BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020327
(327 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O96623|ARPC2_DICDI Actin-related protein 2/3 complex subunit 2 OS=Dictyostelium
discoideum GN=arcB PE=1 SV=1
Length = 293
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 183/315 (58%), Gaps = 26/315 (8%)
Query: 1 MLLLQSHSRFLLEALLNRVQNVDKATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVSLPV 60
MLLL++H+R L + +++ + + + + +FD V+++VQ T + +++SVSL
Sbjct: 1 MLLLETHNRILYDEVISHFEGDRRVNNI---FADFDGVKFNVQ-TSDDKSSLMVSVSLHA 56
Query: 61 PPPETIFIGGLPFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKHALLV 120
L G +K+ YG+++Q P G+++TL + S NK L
Sbjct: 57 AADL------LKNGGSALLKSVYGDMLQA--KPEGGYDVTLVIQSS----FSGNKEELAK 104
Query: 121 KIASVREVVLGAPLRVVLKHLASKTVASDIDQLLALVHRPKESFFLIPQAEKVTVVFPMR 180
K++ ++ ++ AP +V + + +K + +++A+ +R E+F+L PQ + V V+F +
Sbjct: 105 KVSLLKRHLVAAPFLMVFEGIEAK---KPLPEIIAINYRTDETFYLKPQGDNVIVIFDIA 161
Query: 181 FNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWSS-SPPLELKGVPS-ETLSANAGFVT 238
F D+ D +L+ FLQ FV+ R+T ++N P +S PPLELKGV AN GFV+
Sbjct: 162 FKDADDVILSKIFLQSFVDVRKT--ISNVPSITFSQKDPPLELKGVKGVRAGQANHGFVS 219
Query: 239 FVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIRTLDRAKPD- 297
FV+FP H+ KK + + TF Y+ YH+KC++G+MHT MR RVES+I+ L+RAKP+
Sbjct: 220 FVLFPAHI--KKPQESADLIQTFRDYLHYHIKCAKGYMHTSMRNRVESLIQVLNRAKPEP 277
Query: 298 AEKLKKSTSNKSFKR 312
+K++ + K FK+
Sbjct: 278 VNTVKRTITGKFFKQ 292
>sp|O14241|ARPC2_SCHPO Actin-related protein 2/3 complex subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=arc2 PE=1 SV=1
Length = 317
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 171/327 (52%), Gaps = 26/327 (7%)
Query: 1 MLLLQSHSRFLLEALLNRVQNVDKATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVSLPV 60
ML L ++ F+ E L R + + + +D +FD V +H+ T + +L+S+S+
Sbjct: 1 MLSLDYNNIFIYELLTERFSS-ENPSSIDQVVTDFDGVTFHIS-TPEEKTKILISLSMKC 58
Query: 61 PPPETIFIGGLPFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKHALLV 120
P + +G ++ +K YG V P G+N ++ ++L +LP +E K L +
Sbjct: 59 YPE------LVNYGTLDLLKQIYGAYVH---EPEMGYNFSILIDLQQLPATDEEKEQLAM 109
Query: 121 KIASVREVVLGAPL------RVVLKHLASKT--------VASDIDQLLALVHRPKESFFL 166
I+ ++ VL AP + L LA K + +L+A+ +R +E+ L
Sbjct: 110 SISMLKRNVLAAPFHRAFTKQAELADLARKDPENAPMLDKQATSQELMAIHYRDEETIVL 169
Query: 167 IPQAEKVTVVFPMRFNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWS-SSPPLELKGV 225
P+ ++VTVVF +F + D + FLQEFV+ARR + AP ++S PPLE++ +
Sbjct: 170 WPEHDRVTVVFSTKFREETDRIFGKVFLQEFVDARRRPAIQTAPQVLFSYRDPPLEIRDI 229
Query: 226 PSETLSANAGFVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVE 285
+ GFVTFV+F RH + + + ++ F + +H+K S+ +MH RMR+RV
Sbjct: 230 QGIQKGDDFGFVTFVLFERHFTPQNREDCISHIQVFRNTLHFHIKASKAYMHQRMRKRVA 289
Query: 286 SMIRTLDRAKPDAEKLKKSTSNKSFKR 312
+ L+RAKPD E +K+ + +SF R
Sbjct: 290 DFQKVLNRAKPDVELERKTATGRSFVR 316
>sp|Q8WTM6|ARPC2_CAEEL Probable actin-related protein 2/3 complex subunit 2
OS=Caenorhabditis elegans GN=arx-4 PE=3 SV=1
Length = 301
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 168/315 (53%), Gaps = 20/315 (6%)
Query: 1 MLLLQSHSRFLLEALLNRVQNVDKATE---VDYHWVEFDDVRYHVQVTMKNPHIVLLSVS 57
M++L+ ++R ++E L + N + + V+ + +FD V Y + + ++LS+S
Sbjct: 1 MIILEQNNRIIVELLEQKFANAKEGGKPESVNVTFADFDGVLYKLSNPDGDRTKIILSIS 60
Query: 58 LPVPPPETIFIGGLPFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKHA 117
L + GA + ++ YG + P GFN+TL+ NL+ LP + +
Sbjct: 61 LK------FYTELQQHGADDLLRRVYGG--HMRSTPEQGFNVTLEYNLADLPADTTD--- 109
Query: 118 LLVKIASVREVVLGAPLRVVLKHLASKTVASDIDQLLALVHRPKESFFLIPQAEKVTVVF 177
LV+ AS + A V K+ + + + + +R E+ ++ +A++VTV+F
Sbjct: 110 -LVQAASALKRNCFAS--VFEKYFEFQEAGQEGHKRAVINYRDDETMYIEAKADRVTVIF 166
Query: 178 PMRFNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWS-SSPPLELKGVPSETLSANAGF 236
F D+ D ++ FLQEF E R+ + AP ++S PPLELK +P + N G+
Sbjct: 167 STVFKDADDVIIGKVFLQEFREGRKAS--QTAPAVLYSLGEPPLELKDLPEARVGDNVGY 224
Query: 237 VTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIRTLDRAKP 296
+TFV+FPRH K D T+ + +F Y+ YH+KCS+ ++HTRMR + ++ L+RA+P
Sbjct: 225 ITFVLFPRHTNKKTKDNTIDLIHSFRDYLHYHIKCSKVYLHTRMRAKTTDFLKVLNRARP 284
Query: 297 DAEKLKKSTSNKSFK 311
+ + KK+ ++F+
Sbjct: 285 EVKGEKKTFHGRTFQ 299
>sp|Q5R5Z5|ARPC2_PONAB Actin-related protein 2/3 complex subunit 2 OS=Pongo abelii
GN=ARPC2 PE=2 SV=1
Length = 300
Score = 154 bits (389), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 168/316 (53%), Gaps = 25/316 (7%)
Query: 1 MLLLQSHSRFLLEALLNRVQNV---DKATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVS 57
M+LL+ ++R + E L + +N +K V+ + +FD V YH+ + V++S+S
Sbjct: 1 MILLEVNNRIIEETLALKFENAAAGNKPEAVEVTFADFDGVLYHISNPNGDKTKVMVSIS 60
Query: 58 LPVPPPETIFIGGL-PFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKH 116
L F L GA E +K YG+ L P G+N++L +L LP + K
Sbjct: 61 LK-------FYKELQAHGADELLKRVYGS---FLVNPESGYNVSLLYDLENLPAS---KD 107
Query: 117 ALLVKIASVREVVLGAPLRVVLKHLASKTVASDIDQLLALVHRPKESFFLIPQAEKVTVV 176
+++ + ++ + V K+ + + + + +R E+ ++ + ++VTVV
Sbjct: 108 SIVHQAGMLKRNCFAS---VFEKYFQFQEEGKEGENRAVIHYRDDETMYVESKKDRVTVV 164
Query: 177 FPMRFNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWS-SSPPLELKGVPSETLSANAG 235
F F D D V+ F+QEF E RR + + AP ++S PPLELK + + N G
Sbjct: 165 FSTVFKDDDDVVIGKVFMQEFKEGRRAS--HTAPQVLFSHREPPLELKDTDA-AVGDNIG 221
Query: 236 FVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIRTLDRAK 295
++TFV+FPRH D T+ + TF Y+ YH+KCS+ ++HTRMR + ++ L+RA+
Sbjct: 222 YITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRAR 281
Query: 296 PDAEKLK-KSTSNKSF 310
PDAEK + K+ + K+F
Sbjct: 282 PDAEKKEMKTITGKTF 297
>sp|O15144|ARPC2_HUMAN Actin-related protein 2/3 complex subunit 2 OS=Homo sapiens
GN=ARPC2 PE=1 SV=1
Length = 300
Score = 154 bits (389), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 168/316 (53%), Gaps = 25/316 (7%)
Query: 1 MLLLQSHSRFLLEALLNRVQNV---DKATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVS 57
M+LL+ ++R + E L + +N +K V+ + +FD V YH+ + V++S+S
Sbjct: 1 MILLEVNNRIIEETLALKFENAAAGNKPEAVEVTFADFDGVLYHISNPNGDKTKVMVSIS 60
Query: 58 LPVPPPETIFIGGL-PFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKH 116
L F L GA E +K YG+ L P G+N++L +L LP + K
Sbjct: 61 LK-------FYKELQAHGADELLKRVYGS---FLVNPESGYNVSLLYDLENLPAS---KD 107
Query: 117 ALLVKIASVREVVLGAPLRVVLKHLASKTVASDIDQLLALVHRPKESFFLIPQAEKVTVV 176
+++ + ++ + V K+ + + + + +R E+ ++ + ++VTVV
Sbjct: 108 SIVHQAGMLKRNCFAS---VFEKYFQFQEEGKEGENRAVIHYRDDETMYVESKKDRVTVV 164
Query: 177 FPMRFNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWS-SSPPLELKGVPSETLSANAG 235
F F D D V+ F+QEF E RR + + AP ++S PPLELK + + N G
Sbjct: 165 FSTVFKDDDDVVIGKVFMQEFKEGRRAS--HTAPQVLFSHREPPLELKDTDA-AVGDNIG 221
Query: 236 FVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIRTLDRAK 295
++TFV+FPRH D T+ + TF Y+ YH+KCS+ ++HTRMR + ++ L+RA+
Sbjct: 222 YITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRAR 281
Query: 296 PDAEKLK-KSTSNKSF 310
PDAEK + K+ + K+F
Sbjct: 282 PDAEKKEMKTITGKTF 297
>sp|Q3MHR7|ARPC2_BOVIN Actin-related protein 2/3 complex subunit 2 OS=Bos taurus GN=ARPC2
PE=1 SV=1
Length = 300
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 168/316 (53%), Gaps = 25/316 (7%)
Query: 1 MLLLQSHSRFLLEALLNRVQNV---DKATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVS 57
M+LL+ ++R + E L + +N +K V+ + +FD V YH+ + V++S+S
Sbjct: 1 MILLEVNNRIIEETLALKFENAAAGNKPEAVEVTFADFDGVLYHISNPNGDKTKVMVSIS 60
Query: 58 LPVPPPETIFIGGL-PFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKH 116
L F L GA E +K YG+ L P G+N++L +L LP + K
Sbjct: 61 LK-------FYKELQAHGADELLKRVYGSY---LVNPESGYNVSLLYDLENLPAS---KD 107
Query: 117 ALLVKIASVREVVLGAPLRVVLKHLASKTVASDIDQLLALVHRPKESFFLIPQAEKVTVV 176
+++ + ++ + V K+ + + + + +R E+ ++ + ++VTVV
Sbjct: 108 SIVHQAGMLKRNCFAS---VFEKYFQFQEEGKEGENRAVIHYRDDETMYVESKKDRVTVV 164
Query: 177 FPMRFNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWS-SSPPLELKGVPSETLSANAG 235
F F D D V+ F+QEF E RR + + AP ++S PPLELK + + N G
Sbjct: 165 FSTVFKDDDDVVIGKVFMQEFKEGRRAS--HTAPQVLFSHREPPLELKDTDA-AVGDNIG 221
Query: 236 FVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIRTLDRAK 295
++TFV+FPRH D T+ + TF Y+ YH+KCS+ ++HTRMR + ++ L+RA+
Sbjct: 222 YITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRAR 281
Query: 296 PDAEKLK-KSTSNKSF 310
PDAEK + K+ + K+F
Sbjct: 282 PDAEKKEMKTITGKTF 297
>sp|P85970|ARPC2_RAT Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus
GN=Arpc2 PE=1 SV=1
Length = 300
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 168/316 (53%), Gaps = 25/316 (7%)
Query: 1 MLLLQSHSRFLLEALLNRVQNV---DKATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVS 57
M+LL+ ++R + E L + +N +K V+ + +FD V YH+ + V++S+S
Sbjct: 1 MILLEVNNRIIEETLALKFENAAAGNKPEAVEVTFADFDGVLYHISNPNGDKTKVMVSIS 60
Query: 58 LPVPPPETIFIGGL-PFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKH 116
L F L GA E +K YG+ L P G+N++L +L LP + K
Sbjct: 61 LK-------FYKELQAHGADELLKRVYGS---FLVNPESGYNVSLLYDLENLPAS---KD 107
Query: 117 ALLVKIASVREVVLGAPLRVVLKHLASKTVASDIDQLLALVHRPKESFFLIPQAEKVTVV 176
+++ + ++ + V K+ + + + + +R E+ ++ + ++VTVV
Sbjct: 108 SIVHQAGMLKRNCFAS---VFEKYFQFQEEGKEGENRAVIHYRDDETMYVESKKDRVTVV 164
Query: 177 FPMRFNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWS-SSPPLELKGVPSETLSANAG 235
F F D D V+ F+QEF E RR + + AP ++S PPLELK + + N G
Sbjct: 165 FSTVFKDDDDVVIGKVFMQEFKEGRRAS--HTAPQVLFSHREPPLELKDTDA-AVGDNIG 221
Query: 236 FVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIRTLDRAK 295
++TFV+FPRH D T+ + TF Y+ YH+KCS+ ++HTRMR + ++ L+RA+
Sbjct: 222 YITFVLFPRHTNATARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRAR 281
Query: 296 PDAEKLK-KSTSNKSF 310
PDAEK + K+ + K+F
Sbjct: 282 PDAEKKEMKTITRKTF 297
>sp|Q9CVB6|ARPC2_MOUSE Actin-related protein 2/3 complex subunit 2 OS=Mus musculus
GN=Arpc2 PE=1 SV=3
Length = 300
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 168/316 (53%), Gaps = 25/316 (7%)
Query: 1 MLLLQSHSRFLLEALLNRVQNV---DKATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVS 57
M+LL+ ++R + E L + +N +K V+ + +FD V YH+ + V++S+S
Sbjct: 1 MILLEVNNRIIEETLALKFENAAAGNKPEAVEVTFADFDGVLYHISNPNGDKTKVMVSIS 60
Query: 58 LPVPPPETIFIGGL-PFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKH 116
L F L GA E +K YG+ L P G+N++L +L LP + K
Sbjct: 61 LK-------FYKELQAHGADELLKRVYGS---FLVNPEPGYNVSLLYDLENLPAS---KD 107
Query: 117 ALLVKIASVREVVLGAPLRVVLKHLASKTVASDIDQLLALVHRPKESFFLIPQAEKVTVV 176
+++ + ++ + V K+ + + + + +R E+ ++ + ++VTVV
Sbjct: 108 SIVHQAGMLKRNCFAS---VFEKYFQFQEEGKEGENRAVIHYRDDETMYVESKKDRVTVV 164
Query: 177 FPMRFNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWS-SSPPLELKGVPSETLSANAG 235
F F D D V+ F+QEF E RR + + AP ++S PPLELK + + N G
Sbjct: 165 FSTVFKDDDDVVIGKVFMQEFKEGRRAS--HTAPQVLFSHREPPLELKDTDA-AVGDNIG 221
Query: 236 FVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIRTLDRAK 295
++TFV+FPRH D T+ + TF Y+ YH+KCS+ ++HTRMR + ++ L+RA+
Sbjct: 222 YITFVLFPRHTNATARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRAR 281
Query: 296 PDAEKLK-KSTSNKSF 310
PDAEK + K+ + K+F
Sbjct: 282 PDAEKKEMKTITGKTF 297
>sp|Q9VIM5|ARPC2_DROME Probable actin-related protein 2/3 complex subunit 2 OS=Drosophila
melanogaster GN=Arc-p34 PE=2 SV=2
Length = 301
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 167/320 (52%), Gaps = 25/320 (7%)
Query: 1 MLLLQSHSRFLLEALLNRVQNVD---KATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVS 57
M+LL+ ++R + E LL + +N K +D +FD V YH+ + V +S+S
Sbjct: 1 MILLEINNRIIEETLLVKYRNAQAGLKPESIDIRIADFDGVLYHISNVNGDKTKVRISIS 60
Query: 58 LPVPPPETIFIGGL-PFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKH 116
L F L GA E +K YG+ +L +G+N+++ +NL ++P E+
Sbjct: 61 LK-------FYKQLQEHGADELLKREYGS---LLTDTEEGYNVSVLINLEEIP---EDCE 107
Query: 117 ALLVKIASVREVVLGAPLRVVLKHLASKTVASDIDQLLALVHRPKESFFLIPQAEKVTVV 176
+ +I ++ + V K+ + + + + +R E+ ++ + ++VTVV
Sbjct: 108 QIAKRIGLLKRNCFAS---VFEKYFDYQEQGEEGQKRAVINYRNDETLYVEAKPDRVTVV 164
Query: 177 FPMRFNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWS-SSPPLELKGVPSETLSANAG 235
F F D D ++ F+QE E RR + + AP ++S PPLEL + + N G
Sbjct: 165 FSTIFRDEDDVIIGKVFMQELREGRRAS--HTAPQVLFSHREPPLELANTDAR-VGDNIG 221
Query: 236 FVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIRTLDRAK 295
+VTFV+FPRH + D T+ + F Y+ YH+KCS+ ++H+RMR + ++ L+RA+
Sbjct: 222 YVTFVLFPRHTNKETRDNTINLIHMFRDYLHYHIKCSKAYIHSRMRAKTSDFLKVLNRAR 281
Query: 296 PDAEKLKKST-SNKSFKRLS 314
P+ + +K T + ++FKR+
Sbjct: 282 PEPKNTEKKTITGRTFKRID 301
>sp|P53731|ARPC2_YEAST Actin-related protein 2/3 complex subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ARC35 PE=1
SV=1
Length = 342
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 163/323 (50%), Gaps = 30/323 (9%)
Query: 1 MLLLQSHSRFLLEALLNRVQNVDKAT--EVDYHWVEFDDVRYHVQVTMKNPHIVLLSVSL 58
ML LQ + + + L ++ + K + +D +FD YH+ T ++ I+LLSV
Sbjct: 1 MLHLQPQNLLIQKTLNEAIEALRKGSPLTMDRIVSDFDYTTYHISNTAEDKSILLLSVKT 60
Query: 59 P--VPPPETIFIGGLPFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKH 116
V E G L A + V I G++ TL++ L++L
Sbjct: 61 KAWVSVSECQLDGSLTLLKFLADHYSSLGGVTIPSEVEPGYDYTLQITLAELVQES---- 116
Query: 117 ALLVKIASVREVVLGAPLRVVLK---------------HLASKTVASDIDQ-LLALVHRP 160
+++++ ++ ++L P + + + VA++ D L + +R
Sbjct: 117 --ILQLSVLKTIILSFPFELAISKFIELSQQQPAPVEAEITGGEVAANGDNTLFTIKYRD 174
Query: 161 KESFFLIPQAEKVTVVFPMRFNDSIDTVLATSFLQEFVEAR-RTAGLNNAPLCMWSSSPP 219
+E+ F+ P ++VT++F F D D + FLQEFV+AR R + +AP ++S PP
Sbjct: 175 EENIFIKPSNDRVTIIFETIFQDETDKIFGKVFLQEFVDARKRNRQIQSAPQVLYSHEPP 234
Query: 220 LELKGV--PSETLSANAGFVTFVIFPRHVEGKKLD-RTVWNLSTFHAYVSYHVKCSEGFM 276
LELK + P + + F+TFV+FPRH + K+L ++ L+ F Y YH+KCS+ +M
Sbjct: 235 LELKRLYQPPKVAEQSRRFITFVLFPRHFQTKELQFHSICQLTLFRNYFHYHIKCSKAYM 294
Query: 277 HTRMRRRVESMIRTLDRAKPDAE 299
H+RMR RV+S I+ L+RAK D +
Sbjct: 295 HSRMRFRVDSFIKVLNRAKVDED 317
>sp|Q7PVX8|ARPC2_ANOGA Probable actin-related protein 2/3 complex subunit 2 OS=Anopheles
gambiae GN=Arc-p34 PE=3 SV=2
Length = 304
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 162/318 (50%), Gaps = 22/318 (6%)
Query: 1 MLLLQSHSRFLLEALLNRVQNV---DKATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVS 57
M+LL+ ++R + E L + +N +KA +D +FD V +H+ + V S+S
Sbjct: 1 MILLEINNRIVEETLTVKFKNAIAGNKAESIDVTVADFDGVLFHISNINGDKTKVRTSIS 60
Query: 58 LPVPPPETIFIGGL-PFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLPPNEENKH 116
L F L GA E +K YG+ +L P DG+N+++ ++L +P EN
Sbjct: 61 LK-------FYKQLQEHGADELLKREYGD---LLVAPEDGYNVSVLVDLENIP---ENWE 107
Query: 117 ALLVKIASVREVVLGAPLRVVLKHLASKTVASDIDQLLALVHRPKESFFLIPQAEKVTVV 176
+ KI ++ + + + + + +R E+ ++ + ++VTVV
Sbjct: 108 ETVRKIGLLKRNCFASVFEKYFDFQSQGEGEGEGQKRAVINYRNDETMYVEAKPDRVTVV 167
Query: 177 FPMRFNDSIDTVLATSFLQEFVEARRTAGLNNAPLCMWS-SSPPLELKGVPSETLSANAG 235
F F D D VL F+QE E RR + + AP ++S PPLEL + + N G
Sbjct: 168 FSTIFRDEDDVVLGKVFMQELREGRRAS--HTAPQVLFSHREPPLELANTGAR-VGENIG 224
Query: 236 FVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESMIRTLDRAK 295
+VTFV+FPRH + D T+ + F Y+ YH+KCS+ ++H+RMR + ++ L+RA+
Sbjct: 225 YVTFVLFPRHTAKETRDNTINLIHMFRDYLHYHIKCSKAYIHSRMRAKTTEFLKVLNRAR 284
Query: 296 PDAE-KLKKSTSNKSFKR 312
P+ + KK+ + ++F R
Sbjct: 285 PEPKITEKKTITGRTFIR 302
>sp|P53707|CSP37_CANAX 37 kDa cell surface protein OS=Candida albicans GN=CSP37 PE=1 SV=2
Length = 321
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 9/159 (5%)
Query: 172 KVTVVFPMRFNDSIDTV--LATSFLQEFVEARRTAGLNNAPLCMWSSSPPLELKGVPSET 229
K +F F+ S + V L ++ EA+ A + W+S EL +E
Sbjct: 143 KEKSIFGNWFDKSDNKVDQLKNDADKKINEAKDKAESTKSDFFNWNSKKADELDKKANEA 202
Query: 230 LSANAGFVTFVI--FPRHVEGKKLDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESM 287
++ + + + +H E K D WN + +S S+ ++ R +
Sbjct: 203 INWTNKQIDYASAEWHKHYEQAKGD---WNKALDD--LSKQWNDSKKQLNGRFDTEKDRA 257
Query: 288 IRTLDRAKPDAEKLKKSTSNKSFKRLSLKDLKDHRSNSM 326
I+ ++ AK + EKL +N + K LKD +DH S+
Sbjct: 258 IKGVEDAKSNFEKLSNDLANDASKNQKLKDAQDHFGKSL 296
>sp|B8GC73|RUVX_CHLAD Putative Holliday junction resolvase OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=Cagg_0094 PE=3 SV=1
Length = 142
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 117 ALLVKIASVREVVLGAPLRVVLKHL-ASKTVASDIDQLLALVHRPKESF------FLIPQ 169
A LV VR VV+G PL + +H + + +D L A+++ P E F Q
Sbjct: 47 ARLVAERGVRRVVVGLPLTMRGEHGPQAAAIQRFVDALAAVLNCPVEMFDERLTSVAAEQ 106
Query: 170 AEKVTVVFPMRFNDSIDTVLATSFLQEFVEARR 202
+ V P + + ID V A+ LQ++++ARR
Sbjct: 107 MLRNLGVKPAKIKEQIDQVAASIILQDYLDARR 139
>sp|O04533|LRK52_ARATH Putative L-type lectin-domain containing receptor kinase V.2
OS=Arabidopsis thaliana GN=LECRK52 PE=3 SV=1
Length = 656
Score = 34.7 bits (78), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 25/136 (18%)
Query: 17 NRVQNVDKATEVDYH-WVEFDDVRYHVQVTMKN-----PHIVLLSVSLPVPPP--ETIFI 68
R+ N+D A+ W+E+++ + VTM + P I LLS+ + P E ++I
Sbjct: 169 GRLVNLDIASGKPIQVWIEYNNSTKQLDVTMHSIKISKPKIPLLSMRKDLSPYLHEYMYI 228
Query: 69 G----GLPFGAIEAIKAAYGNVVQILDPPRDGFNLTLKLNLSKLP--PNEENKHALLVKI 122
G G P + + ++ N + D +NLS+LP P+E+ + +L KI
Sbjct: 229 GFTSVGSPTSSHYILGWSFNNKGAVSD-----------INLSRLPKVPDEDQERSLSSKI 277
Query: 123 ASVREVVLGAPLRVVL 138
++ + G L +VL
Sbjct: 278 LAISLSISGVTLVIVL 293
>sp|O82355|LEA2R_ARATH Desiccation-related protein At2g46140 OS=Arabidopsis thaliana
GN=At2g46140 PE=1 SV=1
Length = 166
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 3 LLQSHSRFLLEALLNRVQNVDKATEVDYHWVEFDDVRYHVQVTMKNPHIVLLSVSLPV 60
LL F E L N +VD+ V D V YH +V++KNP+ S S+P+
Sbjct: 19 LLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPY----SQSIPI 72
>sp|P96403|Y221_MYCTU Putative diacyglycerol O-acyltransferase Rv0221/MT0231
OS=Mycobacterium tuberculosis GN=Rv0221 PE=2 SV=2
Length = 469
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 30/117 (25%)
Query: 94 RDGFNLTLKLNLSKLP-PNEENK--HALLVKIASVREVVLGAPLRVVLKHLASKTVASDI 150
RDG N L LN+S +P P E + AL+ +I SV + G+ L + TV S +
Sbjct: 367 RDGQNKVLNLNISNVPGPRERGRVGAALVTEIYSVGPLTAGSGLNI--------TVWSYV 418
Query: 151 DQLLALVHRPKESFFLIPQAEKVTVVFPMRFNDSIDTVLATSFLQEFVEARRTAGLN 207
DQL V + TV P + + +F+E RR AGL+
Sbjct: 419 DQLNISV-----------LTDGSTVQDPHE--------VTAGMIADFIEIRRAAGLS 456
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,056,829
Number of Sequences: 539616
Number of extensions: 4650455
Number of successful extensions: 10895
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 10847
Number of HSP's gapped (non-prelim): 17
length of query: 327
length of database: 191,569,459
effective HSP length: 118
effective length of query: 209
effective length of database: 127,894,771
effective search space: 26730007139
effective search space used: 26730007139
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)