC-CCCCCCCCCE
Q 020322 92 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 170 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p-~~~~l~~Gd~ 170 (327)
..|++.+++.++++++++.++||++-.||...+.+.+.+.|.... ..+.++...+..=+.-.+.+..+ ++.+|++|.+
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV 237 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMI 237 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccCCcCccccCCCcccCcCCCCCCEeCCCCE
Confidence 456778888899999999999999999999999999999886532 12223322111111111222222 2467999999
Q ss_pred EEEEEeeeeC
Q 020322 171 INIDVTVYLN 180 (327)
Q Consensus 171 v~vd~g~~~~ 180 (327)
+.++-+....
T Consensus 238 ~~iEP~i~~~ 247 (291)
T PRK12318 238 FTIEPMINVG 247 (291)
T ss_pred EEECCEEEcC
Confidence 9999877654
No 56
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.51 E-value=0.034 Score=49.74 Aligned_cols=102 Identities=17% Similarity=0.135 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC--CcCCCCCCCCCCeeeecCCCCcccCCC-CCCCCCC
Q 020322 91 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPSPLGYGGFPKSVCTSVNECICHGIP-DSRALED 167 (327)
Q Consensus 91 ~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~--~~~~~~~~~~~~~v~~g~n~~~~h~~p-~~~~l~~ 167 (327)
+..|++.+++.++.+++++.++||++-.||...+.+.+.+.+. .+......|+. +....++....-.| ++++|++
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHg--iGle~hE~~~~l~~~~~~~L~~ 196 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFG--IGLEFRESSLIINAKNDRKLKK 196 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcCCcccc--cCcccccCccccCCCCCCCcCC
Confidence 3566778888999999999999999999999999999988752 11110011222 21222221111112 3578999
Q ss_pred CCEEEEEEeee-e----------CcEEeeeeeEEEccC
Q 020322 168 GDTINIDVTVY-L----------NGYHGDTSATFFCGD 194 (327)
Q Consensus 168 Gd~v~vd~g~~-~----------~Gy~~d~~RT~~vG~ 194 (327)
|.++.+..|.. . +.|..-++.|++|.+
T Consensus 197 GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 197 GMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 99999999986 3 257888999999954
No 57
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.49 E-value=0.03 Score=51.31 Aligned_cols=101 Identities=10% Similarity=0.041 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccC-CC-CCCCCCCCC
Q 020322 92 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG-IP-DSRALEDGD 169 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~-~p-~~~~l~~Gd 169 (327)
..|++.+++.++++++++.++||++-.||.+.+.+.+.+.|... ..++.++...+..-+.-.+++. .+ .+.+|++|.
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GM 227 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGM 227 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCC
Confidence 35788889999999999999999999999999999998887643 2222222211111010011221 12 346799999
Q ss_pred EEEEEEeeeeC-------------------cEEeeeeeEEEcc
Q 020322 170 TINIDVTVYLN-------------------GYHGDTSATFFCG 193 (327)
Q Consensus 170 ~v~vd~g~~~~-------------------Gy~~d~~RT~~vG 193 (327)
++.|.-+.+.. +...-+..|++|.
T Consensus 228 V~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT 270 (286)
T PRK07281 228 VLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVIT 270 (286)
T ss_pred EEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEe
Confidence 99999888642 2335677788874
No 58
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.45 E-value=0.062 Score=49.39 Aligned_cols=95 Identities=20% Similarity=0.194 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccC--------CCCCC
Q 020322 92 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG--------IPDSR 163 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~--------~p~~~ 163 (327)
..+++.+.+.++++.+++.++||++-.||.+.+++.+.+.|..+. .+..++. .|.. ..|. ..++.
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHg----iG~~--~~he~p~ip~~~~~~~~ 174 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHG----LERY--ELHAGPSIPNYDEGGGV 174 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccC----cCCC--cccCCCccCccCCCCCc
Confidence 456788888889999999999999999999999999999997653 2222222 1211 1222 12367
Q ss_pred CCCCCCEEEEEEeee-eCcEEeeeeeEEEcc
Q 020322 164 ALEDGDTINIDVTVY-LNGYHGDTSATFFCG 193 (327)
Q Consensus 164 ~l~~Gd~v~vd~g~~-~~Gy~~d~~RT~~vG 193 (327)
+|++|+++.|+.... -.|+..|-.+|-+..
T Consensus 175 ~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 175 KLEEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred eeCCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 899999999998765 477888888877764
No 59
>PRK09795 aminopeptidase; Provisional
Probab=96.43 E-value=0.056 Score=51.25 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCC-CCCCC
Q 020322 87 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRAL 165 (327)
Q Consensus 87 ~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p-~~~~l 165 (327)
+++-+.++++-+++.++.+++.+.++||++-.||++.+.+.+.+.|.........|+. +.....+ .+.-.| ++.+|
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~GHg--iGl~~he-~p~i~~~~~~~l 312 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGHA--IGIEVHE-DPRFSPRDTTTL 312 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCCcc--CCccccC-CCCcCCCCCCCc
Confidence 5555678889999999999999999999999999999999999988643211111221 1111111 111112 46889
Q ss_pred CCCCEEEEEEeeeeCcE-EeeeeeEEEcc
Q 020322 166 EDGDTINIDVTVYLNGY-HGDTSATFFCG 193 (327)
Q Consensus 166 ~~Gd~v~vd~g~~~~Gy-~~d~~RT~~vG 193 (327)
++|.++.|+.+.+..|. ..-+.-|++|.
T Consensus 313 ~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 313 QPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred CCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 99999999999876553 45678888884
No 60
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.31 E-value=0.044 Score=52.56 Aligned_cols=101 Identities=16% Similarity=0.256 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCC--CCcccCCC-CCCCCCCC
Q 020322 92 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN--ECICHGIP-DSRALEDG 168 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n--~~~~h~~p-~~~~l~~G 168 (327)
.+|++.+++.++.++++++++||+|-.||++.+.+.+.+.|.... ...+++..+..-++ +..+.-.| ++.+|++|
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~GhgiGl~~~~~~~e~~~~l~~~~~~~L~~G 348 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGYPIGLSYPPDWGERTMSLRPGDNTVLKPG 348 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCceeeeccCcCCCCCCccccccCCCCceecCC
Confidence 466778889999999999999999999999999999999886531 12233221111000 00001112 35789999
Q ss_pred CEEEEEEeeeeCcEEeeeeeEEEccC
Q 020322 169 DTINIDVTVYLNGYHGDTSATFFCGD 194 (327)
Q Consensus 169 d~v~vd~g~~~~Gy~~d~~RT~~vG~ 194 (327)
.++.++-+.+..|+..-+.-|++|.+
T Consensus 349 Mv~tvEpgiy~~~~Gvried~v~VT~ 374 (391)
T TIGR02993 349 MTFHFMTGLWMEDWGLEITESILITE 374 (391)
T ss_pred CEEEEcceeEeCCCCeEEeeEEEECC
Confidence 99999999988777778889999843
No 61
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.30 E-value=0.061 Score=49.56 Aligned_cols=95 Identities=9% Similarity=0.095 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCce-ecceeeeecccccccCCccccccC--CCCccccCC
Q 020322 198 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGHGIGRVFHADPVVLHYRN--NDHGRMVLN 274 (327)
Q Consensus 198 ~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~-~~~~~GHgiG~~~he~p~i~~~~~--~~~~~l~~G 274 (327)
..+++-+.+.++++.+++.++||++..||.+.+++.+.+.|... ++.. +.. .....|+.+ +++.+|++|
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~aFp~~----vs~----n~~~~H~~p~~~d~~~l~~G 78 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPAFPCN----ISI----NECAAHFTPKAGDKTVFKDG 78 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCCCCcc----eec----CCEeeCCCCCCCcCccCCCC
Confidence 46778888899999999999999999999999999999988542 1111 111 111223221 345689999
Q ss_pred cEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcC
Q 020322 275 QTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 318 (327)
Q Consensus 275 mvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~ 318 (327)
.++.|+.+... .++.+-+..|+.+.+
T Consensus 79 DvV~iD~G~~~------------------dGY~aD~arT~~vG~ 104 (295)
T TIGR00501 79 DVVKLDLGAHV------------------DGYIADTAITVDLGD 104 (295)
T ss_pred CEEEEEEeEEE------------------CCEEEEEEEEEEeCc
Confidence 99999998865 346777788888754
No 62
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.08 E-value=0.032 Score=50.29 Aligned_cols=85 Identities=13% Similarity=0.210 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCce-ecceeeee--cccccccCCccccccCCCCccccCC
Q 020322 198 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGHG--IGRVFHADPVVLHYRNNDHGRMVLN 274 (327)
Q Consensus 198 ~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~-~~~~~GHg--iG~~~he~p~i~~~~~~~~~~l~~G 274 (327)
.+|+.-+.++++++.|-.++|||+|-.||++++.+..-+.|.-+ --++.|.. +-..+.| .|-|.- -+.+.|+.|
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNE--viCHGI-PD~RpLedG 200 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNE--VICHGI-PDSRPLEDG 200 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhh--eeecCC-CCcCcCCCC
Confidence 45677778899999999999999999999999999877765321 11111110 0001111 122211 245799999
Q ss_pred cEEEEcceeec
Q 020322 275 QTFTIEPMLTI 285 (327)
Q Consensus 275 mvftiEP~i~~ 285 (327)
..+.|+..+|.
T Consensus 201 DIvNiDVtvY~ 211 (369)
T KOG2738|consen 201 DIVNIDVTVYL 211 (369)
T ss_pred CEEeEEEEEEe
Confidence 99999999987
No 63
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.06 E-value=0.082 Score=47.08 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCC----CCc------------CCCCCCCCCCeeeecCCCCc
Q 020322 92 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG----AYP------------SPLGYGGFPKSVCTSVNECI 155 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g----~~~------------~~~~~~~~~~~v~~g~n~~~ 155 (327)
..+++.+.+.++++++++.++||++-.||.+.+.+.+.+.+ ..+ ..+..+++...+.....+ .
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e-~ 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHD-V 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCccccc-C
Confidence 45667778888999999999999999999999988887653 211 011001111112112222 1
Q ss_pred ccC--CC-CCCCCCCCCEEEEEEeeeeCc-----------EEeeeeeEEEccC
Q 020322 156 CHG--IP-DSRALEDGDTINIDVTVYLNG-----------YHGDTSATFFCGD 194 (327)
Q Consensus 156 ~h~--~p-~~~~l~~Gd~v~vd~g~~~~G-----------y~~d~~RT~~vG~ 194 (327)
++. .+ ++.+|++|.++.+..+.+..+ +..-+..|++|.+
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 211 22 467899999999999988654 6777888998843
No 64
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=95.99 E-value=0.11 Score=45.86 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceecc--eeeeecccc--cccCCccccccC---CCCcc
Q 020322 198 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ--FVGHGIGRV--FHADPVVLHYRN---NDHGR 270 (327)
Q Consensus 198 ~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~--~~GHgiG~~--~he~p~i~~~~~---~~~~~ 270 (327)
..|++-+.+.++++.+++.++||++-.||...+++.+.+..-..++. ....+++.. +--...+.|+.+ .++.+
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~~~ 82 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDATYT 82 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCCcc
Confidence 56888899999999999999999999999888777777632111111 001111100 000111222211 35678
Q ss_pred ccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcC
Q 020322 271 MVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 318 (327)
Q Consensus 271 l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~ 318 (327)
|++|.++.|+.+... .++.+-+..|+.|.+
T Consensus 83 l~~Gd~v~iD~g~~~------------------~GY~sD~tRT~~vG~ 112 (228)
T cd01089 83 LKDGDVVKIDLGCHI------------------DGYIAVVAHTIVVGA 112 (228)
T ss_pred cCCCCEEEEEEEEEE------------------CCEEEEEEEEEEeCC
Confidence 999999999988765 346777888998864
No 65
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=95.25 E-value=0.25 Score=47.21 Aligned_cols=97 Identities=24% Similarity=0.256 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCC------CCCCCC
Q 020322 93 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP------DSRALE 166 (327)
Q Consensus 93 ~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p------~~~~l~ 166 (327)
.|+.-.+..++++++.++++||++-.|+++...+.+.+.|...... +++...+ | ...-.|-.| ++.+|+
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~--h~~GHgv--G-~~l~vhE~p~~~~~~~~~~L~ 338 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFL--HGTGHGV--G-FVLDVHEHPQYLSPGSDTTLE 338 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccccc--CCccccC--C-CCcccCcCccccCCCCCcccc
Confidence 3467778999999999999999999999999999999976533211 1112112 2 111123333 467899
Q ss_pred CCCEEEEEEeeee-CcEEeeeeeEEEccC
Q 020322 167 DGDTINIDVTVYL-NGYHGDTSATFFCGD 194 (327)
Q Consensus 167 ~Gd~v~vd~g~~~-~Gy~~d~~RT~~vG~ 194 (327)
+|-++.++.|.++ +.+-.-+..+++|.+
T Consensus 339 ~GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 339 PGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred CCcEEEeccccccCCCceEEEEEEEEEcC
Confidence 9999999999774 668999999999965
No 66
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=95.23 E-value=0.17 Score=49.32 Aligned_cols=96 Identities=16% Similarity=0.196 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHh----CCCceecceeeeecccccccCCccccccC--CCCcccc
Q 020322 199 ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR----YNYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMV 272 (327)
Q Consensus 199 ~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~----~G~~~~~~~~GHgiG~~~he~p~i~~~~~--~~~~~l~ 272 (327)
.+++-+.+..+++.+++.++||++..||...+++.+++ .|...-..| .-+++++ -...|+.+ +++.+|+
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aF-Pt~vS~N----~~aaH~tP~~gd~~vLk 235 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAF-PTGCSLN----HCAAHYTPNTGDKTVLT 235 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCC-CceeecC----ccccCCCCCCCCCcEec
Confidence 45666777788888889999999999999987775544 343210111 0122221 11234332 3467999
Q ss_pred CCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEc
Q 020322 273 LNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 317 (327)
Q Consensus 273 ~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt 317 (327)
.|.++.|+.+... .++-+-+..|+.+.
T Consensus 236 ~GDvVkID~G~~v------------------dGYiaD~ArTv~vg 262 (470)
T PTZ00053 236 YDDVCKLDFGTHV------------------NGRIIDCAFTVAFN 262 (470)
T ss_pred CCCeEEEEEeEEE------------------CCEEEeEEEEEEeC
Confidence 9999999999875 34566677888774
No 67
>PRK10879 proline aminopeptidase P II; Provisional
Probab=93.58 E-value=0.96 Score=44.12 Aligned_cols=102 Identities=17% Similarity=0.209 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH----HCCCCcCCC-------CC-CCCCCeee--ecCCC-Cccc
Q 020322 93 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSPL-------GY-GGFPKSVC--TSVNE-CICH 157 (327)
Q Consensus 93 ~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~----~~g~~~~~~-------~~-~~~~~~v~--~g~n~-~~~h 157 (327)
.|++-+++.++.+++++.++||++-.+|...+.+.+. +.|.-+... .+ ..|+..+. .|.+- -.++
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~ 363 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGV 363 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCC
Confidence 4566778888899999999999999999888775543 344322100 00 01222111 12210 1111
Q ss_pred CCC-CCCCCCCCCEEEEEEeeeeC----------cEEeeeeeEEEccC
Q 020322 158 GIP-DSRALEDGDTINIDVTVYLN----------GYHGDTSATFFCGD 194 (327)
Q Consensus 158 ~~p-~~~~l~~Gd~v~vd~g~~~~----------Gy~~d~~RT~~vG~ 194 (327)
..+ .+++|++|-++.|+-|.+.. |+..-+.-|++|.+
T Consensus 364 ~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~ 411 (438)
T PRK10879 364 YGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITE 411 (438)
T ss_pred cCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECC
Confidence 112 35789999999999998753 56778889999953
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=91.41 E-value=4.7 Score=35.48 Aligned_cols=97 Identities=14% Similarity=0.078 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCC--cccCCCCCCCCCCCCEEE
Q 020322 96 SGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGIPDSRALEDGDTIN 172 (327)
Q Consensus 96 A~~ia~~~~~~~~~~i-~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~--~~h~~p~~~~l~~Gd~v~ 172 (327)
+..++.++..++.+.+ +||.+-.+|++.+++.+.+.|.+-. ...++.........+. +.+...++++|++|.++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~--h~~GHgIG~~l~~hE~P~i~~~~~~~~~L~~Gmvft 193 (224)
T cd01085 116 DYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYG--HGTGHGVGSFLNVHEGPQSISPAPNNVPLKAGMILS 193 (224)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCC--CCCCCCCCCCCcCCCCCCcCCcCCCCCCcCCCCEEE
Confidence 3344455556666655 5899999999999999988885310 0112211100111111 110112457899999999
Q ss_pred EEEeeeeC-cEEeeeeeEEEccC
Q 020322 173 IDVTVYLN-GYHGDTSATFFCGD 194 (327)
Q Consensus 173 vd~g~~~~-Gy~~d~~RT~~vG~ 194 (327)
++-+.+.. ....-+..|++|.+
T Consensus 194 iEP~iy~~g~~gvried~v~Vt~ 216 (224)
T cd01085 194 NEPGYYKEGKYGIRIENLVLVVE 216 (224)
T ss_pred ECCEeEeCCCeEEEeeEEEEEee
Confidence 99999854 45677888998843
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=90.41 E-value=3.2 Score=40.57 Aligned_cols=41 Identities=15% Similarity=0.044 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHH----HHCCCC
Q 020322 94 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAY 134 (327)
Q Consensus 94 r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~----~~~g~~ 134 (327)
++.-.++.++.+++++.++||++-.||...+.+.+ .+.|..
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~ 315 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIV 315 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 46778889999999999999999999998877554 445544
No 70
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=87.38 E-value=3 Score=38.96 Aligned_cols=93 Identities=16% Similarity=0.263 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHH--------Hh-----CCCce-----ecceeeeecccccccCCc
Q 020322 198 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA--------DR-----YNYGV-----VRQFVGHGIGRVFHADPV 259 (327)
Q Consensus 198 ~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~--------~~-----~G~~~-----~~~~~GHgiG~~~he~p~ 259 (327)
..+..=+.+..++...++.++||++..||-....+.+ ++ .|... +.+..+| -.|.
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~h-------~sPl 95 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVCH-------FSPL 95 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceeec-------cCcC
Confidence 3455667788888999999999999999876555444 32 12210 1222232 2343
Q ss_pred cccccCCCCccccCCcEEEEcceeecCCCCCcccCCCceEEeeCCceeEEEeEEEEEcCC
Q 020322 260 VLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRD 319 (327)
Q Consensus 260 i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~w~~~~~~g~~g~~~EdtvlVt~~ 319 (327)
.. +.+.+|++|.+.-|.-++.. .++.+-+.||++|++.
T Consensus 96 ks----d~~~~Lk~GDvVKIdLG~Hi------------------DGfiA~vaHT~VV~~~ 133 (398)
T KOG2776|consen 96 KS----DADYTLKEGDVVKIDLGVHI------------------DGFIALVAHTIVVGPA 133 (398)
T ss_pred CC----CCcccccCCCEEEEEeeeee------------------ccceeeeeeeEEeccC
Confidence 32 55789999999999999987 3467889999999864
No 71
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=85.30 E-value=7.9 Score=35.42 Aligned_cols=84 Identities=18% Similarity=0.264 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHH----HhCCCceecceeeeecccccccCCcccccc--CCCCcc
Q 020322 197 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA----DRYNYGVVRQFVGHGIGRVFHADPVVLHYR--NNDHGR 270 (327)
Q Consensus 197 ~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~----~~~G~~~~~~~~GHgiG~~~he~p~i~~~~--~~~~~~ 270 (327)
.+.++..++-+++...+.+.+|||+++-||-+.++... .+.|.. .-+|...|..+. ---+||. .++.++
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~---aGi~FPtG~SlN--~cAAHyTpNaGd~tV 160 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN---AGIGFPTGCSLN--HCAAHYTPNAGDKTV 160 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc---ccccCCCccccc--chhhhcCCCCCCcee
Confidence 45677777888888899999999999999988876654 455543 223444444321 1123332 267789
Q ss_pred ccCCcEEEEcceeec
Q 020322 271 MVLNQTFTIEPMLTI 285 (327)
Q Consensus 271 l~~GmvftiEP~i~~ 285 (327)
|+.+.|.-|.-+...
T Consensus 161 LqydDV~KiDfGthi 175 (397)
T KOG2775|consen 161 LKYDDVMKIDFGTHI 175 (397)
T ss_pred eeecceEEEeccccc
Confidence 999999999877754
No 72
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=67.53 E-value=1.4 Score=34.63 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=21.3
Q ss_pred CCccccccccccccccccCceecccccccc
Q 020322 3 GGACSLQLQPRLLSSFVGNRFIHSTQPLNQ 32 (327)
Q Consensus 3 ~~~~~~~~~~~~~~~~tg~~~~~~~~~~~~ 32 (327)
|-|.-++.++.|+.||||+.+...++++..
T Consensus 13 gid~lll~~~~ni~YltG~~~~~~~~~~~l 42 (132)
T PF01321_consen 13 GIDALLLTSPENIRYLTGFRWQPGERPVLL 42 (132)
T ss_dssp T-SEEEEESHHHHHHHHS--ST-TSSEEEE
T ss_pred CCCEEEEcChhhceEecCCCcCCCcceEEE
Confidence 346778899999999999987777777665
No 73
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=63.84 E-value=1.5 Score=44.33 Aligned_cols=31 Identities=10% Similarity=0.161 Sum_probs=27.8
Q ss_pred cccccccccc---ccccccCceeccccccccccc
Q 020322 5 ACSLQLQPRL---LSSFVGNRFIHSTQPLNQLFG 35 (327)
Q Consensus 5 ~~~~~~~~~~---~~~~tg~~~~~~~~~~~~l~~ 35 (327)
.||+|+|..- -+|||++.||...|+.++.++
T Consensus 76 qCp~C~k~~~~~~~s~fCsq~CFk~~w~~Hk~~h 109 (606)
T PLN03144 76 QCVGCVKAKLPVSKSYHCSPKCFSDAWRHHRVLH 109 (606)
T ss_pred cCccchhcCCCcCcceeeCHHHHHHHHHHHHHHH
Confidence 6999999997 499999999999999998554
No 74
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=63.80 E-value=26 Score=25.17 Aligned_cols=52 Identities=17% Similarity=0.304 Sum_probs=33.4
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCC-CcccCCCCCCCCCCCCEEEE
Q 020322 111 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 173 (327)
Q Consensus 111 i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~-~~~h~~p~~~~l~~Gd~v~v 173 (327)
++.|.|-.|++..++..+.+.=.+. ...|.+. ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~A-----------~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKYA-----------LVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCee-----------EEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 5678999999999998776543221 1112111 11233466788999999986
No 75
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=59.40 E-value=44 Score=34.59 Aligned_cols=101 Identities=19% Similarity=0.212 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCC-CCC-CCCCCeeeecCCCCcccCCCCCCCCCCCCE
Q 020322 93 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGY-GGFPKSVCTSVNECICHGIPDSRALEDGDT 170 (327)
Q Consensus 93 ~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~-~~~-~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~ 170 (327)
|.++-...-.+.+++...++||..-.+|...+...+.+.+-+-.+ +.. .||...+-.-.++.+ -..-++++|+.|.+
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~-inaKnd~~lk~gmv 337 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLV-INAKNDRVLKKGMV 337 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeeccccc-ccccchhhhccCcE
Confidence 445656667777888899999999999999999999887643211 000 112211111112211 12235699999999
Q ss_pred EEEEEeee-------eCcEEeeeeeEEEccC
Q 020322 171 INIDVTVY-------LNGYHGDTSATFFCGD 194 (327)
Q Consensus 171 v~vd~g~~-------~~Gy~~d~~RT~~vG~ 194 (327)
.+|.+|.. .+.|.--++-|+.||+
T Consensus 338 Fni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 338 FNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred EEEeeccccccCcccccchhhhccceeeecC
Confidence 99999873 3457777999999986
No 76
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=53.72 E-value=21 Score=26.23 Aligned_cols=51 Identities=29% Similarity=0.275 Sum_probs=36.9
Q ss_pred CCCCCCCCEEEEEEeeee-CcEEeeee------eEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Q 020322 162 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM 221 (327)
Q Consensus 162 ~~~l~~Gd~v~vd~g~~~-~Gy~~d~~------RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~ 221 (327)
++..++||.|.+++.+.. +|-.-|.+ .+|.+|.- ....+++.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~---------~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSG---------QVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSS---------SSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccC---------ccccchhhhcccccCCC
Confidence 356889999999999986 88777777 67777751 13346666677777774
No 77
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=51.35 E-value=1.2e+02 Score=25.99 Aligned_cols=75 Identities=15% Similarity=0.265 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHhCCCceecceeeeecccccccCCccccccCCCCccccCCc
Q 020322 196 DDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQ 275 (327)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~Gm 275 (327)
.++++...+.+.+=..+.+..--|..+..+.-+.+.+.+.+.. + .++.-|-+|-- .+|.. .++ +.|+
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~gk-~--~~yy~q~~GAi----RYVva-d~g-----ekgl 180 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKGK-G--SRYYSQTEGAI----RYVVA-DNG-----EKGL 180 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcCC-C--CcceeeccCce----EEEEe-cCC-----Ccee
Confidence 3677777777788888888999999999999999999888743 2 45566666632 12221 112 6799
Q ss_pred EEEEccee
Q 020322 276 TFTIEPML 283 (327)
Q Consensus 276 vftiEP~i 283 (327)
+|+|||.=
T Consensus 181 TFAVEPIK 188 (200)
T PF07305_consen 181 TFAVEPIK 188 (200)
T ss_pred EEEeeeee
Confidence 99999963
No 78
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=49.36 E-value=33 Score=20.60 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 020322 96 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 129 (327)
Q Consensus 96 A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~ 129 (327)
.+.+...++..+.+.++...|+.+|...+.+.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4677888899999999999999999999998764
No 79
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=48.35 E-value=69 Score=32.57 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeee--ecCCC---CcccCCCC
Q 020322 87 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNE---CICHGIPD 161 (327)
Q Consensus 87 ~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~--~g~n~---~~~h~~p~ 161 (327)
.+....|.-+-. +.+.+...++||.+-.+|...+...+.+.|-+-.+ .|-..+. +|... ..+-..-+
T Consensus 298 ~e~~~Ny~fl~~----lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn 369 (1001)
T COG5406 298 SEQQKNYEFLYM----LQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKN 369 (1001)
T ss_pred hHhhhhHHHHHH----HHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccC
Confidence 333444554433 34556668999999999999999999988764321 2222222 22221 12222345
Q ss_pred CCCCCCCCEEEEEEee
Q 020322 162 SRALEDGDTINIDVTV 177 (327)
Q Consensus 162 ~~~l~~Gd~v~vd~g~ 177 (327)
+|+||.|+++++.+|-
T Consensus 370 ~r~lq~g~~fnis~gf 385 (1001)
T COG5406 370 GRVLQAGCIFNISLGF 385 (1001)
T ss_pred CceeccccEEEEeecc
Confidence 6999999999999853
No 80
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=40.86 E-value=1e+02 Score=28.94 Aligned_cols=130 Identities=15% Similarity=0.250 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCC-CCCe-----------------
Q 020322 85 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGG-FPKS----------------- 146 (327)
Q Consensus 85 Ks~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~-~~~~----------------- 146 (327)
-|+.||+.+-++-......+......+-|..++.+|...++..+.+.-+.|.. |..+ |...
T Consensus 97 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPTi-NlN~lf~~~~~d~~~~~~LQ~~~~~l 175 (381)
T PF09506_consen 97 VSDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPTI-NLNSLFDLVPDDVERQQQLQQMMQEL 175 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCcc-chHHHHHHhcccHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999988777642 1111 0000
Q ss_pred --------eeec-CCCCcccCCCCC----------CCCCCCCEEEEEEeeee-------------CcEEeeeeeEEEccC
Q 020322 147 --------VCTS-VNECICHGIPDS----------RALEDGDTINIDVTVYL-------------NGYHGDTSATFFCGD 194 (327)
Q Consensus 147 --------v~~g-~n~~~~h~~p~~----------~~l~~Gd~v~vd~g~~~-------------~Gy~~d~~RT~~vG~ 194 (327)
-+-| .++...|..|+- +.-..||+=+.|+--.. +-|..+-+-++.+|+
T Consensus 176 M~~Ll~~A~~~GL~~SFFlH~aPNLGrd~~G~E~lk~A~~~d~GTTDiQfml~GaiKEaGlL~LlN~~i~~rtG~~PlG~ 255 (381)
T PF09506_consen 176 MNELLEKAEAQGLENSFFLHYAPNLGRDANGREILKPATAGDVGTTDIQFMLRGAIKEAGLLVLLNRYIAQRTGKAPLGE 255 (381)
T ss_pred HHHHHHHHHhCCcccceEEEeCCCCCCCCCcceeecccccCCCCchhhhhhhhhhhhhcchhHHHHHHHHhhcCCCCccC
Confidence 0112 355667777752 23345666666654332 345555555555554
Q ss_pred ------CCHHHHHHHHHHHHHHHHHHH
Q 020322 195 ------VDDEARNLVKVTKDCLHKAIS 215 (327)
Q Consensus 195 ------~~~~~~~~~~~~~~~~~~~i~ 215 (327)
.|.....+++.+.+....-.-
T Consensus 256 ~FNvR~AP~~h~~Ll~L~~~~i~~~~M 282 (381)
T PF09506_consen 256 DFNVRQAPKSHQELLDLCKENIPPEQM 282 (381)
T ss_pred ccccccCchhHHHHHHHHHhhCCHHHC
Confidence 566667777776666554443
No 81
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=40.20 E-value=73 Score=22.48 Aligned_cols=42 Identities=12% Similarity=0.323 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHh
Q 020322 195 VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 236 (327)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~ 236 (327)
.+.+|+.+.+.+.+.+..+++.++.|.+..=+...++.+++.
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~ 51 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALES 51 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999998776666666665554
No 82
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=38.37 E-value=1.1e+02 Score=28.72 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCcC
Q 020322 85 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS 136 (327)
Q Consensus 85 Ks~~EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~ 136 (327)
-|+.||+.+-++-......+......+-|..++.||...++..+.+.-+.|.
T Consensus 103 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT 154 (389)
T TIGR02399 103 VSKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT 154 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 4889999999999999999999999999999999999999999998877764
No 83
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=37.14 E-value=42 Score=22.48 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHh---h-hcCCC-CCHHHHHHHHH
Q 020322 92 CMRVSGRLAAQVLEYAG---T-LVKPG-ITTDEIDKAVH 125 (327)
Q Consensus 92 ~~r~A~~ia~~~~~~~~---~-~i~~G-~te~ei~~~~~ 125 (327)
.|.+|++|+.++++.-. + .++.| +|+.|++..+.
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~ 48 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLD 48 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTS
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcC
Confidence 47889999999886532 2 23456 78999888765
No 84
>PRK01490 tig trigger factor; Provisional
Probab=33.60 E-value=1.5e+02 Score=28.67 Aligned_cols=56 Identities=20% Similarity=0.364 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEEeeeeCcEEeee----eeEE
Q 020322 115 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDT----SATF 190 (327)
Q Consensus 115 ~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~----~RT~ 190 (327)
+|+.+|+..+.....+++-+. +.+++++.||.|.+|+.+..+|-.-+. ..+|
T Consensus 132 vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~~~ 187 (435)
T PRK01490 132 VTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDGEEFEGGKAEDFSL 187 (435)
T ss_pred CCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECCEECcCCCCCceEE
Confidence 788999999888777655431 223568999999999998877744322 2455
Q ss_pred EccC
Q 020322 191 FCGD 194 (327)
Q Consensus 191 ~vG~ 194 (327)
.+|.
T Consensus 188 ~lg~ 191 (435)
T PRK01490 188 ELGS 191 (435)
T ss_pred EEcC
Confidence 5553
No 85
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=30.89 E-value=95 Score=23.53 Aligned_cols=67 Identities=12% Similarity=0.143 Sum_probs=48.2
Q ss_pred EEEEeeeeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCC-------CchHHHhHHHHHHHHhCCCc
Q 020322 172 NIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPG-------MEYKKIGKTIQDHADRYNYG 240 (327)
Q Consensus 172 ~vd~g~~~~Gy~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG-------~~~~ei~~~~~~~~~~~G~~ 240 (327)
.+|+.....+|- .+++.+.+-+ ..+.++..+...+.....+..+--| ++-.+..+.+.+.+++.||-
T Consensus 24 V~DV~veHp~YG-~i~~~L~i~s-r~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~~G~L 97 (98)
T PF02829_consen 24 VLDVIVEHPVYG-EITGNLNISS-RRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKKKGFL 97 (98)
T ss_dssp EEEEEEEETTTE-EEEEEEEE-S-HHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHHTT-B
T ss_pred EEEEEEeCCCCc-EEEEEEecCC-HHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHHCCCc
Confidence 348888888887 9999999944 5666777777777777777777666 45677889999999999973
No 86
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=28.68 E-value=50 Score=23.90 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=28.3
Q ss_pred chHHHhHHHHHHHHhCCCceecceeeeecccccccCCccccc
Q 020322 222 EYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY 263 (327)
Q Consensus 222 ~~~ei~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~ 263 (327)
..+++-..+-+++++.||.++....|+-+- .++-+|..+
T Consensus 16 ~~~~iL~~Vy~AL~EKGYnPinQivGYllS---GDPaYItsh 54 (79)
T PF06135_consen 16 EIREILKQVYAALEEKGYNPINQIVGYLLS---GDPAYITSH 54 (79)
T ss_pred hHHHHHHHHHHHHHHcCCChHHHHHhheec---CCCccccCc
Confidence 456677778888999999988888888664 344556544
No 87
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=28.50 E-value=2.9e+02 Score=26.47 Aligned_cols=57 Identities=21% Similarity=0.408 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEEeeeeCcEEeeee----eEE
Q 020322 115 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTS----ATF 190 (327)
Q Consensus 115 ~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~vd~g~~~~Gy~~d~~----RT~ 190 (327)
+|+.+|+..+.....+++-+.. -.+++++.||.|.+|+.+..+|=..+.+ .+|
T Consensus 120 vtde~vd~~i~~l~~~~a~~~~-----------------------~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~~~ 176 (408)
T TIGR00115 120 VTDEDVDEELEKLREQNATLVP-----------------------VERRAAEKGDRVTIDFEGFIDGEAFEGGKAENFSL 176 (408)
T ss_pred CCHHHHHHHHHHHHHhCCcccc-----------------------ccccccCCCCEEEEEEEEEECCEECcCCCCCCeEE
Confidence 6899999999888877665310 0235688999999999887776544432 356
Q ss_pred EccC
Q 020322 191 FCGD 194 (327)
Q Consensus 191 ~vG~ 194 (327)
.+|.
T Consensus 177 ~lg~ 180 (408)
T TIGR00115 177 ELGS 180 (408)
T ss_pred EECC
Confidence 6664
No 88
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=27.68 E-value=99 Score=22.13 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=30.7
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEE
Q 020322 111 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 173 (327)
Q Consensus 111 i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~v 173 (327)
++.|.|-.|++..++..+.+.=.+- .-.| +.....+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~A-----------~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIEA-----------VGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEEE-----------EEcc-----CEEECCCEEecCCCEEEE
Confidence 4668899999999998776432221 1112 222345678999999987
No 89
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=24.64 E-value=60 Score=23.59 Aligned_cols=35 Identities=26% Similarity=0.331 Sum_probs=22.4
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC
Q 020322 99 LAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 133 (327)
Q Consensus 99 ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~ 133 (327)
|+.++...+.+..+.++|..||...+...+.+.|.
T Consensus 40 i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 40 IASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 44444444444444499999999999999997764
No 90
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=24.32 E-value=1.9e+02 Score=26.29 Aligned_cols=52 Identities=17% Similarity=0.176 Sum_probs=44.4
Q ss_pred eeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCch-HHHhHHHHHHHHhCCC
Q 020322 185 DTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEY-KKIGKTIQDHADRYNY 239 (327)
Q Consensus 185 d~~RT~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~-~ei~~~~~~~~~~~G~ 239 (327)
-.+|..++ ++++++..-....++.++.+++.-|... .+|-+++.+.+++.++
T Consensus 186 ~SSRN~YL---s~eeR~~A~~L~~~L~~~~~~~~~G~~~~~~i~~~~~~~L~~~~~ 238 (285)
T COG0414 186 LSSRNVYL---SAEERKAAPALYRALTAAAELAAGGERDPAKIIEAARQVLEEAGF 238 (285)
T ss_pred hhhccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCC
Confidence 45677766 7899999999999999999999999866 8999999999987666
No 91
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=24.32 E-value=56 Score=22.69 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=14.6
Q ss_pred HHhhhcCCCCCHHHHHHHH
Q 020322 106 YAGTLVKPGITTDEIDKAV 124 (327)
Q Consensus 106 ~~~~~i~~G~te~ei~~~~ 124 (327)
...+.|++|||..|+.+.+
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 4567899999999988775
No 92
>KOG2611 consensus Neurochondrin/leucine-rich protein (Neurochondrin) [Function unknown]
Probab=23.37 E-value=33 Score=33.71 Aligned_cols=69 Identities=17% Similarity=0.191 Sum_probs=46.3
Q ss_pred CCEEEEEEeeeeCcEEeeeeeEEEccC--------CCHHH--HHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHHHHHh
Q 020322 168 GDTINIDVTVYLNGYHGDTSATFFCGD--------VDDEA--RNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 236 (327)
Q Consensus 168 Gd~v~vd~g~~~~Gy~~d~~RT~~vG~--------~~~~~--~~~~~~~~~~~~~~i~~~kpG~~~~ei~~~~~~~~~~ 236 (327)
+|.-.+-+++.|.|||+|++.-|+.|= .-|.. -.+-...-+..-..+..+|||.--.++-.+.++++.+
T Consensus 584 nD~taLvvS~aYkG~WsDLsELWFLGMQt~~G~lPLvPWLs~~AL~S~W~e~ivk~L~kVk~~tl~~nv~sAYe~~L~q 662 (698)
T KOG2611|consen 584 NDPTALVVSIAYKGYWSDLSELWFLGMQTMCGVLPLVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDFLSQ 662 (698)
T ss_pred CCCceEEeehhhhhhhhhHHHHHHHhHHHHcCcccchhhhcHHHHhcccHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 577777899999999999999998872 11111 1122233445556677889998777777766666544
No 93
>PRK05473 hypothetical protein; Provisional
Probab=23.31 E-value=68 Score=23.60 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=26.9
Q ss_pred hHHHhHHHHHHHHhCCCceecceeeeecccccccCCccccc
Q 020322 223 YKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY 263 (327)
Q Consensus 223 ~~ei~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~ 263 (327)
.+++-..+.+++++.||.++....|+-+- .++-+|..+
T Consensus 20 v~eiL~~Vy~AL~EKGYNPinQiVGYllS---GDPaYItsh 57 (86)
T PRK05473 20 VREILTTVYDALEEKGYNPINQIVGYLLS---GDPAYIPRH 57 (86)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHhhhcc---CCCCccCCc
Confidence 45666677788899999988888888665 334456544
No 94
>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.
Probab=22.37 E-value=1.2e+02 Score=24.17 Aligned_cols=28 Identities=14% Similarity=0.159 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHH
Q 020322 98 RLAAQVLEYAGTLVKPGITTDEIDKAVH 125 (327)
Q Consensus 98 ~ia~~~~~~~~~~i~~G~te~ei~~~~~ 125 (327)
.+|...-..+.+.++.|.|+.||-..+.
T Consensus 57 ~iA~dmR~~Vr~~i~~G~Sd~eI~~~~v 84 (126)
T TIGR03147 57 PIAYDLRHEVYSMVNEGKSNQQIIDFMT 84 (126)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5778888899999999999998876543
No 95
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=21.77 E-value=1.9e+02 Score=28.28 Aligned_cols=44 Identities=23% Similarity=0.410 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCcCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEEeeeeCcE
Q 020322 115 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGY 182 (327)
Q Consensus 115 ~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~vd~g~~~~Gy 182 (327)
+|+.||+..+.....++.-+ .|.++.++.||.|.||+.+..+|=
T Consensus 132 v~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 132 VTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred cCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 57888888877766554432 122222889999999999877764
No 96
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=21.32 E-value=2.1e+02 Score=24.09 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=36.9
Q ss_pred CCCCCCCCCEEEEEEeee-eCcEEeeeee-----EEEccCCCHHHHHHHHHHHHHHHHHHHHhcCCCch
Q 020322 161 DSRALEDGDTINIDVTVY-LNGYHGDTSA-----TFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEY 223 (327)
Q Consensus 161 ~~~~l~~Gd~v~vd~g~~-~~Gy~~d~~R-----T~~vG~~~~~~~~~~~~~~~~~~~~i~~~kpG~~~ 223 (327)
+....+.||.|.+...+. .+|-.-|.++ +|.+|. ..+..+++.++..|++|-+.
T Consensus 82 ~g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~---------~~vi~Gl~e~L~~Mk~Ge~~ 141 (177)
T TIGR03516 82 EGTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQ---------QDLFSGLRDGLKLMKEGETA 141 (177)
T ss_pred CCCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCC---------cchhHHHHHHHcCCCCCCEE
Confidence 345578999999998776 5776655553 566654 13456677788888888543
No 97
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=20.94 E-value=1.2e+02 Score=21.24 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHH
Q 020322 89 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQ 126 (327)
Q Consensus 89 EI~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~ 126 (327)
=+.++|.|-.+.+.-|..+.+..---+|..||.+++.+
T Consensus 4 ILrkLRyal~l~d~~m~~if~l~~~~vs~~el~a~lrk 41 (68)
T PF07308_consen 4 ILRKLRYALDLKDDDMIEIFALAGFEVSKAELSAWLRK 41 (68)
T ss_pred HHHHHHHHHcCChHHHHHHHHHcCCccCHHHHHHHHCC
Confidence 36789999999999999999988888999999888765
No 98
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=20.43 E-value=1.8e+02 Score=18.27 Aligned_cols=42 Identities=10% Similarity=-0.013 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHHHHHHH-HHHHhhhcCCCCCHHHHHHHHHH
Q 020322 85 HDEKGIECMRVSGRLAAQV-LEYAGTLVKPGITTDEIDKAVHQ 126 (327)
Q Consensus 85 Ks~~EI~~~r~A~~ia~~~-~~~~~~~i~~G~te~ei~~~~~~ 126 (327)
=|++|-+.+.+|.+.-..- ...+...+.+|.|..++......
T Consensus 4 Wt~eE~~~l~~~v~~~g~~~W~~Ia~~~~~~Rt~~qc~~~~~~ 46 (48)
T PF00249_consen 4 WTEEEDEKLLEAVKKYGKDNWKKIAKRMPGGRTAKQCRSRYQN 46 (48)
T ss_dssp S-HHHHHHHHHHHHHSTTTHHHHHHHHHSSSSTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcHHHHHHHHcCCCCCHHHHHHHHHh
Confidence 3788989998888877766 67777766678888887766543
No 99
>PRK06646 DNA polymerase III subunit chi; Provisional
Probab=20.29 E-value=4.4e+02 Score=21.66 Aligned_cols=40 Identities=5% Similarity=-0.105 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHC
Q 020322 91 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN 131 (327)
Q Consensus 91 ~~~r~A~~ia~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~ 131 (327)
.+.+.+|+++++++..-.+.+--.-++ +....+.+.+-..
T Consensus 13 ~~~~~acrL~~Ka~~~G~rv~I~~~d~-~~~~~LD~~LWtf 52 (154)
T PRK06646 13 LLLKSILLLIEKCYYSDLKSVILTADA-DQQEMLNKNLWTY 52 (154)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEcCCH-HHHHHHHHHhcCC
Confidence 357889999999998866654444344 4667777777644
Done!