Query 020328
Match_columns 327
No_of_seqs 62 out of 64
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 15:14:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020328.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020328hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ba2_A D12_ORF131, hypothetica 93.7 0.12 4.2E-06 41.4 5.8 77 120-208 8-84 (85)
2 2no2_A HIP-I, huntingtin-inter 93.0 1.1 3.8E-05 36.6 10.7 80 131-210 11-97 (107)
3 1m1j_B Fibrinogen beta chain; 89.7 2.3 7.8E-05 42.7 11.2 97 115-211 87-191 (464)
4 3mq9_A Bone marrow stromal ant 88.0 6 0.0002 37.7 12.4 78 125-203 356-433 (471)
5 3oja_A Leucine-rich immune mol 87.9 3.1 0.00011 39.8 10.4 66 158-223 412-477 (487)
6 3g67_A Methyl-accepting chemot 87.7 4.8 0.00016 36.1 10.8 39 126-164 5-43 (213)
7 3g67_A Methyl-accepting chemot 87.5 7.6 0.00026 34.8 12.1 61 133-193 5-65 (213)
8 3tnu_B Keratin, type II cytosk 86.8 1.5 5E-05 36.2 6.5 40 169-208 31-70 (129)
9 1deq_A Fibrinogen (alpha chain 86.7 4.7 0.00016 39.8 10.9 95 115-209 54-155 (390)
10 3ghg_A Fibrinogen alpha chain; 85.5 7.9 0.00027 39.8 12.2 96 116-211 52-154 (562)
11 3tnu_A Keratin, type I cytoske 85.5 1.5 5.1E-05 36.3 5.9 64 141-207 30-96 (131)
12 3trt_A Vimentin; cytoskeleton, 84.6 6.9 0.00024 29.2 8.7 70 125-194 6-76 (77)
13 3na7_A HP0958; flagellar bioge 84.4 4.9 0.00017 36.2 9.3 57 155-211 62-120 (256)
14 3okq_A BUD site selection prot 83.6 14 0.00048 31.9 11.2 77 143-219 11-107 (141)
15 2akf_A Coronin-1A; coiled coil 82.7 1.3 4.4E-05 29.4 3.4 29 183-211 1-29 (32)
16 4dnd_A Syntaxin-10, SYN10; str 82.6 3.1 0.00011 34.9 6.7 59 122-182 68-127 (130)
17 2qyw_A Vesicle transport throu 82.6 2.4 8.3E-05 33.9 5.8 60 118-180 16-76 (102)
18 3onj_A T-snare VTI1; helix, HA 82.2 3.8 0.00013 32.4 6.8 53 124-179 8-60 (97)
19 3oja_B Anopheles plasmodium-re 80.6 12 0.00041 36.3 11.0 37 123-159 458-494 (597)
20 2yo3_A General control protein 80.5 2.9 9.8E-05 39.5 6.3 58 137-194 200-257 (268)
21 1c1g_A Tropomyosin; contractIl 80.3 23 0.0008 29.1 13.7 34 174-207 69-102 (284)
22 3oja_B Anopheles plasmodium-re 79.8 32 0.0011 33.3 13.7 24 137-160 465-488 (597)
23 1vcs_A Vesicle transport throu 79.7 1.9 6.3E-05 34.5 4.1 60 118-180 6-65 (102)
24 4abx_A DNA repair protein RECN 78.9 5.9 0.0002 33.7 7.3 45 115-159 68-118 (175)
25 3zx6_A HAMP, methyl-accepting 78.5 42 0.0015 31.1 13.8 9 61-69 11-19 (341)
26 3a7p_A Autophagy protein 16; c 77.9 25 0.00084 30.7 10.9 70 129-213 59-129 (152)
27 1deq_A Fibrinogen (alpha chain 77.5 15 0.00053 36.2 10.6 82 140-221 54-139 (390)
28 2jee_A YIIU; FTSZ, septum, coi 77.3 17 0.00057 28.8 8.8 69 154-222 7-75 (81)
29 1kmi_Z CHEZ, chemotaxis protei 77.2 15 0.0005 33.1 9.7 115 124-238 26-169 (214)
30 3zx6_A HAMP, methyl-accepting 76.6 48 0.0016 30.7 13.7 12 64-75 7-18 (341)
31 3gwk_C SAG1039, putative uncha 76.6 21 0.00072 26.6 10.4 70 136-205 12-93 (98)
32 1m1j_A Fibrinogen alpha subuni 76.6 21 0.00071 36.2 11.4 103 111-213 48-157 (491)
33 3hnw_A Uncharacterized protein 76.4 22 0.00075 30.0 10.0 64 150-213 72-135 (138)
34 3u59_A Tropomyosin beta chain; 75.7 28 0.00094 27.5 11.6 86 144-229 14-99 (101)
35 2xzr_A Immunoglobulin-binding 74.9 30 0.001 28.6 10.1 70 126-195 32-104 (114)
36 1gl2_D Syntaxin 8, vesicle tra 74.8 7.6 0.00026 28.2 6.0 50 154-217 10-59 (65)
37 1m1j_B Fibrinogen beta chain; 73.6 30 0.001 34.7 11.8 44 141-184 88-131 (464)
38 3ghg_A Fibrinogen alpha chain; 73.5 19 0.00066 37.0 10.4 76 139-214 50-129 (562)
39 3mq9_A Bone marrow stromal ant 73.0 31 0.0011 32.7 11.3 42 124-165 369-416 (471)
40 1fxk_C Protein (prefoldin); ar 72.3 6 0.0002 32.0 5.4 56 99-185 72-127 (133)
41 1m1j_C Fibrinogen gamma chain; 72.0 29 0.00098 34.2 11.1 40 168-207 85-124 (409)
42 3u59_A Tropomyosin beta chain; 71.7 35 0.0012 26.9 10.1 67 135-201 33-99 (101)
43 2nps_D Syntaxin-6; vesicle fus 71.7 13 0.00046 28.3 6.9 40 184-223 36-75 (82)
44 2w83_C C-JUN-amino-terminal ki 71.7 21 0.00071 28.1 8.0 65 124-209 5-72 (77)
45 1ic2_A Tropomyosin alpha chain 71.7 23 0.00079 26.9 8.3 59 150-208 17-75 (81)
46 1n7s_D SNAP-25A; neuronal snar 71.5 21 0.00072 25.9 7.7 53 153-219 10-62 (66)
47 3c9i_A Tail needle protein GP2 70.9 11 0.00039 34.7 7.3 59 152-210 83-141 (242)
48 3htk_A Structural maintenance 70.7 12 0.00042 26.5 6.2 47 157-203 9-55 (60)
49 3m0a_A TNF receptor-associated 70.1 21 0.00072 25.9 7.4 58 151-208 3-60 (66)
50 1ic2_A Tropomyosin alpha chain 70.1 33 0.0011 26.0 9.1 65 151-215 4-68 (81)
51 1sfc_D Protein (SNAP-25B), pro 69.7 20 0.00068 27.7 7.6 46 176-221 38-83 (87)
52 3u1c_A Tropomyosin alpha-1 cha 69.2 41 0.0014 26.7 10.3 81 147-227 17-97 (101)
53 1l8d_A DNA double-strand break 69.0 39 0.0013 26.3 9.9 36 129-164 4-42 (112)
54 4ioe_A Secreted protein ESXB; 68.0 33 0.0011 25.1 8.8 31 129-159 13-43 (93)
55 1sfc_D Protein (SNAP-25B), pro 67.6 28 0.00095 26.9 8.0 59 150-208 26-84 (87)
56 2nps_D Syntaxin-6; vesicle fus 67.4 11 0.00039 28.7 5.7 58 152-209 18-75 (82)
57 2zdi_C Prefoldin subunit alpha 65.8 8.7 0.0003 32.0 5.2 57 99-186 82-138 (151)
58 4ioe_A Secreted protein ESXB; 65.7 37 0.0013 24.8 9.9 31 135-165 12-42 (93)
59 2l5g_B Putative uncharacterize 64.7 4.4 0.00015 28.7 2.6 23 147-169 3-25 (42)
60 1gl2_D Syntaxin 8, vesicle tra 64.3 15 0.0005 26.7 5.5 48 134-185 8-55 (65)
61 1jth_B Syntaxin 1A; coiled-coi 63.4 38 0.0013 25.3 7.9 58 173-230 9-70 (77)
62 3zbh_A ESXA; unknown function, 62.8 42 0.0015 24.5 10.8 30 136-165 13-42 (99)
63 3swy_A Cyclic nucleotide-gated 62.4 13 0.00046 26.4 4.8 36 126-161 10-45 (46)
64 3o0z_A RHO-associated protein 62.0 83 0.0028 27.8 10.8 78 124-208 58-138 (168)
65 3hd7_B Syntaxin-1A; membrane p 61.7 14 0.00048 29.6 5.5 66 167-232 7-83 (109)
66 3ghg_C Fibrinogen gamma chain; 61.5 57 0.0019 32.3 10.8 90 116-205 26-122 (411)
67 2nps_B Syntaxin 13, vesicle-as 60.7 36 0.0012 25.1 7.3 54 174-227 6-63 (71)
68 3htk_A Structural maintenance 60.0 31 0.0011 24.3 6.5 47 136-182 9-55 (60)
69 3na7_A HP0958; flagellar bioge 60.0 96 0.0033 27.7 12.5 38 153-190 104-141 (256)
70 3swf_A CGMP-gated cation chann 58.8 24 0.00082 27.5 6.1 39 126-164 12-50 (74)
71 3zbh_A ESXA; unknown function, 58.5 51 0.0017 24.1 9.9 76 129-204 13-93 (99)
72 2dfs_A Myosin-5A; myosin-V, in 58.2 58 0.002 35.5 11.1 19 152-170 983-1001(1080)
73 3kkj_A Amine oxidase, flavin-c 57.5 2.2 7.5E-05 33.1 0.0 14 9-22 5-18 (336)
74 3efg_A Protein SLYX homolog; x 57.0 15 0.00052 28.3 4.7 54 149-209 10-63 (78)
75 3ghg_C Fibrinogen gamma chain; 56.9 1.2E+02 0.004 30.1 12.1 92 139-230 24-133 (411)
76 2vs0_A Virulence factor ESXA; 56.8 54 0.0019 23.9 8.1 29 136-164 10-38 (97)
77 3u1c_A Tropomyosin alpha-1 cha 55.8 74 0.0025 25.2 11.5 52 149-200 47-98 (101)
78 4i0x_B ESAT-6-like protein MAB 55.0 68 0.0023 24.5 8.6 34 135-168 14-47 (103)
79 3cvf_A Homer-3, homer protein 55.0 46 0.0016 26.1 7.2 59 129-208 7-65 (79)
80 3gwk_C SAG1039, putative uncha 55.0 62 0.0021 24.0 9.4 7 162-168 64-70 (98)
81 1m1j_A Fibrinogen alpha subuni 54.9 55 0.0019 33.3 9.4 49 143-191 108-156 (491)
82 2v71_A Nuclear distribution pr 54.5 1.2E+02 0.0041 27.1 13.1 84 137-220 47-134 (189)
83 1wle_A Seryl-tRNA synthetase; 54.4 43 0.0015 33.6 8.7 28 144-174 75-102 (501)
84 3ci9_A Heat shock factor-bindi 54.3 23 0.00077 25.4 4.9 41 125-165 3-43 (48)
85 1n7s_D SNAP-25A; neuronal snar 53.8 60 0.002 23.4 7.4 47 134-184 9-55 (66)
86 2b9c_A Striated-muscle alpha t 53.1 70 0.0024 27.2 8.7 67 153-219 52-118 (147)
87 2jee_A YIIU; FTSZ, septum, coi 52.9 79 0.0027 24.9 8.2 53 154-206 28-80 (81)
88 1sfc_B Protein (syntaxin 1A), 52.5 74 0.0025 24.1 8.3 55 172-226 19-77 (83)
89 2xdj_A Uncharacterized protein 52.5 56 0.0019 25.5 7.3 26 171-196 31-56 (83)
90 3gp4_A Transcriptional regulat 52.1 75 0.0026 26.1 8.6 30 181-210 88-117 (142)
91 1m1j_C Fibrinogen gamma chain; 52.0 1.8E+02 0.0063 28.5 12.6 49 182-230 85-133 (409)
92 4dnd_A Syntaxin-10, SYN10; str 51.9 1E+02 0.0035 25.6 10.2 96 107-209 17-126 (130)
93 3v86_A De novo design helix; c 51.8 8.3 0.00028 24.6 2.0 23 171-193 4-26 (27)
94 3zcc_A HAMP, osmolarity sensor 51.7 62 0.0021 23.0 8.0 23 166-188 65-87 (114)
95 3cve_A Homer protein homolog 1 51.7 66 0.0023 24.8 7.5 45 150-194 18-62 (72)
96 3s84_A Apolipoprotein A-IV; fo 51.2 75 0.0026 29.3 9.2 26 166-191 208-233 (273)
97 4fla_A Regulation of nuclear P 49.6 1E+02 0.0035 26.3 9.2 70 137-206 70-146 (152)
98 3fx7_A Putative uncharacterize 48.6 1.1E+02 0.0036 24.8 9.1 73 130-202 11-84 (94)
99 1qu7_A Methyl-accepting chemot 48.6 1.4E+02 0.0049 26.3 12.2 15 61-75 71-85 (227)
100 3cvf_A Homer-3, homer protein 48.4 76 0.0026 24.8 7.5 52 123-174 22-73 (79)
101 3fav_A ESAT-6-like protein ESX 47.7 72 0.0025 23.9 7.2 26 137-162 12-37 (101)
102 3fav_B ESAT-6, 6 kDa early sec 47.7 53 0.0018 24.1 6.4 28 137-164 10-37 (94)
103 3a7p_A Autophagy protein 16; c 47.2 1.2E+02 0.0042 26.3 9.3 23 189-211 97-119 (152)
104 3m0d_C TNF receptor-associated 47.1 71 0.0024 23.5 6.9 36 173-208 26-61 (65)
105 3b5n_D Protein transport prote 47.0 72 0.0025 23.5 6.9 32 185-216 28-59 (64)
106 2v66_B Nuclear distribution pr 47.0 1.2E+02 0.0041 25.0 9.5 69 124-196 6-74 (111)
107 4h22_A Leucine-rich repeat fli 46.9 72 0.0025 26.2 7.4 59 147-205 24-82 (103)
108 1ses_A Seryl-tRNA synthetase; 46.2 61 0.0021 31.5 8.2 65 144-221 33-97 (421)
109 3nmd_A CGMP dependent protein 46.1 53 0.0018 25.4 6.2 50 130-180 15-67 (72)
110 2zqm_A Prefoldin beta subunit 45.7 36 0.0012 26.4 5.4 15 61-75 25-39 (117)
111 1i84_S Smooth muscle myosin he 45.1 39 0.0013 36.8 7.2 24 24-47 652-675 (1184)
112 1l4a_D S-SNAP25 fusion protein 45.1 65 0.0022 25.0 6.7 38 184-221 47-84 (87)
113 3ol1_A Vimentin; structural ge 44.9 1.2E+02 0.0042 24.5 10.9 72 142-213 30-101 (119)
114 1n7s_B Syntaxin 1A; neuronal s 44.9 87 0.003 22.8 7.4 50 173-222 11-64 (68)
115 2dq0_A Seryl-tRNA synthetase; 44.5 65 0.0022 31.7 8.1 63 144-210 36-98 (455)
116 3hd7_A Vesicle-associated memb 44.2 1.1E+02 0.0038 23.7 9.3 22 137-158 7-28 (91)
117 1l4a_D S-SNAP25 fusion protein 44.0 54 0.0019 25.4 6.1 59 148-206 25-83 (87)
118 1q08_A Zn(II)-responsive regul 43.9 47 0.0016 24.9 5.6 61 150-210 7-75 (99)
119 3mts_A Histone-lysine N-methyl 43.9 17 0.00057 26.8 2.9 42 105-147 17-58 (64)
120 1x79_B RAB GTPase binding effe 43.4 1.4E+02 0.0048 24.7 8.7 65 136-200 7-71 (112)
121 2c5k_T Syntaxin TLG1, T-snare 43.2 65 0.0022 25.4 6.5 25 186-210 66-90 (95)
122 1i84_S Smooth muscle myosin he 42.6 75 0.0026 34.6 8.9 7 16-22 585-591 (1184)
123 3plt_A Sphingolipid long chain 42.5 2.1E+02 0.0071 26.4 11.6 84 127-214 61-150 (234)
124 3vkg_A Dynein heavy chain, cyt 42.4 95 0.0032 38.1 10.3 32 158-189 2019-2050(3245)
125 3qne_A Seryl-tRNA synthetase, 42.1 42 0.0014 33.7 6.4 63 144-210 38-100 (485)
126 2c5k_T Syntaxin TLG1, T-snare 42.0 46 0.0016 26.4 5.5 53 122-181 37-89 (95)
127 2nrj_A HBL B protein; enteroto 41.7 1.6E+02 0.0055 27.8 10.1 35 147-181 117-151 (346)
128 2q6q_A Spindle POLE BODY compo 41.3 98 0.0033 24.0 6.9 56 148-203 5-60 (74)
129 3oja_A Leucine-rich immune mol 41.3 34 0.0012 32.6 5.4 37 172-208 433-469 (487)
130 1jcd_A Major outer membrane li 41.1 54 0.0019 23.7 5.2 10 175-184 26-35 (52)
131 2v66_B Nuclear distribution pr 41.0 1.5E+02 0.0052 24.4 10.9 74 148-221 5-82 (111)
132 1gl2_B Syntaxin 7; membrane pr 40.9 65 0.0022 23.4 5.8 43 174-216 9-51 (65)
133 1t3j_A Mitofusin 1; coiled coi 40.7 96 0.0033 25.1 7.2 20 146-165 47-66 (96)
134 2xdj_A Uncharacterized protein 40.6 87 0.003 24.4 6.8 36 177-212 23-58 (83)
135 3vkg_A Dynein heavy chain, cyt 40.5 1.3E+02 0.0045 36.9 11.1 60 125-184 2011-2073(3245)
136 3b5n_B Protein SSO1; snare com 40.4 1.1E+02 0.0036 22.4 8.0 52 173-224 9-64 (69)
137 3gp4_A Transcriptional regulat 39.7 90 0.0031 25.7 7.2 10 109-118 56-65 (142)
138 3f6n_A Virion-associated prote 39.6 55 0.0019 27.8 5.8 44 161-204 3-49 (129)
139 3hnw_A Uncharacterized protein 39.4 1.4E+02 0.0049 24.9 8.4 54 153-206 82-135 (138)
140 3haj_A Human pacsin2 F-BAR; pa 38.8 2.4E+02 0.0083 27.3 11.1 37 120-156 128-164 (486)
141 2pnv_A Small conductance calci 38.8 46 0.0016 23.3 4.4 30 139-168 9-38 (43)
142 2dq3_A Seryl-tRNA synthetase; 38.6 58 0.002 31.6 6.7 63 144-210 35-97 (425)
143 2l3l_A Tubulin-specific chaper 38.5 1.3E+02 0.0046 24.3 7.9 73 135-209 31-105 (111)
144 4ack_A TSSL; protein transport 37.8 1E+02 0.0036 27.6 7.6 65 162-227 7-71 (185)
145 3hd7_A Vesicle-associated memb 37.7 1.2E+02 0.004 23.6 7.1 65 154-218 6-70 (91)
146 1sum_B Phosphate transport sys 37.4 1.9E+02 0.0066 24.6 9.4 79 123-201 13-108 (235)
147 3e7k_A TRPM7 channel; coiled-c 37.1 1.1E+02 0.0039 22.6 6.5 45 127-175 8-52 (56)
148 3ghg_B Fibrinogen beta chain; 36.7 2E+02 0.0069 28.9 10.3 35 115-149 82-116 (461)
149 2i0m_A Phosphate transport sys 35.8 1.5E+02 0.0051 24.7 8.1 46 122-167 12-57 (216)
150 1wt6_A Myotonin-protein kinase 35.6 1.3E+02 0.0044 23.8 7.0 35 169-203 26-60 (81)
151 1fxk_A Prefoldin; archaeal pro 35.6 62 0.0021 24.7 5.2 15 61-75 20-34 (107)
152 3gpv_A Transcriptional regulat 35.5 86 0.0029 25.8 6.4 27 183-209 104-130 (148)
153 3oz2_A Digeranylgeranylglycero 34.6 8.3 0.00028 33.8 0.0 14 9-22 7-20 (397)
154 3ghg_B Fibrinogen beta chain; 34.1 2.5E+02 0.0084 28.3 10.4 37 140-176 82-118 (461)
155 2j69_A Bacterial dynamin-like 34.0 2.8E+02 0.0096 28.3 11.1 79 126-210 594-684 (695)
156 4hpq_C ATG17, KLTH0D15642P; au 33.2 3.3E+02 0.011 26.8 11.0 16 124-139 204-219 (413)
157 3tul_A Cell invasion protein S 33.2 67 0.0023 28.1 5.5 21 192-212 104-124 (158)
158 2xz3_A Maltose ABC transporter 33.2 2E+02 0.0069 27.0 9.3 39 183-221 381-419 (463)
159 1xwj_B Talin, metavinculin; ce 32.7 29 0.00099 21.6 2.3 24 122-145 2-25 (26)
160 3ci9_A Heat shock factor-bindi 32.0 78 0.0027 22.6 4.8 38 125-162 6-47 (48)
161 1fxk_A Prefoldin; archaeal pro 31.1 1.1E+02 0.0038 23.2 6.0 16 124-139 61-76 (107)
162 3lss_A Seryl-tRNA synthetase; 30.8 1.3E+02 0.0046 30.0 8.0 23 143-165 41-63 (484)
163 1qu7_A Methyl-accepting chemot 30.8 2.8E+02 0.0095 24.4 11.5 15 61-75 54-68 (227)
164 2zqm_A Prefoldin beta subunit 30.8 1.3E+02 0.0043 23.2 6.3 14 152-165 83-96 (117)
165 4hb9_A Similarities with proba 30.7 11 0.00036 33.6 0.0 13 9-21 4-16 (412)
166 1go4_E MAD1 (mitotic arrest de 30.7 42 0.0015 27.3 3.6 38 172-209 10-47 (100)
167 1lwu_C Fibrinogen gamma chain; 30.6 75 0.0026 30.4 5.8 10 192-201 44-53 (323)
168 4g2k_A General control protein 30.4 1.1E+02 0.0039 25.9 6.2 36 171-206 18-53 (125)
169 1fgj_A Hydroxylamine oxidoredu 30.2 15 0.00051 37.1 1.0 10 104-113 462-471 (546)
170 1x8y_A Lamin A/C; structural p 30.2 1.9E+02 0.0063 22.2 7.3 61 138-205 13-73 (86)
171 1fzc_A Fibrin; blood coagulati 29.9 51 0.0018 26.4 3.8 28 149-176 3-30 (87)
172 3edv_A Spectrin beta chain, br 29.4 2.3E+02 0.0079 24.8 8.5 57 148-205 187-243 (323)
173 3b5n_A Synaptobrevin homolog 1 29.4 1.6E+02 0.0053 21.1 6.9 22 137-158 4-25 (61)
174 1wyy_A E2 glycoprotein; membra 28.8 31 0.0011 30.0 2.6 83 127-209 56-144 (149)
175 2bsg_A Fibritin; viral protein 28.7 57 0.0019 33.2 4.8 85 124-210 43-130 (487)
176 1t72_A Phosphate transport sys 28.4 2.6E+02 0.0089 23.3 9.0 78 123-200 17-111 (227)
177 1mqs_A SLY1 protein, SLY1P; SM 28.1 2.6E+02 0.0087 28.4 9.6 69 116-184 329-432 (671)
178 2p22_A Suppressor protein STP2 28.0 1.2E+02 0.0042 26.6 6.4 51 117-167 34-84 (174)
179 3hh0_A Transcriptional regulat 27.9 1.7E+02 0.006 24.0 7.1 47 183-229 89-136 (146)
180 2a01_A Apolipoprotein A-I; fou 27.6 3.3E+02 0.011 24.2 9.5 60 131-190 62-126 (243)
181 1t3j_A Mitofusin 1; coiled coi 27.5 1.8E+02 0.0061 23.5 6.7 20 136-155 44-63 (96)
182 3mov_A Lamin-B1; LMNB1, B-type 27.5 2.2E+02 0.0075 22.5 7.2 69 130-205 14-82 (95)
183 1gl2_C VTI1B, vesicle transpor 26.9 1.8E+02 0.0061 21.2 6.2 50 154-203 3-52 (65)
184 3l39_A Putative PHOU-like phos 26.8 3.1E+02 0.011 23.8 8.9 76 133-208 99-178 (227)
185 3rkg_A Magnesium transporter M 26.4 2E+02 0.0069 26.5 7.8 39 126-166 132-170 (261)
186 2d5k_A DPS, DPS family protein 26.3 39 0.0013 27.6 2.7 98 104-216 26-126 (156)
187 3qne_A Seryl-tRNA synthetase, 26.3 3.1E+02 0.011 27.4 9.7 71 152-222 32-105 (485)
188 3swk_A Vimentin; cytoskeleton, 26.2 2.2E+02 0.0077 21.9 10.1 67 145-211 13-79 (86)
189 2v71_A Nuclear distribution pr 25.8 3.5E+02 0.012 24.0 14.1 90 137-226 33-133 (189)
190 3m3w_A Pacsin3, protein kinase 25.8 3.2E+02 0.011 24.8 9.1 33 122-154 128-160 (320)
191 1xwm_A PHOU, phosphate uptake 25.6 2.9E+02 0.01 23.0 9.4 44 123-166 13-56 (217)
192 1d7m_A Cortexillin I; coiled-c 25.6 2.7E+02 0.0091 22.7 7.3 28 126-153 2-32 (101)
193 2kvm_A Chromobox protein homol 25.5 31 0.0011 25.7 1.8 25 103-128 29-53 (74)
194 4ev6_A Magnesium transport pro 25.3 3.9E+02 0.013 24.4 9.9 21 124-144 167-187 (339)
195 4abm_A Charged multivesicular 25.2 2.3E+02 0.0079 21.7 8.5 65 143-208 10-79 (79)
196 3l4f_A RHO guanine nucleotide 25.0 1.3E+02 0.0045 22.6 5.1 44 169-212 9-52 (61)
197 3i00_A HIP-I, huntingtin-inter 25.0 97 0.0033 25.6 4.9 44 163-209 11-54 (120)
198 1gk4_A Vimentin; intermediate 24.7 2.3E+02 0.0079 21.5 8.6 40 166-205 32-71 (84)
199 3t37_A Probable dehydrogenase; 24.6 16 0.00054 34.6 0.0 15 9-23 20-34 (526)
200 2dfs_A Myosin-5A; myosin-V, in 24.6 5.5E+02 0.019 28.0 11.9 62 147-208 985-1050(1080)
201 2d9u_A Chromobox protein homol 24.6 23 0.00079 26.5 0.9 27 101-128 24-50 (74)
202 3u06_A Protein claret segregat 24.5 1.1E+02 0.0036 29.9 5.8 27 146-172 10-36 (412)
203 2lf0_A Uncharacterized protein 24.5 76 0.0026 26.9 4.1 55 151-214 8-62 (123)
204 3abi_A Putative uncharacterize 24.5 14 0.00049 34.1 -0.3 16 7-23 18-33 (365)
205 1svf_B Protein (fusion glycopr 24.2 52 0.0018 22.3 2.6 21 133-153 10-30 (38)
206 1avo_B 11S regulator; proteaso 24.0 3.2E+02 0.011 23.0 8.7 82 124-205 6-87 (140)
207 1tqg_A Chemotaxis protein CHEA 23.8 2E+02 0.0067 21.6 6.2 38 168-207 37-74 (105)
208 3c9i_A Tail needle protein GP2 23.8 2.6E+02 0.0089 25.8 7.8 41 168-208 106-146 (242)
209 3trt_A Vimentin; cytoskeleton, 23.8 2.2E+02 0.0074 20.8 8.2 37 172-208 40-76 (77)
210 3he5_B Synzip2; heterodimeric 23.7 1.3E+02 0.0046 21.5 4.7 34 176-209 12-45 (52)
211 1mqm_B Hemagglutinin HA2 chain 23.7 24 0.00082 32.3 1.0 47 121-167 36-89 (221)
212 2qyw_A Vesicle transport throu 23.6 2.5E+02 0.0087 22.0 7.0 61 134-194 14-76 (102)
213 2efr_A General control protein 23.6 3.5E+02 0.012 23.2 10.4 76 125-200 74-152 (155)
214 1aq5_A Matrilin-1, CMP, cartil 23.5 1.3E+02 0.0044 21.6 4.6 9 151-159 35-43 (47)
215 2d4y_A HAP1, flagellar HOOK-as 23.4 4.9E+02 0.017 24.9 10.3 37 121-157 64-100 (463)
216 2h1e_A Chromo domain protein 1 23.3 61 0.0021 28.1 3.5 27 105-132 48-74 (177)
217 3r4h_A Coiled coil helix CC-TE 23.2 53 0.0018 21.8 2.3 25 171-195 6-30 (34)
218 4abx_A DNA repair protein RECN 23.1 2.2E+02 0.0074 23.9 6.9 120 37-173 16-142 (175)
219 1jig_A DLP-2; dodecamer, four- 23.1 47 0.0016 26.4 2.6 97 105-216 25-124 (146)
220 1yvv_A Amine oxidase, flavin-c 23.0 18 0.0006 31.5 0.0 14 9-22 5-18 (336)
221 3iyk_A VP5; icosahedral virus; 22.9 2E+02 0.007 29.4 7.6 52 112-167 81-132 (526)
222 1xsv_A Hypothetical UPF0122 pr 22.8 2.7E+02 0.0093 21.7 7.8 34 125-158 43-76 (113)
223 3q0x_A Centriole protein; cent 22.6 1.8E+02 0.006 26.6 6.5 43 145-187 163-205 (228)
224 2ocy_A RAB guanine nucleotide 22.4 2.9E+02 0.0098 23.9 7.5 59 126-184 77-146 (154)
225 2ieq_A S glycoprotein, spike g 22.3 2.9E+02 0.01 22.9 7.2 101 128-228 1-102 (109)
226 4gip_D Fusion glycoprotein F1; 22.2 62 0.0021 32.1 3.6 52 132-194 346-397 (409)
227 3qao_A LMO0526 protein, MERR-l 22.1 77 0.0026 28.5 4.1 31 184-214 86-116 (249)
228 2xz3_A Maltose ABC transporter 22.0 1.4E+02 0.005 28.0 6.1 54 168-226 380-433 (463)
229 2ke4_A CDC42-interacting prote 22.0 1.6E+02 0.0056 23.4 5.5 18 148-165 17-34 (98)
230 1ses_A Seryl-tRNA synthetase; 22.0 3.5E+02 0.012 26.1 8.9 22 136-157 39-60 (421)
231 3i2w_A Syndapin, LD46328P; EFC 22.0 4E+02 0.014 23.3 9.7 39 121-159 114-152 (290)
232 1l8d_A DNA double-strand break 21.9 2.7E+02 0.0093 21.3 8.8 38 167-204 64-101 (112)
233 2dq0_A Seryl-tRNA synthetase; 21.8 2.1E+02 0.0071 28.1 7.4 71 153-223 31-104 (455)
234 4gde_A UDP-galactopyranose mut 21.8 25 0.00086 32.6 0.8 14 9-22 13-26 (513)
235 2bez_C E2 glycoprotein; coiled 21.7 2.9E+02 0.01 21.6 8.7 21 125-145 13-33 (77)
236 2iub_A CORA, divalent cation t 21.7 4.8E+02 0.016 24.1 10.1 7 21-27 45-51 (363)
237 2z5i_A TM, general control pro 21.6 1.3E+02 0.0045 21.4 4.4 31 149-179 15-45 (52)
238 2fxo_A Myosin heavy chain, car 21.4 3.3E+02 0.011 22.0 8.9 66 128-193 58-123 (129)
239 4aj5_A SKA1, spindle and kinet 21.3 3.2E+02 0.011 22.0 9.5 45 179-227 35-79 (91)
240 2wrg_I Hemagglutinin HA2 chain 21.3 69 0.0024 29.4 3.5 46 121-166 36-88 (222)
241 3c98_B Syntaxin-1A; protein co 21.3 3.7E+02 0.013 22.6 8.5 21 128-148 47-67 (279)
242 3lwe_A M-phase phosphoprotein 21.2 29 0.00098 25.1 0.8 40 105-148 21-60 (62)
243 3p8q_A GP5, head protein; viru 21.0 20 0.0007 33.9 0.0 63 138-207 5-67 (385)
244 3kpe_A Fusion glycoprotein F0; 20.9 2E+02 0.0068 20.9 5.2 40 159-198 3-42 (51)
245 3m91_A Proteasome-associated A 20.7 1.5E+02 0.0052 21.3 4.6 32 151-182 14-45 (51)
246 3zrx_A AF1503 protein, osmolar 20.7 2.2E+02 0.0076 19.8 8.8 17 168-184 67-83 (115)
247 1nfn_A Apolipoprotein E3; lipi 20.6 3.6E+02 0.012 23.3 7.9 24 167-190 99-122 (191)
248 1urq_A M-tomosyn isoform; tran 20.6 2.6E+02 0.0088 20.5 6.5 30 130-159 6-35 (63)
249 1lwu_A Fibrinogen alpha-1 chai 20.4 1.1E+02 0.0038 25.7 4.3 28 149-176 25-52 (119)
250 3kqg_A Langerin, C-type lectin 20.2 1.3E+02 0.0045 24.3 4.8 16 150-165 3-18 (182)
251 1r8e_A Multidrug-efflux transp 20.1 1.6E+02 0.0055 25.5 5.6 28 147-174 80-107 (278)
No 1
>2ba2_A D12_ORF131, hypothetical UPF0134 protein MPN010; DUF16, hypothetical protein, coiled-coil, stutter, structural genomics, PSI; 1.80A {Mycoplasma pneumoniae} SCOP: h.1.30.1
Probab=93.72 E-value=0.12 Score=41.36 Aligned_cols=77 Identities=17% Similarity=0.235 Sum_probs=50.1
Q ss_pred hhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHH
Q 020328 120 FATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQT 199 (327)
Q Consensus 120 fVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~ 199 (327)
|||+|-+..-..+. ++|..|.+|+..+...+.-|-|-+..=-+++.+++..-..-|.-++.|-....+
T Consensus 8 YVT~Kqf~e~l~~F------------k~~~~~~~~~~kie~~~~~QgEqI~~qGeqIkeLq~eqkaQg~tl~lil~tL~~ 75 (85)
T 2ba2_A 8 YVTHKQLDEKLKNF------------VTKTEFKEFQTVVMESFAVQNQNIDAQGEQIKELQVEQKAQGKTLQLILEALQG 75 (85)
T ss_dssp BCBHHHHHHHHTTB------------CBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeHHHHHHHHHhh------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89998877642221 345555556555655555555555544455666655556667777888888888
Q ss_pred HHHHHHHhh
Q 020328 200 LESKLIEIE 208 (327)
Q Consensus 200 Le~Ki~~ie 208 (327)
+..+||.||
T Consensus 76 ~nkRLDkle 84 (85)
T 2ba2_A 76 INKRLDNLE 84 (85)
T ss_dssp HHHHHHHHT
T ss_pred HHHHhhccC
Confidence 888888886
No 2
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=92.98 E-value=1.1 Score=36.65 Aligned_cols=80 Identities=10% Similarity=0.282 Sum_probs=63.6
Q ss_pred HHHHhhh---HHHHHHHHHHHHHHHHhhhhhh----hhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHH
Q 020328 131 NSVARQL---EDVYSSISAAQRQLSSKITSVD----RDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESK 203 (327)
Q Consensus 131 ~svtKqL---eqVs~sLaaaKrHLsqRId~vD----~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~K 203 (327)
+.++||| .|..+.+..+|+.|..+|+.+. .|++++.+....++.|+..-..+|..+..+++....-=..|..+
T Consensus 11 aE~~KqL~~~~q~~~e~e~~k~eL~~~~~~~~~~~~~k~~eq~~~le~lk~eL~~~~~el~~lq~~l~~~~~~~~~l~~~ 90 (107)
T 2no2_A 11 AEVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQVLQGSLETSAQSEANWAAE 90 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566776 4677889999999999999965 67788888888888888888888888888888888777777777
Q ss_pred HHHhhhh
Q 020328 204 LIEIEGK 210 (327)
Q Consensus 204 i~~ie~k 210 (327)
++.++.-
T Consensus 91 ~~~l~~E 97 (107)
T 2no2_A 91 FAELEKE 97 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766543
No 3
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=89.73 E-value=2.3 Score=42.71 Aligned_cols=97 Identities=10% Similarity=0.199 Sum_probs=64.2
Q ss_pred CCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHH---HHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchh-----hh
Q 020328 115 LPDMMFATRRSLSDACNSVARQLEDVYSSISAAQ---RQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSK-----LI 186 (327)
Q Consensus 115 ~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaK---rHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls-----~i 186 (327)
+.|+|=-..++....+..|-..|++++..-..++ ++|+..+...+.++.++.+..+.-.+++.+.+.-++ ++
T Consensus 87 l~D~L~k~q~~V~~~LqeLe~~l~~lsn~Ts~~~~~i~~Iq~slk~~Q~Qi~en~n~~~~~~~~~e~~~~~i~~~~~~~~ 166 (464)
T 1m1j_B 87 LQTTLLKQEKTVKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNDIILSEYNTEMELHYNYIKDNLDNNI 166 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHhhhhhHhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3788888899999999999999999987777665 346666666666666655555555555544443332 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhh
Q 020328 187 GDEFQSVRDIVQTLESKLIEIEGKQ 211 (327)
Q Consensus 187 g~Dv~~v~~~V~~Le~Ki~~ie~kQ 211 (327)
...+..++..+..|..||..+|.+-
T Consensus 167 ~~~i~~L~~~~~~l~~ki~~l~~~~ 191 (464)
T 1m1j_B 167 PSSLRVLRAVIDSLHKKIQKLENAI 191 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666667766666553
No 4
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=88.05 E-value=6 Score=37.67 Aligned_cols=78 Identities=13% Similarity=0.121 Sum_probs=57.9
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHH
Q 020328 125 SLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESK 203 (327)
Q Consensus 125 nmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~K 203 (327)
-|.+++..+-..=..+.++|..+.+.+.+-|++.-.. .|+......++.++++++.++.++.-.-..-++.|-+|-..
T Consensus 356 ~~~~~~~~vl~G~~t~eeal~~~~~~i~~~l~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (471)
T 3mq9_A 356 AVRTAVINAASGRQTVDEALKDAQTRITAARDGLRAV-MEARNVTHLLQQELTEAQKGFQDVEAQAATANHTVMALMAS 433 (471)
T ss_dssp HHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhHHH-HHhhhHHHHHHHHHHHHhhhHHHHHHHhhhcchhHHHHHHH
Confidence 4555555554443456788888888888888887444 47788899999999999999999988888888777666443
No 5
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=87.86 E-value=3.1 Score=39.81 Aligned_cols=66 Identities=9% Similarity=-0.056 Sum_probs=53.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHH
Q 020328 158 VDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCD 223 (327)
Q Consensus 158 vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~ 223 (327)
+....+++.++.++.+.|-..++.|.+.++.+++.+++--..++..+.++...=.-+++-...+|.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (487)
T 3oja_A 412 LRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVV 477 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHH
Confidence 445666677788888888888889999999999999888888888888887777777777777775
No 6
>3g67_A Methyl-accepting chemotaxis protein; four-helix bundle, signaling protein; 2.17A {Thermotoga maritima} PDB: 3g6b_A 3ur1_C
Probab=87.67 E-value=4.8 Score=36.12 Aligned_cols=39 Identities=15% Similarity=0.277 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHH
Q 020328 126 LSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNK 164 (327)
Q Consensus 126 msnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDe 164 (327)
++.|+..+...+..+.+.+..+-+++..-++.+....++
T Consensus 5 va~a~~em~~~i~~i~~~~~~~s~~~~~~~~~~~~~~~~ 43 (213)
T 3g67_A 5 VKERFVNLNRLFQELVGDFQAKSDQLVSVIQDMEKISEN 43 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555544444444444444444333333
No 7
>3g67_A Methyl-accepting chemotaxis protein; four-helix bundle, signaling protein; 2.17A {Thermotoga maritima} PDB: 3g6b_A 3ur1_C
Probab=87.55 E-value=7.6 Score=34.79 Aligned_cols=61 Identities=11% Similarity=0.129 Sum_probs=27.2
Q ss_pred HHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHH
Q 020328 133 VARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSV 193 (327)
Q Consensus 133 vtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v 193 (327)
+...++++++.+...-.++....+.+....+++.++++.+.+++......+..+...+..+
T Consensus 5 va~a~~em~~~i~~i~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (213)
T 3g67_A 5 VKERFVNLNRLFQELVGDFQAKSDQLVSVIQDMEKISENIMEELKKSGTNVDQIVERVKEA 65 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444444444444444444444444333333333
No 8
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=86.82 E-value=1.5 Score=36.20 Aligned_cols=40 Identities=15% Similarity=0.281 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 169 SQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 169 s~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
...++.|+++++..+.....++++++.....||..|...|
T Consensus 31 l~~~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e 70 (129)
T 3tnu_B 31 LRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAE 70 (129)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3334444444444444444444444444444444444433
No 9
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=86.66 E-value=4.7 Score=39.84 Aligned_cols=95 Identities=9% Similarity=0.136 Sum_probs=51.0
Q ss_pred CCchhhhhhhhHHHHHHHHHhhhHHHH-------HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhh
Q 020328 115 LPDMMFATRRSLSDACNSVARQLEDVY-------SSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIG 187 (327)
Q Consensus 115 ~SDlMfVTKRnmsnAv~svtKqLeqVs-------~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig 187 (327)
+-++|==+-|++.+.++.+...|+.++ .-+..++.-|.+|.....+.=+-..|.+..++.....++++|.+--
T Consensus 54 Lqg~Ldk~er~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~ 133 (390)
T 1deq_A 54 MKGLIDEVDQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQV 133 (390)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334555566777777777777776653 3344555555555555555555555555555555555555544322
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh
Q 020328 188 DEFQSVRDIVQTLESKLIEIEG 209 (327)
Q Consensus 188 ~Dv~~v~~~V~~Le~Ki~~ie~ 209 (327)
-.|..++..|+.+-.||.+||-
T Consensus 134 ~~ir~Lq~~l~~q~~kiqRLE~ 155 (390)
T 1deq_A 134 QRINLLQKNVRDQLVDMKRLEV 155 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 2444444444444444444443
No 10
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=85.51 E-value=7.9 Score=39.80 Aligned_cols=96 Identities=8% Similarity=0.114 Sum_probs=63.3
Q ss_pred CchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHH-------HHHHHHHHHHHHhhcchhhhhh
Q 020328 116 PDMMFATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIV-------EISQATQEEVTILRGRSKLIGD 188 (327)
Q Consensus 116 SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~-------eis~~ik~eV~~v~~dls~ig~ 188 (327)
-++|-=+-|++.+-++.|-.+|++++.+=..+-....+-.+.+-.++.+.. |++...+..+..++..|.+--.
T Consensus 52 QglLdkqErDltkrINELKnqLEdlsKnsKdseqy~k~~~E~Lr~rq~q~~dNdNtynE~S~ELRRrIqyLKekVdnQls 131 (562)
T 3ghg_A 52 KGLIDEVNQDFTNRINKLKNSLFEYQKNNKDSHSLTTNIMEILRGDFSSANNRDNTYNRVSEDLRSRIEVLKRKVIEKVQ 131 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHhhcCcHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777889999999999999999987766666666555555555554444 4444444444455555444445
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q 020328 189 EFQSVRDIVQTLESKLIEIEGKQ 211 (327)
Q Consensus 189 Dv~~v~~~V~~Le~Ki~~ie~kQ 211 (327)
-++.||..|+.+-.||.++|---
T Consensus 132 nIrvLQsnLedq~~kIQRLEvDI 154 (562)
T 3ghg_A 132 HIQLLQKNVRAQLVDMKRLEVDI 154 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566677777777777777553
No 11
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=85.49 E-value=1.5 Score=36.34 Aligned_cols=64 Identities=6% Similarity=0.286 Sum_probs=26.9
Q ss_pred HHHHHHHHHH---HHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 020328 141 YSSISAAQRQ---LSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEI 207 (327)
Q Consensus 141 s~sLaaaKrH---LsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~i 207 (327)
.+.+..+|.+ |..+|++|...++.+...-....+.+.++.. +...+++.++..+..||.-|..+
T Consensus 30 ~~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~---~~~~~l~~~q~~i~~lE~eL~~~ 96 (131)
T 3tnu_A 30 SELVQSGKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKG---RYCMQLAQIQEMIGSVEEQLAQL 96 (131)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445432 3345555655555555544444444444443 23334555555555555555443
No 12
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=84.57 E-value=6.9 Score=29.16 Aligned_cols=70 Identities=19% Similarity=0.254 Sum_probs=47.4
Q ss_pred hHHHHHHHHHhhhHHHHH-HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHH
Q 020328 125 SLSDACNSVARQLEDVYS-SISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVR 194 (327)
Q Consensus 125 nmsnAv~svtKqLeqVs~-sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~ 194 (327)
.|+.+.+.|=.|-|.+-. .-+.+..-...+++.+........+-...+++|+++++..+....-|+++++
T Consensus 6 DL~~il~eiRaQYE~ia~knr~EaE~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 6 DCTAAMRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 466777777777665433 3445666677778777777777777777777777777777666666666553
No 13
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=84.38 E-value=4.9 Score=36.22 Aligned_cols=57 Identities=4% Similarity=0.114 Sum_probs=26.2
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhh--cchhhhhhHHHHHHHHHHHHHHHHHHhhhhh
Q 020328 155 ITSVDRDVNKIVEISQATQEEVTILR--GRSKLIGDEFQSVRDIVQTLESKLIEIEGKQ 211 (327)
Q Consensus 155 Id~vD~kLDeq~eis~~ik~eV~~v~--~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQ 211 (327)
|.+++..+++..+-.+..++....++ .++..+..+++....-...||.+|-++...-
T Consensus 62 ~~~~e~~i~~~~~ri~~~~~~l~~v~~~kE~~aL~kEie~~~~~i~~lE~eile~~e~i 120 (256)
T 3na7_A 62 VSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEI 120 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444443333332 2344455555555555555555555554443
No 14
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=83.59 E-value=14 Score=31.93 Aligned_cols=77 Identities=13% Similarity=0.223 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH------------HhhcchhhhhhHHHHHHHHHH--------HHHH
Q 020328 143 SISAAQRQLSSKITSVDRDVNKIVEISQATQEEVT------------ILRGRSKLIGDEFQSVRDIVQ--------TLES 202 (327)
Q Consensus 143 sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~------------~v~~dls~ig~Dv~~v~~~V~--------~Le~ 202 (327)
-+.+-|++|..+.|+|=.++|+.+.+.+..|++|. .+..|+.....|++.+...+. .+|.
T Consensus 11 y~~~~k~kL~~~sd~LvtkVDDLQD~VE~LRkDV~~RgvrP~~~ql~~v~kdi~~a~~eL~~m~~~i~~ekP~WKKiWE~ 90 (141)
T 3okq_A 11 YMEKSQTELGDLSDTLLSKVDDLQDVIEIMRKDVAERRSQPAKKKLETVSKDLENAQADVLKLQEFIDTEKPHWKKTWEA 90 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHHHHHH
Confidence 35677888888888888888888888888888764 344555555555555555543 4677
Q ss_pred HHHHhhhhhhhHhHHHH
Q 020328 203 KLIEIEGKQDITTLGVK 219 (327)
Q Consensus 203 Ki~~ie~kQd~Tn~GV~ 219 (327)
-|..|..-|+|=|.==.
T Consensus 91 EL~~VceEQqfl~~Qed 107 (141)
T 3okq_A 91 ELDKVCEEQQFLTLQEE 107 (141)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777777777665433
No 15
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=82.66 E-value=1.3 Score=29.44 Aligned_cols=29 Identities=21% Similarity=0.371 Sum_probs=25.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhhh
Q 020328 183 SKLIGDEFQSVRDIVQTLESKLIEIEGKQ 211 (327)
Q Consensus 183 ls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQ 211 (327)
++++.+|+.+++.+|+.|..+++++|..-
T Consensus 1 isrlee~~r~l~~ivq~lq~r~drle~tv 29 (32)
T 2akf_A 1 VSRLEEDVRNLNAIVQKLQERLDRLEETV 29 (32)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36778899999999999999999999764
No 16
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=82.63 E-value=3.1 Score=34.91 Aligned_cols=59 Identities=19% Similarity=0.279 Sum_probs=33.0
Q ss_pred hhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhh-hHHHHHHHHHHHHHHHHHhhcc
Q 020328 122 TRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDR-DVNKIVEISQATQEEVTILRGR 182 (327)
Q Consensus 122 TKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~-kLDeq~eis~~ik~eV~~v~~d 182 (327)
|++-|.++|.++..+|+.+.+++..+.++=. |- +++. .+..=+.....++++|..++..
T Consensus 68 ~~~EL~~~l~sie~dLeDLe~sI~ivE~np~-kF-~l~~~Ei~~Rr~fV~~~r~~I~~mk~~ 127 (130)
T 4dnd_A 68 TTNELRNGLRSIEWDLEDLEETIGIVEANPG-KF-KLPAGDLQERKVFVERMREAVQEMKDH 127 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH-HH-CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-hc-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777777777777777777777665432 22 2222 2444444555555555444443
No 17
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=82.63 E-value=2.4 Score=33.90 Aligned_cols=60 Identities=8% Similarity=0.090 Sum_probs=40.4
Q ss_pred hhhhhhhhHHHHHHHHHhhhHHHHHHHH-HHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 020328 118 MMFATRRSLSDACNSVARQLEDVYSSIS-AAQRQLSSKITSVDRDVNKIVEISQATQEEVTILR 180 (327)
Q Consensus 118 lMfVTKRnmsnAv~svtKqLeqVs~sLa-aaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~ 180 (327)
++----+.+...++++.+.++++..... ..|+. .|..++..|||..|+.+++.-||..+-
T Consensus 16 lFe~YE~df~~l~~~i~~kl~~i~~~~~~e~rk~---~i~~ie~~ldEA~eLl~qMelE~r~~p 76 (102)
T 2qyw_A 16 HFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKK---LVRDFDEKQQEANETLAEMEEELRYAP 76 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCcHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3333345566777777777777643322 34443 377788889999999999988887653
No 18
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=82.24 E-value=3.8 Score=32.40 Aligned_cols=53 Identities=9% Similarity=0.173 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 020328 124 RSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTIL 179 (327)
Q Consensus 124 RnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v 179 (327)
..+...++++...|+++...=...|+. -|..++..+||..|+..++.-||..+
T Consensus 8 ~df~~~~~~i~~~l~~~~~~~ge~Rk~---~i~~ie~~ldEA~ell~qMelE~~~~ 60 (97)
T 3onj_A 8 SDFKTTLEQAKASLAEAPSQPLSQRNT---TLKHVEQQQDELFDLLDQMDVEVNNS 60 (97)
T ss_dssp HHHHHHHHHHHHHHHHGGGSCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccChHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345677888888888776333334443 47778889999999999999999888
No 19
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=80.59 E-value=12 Score=36.34 Aligned_cols=37 Identities=3% Similarity=0.083 Sum_probs=30.3
Q ss_pred hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhh
Q 020328 123 RRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVD 159 (327)
Q Consensus 123 KRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD 159 (327)
...+.+.+..+...+++....++..++++..|++...
T Consensus 458 ~~~~~~~i~~l~~~~~~~~~~l~~~~~~i~~~~~~~~ 494 (597)
T 3oja_B 458 VNELRAEVQQLTNEQIQQEQLLQGLHAEIDTNLRRYR 494 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcC
Confidence 3446678888888888999999999999988887766
No 20
>2yo3_A General control protein GCN4, putative inner MEMB protein, general control protein...; HANS motif, YADA-like head, ylhead; 2.00A {Saccharomyces cerevisiae}
Probab=80.47 E-value=2.9 Score=39.50 Aligned_cols=58 Identities=9% Similarity=0.213 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHH
Q 020328 137 LEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVR 194 (327)
Q Consensus 137 LeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~ 194 (327)
..|++++++.++....+|+..|+.+++....=..++.+.|.++-..+-.|..+++.|+
T Consensus 200 v~QL~~s~~~an~yTd~k~~~l~n~I~~V~n~~~q~~~~~~~~~~~~~~~~~~~~~~~ 257 (268)
T 2yo3_A 200 YAQLKRSVEEANTYTDQKMGEMNSKIKGVENKMKQIEDKIEEILSKIYHIENEIARIK 257 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677788999999888888887777766655555555555555444444444444443
No 21
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=80.31 E-value=23 Score=29.14 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=13.6
Q ss_pred HHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 020328 174 EEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEI 207 (327)
Q Consensus 174 ~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~i 207 (327)
.++..+...+..+..++..+..-+..++..+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (284)
T 1c1g_A 69 EKLELAEKKATDAEADVASLNRRIQLFEEELDRA 102 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444444444444444444443333
No 22
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=79.84 E-value=32 Score=33.32 Aligned_cols=24 Identities=8% Similarity=0.163 Sum_probs=8.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhh
Q 020328 137 LEDVYSSISAAQRQLSSKITSVDR 160 (327)
Q Consensus 137 LeqVs~sLaaaKrHLsqRId~vD~ 160 (327)
+.++-+.+....+.+.+.-+.++.
T Consensus 465 i~~l~~~~~~~~~~l~~~~~~i~~ 488 (597)
T 3oja_B 465 VQQLTNEQIQQEQLLQGLHAEIDT 488 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333333333333333333333333
No 23
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=79.66 E-value=1.9 Score=34.54 Aligned_cols=60 Identities=10% Similarity=0.134 Sum_probs=43.3
Q ss_pred hhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 020328 118 MMFATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILR 180 (327)
Q Consensus 118 lMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~ 180 (327)
++----+.+...++++.+.++++...=...|+. -|..++..|||..|+..++.-||..+-
T Consensus 6 lFe~YE~df~~l~~~i~~kl~~i~~~~geerk~---~i~~ie~~l~EA~ell~qMelE~r~~p 65 (102)
T 1vcs_A 6 SGEGYEQDFAVLTAEITSKIARVPRLPPDEKKQ---MVANVEKQLEEARELLEQMDLEVREIP 65 (102)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHGGGSCTTTHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 333334567778888888888876432333443 377888999999999999999987763
No 24
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=78.85 E-value=5.9 Score=33.75 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=21.5
Q ss_pred CCchhhhhhhhHHH------HHHHHHhhhHHHHHHHHHHHHHHHHhhhhhh
Q 020328 115 LPDMMFATRRSLSD------ACNSVARQLEDVYSSISAAQRQLSSKITSVD 159 (327)
Q Consensus 115 ~SDlMfVTKRnmsn------Av~svtKqLeqVs~sLaaaKrHLsqRId~vD 159 (327)
..|.+....+.|.. ..+.+...|+.++..|..+-..|..-.++++
T Consensus 68 ~~~~L~~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le 118 (175)
T 4abx_A 68 AAGLIGEAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSA 118 (175)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 44455555555443 2334444455555555555555554444443
No 25
>3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus}
Probab=78.45 E-value=42 Score=31.07 Aligned_cols=9 Identities=22% Similarity=0.313 Sum_probs=3.9
Q ss_pred HHHHHHHHH
Q 020328 61 LLAEVSSVQ 69 (327)
Q Consensus 61 L~aQV~~La 69 (327)
|...+++++
T Consensus 11 l~~~~~~ia 19 (341)
T 3zx6_A 11 LSNTVDKIA 19 (341)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444444
No 26
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=77.94 E-value=25 Score=30.72 Aligned_cols=70 Identities=9% Similarity=0.074 Sum_probs=43.4
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 129 ACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 129 Av~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
+|+.. +.+.+.-..|.....+|..||..++..+.+-....+.++|| +..++.-..-+|.|+..++
T Consensus 59 ~vs~~-~~~~~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DE--------------l~aLqlq~n~lE~kl~kLq 123 (152)
T 3a7p_A 59 IVSHD-DALLNTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAA--------------LISGTIENNVLQQKLSDLK 123 (152)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHH
T ss_pred cccch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHH
Confidence 44443 33444556666677777777777777666665555555555 4556666677777777776
Q ss_pred h-hhhh
Q 020328 209 G-KQDI 213 (327)
Q Consensus 209 ~-kQd~ 213 (327)
. +++.
T Consensus 124 ~EN~~L 129 (152)
T 3a7p_A 124 KEHSQL 129 (152)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 5 4444
No 27
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=77.48 E-value=15 Score=36.24 Aligned_cols=82 Identities=13% Similarity=0.184 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH----HHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHh
Q 020328 140 VYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEV----TILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITT 215 (327)
Q Consensus 140 Vs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV----~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn 215 (327)
+...|..+-|.+..||+.|...|++.....+.+-.-+ ..++.++.++.+-=..+.+.-+.||.+|.-|..+-+-..
T Consensus 54 Lqg~Ldk~er~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~ 133 (390)
T 1deq_A 54 MKGLIDEVDQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQV 133 (390)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5667778889999999999999999876666655443 345556666666666677777888888888877755544
Q ss_pred HHHHHH
Q 020328 216 LGVKKL 221 (327)
Q Consensus 216 ~GV~~L 221 (327)
.-|..|
T Consensus 134 ~~ir~L 139 (390)
T 1deq_A 134 QRINLL 139 (390)
T ss_pred HHHHHH
Confidence 444333
No 28
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=77.33 E-value=17 Score=28.77 Aligned_cols=69 Identities=14% Similarity=0.194 Sum_probs=53.1
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHH
Q 020328 154 KITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLC 222 (327)
Q Consensus 154 RId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC 222 (327)
-++.|..|+++..+.+...+-||.+++++-.....+.+.++.-...|+.....+..-|..=...|..|.
T Consensus 7 lleqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LL 75 (81)
T 2jee_A 7 VFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777888888888888888888888888888888888777777777777777777666666666663
No 29
>1kmi_Z CHEZ, chemotaxis protein CHEZ; four-helix bundle, signaling protein; HET: BCN; 2.90A {Escherichia coli} SCOP: h.4.11.1
Probab=77.23 E-value=15 Score=33.07 Aligned_cols=115 Identities=17% Similarity=0.201 Sum_probs=59.9
Q ss_pred hhHHHHHHHHH--hhhHHHHHHHHHHHHHHHHhhh-------hhhhhHHHHHHHHHHHHHHHHHhhcc----------hh
Q 020328 124 RSLSDACNSVA--RQLEDVYSSISAAQRQLSSKIT-------SVDRDVNKIVEISQATQEEVTILRGR----------SK 184 (327)
Q Consensus 124 RnmsnAv~svt--KqLeqVs~sLaaaKrHLsqRId-------~vD~kLDeq~eis~~ik~eV~~v~~d----------ls 184 (327)
|.|.++...++ +.|.+..+.|-.|+.+|.-=++ ++=+.+|.+..+...+.+++..++.. ++
T Consensus 26 R~Lh~sl~~l~~d~~l~~a~~~ipdA~~rL~~Vv~~TE~AA~~iLd~vE~~~~~~~~l~~~~~~l~~~w~~l~~~~~~~~ 105 (214)
T 1kmi_Z 26 RMLRDSLRELGLDQAIAEAAEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPIDLA 105 (214)
T ss_dssp HHHHHHHHHHTHHHHHHHTTTTHHHHHHHTTTHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCHH
T ss_pred HHHHHHHHHcCCChHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCHH
Confidence 45556655553 3333444555555555533222 22233444445555555555444311 11
Q ss_pred h-------hhhHHHHHHHHHHHHHHHHHHh---hhhhhhHhHHHHHHHHHHHhhccCCCcccee
Q 020328 185 L-------IGDEFQSVRDIVQTLESKLIEI---EGKQDITTLGVKKLCDRARELENGRPTELVQ 238 (327)
Q Consensus 185 ~-------ig~Dv~~v~~~V~~Le~Ki~~i---e~kQd~Tn~GV~~LC~f~~~~~~~~~~~~~Q 238 (327)
. +..=++.+......+...+.+| ..=||+|-+=|......++.++..-..=+..
T Consensus 106 ~~~~l~~~~~~~l~~v~~~~~~~~~~l~eIm~AqdFQDLTGQ~I~KVi~lv~~vE~~L~~ll~~ 169 (214)
T 1kmi_Z 106 DARELVTDTRQFLADVPAHTSFTNAQLLKIMMAQDFQDLTGQVIKRMMDVIQEIERQLLMVLLE 169 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111222223334455555555 4459999999999999888888877766544
No 30
>3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus}
Probab=76.60 E-value=48 Score=30.71 Aligned_cols=12 Identities=0% Similarity=0.268 Sum_probs=7.2
Q ss_pred HHHHHHHHHhcC
Q 020328 64 EVSSVQQELSHV 75 (327)
Q Consensus 64 QV~~LaqElr~L 75 (327)
-+++|...++.+
T Consensus 7 pl~~l~~~~~~i 18 (341)
T 3zx6_A 7 PIIELSNTVDKI 18 (341)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 455666666665
No 31
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=76.58 E-value=21 Score=26.59 Aligned_cols=70 Identities=13% Similarity=0.192 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhHHHH------------HHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHH
Q 020328 136 QLEDVYSSISAAQRQLSSKITSVDRDVNKI------------VEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESK 203 (327)
Q Consensus 136 qLeqVs~sLaaaKrHLsqRId~vD~kLDeq------------~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~K 203 (327)
+|+++...+..+...+.+.+++|...++.. .+.-...+..+..+..-|..|...+...-..++.-|.+
T Consensus 12 ~l~~~A~~~~~~~~~i~~~l~~L~~~~~~l~~~W~G~a~~aF~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~~~~~D~~ 91 (98)
T 3gwk_C 12 ELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDAD 91 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHBCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444433 33444455555555566666666666666555555555
Q ss_pred HH
Q 020328 204 LI 205 (327)
Q Consensus 204 i~ 205 (327)
+.
T Consensus 92 ~A 93 (98)
T 3gwk_C 92 IA 93 (98)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 32
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=76.57 E-value=21 Score=36.24 Aligned_cols=103 Identities=15% Similarity=0.221 Sum_probs=83.3
Q ss_pred cccCCCchhhhhhhhHHHHHHHHHhhhHHH-------HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcch
Q 020328 111 KGWKLPDMMFATRRSLSDACNSVARQLEDV-------YSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRS 183 (327)
Q Consensus 111 KGws~SDlMfVTKRnmsnAv~svtKqLeqV-------s~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dl 183 (327)
-|--+-++|-=+.|+..+.++.+.+.|+.+ +.-+..++.-|.+|.....+.=+-..|.+..++.....+++++
T Consensus 48 SGCrLqglL~kqerdv~~rI~kLkn~L~~~s~s~~~s~~y~~~~~~~lk~~~~q~~dndn~~~e~S~eLe~ri~yIK~kV 127 (491)
T 1m1j_A 48 SGCRMQGIIDDTDQNYSQRIDNIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQQLDENYGHVSTELRRRIVTLKQRV 127 (491)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccchhhHHHHhhhhHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 345566778888899999999888888877 4567778888888888888888888899999999998888888
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020328 184 KLIGDEFQSVRDIVQTLESKLIEIEGKQDI 213 (327)
Q Consensus 184 s~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~ 213 (327)
.+--.-|..+|..|+.+-.||.++|.--+.
T Consensus 128 d~qi~~IrvLq~~l~~q~skIQRLE~dI~~ 157 (491)
T 1m1j_A 128 ATQVNRIKALQNSIQEQVVEMKRLEVDIDI 157 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665577888888888888999988865433
No 33
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=76.43 E-value=22 Score=30.00 Aligned_cols=64 Identities=8% Similarity=0.147 Sum_probs=51.5
Q ss_pred HHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020328 150 QLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDI 213 (327)
Q Consensus 150 HLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~ 213 (327)
.+..+++.+...+++..+=....+.|+...+..++....++..++.-+..|+.++..+|.+.+.
T Consensus 72 k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~~ 135 (138)
T 3hnw_A 72 KAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELND 135 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455677777778777777778888888888888888888888888888888888888877654
No 34
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=75.69 E-value=28 Score=27.48 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHH
Q 020328 144 ISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCD 223 (327)
Q Consensus 144 LaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~ 223 (327)
|..=+....-|.+.+..++.+..+-.....++|..++..+..+..|++....-....-.|+..-+..-.-+-..|..|..
T Consensus 14 lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasLnR 93 (101)
T 3u59_A 14 LKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNR 93 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455566677777777777777777788888888888888888888777777777777777666666777777776
Q ss_pred HHHhhc
Q 020328 224 RARELE 229 (327)
Q Consensus 224 f~~~~~ 229 (327)
-+.-++
T Consensus 94 riqllE 99 (101)
T 3u59_A 94 RIQLVE 99 (101)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 665443
No 35
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=74.94 E-value=30 Score=28.58 Aligned_cols=70 Identities=14% Similarity=0.273 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHH---hhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHH
Q 020328 126 LSDACNSVARQLEDVYSSISAAQRQLSS---KITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRD 195 (327)
Q Consensus 126 msnAv~svtKqLeqVs~sLaaaKrHLsq---RId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~ 195 (327)
...++++=+..++.-|-+|++--|.|.| |++....+++|..+=-+++.+++.++-.+.-.|..++..++.
T Consensus 32 ~d~ri~~NtqaI~~NS~aiaanTr~lQqh~aRlnsqQrQI~ENhkEMKq~aaqsaaLlsk~yh~ene~ar~kk 104 (114)
T 2xzr_A 32 IDGRVTRNTQSIEKNSKAIAANTRTLQQHSARLDSQQRQINENHKEMKQIEDKIEEILSKIYHIENEIARIKK 104 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhHHHHHhchHHHHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4677888888888888888866666655 444444444544444455556666666655555555555543
No 36
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=74.78 E-value=7.6 Score=28.21 Aligned_cols=50 Identities=10% Similarity=0.195 Sum_probs=24.5
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHH
Q 020328 154 KITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLG 217 (327)
Q Consensus 154 RId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~G 217 (327)
.++.|..++..+++++..|.+|| +.=..+...|+.++++...+-..++.-
T Consensus 10 ~Ld~L~~~v~~lk~~a~~Ig~El--------------~~Qn~lLd~l~~~~d~~~~~l~~~~~r 59 (65)
T 1gl2_D 10 GLDALSSIISRQKQMGQEIGNEL--------------DEQNEIIDDLANLVENTDEKLRTEARR 59 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555555555555555 444444555555555554444444443
No 37
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=73.58 E-value=30 Score=34.71 Aligned_cols=44 Identities=9% Similarity=0.209 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchh
Q 020328 141 YSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSK 184 (327)
Q Consensus 141 s~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls 184 (327)
.+.|...++++...|+.|.+++++....+..+++=|..++..+.
T Consensus 88 ~D~L~k~q~~V~~~LqeLe~~l~~lsn~Ts~~~~~i~~Iq~slk 131 (464)
T 1m1j_B 88 QTTLLKQEKTVKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLV 131 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhHhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Confidence 55556666666666777777766666554444444444444433
No 38
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=73.50 E-value=19 Score=37.00 Aligned_cols=76 Identities=12% Similarity=0.186 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH----HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 020328 139 DVYSSISAAQRQLSSKITSVDRDVNKIVEISQAT----QEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDIT 214 (327)
Q Consensus 139 qVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~i----k~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~T 214 (327)
.+...|-.+-+-|+.||+.|-.++|+...-.+.+ +..+..++.++.+.++--..+.++-+.||.+|..|+.+-|--
T Consensus 50 rLQglLdkqErDltkrINELKnqLEdlsKnsKdseqy~k~~~E~Lr~rq~q~~dNdNtynE~S~ELRRrIqyLKekVdnQ 129 (562)
T 3ghg_A 50 RMKGLIDEVNQDFTNRINKLKNSLFEYQKNNKDSHSLTTNIMEILRGDFSSANNRDNTYNRVSEDLRSRIEVLKRKVIEK 129 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHhhcCcHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788899999999999999999986655544 455677777777777333334444447777777776664433
No 39
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=72.97 E-value=31 Score=32.69 Aligned_cols=42 Identities=7% Similarity=0.269 Sum_probs=27.7
Q ss_pred hhHHHHHHHHHhhhHHHHHHHH------HHHHHHHHhhhhhhhhHHHH
Q 020328 124 RSLSDACNSVARQLEDVYSSIS------AAQRQLSSKITSVDRDVNKI 165 (327)
Q Consensus 124 RnmsnAv~svtKqLeqVs~sLa------aaKrHLsqRId~vD~kLDeq 165 (327)
....+|++.+.+++++.-+.+. .+.++|.+.|+++.+++-+.
T Consensus 369 ~t~eeal~~~~~~i~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 416 (471)
T 3mq9_A 369 QTVDEALKDAQTRITAARDGLRAVMEARNVTHLLQQELTEAQKGFQDV 416 (471)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHhhhHHHH
Confidence 4566677777666666544443 34566888888888877654
No 40
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=72.30 E-value=6 Score=32.05 Aligned_cols=56 Identities=21% Similarity=0.259 Sum_probs=44.1
Q ss_pred HHhhhheeeEEecccCCCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Q 020328 99 VIVAVGYGYVWWKGWKLPDMMFATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTI 178 (327)
Q Consensus 99 ~iGavGYgYmwWKGws~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~ 178 (327)
++.-+|.|||=.+- +..|++.|..||+.++..+++..+....++++++.
T Consensus 72 V~v~lG~g~~vE~~-------------------------------~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~ 120 (133)
T 1fxk_C 72 VIMSVGAGVAIKKN-------------------------------FEDAMESIKSQKNELESTLQKMGENLRAITDIMMK 120 (133)
T ss_dssp EEEEEETTEEEEEE-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCEEEEee-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45578999998873 47888899999999999999888888888888777
Q ss_pred hhcchhh
Q 020328 179 LRGRSKL 185 (327)
Q Consensus 179 v~~dls~ 185 (327)
+...+.+
T Consensus 121 ~~~~l~~ 127 (133)
T 1fxk_C 121 LSPQAEE 127 (133)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665443
No 41
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=72.01 E-value=29 Score=34.20 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 020328 168 ISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEI 207 (327)
Q Consensus 168 is~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~i 207 (327)
-++.+.+|+..+...+.+....+..++.++..++.||..+
T Consensus 85 ~skkml~~~~~~e~~~~~~~~~i~~l~~~~~~~~~~i~~l 124 (409)
T 1m1j_C 85 KSKKIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQL 124 (409)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhHHHHHHH
Confidence 3344444444444444444444444444444444444443
No 42
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=71.74 E-value=35 Score=26.89 Aligned_cols=67 Identities=22% Similarity=0.298 Sum_probs=42.2
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHH
Q 020328 135 RQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLE 201 (327)
Q Consensus 135 KqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le 201 (327)
|+.++-...+..--..|..||..+...+|...+-....+.++.+.....+.--.++.++++-++-||
T Consensus 33 k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasLnRriqllE 99 (101)
T 3u59_A 33 KQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4444444444444455667777777777777666666666666666666666667777776666554
No 43
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=71.74 E-value=13 Score=28.26 Aligned_cols=40 Identities=15% Similarity=0.258 Sum_probs=29.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHH
Q 020328 184 KLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCD 223 (327)
Q Consensus 184 s~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~ 223 (327)
..||.|++.=..++..|+.++++...+=..++.-+..+..
T Consensus 36 ~~Ig~El~~Qn~lLd~l~~~~d~~~~~L~~~~~r~~~~~~ 75 (82)
T 2nps_D 36 QRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSH 75 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666667777778888888888877777777776644
No 44
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=71.72 E-value=21 Score=28.09 Aligned_cols=65 Identities=17% Similarity=0.289 Sum_probs=41.3
Q ss_pred hhHHHHHHHHH---hhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHH
Q 020328 124 RSLSDACNSVA---RQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTL 200 (327)
Q Consensus 124 RnmsnAv~svt---KqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~L 200 (327)
++|.+-+.++= ++|-..-.+|.-+|+.|..|+|.|.+.- +.+..++.+++++-..+
T Consensus 5 ~gmgkevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~---------------------e~l~~El~s~~~~~~r~ 63 (77)
T 2w83_C 5 EFMGREVENLILENTQLLETKNALNIVKNDLIAKVDELTCEK---------------------DVLQGELEAVKQAKLKL 63 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---------------------HHHHHHHHHHHHHHHHH
Confidence 34555555553 3444456688889999999888776543 33455678888888888
Q ss_pred HHHHHHhhh
Q 020328 201 ESKLIEIEG 209 (327)
Q Consensus 201 e~Ki~~ie~ 209 (327)
+.|+.++|.
T Consensus 64 ~~ri~elEe 72 (77)
T 2w83_C 64 EEKNRELEE 72 (77)
T ss_dssp HHHC-----
T ss_pred HHHHHHHHH
Confidence 888888775
No 45
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=71.68 E-value=23 Score=26.91 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=32.0
Q ss_pred HHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 150 QLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 150 HLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
....|.+.+..++.+...-.....+||..++..+..+..|++....-+.....||..-+
T Consensus 17 ~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLeeae 75 (81)
T 1ic2_A 17 NALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELAD 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555555555555666666666666666655555555555554433
No 46
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=71.54 E-value=21 Score=25.90 Aligned_cols=53 Identities=8% Similarity=0.110 Sum_probs=27.0
Q ss_pred HhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHH
Q 020328 153 SKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVK 219 (327)
Q Consensus 153 qRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~ 219 (327)
+.++.|..++..++.++..|.+|+ +.=..+...|+.++++...+=..++.-+.
T Consensus 10 ~~Ld~L~~~v~~lk~la~~ig~El--------------~~Qn~~Ld~l~~~~d~~~~~l~~~~~rl~ 62 (66)
T 1n7s_D 10 ENLEQVSGIIGNLRHMALDMGNEI--------------DTQNRQIDRIMEKADSNKTRIDEANQRAT 62 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 344444444445555555555544 44455555555555555555555544443
No 47
>3c9i_A Tail needle protein GP26; xenon, coiled-coil, protein fiber, coiled coil, late protein, viral protein; 1.95A {Bacteriophage P22} PDB: 2poh_A
Probab=70.92 E-value=11 Score=34.71 Aligned_cols=59 Identities=20% Similarity=0.268 Sum_probs=49.9
Q ss_pred HHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhh
Q 020328 152 SSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGK 210 (327)
Q Consensus 152 sqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k 210 (327)
..||..+..++|+..+=+-...+.+....-.+.++..||..++.-|..||+|+...|.+
T Consensus 83 e~rI~a~~a~l~dHE~RIt~~~~~ia~~e~Rit~~e~~i~~l~~~v~~ld~~vt~~et~ 141 (242)
T 3c9i_A 83 EARIKQLRIDVDDHESRITANTKAITALNVRVTTAEGEIASLQTNVSALDGRVTTAENN 141 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhcccccHHHHhhhhhhhhhhhhheeecccccchhhhhhhhhhcccccccccc
Confidence 57999999999999887777777788888888899999999998888888888877665
No 48
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=70.68 E-value=12 Score=26.46 Aligned_cols=47 Identities=15% Similarity=0.275 Sum_probs=20.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHH
Q 020328 157 SVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESK 203 (327)
Q Consensus 157 ~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~K 203 (327)
.++.+++++.+.-..++.+..+.+..+.+.-.++..++.-+..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~q 55 (60)
T 3htk_A 9 TLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQ 55 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444444444444444444333
No 49
>3m0a_A TNF receptor-associated factor 2; TRAF2: CIAP2 and the TRAF1: TRAF2: CIAP2 complexes, apoptosi coil, cytoplasm, metal-binding; 2.61A {Homo sapiens} PDB: 3m0d_A 3m06_A
Probab=70.14 E-value=21 Score=25.90 Aligned_cols=58 Identities=17% Similarity=0.238 Sum_probs=41.0
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 151 LSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 151 LsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
|.+++.++..|++...-|...-..+|......++.....-..-+..+..||.|+.+++
T Consensus 3 ~~~~~~~le~k~~~~e~iv~~l~~~v~~~~~~le~~~~q~~~~~~~i~~Le~k~~~l~ 60 (66)
T 3m0a_A 3 LLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLE 60 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHHhHHHHHHHHHHHHH
Confidence 5667777777777766666666667777777777666665556778888888887665
No 50
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=70.09 E-value=33 Score=26.00 Aligned_cols=65 Identities=14% Similarity=0.213 Sum_probs=50.1
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHh
Q 020328 151 LSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITT 215 (327)
Q Consensus 151 LsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn 215 (327)
+..+|+.+-...|...+=......++.+..........|+.+++.-+..||.-++..+..=.-++
T Consensus 4 ikkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~ 68 (81)
T 1ic2_A 4 IKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQ 68 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567777777777777777777778788888888899999999999999998888776644433
No 51
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=69.70 E-value=20 Score=27.71 Aligned_cols=46 Identities=15% Similarity=0.167 Sum_probs=26.2
Q ss_pred HHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHH
Q 020328 176 VTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKL 221 (327)
Q Consensus 176 V~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~L 221 (327)
|..++.=--.||.+++.=+.++..|+.|+++...+=..+|.-+..|
T Consensus 38 v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl~~~~~rl~~l 83 (87)
T 1sfc_D 38 IGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 83 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 3333333344555556666666666666666666666666555443
No 52
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=69.23 E-value=41 Score=26.68 Aligned_cols=81 Identities=15% Similarity=0.164 Sum_probs=55.7
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHHHH
Q 020328 147 AQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCDRAR 226 (327)
Q Consensus 147 aKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~f~~ 226 (327)
=+....-|.+.+..++.+..+-.....+||..++..+..+..|++..+.-+...-.|+..-+..-.-+-..|..|-.-+.
T Consensus 17 e~e~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~Rriq 96 (101)
T 3u1c_A 17 DKENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666677777777777777888888888888888888888877777767776666555555556666654443
Q ss_pred h
Q 020328 227 E 227 (327)
Q Consensus 227 ~ 227 (327)
-
T Consensus 97 l 97 (101)
T 3u1c_A 97 L 97 (101)
T ss_dssp H
T ss_pred H
Confidence 3
No 53
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=68.96 E-value=39 Score=26.30 Aligned_cols=36 Identities=8% Similarity=0.143 Sum_probs=17.5
Q ss_pred HHHHHHhhhHHHHHHHH---HHHHHHHHhhhhhhhhHHH
Q 020328 129 ACNSVARQLEDVYSSIS---AAQRQLSSKITSVDRDVNK 164 (327)
Q Consensus 129 Av~svtKqLeqVs~sLa---aaKrHLsqRId~vD~kLDe 164 (327)
....+.+.++++.+.|. .-+..+.++|+.+...++.
T Consensus 4 ~~~~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l~~ 42 (112)
T 1l8d_A 4 LLEELETKKTTIEEERNEITQRIGELKNKIGDLKTAIEE 42 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555544443 3344555555555555544
No 54
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=67.96 E-value=33 Score=25.10 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=17.6
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHhhhhhh
Q 020328 129 ACNSVARQLEDVYSSISAAQRQLSSKITSVD 159 (327)
Q Consensus 129 Av~svtKqLeqVs~sLaaaKrHLsqRId~vD 159 (327)
.+..+++++.+..+.|...-..|.++|+.|.
T Consensus 13 ~l~~~A~~~~~~~~~i~~~l~~L~~~~~~L~ 43 (93)
T 4ioe_A 13 ELERIAGNFKNAAGEAQSQINRLEGDINSLE 43 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555556665566666666653
No 55
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=67.61 E-value=28 Score=26.87 Aligned_cols=59 Identities=7% Similarity=0.144 Sum_probs=39.5
Q ss_pred HHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 150 QLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 150 HLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
+.-+.++.|...+..+++++..|-+||..=-.=|..|..+++.....+..--.|+..+-
T Consensus 26 eqD~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl~~~~~rl~~ll 84 (87)
T 1sfc_D 26 EMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 84 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 44445555566666666777777777777777777777777777766666666666553
No 56
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=67.41 E-value=11 Score=28.67 Aligned_cols=58 Identities=14% Similarity=0.165 Sum_probs=45.3
Q ss_pred HHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 020328 152 SSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEG 209 (327)
Q Consensus 152 sqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~ 209 (327)
-..++.|..++..+++++..|.+||.+=-.=|..+..|++.....+..--.|+..+-.
T Consensus 18 D~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L~~~~~r~~~~~~ 75 (82)
T 2nps_D 18 DEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSH 75 (82)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777777788888888888888888888888888888888777777777776644
No 57
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=65.80 E-value=8.7 Score=32.01 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=44.5
Q ss_pred HHhhhheeeEEecccCCCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Q 020328 99 VIVAVGYGYVWWKGWKLPDMMFATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTI 178 (327)
Q Consensus 99 ~iGavGYgYmwWKGws~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~ 178 (327)
++.-+|.||+=.+- +..|++.|..||+.++..++...+..+.++++++.
T Consensus 82 V~v~lG~g~~vE~~-------------------------------~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~ 130 (151)
T 2zdi_C 82 AIVSVGSGYAVERS-------------------------------IDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGE 130 (151)
T ss_dssp EEEEEETTEEEEEE-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCeEEEec-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45568999998873 47888899999999999998888888888888776
Q ss_pred hhcchhhh
Q 020328 179 LRGRSKLI 186 (327)
Q Consensus 179 v~~dls~i 186 (327)
+...+.++
T Consensus 131 ~~~~l~~l 138 (151)
T 2zdi_C 131 VARKAQEV 138 (151)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66654433
No 58
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=65.66 E-value=37 Score=24.83 Aligned_cols=31 Identities=23% Similarity=0.434 Sum_probs=24.0
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Q 020328 135 RQLEDVYSSISAAQRQLSSKITSVDRDVNKI 165 (327)
Q Consensus 135 KqLeqVs~sLaaaKrHLsqRId~vD~kLDeq 165 (327)
.+|+++...+..+...|.+.+++|...++..
T Consensus 12 e~l~~~A~~~~~~~~~i~~~l~~L~~~~~~L 42 (93)
T 4ioe_A 12 EELERIAGNFKNAAGEAQSQINRLEGDINSL 42 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677788888888888888888877777765
No 59
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=64.72 E-value=4.4 Score=28.65 Aligned_cols=23 Identities=17% Similarity=0.394 Sum_probs=17.6
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHH
Q 020328 147 AQRQLSSKITSVDRDVNKIVEIS 169 (327)
Q Consensus 147 aKrHLsqRId~vD~kLDeq~eis 169 (327)
+|.+|-|.|++||..++...+=+
T Consensus 3 tk~~l~qkI~kVdrEI~Kte~kI 25 (42)
T 2l5g_B 3 SKEELIQNMDRVDREITMVEQQI 25 (42)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999998877664433
No 60
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=64.29 E-value=15 Score=26.69 Aligned_cols=48 Identities=17% Similarity=0.206 Sum_probs=33.1
Q ss_pred HhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhh
Q 020328 134 ARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKL 185 (327)
Q Consensus 134 tKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ 185 (327)
-.+|+.++..+...| +++.. ....+++|.++...+.++|......+..
T Consensus 8 D~~Ld~L~~~v~~lk-~~a~~---Ig~El~~Qn~lLd~l~~~~d~~~~~l~~ 55 (65)
T 1gl2_D 8 DAGLDALSSIISRQK-QMGQE---IGNELDEQNEIIDDLANLVENTDEKLRT 55 (65)
T ss_dssp CHHHHHHHHHHHHHH-HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHH---HhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357788887776654 45554 4578888988888888887666655443
No 61
>1jth_B Syntaxin 1A; coiled-coil, polar layer, endocytosis-exocytosis complex; 2.00A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1hvv_A* 1urq_B
Probab=63.42 E-value=38 Score=25.26 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=39.2
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhh----hhhHhHHHHHHHHHHHhhcc
Q 020328 173 QEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGK----QDITTLGVKKLCDRARELEN 230 (327)
Q Consensus 173 k~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k----Qd~Tn~GV~~LC~f~~~~~~ 230 (327)
.+++..+..++..++.=+..+..+|..=+.-|++||++ ++.+..|...|-.+..--+.
T Consensus 9 ~~ei~~ie~~i~eL~~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~kA~~~q~~ 70 (77)
T 1jth_B 9 HSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSK 70 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555666666666666777777787778888888877 66677788888776653333
No 62
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=62.78 E-value=42 Score=24.55 Aligned_cols=30 Identities=13% Similarity=0.249 Sum_probs=15.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Q 020328 136 QLEDVYSSISAAQRQLSSKITSVDRDVNKI 165 (327)
Q Consensus 136 qLeqVs~sLaaaKrHLsqRId~vD~kLDeq 165 (327)
+|+++...+..+..+|.+.+++|+..++..
T Consensus 13 ~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L 42 (99)
T 3zbh_A 13 ELRGVARQYNVESSNVTELIARLDQMSHTL 42 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555555555443
No 63
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=62.42 E-value=13 Score=26.44 Aligned_cols=36 Identities=8% Similarity=0.345 Sum_probs=25.3
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 020328 126 LSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRD 161 (327)
Q Consensus 126 msnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~k 161 (327)
|.+.+..+-..+-.+-....++...|.|||..+..+
T Consensus 10 Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~~ 45 (46)
T 3swy_A 10 LGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQ 45 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444555555555555555678999999999998765
No 64
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=61.96 E-value=83 Score=27.76 Aligned_cols=78 Identities=18% Similarity=0.251 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh---hhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHH
Q 020328 124 RSLSDACNSVARQLEDVYSSISAAQRQLSSK---ITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTL 200 (327)
Q Consensus 124 RnmsnAv~svtKqLeqVs~sLaaaKrHLsqR---Id~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~L 200 (327)
+.+.++...+-+.+-+++..|..=|+-.+++ |..+..+ ......|+..++...+..-.|...++..+..|
T Consensus 58 ~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~r-------i~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~l 130 (168)
T 3o0z_A 58 RILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQAR-------ITSLQEEVKHLKHNLEKVEGERKEAQDMLNHS 130 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555555544322222 2222111 22334555555666666666777777777777
Q ss_pred HHHHHHhh
Q 020328 201 ESKLIEIE 208 (327)
Q Consensus 201 e~Ki~~ie 208 (327)
|..-..+|
T Consensus 131 EKe~a~~e 138 (168)
T 3o0z_A 131 EKEKNNLE 138 (168)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 76666555
No 65
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=61.70 E-value=14 Score=29.64 Aligned_cols=66 Identities=14% Similarity=0.162 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHH-------HHHHHHhhhh----hhhHhHHHHHHHHHHHhhccCC
Q 020328 167 EISQATQEEVTILRGRSKLIGDEFQSVRDIVQTL-------ESKLIEIEGK----QDITTLGVKKLCDRARELENGR 232 (327)
Q Consensus 167 eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~L-------e~Ki~~ie~k----Qd~Tn~GV~~LC~f~~~~~~~~ 232 (327)
..+++.-+++.+=+.++.+|..++..+++++..| +.-|++||++ ++....|...|-.+.+--++++
T Consensus 7 ~~a~~~l~~i~eR~~eI~~Ie~~I~eL~~iF~dla~lV~eQge~Id~Ie~nv~~a~~~v~~g~~eL~kA~~yqk~~r 83 (109)
T 3hd7_B 7 SISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKAR 83 (109)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
No 66
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=61.49 E-value=57 Score=32.30 Aligned_cols=90 Identities=12% Similarity=0.156 Sum_probs=38.5
Q ss_pred CchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH-------hhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhh
Q 020328 116 PDMMFATRRSLSDACNSVARQLEDVYSSISAAQRQLSS-------KITSVDRDVNKIVEISQATQEEVTILRGRSKLIGD 188 (327)
Q Consensus 116 SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsq-------RId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~ 188 (327)
.|+|.==.++..+-+..|-..|++|+.+=+.|+..+.. |=....+..|-..+-++.+.+|+.....-+.+...
T Consensus 26 ~d~L~kye~~V~~~l~~L~~~l~~isn~Ts~~~~~v~~ik~~~~~~q~~~~~n~~~~~q~Skkml~~~~~~~~~~~~~~~ 105 (411)
T 3ghg_C 26 ADFLSTYQTKVDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMIDAATLKSRKMLEEIMKYEASILTHDS 105 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccchhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 34444444555555555555555554444444332221 11112222333444444444444444444444444
Q ss_pred HHHHHHHHHHHHHHHHH
Q 020328 189 EFQSVRDIVQTLESKLI 205 (327)
Q Consensus 189 Dv~~v~~~V~~Le~Ki~ 205 (327)
.|..++.++...+.||.
T Consensus 106 ~i~~l~~~~~~~~~~i~ 122 (411)
T 3ghg_C 106 SIRYLQEIYNSNNQKIV 122 (411)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444444443
No 67
>2nps_B Syntaxin 13, vesicle-associated membrane protein 4; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Rattus norvegicus}
Probab=60.74 E-value=36 Score=25.06 Aligned_cols=54 Identities=11% Similarity=0.076 Sum_probs=39.4
Q ss_pred HHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhh----hhhHhHHHHHHHHHHHh
Q 020328 174 EEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGK----QDITTLGVKKLCDRARE 227 (327)
Q Consensus 174 ~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k----Qd~Tn~GV~~LC~f~~~ 227 (327)
+++..+..++..++.=+..+..+|..=+.-|++||++ ++.+..|...|-.+..-
T Consensus 6 ~ei~~ie~~i~eL~~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~eL~kA~~~ 63 (71)
T 2nps_B 6 TAIQQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERASDQLQRAAYY 63 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666666777888888888888999999887 56666777777665543
No 68
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=60.04 E-value=31 Score=24.33 Aligned_cols=47 Identities=15% Similarity=0.236 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcc
Q 020328 136 QLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGR 182 (327)
Q Consensus 136 qLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~d 182 (327)
.++.-......-.+++..+++....++++..+-...+++++.+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~q 55 (60)
T 3htk_A 9 TLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQ 55 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445556666666666666666666656666665555443
No 69
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=59.95 E-value=96 Score=27.70 Aligned_cols=38 Identities=8% Similarity=0.105 Sum_probs=18.0
Q ss_pred HhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHH
Q 020328 153 SKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEF 190 (327)
Q Consensus 153 qRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv 190 (327)
.||+.+.+++.+..+-.+..+.++.++...++.+..++
T Consensus 104 ~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l 141 (256)
T 3na7_A 104 ERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLA 141 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444444444444
No 70
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=58.84 E-value=24 Score=27.51 Aligned_cols=39 Identities=10% Similarity=0.326 Sum_probs=27.4
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHH
Q 020328 126 LSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNK 164 (327)
Q Consensus 126 msnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDe 164 (327)
|.+.+..+-..+-.+-....+++.+|.|||.+|..++-.
T Consensus 12 LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~~~ 50 (74)
T 3swf_A 12 MESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKP 50 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444455555555555555577999999999999887765
No 71
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=58.54 E-value=51 Score=24.10 Aligned_cols=76 Identities=12% Similarity=0.151 Sum_probs=40.9
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhH-----HHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHH
Q 020328 129 ACNSVARQLEDVYSSISAAQRQLSSKITSVDRDV-----NKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESK 203 (327)
Q Consensus 129 Av~svtKqLeqVs~sLaaaKrHLsqRId~vD~kL-----Deq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~K 203 (327)
.+..+++++.+..+.|...-..|.+.|+.|...= +...+.-...+..+..+..-|..|...+.......+.-|.+
T Consensus 13 ~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L~~~W~G~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~~~~~d~~ 92 (99)
T 3zbh_A 13 ELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSATILEDTDQQ 92 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666777777777777777777777763321 22233333344444444444555555555555444444444
Q ss_pred H
Q 020328 204 L 204 (327)
Q Consensus 204 i 204 (327)
+
T Consensus 93 ~ 93 (99)
T 3zbh_A 93 I 93 (99)
T ss_dssp H
T ss_pred H
Confidence 3
No 72
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=58.19 E-value=58 Score=35.52 Aligned_cols=19 Identities=11% Similarity=0.340 Sum_probs=7.9
Q ss_pred HHhhhhhhhhHHHHHHHHH
Q 020328 152 SSKITSVDRDVNKIVEISQ 170 (327)
Q Consensus 152 sqRId~vD~kLDeq~eis~ 170 (327)
..++..++.++++..+-.+
T Consensus 983 ~~~v~~L~~e~~~l~~~~~ 1001 (1080)
T 2dfs_A 983 TNRVLSLQEEIAKLRKELH 1001 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444433333
No 73
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=57.54 E-value=2.2 Score=33.15 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=11.3
Q ss_pred eeeEcCcccceeec
Q 020328 9 TFLVGAGILTSVLA 22 (327)
Q Consensus 9 ~ILvGAG~~GSVl~ 22 (327)
+++||||++|..++
T Consensus 5 V~IIGaGpaGL~aA 18 (336)
T 3kkj_A 5 IAIIGTGIAGLSAA 18 (336)
T ss_dssp EEEECCSHHHHHHH
T ss_pred EEEECcCHHHHHHH
Confidence 68899999987554
No 74
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=57.01 E-value=15 Score=28.29 Aligned_cols=54 Identities=9% Similarity=0.129 Sum_probs=36.8
Q ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 020328 149 RQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEG 209 (327)
Q Consensus 149 rHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~ 209 (327)
..|..||+.|..|+--|....+...+.|+.-+.. |+.++.-+..|-.|+..++.
T Consensus 10 ~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~-------Id~L~~ql~~L~~rl~~~~~ 63 (78)
T 3efg_A 10 QELEARLVELETRLSFQEQALTELSEALADARLT-------GARNAELIRHLLEDLGKVRS 63 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhhh
Confidence 4577899999999888888888888888666655 56666666666677776664
No 75
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=56.91 E-value=1.2e+02 Score=30.06 Aligned_cols=92 Identities=11% Similarity=0.177 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcc------------------hhhhhhHHHHHHHHHHHH
Q 020328 139 DVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGR------------------SKLIGDEFQSVRDIVQTL 200 (327)
Q Consensus 139 qVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~d------------------ls~ig~Dv~~v~~~V~~L 200 (327)
.+.+.|....+.....|+.|...|++....+..+.+=|..++.- .+.+-+++..+..++...
T Consensus 24 gl~d~L~kye~~V~~~l~~L~~~l~~isn~Ts~~~~~v~~ik~~~~~~q~~~~~n~~~~~q~Skkml~~~~~~~~~~~~~ 103 (411)
T 3ghg_C 24 GIADFLSTYQTKVDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMIDAATLKSRKMLEEIMKYEASILTH 103 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhccchhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 35677777788888888888888888877777777766666542 233556666667777777
Q ss_pred HHHHHHhhhhhhhHhHHHHHHHHHHHhhcc
Q 020328 201 ESKLIEIEGKQDITTLGVKKLCDRARELEN 230 (327)
Q Consensus 201 e~Ki~~ie~kQd~Tn~GV~~LC~f~~~~~~ 230 (327)
+..|..++..-+.-+.-|..|-+-+..++.
T Consensus 104 ~~~i~~l~~~~~~~~~~i~~L~~~v~~l~~ 133 (411)
T 3ghg_C 104 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEA 133 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788877777666666677777666666554
No 76
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=56.84 E-value=54 Score=23.86 Aligned_cols=29 Identities=10% Similarity=0.206 Sum_probs=14.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhHHH
Q 020328 136 QLEDVYSSISAAQRQLSSKITSVDRDVNK 164 (327)
Q Consensus 136 qLeqVs~sLaaaKrHLsqRId~vD~kLDe 164 (327)
+|+++...+..+..+|.+.++.|+..++.
T Consensus 10 ~l~~~A~~~~~~~~~l~~~l~~L~~~~~~ 38 (97)
T 2vs0_A 10 EIRAKSQSYGQGSDQIRQILSDLTRAQGE 38 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555444
No 77
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=55.83 E-value=74 Score=25.16 Aligned_cols=52 Identities=12% Similarity=0.210 Sum_probs=22.3
Q ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHH
Q 020328 149 RQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTL 200 (327)
Q Consensus 149 rHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~L 200 (327)
..|+.||+.+...+|...+--...++...+.....+.--.++.++++-++-|
T Consensus 47 ~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~Rriqll 98 (101)
T 3u1c_A 47 VQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRIQLV 98 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555554444444444333333333333333444444433333
No 78
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=54.98 E-value=68 Score=24.48 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=25.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 020328 135 RQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEI 168 (327)
Q Consensus 135 KqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~ei 168 (327)
-+|++....|..+.++|...|+.|+..++.....
T Consensus 14 ~~l~~~a~~~~~~~~~i~~~l~~L~~~v~~L~~~ 47 (103)
T 4i0x_B 14 DHIEQVTSRARGFKEFVTENLDQLESRAQKLVQS 47 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4566777777777778888888887777777655
No 79
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=54.98 E-value=46 Score=26.06 Aligned_cols=59 Identities=15% Similarity=0.318 Sum_probs=31.8
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 129 ACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 129 Av~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
.|++++..|+.+... -..|..||..+...|++.++=....+.|+ +.+.+.|++||+++.
T Consensus 7 e~e~~~~klq~~E~r----N~~Le~~v~~le~~Le~s~~~q~~~~~El-----------------k~l~e~Ld~KI~eL~ 65 (79)
T 3cvf_A 7 EREETQQKVQDLETR----NAELEHQLRAMERSLEEARAERERARAEV-----------------GRAAQLLDVSLFELS 65 (79)
T ss_dssp ---CTTHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhhHHHHHH
Confidence 344555444433322 23466677777777776666666665555 344456666666664
No 80
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=54.96 E-value=62 Score=23.96 Aligned_cols=7 Identities=0% Similarity=0.496 Sum_probs=2.5
Q ss_pred HHHHHHH
Q 020328 162 VNKIVEI 168 (327)
Q Consensus 162 LDeq~ei 168 (327)
+++..++
T Consensus 64 ~~~~~~~ 70 (98)
T 3gwk_C 64 ITEFAQL 70 (98)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 81
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=54.86 E-value=55 Score=33.26 Aligned_cols=49 Identities=14% Similarity=0.151 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHH
Q 020328 143 SISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQ 191 (327)
Q Consensus 143 sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~ 191 (327)
.+..-=.+|-.||.-++.++|.+..-....|..|...+.++.++..||.
T Consensus 108 ~~~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~ 156 (491)
T 1m1j_A 108 NYGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDID 156 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333345667788889999998877777777777666666666666554
No 82
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=54.46 E-value=1.2e+02 Score=27.09 Aligned_cols=84 Identities=15% Similarity=0.193 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH----HHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhh
Q 020328 137 LEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEE----VTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQD 212 (327)
Q Consensus 137 LeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~e----V~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd 212 (327)
||.==+.+...-++|..++.++...+++.+.=-+..+.| ++.++.++.......+.++.-++.||-+=|.+|.+--
T Consensus 47 LE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R 126 (189)
T 2v71_A 47 LEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKR 126 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 333344455666778888888888888877666666666 7777777777777777777777777777777766655
Q ss_pred hHhHHHHH
Q 020328 213 ITTLGVKK 220 (327)
Q Consensus 213 ~Tn~GV~~ 220 (327)
++..-+..
T Consensus 127 ~~~~SleD 134 (189)
T 2v71_A 127 ATIMSLED 134 (189)
T ss_dssp HHHHHHHH
T ss_pred HHHhhHHH
Confidence 55544433
No 83
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=54.43 E-value=43 Score=33.60 Aligned_cols=28 Identities=21% Similarity=0.328 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH
Q 020328 144 ISAAQRQLSSKITSVDRDVNKIVEISQATQE 174 (327)
Q Consensus 144 LaaaKrHLsqRId~vD~kLDeq~eis~~ik~ 174 (327)
+-..+|.+..+++.+..+. ++++++|..
T Consensus 75 ld~~~r~~~~~~~~l~~~r---n~~sk~i~~ 102 (501)
T 1wle_A 75 TWQELRQLREQIRSLEEEK---EAVTEAVRA 102 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 4456677777776666544 455555553
No 84
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=54.33 E-value=23 Score=25.42 Aligned_cols=41 Identities=12% Similarity=0.305 Sum_probs=26.7
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Q 020328 125 SLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKI 165 (327)
Q Consensus 125 nmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq 165 (327)
|..+-.+.|-+=|+|+++-....-..+..|||.+..++|+.
T Consensus 3 ~~~dLt~~vq~LL~qmq~kFq~mS~~I~~riDdM~~RIDdL 43 (48)
T 3ci9_A 3 TVQDLTSVVQTLLQQMQDKFQTISDQIIGRIDDMSSRIDDL 43 (48)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 34444455555566667777777777777777777777754
No 85
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=53.77 E-value=60 Score=23.42 Aligned_cols=47 Identities=13% Similarity=0.171 Sum_probs=31.2
Q ss_pred HhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchh
Q 020328 134 ARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSK 184 (327)
Q Consensus 134 tKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls 184 (327)
-.+|++++..|...| +++.. ....+++|.++...+.++|..+...+.
T Consensus 9 D~~Ld~L~~~v~~lk-~la~~---ig~El~~Qn~~Ld~l~~~~d~~~~~l~ 55 (66)
T 1n7s_D 9 DENLEQVSGIIGNLR-HMALD---MGNEIDTQNRQIDRIMEKADSNKTRID 55 (66)
T ss_dssp HHHHHHHHHHHHHHH-HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHH---HHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 456777777776554 44444 467888888888887777765555433
No 86
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=53.08 E-value=70 Score=27.19 Aligned_cols=67 Identities=13% Similarity=0.204 Sum_probs=52.5
Q ss_pred HhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHH
Q 020328 153 SKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVK 219 (327)
Q Consensus 153 qRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~ 219 (327)
.||+.+..+|.+.+.+.+..-....++...+.-+..|++.--.-+...|.|+..++..=.....-+.
T Consensus 52 Er~~~lE~qLkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~nlK 118 (147)
T 2b9c_A 52 EKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLK 118 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777777777888888878888899999999999999888889999999888876554443333
No 87
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=52.90 E-value=79 Score=24.88 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=28.1
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHH
Q 020328 154 KITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIE 206 (327)
Q Consensus 154 RId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ 206 (327)
.|+.+..|-....+=...++.....+.....+...+....+.-+++|=+||+.
T Consensus 28 EieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk~e~ 80 (81)
T 2jee_A 28 EIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEE 80 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 33333333333333333333334445556667777777777777777666653
No 88
>1sfc_B Protein (syntaxin 1A), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1l4a_B
Probab=52.49 E-value=74 Score=24.11 Aligned_cols=55 Identities=16% Similarity=0.180 Sum_probs=38.4
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhh----hhhHhHHHHHHHHHHH
Q 020328 172 TQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGK----QDITTLGVKKLCDRAR 226 (327)
Q Consensus 172 ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k----Qd~Tn~GV~~LC~f~~ 226 (327)
=.+++..+..++..++.=+..+..+|..=+.-|++||++ ++.+..|...|..+..
T Consensus 19 R~~ei~~ie~~i~eL~~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~eL~kA~~ 77 (83)
T 1sfc_B 19 RHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335566666666666666777777788888889999887 5566677777766553
No 89
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=52.47 E-value=56 Score=25.50 Aligned_cols=26 Identities=19% Similarity=0.265 Sum_probs=15.0
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHH
Q 020328 171 ATQEEVTILRGRSKLIGDEFQSVRDI 196 (327)
Q Consensus 171 ~ik~eV~~v~~dls~ig~Dv~~v~~~ 196 (327)
..+.||..+|+.++....+++.+++-
T Consensus 31 ~Lq~Ev~~LRGqiE~~~~~l~ql~~r 56 (83)
T 2xdj_A 31 DNQSDIDSLRGQIQENQYQLNQVVER 56 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34556666666666666666655543
No 90
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=52.14 E-value=75 Score=26.14 Aligned_cols=30 Identities=7% Similarity=0.185 Sum_probs=15.7
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHhhhh
Q 020328 181 GRSKLIGDEFQSVRDIVQTLESKLIEIEGK 210 (327)
Q Consensus 181 ~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k 210 (327)
..+..+...++.++.+...|+.+|+..+..
T Consensus 88 ~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~ 117 (142)
T 3gp4_A 88 KQRIELKNRIDVMQEALDRLDFKIDNYDTH 117 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445555555555555555555443
No 91
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=51.96 E-value=1.8e+02 Score=28.52 Aligned_cols=49 Identities=16% Similarity=0.250 Sum_probs=28.3
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHHHHhhcc
Q 020328 182 RSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCDRARELEN 230 (327)
Q Consensus 182 dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~f~~~~~~ 230 (327)
+.+.+.+++..+..++..-|..|..++..-+-.+.-|..|-+-+..+++
T Consensus 85 ~skkml~~~~~~e~~~~~~~~~i~~l~~~~~~~~~~i~~l~~~i~~l~~ 133 (409)
T 1m1j_C 85 KSKKIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQLES 133 (409)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3444555555555566666666666665544455666666665555554
No 92
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=51.94 E-value=1e+02 Score=25.59 Aligned_cols=96 Identities=14% Similarity=0.272 Sum_probs=59.3
Q ss_pred eEEecccCCCchhhhhhhhHHHHHHHHHhhhHHHH-----------HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Q 020328 107 YVWWKGWKLPDMMFATRRSLSDACNSVARQLEDVY-----------SSISAAQRQLSSKITSVDRDVNKIVEISQATQEE 175 (327)
Q Consensus 107 YmwWKGws~SDlMfVTKRnmsnAv~svtKqLeqVs-----------~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~e 175 (327)
-.+.-+-+.-|=+|+-|.-..++++.+-.-..+-. +.+..++++|..-|+.+.+.|++..+...-+..+
T Consensus 17 ~~~~~~ms~~DPF~~Vk~EVq~sl~~l~~l~~~w~~l~~~~~~~s~~E~~~~~~EL~~~l~sie~dLeDLe~sI~ivE~n 96 (130)
T 4dnd_A 17 NLYFQSMSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEAN 96 (130)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeeecCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34445667779999999888888877766655521 2567888888988988888888887776655433
Q ss_pred HHHhhcchhhhh---hHHHHHHHHHHHHHHHHHHhhh
Q 020328 176 VTILRGRSKLIG---DEFQSVRDIVQTLESKLIEIEG 209 (327)
Q Consensus 176 V~~v~~dls~ig---~Dv~~v~~~V~~Le~Ki~~ie~ 209 (327)
=+.|+ .|+..=++.|..++.+|..|+.
T Consensus 97 -------p~kF~l~~~Ei~~Rr~fV~~~r~~I~~mk~ 126 (130)
T 4dnd_A 97 -------PGKFKLPAGDLQERKVFVERMREAVQEMKD 126 (130)
T ss_dssp -------HHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------HHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23332 2355555667777777776654
No 93
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=51.77 E-value=8.3 Score=24.57 Aligned_cols=23 Identities=26% Similarity=0.494 Sum_probs=16.6
Q ss_pred HHHHHHHHhhcchhhhhhHHHHH
Q 020328 171 ATQEEVTILRGRSKLIGDEFQSV 193 (327)
Q Consensus 171 ~ik~eV~~v~~dls~ig~Dv~~v 193 (327)
+.+|||.++++.+..+.++++.+
T Consensus 4 qlkdevgelkgevralkdevkdl 26 (27)
T 3v86_A 4 QLKDEVGELKGEVRALKDEVKDL 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhHHHHHHHHHhcc
Confidence 56888888888777776666543
No 94
>3zcc_A HAMP, osmolarity sensor protein ENVZ; signaling protein, signal transduction, membrane protein, signalling, chimera; 1.25A {Archaeoglobus fulgidus} PDB: 3zrw_A 3zrv_A 3zrx_A 3zrw_B 2lfr_A 2lfs_A 1joy_A 2l7h_A 2l7i_A 2y20_A 2y21_A 2y0q_A 2y0t_A
Probab=51.71 E-value=62 Score=22.97 Aligned_cols=23 Identities=13% Similarity=0.300 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHhhcchhhhhh
Q 020328 166 VEISQATQEEVTILRGRSKLIGD 188 (327)
Q Consensus 166 ~eis~~ik~eV~~v~~dls~ig~ 188 (327)
..++..+++-++.++.-++.+..
T Consensus 65 ~~~shel~tpl~~i~~~~e~l~~ 87 (114)
T 3zcc_A 65 AGVSHDLRTPLTRIRLATEMMSE 87 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCG
T ss_pred HHhhHHHcChHHHHHHHHHHHHH
Confidence 34455555555555554444433
No 95
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=51.65 E-value=66 Score=24.77 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=24.4
Q ss_pred HHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHH
Q 020328 150 QLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVR 194 (327)
Q Consensus 150 HLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~ 194 (327)
.|..||..+...|++++.=....+.|+.-+.+.+.-=-+|+..++
T Consensus 18 ~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elr 62 (72)
T 3cve_A 18 DLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELR 62 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 466666666666666666666666655555444443333333333
No 96
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=51.25 E-value=75 Score=29.28 Aligned_cols=26 Identities=23% Similarity=0.440 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhHHH
Q 020328 166 VEISQATQEEVTILRGRSKLIGDEFQ 191 (327)
Q Consensus 166 ~eis~~ik~eV~~v~~dls~ig~Dv~ 191 (327)
.+++.+++..|.+.+.++.-.++|++
T Consensus 208 ~~~~~~~~qq~e~f~~~~~p~~e~~~ 233 (273)
T 3s84_A 208 AELGGHLDQQVEEFRRRVEPYGENFN 233 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHH
Confidence 45568888888888888887777764
No 97
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=49.57 E-value=1e+02 Score=26.30 Aligned_cols=70 Identities=10% Similarity=0.119 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH-------HHHHhhcchhhhhhHHHHHHHHHHHHHHHHHH
Q 020328 137 LEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQE-------EVTILRGRSKLIGDEFQSVRDIVQTLESKLIE 206 (327)
Q Consensus 137 LeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~-------eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ 206 (327)
.+.++..+..|-..|..-..+|.+.+++...+++.+++ ...+++..++....-.+.|..+-..|+..|..
T Consensus 70 ~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~s 146 (152)
T 4fla_A 70 AERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQS 146 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34444455555555666666666666666655554442 33344444444444455555555555555543
No 98
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=48.64 E-value=1.1e+02 Score=24.77 Aligned_cols=73 Identities=10% Similarity=0.145 Sum_probs=54.1
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHH
Q 020328 130 CNSVARQLEDVYSSISAAQRQLSSKITSVD-RDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLES 202 (327)
Q Consensus 130 v~svtKqLeqVs~sLaaaKrHLsqRId~vD-~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~ 202 (327)
+...+++|++.-+.|...=..|..+.++|+ +.=++.....+..++=+..++.-.+.....|.-++..++-||.
T Consensus 11 lr~Fa~~L~~F~d~Lq~~~~~L~~~f~~L~sWqDqkr~kFee~fe~l~s~l~~f~e~a~e~vp~L~~~i~vle~ 84 (94)
T 3fx7_A 11 VREFVGHLERFKELLREEVNSLSNHFHNLESWRDARRDKFSEVLDNLKSTFNEFDEAAQEQIAWLKERIRVLEE 84 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHhhHHHHHHHHHHHHHHHHHHHHHHhhHHHhHHHHHHHHHhHH
Confidence 456789999999999999999999999998 4445555666666666666666666666666666666555554
No 99
>1qu7_A Methyl-accepting chemotaxis protein I; serine, four helical-bundle, signaling protein; 2.60A {Escherichia coli} SCOP: h.4.5.1
Probab=48.60 E-value=1.4e+02 Score=26.29 Aligned_cols=15 Identities=0% Similarity=0.224 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHhcC
Q 020328 61 LLAEVSSVQQELSHV 75 (327)
Q Consensus 61 L~aQV~~LaqElr~L 75 (327)
+..-|+..+.+-..|
T Consensus 71 i~~~I~~IA~QTNLL 85 (227)
T 1qu7_A 71 IISVIDGIAFQTNIL 85 (227)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333444444444443
No 100
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=48.39 E-value=76 Score=24.80 Aligned_cols=52 Identities=13% Similarity=0.229 Sum_probs=43.5
Q ss_pred hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH
Q 020328 123 RRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQE 174 (327)
Q Consensus 123 KRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~ 174 (327)
...|..=|.++-.+|++-...=...|.+|.+=++.+|-|+++..|+-..+..
T Consensus 22 N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgLak 73 (79)
T 3cvf_A 22 NAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGLAR 73 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4567778888888888888888888999999999999999998877666543
No 101
>3fav_A ESAT-6-like protein ESXB; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_A
Probab=47.71 E-value=72 Score=23.93 Aligned_cols=26 Identities=15% Similarity=0.249 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhH
Q 020328 137 LEDVYSSISAAQRQLSSKITSVDRDV 162 (327)
Q Consensus 137 LeqVs~sLaaaKrHLsqRId~vD~kL 162 (327)
|++....+.....+|.+.|+.|+..+
T Consensus 12 l~~~A~~~~~~~~~l~~~l~~l~~~~ 37 (101)
T 3fav_A 12 LAQEAGNFERISGDLKTQIDQVESTA 37 (101)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555555555555554444
No 102
>3fav_B ESAT-6, 6 kDa early secretory antigenic target; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_B
Probab=47.68 E-value=53 Score=24.14 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHHH
Q 020328 137 LEDVYSSISAAQRQLSSKITSVDRDVNK 164 (327)
Q Consensus 137 LeqVs~sLaaaKrHLsqRId~vD~kLDe 164 (327)
|++....|....++|.+.|+.|+..++.
T Consensus 10 l~~~a~~~~~~~~~i~~~l~~l~~~v~~ 37 (94)
T 3fav_B 10 IEAAASAIQGNVTSIHSLLDEGKQSLTK 37 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444443
No 103
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=47.23 E-value=1.2e+02 Score=26.33 Aligned_cols=23 Identities=4% Similarity=-0.071 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q 020328 189 EFQSVRDIVQTLESKLIEIEGKQ 211 (327)
Q Consensus 189 Dv~~v~~~V~~Le~Ki~~ie~kQ 211 (327)
.++.+++-...|--.+..+|.+-
T Consensus 97 ~~e~l~DEl~aLqlq~n~lE~kl 119 (152)
T 3a7p_A 97 NTERLNAALISGTIENNVLQQKL 119 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444445555543
No 104
>3m0d_C TNF receptor-associated factor 1; trimeric helix coiled coiled, acetylation, alternative splic apoptosis, coiled coil, cytoplasm; 2.80A {Homo sapiens}
Probab=47.08 E-value=71 Score=23.46 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=20.8
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 173 QEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 173 k~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
.++|.....-++.+...-..=++.+..||.|+.+.+
T Consensus 26 ~~eve~~~~~lea~~rq~~~d~~~Ie~Le~kv~~l~ 61 (65)
T 3m0d_C 26 NKEVEASHLALATSIHQSQLDRERILSLEQRVVELQ 61 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 344555555555443333333777888888877665
No 105
>3b5n_D Protein transport protein SEC9; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae}
Probab=46.97 E-value=72 Score=23.52 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=17.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhH
Q 020328 185 LIGDEFQSVRDIVQTLESKLIEIEGKQDITTL 216 (327)
Q Consensus 185 ~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~ 216 (327)
.+|.++++=+..+..++.|.+.+..+=..++.
T Consensus 28 ~mg~Eid~QN~~ldrI~~k~d~~d~ri~~~~~ 59 (64)
T 3b5n_D 28 TTGKELDSQQKRLNNIEESTDDLDINLHMNTN 59 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555565566666666665555444443
No 106
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=46.96 E-value=1.2e+02 Score=24.98 Aligned_cols=69 Identities=10% Similarity=0.188 Sum_probs=39.0
Q ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHH
Q 020328 124 RSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDI 196 (327)
Q Consensus 124 RnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~ 196 (327)
|.|...++.+..-+|+.-+-+...++.-..-|..|.+.+++..+.-...+ .--++|++-.+|++-=..+
T Consensus 6 rdL~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~----~~iReLEq~NDDLER~~R~ 74 (111)
T 2v66_B 6 RDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLH----KYVRELEQANDDLERAKRA 74 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhchHHHHHHHH
Confidence 34555566666666666666666666666666666666665443333333 3335566666666554443
No 107
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=46.91 E-value=72 Score=26.21 Aligned_cols=59 Identities=3% Similarity=-0.013 Sum_probs=44.5
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHH
Q 020328 147 AQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLI 205 (327)
Q Consensus 147 aKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~ 205 (327)
=|--|.=.||.|-++|+++.|.-.+++.|-.+-..+++........++.-+..|...|.
T Consensus 24 EKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~ 82 (103)
T 4h22_A 24 EKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALK 82 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778999999999999999999988888777766666666666655555555443
No 108
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=46.21 E-value=61 Score=31.46 Aligned_cols=65 Identities=9% Similarity=0.142 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHH
Q 020328 144 ISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKL 221 (327)
Q Consensus 144 LaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~L 221 (327)
+-..+|.+..+++.+..+ .++++++|.. . -+.|.+.+..-+..|..+|..+|....-...-+..+
T Consensus 33 ~~~~~r~~~~~~~~l~~~---~n~~sk~i~~---~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (421)
T 1ses_A 33 LDREVQELKKRLQEVQTE---RNQVAKRVPK---A-------PPEEKEALIARGKALGEEAKRLEEALREKEARLEAL 97 (421)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHSSS---S-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHh---h-------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555555555555443 3445555542 1 112333444444444444444444444433444433
No 109
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=46.14 E-value=53 Score=25.38 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=30.6
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHH---hhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 020328 130 CNSVARQLEDVYSSISAAQRQLSS---KITSVDRDVNKIVEISQATQEEVTILR 180 (327)
Q Consensus 130 v~svtKqLeqVs~sLaaaKrHLsq---RId~vD~kLDeq~eis~~ik~eV~~v~ 180 (327)
.++|++ +.++.++|...-.+|.+ ||+.++..|++-.+..+..+.+....+
T Consensus 15 ~~~mgt-i~eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfr 67 (72)
T 3nmd_A 15 IEGRGS-LRDLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDKYR 67 (72)
T ss_dssp ----CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345555 77777887776655544 577777777777766666666654443
No 110
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=45.66 E-value=36 Score=26.39 Aligned_cols=15 Identities=27% Similarity=0.397 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHhcC
Q 020328 61 LLAEVSSVQQELSHV 75 (327)
Q Consensus 61 L~aQV~~LaqElr~L 75 (327)
|..|+..|..+++.+
T Consensus 25 l~~q~~~l~~~~~e~ 39 (117)
T 2zqm_A 25 VVQQKQKVQLELTEA 39 (117)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666666666665
No 111
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=45.10 E-value=39 Score=36.76 Aligned_cols=24 Identities=13% Similarity=0.242 Sum_probs=12.8
Q ss_pred CCCCcchhhhhhhhHHHHHHhhhc
Q 020328 24 EGRLSSVSDAVGGTLKIVSKLIKQ 47 (327)
Q Consensus 24 nGkLsdv~~~lsgalk~l~K~lk~ 47 (327)
.|+.+-+...+..-|..|++.|..
T Consensus 652 ~~~~~tv~~~f~~~l~~L~~~l~~ 675 (1184)
T 1i84_S 652 KGMFRTVGQLYKEQLTKLMTTLRN 675 (1184)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHh
Confidence 445566666666666666666543
No 112
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=45.05 E-value=65 Score=24.96 Aligned_cols=38 Identities=24% Similarity=0.223 Sum_probs=23.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHH
Q 020328 184 KLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKL 221 (327)
Q Consensus 184 s~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~L 221 (327)
..||.+++.=+.++..++.|+++...+-..+|.-+..|
T Consensus 47 ~~mg~Eld~Qn~~LD~i~~~~D~~~~rl~~~n~r~~kl 84 (87)
T 1l4a_D 47 IDMGNEIGSQNRQVDRIQQKAESNESRIDEANKKATKL 84 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666667777777777777666666555443
No 113
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=44.93 E-value=1.2e+02 Score=24.50 Aligned_cols=72 Identities=8% Similarity=0.099 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020328 142 SSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDI 213 (327)
Q Consensus 142 ~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~ 213 (327)
+.+..-|..|--.|+++-.-+|+.+.=-+.=...=..+..|+..+..|++...-.-..||.|+..+..-=+|
T Consensus 30 d~~~~e~a~l~leldn~~~~~edfk~KyE~E~~~r~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~F 101 (119)
T 3ol1_A 30 DQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAF 101 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445666666666666665555321111111123345566677777887777777899999888665443
No 114
>1n7s_B Syntaxin 1A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_B 3rk3_B 3rl0_B 1kil_B
Probab=44.92 E-value=87 Score=22.76 Aligned_cols=50 Identities=16% Similarity=0.168 Sum_probs=33.4
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhh----hHhHHHHHHH
Q 020328 173 QEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQD----ITTLGVKKLC 222 (327)
Q Consensus 173 k~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd----~Tn~GV~~LC 222 (327)
.+++..+..++..++.=+..+..+|..=+..|++||++-+ .+..|...|-
T Consensus 11 ~~ei~~Ie~~i~eL~~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~ 64 (68)
T 1n7s_B 11 HSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTK 64 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666666677777778888888899988744 4445555443
No 115
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=44.54 E-value=65 Score=31.70 Aligned_cols=63 Identities=11% Similarity=0.107 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhh
Q 020328 144 ISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGK 210 (327)
Q Consensus 144 LaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k 210 (327)
|-..+|.+..+++.+..+ .++++++|..- ..-.++.+.+..++..+..-+..||.++..++.+
T Consensus 36 l~~~~r~~~~~~~~l~~~---~n~~sk~i~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 98 (455)
T 2dq0_A 36 LDTEWRTKLKEINRLRHE---RNKIAVEIGKR-RKKGEPVDELLAKSREIVKRIGELENEVEELKKK 98 (455)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHHHHH-HTSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHh-hcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444566666666666554 44556665531 1112344444445555555555555555555443
No 116
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=44.24 E-value=1.1e+02 Score=23.72 Aligned_cols=22 Identities=9% Similarity=0.232 Sum_probs=9.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhh
Q 020328 137 LEDVYSSISAAQRQLSSKITSV 158 (327)
Q Consensus 137 LeqVs~sLaaaKrHLsqRId~v 158 (327)
|.++.+.|..+|.-+..-||.+
T Consensus 7 l~~vq~ev~evk~iM~~NI~kv 28 (91)
T 3hd7_A 7 LQQTQAQVDEVVDIMRVNVDKV 28 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444433
No 117
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=43.97 E-value=54 Score=25.39 Aligned_cols=59 Identities=8% Similarity=0.154 Sum_probs=35.9
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHH
Q 020328 148 QRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIE 206 (327)
Q Consensus 148 KrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ 206 (327)
.++.-+-++.|...+..++.++..|.+|+..=-.=|..|..+++.+..-+..--.|+..
T Consensus 25 e~eqD~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl~~~n~r~~k 83 (87)
T 1l4a_D 25 EDDMENNMKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRIDEANKKATK 83 (87)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666666666666777777777666666666666666666555555445444
No 118
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=43.94 E-value=47 Score=24.90 Aligned_cols=61 Identities=11% Similarity=0.145 Sum_probs=40.3
Q ss_pred HHHHhhhhhhhhHHHHHHHHHHHH--------HHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhh
Q 020328 150 QLSSKITSVDRDVNKIVEISQATQ--------EEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGK 210 (327)
Q Consensus 150 HLsqRId~vD~kLDeq~eis~~ik--------~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k 210 (327)
++..++..++=.|++.+++...-. +-...++..+..+...++.++.+...|+.++...+..
T Consensus 7 ~~I~~lr~lGfsL~eIk~~l~~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~~~~~~~~ 75 (99)
T 1q08_A 7 KFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGT 75 (99)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHCGGGCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 455666677777888777765421 1234455566677777777777777777777777654
No 119
>3mts_A Histone-lysine N-methyltransferase SUV39H1; histone methyltransferase, histone-lysine N-methyltransferas SUV39H1, histone H3, TRI-methylation; 2.20A {Homo sapiens}
Probab=43.89 E-value=17 Score=26.82 Aligned_cols=42 Identities=17% Similarity=0.355 Sum_probs=26.9
Q ss_pred eeeEEecccCCCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHH
Q 020328 105 YGYVWWKGWKLPDMMFATRRSLSDACNSVARQLEDVYSSISAA 147 (327)
Q Consensus 105 YgYmwWKGws~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaa 147 (327)
+-++.|||+.-+|-.|-...||. +-.-|..=.......|.+-
T Consensus 17 ~YlVKWkGy~~~~~TWEp~~nl~-c~~li~~f~~~~~~~l~~~ 58 (64)
T 3mts_A 17 YYLVKWRGYPDSESTWEPRQNLK-CVRILKQFHKDLERELLRR 58 (64)
T ss_dssp EEEEEETTSCGGGCEEEEGGGCC-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCcCCcEeEHHHCC-CHHHHHHHHHHHHHHHHhc
Confidence 34689999999999999999994 3333333333334444333
No 120
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=43.44 E-value=1.4e+02 Score=24.70 Aligned_cols=65 Identities=12% Similarity=0.121 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHH
Q 020328 136 QLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTL 200 (327)
Q Consensus 136 qLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~L 200 (327)
+.+++..-+..+++.|+.=.+--++=-|..++-.+..+.+|.++...+.+-...+..++..+...
T Consensus 7 ~~~~lq~~~~ql~~qL~k~~~~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~fsq~ 71 (112)
T 1x79_B 7 QVKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQA 71 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555566666665555444444555666777778888888888777777777777666544
No 121
>2c5k_T Syntaxin TLG1, T-snare affecting A late golgi compartment protein 1; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae} PDB: 2c5j_A 2c5i_T
Probab=43.23 E-value=65 Score=25.45 Aligned_cols=25 Identities=8% Similarity=0.183 Sum_probs=18.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhh
Q 020328 186 IGDEFQSVRDIVQTLESKLIEIEGK 210 (327)
Q Consensus 186 ig~Dv~~v~~~V~~Le~Ki~~ie~k 210 (327)
-..||..=+..|..++.+|..|..+
T Consensus 66 ~~~EI~~Rk~~v~~l~~~i~~lk~~ 90 (95)
T 2c5k_T 66 ENEDVSGREAQVKNIKQQLDALKLR 90 (95)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777778888888888877654
No 122
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=42.65 E-value=75 Score=34.58 Aligned_cols=7 Identities=14% Similarity=-0.140 Sum_probs=2.9
Q ss_pred ccceeec
Q 020328 16 ILTSVLA 22 (327)
Q Consensus 16 ~~GSVl~ 22 (327)
|+|.|.+
T Consensus 585 yag~V~Y 591 (1184)
T 1i84_S 585 YAGKVTY 591 (1184)
T ss_dssp SSCEEEE
T ss_pred CCceEEe
Confidence 3444443
No 123
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=42.49 E-value=2.1e+02 Score=26.41 Aligned_cols=84 Identities=20% Similarity=0.280 Sum_probs=58.6
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHH------HHHHH
Q 020328 127 SDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRD------IVQTL 200 (327)
Q Consensus 127 snAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~------~V~~L 200 (327)
.+++.+|+..|-.+...+..+..++.++++..-..|-.. ..+.+.|...|..=..+.++|..++. -+..|
T Consensus 61 dddl~DIsdklgvLl~e~ge~e~~~a~~~d~yR~~LK~I----R~~E~svqp~R~~R~~l~~~I~kLk~k~P~s~kl~~L 136 (234)
T 3plt_A 61 DDDVSDVTDKLGVLIYELGELQDQFIDKYDQYRVTLKSI----RNIEASVQPSRDRKEKITDEIAHLKYKDPQSTKIPVL 136 (234)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhHHHHHHHHHHHHHHHHhccCCCCchHHHH
Confidence 578888999999999999999988888877666655443 23334466666666666777776663 46678
Q ss_pred HHHHHHhhhhhhhH
Q 020328 201 ESKLIEIEGKQDIT 214 (327)
Q Consensus 201 e~Ki~~ie~kQd~T 214 (327)
|..|.+.|.....+
T Consensus 137 eqELvraEae~lva 150 (234)
T 3plt_A 137 EQELVRAEAESLVA 150 (234)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHH
Confidence 88777666654444
No 124
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=42.43 E-value=95 Score=38.11 Aligned_cols=32 Identities=13% Similarity=0.144 Sum_probs=12.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhcchhhhhhH
Q 020328 158 VDRDVNKIVEISQATQEEVTILRGRSKLIGDE 189 (327)
Q Consensus 158 vD~kLDeq~eis~~ik~eV~~v~~dls~ig~D 189 (327)
+..++++.++--+..++++.++.+.+.....+
T Consensus 2019 ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~ 2050 (3245)
T 3vkg_A 2019 LENAANELKLKQDEIVATITALEKSIATYKEE 2050 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333344444444433333333
No 125
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=42.14 E-value=42 Score=33.74 Aligned_cols=63 Identities=8% Similarity=0.038 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhh
Q 020328 144 ISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGK 210 (327)
Q Consensus 144 LaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k 210 (327)
|-..+|.+..+++.+..+. ++++++|..- ....+|.+.+..++..+..-+..||.++..++.+
T Consensus 38 ld~~~r~~~~~~~~l~~~r---n~~sk~i~~~-k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~ 100 (485)
T 3qne_A 38 EYKEWVKLRFDLDEHNKKL---NSVQKEIGKR-FKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKN 100 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HHHHHHHHHH-HHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHH-hcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677777777666544 4455555431 1223444555555555555555555555555544
No 126
>2c5k_T Syntaxin TLG1, T-snare affecting A late golgi compartment protein 1; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae} PDB: 2c5j_A 2c5i_T
Probab=42.03 E-value=46 Score=26.35 Aligned_cols=53 Identities=17% Similarity=0.234 Sum_probs=35.4
Q ss_pred hhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhc
Q 020328 122 TRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRG 181 (327)
Q Consensus 122 TKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~ 181 (327)
++.-+.+.|..+.-.|+.+.+||...++. =...++.=+.....++.++..++.
T Consensus 37 ~~~El~~~l~el~e~l~DL~~SI~i~e~~-------~~~EI~~Rk~~v~~l~~~i~~lk~ 89 (95)
T 2c5k_T 37 QEEEIQDILKDVEETIVDLDRSIIVMKRD-------ENEDVSGREAQVKNIKQQLDALKL 89 (95)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTS-------TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888999999999999999999987765 223333344444444555444443
No 127
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=41.65 E-value=1.6e+02 Score=27.82 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=18.5
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhc
Q 020328 147 AQRQLSSKITSVDRDVNKIVEISQATQEEVTILRG 181 (327)
Q Consensus 147 aKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~ 181 (327)
.|..|...|+.|-..+.+.++-++.+.+++..-+.
T Consensus 117 d~~~l~~~L~~L~~~i~~~q~~~~~~~~~L~~F~~ 151 (346)
T 2nrj_A 117 DGETLKEGITDLRGEIQQNQKYAQQLIEELTKLRD 151 (346)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666665555554444444444444333
No 128
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=41.26 E-value=98 Score=24.02 Aligned_cols=56 Identities=14% Similarity=0.252 Sum_probs=28.3
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHH
Q 020328 148 QRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESK 203 (327)
Q Consensus 148 KrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~K 203 (327)
-|+|...++.-++.+|..+-|.++.+-....--+=-....++....+.....||.|
T Consensus 5 NKeL~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~q~s~~~l~k~ 60 (74)
T 2q6q_A 5 NKELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKK 60 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhh
Confidence 35666666666666666666666666554333332233334444444444444443
No 129
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=41.26 E-value=34 Score=32.59 Aligned_cols=37 Identities=5% Similarity=0.149 Sum_probs=18.6
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 172 TQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 172 ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
.+.+..+.++.++++..+-+.++...+.++.+|.+..
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (487)
T 3oja_A 433 AIRDWDMYQHKETQLAEENARLKKLNGEADLALASAN 469 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcc
Confidence 4444445555555555555555555555555554443
No 130
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=41.10 E-value=54 Score=23.74 Aligned_cols=10 Identities=10% Similarity=0.292 Sum_probs=4.0
Q ss_pred HHHHhhcchh
Q 020328 175 EVTILRGRSK 184 (327)
Q Consensus 175 eV~~v~~dls 184 (327)
+|..++.|+.
T Consensus 26 dV~al~~~v~ 35 (52)
T 1jcd_A 26 DANAARSDAQ 35 (52)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 131
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=40.98 E-value=1.5e+02 Score=24.40 Aligned_cols=74 Identities=15% Similarity=0.207 Sum_probs=52.8
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHH----HHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHH
Q 020328 148 QRQLSSKITSVDRDVNKIVEISQATQE----EVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKL 221 (327)
Q Consensus 148 KrHLsqRId~vD~kLDeq~eis~~ik~----eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~L 221 (327)
-|.|..+..++.-.+|+.+.=-++-+. .++.++.++......-+.++.-++.||-+=|.+|-..-.|..-+-.+
T Consensus 5 ~rdL~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~ 82 (111)
T 2v66_B 5 NRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDF 82 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHH
Confidence 355666666666666666554444443 36778888888888888999999999999998888877776655443
No 132
>1gl2_B Syntaxin 7; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Mus musculus} SCOP: h.1.15.1
Probab=40.88 E-value=65 Score=23.36 Aligned_cols=43 Identities=12% Similarity=0.180 Sum_probs=30.3
Q ss_pred HHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhH
Q 020328 174 EEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTL 216 (327)
Q Consensus 174 ~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~ 216 (327)
+++..+..++..++.=+..+..+|..=+..|++||++-+-|..
T Consensus 9 ~~i~~ie~~i~eL~~iF~dla~lV~eQge~id~Ie~nv~~a~~ 51 (65)
T 1gl2_B 9 SSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESAEV 51 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555566666666777888888888899999888554443
No 133
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=40.67 E-value=96 Score=25.09 Aligned_cols=20 Identities=15% Similarity=0.564 Sum_probs=10.3
Q ss_pred HHHHHHHHhhhhhhhhHHHH
Q 020328 146 AAQRQLSSKITSVDRDVNKI 165 (327)
Q Consensus 146 aaKrHLsqRId~vD~kLDeq 165 (327)
.++++|...|++++.+++..
T Consensus 47 ~t~~eL~~EI~~L~~eI~~L 66 (96)
T 1t3j_A 47 MTQKHLEEEIARLSKEIDQL 66 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555554443
No 134
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=40.56 E-value=87 Score=24.38 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=21.1
Q ss_pred HHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhh
Q 020328 177 TILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQD 212 (327)
Q Consensus 177 ~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd 212 (327)
.++...++....||..++-.++.+..+|..+...|-
T Consensus 23 ~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQr 58 (83)
T 2xdj_A 23 TQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQK 58 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 344444455555666666666666677776666554
No 135
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=40.48 E-value=1.3e+02 Score=36.91 Aligned_cols=60 Identities=5% Similarity=0.184 Sum_probs=31.7
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHH---HHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchh
Q 020328 125 SLSDACNSVARQLEDVYSSISAAQRQL---SSKITSVDRDVNKIVEISQATQEEVTILRGRSK 184 (327)
Q Consensus 125 nmsnAv~svtKqLeqVs~sLaaaKrHL---sqRId~vD~kLDeq~eis~~ik~eV~~v~~dls 184 (327)
=+.++++..-++|+...+.|++++..| ..+|+.+.++.++...=.+.+++|+...+.+++
T Consensus 2011 Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~ 2073 (3245)
T 3vkg_A 2011 PLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVD 2073 (3245)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555566666666665555443 245555555555554444555555555554433
No 136
>3b5n_B Protein SSO1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=40.37 E-value=1.1e+02 Score=22.42 Aligned_cols=52 Identities=15% Similarity=0.143 Sum_probs=35.2
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhh----hhhHhHHHHHHHHH
Q 020328 173 QEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGK----QDITTLGVKKLCDR 224 (327)
Q Consensus 173 k~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k----Qd~Tn~GV~~LC~f 224 (327)
.+++..+..++..++.=+..+..+|..=+..|++||++ ++.+..|...|-.+
T Consensus 9 ~~ei~~ie~~i~eL~~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~kA 64 (69)
T 3b5n_B 9 HQELLKLEKSMAELTQLFNDMEELVIEQQENVDVIDKNVEDAQLDVEQGVGHTDKA 64 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666666666777777888888888999887 44555566555443
No 137
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=39.74 E-value=90 Score=25.67 Aligned_cols=10 Identities=10% Similarity=0.242 Sum_probs=6.1
Q ss_pred EecccCCCch
Q 020328 109 WWKGWKLPDM 118 (327)
Q Consensus 109 wWKGws~SDl 118 (327)
.--|+++.|+
T Consensus 56 r~~G~sL~eI 65 (142)
T 3gp4_A 56 RRAGLSIEAL 65 (142)
T ss_dssp HHTTCCHHHH
T ss_pred HHcCCCHHHH
Confidence 4457776665
No 138
>3f6n_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding, D binding protein; 3.10A {Cauliflower mosaic virus}
Probab=39.56 E-value=55 Score=27.85 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHH---HHHHHHHHHHH
Q 020328 161 DVNKIVEISQATQEEVTILRGRSKLIGDEFQSV---RDIVQTLESKL 204 (327)
Q Consensus 161 kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v---~~~V~~Le~Ki 204 (327)
.|.+.+++++.+.++|..+..++++|-.|..+- ....+.+..||
T Consensus 3 nl~~i~~ei~e~~~~i~~l~~~Ik~il~~~~st~~~~~~lEsiAAKI 49 (129)
T 3f6n_A 3 NLNQIQKEVSEILSDQKSMKADIKAILELLGSQNPIKESLETVAAKI 49 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhhHHHHHHHH
Confidence 456677778888888888888888887777773 33344444444
No 139
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=39.35 E-value=1.4e+02 Score=24.92 Aligned_cols=54 Identities=17% Similarity=0.174 Sum_probs=29.7
Q ss_pred HhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHH
Q 020328 153 SKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIE 206 (327)
Q Consensus 153 qRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ 206 (327)
+.|+.++..+.+.+.=....+.+..++...++....+++.++.-+..||.++..
T Consensus 82 ~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~~ 135 (138)
T 3hnw_A 82 LDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELND 135 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333334444444444444444455555555566666677777777777776653
No 140
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=38.84 E-value=2.4e+02 Score=27.30 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=28.9
Q ss_pred hhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhh
Q 020328 120 FATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKIT 156 (327)
Q Consensus 120 fVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId 156 (327)
|-.|+.+.+....+-|.+......|..+|+..-++-.
T Consensus 128 ~kerK~~~~~~~k~qk~l~~~~~~l~KaKk~Y~~~ck 164 (486)
T 3haj_A 128 FKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACK 164 (486)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4457788888888888888888899999888765543
No 141
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=38.78 E-value=46 Score=23.32 Aligned_cols=30 Identities=10% Similarity=0.382 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 020328 139 DVYSSISAAQRQLSSKITSVDRDVNKIVEI 168 (327)
Q Consensus 139 qVs~sLaaaKrHLsqRId~vD~kLDeq~ei 168 (327)
.+-+.+.+-...|..||+.+..|||...+.
T Consensus 9 dlvsel~~r~e~LE~Ri~~LE~KLd~L~~~ 38 (43)
T 2pnv_A 9 DMISDLNERSEDFEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 445667778888999999999999987654
No 142
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=38.60 E-value=58 Score=31.59 Aligned_cols=63 Identities=11% Similarity=0.254 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhh
Q 020328 144 ISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGK 210 (327)
Q Consensus 144 LaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~k 210 (327)
+-..+|.+..+++.+..+ .++++++|..- ..-.++.+.+..++..+..-+..||.++..++.+
T Consensus 35 ~~~~~r~~~~~~~~l~~~---~n~~sk~i~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (425)
T 2dq3_A 35 LDKRRREIIKRLEALRSE---RNKLSKEIGKL-KREGKDTTEIQNRVKELKEEIDRLEEELRKVEEE 97 (425)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHTTGG-GSSCSCTTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHH-hhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666666666666554 44556665431 1112445556666666666666666666666654
No 143
>2l3l_A Tubulin-specific chaperone C; tubulin binding cofactor; NMR {Homo sapiens}
Probab=38.46 E-value=1.3e+02 Score=24.30 Aligned_cols=73 Identities=7% Similarity=0.008 Sum_probs=57.3
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhh--hhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 020328 135 RQLEDVYSSISAAQRQLSSKITSV--DRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEG 209 (327)
Q Consensus 135 KqLeqVs~sLaaaKrHLsqRId~v--D~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~ 209 (327)
...+..+.+...-+..+..+|+.. -+.+|++..=+...++.|++.-.-|- -+|+..-+..+..|..++++...
T Consensus 31 E~~~~F~~~F~~~~~~Ie~~l~~~~~~~~ld~i~~~I~~Lqk~v~das~fLp--~YD~R~~q~~i~~L~~~l~e~r~ 105 (111)
T 2l3l_A 31 ENSHFFVATFARERAAVEELLERAESVERLEEAASRLQGLQKLINDSVFFLA--AYDLRQGQEALARLQAALAERRR 105 (111)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHSTTTSC--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777777777788888888866 55688888888888889988777654 47899999999999999887643
No 144
>4ack_A TSSL; protein transport, microbial surface structures, virul factor; 2.15A {Francisella novicida} PDB: 4acl_A
Probab=37.78 E-value=1e+02 Score=27.63 Aligned_cols=65 Identities=18% Similarity=0.201 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHHHHh
Q 020328 162 VNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCDRARE 227 (327)
Q Consensus 162 LDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~f~~~ 227 (327)
++-.-+|++.|++-+.+-+-|-++|..-=.+|+++|..+-.+|.. ...+..--.-++.+|.|+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ir~~I~~~re~L~~-gysE~~~~~ilFAlcAlIDE 71 (185)
T 4ack_A 7 IEIILDIIKTTREIIEDNDNDNEKISYHRNNIRKSIFFLQEELLE-KYSETVCKYIVFPLLAYVDE 71 (185)
T ss_dssp HHHHHHHHHHHHHHTC---CCTTHHHHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHhHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHH
Confidence 344567889999888888889999998889999999998888888 77777777889999999864
No 145
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=37.75 E-value=1.2e+02 Score=23.58 Aligned_cols=65 Identities=12% Similarity=0.203 Sum_probs=29.6
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHH
Q 020328 154 KITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGV 218 (327)
Q Consensus 154 RId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV 218 (327)
+|+.+..++||.+.+-..--|+|-+=.+.++.+.+--+.++..-......=..+.-+.=.-|..+
T Consensus 6 ~l~~vq~ev~evk~iM~~NI~kvL~RgekL~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~ 70 (91)
T 3hd7_A 6 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKM 70 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555544555444444444444444444444433333333333333333333
No 146
>1sum_B Phosphate transport system protein PHOU homolog 2; ABC transport, PST, structural genomics, berkeley STRU genomics center, BSGC; 2.00A {Thermotoga maritima} SCOP: a.7.12.1
Probab=37.42 E-value=1.9e+02 Score=24.62 Aligned_cols=79 Identities=13% Similarity=0.114 Sum_probs=47.0
Q ss_pred hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH-----------H------HHHhhcchhh
Q 020328 123 RRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQE-----------E------VTILRGRSKL 185 (327)
Q Consensus 123 KRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~-----------e------V~~v~~dls~ 185 (327)
++.+..-+.-+.++|+...++|..-...+.++|...|+.+|....-...--- + +..+-.|+++
T Consensus 13 ~~~l~~M~~~v~~~l~~a~~al~~~d~~~a~~V~~~d~~iD~l~~~I~~~~~~lla~~qp~a~dlr~i~~~l~i~~dlER 92 (235)
T 1sum_B 13 KKGVLKAGWFIEKMFRNSISSLVERNESLAREVIADEEVVDQMEVEIQEKAMEVLGLFSPIGKPLLTVTAGIRVAELIEN 92 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHH
Confidence 4555566666677777777777666667778888888777765432221111 1 1233456677
Q ss_pred hhhHHHHHHHHHHHHH
Q 020328 186 IGDEFQSVRDIVQTLE 201 (327)
Q Consensus 186 ig~Dv~~v~~~V~~Le 201 (327)
||+-..+|-..+..+.
T Consensus 93 IgD~a~~Ia~~~~~~~ 108 (235)
T 1sum_B 93 IADKCHDIAKNVLELM 108 (235)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 7766666655554443
No 147
>3e7k_A TRPM7 channel; coiled-coil, antiparallel, ION channel, assembly domain, Trp channel, membrane protein; 2.01A {Rattus norvegicus}
Probab=37.12 E-value=1.1e+02 Score=22.59 Aligned_cols=45 Identities=16% Similarity=0.333 Sum_probs=36.1
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Q 020328 127 SDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEE 175 (327)
Q Consensus 127 snAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~e 175 (327)
++=++.|.-+|+.|.+-+...|+. |..||.++-+.++++..+-+-
T Consensus 8 ~eRve~m~~~l~Evnekv~~ik~s----L~~LD~~lg~Lqdlsal~v~t 52 (56)
T 3e7k_A 8 FERVEQMSIQIKEVGDRVNYIKRS----LQSLDSQIGHLQDLSALTVDT 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhHHHHHHHHHHHH
Confidence 455788999999999999999885 457888888888888876543
No 148
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=36.67 E-value=2e+02 Score=28.94 Aligned_cols=35 Identities=14% Similarity=0.349 Sum_probs=26.9
Q ss_pred CCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHH
Q 020328 115 LPDMMFATRRSLSDACNSVARQLEDVYSSISAAQR 149 (327)
Q Consensus 115 ~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKr 149 (327)
+.|+|.==.++..+-+..|-..|++++.+=+.|+.
T Consensus 82 lad~L~kye~~V~~dl~~Le~~l~~isn~Ts~a~~ 116 (461)
T 3ghg_B 82 LQEALLQQERPIRNSVDELNNNVEAVSQTSSSSFQ 116 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcccchhhHHHHHHHHHHHHHhhhHHHHH
Confidence 66888888888888888888888888766555543
No 149
>2i0m_A Phosphate transport system protein PHOU; zinc-binding protein, structural genomics, PSI-2, PROT structure initiative; 2.40A {Streptococcus pneumoniae}
Probab=35.82 E-value=1.5e+02 Score=24.73 Aligned_cols=46 Identities=11% Similarity=0.158 Sum_probs=31.4
Q ss_pred hhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 020328 122 TRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVE 167 (327)
Q Consensus 122 TKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~e 167 (327)
.|+.+..-+.-+.++|+...+++..-...+.++|...|+++|+...
T Consensus 12 l~~~l~~M~~~v~~~l~~a~~al~~~d~~~a~~v~~~d~~iD~l~~ 57 (216)
T 2i0m_A 12 LEQSFLGLGQLVLETASKALLALASKDKEMAELIINKDHAINQGQS 57 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHhHHHHHHHHH
Confidence 3455566666667777777777766566777788777777776543
No 150
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=35.64 E-value=1.3e+02 Score=23.79 Aligned_cols=35 Identities=14% Similarity=0.254 Sum_probs=16.9
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHH
Q 020328 169 SQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESK 203 (327)
Q Consensus 169 s~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~K 203 (327)
-+.|++|++.++.+.-.+.++++.-..--..|+..
T Consensus 26 KQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e 60 (81)
T 1wt6_A 26 RQSLSREMEAIRTDNQNFASQLREAEARNRDLEAH 60 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555544444443333333
No 151
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=35.58 E-value=62 Score=24.69 Aligned_cols=15 Identities=7% Similarity=0.277 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHhcC
Q 020328 61 LLAEVSSVQQELSHV 75 (327)
Q Consensus 61 L~aQV~~LaqElr~L 75 (327)
+..|+..|..+++.+
T Consensus 20 l~~q~~~l~~~~~e~ 34 (107)
T 1fxk_A 20 ISVQKQTVEMQINET 34 (107)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666777776666665
No 152
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=35.45 E-value=86 Score=25.85 Aligned_cols=27 Identities=11% Similarity=0.167 Sum_probs=13.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 020328 183 SKLIGDEFQSVRDIVQTLESKLIEIEG 209 (327)
Q Consensus 183 ls~ig~Dv~~v~~~V~~Le~Ki~~ie~ 209 (327)
+..+...++.++.+...|+.+|+..+.
T Consensus 104 ~~~l~~~i~~L~~~~~~L~~~i~~~~~ 130 (148)
T 3gpv_A 104 EANVLQLIQDTEKNLKKIQQKIAKYED 130 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555555555566555543
No 153
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=34.59 E-value=8.3 Score=33.83 Aligned_cols=14 Identities=36% Similarity=0.387 Sum_probs=11.2
Q ss_pred eeeEcCcccceeec
Q 020328 9 TFLVGAGILTSVLA 22 (327)
Q Consensus 9 ~ILvGAG~~GSVl~ 22 (327)
+|+||||++|..++
T Consensus 7 ViIVGaGpaGl~~A 20 (397)
T 3oz2_A 7 VLVVGGGPGGSTAA 20 (397)
T ss_dssp EEEECCSHHHHHHH
T ss_pred EEEECcCHHHHHHH
Confidence 68999999987543
No 154
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=34.14 E-value=2.5e+02 Score=28.34 Aligned_cols=37 Identities=8% Similarity=0.285 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Q 020328 140 VYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEV 176 (327)
Q Consensus 140 Vs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV 176 (327)
|.+.|..-++-...-|+.|...|++....+..+.+-|
T Consensus 82 lad~L~kye~~V~~dl~~Le~~l~~isn~Ts~a~~~v 118 (461)
T 3ghg_B 82 LQEALLQQERPIRNSVDELNNNVEAVSQTSSSSFQYM 118 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHhcccchhhHHHHHHHHHHHHHhhhHHHHHHH
Confidence 3344444444444444444444444444443333333
No 155
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=34.01 E-value=2.8e+02 Score=28.27 Aligned_cols=79 Identities=19% Similarity=0.277 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhhHHHH------------HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHH
Q 020328 126 LSDACNSVARQLEDVY------------SSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSV 193 (327)
Q Consensus 126 msnAv~svtKqLeqVs------------~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v 193 (327)
..++-..+-+++.++. +....-++++.+|++.. +..+..++.+=+..-+..-.++..+.+.+
T Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------i~~~~~~l~~~~~~~~~~~~~~~~~~~~l 667 (695)
T 2j69_A 594 VKTAKKELVKHLPQVAHEQSQVVYNAVKECFDSYEREVSKRINDD------IVSRKSELDNLVKQKQTREINRESEFNRL 667 (695)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 3444555666665544 33334444444444322 22223333333444445556666667777
Q ss_pred HHHHHHHHHHHHHhhhh
Q 020328 194 RDIVQTLESKLIEIEGK 210 (327)
Q Consensus 194 ~~~V~~Le~Ki~~ie~k 210 (327)
+.+..+.-.+|..++..
T Consensus 668 ~~~~~~~~~~~~~~~~~ 684 (695)
T 2j69_A 668 KNLQEDVIAQLQKIEAA 684 (695)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHH
Confidence 77666666666666653
No 156
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=33.21 E-value=3.3e+02 Score=26.82 Aligned_cols=16 Identities=19% Similarity=0.366 Sum_probs=7.1
Q ss_pred hhHHHHHHHHHhhhHH
Q 020328 124 RSLSDACNSVARQLED 139 (327)
Q Consensus 124 RnmsnAv~svtKqLeq 139 (327)
..|++..+++|.|-||
T Consensus 204 ~elA~~L~SLT~HyDq 219 (413)
T 4hpq_C 204 QELADFLKSFTDHFDK 219 (413)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444443
No 157
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=33.16 E-value=67 Score=28.14 Aligned_cols=21 Identities=14% Similarity=0.131 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhh
Q 020328 192 SVRDIVQTLESKLIEIEGKQD 212 (327)
Q Consensus 192 ~v~~~V~~Le~Ki~~ie~kQd 212 (327)
+.+..+..+.+-+.+...++|
T Consensus 104 k~~a~~~q~~~d~~~~~~~~~ 124 (158)
T 3tul_A 104 QAEAAVEQAGKEATEAKEALD 124 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555444444
No 158
>2xz3_A Maltose ABC transporter periplasmic protein, ENVE glycoprotein; viral protein, viral membrane fusion, hairpin, chimera; HET: MAL; 1.95A {Escherichia coli} PDB: 1mg1_A*
Probab=33.16 E-value=2e+02 Score=27.02 Aligned_cols=39 Identities=10% Similarity=0.171 Sum_probs=30.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHH
Q 020328 183 SKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKL 221 (327)
Q Consensus 183 ls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~L 221 (327)
+.....|++.+...|.+|+..|.++..=----.+|+.+|
T Consensus 381 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 419 (463)
T 2xz3_A 381 IHVLEQDQQRLITAINQTHYNLLNVASVVAQNRRGLDWL 419 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHH
Confidence 466778888899999999999998876654455677766
No 159
>1xwj_B Talin, metavinculin; cell adhesion/protein binding complex; 2.60A {Gallus gallus} PDB: 1rkc_B
Probab=32.71 E-value=29 Score=21.60 Aligned_cols=24 Identities=17% Similarity=0.451 Sum_probs=19.6
Q ss_pred hhhhHHHHHHHHHhhhHHHHHHHH
Q 020328 122 TRRSLSDACNSVARQLEDVYSSIS 145 (327)
Q Consensus 122 TKRnmsnAv~svtKqLeqVs~sLa 145 (327)
|+|-+++++..|+.++.+|-++|.
T Consensus 2 ~q~el~~~~r~v~ekV~~vlaaLq 25 (26)
T 1xwj_B 2 TKKELIESARKVSEKVSHVLAALQ 25 (26)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhh
Confidence 678899999999999998877663
No 160
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=32.04 E-value=78 Score=22.59 Aligned_cols=38 Identities=16% Similarity=0.413 Sum_probs=24.6
Q ss_pred hHHHHHHHHHhh----hHHHHHHHHHHHHHHHHhhhhhhhhH
Q 020328 125 SLSDACNSVARQ----LEDVYSSISAAQRQLSSKITSVDRDV 162 (327)
Q Consensus 125 nmsnAv~svtKq----LeqVs~sLaaaKrHLsqRId~vD~kL 162 (327)
-|..+|..+=.| .+.+|+.|-.-=..++.|||.|+..+
T Consensus 6 dLt~~vq~LL~qmq~kFq~mS~~I~~riDdM~~RIDdLE~si 47 (48)
T 3ci9_A 6 DLTSVVQTLLQQMQDKFQTISDQIIGRIDDMSSRIDDLEKNI 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence 345555554444 45677777777889999999888765
No 161
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=31.11 E-value=1.1e+02 Score=23.21 Aligned_cols=16 Identities=13% Similarity=0.225 Sum_probs=7.2
Q ss_pred hhHHHHHHHHHhhhHH
Q 020328 124 RSLSDACNSVARQLED 139 (327)
Q Consensus 124 RnmsnAv~svtKqLeq 139 (327)
+...+|...+.+..+.
T Consensus 61 ~~~~e~~~~L~~~~e~ 76 (107)
T 1fxk_A 61 VAKDELTEELQEKLET 76 (107)
T ss_dssp ECHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH
Confidence 3445555444444433
No 162
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=30.80 E-value=1.3e+02 Score=30.04 Aligned_cols=23 Identities=9% Similarity=-0.013 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHH
Q 020328 143 SISAAQRQLSSKITSVDRDVNKI 165 (327)
Q Consensus 143 sLaaaKrHLsqRId~vD~kLDeq 165 (327)
+|-..+|.+..+++.+..+.++.
T Consensus 41 ~ld~~~r~~~~~~~~l~~~rN~~ 63 (484)
T 3lss_A 41 EADKKWRRTQFLTEASKKLINIC 63 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777888777777665543
No 163
>1qu7_A Methyl-accepting chemotaxis protein I; serine, four helical-bundle, signaling protein; 2.60A {Escherichia coli} SCOP: h.4.5.1
Probab=30.77 E-value=2.8e+02 Score=24.41 Aligned_cols=15 Identities=0% Similarity=0.235 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHhcC
Q 020328 61 LLAEVSSVQQELSHV 75 (327)
Q Consensus 61 L~aQV~~LaqElr~L 75 (327)
+..+++.|.+..+++
T Consensus 54 ~~~~~~~l~~~s~~I 68 (227)
T 1qu7_A 54 VVQTMRDISTSSQKI 68 (227)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444444443
No 164
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=30.76 E-value=1.3e+02 Score=23.22 Aligned_cols=14 Identities=14% Similarity=0.508 Sum_probs=5.4
Q ss_pred HHhhhhhhhhHHHH
Q 020328 152 SSKITSVDRDVNKI 165 (327)
Q Consensus 152 sqRId~vD~kLDeq 165 (327)
..+|+.+..+++..
T Consensus 83 e~~i~~le~~~~~l 96 (117)
T 2zqm_A 83 EVRLNALERQEKKL 96 (117)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 165
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=30.71 E-value=11 Score=33.56 Aligned_cols=13 Identities=38% Similarity=0.521 Sum_probs=10.2
Q ss_pred eeeEcCcccceee
Q 020328 9 TFLVGAGILTSVL 21 (327)
Q Consensus 9 ~ILvGAG~~GSVl 21 (327)
++|||||++|..+
T Consensus 4 V~IVGaGpaGl~~ 16 (412)
T 4hb9_A 4 VGIIGAGIGGTCL 16 (412)
T ss_dssp EEEECCSHHHHHH
T ss_pred EEEECcCHHHHHH
Confidence 5788999998653
No 166
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=30.70 E-value=42 Score=27.30 Aligned_cols=38 Identities=21% Similarity=0.204 Sum_probs=34.1
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 020328 172 TQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEG 209 (327)
Q Consensus 172 ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~ 209 (327)
+.++++.++..++....+-+.+.+-+..||.+|....-
T Consensus 10 ~~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l 47 (100)
T 1go4_E 10 SREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRAL 47 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66789999999999999999999999999999987443
No 167
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=30.58 E-value=75 Score=30.35 Aligned_cols=10 Identities=0% Similarity=0.189 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 020328 192 SVRDIVQTLE 201 (327)
Q Consensus 192 ~v~~~V~~Le 201 (327)
.+++.|..|+
T Consensus 44 ~l~~~i~~l~ 53 (323)
T 1lwu_C 44 RLQQQLVDIR 53 (323)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 168
>4g2k_A General control protein GCN4, envelope glycoprote chimera; GP2-GCN4 fusion, viral protein; 1.90A {Saccharomyces cerevisiae}
Probab=30.35 E-value=1.1e+02 Score=25.86 Aligned_cols=36 Identities=14% Similarity=0.310 Sum_probs=16.6
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHH
Q 020328 171 ATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIE 206 (327)
Q Consensus 171 ~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ 206 (327)
++.|.|.++-.++-.+..++..++..|..|+..+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~L~~~l~~ 53 (125)
T 4g2k_A 18 QIEDKIEEILSKIYHIENEIARIKKLIGNLVSRLRR 53 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444443
No 169
>1fgj_A Hydroxylamine oxidoreductase; nitrification; HET: HEM HEC; 2.80A {Nitrosomonas europaea} SCOP: a.138.1.3
Probab=30.25 E-value=15 Score=37.11 Aligned_cols=10 Identities=30% Similarity=0.923 Sum_probs=8.4
Q ss_pred heeeEEeccc
Q 020328 104 GYGYVWWKGW 113 (327)
Q Consensus 104 GYgYmwWKGw 113 (327)
..+|.||.||
T Consensus 462 ~~~~~~~~G~ 471 (546)
T 1fgj_A 462 PGGWTYTEGW 471 (546)
T ss_dssp GGGTSSSSTH
T ss_pred CCccceecch
Confidence 4469999999
No 170
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=30.23 E-value=1.9e+02 Score=22.22 Aligned_cols=61 Identities=16% Similarity=0.224 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHH
Q 020328 138 EDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLI 205 (327)
Q Consensus 138 eqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~ 205 (327)
..+-.+|+.+..++...++. .+........++..++.|+...-.|-+.+-++=..||--|.
T Consensus 13 ~~Le~~l~e~E~~~~~~l~~-------~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIa 73 (86)
T 1x8y_A 13 AAKEAKLRDLEDSLARERDT-------SRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIH 73 (86)
T ss_dssp TTHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 33445555555554444433 33444445666777777777777777777666666665553
No 171
>1fzc_A Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: h.1.8.1 PDB: 1fzb_A* 1fza_A* 1fze_A* 1fzf_A* 1fzg_A* 1n86_A* 2h43_A* 2hlo_A* 2hod_A* 2hpc_A* 2q9i_A* 2xnx_A 2xny_A 2z4e_A* 3e1i_A* 1n8e_A 2oyh_A* 1ltj_A* 1lt9_A* 1re4_A* ...
Probab=29.88 E-value=51 Score=26.39 Aligned_cols=28 Identities=32% Similarity=0.354 Sum_probs=15.9
Q ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHHHH
Q 020328 149 RQLSSKITSVDRDVNKIVEISQATQEEV 176 (327)
Q Consensus 149 rHLsqRId~vD~kLDeq~eis~~ik~eV 176 (327)
..|-.||+.+..|+++|.+-....++.|
T Consensus 3 edLrrrI~~LkrkV~~q~~~i~~Lq~nv 30 (87)
T 1fzc_A 3 EDLRSRIEVLKRKVIEKVQHIQLLQKNV 30 (87)
T ss_dssp ------CTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577899998888888876655555444
No 172
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=29.40 E-value=2.3e+02 Score=24.81 Aligned_cols=57 Identities=2% Similarity=-0.022 Sum_probs=30.9
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHH
Q 020328 148 QRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLI 205 (327)
Q Consensus 148 KrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~ 205 (327)
..++..|++.|..+-+...+.+..-+..+.+.. ++.+|..+++.+..-+...+..|.
T Consensus 187 ~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~-~~~~F~~~~~~l~~Wl~~~~~~l~ 243 (323)
T 3edv_A 187 ADDIQKRENEVLEAWKSLLDACESRRVRLVDTG-DKFRFFSMVRDLMLWMEDVIRQIE 243 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566666666666665555555555555444 344555555555555555444444
No 173
>3b5n_A Synaptobrevin homolog 1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=29.39 E-value=1.6e+02 Score=21.08 Aligned_cols=22 Identities=14% Similarity=0.231 Sum_probs=10.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhh
Q 020328 137 LEDVYSSISAAQRQLSSKITSV 158 (327)
Q Consensus 137 LeqVs~sLaaaKrHLsqRId~v 158 (327)
|.+|...|..+|.-+..-|+.|
T Consensus 4 l~~vq~~l~evk~iM~~NI~~v 25 (61)
T 3b5n_A 4 TAELQAEIDDTVGIMRDNINKV 25 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444443
No 174
>1wyy_A E2 glycoprotein; membrane fusion, severe acute respiratory syndrome, viral PR; 2.20A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1wnc_A 2fxp_A
Probab=28.75 E-value=31 Score=30.04 Aligned_cols=83 Identities=18% Similarity=0.337 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH------HHHHHhhcchhhhhhHHHHHHHHHHHH
Q 020328 127 SDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQ------EEVTILRGRSKLIGDEFQSVRDIVQTL 200 (327)
Q Consensus 127 snAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik------~eV~~v~~dls~ig~Dv~~v~~~V~~L 200 (327)
+.|.+.+.+||.+=-.++++.=..+-+|+|.+.....==.=|++... .|++++.-...++...++.++..+..|
T Consensus 56 ~~aL~~l~~qL~~nFgAISssi~dIy~rLd~leAdaQVDRLItGRl~s~nltL~eI~~Le~s~~~L~k~~~eLq~~Idnl 135 (149)
T 1wyy_A 56 AQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGGRGGSDVDLGDISGINASVVNIQKEIDRLNEVAKNL 135 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------------CCCCTTCCCCCCCCHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHhhh
Q 020328 201 ESKLIEIEG 209 (327)
Q Consensus 201 e~Ki~~ie~ 209 (327)
-.-+-.+|+
T Consensus 136 N~TLVdLew 144 (149)
T 1wyy_A 136 NESLIDLQE 144 (149)
T ss_dssp GGGCCCCCC
T ss_pred HhhhhhHHH
No 175
>2bsg_A Fibritin; viral protein, attachment protein, bacteriophage assembly, chaperone, coiled coil, structural protein; 15.00A {Bacteriophage T4}
Probab=28.71 E-value=57 Score=33.15 Aligned_cols=85 Identities=14% Similarity=0.146 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHHHHH---hhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHH
Q 020328 124 RSLSDACNSVARQLEDVYSSISAAQRQLSS---KITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTL 200 (327)
Q Consensus 124 RnmsnAv~svtKqLeqVs~sLaaaKrHLsq---RId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~L 200 (327)
-+|..|--.|-|..+.+.+-+...+..+.. +|...++-||..-... .-++|..-+.|++.+..++...+..+..+
T Consensus 43 G~lNra~v~VQ~NV~~Ld~N~~~~~~~~ne~~~~Vn~I~~~L~~~GD~~--vi~qI~~n~~dI~~Lk~~~~~~~~~l~~~ 120 (487)
T 2bsg_A 43 GSMNRPTVSVLRNVEVLDKNIGILKTSLETANSDIKTIQGILDVSGDIE--ALAQIGINKKDISDLKTLTSEHTEILNGT 120 (487)
T ss_pred cccccchhhhhhhHHHHhhhHHHHHhhHHHHHHHHHHHHHHHhccccHH--HHHHHHhhHHHHHHHhcchhhhhhhhhhh
Confidence 356667777888888888888877777666 4444444444322211 23445555555555555555556566666
Q ss_pred HHHHHHhhhh
Q 020328 201 ESKLIEIEGK 210 (327)
Q Consensus 201 e~Ki~~ie~k 210 (327)
..++++|+..
T Consensus 121 ~~~~~ei~~d 130 (487)
T 2bsg_A 121 NNTVDSILAD 130 (487)
T ss_pred ccchHHHHhh
Confidence 6666666544
No 176
>1t72_A Phosphate transport system protein PHOU homolog; helix bundle, structural genomics, BSGC structure funded by NIH, protein structure initiative; 2.90A {Aquifex aeolicus} SCOP: a.7.12.1 PDB: 1t8b_A
Probab=28.43 E-value=2.6e+02 Score=23.35 Aligned_cols=78 Identities=9% Similarity=0.165 Sum_probs=44.6
Q ss_pred hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHH-----HHHH------H------HHHHhhcchhh
Q 020328 123 RRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEIS-----QATQ------E------EVTILRGRSKL 185 (327)
Q Consensus 123 KRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis-----~~ik------~------eV~~v~~dls~ 185 (327)
++.+..-+..+.+.|+.+.+++..-...+..+|...|+++|+...-. +.+. . .+..+-.++++
T Consensus 17 ~~~l~~M~~~v~~~l~~a~~al~~~d~~~a~~v~~~d~~iD~l~~~i~~~~~~~l~~~~~~~~d~~~~~~~l~i~~~lER 96 (227)
T 1t72_A 17 KEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEVDIERRCIRMIALYQPEAGDLRMIMGIYKIVSDLER 96 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH
Confidence 44555555666666777777776555667777877777777653221 1111 0 11224466677
Q ss_pred hhhHHHHHHHHHHHH
Q 020328 186 IGDEFQSVRDIVQTL 200 (327)
Q Consensus 186 ig~Dv~~v~~~V~~L 200 (327)
||+-..+|-..+..+
T Consensus 97 IgD~a~nIa~~~~~~ 111 (227)
T 1t72_A 97 MGDEAENIAERAILL 111 (227)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 777666665555444
No 177
>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1
Probab=28.06 E-value=2.6e+02 Score=28.44 Aligned_cols=69 Identities=13% Similarity=0.252 Sum_probs=54.0
Q ss_pred Cchhhhhhh--hHHHHHHHHHhhhHHHHHHHHHHHH-----------------------------HHHHhhhhhhhhHHH
Q 020328 116 PDMMFATRR--SLSDACNSVARQLEDVYSSISAAQR-----------------------------QLSSKITSVDRDVNK 164 (327)
Q Consensus 116 SDlMfVTKR--nmsnAv~svtKqLeqVs~sLaaaKr-----------------------------HLsqRId~vD~kLDe 164 (327)
.|-+|+.-| ++.++...+.+.+++..+.....++ ++.++-..++..+.=
T Consensus 329 ~D~~w~~~r~~~f~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lk~~V~~LP~~~~~~~~l~~H~~i 408 (671)
T 1mqs_A 329 NDFFWMENSHLPFPEAAENVEAALNTYKEEAAEITRKTGVTNISDLDPNSNNDTVQIQEVVKKLPELTAKKNTIDTHMNI 408 (671)
T ss_dssp SCTTHHHHSSSBHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------CCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhcccCccCcccccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 799999888 7889999999999988887654332 556677778888888
Q ss_pred HHHHHHHHH----HHHHHhhcchh
Q 020328 165 IVEISQATQ----EEVTILRGRSK 184 (327)
Q Consensus 165 q~eis~~ik----~eV~~v~~dls 184 (327)
+.+|.+.|+ +++.++..++-
T Consensus 409 a~~l~~~i~~~~l~~~~e~EQ~l~ 432 (671)
T 1mqs_A 409 FAALLSQLESKSLDTFFEVEQDPG 432 (671)
T ss_dssp HHHHHHHHHTTTCHHHHHHTSCCS
T ss_pred HHHHHHHHhHhhHHHHHHHHHHHh
Confidence 888888887 46777777773
No 178
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=28.04 E-value=1.2e+02 Score=26.64 Aligned_cols=51 Identities=6% Similarity=0.216 Sum_probs=28.0
Q ss_pred chhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 020328 117 DMMFATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVE 167 (327)
Q Consensus 117 DlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~e 167 (327)
|.+|.+--.|.++...-...|..=...|...+..|.++.+.|...++...+
T Consensus 34 e~l~~~q~~lq~sl~~~~~~l~~g~~~L~~~~~~Le~~~~~L~~~i~~l~~ 84 (174)
T 2p22_A 34 DKILTRQTVMQESIARFHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVLTA 84 (174)
T ss_dssp HHTGGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555556656655555555555555555555555555555555554444
No 179
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=27.93 E-value=1.7e+02 Score=24.01 Aligned_cols=47 Identities=6% Similarity=0.121 Sum_probs=29.9
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHH-HHHhhc
Q 020328 183 SKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCD-RARELE 229 (327)
Q Consensus 183 ls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~-f~~~~~ 229 (327)
.+.+...++.++.+...|+.++..++......+.-...|.+ +++..+
T Consensus 89 ~~~L~~~i~~l~~~l~~l~~~i~~~~~~~~~~~~~~~~Li~~~~~~~~ 136 (146)
T 3hh0_A 89 REVLLAEQERIAKVLSHMDEMTKKFQKEERVNVALFSSFLQTFIWEKE 136 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHccc
Confidence 34555567777777888888888887776666655555543 443333
No 180
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=27.57 E-value=3.3e+02 Score=24.20 Aligned_cols=60 Identities=13% Similarity=0.314 Sum_probs=30.0
Q ss_pred HHHHhhhHHHHHHHHHH----HHHHHHhhhhhhhhHHHH-HHHHHHHHHHHHHhhcchhhhhhHH
Q 020328 131 NSVARQLEDVYSSISAA----QRQLSSKITSVDRDVNKI-VEISQATQEEVTILRGRSKLIGDEF 190 (327)
Q Consensus 131 ~svtKqLeqVs~sLaaa----KrHLsqRId~vD~kLDeq-~eis~~ik~eV~~v~~dls~ig~Dv 190 (327)
+.+++-.+.+.+.|... |+.|.+.++.+-.+|.-- .|+...+.+++.++|..++-+..++
T Consensus 62 ~~l~p~~ee~~~~l~~~~~~lr~~l~kd~ee~r~~l~Py~~el~~~~~~~~eelr~~L~P~~eel 126 (243)
T 2a01_A 62 EQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAEL 126 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSCCSSCSSTTHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred HHhCCcHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33444444444444333 333333344555555543 3355666666666666666665555
No 181
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=27.47 E-value=1.8e+02 Score=23.49 Aligned_cols=20 Identities=20% Similarity=0.267 Sum_probs=7.1
Q ss_pred hhHHHHHHHHHHHHHHHHhh
Q 020328 136 QLEDVYSSISAAQRQLSSKI 155 (327)
Q Consensus 136 qLeqVs~sLaaaKrHLsqRI 155 (327)
+.+++...|..==+.|.++|
T Consensus 44 ~Vd~t~~eL~~EI~~L~~eI 63 (96)
T 1t3j_A 44 QVDMTQKHLEEEIARLSKEI 63 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 182
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=27.47 E-value=2.2e+02 Score=22.47 Aligned_cols=69 Identities=10% Similarity=0.158 Sum_probs=37.4
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHH
Q 020328 130 CNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLI 205 (327)
Q Consensus 130 v~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~ 205 (327)
.+++-++...+-..|+.++.++...++..... ......++..++.|+..--.|-+.+-.+-..||-.|.
T Consensus 14 ~~~Lq~~~~~LE~~l~e~E~~~~~e~~~~q~~-------i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIa 82 (95)
T 3mov_A 14 YFQGQKESRACLERIQELEDLLAKEKDNSRRM-------LTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEIS 82 (95)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555556666666555554444443 3344555666666666666666666666666665543
No 183
>1gl2_C VTI1B, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Mus musculus} SCOP: h.1.15.1
Probab=26.91 E-value=1.8e+02 Score=21.19 Aligned_cols=50 Identities=8% Similarity=0.109 Sum_probs=24.1
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHH
Q 020328 154 KITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESK 203 (327)
Q Consensus 154 RId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~K 203 (327)
|+++=.++|+++..+...|.+-=..+-.+|..=++-+...+..+...+.-
T Consensus 3 rL~~t~~~l~~s~ri~~ETE~iG~~~l~~L~~QREql~~t~~~l~~~d~~ 52 (65)
T 1gl2_C 3 HMNRATQSIERSHRIATETDQIGTEIIEELGEQRDQLERTKSRLVNTNEN 52 (65)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHhHHHhHHhH
Confidence 45555555555555555555544444444444444444555444443333
No 184
>3l39_A Putative PHOU-like phosphate regulatory protein; BT4638, structural genomics, joint center for structural genomics, JCSG; 1.93A {Bacteroides thetaiotaomicron}
Probab=26.82 E-value=3.1e+02 Score=23.78 Aligned_cols=76 Identities=8% Similarity=0.176 Sum_probs=43.1
Q ss_pred HHhhhHHHHHHHHHHHHHHH-HhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHH---HHHHHHHHHHHHhh
Q 020328 133 VARQLEDVYSSISAAQRQLS-SKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVR---DIVQTLESKLIEIE 208 (327)
Q Consensus 133 vtKqLeqVs~sLaaaKrHLs-qRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~---~~V~~Le~Ki~~ie 208 (327)
+...||.|-+.+..+=+.+. -+++.++..+.++.++....-+++.++=..+.+++.|.+.+. .-|..+|.+.|.+.
T Consensus 99 L~~~lDdI~D~ie~~a~~l~l~~~~~~~~~~~~l~~~i~~~~~~l~~ai~~L~~~~~~~~~i~~~~~eI~~lE~eaD~l~ 178 (227)
T 3l39_A 99 LASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIENQADDVY 178 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHHHHHHTTTTTTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666666665555544 244555666666655555555555555555555543544444 34777788777664
No 185
>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae}
Probab=26.42 E-value=2e+02 Score=26.48 Aligned_cols=39 Identities=3% Similarity=0.095 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHH
Q 020328 126 LSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIV 166 (327)
Q Consensus 126 msnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~ 166 (327)
|..+|+.+...+..+......+-++|..+|++ .+|....
T Consensus 132 L~~v~~~Le~e~~~l~~~~~~~L~~L~~~i~~--~~L~~Ll 170 (261)
T 3rkg_A 132 FINVMSALETDFKLHSQICIQILNDLENEVNR--LKLRHLL 170 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH--HHHHHHH
Confidence 55778888888888888888888888877765 4555443
No 186
>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}
Probab=26.34 E-value=39 Score=27.64 Aligned_cols=98 Identities=17% Similarity=0.226 Sum_probs=55.3
Q ss_pred heeeEEe-cccCCCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHH-HHHHHHHH-HHHHHhh
Q 020328 104 GYGYVWW-KGWKLPDMMFATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKI-VEISQATQ-EEVTILR 180 (327)
Q Consensus 104 GYgYmwW-KGws~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq-~eis~~ik-~eV~~v~ 180 (327)
-..|.|| |||.| ..+.+.++..++.....=..+..||-.++.+-.-. .++.+... ++...-.
T Consensus 26 ~~~~hw~v~g~~f---------------~~lh~~~~~~~~ee~~had~iaERI~~lGg~p~~~~~~~~~~s~i~~~~~~~ 90 (156)
T 2d5k_A 26 LHNFHWYVKGPNF---------------FSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGY 90 (156)
T ss_dssp HHHHHHHCCSTTH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCSCC
T ss_pred HHhheeeeECCCh---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC
Confidence 3457777 88865 35677888888888888888999999888774422 22222110 0111101
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhH
Q 020328 181 GRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTL 216 (327)
Q Consensus 181 ~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~ 216 (327)
...+.+..+++..+.++..+..=++.-+...|++..
T Consensus 91 ~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~ 126 (156)
T 2d5k_A 91 SAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSE 126 (156)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 222344555555555555555544444444555443
No 187
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=26.32 E-value=3.1e+02 Score=27.45 Aligned_cols=71 Identities=8% Similarity=0.027 Sum_probs=47.9
Q ss_pred HHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchh---hhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHH
Q 020328 152 SSKITSVDRDVNKIVEISQATQEEVTILRGRSK---LIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLC 222 (327)
Q Consensus 152 sqRId~vD~kLDeq~eis~~ik~eV~~v~~dls---~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC 222 (327)
-.+|-.+|.+--+...-.+.++.+-+.+...+. .-+.|.+.+..-+..|..+|..+|....-...-+..++
T Consensus 32 ~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~l 105 (485)
T 3qne_A 32 VDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKI 105 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666655555555556655555554433 34567888888899999999999988777776666653
No 188
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=26.16 E-value=2.2e+02 Score=21.87 Aligned_cols=67 Identities=9% Similarity=0.085 Sum_probs=38.9
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhh
Q 020328 145 SAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQ 211 (327)
Q Consensus 145 aaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQ 211 (327)
..-|-.|-.-|+|+-.-+++.+.=-+.=..-=+.+-.|+..+..|++...-.-..||.||+++..--
T Consensus 13 ~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl 79 (86)
T 3swk_A 13 TNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEI 79 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555554444443222211112334455666667778888888889999999886543
No 189
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=25.82 E-value=3.5e+02 Score=24.02 Aligned_cols=90 Identities=14% Similarity=0.193 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcch-----------hhhhhHHHHHHHHHHHHHHHHH
Q 020328 137 LEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRS-----------KLIGDEFQSVRDIVQTLESKLI 205 (327)
Q Consensus 137 LeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dl-----------s~ig~Dv~~v~~~V~~Le~Ki~ 205 (327)
|+.+.++=..-..+|-.-|+....+.-+...-....+.|+...+.++ +.+..++..++.....|-.+|-
T Consensus 33 l~EFqesSrELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ir 112 (189)
T 2v71_A 33 LVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVR 112 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444444444555544444444444444444443333 3334445555555566666666
Q ss_pred HhhhhhhhHhHHHHHHHHHHH
Q 020328 206 EIEGKQDITTLGVKKLCDRAR 226 (327)
Q Consensus 206 ~ie~kQd~Tn~GV~~LC~f~~ 226 (327)
.+|-..|-=..-...+|.-++
T Consensus 113 eLEq~NDdlEr~~R~~~~Sle 133 (189)
T 2v71_A 113 ELEQANDDLERAKRATIMSLE 133 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHhhHH
Confidence 666665555555555554443
No 190
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=25.80 E-value=3.2e+02 Score=24.83 Aligned_cols=33 Identities=9% Similarity=0.202 Sum_probs=26.8
Q ss_pred hhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Q 020328 122 TRRSLSDACNSVARQLEDVYSSISAAQRQLSSK 154 (327)
Q Consensus 122 TKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqR 154 (327)
.+|.+.+...-+.+++.+.+..|..+|+..-++
T Consensus 128 e~K~~~~~~~k~qk~~~~~~~~l~kaKk~Y~~~ 160 (320)
T 3m3w_A 128 ASRAAEDGFRKAQKPWLKRLKEVEASKKSYHTA 160 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457788888888889999998999888877663
No 191
>1xwm_A PHOU, phosphate uptake regulator; negative phosphate uptake regulator, structural genomics, protein structure initiative, PSI; 2.50A {Geobacillus stearothermophilus} SCOP: a.7.12.1
Probab=25.59 E-value=2.9e+02 Score=22.98 Aligned_cols=44 Identities=9% Similarity=0.168 Sum_probs=32.5
Q ss_pred hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHH
Q 020328 123 RRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIV 166 (327)
Q Consensus 123 KRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~ 166 (327)
++.+..-+.-+.+.|+...+++..--..+..+|...|+++|+..
T Consensus 13 ~~~l~~M~~~v~~ml~~a~~al~~~d~~~a~~v~~~d~~iD~l~ 56 (217)
T 1xwm_A 13 HNKLIEMGRLTEVALQQAIEAFQTQNANLAMAVIDGDGSIDALE 56 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhHHHHHHHH
Confidence 44555666667777778888887766778888888888888764
No 192
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=25.56 E-value=2.7e+02 Score=22.66 Aligned_cols=28 Identities=18% Similarity=0.281 Sum_probs=12.4
Q ss_pred HHHHHHHHHhhhHH---HHHHHHHHHHHHHH
Q 020328 126 LSDACNSVARQLED---VYSSISAAQRQLSS 153 (327)
Q Consensus 126 msnAv~svtKqLeq---Vs~sLaaaKrHLsq 153 (327)
|+|-.+++-..|+. -.+.|...|++|..
T Consensus 2 lan~La~le~sLe~EK~S~eeL~kQk~eL~~ 32 (101)
T 1d7m_A 2 MANRLAGLENSLESEKVSREQLIKQKDQLNS 32 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHhhhhhccHHHHHHHHHHHHH
Confidence 44444444444433 23444455554443
No 193
>2kvm_A Chromobox protein homolog 7; histone modification, lysine methylation, chromobox, polycom chromatin-binding; HET: MLY; NMR {Mus musculus}
Probab=25.51 E-value=31 Score=25.72 Aligned_cols=25 Identities=32% Similarity=0.666 Sum_probs=21.4
Q ss_pred hheeeEEecccCCCchhhhhhhhHHH
Q 020328 103 VGYGYVWWKGWKLPDMMFATRRSLSD 128 (327)
Q Consensus 103 vGYgYmwWKGws~SDlMfVTKRnmsn 128 (327)
+=| ++.|||++-+|--|....||.+
T Consensus 29 ~~Y-lVKWkGy~~~~~TWEp~~~L~~ 53 (74)
T 2kvm_A 29 VEY-LVKWKGWPPKYSTWEPEEHILD 53 (74)
T ss_dssp EEE-EEEETTSCGGGCEEEETTTCSC
T ss_pred EEE-EEEEcCCCCccCeEeeHHHCCC
Confidence 445 7899999999999999999985
No 194
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=25.31 E-value=3.9e+02 Score=24.37 Aligned_cols=21 Identities=24% Similarity=0.338 Sum_probs=11.1
Q ss_pred hhHHHHHHHHHhhhHHHHHHH
Q 020328 124 RSLSDACNSVARQLEDVYSSI 144 (327)
Q Consensus 124 RnmsnAv~svtKqLeqVs~sL 144 (327)
.+..+.+..+.++++++.+.+
T Consensus 167 d~~~~~l~~l~~~i~~lE~~l 187 (339)
T 4ev6_A 167 RSYSRILMNLEDELEELEDKL 187 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 344455555566666555443
No 195
>4abm_A Charged multivesicular BODY protein 4B; cell cycle, protein transport, HIV-1; 1.80A {Homo sapiens}
Probab=25.19 E-value=2.3e+02 Score=21.65 Aligned_cols=65 Identities=12% Similarity=0.244 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH-----HHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 143 SISAAQRQLSSKITSVDRDVNKIVEISQATQ-----EEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 143 sLaaaKrHLsqRId~vD~kLDeq~eis~~ik-----~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
.|..+..-|.++...++.+++++.++++.-- .-...++.+ ......++.+.....+||.-+..||
T Consensus 10 ~Lr~~~d~L~kkq~~L~~~i~~e~~~Ak~~~~knK~~Al~aLkrK-K~~E~qL~q~~~ql~~LE~q~~~iE 79 (79)
T 4abm_A 10 RLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKRAALQALKRK-KRYEKQLAQIDGTLSTIEFQREALE 79 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3455555667777777777777776666421 112222322 3344556666666666666655554
No 196
>3l4f_A RHO guanine nucleotide exchange factor 7; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=25.03 E-value=1.3e+02 Score=22.59 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhh
Q 020328 169 SQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQD 212 (327)
Q Consensus 169 s~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd 212 (327)
.=++++||.+++.+......=++..+.+-..||.-+-.+-..+|
T Consensus 9 VYalkDev~eLk~e~k~~k~~le~eqraRk~LE~~vrk~~k~~n 52 (61)
T 3l4f_A 9 VYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMN 52 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 34568888888888888888888888888888877666655544
No 197
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=25.00 E-value=97 Score=25.64 Aligned_cols=44 Identities=14% Similarity=0.214 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 020328 163 NKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEG 209 (327)
Q Consensus 163 Deq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~ 209 (327)
|+-..++...+.||..++..++.| ...-+..|..|.++|..+|+
T Consensus 11 d~rD~~Ie~Lkreie~lk~ele~l---~~E~q~~v~ql~~~i~~Le~ 54 (120)
T 3i00_A 11 DEKDHLIERLYREISGLKAQLENM---KTESQRVVLQLKGHVSELEA 54 (120)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
No 198
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=24.72 E-value=2.3e+02 Score=21.49 Aligned_cols=40 Identities=13% Similarity=0.187 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHH
Q 020328 166 VEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLI 205 (327)
Q Consensus 166 ~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~ 205 (327)
+........++..++.|+...-.|-+.+-++=..||--|.
T Consensus 32 q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIa 71 (84)
T 1gk4_A 32 QDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIA 71 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 3344444556666666666666666666666566665543
No 199
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=24.60 E-value=16 Score=34.63 Aligned_cols=15 Identities=40% Similarity=0.563 Sum_probs=13.5
Q ss_pred eeeEcCcccceeecc
Q 020328 9 TFLVGAGILTSVLAK 23 (327)
Q Consensus 9 ~ILvGAG~~GSVl~k 23 (327)
+|+||+|.+|+|++.
T Consensus 20 ~IIVGsG~aG~v~A~ 34 (526)
T 3t37_A 20 IVIVGGGSAGSLLAA 34 (526)
T ss_dssp EEEECCSHHHHHHHH
T ss_pred EEEECccHHHHHHHH
Confidence 599999999999885
No 200
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=24.58 E-value=5.5e+02 Score=27.99 Aligned_cols=62 Identities=6% Similarity=0.093 Sum_probs=37.1
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH----hhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 147 AQRQLSSKITSVDRDVNKIVEISQATQEEVTI----LRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 147 aKrHLsqRId~vD~kLDeq~eis~~ik~eV~~----v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
--+.|...|+.++.++++...--+.++++... +++.++++..+...+++-+..||..+...+
T Consensus 985 ~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~~~l~~~~~~~~ 1050 (1080)
T 2dfs_A 985 RVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQA 1050 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677788888887777766555555555443 344555555556666666666665554443
No 201
>2d9u_A Chromobox protein homolog 2 (isoform 2); chromobox homolog 2, chromo domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.57 E-value=23 Score=26.51 Aligned_cols=27 Identities=22% Similarity=0.590 Sum_probs=22.6
Q ss_pred hhhheeeEEecccCCCchhhhhhhhHHH
Q 020328 101 VAVGYGYVWWKGWKLPDMMFATRRSLSD 128 (327)
Q Consensus 101 GavGYgYmwWKGws~SDlMfVTKRnmsn 128 (327)
|.+=| ++.|||++-.|--|....||.+
T Consensus 24 g~~~Y-lVKWkGy~~~~~TWEp~~nl~~ 50 (74)
T 2d9u_A 24 GKLEY-LVKWRGWSSKHNSWEPEENILD 50 (74)
T ss_dssp TEEEE-EEEETTSCTTTCEEEEGGGCCC
T ss_pred CcEEE-EEEECCCCCccCccccHHHCCC
Confidence 33445 8999999999999999999987
No 202
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=24.50 E-value=1.1e+02 Score=29.87 Aligned_cols=27 Identities=7% Similarity=-0.007 Sum_probs=11.3
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 020328 146 AAQRQLSSKITSVDRDVNKIVEISQAT 172 (327)
Q Consensus 146 aaKrHLsqRId~vD~kLDeq~eis~~i 172 (327)
..-++|.+|++.++.+..++.+..+..
T Consensus 10 ~el~~~~~~~~~l~~~~~~~~~~~~~~ 36 (412)
T 3u06_A 10 TEVVHLRQRTEELLRCNEQQAAELETC 36 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444443333333
No 203
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=24.48 E-value=76 Score=26.86 Aligned_cols=55 Identities=13% Similarity=0.172 Sum_probs=32.8
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 020328 151 LSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDIT 214 (327)
Q Consensus 151 LsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~T 214 (327)
+.+-|++|.++||.|.- +..-...++|-+- +..+..=+..|+.+|.++-.+|.+.
T Consensus 8 ~K~Eiq~L~drLD~~~r-----Klaaa~~rgd~~~----i~qf~~E~~~l~k~I~~lk~~q~~~ 62 (123)
T 2lf0_A 8 EKNEIKRLSDRLDAIRH-----QQADLSLVEAADK----YAELEKEKATLEAEIARLREVHSQK 62 (123)
T ss_dssp HHHHHHHHHHHHHHHHH-----HHHHSCTTTCTTH----HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH-----HHHHHHhCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777777777632 2223334444333 3344555667778888888877653
No 204
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=24.47 E-value=14 Score=34.05 Aligned_cols=16 Identities=38% Similarity=0.518 Sum_probs=12.2
Q ss_pred ceeeeEcCcccceeecc
Q 020328 7 KLTFLVGAGILTSVLAK 23 (327)
Q Consensus 7 Kv~ILvGAG~~GSVl~k 23 (327)
||+|| |||++|+.+++
T Consensus 18 kilvl-GaG~vG~~~~~ 33 (365)
T 3abi_A 18 KVLIL-GAGNIGRAIAW 33 (365)
T ss_dssp EEEEE-CCSHHHHHHHH
T ss_pred EEEEE-CCCHHHHHHHH
Confidence 55555 99999998764
No 205
>1svf_B Protein (fusion glycoprotein); paramyxovirus, SV5, coiled-coil, viral protein; 1.40A {Simian virus 5} SCOP: h.3.2.1
Probab=24.16 E-value=52 Score=22.27 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=17.3
Q ss_pred HHhhhHHHHHHHHHHHHHHHH
Q 020328 133 VARQLEDVYSSISAAQRQLSS 153 (327)
Q Consensus 133 vtKqLeqVs~sLaaaKrHLsq 153 (327)
++.+|.++..+|..|+.||.+
T Consensus 10 IS~eL~~~n~sl~~A~~~l~~ 30 (38)
T 1svf_B 10 ISQNLAAVNKSLSDALQHLAQ 30 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 567888899999999988765
No 206
>1avo_B 11S regulator; proteasome activator, cell adhesion, interferon induction; 2.80A {Homo sapiens} SCOP: a.24.8.1
Probab=24.04 E-value=3.2e+02 Score=22.96 Aligned_cols=82 Identities=12% Similarity=0.083 Sum_probs=66.9
Q ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHH
Q 020328 124 RSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESK 203 (327)
Q Consensus 124 RnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~K 203 (327)
..+-...+.+-..+.++.+.+..-|.-++-+|-+..+==+==.++++.+-+++++++.....+.+.+..-+..-..+..|
T Consensus 6 ~~I~~l~~~vk~ei~~l~e~~~~vk~WI~l~IPkiEDGNNFGV~VQeevl~~l~~v~~~~~~~~~~i~~Y~~~Ra~~v~K 85 (140)
T 1avo_B 6 EKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTK 85 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556677788888888888888888888888877776666788999999999999999999988888888777777777
Q ss_pred HH
Q 020328 204 LI 205 (327)
Q Consensus 204 i~ 205 (327)
+.
T Consensus 86 ~~ 87 (140)
T 1avo_B 86 AA 87 (140)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 207
>1tqg_A Chemotaxis protein CHEA; histidine kinase, phosphotransfer, signal transduction, transferase; 0.98A {Thermotoga maritima} SCOP: a.24.10.3
Probab=23.82 E-value=2e+02 Score=21.65 Aligned_cols=38 Identities=21% Similarity=0.294 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 020328 168 ISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEI 207 (327)
Q Consensus 168 is~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~i 207 (327)
....+...+-.+++.-..+|. ..+..+...+|.-++.+
T Consensus 37 ~~~~l~r~~HtLKGsa~~~G~--~~l~~la~~lE~~l~~~ 74 (105)
T 1tqg_A 37 LINEAFRALHTLKGMAGTMGF--SSMAKLCHTLENILDKA 74 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHhcCh--HHHHHHHHHHHHHHHHH
Confidence 344455555556665555553 35556666666655544
No 208
>3c9i_A Tail needle protein GP26; xenon, coiled-coil, protein fiber, coiled coil, late protein, viral protein; 1.95A {Bacteriophage P22} PDB: 2poh_A
Probab=23.81 E-value=2.6e+02 Score=25.83 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 168 ISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 168 is~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
-.....--++.+.+|+....-+++.+...|.+.|.+|+.|+
T Consensus 106 ~ia~~e~Rit~~e~~i~~l~~~v~~ld~~vt~~et~Isal~ 146 (242)
T 3c9i_A 106 AITALNVRVTTAEGEIASLQTNVSALDGRVTTAENNISALQ 146 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhheeecccccchhhhhhhhhhcccccccccchhhhh
Confidence 33333344555555555555555555555555555555554
No 209
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=23.80 E-value=2.2e+02 Score=20.83 Aligned_cols=37 Identities=16% Similarity=0.103 Sum_probs=27.0
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhh
Q 020328 172 TQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIE 208 (327)
Q Consensus 172 ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie 208 (327)
.+..|..-..++.....++..++..+..|+..|+.+.
T Consensus 40 l~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 40 LSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3344555555566777888999999999999988764
No 210
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=23.70 E-value=1.3e+02 Score=21.46 Aligned_cols=34 Identities=15% Similarity=0.328 Sum_probs=19.9
Q ss_pred HHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 020328 176 VTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEG 209 (327)
Q Consensus 176 V~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~ 209 (327)
+..++.|--++..|-+++..++..|...|.++|.
T Consensus 12 iarlkkdnlqlerdeqnlekiianlrdeiarlen 45 (52)
T 3he5_B 12 IARLKKDNLQLERDEQNLEKIIANLRDEIARLEN 45 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHHH
Confidence 3333444445555666666677777777766664
No 211
>1mqm_B Hemagglutinin HA2 chain; influenza virus, viral protein; HET: NAG BMA MAN SIA GAL; 2.60A {Influenza a virus} SCOP: h.3.1.1 PDB: 1mql_B* 1mqn_B* 2l4g_A
Probab=23.65 E-value=24 Score=32.30 Aligned_cols=47 Identities=19% Similarity=0.290 Sum_probs=37.4
Q ss_pred hhhhhHHHHHHHHHhhhHHHHH-------HHHHHHHHHHHhhhhhhhhHHHHHH
Q 020328 121 ATRRSLSDACNSVARQLEDVYS-------SISAAQRQLSSKITSVDRDVNKIVE 167 (327)
Q Consensus 121 VTKRnmsnAv~svtKqLeqVs~-------sLaaaKrHLsqRId~vD~kLDeq~e 167 (327)
+-+++-..|.+.+++.|..+.+ ++...=.+|-+||++|++|+|+...
T Consensus 36 AD~kSTQ~AId~It~KlN~~iekmN~qfe~v~~ef~~~e~ri~~l~~~vdD~~~ 89 (221)
T 1mqm_B 36 ADLKSTQAAIDQINRKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKI 89 (221)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHSCCCEECSCCCCCCSSCCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5568889999999999888843 4555556788999999999998743
No 212
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=23.62 E-value=2.5e+02 Score=22.00 Aligned_cols=61 Identities=7% Similarity=0.040 Sum_probs=39.6
Q ss_pred HhhhHHHHHHHHHHHHHHHHhhhhhhh--hHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHH
Q 020328 134 ARQLEDVYSSISAAQRQLSSKITSVDR--DVNKIVEISQATQEEVTILRGRSKLIGDEFQSVR 194 (327)
Q Consensus 134 tKqLeqVs~sLaaaKrHLsqRId~vD~--kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~ 194 (327)
+.-++.--+-....-..++++|..+-. .-++-+.....++..+.++.+=|.++.-++.++.
T Consensus 14 SelFe~YE~df~~l~~~i~~kl~~i~~~~~~e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p 76 (102)
T 2qyw_A 14 SEHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLAEMEEELRYAP 76 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 445555555555555666666666522 2266667777888888888877777777777654
No 213
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=23.57 E-value=3.5e+02 Score=23.24 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHH---HHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHH
Q 020328 125 SLSDACNSVARQLEDVYSSISAAQR---QLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTL 200 (327)
Q Consensus 125 nmsnAv~svtKqLeqVs~sLaaaKr---HLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~L 200 (327)
...+-+..++.+|...-.--..|-| .|..-||++.++|+..++--+.|.+++...-.++..|..++..+..-|..|
T Consensus 74 ~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~L~~~Kek~~~i~~eLd~tl~el~~~~~~~~~~~~~~~~~ 152 (155)
T 2efr_A 74 KYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEMKQLEDKVEELLSKNYHLENEVARL 152 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHh
No 214
>1aq5_A Matrilin-1, CMP, cartilage matrix protein; coiled-coil, heptad repeat, interchain disulfide bonds, oligomerization domain, trimer; NMR {Gallus gallus} SCOP: h.1.6.1
Probab=23.52 E-value=1.3e+02 Score=21.58 Aligned_cols=9 Identities=11% Similarity=0.564 Sum_probs=3.8
Q ss_pred HHHhhhhhh
Q 020328 151 LSSKITSVD 159 (327)
Q Consensus 151 LsqRId~vD 159 (327)
+++|++.++
T Consensus 35 vt~rle~lE 43 (47)
T 1aq5_A 35 VAKRIEALE 43 (47)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344444443
No 215
>2d4y_A HAP1, flagellar HOOK-associated protein 1; multi-domain protein, alpha-helical bundle, complex all- beta folds, structural protein; 2.10A {Salmonella typhimurium}
Probab=23.37 E-value=4.9e+02 Score=24.95 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=23.2
Q ss_pred hhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhh
Q 020328 121 ATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITS 157 (327)
Q Consensus 121 VTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~ 157 (327)
+.|..+-..-..++.++.++++.|...++.+...|+.
T Consensus 64 ~~R~~vl~~a~~La~~~n~~~~~L~~~~~~~n~~i~~ 100 (463)
T 2d4y_A 64 AARQALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGS 100 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666666667777777776666666655543
No 216
>2h1e_A Chromo domain protein 1; CHD1, tandem chromodomains, three-stranded ANT B-sheet, hydrolase; 2.20A {Saccharomyces cerevisiae} PDB: 2dy7_A 2dy8_A
Probab=23.29 E-value=61 Score=28.10 Aligned_cols=27 Identities=11% Similarity=0.089 Sum_probs=22.6
Q ss_pred eeeEEecccCCCchhhhhhhhHHHHHHH
Q 020328 105 YGYVWWKGWKLPDMMFATRRSLSDACNS 132 (327)
Q Consensus 105 YgYmwWKGws~SDlMfVTKRnmsnAv~s 132 (327)
--|+.|||+|--+--|+|-.+|.+ |..
T Consensus 48 EYlVKWKg~Sy~HnTWe~ee~L~~-~~g 74 (177)
T 2h1e_A 48 EFLIKWTDESHLHNTWETYESIGQ-VRG 74 (177)
T ss_dssp EEEEEETTSCGGGCEEECHHHHCS-CTT
T ss_pred EEEEEECCCccccCeecCHHHHhh-chH
Confidence 447899999999999999999976 443
No 217
>3r4h_A Coiled coil helix CC-TET-PHI22; coiled coil domain, tetramer, KIH interactions, synthetic BI NOVO protein; HET: PHI; 2.70A {Synthetic}
Probab=23.16 E-value=53 Score=21.82 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=18.3
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHH
Q 020328 171 ATQEEVTILRGRSKLIGDEFQSVRD 195 (327)
Q Consensus 171 ~ik~eV~~v~~dls~ig~Dv~~v~~ 195 (327)
.|+.|+..++..+..|.+++..|++
T Consensus 6 aikqelaaikkelaaikfelaaikq 30 (34)
T 3r4h_A 6 AIKQELAAIKKELAAIKFELAAIKQ 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4667777777777888888777763
No 218
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=23.14 E-value=2.2e+02 Score=23.93 Aligned_cols=120 Identities=12% Similarity=0.153 Sum_probs=68.7
Q ss_pred hHHHHHHhhhcCCCCCCCcchhHHHHHHHHHHHH--HHhcC-CCceEEEeCCCCCCCCcchhhh-HHHhhhheeeEEecc
Q 020328 37 TLKIVSKLIKQDDPGPSDRKLFNDLLAEVSSVQQ--ELSHV-PRSVIIETSSGSGTGAKKYGVI-VVIVAVGYGYVWWKG 112 (327)
Q Consensus 37 alk~l~K~lk~~d~s~s~s~~~~dL~aQV~~Laq--Elr~L-sr~iTVvn~~ssg~gg~~y~l~-a~iGavGYgYmwWKG 112 (327)
.+++.+.-+++-++.|+ ....|.++.++|.+ +|+.. ..-...++++ . .| ....+ .++..+.-
T Consensus 16 ~L~~ql~El~~~~l~~g---E~eeLe~e~~rL~nae~l~~~~~~a~~~L~~~--e-~~-~~~~L~~a~~~L~~------- 81 (175)
T 4abx_A 16 LLAFQVQEISEVSPDPG---EEEGLNTELSRLSNLHTIAQAAAGGVELLSDG--D-LN-AAGLIGEAVRALNA------- 81 (175)
T ss_dssp HHHHHHHHHHHHCCCTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--S-SC-HHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHhCCCCCC---hHHHHHHHHHHHHCHHHHHHHHHHHHHHHhCC--c-ch-HHHHHHHHHHHHHH-------
Confidence 44555655665555553 12228888888876 34443 3333344433 1 12 22221 12222110
Q ss_pred cCCCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHH---HhhhhhhhhHHHHHHHHHHHH
Q 020328 113 WKLPDMMFATRRSLSDACNSVARQLEDVYSSISAAQRQLS---SKITSVDRDVNKIVEISQATQ 173 (327)
Q Consensus 113 ws~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLs---qRId~vD~kLDeq~eis~~ik 173 (327)
++++ .-.=..+.+.+.++--+|+.++..|...-.++. .|++.|..+|+....+.+--.
T Consensus 82 --l~~~-d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~rL~~ie~RL~~l~~L~RKyg 142 (175)
T 4abx_A 82 --GAKY-DETVMQLQNELRAALESVQAIAGELRDVAEGSAADPEALDRVEARLSALSKLKNKYG 142 (175)
T ss_dssp --HHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --HHHh-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 0000 122356888888888999999999988777774 688888888888877766443
No 219
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=23.10 E-value=47 Score=26.40 Aligned_cols=97 Identities=14% Similarity=0.243 Sum_probs=54.9
Q ss_pred eeeEEe-cccCCCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHH-HHHHHHHH-HHHHHhhc
Q 020328 105 YGYVWW-KGWKLPDMMFATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKI-VEISQATQ-EEVTILRG 181 (327)
Q Consensus 105 YgYmwW-KGws~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq-~eis~~ik-~eV~~v~~ 181 (327)
-.|.|| +||.|. .+.+.++..++.....=..+..||-.++.+-.-. .+..+... ++...-..
T Consensus 25 ~~~hw~v~g~~f~---------------~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~~ 89 (146)
T 1jig_A 25 HNYHWYVTGPHFF---------------TLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSVNEGTSKES 89 (146)
T ss_dssp HHHHHHCCSTTHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSCCC
T ss_pred hhhhhcccCcCHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCcCCCCCCCCC
Confidence 456777 888653 4677888888888888888899998888765432 12222110 01110011
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhH
Q 020328 182 RSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTL 216 (327)
Q Consensus 182 dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~ 216 (327)
-.+.+..+++..+.++..+..=++..+...|++..
T Consensus 90 ~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~ 124 (146)
T 1jig_A 90 AEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSA 124 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 22345555555555555555555555555555543
No 220
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=22.96 E-value=18 Score=31.48 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=11.6
Q ss_pred eeeEcCcccceeec
Q 020328 9 TFLVGAGILTSVLA 22 (327)
Q Consensus 9 ~ILvGAG~~GSVl~ 22 (327)
+++||||++|..++
T Consensus 5 V~IIGaG~~Gl~~A 18 (336)
T 1yvv_A 5 IAIIGTGIAGLSAA 18 (336)
T ss_dssp EEEECCSHHHHHHH
T ss_pred EEEECCcHHHHHHH
Confidence 68999999987654
No 221
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=22.87 E-value=2e+02 Score=29.42 Aligned_cols=52 Identities=13% Similarity=0.207 Sum_probs=24.6
Q ss_pred ccCCCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 020328 112 GWKLPDMMFATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVE 167 (327)
Q Consensus 112 Gws~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~e 167 (327)
|-..+|=.=-+.+.|.+-+.. ||.....-..--||=..=++..++.|++...
T Consensus 81 ~~~~pDPLsPgE~~~~~Kl~e----LE~e~k~d~~~~khn~~I~~k~g~~l~~v~~ 132 (526)
T 3iyk_A 81 GEEIPDPLSPGERGIQAKLKE----LEDEQRNELVRLKYNDKIKEKFGKELEEVYN 132 (526)
T ss_pred CCCCCCCCCHhHHHHHHHHHH----HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777666666666555532 3333333333333433334444444444433
No 222
>1xsv_A Hypothetical UPF0122 protein SAV1236; helix-turn-helix, putative DNA-binding protein, signal recognition particle, unknown function; 1.70A {Staphylococcus aureus subsp} SCOP: a.4.13.3
Probab=22.80 E-value=2.7e+02 Score=21.65 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=25.9
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhh
Q 020328 125 SLSDACNSVARQLEDVYSSISAAQRQLSSKITSV 158 (327)
Q Consensus 125 nmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~v 158 (327)
+..+....++-....|+..+..|+++|...+...
T Consensus 43 s~~EIA~~lgiS~~tV~~~l~ra~~kLr~~l~~~ 76 (113)
T 1xsv_A 43 SLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKL 76 (113)
T ss_dssp CHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666677777888889999999998887654
No 223
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=22.63 E-value=1.8e+02 Score=26.65 Aligned_cols=43 Identities=9% Similarity=0.136 Sum_probs=23.9
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhh
Q 020328 145 SAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIG 187 (327)
Q Consensus 145 aaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig 187 (327)
+..|+||+.|+..+-.++.....=-+.|++|-...+.-+.+.+
T Consensus 163 e~Ik~yLa~R~~~lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~ 205 (228)
T 3q0x_A 163 SVVKQFLAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCR 205 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666666666666555555555555554444433333
No 224
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=22.41 E-value=2.9e+02 Score=23.91 Aligned_cols=59 Identities=8% Similarity=0.199 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhhHHHHHHH--------HHHHHH---HHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchh
Q 020328 126 LSDACNSVARQLEDVYSSI--------SAAQRQ---LSSKITSVDRDVNKIVEISQATQEEVTILRGRSK 184 (327)
Q Consensus 126 msnAv~svtKqLeqVs~sL--------aaaKrH---LsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls 184 (327)
....++.+.+-||.++.+| +.||+. +..|.+.|...+.+-..+....+++|.+++.=+.
T Consensus 77 aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~~~~~~e~r~~~L~~ql~e~~~~l~~lq~ql~~LK~v~~ 146 (154)
T 2ocy_A 77 AEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILNKRLTEQLREKDTLLDTLTLQLKNLKKVMH 146 (154)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555554443 233322 3445555555555555555555555544444333
No 225
>2ieq_A S glycoprotein, spike glycoprotein, peplomer protein, E2; membrane fusion, virus entry, six-HEL bundle, viral protein; 1.75A {Human coronavirus}
Probab=22.28 E-value=2.9e+02 Score=22.86 Aligned_cols=101 Identities=14% Similarity=0.121 Sum_probs=0.0
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHH-HHHHHHHHHHHHHHHH
Q 020328 128 DACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEF-QSVRDIVQTLESKLIE 206 (327)
Q Consensus 128 nAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv-~~v~~~V~~Le~Ki~~ 206 (327)
.|...++.-+..|..+|..+.+-++-==..+.+=.|=..++.+.+.+=+....-....+..++ +-+++.--.|=.+|+.
T Consensus 1 ~a~~nit~a~~~~n~Ai~~~~~gf~tv~~Al~kiQdVVN~q~~aLs~ll~QLn~NF~A~s~~lq~~fn~t~lni~~elD~ 80 (109)
T 2ieq_A 1 KAINNIVASFSSVNDAITQTAEAIHTVTIALNKIQDVVNQQGSALNHLTSQLRHNFQSGGRGSGRGGNLTYLNLSSELKQ 80 (109)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------------CCCCCHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHhhhhHHHHHHHHHH
Q ss_pred hhhhhhhHhHHHHHHHHHHHhh
Q 020328 207 IEGKQDITTLGVKKLCDRAREL 228 (327)
Q Consensus 207 ie~kQd~Tn~GV~~LC~f~~~~ 228 (327)
+|.+-+--..=...|-+++..+
T Consensus 81 LEa~A~~l~~~~~elq~~idn~ 102 (109)
T 2ieq_A 81 LEAKTASLFQTTVELQGLIDQI 102 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
No 226
>4gip_D Fusion glycoprotein F1; PIV5, viral fusion protein, membrane fusion, protease cleava activated form, ectodomain, trimer; HET: NAG; 2.00A {Simian virus 5}
Probab=22.25 E-value=62 Score=32.12 Aligned_cols=52 Identities=17% Similarity=0.270 Sum_probs=19.8
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHH
Q 020328 132 SVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVR 194 (327)
Q Consensus 132 svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~ 194 (327)
+++..|..|..+|..|+++| |+.+.+-+.+++++.++-.++-.|..++..++
T Consensus 346 DIsteL~~vn~~L~~A~~~l-----------~~Sn~iL~svn~Ki~~~~~~~~~~~~~~~~~~ 397 (409)
T 4gip_D 346 DISQNLAAVNKSLSDALQHL-----------AQSDTYLSAIEDKIEEILSKIYHIENEIARIK 397 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHTC----------------------
T ss_pred chhhhHHHHHHHHHHHHHHH-----------HhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 57777888888877777765 44444444555555555555555555555444
No 227
>3qao_A LMO0526 protein, MERR-like transcriptional regulator; structural genomics, the center for structural genomics of I diseases, csgid; 1.87A {Listeria monocytogenes}
Probab=22.12 E-value=77 Score=28.48 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=15.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 020328 184 KLIGDEFQSVRDIVQTLESKLIEIEGKQDIT 214 (327)
Q Consensus 184 s~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~T 214 (327)
..+...++.++.++..|+.+|..++.+...+
T Consensus 86 ~~L~~~~~~L~~~~~~l~~~i~~~~~~~~~~ 116 (249)
T 3qao_A 86 HLLIEKKQRIETMLATLDLTIKNEKGEITMT 116 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 3344444555555555555555555544433
No 228
>2xz3_A Maltose ABC transporter periplasmic protein, ENVE glycoprotein; viral protein, viral membrane fusion, hairpin, chimera; HET: MAL; 1.95A {Escherichia coli} PDB: 1mg1_A*
Probab=22.03 E-value=1.4e+02 Score=28.01 Aligned_cols=54 Identities=11% Similarity=0.077 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHHHH
Q 020328 168 ISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCDRAR 226 (327)
Q Consensus 168 is~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~f~~ 226 (327)
+.+..++++.++.+-++.++.-+.++-.+|..=..-|+-+-.+|. ..-||-|+.
T Consensus 380 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 433 (463)
T 2xz3_A 380 LIHVLEQDQQRLITAINQTHYNLLNVASVVAQNRRGLDWLYIRLG-----FQSLCPTIN 433 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SCCHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHhC-----cCccchhhc
Confidence 345666667777777777777778877777666666677766654 335666664
No 229
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=22.02 E-value=1.6e+02 Score=23.43 Aligned_cols=18 Identities=17% Similarity=0.434 Sum_probs=9.4
Q ss_pred HHHHHHhhhhhhhhHHHH
Q 020328 148 QRQLSSKITSVDRDVNKI 165 (327)
Q Consensus 148 KrHLsqRId~vD~kLDeq 165 (327)
|+.|.++|+.+...+++-
T Consensus 17 kkkL~~Ki~el~~ei~ke 34 (98)
T 2ke4_A 17 RKRLQQQLEERSRELQKE 34 (98)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455555665555544443
No 230
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=22.02 E-value=3.5e+02 Score=26.11 Aligned_cols=22 Identities=9% Similarity=0.353 Sum_probs=13.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhhh
Q 020328 136 QLEDVYSSISAAQRQLSSKITS 157 (327)
Q Consensus 136 qLeqVs~sLaaaKrHLsqRId~ 157 (327)
.+.+-.+.|.+-+..+++.|..
T Consensus 39 ~~~~~~~~l~~~~n~~sk~i~~ 60 (421)
T 1ses_A 39 ELKKRLQEVQTERNQVAKRVPK 60 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3444456666666677777665
No 231
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=22.01 E-value=4e+02 Score=23.31 Aligned_cols=39 Identities=13% Similarity=0.236 Sum_probs=29.9
Q ss_pred hhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhh
Q 020328 121 ATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVD 159 (327)
Q Consensus 121 VTKRnmsnAv~svtKqLeqVs~sLaaaKrHLsqRId~vD 159 (327)
-.||.+.+....+.|.+...+..+..+|+..-++-...+
T Consensus 114 kerK~~~~~~~k~~k~~~~~~~~l~kaKk~Y~~~c~e~~ 152 (290)
T 3i2w_A 114 KERKDLEDLFKKAQKPWAKLLAKVEKAKADYHSACKTER 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445777788888888888999999999988776655433
No 232
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=21.92 E-value=2.7e+02 Score=21.33 Aligned_cols=38 Identities=5% Similarity=0.089 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHH
Q 020328 167 EISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKL 204 (327)
Q Consensus 167 eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki 204 (327)
+....+++++.+++..+..+...+..+..-+..|+.++
T Consensus 64 ~~i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~ 101 (112)
T 1l8d_A 64 ELLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEI 101 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444444444433
No 233
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=21.79 E-value=2.1e+02 Score=28.09 Aligned_cols=71 Identities=8% Similarity=0.053 Sum_probs=44.2
Q ss_pred HhhhhhhhhHHHHHHHHHHHHHHHHHhhcchh---hhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHH
Q 020328 153 SKITSVDRDVNKIVEISQATQEEVTILRGRSK---LIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCD 223 (327)
Q Consensus 153 qRId~vD~kLDeq~eis~~ik~eV~~v~~dls---~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~ 223 (327)
.+|-.+|.+--+...-.+..+.+-+.+...+. .-+.|.+.+..-+..|..+|..+|....-...-+..+..
T Consensus 31 ~~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (455)
T 2dq0_A 31 DEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYLW 104 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555445555544444444433 235677777788888888888888887777776666643
No 234
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=21.77 E-value=25 Score=32.59 Aligned_cols=14 Identities=29% Similarity=0.318 Sum_probs=11.2
Q ss_pred eeeEcCcccceeec
Q 020328 9 TFLVGAGILTSVLA 22 (327)
Q Consensus 9 ~ILvGAG~~GSVl~ 22 (327)
+|+||||++|-..+
T Consensus 13 VvIIGaGisGLsaA 26 (513)
T 4gde_A 13 VLVIGAGPTGLGAA 26 (513)
T ss_dssp EEEECCSHHHHHHH
T ss_pred EEEECCcHHHHHHH
Confidence 78999999886543
No 235
>2bez_C E2 glycoprotein; coiled coil, membrane fusion, severe acute respiratory syndrome, viral protein; 1.6A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1zv8_A 1zvb_A
Probab=21.73 E-value=2.9e+02 Score=21.60 Aligned_cols=21 Identities=10% Similarity=0.276 Sum_probs=11.9
Q ss_pred hHHHHHHHHHhhhHHHHHHHH
Q 020328 125 SLSDACNSVARQLEDVYSSIS 145 (327)
Q Consensus 125 nmsnAv~svtKqLeqVs~sLa 145 (327)
++.+|..+|.+.+..|+.+|.
T Consensus 13 sFN~A~~~i~~g~~tts~AL~ 33 (77)
T 2bez_C 13 QFNKAISQIQESLTTTSTALG 33 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666665555554
No 236
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=21.73 E-value=4.8e+02 Score=24.09 Aligned_cols=7 Identities=0% Similarity=-0.292 Sum_probs=3.5
Q ss_pred eccCCCC
Q 020328 21 LAKEGRL 27 (327)
Q Consensus 21 l~knGkL 27 (327)
.+.+|+.
T Consensus 45 ~y~~~~~ 51 (363)
T 2iub_A 45 NYSIEEF 51 (363)
T ss_dssp EECSSCE
T ss_pred EEcCCce
Confidence 3455554
No 237
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=21.64 E-value=1.3e+02 Score=21.41 Aligned_cols=31 Identities=13% Similarity=0.133 Sum_probs=23.9
Q ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 020328 149 RQLSSKITSVDRDVNKIVEISQATQEEVTIL 179 (327)
Q Consensus 149 rHLsqRId~vD~kLDeq~eis~~ik~eV~~v 179 (327)
..|...||+|.++|...++--+.|.+++.-.
T Consensus 15 ~KLek~ID~LEdeL~~eKek~~~i~~eLD~t 45 (52)
T 2z5i_A 15 ARLKKLVDDLEDELYAQKLKYKAISEELDHA 45 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4577888888888888888888887776443
No 238
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=21.39 E-value=3.3e+02 Score=22.05 Aligned_cols=66 Identities=11% Similarity=0.173 Sum_probs=0.0
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHH
Q 020328 128 DACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSV 193 (327)
Q Consensus 128 nAv~svtKqLeqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v 193 (327)
.|-.....-.+...+.|.+.|..|..+|..+..++++..+.......+=..+..+++....|++..
T Consensus 58 ~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rleeeee~~~~L~~~kkkle~e~~~Lk~~led~ 123 (129)
T 2fxo_A 58 QAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDIDDL 123 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 239
>4aj5_A SKA1, spindle and kinetochore-associated protein 1; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=21.32 E-value=3.2e+02 Score=21.95 Aligned_cols=45 Identities=29% Similarity=0.483 Sum_probs=36.6
Q ss_pred hhcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHHHHh
Q 020328 179 LRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCDRARE 227 (327)
Q Consensus 179 v~~dls~ig~Dv~~v~~~V~~Le~Ki~~ie~kQd~Tn~GV~~LC~f~~~ 227 (327)
.+.-+..||+|+=.|+.....||--+. .|.-++.-..-||.+.++
T Consensus 35 lk~~L~Kig~Ei~~l~eLLn~~E~eV~----~Qe~~~~sLKEL~~s~e~ 79 (91)
T 4aj5_A 35 LKTVLNKIGDEIIVINELLNKLELEIQ----YQEQTNNSLKELCESLEE 79 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 344578899999999988888887664 588899999999998864
No 240
>2wrg_I Hemagglutinin HA2 chain; viral protein, envelope protein, glycoprotein, lipoprotein; HET: NAG SIA GAL; 3.00A {Influenza a virus} PDB: 2wrh_I*
Probab=21.32 E-value=69 Score=29.38 Aligned_cols=46 Identities=15% Similarity=0.345 Sum_probs=36.5
Q ss_pred hhhhhHHHHHHHHHhhhHHHHHH-------HHHHHHHHHHhhhhhhhhHHHHH
Q 020328 121 ATRRSLSDACNSVARQLEDVYSS-------ISAAQRQLSSKITSVDRDVNKIV 166 (327)
Q Consensus 121 VTKRnmsnAv~svtKqLeqVs~s-------LaaaKrHLsqRId~vD~kLDeq~ 166 (327)
+-+++-..|.+.+++.|..|.+- +...=.++-+||++|++++|+..
T Consensus 36 AD~kSTQ~AId~It~KlN~liek~N~qf~~i~~EF~e~e~rI~~l~~~vdD~~ 88 (222)
T 2wrg_I 36 ADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNNLERRIENLNKKVDDGF 88 (222)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHTSCCCCSCCCCCCCTTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 45678899999999999888653 44445678899999999999875
No 241
>3c98_B Syntaxin-1A; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus}
Probab=21.28 E-value=3.7e+02 Score=22.63 Aligned_cols=21 Identities=0% Similarity=0.246 Sum_probs=11.7
Q ss_pred HHHHHHHhhhHHHHHHHHHHH
Q 020328 128 DACNSVARQLEDVYSSISAAQ 148 (327)
Q Consensus 128 nAv~svtKqLeqVs~sLaaaK 148 (327)
+-|..+...+++++..+...+
T Consensus 47 ~~ve~i~~~i~~i~~~v~el~ 67 (279)
T 3c98_B 47 EQVEEIRGFIDKIAENVEEVK 67 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666666555443
No 242
>3lwe_A M-phase phosphoprotein 8; MPP8, structural genomics, structural genomics consortium, S repeat, nucleus, cell cycle; 2.05A {Homo sapiens} SCOP: b.34.13.0 PDB: 3r93_A* 3svm_A* 3qo2_A*
Probab=21.22 E-value=29 Score=25.08 Aligned_cols=40 Identities=23% Similarity=0.322 Sum_probs=27.6
Q ss_pred eeeEEecccCCCchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHH
Q 020328 105 YGYVWWKGWKLPDMMFATRRSLSDACNSVARQLEDVYSSISAAQ 148 (327)
Q Consensus 105 YgYmwWKGws~SDlMfVTKRnmsnAv~svtKqLeqVs~sLaaaK 148 (327)
+-++.|||+.-+|--+-...||.++-. -|++.....+..|
T Consensus 21 ~YlVkWkGy~~~~~TWEp~~nl~~~~~----li~~f~~~~~~~k 60 (62)
T 3lwe_A 21 LYKVRWKGYTSDDDTWEPEIHLEDCKE----VLLEFRKKIAENK 60 (62)
T ss_dssp EEEEEETTSCGGGCEEEEHHHHTTCHH----HHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCcCCCeeeHhHhhccHH----HHHHHHHhhHhhc
Confidence 346899999988999999999976443 3444444444444
No 243
>3p8q_A GP5, head protein; virus procapsid particles, virus; 5.20A {Enterobacteria phage HK97} PDB: 3qpr_A
Probab=21.00 E-value=20 Score=33.87 Aligned_cols=63 Identities=14% Similarity=0.221 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 020328 138 EDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEI 207 (327)
Q Consensus 138 eqVs~sLaaaKrHLsqRId~vD~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~~Le~Ki~~i 207 (327)
.++.++|..+-+++.+.-|.--.++++-.++...++++| .++..+++.++.-+..||.|+.+.
T Consensus 5 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~ 67 (385)
T 3p8q_A 5 ALIQKAIEESQQKMTQLFDAQKAEIESTGQVSKQLQSDL-------MKVQEELTKSGTRLFDLEQKLASG 67 (385)
T ss_dssp ----------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhccc
Confidence 333444444444444333333333333334455555555 555556666666666677776655
No 244
>3kpe_A Fusion glycoprotein F0; peptide-small-molecule complex, alpha helix, coiled-coil, EN protein, fusion protein; HET: TM3 PG4; 1.47A {Human respiratory syncytial virus} PDB: 1g2c_A
Probab=20.88 E-value=2e+02 Score=20.86 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=24.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHH
Q 020328 159 DRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQ 198 (327)
Q Consensus 159 D~kLDeq~eis~~ik~eV~~v~~dls~ig~Dv~~v~~~V~ 198 (327)
+.++...++-.+.|-+-|.++...++.+.-=++.+|+-+.
T Consensus 3 e~~I~~Lk~ai~~TNeAV~~L~~g~~~la~Av~~iQ~~IN 42 (51)
T 3kpe_A 3 EGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYID 42 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555566666677777776777766666665543
No 245
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=20.72 E-value=1.5e+02 Score=21.27 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=13.6
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHHHHHHhhcc
Q 020328 151 LSSKITSVDRDVNKIVEISQATQEEVTILRGR 182 (327)
Q Consensus 151 LsqRId~vD~kLDeq~eis~~ik~eV~~v~~d 182 (327)
|..+++.+..+=....+.-+.-++++..+++.
T Consensus 14 l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkee 45 (51)
T 3m91_A 14 LEARIDSLAARNSKLMETLKEARQQLLALREE 45 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444333
No 246
>3zrx_A AF1503 protein, osmolarity sensor protein ENVZ; signaling protein, osmoregulation, OMPR, OMPC; 1.25A {Archaeoglobus fulgidus} PDB: 3zrv_A 3zrw_A 3zrw_B 2lfs_A 2lfr_A 1joy_A 2l7i_A 2y20_A 2l7h_A 2y21_A 2y0t_A 2y0q_A
Probab=20.69 E-value=2.2e+02 Score=19.80 Aligned_cols=17 Identities=18% Similarity=0.255 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHhhcchh
Q 020328 168 ISQATQEEVTILRGRSK 184 (327)
Q Consensus 168 is~~ik~eV~~v~~dls 184 (327)
++..++.-++.+...++
T Consensus 67 ~shel~~~l~~i~~~~~ 83 (115)
T 3zrx_A 67 VSHDLRTPLTRIRLATE 83 (115)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHH
Confidence 33333333333333333
No 247
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=20.58 E-value=3.6e+02 Score=23.35 Aligned_cols=24 Identities=13% Similarity=0.062 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHhhcchhhhhhHH
Q 020328 167 EISQATQEEVTILRGRSKLIGDEF 190 (327)
Q Consensus 167 eis~~ik~eV~~v~~dls~ig~Dv 190 (327)
++.+.++.++.++|..|+-+.+|+
T Consensus 99 ~lr~~l~kdlEelr~kL~P~~eEL 122 (191)
T 1nfn_A 99 AAQARLGADMEDVCGRLVQYRGEV 122 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHH
Confidence 444455666666666666655554
No 248
>1urq_A M-tomosyn isoform; transport protein, tomosyn-snare complex, exocytosis, four helical bundle, coiled coil; 2.0A {Rattus norvegicus} SCOP: h.1.15.1
Probab=20.58 E-value=2.6e+02 Score=20.53 Aligned_cols=30 Identities=13% Similarity=0.159 Sum_probs=21.0
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHhhhhhh
Q 020328 130 CNSVARQLEDVYSSISAAQRQLSSKITSVD 159 (327)
Q Consensus 130 v~svtKqLeqVs~sLaaaKrHLsqRId~vD 159 (327)
.+.|-.|++.|.+.+..+...+..|-++|+
T Consensus 6 i~~v~~qv~ev~~iM~~ni~kvlERGekL~ 35 (63)
T 1urq_A 6 IEGVKGAASGVVGELARARLALDERGQKLS 35 (63)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667777777777777777777766554
No 249
>1lwu_A Fibrinogen alpha-1 chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: h.1.8.1 PDB: 1n73_A*
Probab=20.39 E-value=1.1e+02 Score=25.73 Aligned_cols=28 Identities=21% Similarity=0.372 Sum_probs=18.5
Q ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHHHH
Q 020328 149 RQLSSKITSVDRDVNKIVEISQATQEEV 176 (327)
Q Consensus 149 rHLsqRId~vD~kLDeq~eis~~ik~eV 176 (327)
..|-.||+.|-.|+++|..-....++.|
T Consensus 25 edLrrrIe~LkrKV~~Qvq~i~~Lq~nV 52 (119)
T 1lwu_A 25 RELERRIIHLQRRINMQLQQLTLLQHNI 52 (119)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566788888887777766555554444
No 250
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=20.18 E-value=1.3e+02 Score=24.27 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=3.1
Q ss_pred HHHHhhhhhhhhHHHH
Q 020328 150 QLSSKITSVDRDVNKI 165 (327)
Q Consensus 150 HLsqRId~vD~kLDeq 165 (327)
+|+..|+.+...++..
T Consensus 3 ~l~~~~~~l~~~~~~~ 18 (182)
T 3kqg_A 3 TLNAQIPELKSDLEKA 18 (182)
T ss_dssp ----------CHHHHH
T ss_pred chhhhHHHHHHHHHHH
Confidence 3455555555555544
No 251
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=20.14 E-value=1.6e+02 Score=25.49 Aligned_cols=28 Identities=4% Similarity=0.036 Sum_probs=12.6
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHH
Q 020328 147 AQRQLSSKITSVDRDVNKIVEISQATQE 174 (327)
Q Consensus 147 aKrHLsqRId~vD~kLDeq~eis~~ik~ 174 (327)
.+..|.++++.++.++++.+++.+.+++
T Consensus 80 ~~~~l~~~~~~l~~~i~~l~~~~~~l~~ 107 (278)
T 1r8e_A 80 LFAFYTEQERQIREKLDFLSALEQTISL 107 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444433
Done!