Query 020331
Match_columns 327
No_of_seqs 258 out of 1399
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 15:17:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020331.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020331hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dnh_A Uncharacterized protein 100.0 1.5E-52 5.2E-57 388.9 23.7 225 87-325 27-257 (258)
2 2arz_A Hypothetical protein PA 100.0 1.9E-51 6.7E-56 378.0 24.7 229 86-326 6-240 (247)
3 1xhn_A CREG, cellular represso 100.0 3.9E-30 1.3E-34 226.6 16.5 151 82-238 13-183 (184)
4 3gas_A Heme oxygenase; FMN-bin 100.0 3.9E-29 1.3E-33 231.5 16.3 143 88-237 87-239 (259)
5 3swj_A CHUZ, putative uncharac 100.0 8.7E-29 3E-33 228.4 16.6 159 72-237 71-239 (251)
6 3tgv_A Heme-binding protein HU 99.9 1.5E-27 5.1E-32 203.3 14.7 128 90-220 5-140 (148)
7 1vl7_A Hypothetical protein AL 99.9 2.5E-24 8.6E-29 184.3 14.3 135 84-220 15-157 (157)
8 3gas_A Heme oxygenase; FMN-bin 99.7 1.1E-17 3.6E-22 154.8 9.2 78 246-326 3-81 (259)
9 2asf_A Hypothetical protein RV 99.7 9.6E-16 3.3E-20 127.6 16.7 118 90-216 12-131 (137)
10 3swj_A CHUZ, putative uncharac 99.7 3.5E-17 1.2E-21 150.7 7.9 77 246-326 4-81 (251)
11 2iab_A Hypothetical protein; N 99.7 7.3E-16 2.5E-20 131.5 15.0 120 90-217 15-136 (155)
12 2hq7_A Protein, related to gen 99.7 9.2E-16 3.2E-20 128.2 13.8 126 89-221 8-136 (146)
13 3f7e_A Pyridoxamine 5'-phospha 99.7 1.1E-15 3.9E-20 126.1 13.6 119 90-213 6-127 (131)
14 3ec6_A General stress protein 99.7 2E-15 6.9E-20 125.9 14.8 126 88-219 4-130 (139)
15 1rfe_A Hypothetical protein RV 99.6 3.6E-15 1.2E-19 126.9 16.1 133 80-216 4-145 (162)
16 3db0_A LIN2891 protein; putati 99.6 1.8E-15 6.3E-20 124.0 12.6 120 89-216 7-127 (128)
17 2i02_A General stress protein 99.6 6.4E-15 2.2E-19 123.7 15.4 123 89-218 12-138 (148)
18 2fhq_A Putative general stress 99.6 5.3E-15 1.8E-19 122.9 14.2 122 89-220 10-134 (141)
19 2re7_A Uncharacterized protein 99.6 2E-14 6.9E-19 118.6 16.5 123 88-217 7-133 (134)
20 2fg9_A 5-nitroimidazole antibi 99.6 1E-14 3.5E-19 127.2 11.6 136 76-214 15-167 (178)
21 2hhz_A Pyridoxamine 5'-phospha 99.6 8.5E-14 2.9E-18 117.4 16.8 122 89-217 4-129 (150)
22 2hti_A BH0577 protein; structu 99.6 8.1E-14 2.8E-18 122.0 16.5 134 77-214 3-161 (185)
23 3u5w_A Putative uncharacterize 99.6 9.7E-14 3.3E-18 117.6 16.2 119 88-213 11-143 (148)
24 2aq6_A Pyridoxine 5'-phosphate 99.5 2.2E-13 7.4E-18 113.8 15.8 123 89-216 7-143 (147)
25 2ig6_A NIMC/NIMA family protei 99.5 8.5E-14 2.9E-18 118.2 12.2 121 87-217 18-141 (150)
26 3dmb_A Putative general stress 99.5 4.1E-13 1.4E-17 113.4 15.7 124 89-220 9-136 (147)
27 3u35_A General stress protein; 99.5 3.6E-13 1.2E-17 118.2 12.9 138 89-234 28-173 (182)
28 2hq9_A MLL6688 protein; struct 99.5 1.3E-12 4.3E-17 110.1 15.3 120 89-213 9-143 (149)
29 2qea_A Putative general stress 99.5 7.5E-13 2.6E-17 113.3 13.1 120 89-218 6-130 (160)
30 3fkh_A Putative pyridoxamine 5 99.4 2.6E-12 8.7E-17 107.9 15.2 115 88-213 10-125 (138)
31 2fur_A Hypothetical protein; s 99.4 8.3E-13 2.8E-17 118.0 12.2 133 77-214 10-162 (209)
32 3cp3_A Uncharacterized protein 99.4 8.1E-12 2.8E-16 105.3 14.7 118 87-214 15-136 (148)
33 2htd_A Predicted flavin-nucleo 99.4 1.5E-11 5.1E-16 103.0 14.9 108 89-213 29-139 (140)
34 2vpa_A NIMA-related protein; c 99.3 3.7E-12 1.3E-16 114.6 7.9 128 87-215 43-194 (216)
35 2q9k_A Uncharacterized protein 99.3 4.6E-11 1.6E-15 101.6 13.6 103 90-216 12-117 (151)
36 1dnl_A Pyridoxine 5'-phosphate 99.3 4.9E-11 1.7E-15 105.9 13.2 119 93-217 25-174 (199)
37 3ba3_A Protein LP_0091, pyrido 99.2 3.4E-10 1.2E-14 95.7 13.4 127 89-219 4-136 (145)
38 1nrg_A Pyridoxine 5'-phosphate 99.1 4.3E-10 1.5E-14 103.8 13.7 118 96-219 75-223 (261)
39 1ty9_A Phenazine biosynthesis 99.1 2.3E-09 8E-14 96.7 16.6 116 94-218 51-198 (222)
40 1ci0_A Protein (PNP oxidase); 99.1 4.4E-09 1.5E-13 95.3 16.1 118 96-218 52-202 (228)
41 2a2j_A Pyridoxamine 5'-phospha 99.0 6.5E-09 2.2E-13 95.1 13.9 115 96-217 77-223 (246)
42 2i51_A Uncharacterized conserv 99.0 9.3E-09 3.2E-13 90.8 13.5 116 99-219 24-172 (195)
43 2ol5_A PAI 2 protein; structur 98.9 8.2E-09 2.8E-13 91.7 12.7 121 89-213 12-161 (202)
44 2ou5_A Pyridoxamine 5'-phospha 98.9 6.6E-09 2.3E-13 90.3 11.1 115 99-219 29-156 (175)
45 3r5l_A Deazaflavin-dependent n 98.3 9.9E-06 3.4E-10 66.2 12.5 102 97-209 13-122 (122)
46 3a6r_A FMN-binding protein; el 98.3 2.7E-05 9.2E-10 63.6 14.2 108 90-214 4-120 (122)
47 3in6_A FMN-binding protein; st 98.3 2.2E-05 7.7E-10 66.0 14.1 121 89-216 19-144 (148)
48 3h96_A F420-H2 dependent reduc 97.8 0.00012 4.2E-09 61.3 9.8 105 96-210 27-143 (143)
49 3r5y_A Putative uncharacterize 97.7 0.00019 6.5E-09 60.4 9.7 101 98-209 38-146 (147)
50 3r5z_A Putative uncharacterize 97.7 0.00031 1.1E-08 59.0 10.3 101 98-209 36-144 (145)
51 2ptf_A Uncharacterized protein 59.6 22 0.00074 31.5 7.0 54 101-157 37-91 (233)
52 3e4v_A NADH:FMN oxidoreductase 51.2 25 0.00087 29.5 5.8 66 90-157 9-77 (186)
53 2iml_A Hypothetical protein; F 46.7 44 0.0015 28.7 6.7 55 101-157 16-71 (199)
54 3b5m_A Uncharacterized protein 37.9 36 0.0012 29.2 4.7 55 101-157 6-66 (205)
55 2nr4_A Conserved hypothetical 32.7 76 0.0026 27.4 6.0 54 100-157 30-83 (213)
56 1eje_A FMN-binding protein; st 31.0 52 0.0018 27.6 4.5 67 90-158 18-87 (192)
57 3fge_A Putative flavin reducta 30.5 98 0.0033 26.2 6.3 65 91-158 16-91 (203)
58 3bpk_A Nitrilotriacetate monoo 30.1 1.7E+02 0.0059 24.5 7.8 71 86-158 12-92 (206)
59 1yoa_A Putative flavoprotein; 27.7 1.8E+02 0.0061 23.2 7.2 66 90-158 4-74 (159)
60 3hmz_A Flavin reductase domain 23.8 47 0.0016 28.2 2.9 64 90-157 20-87 (199)
61 2d9r_A Conserved hypothetical 22.8 2.6E+02 0.0088 21.3 6.8 59 91-155 44-102 (104)
62 4hx6_A Oxidoreductase; structu 20.1 2.6E+02 0.0089 23.1 6.9 70 87-158 18-90 (185)
No 1
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.5e-52 Score=388.93 Aligned_cols=225 Identities=19% Similarity=0.299 Sum_probs=207.3
Q ss_pred CcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCC--CCCcce
Q 020331 87 PPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDP--EDRTDL 164 (327)
Q Consensus 87 s~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~--~~~~~~ 164 (327)
..++++|+||+++++|+|||++ ..+|.|++|+|+|++|++|.+||+++.+++|++||++||||||+|.+++ ++..++
T Consensus 27 ~~~~~ar~lL~~~~~g~LaTv~-~~dG~P~~s~v~y~~d~~g~~~~~~s~~~~h~~NL~~dprvSl~V~~~~~~d~~~~~ 105 (258)
T 3dnh_A 27 EAVRVARDVLHTSRTAALATLD-PVSGYPYTTATNIGIEPDGTPFFFAAGLTLHARNMETDARISVTLAPFGKGDALTLP 105 (258)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEC-TTTCCEEEEEEECEECTTSCEEEEEETTSHHHHHHHHCCEEEEEECCGGGSCGGGSC
T ss_pred HHHHHHHHHHHhCCEEEEEecc-CCCCceEEEEEEEEECCCCCEEEEEeCCcHHHHHHhhCCCEEEEEecCCCCChhhCC
Confidence 4678999999999999999996 2589999999999999889999999999999999999999999999876 567889
Q ss_pred EEEEEEEEEEecchhHHHHHHHHHHhCCCC-ccccCCCeEEEEEEEeEEEEEecCcc-cccCCccCChhhhhc--ccCCc
Q 020331 165 VITLHGDATSVAEKDKAAIRAVYLAKHPNA-FWVDFGDFQFMRIEPKAVRYVSGVAT-ALLGSGEFSKEEYQA--ANVDP 240 (327)
Q Consensus 165 rvtl~G~a~~v~~ee~~~l~~~y~~~~P~~-~~~~~~df~l~rL~p~~v~~v~GFG~-a~~~~~~v~~~e~~~--A~pDp 240 (327)
||+|+|+++.+++++.++++++|.++||++ .|.+++||.||||+|++++|++|||+ + +||+++||.+ |.|||
T Consensus 106 rvtl~G~a~~v~~~e~~~l~~~y~~rhP~a~~~~~~~df~l~rl~~~~v~~v~GFG~~a----~~v~~~d~~~~~a~~d~ 181 (258)
T 3dnh_A 106 RLTLVGRADRIGPDEVPLAIARYIARYPKAKLYLSLPDTRLYRLRTEGVQINGGPARNA----SNITPADLRTDLSGAEE 181 (258)
T ss_dssp EEEEEEEEEECCGGGHHHHHHHHHHHCTTHHHHTSSTTEEEEEEEEEEEEEEC----------CCCCHHHHSCCCTTCHH
T ss_pred eEEEEEEEEEcCchHHHHHHHHHHHHCcChHHcccCCCeEEEEEEEeEEEEEcccCccc----ccCCHHHhcccCCCCch
Confidence 999999999999888889999999999998 89999999999999999999999999 9 8999999999 88999
Q ss_pred ccccchhhHhhhhhcCHHHHHHHHHHhCCCCCCcEEEEEeeCCCcEEEEcccCCeEEEEEcCCCCCCCHhHHHHHHHHHH
Q 020331 241 IAQFSKPVASHMNRDHAEDTRIIVQHSTSIPVASAYMLDLDSLGFNVKAGYQGNTFKLRIPFPRRAEDRKDVKILIVEML 320 (327)
Q Consensus 241 la~~~~~ii~HMN~dH~d~l~~~~~~~~~~~~~~a~m~~vD~~G~~lr~~~~~~~~~~RipF~~pv~~~~e~r~~Lv~m~ 320 (327)
|+..+++||+|||+|| |++..||+ |+++++++|+|++||++||+|+++. ..+||||+ +|.+++|++|++|+
T Consensus 182 l~~~~~~ii~hmN~dH-d~l~~~~~-~~~~~~~~a~~~~vD~~G~dl~~~~----~~~Ri~F~---~d~~~~r~~lv~m~ 252 (258)
T 3dnh_A 182 LMAAAESEATRLNAIK-GEASRLAV-LAGAKTGRWKITSIDPDGIDLASAS----DLARLWFA---ERVETLKQFEKALA 252 (258)
T ss_dssp HHHHHHHHHHHHHTST-THHHHHHH-HTTCCCSSCEEEEEETTEEEEECSS----CEEEEECS---SCCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhH-HHHHHHHH-hCCCCCCcEEEEEEccCcCEEEECC----EEEEeeCC---CCHHHHHHHHHHHH
Confidence 9999999999999999 99999999 9998889999999999999999852 69999999 99999999999999
Q ss_pred HHhhc
Q 020331 321 QAANS 325 (327)
Q Consensus 321 ~~A~~ 325 (327)
++|++
T Consensus 253 ~~ar~ 257 (258)
T 3dnh_A 253 QLLKG 257 (258)
T ss_dssp HHTC-
T ss_pred HHhhc
Confidence 99985
No 2
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=100.00 E-value=1.9e-51 Score=377.99 Aligned_cols=229 Identities=28% Similarity=0.455 Sum_probs=214.4
Q ss_pred CCcHHHHHHHHhcCCeEEEEeecCCC--CCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCC--CCC
Q 020331 86 LPPLEEIRTVLDRSVRGMLSTFSQKY--EGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDP--EDR 161 (327)
Q Consensus 86 ps~ae~ar~lL~~~~~~~LATv~~~~--dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~--~~~ 161 (327)
++.++++++||+++++|+|||++ . +|.|++++++|+++++|.+||+++..++|++||++||||||+|.+++ ++.
T Consensus 6 ~~~~~~~r~ll~~~~~~~LaT~~--~~~dG~P~~s~v~~~~d~~g~~~f~~s~~s~k~~nl~~nprvsl~v~~~~~~~~~ 83 (247)
T 2arz_A 6 VEAAKNARELLLKEYRAVLSTHS--KKWPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQ 83 (247)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEEC--SSSTTCEEEEEEECEECTTSCEEEEEETTSHHHHHHHHCCEEEEEEECTTCSSTT
T ss_pred hHHHHHHHHHHHhCCEEEEEEcC--CCCCCcceEEEEEEEECCCCCEEEEEeChhHHHHHHHhCCCeEEEEecCCCCChh
Confidence 44678999999999999999997 5 89999999999999889999999999999999999999999998776 567
Q ss_pred cceEEEEEEEEEEecchhHHHHHHHHHHhCCCC-ccccCCCeEEEEEEEeEEEEEecCcccccCCccCChhhhhcccCCc
Q 020331 162 TDLVITLHGDATSVAEKDKAAIRAVYLAKHPNA-FWVDFGDFQFMRIEPKAVRYVSGVATALLGSGEFSKEEYQAANVDP 240 (327)
Q Consensus 162 ~~~rvtl~G~a~~v~~ee~~~l~~~y~~~~P~~-~~~~~~df~l~rL~p~~v~~v~GFG~a~~~~~~v~~~e~~~A~pDp 240 (327)
.+.+|+|+|+++.+++++.+.+.++|.++||+. .|.+.++|.+|+|+|++++|++|||++ +||+++||.+| ||
T Consensus 84 ~~~~v~l~G~a~~v~d~e~~~~~~~~~~~~P~~~~~~~~~~~~l~rl~~~~~~~~~gfG~~----~~v~~~~~~~a--dp 157 (247)
T 2arz_A 84 AVGRLTLLAEARQLAEEEVAAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAI----HWLAAERVPLA--NP 157 (247)
T ss_dssp SSCEEEEEEEEEECCHHHHHHHHHHHHHHCGGGTTCBTTBBEEEEEEEEEEEEEECTTCCE----EEEETTTSCCC--CT
T ss_pred hCceEEEEEEEEECCcHHHHHHHHHHHHHCcChhhcccccCcEEEEEEEEEEEEEcCCCce----EEeChhhhccc--hh
Confidence 788999999999999876778999999999998 788889999999999999999999999 88999999988 99
Q ss_pred ccc-cchhhHhhhhhcCHHHHHHHHHHhCCCCCCcEEEEEeeCCCcEEEEcccCCeEEEEEcCCCCCCCHhHHHHHHHHH
Q 020331 241 IAQ-FSKPVASHMNRDHAEDTRIIVQHSTSIPVASAYMLDLDSLGFNVKAGYQGNTFKLRIPFPRRAEDRKDVKILIVEM 319 (327)
Q Consensus 241 la~-~~~~ii~HMN~dH~d~l~~~~~~~~~~~~~~a~m~~vD~~G~~lr~~~~~~~~~~RipF~~pv~~~~e~r~~Lv~m 319 (327)
|+. .+++||+|||+||.+++..||++|++++...|+|++||++||+|+++. ..+||||++|+++.+++|.+|++|
T Consensus 158 ~~~~~~~~ii~hmN~dH~~~l~~~~~~~~~~~~~~~~~~~iD~~G~~l~~~~----~~~Ri~F~~~~~~~~~~~~~l~~m 233 (247)
T 2arz_A 158 FAGEAERGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQ----GLHWLPFPAACGNPGAVRQALVQL 233 (247)
T ss_dssp TTTHHHHHHHHHHHHHCHHHHHHHHHHHCCCCSSCCEEEEECSSEEEEEETT----EEEEEECSSCCCSHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhCCCCccceEEEEEccCCCEEEECC----EEEEEeCCCcCCCHHHHHHHHHHH
Confidence 999 999999999999999999999999998878899999999999999962 689999999999999999999999
Q ss_pred HHHhhcC
Q 020331 320 LQAANSH 326 (327)
Q Consensus 320 ~~~A~~~ 326 (327)
++.|++.
T Consensus 234 ~~~a~~~ 240 (247)
T 2arz_A 234 ARAERWP 240 (247)
T ss_dssp HHCSSCC
T ss_pred HHHhHhh
Confidence 9999854
No 3
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=99.97 E-value=3.9e-30 Score=226.56 Aligned_cols=151 Identities=21% Similarity=0.321 Sum_probs=136.9
Q ss_pred hhcCCCcHHHHHHHHhcCCeEEEEeecCCC----CCcceEEEeeEEE----cCCCcEEEEecCCchHHHhhhhCCceEEE
Q 020331 82 AAARLPPLEEIRTVLDRSVRGMLSTFSQKY----EGYPSGSMVDFAC----DADGTPILAVSSLAVHTKDLLANPKCSLL 153 (327)
Q Consensus 82 ~~~rps~ae~ar~lL~~~~~~~LATv~~~~----dG~P~~S~v~y~~----d~~G~~~~~vs~~s~htrNL~~dprvSL~ 153 (327)
-+.++..++++|+||+++++|+|||++ . +|+|++|+++|+. +++|.+||+++..+.|++||++||||||+
T Consensus 13 ~~~~~~~~~~ar~ll~~~~~g~LaTi~--~~~~~dG~P~~s~v~~~~~~~~d~~g~~~f~~s~~~~~~~nl~~nprvSl~ 90 (184)
T 1xhn_A 13 LPPREDAARVARFVTHVSDWGALATIS--TLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLT 90 (184)
T ss_dssp CCCTTCHHHHHHHHHHHCSEEEEEEEC--CCGGGTTCEEEEEEECBSCSTTCCCSCCEEEECTTSHHHHHHHHCCEEEEE
T ss_pred CCCChHHHHHHHHHHHhCCEEEEEecc--cCCCCCCcceEEEEEEEeccCcCCCCCEEEEEeCccHhHHHHhhCCCEEEE
Confidence 345678899999999999999999997 4 8999999999998 77799999999999999999999999999
Q ss_pred EeeCC---------CCCc--ceEEEEEEEEEEecchhHHHHHHHHHHhCCCC-ccccCCCeEEEEEEEeEEEEEecCccc
Q 020331 154 VARDP---------EDRT--DLVITLHGDATSVAEKDKAAIRAVYLAKHPNA-FWVDFGDFQFMRIEPKAVRYVSGVATA 221 (327)
Q Consensus 154 V~~~~---------~~~~--~~rvtl~G~a~~v~~ee~~~l~~~y~~~~P~~-~~~~~~df~l~rL~p~~v~~v~GFG~a 221 (327)
|.+++ ++.. ++||+|.|+++.+++++..+++++|.++||++ .|.+.++|.||+|+|+++++++|||++
T Consensus 91 v~~~~~~~~~~~~~dp~~~~~~rvtl~G~a~~v~d~e~~~~~~~~~~~hP~~~~~~~~~~~~~~~l~i~~i~~v~gFG~~ 170 (184)
T 1xhn_A 91 MTLAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNETEMDIAKHSLFIRHPEMKTWPSSHNWFFAKLNITNIWVLDYFGGP 170 (184)
T ss_dssp EEGGGTTHHHHHTCCTTSTTSCEEEEEEEEEECCGGGHHHHHHHHHHHCGGGGGSCGGGCCEEEEEEEEEEEEECSSSSC
T ss_pred EecCCCccccccCCCCccccCceEEEEEEEEECChHHHHHHHHHHHHHCcChhHcccCCCEEEEEEEEeEEEEEccCCce
Confidence 99643 3344 78999999999999878888999999999998 788899999999999999999999999
Q ss_pred ccCCccCChhhhhcccC
Q 020331 222 LLGSGEFSKEEYQAANV 238 (327)
Q Consensus 222 ~~~~~~v~~~e~~~A~p 238 (327)
+||+++||.+|.+
T Consensus 171 ----~~v~~~~~~~a~~ 183 (184)
T 1xhn_A 171 ----KIVTPEEYYNVTV 183 (184)
T ss_dssp ----EECCHHHHHHCC-
T ss_pred ----EEeCHHHHhhccC
Confidence 8899999998875
No 4
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=99.96 E-value=3.9e-29 Score=231.54 Aligned_cols=143 Identities=16% Similarity=0.176 Sum_probs=131.9
Q ss_pred cHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCC-ceEEEEeeCC----CCCc
Q 020331 88 PLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANP-KCSLLVARDP----EDRT 162 (327)
Q Consensus 88 ~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dp-rvSL~V~~~~----~~~~ 162 (327)
..+++++|+++.++++|||++ .+|.|++|+++|+.++ |.+||++|.+++|++||++|| ||||+|.+++ ++++
T Consensus 87 l~~ei~~ll~~~~~~~LAT~~--~~G~P~~S~v~f~~~~-g~~~iliS~lA~Ht~NL~~np~rvSllviede~~~~~~~a 163 (259)
T 3gas_A 87 VEEEVKAFKEGFDSVCLATLH--PNGHVVCSYAPLMSDG-KQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSAIL 163 (259)
T ss_dssp HHHHHHHHHHTCSEEEEEEEC--TTSCEEEEEEEEEEET-TEEEEEEETTSHHHHHHHHSTTSEEEEEECCTTTSSBTTB
T ss_pred HHHHHHHHHHhCCEEEEEeeC--cCCCEEEEEEEEEEEC-CEEEEEEeCchHHHHHHHhCCCeEEEEEEeCccccCChhh
Confidence 457899999999999999998 7999999999999995 789999999999999999999 9999998876 5678
Q ss_pred ceEEEEEEEEEEecch-hHHHHHHHHHHhCCC---C-ccccCCCeEEEEEEEeEEEEEecCcccccCCccCChhhhhccc
Q 020331 163 DLVITLHGDATSVAEK-DKAAIRAVYLAKHPN---A-FWVDFGDFQFMRIEPKAVRYVSGVATALLGSGEFSKEEYQAAN 237 (327)
Q Consensus 163 ~~rvtl~G~a~~v~~e-e~~~l~~~y~~~~P~---~-~~~~~~df~l~rL~p~~v~~v~GFG~a~~~~~~v~~~e~~~A~ 237 (327)
++|+|+.|++++|+++ ++++++++|.++||+ + .|.+++||.||||+|++++||+|||++ +||++++|....
T Consensus 164 ~~Rlt~~g~A~~v~~~~~~~~~~~~~~~r~p~~~~~~~~~~~~DF~l~rl~p~~~r~v~GFG~a----~~l~~~~l~~~~ 239 (259)
T 3gas_A 164 RKRLRYKTNTRFIERGAEFDKAFDSFIEKTGGAGGIKTIRAMQDFHLIALDFKEGRFVKGFGQA----YDILGDKIAYVG 239 (259)
T ss_dssp CCEEEEEEEEEEECSSHHHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEETTEE----EEEETTEEEESC
T ss_pred cCeEEEEEEEEECCCchHHHHHHHHHHHHcCCchhhHhcccCCCeEEEEEEEeEEEEEccccEE----EEeCHHHHHHhh
Confidence 9999999999999874 678899999999998 5 789999999999999999999999999 889999999764
No 5
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.96 E-value=8.7e-29 Score=228.44 Aligned_cols=159 Identities=14% Similarity=0.139 Sum_probs=141.8
Q ss_pred HHHHhHHhhhhhcCCCcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCC-ce
Q 020331 72 VFELIQKHQEAAARLPPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANP-KC 150 (327)
Q Consensus 72 ~~~~~r~~~~~~~rps~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dp-rv 150 (327)
+.+|.++-+.........+++++||+++++++|||++ .+|+|++|+++|+.+ +|.+||+++.+++|++||++|| ||
T Consensus 71 lv~m~~~a~~~~d~~~l~~e~~~ll~~~~~~~LAT~~--~dG~P~~s~v~~~~~-~g~~~~~~s~~a~h~~NL~~nP~rv 147 (251)
T 3swj_A 71 IISLCMSAKSEQNFSGVEKELNEFMLSFNSVALATLN--ANGEVVCSYAPFVST-QWGNYIYISEVSEHFNNIKVNPNNI 147 (251)
T ss_dssp HHHHHHHHSSSCCCSHHHHHHHHHHHTCSEEEEEEEC--TTSCEEEEEEEEEEE-TTEEEEEEETTSHHHHHHHHSTTCE
T ss_pred HHHHHHhccccCChhhHHHHHHHHHhhCCEEEEEEEC--CCCCEEEEEEEEEEE-CCEEEEEEeCchHHHHHHHhCCCeE
Confidence 5556666665555556789999999999999999998 799999999999999 6899999999999999999999 99
Q ss_pred EEEEeeCC----CCCcceEEEEEEEEEEecch-hHHHHHHHHHHhCCCC----ccccCCCeEEEEEEEeEEEEEecCccc
Q 020331 151 SLLVARDP----EDRTDLVITLHGDATSVAEK-DKAAIRAVYLAKHPNA----FWVDFGDFQFMRIEPKAVRYVSGVATA 221 (327)
Q Consensus 151 SL~V~~~~----~~~~~~rvtl~G~a~~v~~e-e~~~l~~~y~~~~P~~----~~~~~~df~l~rL~p~~v~~v~GFG~a 221 (327)
||+|.+++ ++.++.||++.|+++.|+++ +.+++.++|.++||++ .|.+++||.||||+|++++||+|||++
T Consensus 148 Sl~v~e~e~~~~~~~~~~rltl~G~a~~v~~~~e~~~~~~~~~~k~p~a~~~~~~~~~~Df~l~rl~p~~~r~v~GFG~a 227 (251)
T 3swj_A 148 EIMFLEDESKAASVILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKGFGQA 227 (251)
T ss_dssp EEEEECCTTTSSCTTCCCEEEEEEEEEECCSSHHHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEETTEE
T ss_pred EEEEEcCcccccCccccceEEEEEEEEEecChhHHHHHHHHHHHHCCCchhhhhcCcccCEEEEEEEeeEEEEECCccee
Confidence 99998765 56678999999999999874 6788999999999994 467889999999999999999999999
Q ss_pred ccCCccCChhhhhccc
Q 020331 222 LLGSGEFSKEEYQAAN 237 (327)
Q Consensus 222 ~~~~~~v~~~e~~~A~ 237 (327)
+||+++||..+.
T Consensus 228 ----~~l~~~~l~~~~ 239 (251)
T 3swj_A 228 ----YDIENGNVTHVG 239 (251)
T ss_dssp ----EEESSSCCEESC
T ss_pred ----EEeCHHHHHHhh
Confidence 889999999765
No 6
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=99.95 E-value=1.5e-27 Score=203.27 Aligned_cols=128 Identities=20% Similarity=0.266 Sum_probs=116.1
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCC----CCCcceE
Q 020331 90 EEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDP----EDRTDLV 165 (327)
Q Consensus 90 e~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~----~~~~~~r 165 (327)
+++++||++.++++|||++ .||.|++|+|+|++|+ |.+||+++..++|++||++||||||+|.+++ ++.+++|
T Consensus 5 ~ei~~fl~~~~~~~LaT~~--~~G~P~~s~v~~~~~~-~~~~~~~s~~~~~~~nl~~~prvsl~v~~~~~~~~~~~~~~r 81 (148)
T 3tgv_A 5 PEIKEFRQERKTLQLATVD--AQGRPNVSYAPFVQNQ-EGYFVLISHIARHARNLEVNPQVSIMMIEDETEAKQLFARKR 81 (148)
T ss_dssp HHHHHHHHHCCEEEEEEEC--TTCCEEEEEEEEEEET-TEEEEEEETTSHHHHHHHHSCEEEEEEECCGGGCSCGGGCCE
T ss_pred HHHHHHHhhCCEEEEEEEC--CCCCEEEEEEEEEEEC-CEEEEEECCccHHHHHHHhCCCeEEEEecCcccccCcccceE
Confidence 5899999999999999998 7999999999999984 6799999999999999999999999998876 4557899
Q ss_pred EEEEEEEEEecc--hhHHHHHHHHHHhCCCC--ccccCCCeEEEEEEEeEEEEEecCcc
Q 020331 166 ITLHGDATSVAE--KDKAAIRAVYLAKHPNA--FWVDFGDFQFMRIEPKAVRYVSGVAT 220 (327)
Q Consensus 166 vtl~G~a~~v~~--ee~~~l~~~y~~~~P~~--~~~~~~df~l~rL~p~~v~~v~GFG~ 220 (327)
+++.|+++.+++ ++.+++.++|..+||.. .|.+++||.||||+|++++||+|||-
T Consensus 82 ltl~G~a~~v~~~~~~~~~~~~~~~~~~~~~a~~~~~~~DF~~~rl~p~~~r~V~GFG~ 140 (148)
T 3tgv_A 82 LTFDAVASMVERDSELWCQVIAQMGERFGEIIDGLSQLQDFMLFRLQPEQGLFVKGFGL 140 (148)
T ss_dssp EEEEEEEEEECTTSHHHHHHHHHHHHHHCTHHHHHTTCTTEEEEEEEECSCCEEESCGG
T ss_pred EEEeeeEEEcCCCcHHHHHHHHHHHhhcchhhhHhhccCCEEEEEEEeEEEEEECcccc
Confidence 999999999975 35677888999988875 78999999999999999999999994
No 7
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=99.91 E-value=2.5e-24 Score=184.31 Aligned_cols=135 Identities=24% Similarity=0.342 Sum_probs=115.3
Q ss_pred cCCCcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCC----C
Q 020331 84 ARLPPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDP----E 159 (327)
Q Consensus 84 ~rps~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~----~ 159 (327)
.+....+++++||+++++++|||++ .||.|++++++|+.+++|.+||+++..++|++||++||+|||++.+++ +
T Consensus 15 ~~~~~~~~~~~ll~~~~~~~LaTv~--~dG~P~~~~v~~~~~~~g~~~f~t~~~s~k~~nl~~np~vsl~v~~~~~~~~~ 92 (157)
T 1vl7_A 15 QLEKAQAEYAGFIQEFQSAIISTIS--EQGIPNGSYAPFVIDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDDEAKTNQ 92 (157)
T ss_dssp --------CHHHHTTCSEEEEEEEC--TTSCEEEEEEEEEECTTCCEEEEECTTSHHHHHHHHCCEEEEEEECCGGGCSS
T ss_pred hHHhHHHHHHHHHHhCCEEEEEEEC--CCCCEEEEEEEEEEcCCCCEEEEEeCccHHHHHHHhCCcEEEEEEcCccccCC
Confidence 3455678899999999999999998 789999999999999779999999999999999999999999998765 3
Q ss_pred CCcceEEEEEEEEEEecch--hHHHHHHHHHHhCCCC--ccccCCCeEEEEEEEeEEEEEecCcc
Q 020331 160 DRTDLVITLHGDATSVAEK--DKAAIRAVYLAKHPNA--FWVDFGDFQFMRIEPKAVRYVSGVAT 220 (327)
Q Consensus 160 ~~~~~rvtl~G~a~~v~~e--e~~~l~~~y~~~~P~~--~~~~~~df~l~rL~p~~v~~v~GFG~ 220 (327)
+....+|++.|+++.++++ ++.++.++|.++||+. .|.+.++|.+|+|+|++++|++|||+
T Consensus 93 ~~~~~~v~i~G~a~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~l~~~~~~~~~GFG~ 157 (157)
T 1vl7_A 93 IFARRRLSFDCTATLIERESQKWNQVVDQFQERFGQIIEVLRGLADFRIFQLTPKEGRFVIGFGA 157 (157)
T ss_dssp GGGCCEEEEEEEEEEECTTSHHHHHHHHHHHHHHTHHHHHHHHHSCCEEEEEEEEEEEEECSSCC
T ss_pred cccCceEEEEEEEEEcCCCcHHHHHHHHHHHHHCchHHHHhhccCCEEEEEEEEeEEEEEcCcCC
Confidence 4457899999999999864 4678899999999984 56677899999999999999999995
No 8
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=99.72 E-value=1.1e-17 Score=154.83 Aligned_cols=78 Identities=26% Similarity=0.382 Sum_probs=72.6
Q ss_pred hhhHhhhhhcCHHHHHHHHHHhCCCC-CCcEEEEEeeCCCcEEEEcccCCeEEEEEcCCCCCCCHhHHHHHHHHHHHHhh
Q 020331 246 KPVASHMNRDHAEDTRIIVQHSTSIP-VASAYMLDLDSLGFNVKAGYQGNTFKLRIPFPRRAEDRKDVKILIVEMLQAAN 324 (327)
Q Consensus 246 ~~ii~HMN~dH~d~l~~~~~~~~~~~-~~~a~m~~vD~~G~~lr~~~~~~~~~~RipF~~pv~~~~e~r~~Lv~m~~~A~ 324 (327)
++||+|||+||+|++..||++|++++ +..|+|++||++||+|+++ +...+||||++|+++++++|.+||+|+++|+
T Consensus 3 ~~ii~HMN~DH~dal~~y~~~~~~~~~~~~a~m~~iD~~G~~l~~~---~~~~~ri~F~~~~~~~~~~r~~lV~m~~~A~ 79 (259)
T 3gas_A 3 NRIIEHMNAHHVEDMKGLLKKFGQVHHAENVAFKSVDSQGIVIGYN---NNQTLRIEFNHEVKDPKDYKNATIELCQSVE 79 (259)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHCCCSCCSCEEEEEETTEEEEEET---TTEEEEEECSSCCCCGGGHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhHHHHHHHHHHhCCCCCCCceEEEEEecCccEEEEC---CceEEEEeCCCcCCCHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999986 6799999999999999994 2379999999999999999999999999998
Q ss_pred cC
Q 020331 325 SH 326 (327)
Q Consensus 325 ~~ 326 (327)
++
T Consensus 80 ~~ 81 (259)
T 3gas_A 80 KT 81 (259)
T ss_dssp HT
T ss_pred Hh
Confidence 75
No 9
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.69 E-value=9.6e-16 Score=127.55 Aligned_cols=118 Identities=12% Similarity=0.074 Sum_probs=102.2
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCC-CcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEE
Q 020331 90 EEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDAD-GTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITL 168 (327)
Q Consensus 90 e~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~-G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl 168 (327)
++++++|++.++++|||++ .+|.|++++++|+++++ |.+||+++..+.|++||++||+|+|++.+.. ..+++
T Consensus 12 ~~~~~~L~~~~~~~LaT~~--~dG~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~-----~~v~v 84 (137)
T 2asf_A 12 DDALAFLSERHLAMLTTLR--ADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDGA-----RWLSL 84 (137)
T ss_dssp HHHHHHTTSSCCEEEEEEC--TTSCEEEEEECCEEETTTTEEEEEEETTCHHHHHHHHHCEEEEEEEETT-----EEEEE
T ss_pred HHHHHHHhCCCeEEEEEEC--CCCCEEEEEEEEEEECCCCEEEEEeCCCCHHHHHHhhCCeEEEEEECCC-----CEEEE
Confidence 6799999999999999997 68999999999999864 8999999999999999999999999987643 57899
Q ss_pred EEEEEEecch-hHHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEEEEe
Q 020331 169 HGDATSVAEK-DKAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVRYVS 216 (327)
Q Consensus 169 ~G~a~~v~~e-e~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~~v~ 216 (327)
.|+++.++++ +..++.+.|.++||.. ...+++.+++|+|+++...+
T Consensus 85 ~G~a~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~viri~~~~v~g~~ 131 (137)
T 2asf_A 85 EGRAAVNSDIDAVRDAELRYAQRYRTP--RPNPRRVVIEVQIERVLGSA 131 (137)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHSCCC--CCCTTEEEEEEEEEEEEECT
T ss_pred EEEEEEecCHHHHHHHHHHHHHhcCcc--cCCCCEEEEEEEEEEEEEec
Confidence 9999999864 5677888999999753 23568999999999887553
No 10
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.68 E-value=3.5e-17 Score=150.74 Aligned_cols=77 Identities=25% Similarity=0.436 Sum_probs=69.8
Q ss_pred hhhHhhhhhcCHHHHHHHHHHhCCCC-CCcEEEEEeeCCCcEEEEcccCCeEEEEEcCCCCCCCHhHHHHHHHHHHHHhh
Q 020331 246 KPVASHMNRDHAEDTRIIVQHSTSIP-VASAYMLDLDSLGFNVKAGYQGNTFKLRIPFPRRAEDRKDVKILIVEMLQAAN 324 (327)
Q Consensus 246 ~~ii~HMN~dH~d~l~~~~~~~~~~~-~~~a~m~~vD~~G~~lr~~~~~~~~~~RipF~~pv~~~~e~r~~Lv~m~~~A~ 324 (327)
++||+|||+||+|++..||++|++++ ++.|+|++||++||+|.++ +...+||||++|+ +.+++|.+||+|++.|+
T Consensus 4 ~~i~~HMN~DH~d~~~~~a~~~~~~~~~~~~~~~~iD~~g~~l~~~---~~~~~ri~F~~~~-~~~~~r~~lv~m~~~a~ 79 (251)
T 3swj_A 4 ESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGLDLVYN---DKENLRVEFPKKA-DENTIKDTIISLCMSAK 79 (251)
T ss_dssp HHHHHHHHHSCSHHHHHHHHHHTCCSCCC-CEEEEEETTEEEEEC------CEEEEECSSCC-CTTTHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCCCCCeeEEEEEecccCEEEeC---CceEEEEeCCCCC-CHHHHHHHHHHHHHhcc
Confidence 57999999999999999999999996 7899999999999999995 2368999999999 99999999999999999
Q ss_pred cC
Q 020331 325 SH 326 (327)
Q Consensus 325 ~~ 326 (327)
+.
T Consensus 80 ~~ 81 (251)
T 3swj_A 80 SE 81 (251)
T ss_dssp SS
T ss_pred cc
Confidence 75
No 11
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=99.68 E-value=7.3e-16 Score=131.50 Aligned_cols=120 Identities=15% Similarity=0.184 Sum_probs=99.4
Q ss_pred HHHHHHHhcCCeEEEEeecCCCC-CcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEE
Q 020331 90 EEIRTVLDRSVRGMLSTFSQKYE-GYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITL 168 (327)
Q Consensus 90 e~ar~lL~~~~~~~LATv~~~~d-G~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl 168 (327)
++++++|++.+.++|||++ .+ |.|++++|+|+++ +|.+||+++..++|.+||++||+|||++.+.. ..|++
T Consensus 15 ~~~~~~L~~~~~~~LaT~~--~d~G~P~~~pv~~~~d-~~~l~f~t~~~s~K~~~l~~np~Vsl~v~~~~-----~~v~v 86 (155)
T 2iab_A 15 QDTLNRLELDVDAWVSTAG--ADGGAPYLVPLSYLWD-GETFLVATPAASPTGRNLSETGRVRLGIGPTR-----DLVLV 86 (155)
T ss_dssp HHHHHHHHHCCEEEEEEEC--TTSSCEEEEEEECEEC-SSCEEEEEETTSHHHHHHHHHCEEEEEESSTT-----CEEEE
T ss_pred HHHHHHHhCCCeEEEEEec--CCCCCceEEEEEEEEE-CCEEEEEECCCCHHHHHHhhCCcEEEEEEcCC-----CEEEE
Confidence 6799999999999999997 68 9999999999987 67899999999999999999999999997652 46889
Q ss_pred EEEEEEecchh-HHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEEEEec
Q 020331 169 HGDATSVAEKD-KAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVRYVSG 217 (327)
Q Consensus 169 ~G~a~~v~~ee-~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~~v~G 217 (327)
.|+++.+++++ ..++.+.|.++|+.......+++.+|+|+|+++.+.++
T Consensus 87 ~G~a~~v~d~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ri~p~~v~~w~~ 136 (155)
T 2iab_A 87 EGTALPLEPAGLPDGVGDTFAEKTGFDPRRLTTSYLYFRISPRRVQAWRE 136 (155)
T ss_dssp EEEEEEECGGGCCTTHHHHHHHHHSCCGGGCSSCEEEEEEEEEEEEEESS
T ss_pred EEEEEEecCchhHHHHHHHHHHHhCCCccccCCCEEEEEEEEEEEEEecC
Confidence 99999998643 45566677777752111113679999999999887654
No 12
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=99.66 E-value=9.2e-16 Score=128.20 Aligned_cols=126 Identities=17% Similarity=0.106 Sum_probs=102.5
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcC-CCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDA-DGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVIT 167 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~-~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvt 167 (327)
.++++++|+..++++|+|++ .+|.|++++++|..++ +|.+||+++..++|.+||++||+|++++..+. ....|+
T Consensus 8 ~~~~~~~l~~~~~~~LaT~~--~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~---~~~~v~ 82 (146)
T 2hq7_A 8 LIESNELVESSKIVMVGTNG--ENGYPNIKAMMRLKHDGLKKFWLSTNTSTRMVERLKKNNKICLYFVDDN---KFAGLM 82 (146)
T ss_dssp HHHHHHHHHHCSEEEEEEEC--GGGCEEEEEEEEEEEETTTEEEEEEECCHHHHHHHHHCCEEEEEEECSS---SSEEEE
T ss_pred HHHHHHHHhcCCEEEEEEEC--CCCCEEEEEEEEEEEcCCCEEEEEecCCCHHHHHHhhCCeEEEEEECCC---CceEEE
Confidence 46799999999999999997 5799999999999764 48899999999999999999999999998764 235799
Q ss_pred EEEEEEEecchh-HHHHHHHHHH-hCCCCccccCCCeEEEEEEEeEEEEEecCccc
Q 020331 168 LHGDATSVAEKD-KAAIRAVYLA-KHPNAFWVDFGDFQFMRIEPKAVRYVSGVATA 221 (327)
Q Consensus 168 l~G~a~~v~~ee-~~~l~~~y~~-~~P~~~~~~~~df~l~rL~p~~v~~v~GFG~a 221 (327)
+.|+++.+++++ ..++...+.+ .+|+. .+.+++.+++|+|+++.|.+|+|++
T Consensus 83 v~G~a~~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~p~~~~~w~~~~~~ 136 (146)
T 2hq7_A 83 LVGTIEILHDRASKEMLWTDGCEIYYPLG--IDDPDYTALCFTAEWGNYYRHLKNI 136 (146)
T ss_dssp EEEEEEEECCHHHHHHHCCTTHHHHCTTG--GGCTTEEEEEEEEEEEEEEETTEEE
T ss_pred EEEEEEEEcCHHHHHHHHHHHHHHHCCCC--CCCCCEEEEEEEccEEEEEeCCCCe
Confidence 999999998753 3333333333 33432 2346899999999999999999975
No 13
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=99.66 E-value=1.1e-15 Score=126.05 Aligned_cols=119 Identities=18% Similarity=0.205 Sum_probs=98.0
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEEE
Q 020331 90 EEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLH 169 (327)
Q Consensus 90 e~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~ 169 (327)
++++++|+..+.++|||++ .+|.|++++++|++| +|.+||.++..++|++||++||+|+|++.+...+ ...+++.
T Consensus 6 ~~~~~~l~~~~~~~LaT~~--~dG~P~~~pv~~~~d-~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~~--~~~v~v~ 80 (131)
T 3f7e_A 6 EGYESLLERPLYGHLATVR--PDGTPQVNAMWFAWD-GEVLRFTHTTKRQKYRNIKANPAVAMSVIDPDNP--YRYLEVR 80 (131)
T ss_dssp TTCHHHHHSCCCEEEEEEC--TTSCEEEEEECCEEC-SSCEEEEEETTSHHHHHHHHCCEEEEEEECSSCT--TCEEEEE
T ss_pred HHHHHHHhCCCcEEEEEEC--CCCCEEEEEEEEEEE-CCEEEEEECCCCHHHHHHhhCCcEEEEEEcCCCC--eeEEEEE
Confidence 4689999999999999997 689999999999998 5789999999999999999999999999887642 2589999
Q ss_pred EEEEEecchhHHHHHHHHHHhCCCC--cc-ccCCCeEEEEEEEeEEE
Q 020331 170 GDATSVAEKDKAAIRAVYLAKHPNA--FW-VDFGDFQFMRIEPKAVR 213 (327)
Q Consensus 170 G~a~~v~~ee~~~l~~~y~~~~P~~--~~-~~~~df~l~rL~p~~v~ 213 (327)
|+++.|++++..++.+++.++|+.. .+ ...++..++||+|+++.
T Consensus 81 G~a~~v~~~~~~~~~~~l~~ky~~~~~~~~~~~~~~~v~ri~~~~~~ 127 (131)
T 3f7e_A 81 GLVEDIVPDPTGAFYLKLNDRYDGPLTEPPADKADRVIIVVRPTAFS 127 (131)
T ss_dssp EEEEEEEECTTCHHHHHHHHHTTCSCCSCCTTGGGEEEEEEEEEEEE
T ss_pred EEEEEeccCccHHHHHHHHHHhCCcccCCCCCCCCEEEEEEEeEEEE
Confidence 9999987543245666777777654 22 23467899999999764
No 14
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=99.65 E-value=2e-15 Score=125.88 Aligned_cols=126 Identities=20% Similarity=0.311 Sum_probs=95.7
Q ss_pred cHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEE
Q 020331 88 PLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVIT 167 (327)
Q Consensus 88 ~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvt 167 (327)
..++++++|+..++++|||++ +|.|++++|+|..+ +|.+||+++..++|++||++||+|+|++....++.....++
T Consensus 4 l~~~~~~~L~~~~~~~LaT~~---dg~P~~~pv~~~~~-~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~d~~~~~~v~ 79 (139)
T 3ec6_A 4 LKEKITTIIQGQRTGVLSTVR---NDKPHSAFMMFFHE-DFVLYVATDRQSKKITDIENNPNVHVLLGREGKKLDEDYIE 79 (139)
T ss_dssp HHHHHHHHHHSCCEEEEEEEE---TTEEEEEEEECEEE-TTEEEEEEETTCHHHHHHHHCCEEEEEECC---CTTCCEEE
T ss_pred HHHHHHHHHhcCCEEEEEEec---CCCEEEEEEEEEEe-CCEEEEEECCCCHHHHHHHhCCcEEEEEEecCCCCCccEEE
Confidence 346899999999999999996 89999999999985 68999999999999999999999999985432223345799
Q ss_pred EEEEEEEecchh-HHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEEEEecCc
Q 020331 168 LHGDATSVAEKD-KAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVRYVSGVA 219 (327)
Q Consensus 168 l~G~a~~v~~ee-~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~~v~GFG 219 (327)
+.|+++.+++++ .+++...+.+.+.. -.+.+++.+++|+|+++.|.++.|
T Consensus 80 v~G~a~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 80 VEGLASIEEDSTLKNKFWNNSLKRWLL--RPEDPNYVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp EEEEEEEECCHHHHHHHCCGGGGGTCS--STTCTTEEEEEEEEEEEEEEC---
T ss_pred EEEEEEEEcCHHHHHHHHHHHHHHHhC--CCCCCCEEEEEEEeeEEEEEcCCC
Confidence 999999998753 33332222222211 123578999999999999998877
No 15
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.65 E-value=3.6e-15 Score=126.85 Aligned_cols=133 Identities=20% Similarity=0.190 Sum_probs=107.6
Q ss_pred hhhhcCCCcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCC
Q 020331 80 QEAAARLPPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPE 159 (327)
Q Consensus 80 ~~~~~rps~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~ 159 (327)
+++...++ .++++++|+...+++|+|++ .+|.|++++++|+++ +|.+||+++..+.|.+||++||+|++++.+...
T Consensus 4 rr~~~~~~-~~~~~~~l~~~~~~~LaT~~--~~G~P~~~pv~~~~~-~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~ 79 (162)
T 1rfe_A 4 QRADIVMS-EAEIADFVNSSRTGTLATIG--PDGQPHLTAMWYAVI-DGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDT 79 (162)
T ss_dssp CCTTTCCC-HHHHHHHHHHCCCEEEEEEC--TTSCEEEEEECCEEE-TTEEEEEEETTSHHHHHHHHCCEEEEEEEECSS
T ss_pred cccccCCC-HHHHHHHHhcCcEEEEEEEC--CCCCEEEEEEEEEEE-CCEEEEEecCccHHHHHHhhCCeEEEEEEcCCC
Confidence 44444454 47899999999999999997 689999999999987 689999999999999999999999999987664
Q ss_pred CCcceEEEEEEEEEEecch-hHHHHHHHHHHhCCCC------ccc--cCCCeEEEEEEEeEEEEEe
Q 020331 160 DRTDLVITLHGDATSVAEK-DKAAIRAVYLAKHPNA------FWV--DFGDFQFMRIEPKAVRYVS 216 (327)
Q Consensus 160 ~~~~~rvtl~G~a~~v~~e-e~~~l~~~y~~~~P~~------~~~--~~~df~l~rL~p~~v~~v~ 216 (327)
+.....|++.|+++.++++ +..++.+.+.++++.. .|. ..+++.+++|+|+++.+.+
T Consensus 80 ~~~~~~v~~~G~a~~v~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~ 145 (162)
T 1rfe_A 80 YDTLRGVSFEGVAEIVEEPEALHRVGVSVWERYTGPYTDECKPMVDQMMNKRVGVRIVARRTRSWD 145 (162)
T ss_dssp GGGCEEEEEEEEEEEECCHHHHHHHHHHHHHHHTCCCCGGGHHHHHHHTTTEEEEEEEEEEEEEEE
T ss_pred cccccEEEEEEEEEEeCChHHHHHHHHHHHHHhcCcccchhHHHHHhccCceEEEEEEEEEEEEec
Confidence 3345689999999999875 4555666666666541 121 2468999999999999875
No 16
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=99.64 E-value=1.8e-15 Score=124.03 Aligned_cols=120 Identities=18% Similarity=0.272 Sum_probs=91.3
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITL 168 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl 168 (327)
.++++++|++.++++|||++ +|.|++++++|+.+ +|.+||+++..++|.+||++||+|+|+|... +.....+++
T Consensus 7 ~~~~~~~l~~~~~~~LaT~~---~g~P~~~pv~~~~~-~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~--~~~~~~v~v 80 (128)
T 3db0_A 7 EDKILAILEQHQVGVLTSVQ---GDFPHARYMTFLHD-GLTLYTPSGKELPKTEEVRRNPHVCVLIGYD--SPGSAFLEI 80 (128)
T ss_dssp HHHHHHHHHTCCEEEEEEEE---TTEEEEEEEECEEE-TTEEEEEC----CTTCCCCCCCEEEEEECCC--STTCCEEEE
T ss_pred HHHHHHHHhhCCEEEEEEec---CCCEEEEEEEEEec-CCEEEEEECCCCHHHHHHHhCCceEEEEEEc--CCCCcEEEE
Confidence 46899999999999999996 79999999999985 6899999999999999999999999998653 223457999
Q ss_pred EEEEEEecch-hHHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEEEEe
Q 020331 169 HGDATSVAEK-DKAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVRYVS 216 (327)
Q Consensus 169 ~G~a~~v~~e-e~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~~v~ 216 (327)
.|+++.++++ +..++...+.+++.. -.+.+++.++||+|+++.|+.
T Consensus 81 ~G~a~~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~ri~p~~~~~~~ 127 (128)
T 3db0_A 81 NGLASLEEDESIKERIWENISKDWFQ--GEDSPSFVVIKIVPEQIRILN 127 (128)
T ss_dssp EEEEEECCCHHHHHHHHHHHCSSCCC--------CCEEEEEEEEEEEEC
T ss_pred EEEEEEEcCHHHHHHHHHHHHHHhCC--CCCCCCEEEEEEEeEEEEEec
Confidence 9999999764 445555555554432 123468999999999999974
No 17
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=99.63 E-value=6.4e-15 Score=123.74 Aligned_cols=123 Identities=11% Similarity=0.219 Sum_probs=97.6
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeE--EEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDF--ACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVI 166 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y--~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rv 166 (327)
.++++++|+..+.++|||++ .+|.|++++|+| ..+++|.+||+++..++|++||++||+|+|++..+.. ...+
T Consensus 12 ~~~~~~~l~~~~~~~LaT~~--~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~~---~~~v 86 (148)
T 2i02_A 12 IQKLHELIKNIDYGMFTTVD--DDGSLHSYPMSKSGDINSEATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQ---QRYV 86 (148)
T ss_dssp HHHHHHHHTTCCEEEEEEEC--TTSCEEEEEEECBCC---CCEEEEEEETTSHHHHHHHHCCEEEEEEEETTT---TEEE
T ss_pred HHHHHHHHhcCCEEEEEEEc--CCCCEEEEEeEeeEEEcCCCeEEEEEcCCCHHHHHHHhCCcEEEEEEcCCC---CeEE
Confidence 46899999999999999997 689999999999 4455788999999999999999999999999987653 3579
Q ss_pred EEEEEEEEecchh-HHHHHHHHHHh-CCCCccccCCCeEEEEEEEeEEEEEecC
Q 020331 167 TLHGDATSVAEKD-KAAIRAVYLAK-HPNAFWVDFGDFQFMRIEPKAVRYVSGV 218 (327)
Q Consensus 167 tl~G~a~~v~~ee-~~~l~~~y~~~-~P~~~~~~~~df~l~rL~p~~v~~v~GF 218 (327)
++.|+++.+++++ ..++...+.++ +|+. .+.+++.+++|+|+++.|.++-
T Consensus 87 ~v~G~a~~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~~~ 138 (148)
T 2i02_A 87 SISGTSQLVKDRNKMRELWKPELQTWFPKG--LDEPDIALLKVNINQVNYWDST 138 (148)
T ss_dssp EEEEEEEEECCHHHHHHHCCGGGGGTCTTG--GGCTTEEEEEEEEEEEEEEEGG
T ss_pred EEEEEEEEEcCHHHHHHHHhHHHHHHccCC--CCCCCEEEEEEEeCEEEEEcCC
Confidence 9999999998754 23333333333 3332 2346899999999999999763
No 18
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.63 E-value=5.3e-15 Score=122.85 Aligned_cols=122 Identities=18% Similarity=0.257 Sum_probs=99.7
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcC-CCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDA-DGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVIT 167 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~-~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvt 167 (327)
.++++++|+..++++|+|++ .+|.|++++++|+.++ +|.+||+++..++|++||++||+|++++..+. ..++
T Consensus 10 ~~~~~~~l~~~~~~~LaT~~--~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~-----~~v~ 82 (141)
T 2fhq_A 10 KEKAVELLQKCEVVTLASVN--KEGYPRPVPMSKIAAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKG-----DSVA 82 (141)
T ss_dssp HHHHHHHHHTCSEEEEEEEC--TTSCEEEEEEECCEEETTTEEEEEEETTSHHHHHHHHCCEEEEEEEETT-----EEEE
T ss_pred HHHHHHHHhcCCEEEEEEEC--CCCCEEEEeeEEEEeCCCCeEEEEeCCCCHHHHHHHhCCcEEEEEEeCC-----CEEE
Confidence 46899999999999999997 6899999999999753 48999999999999999999999999998875 3799
Q ss_pred EEEEEEEecch-hHHHHHHHHHH-hCCCCccccCCCeEEEEEEEeEEEEEecCcc
Q 020331 168 LHGDATSVAEK-DKAAIRAVYLA-KHPNAFWVDFGDFQFMRIEPKAVRYVSGVAT 220 (327)
Q Consensus 168 l~G~a~~v~~e-e~~~l~~~y~~-~~P~~~~~~~~df~l~rL~p~~v~~v~GFG~ 220 (327)
+.|+++.++++ +..++...+.+ .+|.. .+.+++.+++|+|+++.|.+| |+
T Consensus 83 v~G~a~~v~d~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~i~p~~~~~~~~-~~ 134 (141)
T 2fhq_A 83 LMGEVEVVTDEKLKQELWQDWFIEHFPGG--PTDPGYVLLKFTANHATYWIE-GT 134 (141)
T ss_dssp EEEEEEEECCHHHHHHSCCGGGGGTCTTC--TTCTTEEEEEEEEEEEEEEET-TE
T ss_pred EEEEEEEECCHHHHHHHHHHHHHHHcCCC--CCCCCEEEEEEEcCEEEEeeC-Cc
Confidence 99999999875 34443333333 34432 234689999999999999987 54
No 19
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=99.61 E-value=2e-14 Score=118.55 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=99.0
Q ss_pred cHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEE-cC-CCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceE
Q 020331 88 PLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFAC-DA-DGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLV 165 (327)
Q Consensus 88 ~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~-d~-~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~r 165 (327)
..++++++|+..++++|||++ .+|.|++++|+|.. ++ +|.+||+++..++|.+||++||+|+|++..+.. ...
T Consensus 7 ~~~~~~~~l~~~~~~~LaT~~--~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~K~~~l~~np~v~l~~~~~~~---~~~ 81 (134)
T 2re7_A 7 HIDKIQAVIKDVKFAMISTSN--KKGDIHAWPMTTSEVNLDNKEIWFIGDKTSDVVKDIQDDARIGLTYATQDE---KNY 81 (134)
T ss_dssp CHHHHHHHHHHCSCEEEEEEC--TTSCEEEEEECCSEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTS---SCE
T ss_pred HHHHHHHHHhcCCEEEEEEEc--CCCCEEEEecEeeeecCCCceEEEEECCCCHHHHHHhhCCcEEEEEEcCCC---CeE
Confidence 467899999999999999997 68999999999964 32 788999999999999999999999999987652 236
Q ss_pred EEEEEEEEEecchh-HHHHHHHHHH-hCCCCccccCCCeEEEEEEEeEEEEEec
Q 020331 166 ITLHGDATSVAEKD-KAAIRAVYLA-KHPNAFWVDFGDFQFMRIEPKAVRYVSG 217 (327)
Q Consensus 166 vtl~G~a~~v~~ee-~~~l~~~y~~-~~P~~~~~~~~df~l~rL~p~~v~~v~G 217 (327)
+++.|+++.+++++ ..++...+.+ .+|+. .+.+++.+++|+|+++.|..|
T Consensus 82 v~v~G~a~~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~w~~ 133 (134)
T 2re7_A 82 VSISGDAELPTDKAKLDELWSPVYSAFFANG--KEDANIQLIKVVPHGVECWLS 133 (134)
T ss_dssp EEEEEEEECCCCHHHHHHHCCHHHHHTSTTG--GGCTTEEEEEEEEEEEEEECC
T ss_pred EEEEEEEEEECCHHHHHHHhhHHHHHHccCC--CCCCCEEEEEEEeCEEEEecC
Confidence 89999999998754 3344333333 35542 334689999999999999865
No 20
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.58 E-value=1e-14 Score=127.23 Aligned_cols=136 Identities=8% Similarity=0.080 Sum_probs=110.0
Q ss_pred hHHhhhhhcCCCcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEe
Q 020331 76 IQKHQEAAARLPPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVA 155 (327)
Q Consensus 76 ~r~~~~~~~rps~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~ 155 (327)
++.++++....+..+++++||+++.+|+|+|++ ++|.|++++++|+++ +|.+||.++..++|.+||++||+|+++|.
T Consensus 15 ~~~mr~~~~~~~d~~ei~~~L~~~~~~~Lat~~--~dg~P~v~Pv~f~~~-~~~lyfhta~~~~k~~~l~~np~V~~~v~ 91 (178)
T 2fg9_A 15 LYFQGMKTIVIEDKQRIESIILQADACFVGITD--LEGNPYVVPMNFGYE-NDTLYLHSGPEGGKIEMLQRNNNVCITFS 91 (178)
T ss_dssp CEEEEEEEEEECCHHHHHHHHHHCSCEEEEEEC--TTSCEEEEEECCEEE-TTEEEEEECSCSHHHHHHHHCCEEEEEEE
T ss_pred cceecchhhcCCCHHHHHHHHHhCCEEEEEEEC--CCCcEEEEEEEEEEE-CCEEEEEcCCcchHHHHhhcCCcEEEEEE
Confidence 345566666777778999999999999999997 589999999999998 57999999989999999999999999998
Q ss_pred eCCCC------------CcceEEEEEEEEEEecch-hHHHHHHHHHHhCCCCc--cc--cCCCeEEEEEEEeEEEE
Q 020331 156 RDPED------------RTDLVITLHGDATSVAEK-DKAAIRAVYLAKHPNAF--WV--DFGDFQFMRIEPKAVRY 214 (327)
Q Consensus 156 ~~~~~------------~~~~rvtl~G~a~~v~~e-e~~~l~~~y~~~~P~~~--~~--~~~df~l~rL~p~~v~~ 214 (327)
..... .....|++.|+++.++++ +..++.+.+.++|+... +. ......+|+|+|+++.-
T Consensus 92 ~~~~~is~~~~~~~~~t~~y~sV~v~G~a~~v~d~~e~~~~l~~l~~~y~~~~~~~~~~~~~~~~v~rI~i~~itg 167 (178)
T 2fg9_A 92 LGHKLVYQHKQVACSYSMRSESAMCRGKVEFIEDMEEKRHALDIIMRHYTKDQFSYSDPAVRNVKVWKVPVDQMTG 167 (178)
T ss_dssp CCCEEEEEC----CEEEEEEEEEEEEEECEEECSHHHHHHHHHHHHHTTCSSCCCCCHHHHHTCEEEEEEEEEEEE
T ss_pred eCCceeeccCCCCCCCcccEEEEEEEEEEEEECCHHHHHHHHHHHHHHhCCCCCCcChHhhCCeEEEEEEeEEEEE
Confidence 76531 135679999999999875 56667778888876532 21 12467999999998754
No 21
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=99.57 E-value=8.5e-14 Score=117.44 Aligned_cols=122 Identities=16% Similarity=0.220 Sum_probs=99.0
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITL 168 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl 168 (327)
.++++++|+..+.++|||++ .||.|++.+++|...++|.+||+++..++|.+||++||+|++++..+..... ..|++
T Consensus 4 ~~~~~~~l~~~~~~~LaTv~--~dG~P~~~p~~~~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~~~~~-~~v~i 80 (150)
T 2hhz_A 4 LKDIMHILEDMKVGVFATLD--EYGNPHARHAHITAANEEGIFFMTSPETHFYDQLMGDQRVAMTAISEEGYLI-QVVRV 80 (150)
T ss_dssp HHHHHHHHHHTCEEEEEEEC--TTCCEEEEEEEEEEEETTEEEEEECTTSHHHHHHHHCCEEEEEEEECSTTCC-EEEEE
T ss_pred HHHHHHHHhcCCeEEEEEEC--CCCCEEEEEEEEEEEcCCEEEEEecCCCHHHHHHhhCCeEEEEEEcCCccee-EEEEE
Confidence 46899999999999999997 6899999999998754677999999999999999999999999987663221 57999
Q ss_pred EEEEEEecchhHHHHHHHHHHhCCCC--ccc--cCCCeEEEEEEEeEEEEEec
Q 020331 169 HGDATSVAEKDKAAIRAVYLAKHPNA--FWV--DFGDFQFMRIEPKAVRYVSG 217 (327)
Q Consensus 169 ~G~a~~v~~ee~~~l~~~y~~~~P~~--~~~--~~~df~l~rL~p~~v~~v~G 217 (327)
.|+++.+++++. . .+.+++|.. .|. +.+++.+++|+|.++.|.+.
T Consensus 81 ~G~a~~v~d~~~---~-~~~~~~p~~~~~~~~~~~~~~~v~~i~~~~~~~~d~ 129 (150)
T 2hhz_A 81 EGTARPVENDYL---K-TVFADNPYYQHIYKDESSDTMQVFQIYAGHGFYHSL 129 (150)
T ss_dssp EEEEEEECHHHH---H-HHHTTCGGGGGGCC-----CCEEEEEEEEEEEEEEG
T ss_pred EEEEEECCcHHH---H-HHHHhChhhhhcccCCCCCcEEEEEEEccEEEEEEC
Confidence 999999988752 2 455556765 332 34679999999999999863
No 22
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=99.57 E-value=8.1e-14 Score=121.95 Aligned_cols=134 Identities=14% Similarity=0.125 Sum_probs=99.3
Q ss_pred HHhhhhhcCCCcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEee
Q 020331 77 QKHQEAAARLPPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVAR 156 (327)
Q Consensus 77 r~~~~~~~rps~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~ 156 (327)
++|+++....+..|++++||+++.+|+|+|++ +|.|++++++|+++ +|.+||+++..++|.+||++||+|+++|..
T Consensus 3 ~~mRr~~~~~~d~e~i~~~L~~~~~~~Lat~~---~g~P~~~Pv~f~~~-~~~ly~hta~~~~k~~~l~~np~V~~~v~~ 78 (185)
T 2hti_A 3 NAIRYTKRECKDEKKITEFLNKARTGFLGLST---NDQPYVIPLNFVWH-NHAIYFHGASEGRKIKMIEANPEVCFTICE 78 (185)
T ss_dssp --------CCCCHHHHHHHHHHCCCEEEEEEE---TTEEEEEEECCEEE-TTEEEEEEESSSHHHHHHHHCCEEEEEEEE
T ss_pred cccccccccCCCHHHHHHHHhcCCEEEEEEee---CCEEEEEEEEEEEE-CCEEEEEeCCcCHHHHHhhcCCeEEEEEEe
Confidence 34666667788888899999999999999997 68999999999998 589999999999999999999999999988
Q ss_pred C----CC------CCcceEEEEEEEEEEecch-hHHHHHHHHHHhC-CCC---c--c------c--cCCCeEEEEEEEeE
Q 020331 157 D----PE------DRTDLVITLHGDATSVAEK-DKAAIRAVYLAKH-PNA---F--W------V--DFGDFQFMRIEPKA 211 (327)
Q Consensus 157 ~----~~------~~~~~rvtl~G~a~~v~~e-e~~~l~~~y~~~~-P~~---~--~------~--~~~df~l~rL~p~~ 211 (327)
. .. ......|++.|+++.++++ +..++.+.+.++| |.. . + . ......+|+|+|++
T Consensus 79 ~~~~~~~~v~~~~t~~y~sV~v~G~a~~v~d~~e~~~~l~~l~~~y~~~~~~~p~~~~~~~~~~~~~~~~~~v~rI~i~~ 158 (185)
T 2hti_A 79 DLGTIVSPVPAHTDTAYMSVIIFGTIEPVSAIEEGTEAMQQMLDKYVPGYYHSPLAASHVEKYRSSLGSRTAIYKISCRE 158 (185)
T ss_dssp CC-------------CEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCC-----------------CCCSSEEEEEEEEEE
T ss_pred ccccccccccccCcceEEEEEEEEEEEEECCHHHHHHHHHHHHHHhCCCCCCcccchhhccccchHHhCCeEEEEEEeEE
Confidence 7 41 1245679999999999875 5555566666655 321 0 1 1 13457999999997
Q ss_pred EEE
Q 020331 212 VRY 214 (327)
Q Consensus 212 v~~ 214 (327)
+.-
T Consensus 159 itg 161 (185)
T 2hti_A 159 RTA 161 (185)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 23
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=99.56 E-value=9.7e-14 Score=117.59 Aligned_cols=119 Identities=15% Similarity=0.204 Sum_probs=94.9
Q ss_pred cHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEE
Q 020331 88 PLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVIT 167 (327)
Q Consensus 88 ~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvt 167 (327)
..+++++||+++.+|+|||+. +|.|+++|++|+++ +|.+||++. .++|.+||++||+|+++|...........|+
T Consensus 11 ~~~e~~~lL~~~~~~~Lat~~---dg~P~~~Pv~~~~~-~~~ly~~~~-~g~K~~~l~~np~V~~~v~~~~~~~~y~sV~ 85 (148)
T 3u5w_A 11 SDYDIREMIQHKHVGRLGYVV---DDRPIIVPMTFRFS-GGSFYSFTT-DGQKTNAMRKNDAICILFDQIESQTKWRTVL 85 (148)
T ss_dssp CHHHHHHHHHHCCEEEEEEEE---TTEEEEEEEECEEE-TTEEEEEEC-CHHHHHHHHHCCEEEEEEEEESSSSSEEEEE
T ss_pred CHHHHHHHHhcCCEEEEEEcc---CCcEEEEEEEEEEE-CCEEEEEEC-CchhHHHHhcCCcEEEEEEecCCCCcEEEEE
Confidence 457899999999999999995 89999999999998 478999885 5799999999999999998866444556799
Q ss_pred EEEEEEEecch-hHHHHHHHHHHhCCC--C-----cccc------CCCeEEEEEEEeEEE
Q 020331 168 LHGDATSVAEK-DKAAIRAVYLAKHPN--A-----FWVD------FGDFQFMRIEPKAVR 213 (327)
Q Consensus 168 l~G~a~~v~~e-e~~~l~~~y~~~~P~--~-----~~~~------~~df~l~rL~p~~v~ 213 (327)
+.|+++.++++ +...+.+ +..+||+ . .|.. .... ++||+|+++.
T Consensus 86 v~G~a~~v~d~~e~~~al~-l~~ky~~~~~~~~~~p~~~~~~~~~~~~~-v~rI~i~~~s 143 (148)
T 3u5w_A 86 VQGRYREIAREDEEEAIVR-IMANEPTWWEPAYTKTITKEGTARALKPV-FFRVDIEKLS 143 (148)
T ss_dssp EEEEEEECCGGGHHHHHHH-HHTTCSSCC-----------------CCE-EEEEEEEEEE
T ss_pred EEEEEEEeCCHHHHHHHHH-HHHHCCCCccccCCCcccccchhhccCcE-EEEEEeeEEE
Confidence 99999999874 5555665 7788986 1 1211 2344 9999999864
No 24
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=99.53 E-value=2.2e-13 Score=113.81 Aligned_cols=123 Identities=18% Similarity=0.215 Sum_probs=97.1
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCC-cEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADG-TPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVIT 167 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G-~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvt 167 (327)
.++++++|+...+++|+|++ .+|.|++++++|.+++++ .+||.++..+.|.+||++||+|++++..+. +. ..|+
T Consensus 7 ~~~~~~~l~~~~~~~LaT~~--~~G~P~~~pv~~~~~~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~-~~--~~v~ 81 (147)
T 2aq6_A 7 DDKLLAVISGNSIGVLATIK--HDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADD-GW--SYAV 81 (147)
T ss_dssp HHHHHHHHHTCSEEEEEEEC--TTSCEEEEEEECEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTT-SS--CEEE
T ss_pred hHHHHHHHhcCCeEEEEEEC--CCCCEEEEEEEEEEcCCCCEEEEEecCCCHHHHHHhhCCcEEEEEEcCC-Cc--EEEE
Confidence 46899999999999999997 689999999999998653 788888889999999999999999998754 22 4699
Q ss_pred EEEEEEEecch--h----HHHHHHHHHHhC---CCC-cccc---CCCeEEEEEEEeEEEEEe
Q 020331 168 LHGDATSVAEK--D----KAAIRAVYLAKH---PNA-FWVD---FGDFQFMRIEPKAVRYVS 216 (327)
Q Consensus 168 l~G~a~~v~~e--e----~~~l~~~y~~~~---P~~-~~~~---~~df~l~rL~p~~v~~v~ 216 (327)
+.|+++.++++ + .+++.+.|.... +.. .|.+ .+...+++|+|+++...+
T Consensus 82 v~G~a~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~i~~~~ 143 (147)
T 2aq6_A 82 AEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLP 143 (147)
T ss_dssp EEEECEECCCCCSTTSHHHHHHHHHHHHHTCSCSCHHHHHHHHHHTTEEEEEEECCEEEEEC
T ss_pred EEEEEEEcCCCCCccHHHHHHHHHHHHhccCCCCchhHHHHhcccCceEEEEEEEEEEEccc
Confidence 99999999763 2 355666666532 211 2221 257899999999988754
No 25
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.52 E-value=8.5e-14 Score=118.21 Aligned_cols=121 Identities=16% Similarity=0.175 Sum_probs=100.0
Q ss_pred CcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEE
Q 020331 87 PPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVI 166 (327)
Q Consensus 87 s~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rv 166 (327)
...++++++|+..+.++|||++ +|.|++.+|+|...++|.+||+++..++|.+||++||+|++++.... ...|
T Consensus 18 ~~~~~~~~~l~~~~~~~LaTv~---dG~P~~rpv~~~~~~~~~l~f~t~~~s~K~~~l~~np~V~l~~~~~~----~~~v 90 (150)
T 2ig6_A 18 QGMKRALEFLKECGVFYLATNE---GDQPRVRPFGAVFEYEGKLYIVSNNTKKCFKQMIQNPKVEISGMNKK----GQWI 90 (150)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEE---TTEEEEEEECCCEEETTEEEEEEETTSHHHHHHHHCCEEEEEEECTT----SCEE
T ss_pred cCHHHHHHHHHhCCeEEEEEcc---CCceEEEEeEEEEEcCCEEEEEeCCCcHHHHHHHHCCCEEEEEEcCC----CeEE
Confidence 3457899999999999999996 79999999999764467899999999999999999999999998765 3579
Q ss_pred EEEEEEEEecchhHHHHHHHHHHhCCCC--cc-ccCCCeEEEEEEEeEEEEEec
Q 020331 167 TLHGDATSVAEKDKAAIRAVYLAKHPNA--FW-VDFGDFQFMRIEPKAVRYVSG 217 (327)
Q Consensus 167 tl~G~a~~v~~ee~~~l~~~y~~~~P~~--~~-~~~~df~l~rL~p~~v~~v~G 217 (327)
++.|+++.+++++ ..+.+...+|.. .| .+.+++.+|+|+|.++.|.+.
T Consensus 91 ~i~G~a~~v~d~e---~~~~~~~~~p~~~~~~~~~dp~~~l~~v~~~~a~~wd~ 141 (150)
T 2ig6_A 91 RLTGEVANDDRRE---VKELALEAVPSLKNMYSVDDGIFAVLYFTKGEGTICSF 141 (150)
T ss_dssp EEEEEEEECCCHH---HHHHHHHHSGGGGGTCCTTSSCEEEEEEEEEEEEEECS
T ss_pred EEEEEEEEECCHH---HHHHHHHhChHHHHhhcCCCCcEEEEEEECCEEEEEeC
Confidence 9999999998864 234455556765 33 235679999999999999864
No 26
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=99.51 E-value=4.1e-13 Score=113.43 Aligned_cols=124 Identities=11% Similarity=0.067 Sum_probs=100.1
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcC--CCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDA--DGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVI 166 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~--~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rv 166 (327)
.++++++|+..++++|||++ .+| |++.++++..+. +|.+||+++..++|.+||++||+|+|++.++... ..|
T Consensus 9 ~~~~~~~l~~~~~~~LaT~~--~d~-~~~~pm~~~~~~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~~---~~v 82 (147)
T 3dmb_A 9 QDKFWKALKSDRTVMLGLDG--VED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHD---LFA 82 (147)
T ss_dssp HHHHHHHHHHHCEEEEEETT--SSS-CCCEEEEEECSSSSCCCEEEEECTTCTTHHHHTTCEEEEEEEECTTSS---EEE
T ss_pred HHHHHHHHhcCCEEEEEEEc--CCC-CceEeCccccccCCCceEEEEecCCcHHHHHHhhCCeEEEEEEcCCCC---eEE
Confidence 46799999999999999997 455 899999999764 5889999999999999999999999999877633 469
Q ss_pred EEEEEEEEecchh-HHHHHHHHHH-hCCCCccccCCCeEEEEEEEeEEEEEecCcc
Q 020331 167 TLHGDATSVAEKD-KAAIRAVYLA-KHPNAFWVDFGDFQFMRIEPKAVRYVSGVAT 220 (327)
Q Consensus 167 tl~G~a~~v~~ee-~~~l~~~y~~-~~P~~~~~~~~df~l~rL~p~~v~~v~GFG~ 220 (327)
+++|+++.+++++ .+++-..|.+ .+|+. .+.+++.+++|+|+++.|.+|-|.
T Consensus 83 ~v~G~a~~~~d~~~~~~~~~~~~~~~~~~g--~~dp~~~vl~v~p~~~e~W~~~~~ 136 (147)
T 3dmb_A 83 SISGSLREDTDPAVVDRLWNPYVAAWYEGG--KDDPKLALLRLDADHAQIWLNGSS 136 (147)
T ss_dssp EEEEEEEECCCHHHHHHHCCHHHHHHCTTG--GGCTTCEEEEEEEEEEEEEECCCC
T ss_pred EEEEEEEEecCHHHHHHHhhHHHHHHccCC--CCCCCEEEEEEEcCEEEEEECCCC
Confidence 9999999998754 4444344443 34542 345789999999999999987654
No 27
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=99.47 E-value=3.6e-13 Score=118.25 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=101.7
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcC--CCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDA--DGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVI 166 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~--~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rv 166 (327)
.+++.+||+..++|+|||++ .+| |++.+++|..+. +|.+||+++..++|++||++||+|+|++.++... ..|
T Consensus 28 ~e~i~~~L~~~~~~~LaTv~--~dg-p~~rpm~~~~d~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~~---~~V 101 (182)
T 3u35_A 28 QEKFWKALKSDRTVMLGLDG--VED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHD---LFA 101 (182)
T ss_dssp HHHHHHHHHHHCEEEECCTT--SGG-GCCEEEECBCSSSSCSCEEEEEETTCGGGGGCTTCEEEEEEEECTTSS---EEE
T ss_pred HHHHHHHHccCCEEEEEEec--CCC-CcEEEEEEEEeecCCCEEEEEECCCCHHHHHHHHCCcEEEEEECCCCC---eEE
Confidence 46799999999999999997 455 899999999764 5889999999999999999999999999877533 469
Q ss_pred EEEEEEEEecchh-HHHHHHHHHH-hCCCCccccCCCeEEEEEEEeEEEEEecCcccc----cCCccCChhhhh
Q 020331 167 TLHGDATSVAEKD-KAAIRAVYLA-KHPNAFWVDFGDFQFMRIEPKAVRYVSGVATAL----LGSGEFSKEEYQ 234 (327)
Q Consensus 167 tl~G~a~~v~~ee-~~~l~~~y~~-~~P~~~~~~~~df~l~rL~p~~v~~v~GFG~a~----~~~~~v~~~e~~ 234 (327)
+|.|+++.+++++ .+++-..|.+ .||+. .+.+++.+++|+|+++.|.++.+... ..-+..++.||+
T Consensus 102 ~v~G~a~vv~D~e~~~~lw~~~~~~~~p~g--~~dP~~~vlrv~p~~~e~Wd~~~~~~~~~~~~~G~~~~~~~~ 173 (182)
T 3u35_A 102 SISGSLREDTDPAMVDRLWNPYVAAWYEGG--KTDPNLALLRLDADHAQIWLNESSLLAGIKVLLGVDPKKDYQ 173 (182)
T ss_dssp EEEEEEEECCCHHHHHHHCCHHHHTTCTTG--GGCTTEEEEEEEEEEEEEEEEEEEECCCEEEECC--------
T ss_pred EEEEEEEEEcCHHHHHHHHHHHHHHhccCC--CCCCCEEEEEEEeCEEEEEeCCCCceeeeeeeccCCCCcccc
Confidence 9999999998764 4444344544 34432 34578999999999999997655420 001445566655
No 28
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=99.47 E-value=1.3e-12 Score=110.07 Aligned_cols=120 Identities=19% Similarity=0.147 Sum_probs=89.3
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITL 168 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl 168 (327)
.++++++|+++.+|+|+|++ +|.|++++++|+++ +|.+||+. ..++|.+||++||+|++++.+.........|++
T Consensus 9 ~~~~~~~L~~~~~~~Lat~~---~g~P~~~pv~~~~~-~~~l~~~t-~~~~k~~~l~~~p~V~~~v~~~~~~~~y~sV~v 83 (149)
T 2hq9_A 9 ALECTKVLTANRVGRLACAK---DGQPYVVPLYYAYS-DAHLYAFS-MPGKKIEWMRANPRVSVQVDEHGQGRGWKSVVV 83 (149)
T ss_dssp HHHHHHHHHHCCEEEEEEEE---TTEEEEEEEECEEE-TTEEEEEE-CSSHHHHHHHHCCEEEEEEEEECSTTCEEEEEE
T ss_pred HHHHHHHHHhCCEEEEEEcc---CCeEEEEEEEEEEE-CCEEEEEe-CccHHHHHHhcCCcEEEEEEecCCCCcEEEEEE
Confidence 46899999999999999996 89999999999998 58899985 678999999999999999988654345567999
Q ss_pred EEEEEEecchh-----H-HH--HHHHHHHhC-CC--Ccc----ccCCCeEEEEEEEeEEE
Q 020331 169 HGDATSVAEKD-----K-AA--IRAVYLAKH-PN--AFW----VDFGDFQFMRIEPKAVR 213 (327)
Q Consensus 169 ~G~a~~v~~ee-----~-~~--l~~~y~~~~-P~--~~~----~~~~df~l~rL~p~~v~ 213 (327)
.|+++.+++++ . .. +..+|.... |. ..| .......++||+|+++.
T Consensus 84 ~G~a~~v~d~~~~~~~~~~~l~l~~ky~~~w~~~~~~~~~~~~~~~~~~~v~ri~~~~i~ 143 (149)
T 2hq9_A 84 DGRYEELPDLIGHKLQRDHAWSVLSKHTDWWEPGALKPVTPPTADSAPHVFFRILIEQVS 143 (149)
T ss_dssp EEEEEECCSCGGGHHHHHHHHHHHHHHHHHHC--------------CCCEEEEEEEEEEE
T ss_pred EEEEEEEcCcccchHHHHHHHHHHHhcccccCCCcccccccccccCCceEEEEEEeEEeE
Confidence 99999998643 1 11 333443200 11 111 12345689999999765
No 29
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=99.45 E-value=7.5e-13 Score=113.33 Aligned_cols=120 Identities=15% Similarity=0.144 Sum_probs=96.9
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEE-cCCCc-EEEEecCCchHHHhhhhCCc-eEEEEeeCCCCCcceE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFAC-DADGT-PILAVSSLAVHTKDLLANPK-CSLLVARDPEDRTDLV 165 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~-d~~G~-~~~~vs~~s~htrNL~~dpr-vSL~V~~~~~~~~~~r 165 (327)
.++++++|+.+++++||| +|.|++.+|+|.. +++|. +||+++..++|.+||++||+ |+|++..... ...
T Consensus 6 ~~~~~~~L~~~~~~~LaT-----dG~P~~rpv~~~~~~~~g~~l~f~t~~~s~K~~~l~~np~~v~l~~~~~~~---~~~ 77 (160)
T 2qea_A 6 THEFWDRLEDVRSGMLGI-----KGQGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGE---GLY 77 (160)
T ss_dssp HHHHHHHHTTCCCEEEEE-----TTSSCCEEECCBCCTTSCSCEEEEEETTSHHHHHTSSSCEEEEEEEEETTT---TEE
T ss_pred HHHHHHHHhcCCEEEEEe-----CCCeeEEEeeeeEecCCCCEEEEEECCCCHHHHHHHhCCceEEEEEECCCC---CeE
Confidence 367999999999999999 4999999999984 45788 99999999999999999999 9999987652 246
Q ss_pred EEEEEEEEEecchh-HHHHHHHHHHh-CCCCccccCCCeEEEEEEEeEEEEEecC
Q 020331 166 ITLHGDATSVAEKD-KAAIRAVYLAK-HPNAFWVDFGDFQFMRIEPKAVRYVSGV 218 (327)
Q Consensus 166 vtl~G~a~~v~~ee-~~~l~~~y~~~-~P~~~~~~~~df~l~rL~p~~v~~v~GF 218 (327)
+++.|+++.+++++ .+++...+.++ +|+. .+.+++.+|+|+|+++.|..|-
T Consensus 78 v~v~G~a~~v~d~~~~~~~~~~~~~~~~~~~--~~~p~~~v~~i~p~~~e~w~~~ 130 (160)
T 2qea_A 78 ADLDGTLERSTDREALDEFWSFVADAWFDGG--QHDPDVCLLKFTPASGEISITE 130 (160)
T ss_dssp EEEEEEEEEECCHHHHHHSCCHHHHHHCTTC--SSCTTEEEEEEEEEEEEEEEEC
T ss_pred EEEEEEEEEEcCHHHHHHHHHHHHHHHccCC--CCCCCEEEEEEECCEEEEEECC
Confidence 89999999998753 34443444443 3532 3456899999999999998764
No 30
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=2.6e-12 Score=107.94 Aligned_cols=115 Identities=13% Similarity=0.123 Sum_probs=84.4
Q ss_pred cHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEE
Q 020331 88 PLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVIT 167 (327)
Q Consensus 88 ~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvt 167 (327)
..+++++||+++.+|.|||+. +|.|++.|++|+++ +|.+||+++. ..|..|+++||+||++|...+..... .|.
T Consensus 10 ~~~e~~~lL~~~~~g~La~~~---dg~P~vvPv~f~~~-~~~iyfh~a~-g~K~~~i~~~~~V~f~vd~~~~~~~~-SV~ 83 (138)
T 3fkh_A 10 NEQEALERLQSVSLGRVVVRR---SDEMDIFPVNFIVD-KGAIYIRTAE-GNKLFSMNLNHDVLFEADEVKDGKAW-SVV 83 (138)
T ss_dssp CHHHHHHHHTTCSEEEEEEEE---TTEEEEEEEEEEEE-TTEEEEEEEC---------CCSEEEEEEEEEETTEEE-EEE
T ss_pred CHHHHHHHHccCCEEEEEEee---CCEEEEEEEEEEEE-CCEEEEEeCC-ChHHHHhhcCCCEEEEEEECCCCCCE-EEE
Confidence 457899999999999999996 89999999999999 5889998887 56999999999999999865422222 799
Q ss_pred EEEEEEEecch-hHHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEE
Q 020331 168 LHGDATSVAEK-DKAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVR 213 (327)
Q Consensus 168 l~G~a~~v~~e-e~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~ 213 (327)
+.|+++.|+++ |..++.+.. -..|.......++||+|+++.
T Consensus 84 v~G~a~~v~d~~e~~~a~~~~-----~~~~~~~~~~~~irI~p~~it 125 (138)
T 3fkh_A 84 VRATAEIVRKLDEIAYADTLE-----LKPWIPTLKYNYVRIVPNEIT 125 (138)
T ss_dssp EEEEEEECCSHHHHHHHHHSC-----CCCSSCCSSEEEEEEEEEEEE
T ss_pred EEEEEEEECCHHHHHHHHhcc-----cCCCCCCCccEEEEEEEEEEE
Confidence 99999999875 443333221 115555567899999999865
No 31
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=99.43 E-value=8.3e-13 Score=118.03 Aligned_cols=133 Identities=13% Similarity=0.102 Sum_probs=101.7
Q ss_pred HHhhhhhcCCCcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEee
Q 020331 77 QKHQEAAARLPPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVAR 156 (327)
Q Consensus 77 r~~~~~~~rps~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~ 156 (327)
+.|+++.......+++++||+++.+|+|+|++ +|.|++++++|+++ +|.+||+++..++|.+||++||+|+++|..
T Consensus 10 ~~mR~~~~~~~d~~ei~~~L~~~~~~~Lat~~---dg~P~v~Pv~f~~~-~~~lyfhta~~~~k~~~l~~np~V~~~v~~ 85 (209)
T 2fur_A 10 KVTRYPERASYSDEDLVAMLDRNFTCTVSFID---GGIPYAIPMMLASE-GKTIYLHGSMKSRIYGILKTGQLIAISLLE 85 (209)
T ss_dssp -------CEECCHHHHHHHHHHCSEEEEEEEE---TTEEEEEEEECEEE-TTEEEEEEETTSHHHHHHHTTCCEEEEEEE
T ss_pred ccccchhhccCCHHHHHHHHHhCCEEEEEEcc---CCEEEEEEEEEEEE-CCEEEEEeCCcCHHHHHhhcCCeEEEEEEc
Confidence 34455555566778999999999999999996 79999999999998 589999999999999999999999999987
Q ss_pred CCCC----------CcceEEEEEEEEEEecch-hHHHHHHHHHHhC-CCCccc---c-----CCCeEEEEEEEeEEEE
Q 020331 157 DPED----------RTDLVITLHGDATSVAEK-DKAAIRAVYLAKH-PNAFWV---D-----FGDFQFMRIEPKAVRY 214 (327)
Q Consensus 157 ~~~~----------~~~~rvtl~G~a~~v~~e-e~~~l~~~y~~~~-P~~~~~---~-----~~df~l~rL~p~~v~~ 214 (327)
.... .....|.+.|+++.++++ +..++.+.+.++| |. .|. . .....+|+|+|+++.-
T Consensus 86 ~~~~v~~~~~~~~t~~y~sV~v~G~a~~v~d~~e~~~~l~~l~~~y~p~-~~~~~~~~~~~~~~~~~virI~i~~isg 162 (209)
T 2fur_A 86 INGIVLAKEIKNNSINYVSALIFGRPYEIDDTEKKIEVFRLLTEKLVKG-RWDNSIKPSYEDLNGVFVFAVKPETFSM 162 (209)
T ss_dssp EEEEEECSBGGGCEEEEEEEEEEECCEECCCHHHHHHHHHHHHHHHSTT-TGGGSBCCCHHHHHTEEEEEECEEEEEE
T ss_pred CCeeecCCCCCCCccEEEEEEEEEEEEEECCHHHHHHHHHHHHHHhCCC-cccccchhhHHhhCCEEEEEEEeEEEEE
Confidence 6411 125679999999999875 5556666666665 54 221 1 2467999999998764
No 32
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=99.38 E-value=8.1e-12 Score=105.25 Aligned_cols=118 Identities=15% Similarity=0.148 Sum_probs=90.1
Q ss_pred CcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcC---CCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcc
Q 020331 87 PPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDA---DGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTD 163 (327)
Q Consensus 87 s~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~---~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~ 163 (327)
...+++++||+++.+|+|||+. +|.|++++++|+++. +|.+||+++ .+.|.+||++||+|++++.....+. .
T Consensus 15 ~~~~e~~~~L~~~~~~~Lat~~---dg~P~v~Pv~f~~~~~~~~~~lyf~ta-~~~K~~~l~~np~V~~~v~~~~~~~-~ 89 (148)
T 3cp3_A 15 LDSSDSLSRLSSESVGRLVVHR---KDDLDIFPVNFVLDYSAEQPRVYFRTA-EGTKLFSVNLNSDVLFEVDRFDDAE-G 89 (148)
T ss_dssp ECHHHHHHHHHTCSEEEEEEEE---TTEEEEEEEEEEEECSSSSCEEEEEEC---CCSSCTTSCSEEEEEEEECC--C-E
T ss_pred CCHHHHHHHHhcCCEEEEEEEe---CCEEEEEEEEEEEEecCCCCEEEEEcC-CCchHHHHhcCCcEEEEEEECCCCC-C
Confidence 4557899999999999999995 899999999999873 578999888 8889999999999999998854221 2
Q ss_pred eEEEEEEEEEEecchh-HHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEEE
Q 020331 164 LVITLHGDATSVAEKD-KAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVRY 214 (327)
Q Consensus 164 ~rvtl~G~a~~v~~ee-~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~~ 214 (327)
..|.+.|+++.+++++ ..++.+. ... .|...+...+++|+|+++.-
T Consensus 90 ~sV~v~G~a~~v~d~~e~~~~l~~----~~~-~~~~~~~~~viri~~~~~tg 136 (148)
T 3cp3_A 90 WSVVLKGNAYVVRDTEEARHADTL----GLK-PWLPTLKYNFVRIDVREVSG 136 (148)
T ss_dssp EEEEEEEEEEECCCHHHHHHHTTS----CCC-CCCTTCCCEEEEEEEEEEEE
T ss_pred eEEEEEEEEEEECCHHHHHHHHhc----ccc-ccCCCCceEEEEEEeEEEEE
Confidence 3799999999998753 3322222 211 44444678999999998764
No 33
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=99.36 E-value=1.5e-11 Score=103.02 Aligned_cols=108 Identities=17% Similarity=0.167 Sum_probs=87.0
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEE--EcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFA--CDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVI 166 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~--~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rv 166 (327)
.++++++|++ .+++|||++ .+|.|++++++|. .| +|.+||.....+.+.+||++||+|+|++.+.+.. .++
T Consensus 29 ~~~~~~~l~~-~~~~LATv~--~dG~P~~~p~~f~~~~d-~~~l~f~~~~~~~k~~nL~~np~V~l~~~~~~~~---~~v 101 (140)
T 2htd_A 29 TEEQVNLFKN-NLVYLATVD--ADGNPQVGPKGSMTVLD-PSHLQYLEKTKGEAYENIKRGSKVALVAADVPSH---TAV 101 (140)
T ss_dssp CHHHHHHHHH-SCEEEEEEC--TTCCEEEEEETTCEEEE-TTEEEEEESSCCHHHHHHHTTCCEEEEEEETTTT---EEE
T ss_pred CHHHHHHHhC-CCEEEEEEC--CCCCEEEecceeEEecC-CCEEEEeccCCchHHHHhhcCCeEEEEEEecCCC---CEE
Confidence 4579999999 999999998 7899999999994 44 5789998899999999999999999999987632 479
Q ss_pred EEEEEEEEecchh-HHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEE
Q 020331 167 TLHGDATSVAEKD-KAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVR 213 (327)
Q Consensus 167 tl~G~a~~v~~ee-~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~ 213 (327)
++.|+++.+++++ .+++ ...+ ..+...+++|+|++++
T Consensus 102 ~i~G~a~~v~d~~~~~~l----~~~~------~~p~~~vi~i~v~~v~ 139 (140)
T 2htd_A 102 RVLATAEVHEDDDYAKKV----LAKT------EFPNAFVVNLNIEEVF 139 (140)
T ss_dssp EEEEEEEEESSSHHHHHH----HTTS------SCTTSEEEEEEEEEEE
T ss_pred EEEEEEEEecChHHHHHH----hhCC------CCceEEEEEEEEEEee
Confidence 9999999998753 3333 2222 2244578999999875
No 34
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=99.30 E-value=3.7e-12 Score=114.56 Aligned_cols=128 Identities=13% Similarity=0.067 Sum_probs=97.9
Q ss_pred CcHHHHHHHHhcCCeEEEEeec--CCCCCcceEEEeeEEEcCCCc--EEEEecCCchHHHhhhhCCceEEEEeeCCC---
Q 020331 87 PPLEEIRTVLDRSVRGMLSTFS--QKYEGYPSGSMVDFACDADGT--PILAVSSLAVHTKDLLANPKCSLLVARDPE--- 159 (327)
Q Consensus 87 s~ae~ar~lL~~~~~~~LATv~--~~~dG~P~~S~v~y~~d~~G~--~~~~vs~~s~htrNL~~dprvSL~V~~~~~--- 159 (327)
...+++++||+++.+|+|+|++ .+.+|.|++++++|+++ +|. +||+++..++|.+||++||+|+++|.....
T Consensus 43 ~d~~ei~~~L~~~~~~~Lat~~~~~~~dg~P~v~Pv~f~~d-~~~~~Lyfhta~~~~K~~~l~~np~V~~~v~~~~~~v~ 121 (216)
T 2vpa_A 43 QSDEWIRELLLRGTIARVATLWQGEDGAAFPFITPLAYAYR-PEQGDLVYHTNVVGRLRANAGQGHPATLEVSEIGQFLP 121 (216)
T ss_dssp CCHHHHHHHHHHCCEEEEEEEEECTTSCEEEEEEEEECEEE-TTTTEEEEECCCCCSSBSSCSSEEEEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCEEEEEEccCCCCCCCceEEEEEEEEEE-CCeeEEEEEecCcCHHHHHhccCCcEEEEEEeCCeecc
Confidence 5678999999999999999995 01279999999999998 566 999988889999999999999999987651
Q ss_pred C-------CcceEEEEEEEEEEecchhHHHHHHHHHHhC-CCC-------ccc--cCCCeEEEEEEEeEEEEE
Q 020331 160 D-------RTDLVITLHGDATSVAEKDKAAIRAVYLAKH-PNA-------FWV--DFGDFQFMRIEPKAVRYV 215 (327)
Q Consensus 160 ~-------~~~~rvtl~G~a~~v~~ee~~~l~~~y~~~~-P~~-------~~~--~~~df~l~rL~p~~v~~v 215 (327)
+ .....|.+.|+++.+++++..++.+.+.+++ |.. .+. ......+|+|+|+++.--
T Consensus 122 ~~~~~~~t~~y~sV~v~G~a~~vd~~e~~~~l~~l~~~y~p~~~~~~~~~~~~~~~l~~~~virI~i~~itgK 194 (216)
T 2vpa_A 122 SNSPLELSVQYRSVMVFGTARVLAGEDARAALTTLSERVFPGLKVGETTRPISEDDLKRTSVYSLSIDRWSGK 194 (216)
T ss_dssp CSSGGGCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHSTTCCBTTTBCCCCHHHHHTCCEEEEEEEEEEEE
T ss_pred CccCCCCcccEEEEEEEEEEEEECHHHHHHHHHHHHHHhCCCCccccccchhhHHhhCCeEEEEEEeeEEEEE
Confidence 1 1256799999999993245556666666654 431 111 123578999999987653
No 35
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=99.28 E-value=4.6e-11 Score=101.61 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=87.3
Q ss_pred HHHHHHHhcCCeEEEEeecCCCC-CcceEEEeeEEE--cCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEE
Q 020331 90 EEIRTVLDRSVRGMLSTFSQKYE-GYPSGSMVDFAC--DADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVI 166 (327)
Q Consensus 90 e~ar~lL~~~~~~~LATv~~~~d-G~P~~S~v~y~~--d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rv 166 (327)
++++++|+..++++|||++ .| |.|+++++.|+. | +|.+||+++..+.|.+||++||+|+|++.+++. .+
T Consensus 12 ~e~~elL~~~~~~~LATv~--~d~G~P~~sp~~~~~~~d-~~~l~f~~~~~~~k~~nl~~np~Vsl~v~~~~~-----~~ 83 (151)
T 2q9k_A 12 EQQMKALTDLPLVFLITHD--QSKSWPITHAISWVYAKD-ETTIRFAIEADSLLVKTLADHPVFTLIFFADQS-----TY 83 (151)
T ss_dssp HHHHHHTSSCCCEEEEECC--TTSSSCEEEEECCEEEEE-TTEEEEEEETTCTHHHHHHHSCCEEEEEEETTE-----EE
T ss_pred HHHHHHHhcCCEEEEEEEc--CCCCcEeEeeeEEEEEeC-CCEEEEEECCCcHHHHHHHhCCcEEEEEECCCC-----EE
Confidence 4899999999999999998 78 999999997774 5 689999999999999999999999999987763 47
Q ss_pred EEEEEEEEecchhHHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEEEEe
Q 020331 167 TLHGDATSVAEKDKAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVRYVS 216 (327)
Q Consensus 167 tl~G~a~~v~~ee~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~~v~ 216 (327)
++.|+++.++++.. . .|. +..++++++++++-+-
T Consensus 84 ~i~G~A~~v~d~~e------------~-~~~---~~~li~v~i~~v~~~~ 117 (151)
T 2q9k_A 84 SLTCTDVAAWETTA------------R-LPL---KVALYEGQIKEVRDIL 117 (151)
T ss_dssp EEEEEEEEEECCSS------------C-CSS---CEEEEEEEEEEEEECS
T ss_pred EEEEEEEEEeCccc------------c-CCc---ceEEEEEEEEEEEEcc
Confidence 99999999987430 0 111 4589999999999874
No 36
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=99.26 E-value=4.9e-11 Score=105.94 Aligned_cols=119 Identities=14% Similarity=0.141 Sum_probs=90.8
Q ss_pred HHHHhcCCeEEEEeecCCCCCcceEEEeeEE-EcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEEEEE
Q 020331 93 RTVLDRSVRGMLSTFSQKYEGYPSGSMVDFA-CDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLHGD 171 (327)
Q Consensus 93 r~lL~~~~~~~LATv~~~~dG~P~~S~v~y~-~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~ 171 (327)
..-+...+.++|||++ .+|.|.+.+|.+. ++++| ++|++...++|.+||++||+|+|++..... ...|.|.|+
T Consensus 25 ~~~~~~~~~~~LATv~--~dG~P~~R~v~~~~~d~~g-l~F~T~~~S~K~~~L~~np~v~l~f~~~~~---~~qvri~G~ 98 (199)
T 1dnl_A 25 EAKLADPTAMVVATVD--EHGQPYQRIVLLKHYDEKG-MVFYTNLGSRKAHQIENNPRVSLLFPWHTL---ERQVMVIGK 98 (199)
T ss_dssp HTTCSCTTEEEEEEEC--TTSCEEEEEEECCEEETTE-EEEEEETTSHHHHHHHHCCEEEEEECCGGG---TEEEEEEEE
T ss_pred HcCcCCCcEEEEEEEC--CCCCEEEEEEEEEEEcCCE-EEEEECCCCHHHHHHhhCCeEEEEEEcCCC---CEEEEEEEE
Confidence 3356788999999998 7899999999884 56555 999999999999999999999999987542 247999999
Q ss_pred EEEecchhHHHH------------------------------HHHHHHhCCCCccccCCCeEEEEEEEeEEEEEec
Q 020331 172 ATSVAEKDKAAI------------------------------RAVYLAKHPNAFWVDFGDFQFMRIEPKAVRYVSG 217 (327)
Q Consensus 172 a~~v~~ee~~~l------------------------------~~~y~~~~P~~~~~~~~df~l~rL~p~~v~~v~G 217 (327)
|+.+++++..+. ...+.++|++......+.|.+|+|.|+++.|..|
T Consensus 99 a~~v~d~~~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~p~p~~~~~~~v~p~~vefw~~ 174 (199)
T 1dnl_A 99 AERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQG 174 (199)
T ss_dssp EEECCHHHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTSSCCCCTTEEEEEECCSEEEEEEC
T ss_pred EEEeCCccHHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccCCCCCCCCceEEEEEECCEEEEEec
Confidence 999987542211 1123444543222233579999999999999865
No 37
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=99.18 E-value=3.4e-10 Score=95.68 Aligned_cols=127 Identities=13% Similarity=0.152 Sum_probs=101.6
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEE-E-cCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEE
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFA-C-DADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVI 166 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~-~-d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rv 166 (327)
.+++.++|..++.++|||.. +|.|.+.++.|. + ..++.+||+++..+.++++|.+||+|+++....+.......|
T Consensus 4 ~~~i~~~L~~~~~~~LAT~~---~g~P~vR~v~f~~~~~~~~~LYF~T~~~k~k~~ql~~Np~V~i~~~~~d~~~~~~~I 80 (145)
T 3ba3_A 4 ISLLKQVVQSTNKIALSTAV---NNEADVKIVNFVWYEAQPDTLYFSSVKTSPALKVYDQNPDIAFITIPNDGTAGNPYL 80 (145)
T ss_dssp CHHHHHHHHTEEEEEEEEEE---TTEEEEEEEECEECTTSTTEEEEEEETTCTHHHHHTTCCEEEEEEEECTTCTTCCEE
T ss_pred HHHHHHHHHhCCcEEEEECC---CCCEEEEEEEEEEEecCCCEEEEEECCCCHHHHHHHhCCCEEEEEECCCCCccceEE
Confidence 35788999999999999964 899999999999 3 346899999999999999999999999986655421134568
Q ss_pred EEE-EEEEEecchhHHHHHHHHHHhCCCC--ccc-cCCCeEEEEEEEeEEEEEecCc
Q 020331 167 TLH-GDATSVAEKDKAAIRAVYLAKHPNA--FWV-DFGDFQFMRIEPKAVRYVSGVA 219 (327)
Q Consensus 167 tl~-G~a~~v~~ee~~~l~~~y~~~~P~~--~~~-~~~df~l~rL~p~~v~~v~GFG 219 (327)
.+. |.|+..+++. .++++.+.++.|.. .|. .-..+.+|+|++.++.+..+-|
T Consensus 81 Ri~~G~a~~~~~~~-~~~k~~~~e~~P~~k~~y~~~~~~l~vf~i~~~~a~~~~~~~ 136 (145)
T 3ba3_A 81 RAQHVKLQRSTKTM-TDLLPQYLETVPNYQQVWDAIGSTLVVFELKLTDLFVDAGVG 136 (145)
T ss_dssp EEEEEEEEECSCCH-HHHHHHHHHHSTTHHHHHHHHGGGEEEEEEECSEEEEECCTT
T ss_pred EEEeEEEEEcCCch-HHHHHHHHHhChhhhhcccCCCCcEEEEEEECCEEEEECCCC
Confidence 889 9999975422 35778889999987 453 2236899999999999987433
No 38
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=99.15 E-value=4.3e-10 Score=103.78 Aligned_cols=118 Identities=16% Similarity=0.173 Sum_probs=91.5
Q ss_pred HhcCCeEEEEeecCCCCCcceEEEeeEE-EcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEEEEEEEE
Q 020331 96 LDRSVRGMLSTFSQKYEGYPSGSMVDFA-CDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDATS 174 (327)
Q Consensus 96 L~~~~~~~LATv~~~~dG~P~~S~v~y~-~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~a~~ 174 (327)
+...+.++|||++ .+|.|.+.+|.+. +|++| ++|++...++|.+||++||+|+|++..... ...|.|.|.|+.
T Consensus 75 l~e~~~~~LATvd--~dG~P~~R~V~lk~~d~~g-l~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~---~rqVrI~G~ae~ 148 (261)
T 1nrg_A 75 IGEANAMCLATCT--RDGKPSARMLLLKGFGKDG-FRFFTNFESRKGKELDSNPFASLVFYWEPL---NRQVRVEGPVKK 148 (261)
T ss_dssp CSCTTEEEEEEEC--TTSCEEEEEEECCCEETTE-EEEEEETTSHHHHHHHHSCEEEEEEEEGGG---TEEEEEEEEEEE
T ss_pred CCCCcEEEEEEEC--CCCCeeEEEEEEEEEcCCE-EEEEECCCChhHHHHhhCCeEEEEEEeCCC---CEEEEEEEEEEE
Confidence 5678899999998 7999999999874 56666 999999999999999999999999987652 247999999999
Q ss_pred ecchhHHHHH------------------------------HHHHHhCCCCccccCCCeEEEEEEEeEEEEEecCc
Q 020331 175 VAEKDKAAIR------------------------------AVYLAKHPNAFWVDFGDFQFMRIEPKAVRYVSGVA 219 (327)
Q Consensus 175 v~~ee~~~l~------------------------------~~y~~~~P~~~~~~~~df~l~rL~p~~v~~v~GFG 219 (327)
+++++..+.- ..+.++||+......+.|.+|+|.|+++.|..|-+
T Consensus 149 v~d~e~~~~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~~~~~~f~~~~vp~p~~w~g~rv~P~~vEfwq~~~ 223 (261)
T 1nrg_A 149 LPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQEVPKPKSWGGYVLYPQVMEFWQGQT 223 (261)
T ss_dssp CCHHHHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTTSCCCCCTTEEEEEECCSEEEEEECCT
T ss_pred ecCcchHHHHhcCChhhhhhhhcCCCCCccCCHHHHHHHHHHHHhhcccCCCCCCCcEEEEEEEccEEEEEECCC
Confidence 9876532210 12344555432233357999999999999997644
No 39
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=99.11 E-value=2.3e-09 Score=96.71 Aligned_cols=116 Identities=15% Similarity=0.191 Sum_probs=87.8
Q ss_pred HHHhcCCeEEEEeecCCCCCcceEEEeeEE-EcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEEEEEE
Q 020331 94 TVLDRSVRGMLSTFSQKYEGYPSGSMVDFA-CDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDA 172 (327)
Q Consensus 94 ~lL~~~~~~~LATv~~~~dG~P~~S~v~y~-~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~a 172 (327)
.-+...+.++|||++ .||.|.+.+|.+. +|++| ++|++...++|.++|.+||+|+|++..... ...|.|.|+|
T Consensus 51 ~~~~~~~~~~LATvd--~dG~P~~R~v~l~~~d~~g-l~F~T~~~S~K~~eL~~nP~val~f~~~~~---~rqvrI~G~a 124 (222)
T 1ty9_A 51 VGIREPRALALATAD--SQGRPSTRIVVISEISDAG-VVFSTHAGSQKGRELLHNPWASGVLYWRET---SQQIILNGQA 124 (222)
T ss_dssp HTCSSTTEEEEEEEC--TTCCEEEEEEECCEECSSE-EEEEEETTSHHHHHHHHCCEEEEEEEETTT---TEEEEEEEEE
T ss_pred hccCCCCEEEEEEEC--CCCCEEEEEEEEEEEcCCE-EEEEECCCCcchHHHhhCCeEEEEEEcCCC---CeEEEEEEEE
Confidence 346677899999998 7899999999874 56555 999999999999999999999999988652 2469999999
Q ss_pred EEecchhHHHHHHHHHHh-----------------------------CCC-C-ccccCCCeEEEEEEEeEEEEEecC
Q 020331 173 TSVAEKDKAAIRAVYLAK-----------------------------HPN-A-FWVDFGDFQFMRIEPKAVRYVSGV 218 (327)
Q Consensus 173 ~~v~~ee~~~l~~~y~~~-----------------------------~P~-~-~~~~~~df~l~rL~p~~v~~v~GF 218 (327)
+.+++++..+ .|..+ ++. . .....+.|.+|+|+|+++.|..|-
T Consensus 125 e~v~~~~~~~---~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~~~~~~~~~~p~p~~w~~~rv~P~~vEfwq~~ 198 (222)
T 1ty9_A 125 VRLPNAKADD---AWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAELQGPLPRPEGYCVFELRLESLEFWGNG 198 (222)
T ss_dssp EECCHHHHHH---HHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHHHHHTSCSCCCCCTTEEEEEEEEEEEEEEEEE
T ss_pred EEEccHHhHH---HHHhCccccccceeeccCCCcCCChHHHHHHHHHHhhccCCCCCCCCEEEEEEEeeEEEEEECC
Confidence 9998654321 22211 000 0 112335799999999999998753
No 40
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=99.06 E-value=4.4e-09 Score=95.30 Aligned_cols=118 Identities=14% Similarity=0.099 Sum_probs=91.3
Q ss_pred HhcCCeEEEEeecCCCCCcceEEEeeEE-EcCCCcEEEEecCC-chHHHhhhhCCceEEEEeeCCCCCcceEEEEEEEEE
Q 020331 96 LDRSVRGMLSTFSQKYEGYPSGSMVDFA-CDADGTPILAVSSL-AVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDAT 173 (327)
Q Consensus 96 L~~~~~~~LATv~~~~dG~P~~S~v~y~-~d~~G~~~~~vs~~-s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~a~ 173 (327)
+...+.++|||++. .+|.|.+.+|.+. +|++| ++|++... ++|.++|.+||+|+|++..+.. ...|.|.|.++
T Consensus 52 ~~~~~~~~LATvd~-~dG~P~~R~V~lk~~d~~g-~~F~Tn~~~S~K~~eL~~NP~val~f~~~~~---~rqVrI~G~ae 126 (228)
T 1ci0_A 52 ETLPEAITFSSAEL-PSGRVSSRILLFKELDHRG-FTIYSNWGTSRKAHDIATNPNAAIVFFWKDL---QRQVRVEGITE 126 (228)
T ss_dssp CSCTTEEEEEEEET-TTTEEEEEEEECCEECSSS-EEEEEECSSSHHHHHHHHCCEEEEEEEETTT---TEEEEEEEEEE
T ss_pred CCCCCEEEEEEeeC-CCCCeEEEEEEEEEECCCE-EEEEeCCCCCcchHHHhhCCeEEEEEEeCCC---CEEEEEEEEEE
Confidence 56788999999961 2899999999884 56666 99999999 9999999999999999988752 24699999999
Q ss_pred Eecchh------------------------------HHHHHHHHHHhCCCCc-cccCCCeEEEEEEEeEEEEEecC
Q 020331 174 SVAEKD------------------------------KAAIRAVYLAKHPNAF-WVDFGDFQFMRIEPKAVRYVSGV 218 (327)
Q Consensus 174 ~v~~ee------------------------------~~~l~~~y~~~~P~~~-~~~~~df~l~rL~p~~v~~v~GF 218 (327)
.+++++ ..+....+.++|++.. ....+.+..|+|.|+++.|..|-
T Consensus 127 ~v~~~~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~~~~~~~~~f~~~~~~p~p~~w~g~rv~P~~iEfWq~~ 202 (228)
T 1ci0_A 127 HVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPCPDYWGGLRIVPLEIEFWQGR 202 (228)
T ss_dssp ECCHHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTSCSSCCCCTTEEEEEEEEEEEEEEECC
T ss_pred EcCchhhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEEEEccEEEEeeCC
Confidence 995432 1222334455676543 44556799999999999999763
No 41
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=98.98 E-value=6.5e-09 Score=95.05 Aligned_cols=115 Identities=17% Similarity=0.142 Sum_probs=88.8
Q ss_pred HhcCCeEEEEeecCCCCCcceEEEeeEE-EcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEEEEEEEE
Q 020331 96 LDRSVRGMLSTFSQKYEGYPSGSMVDFA-CDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDATS 174 (327)
Q Consensus 96 L~~~~~~~LATv~~~~dG~P~~S~v~y~-~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~a~~ 174 (327)
+...+.++|||++ +|.|.+-+|.+. +|++| ++|+++..++|.++|.+||+|+|++..+.. ...|.|.|.|+.
T Consensus 77 ~~e~~~~~LATvd---dG~P~~R~Vllk~~d~~g-l~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~---~rqVrI~G~ae~ 149 (246)
T 2a2j_A 77 VSEPNAMVLATVA---DGKPVTRSVLCKILDESG-VAFFTSYTSAKGEQLAVTPYASATFPWYQL---GRQAHVQGPVSK 149 (246)
T ss_dssp CSSTTEEEEEEEE---TTEEEEEEEEEEEEETTE-EEEEEETTSHHHHHHHHSCEEEEEEEEGGG---TEEEEEEEEEEE
T ss_pred CCCCceEEEEEcC---CCceEEEEEEEEEEcCCE-EEEEEcCCChhhHHHhhCCeEEEEEEeCCC---CEEEEEEEEEEE
Confidence 4577899999996 799999999874 56556 999999999999999999999999987652 246999999999
Q ss_pred ecchhHH------------------------------HHHHHHHHhCCCC-ccccCCCeEEEEEEEeEEEEEec
Q 020331 175 VAEKDKA------------------------------AIRAVYLAKHPNA-FWVDFGDFQFMRIEPKAVRYVSG 217 (327)
Q Consensus 175 v~~ee~~------------------------------~l~~~y~~~~P~~-~~~~~~df~l~rL~p~~v~~v~G 217 (327)
+++++.. +..+.+.++|++. .....+.|..|+|.|+++.|..|
T Consensus 150 v~~~es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~~~~~f~~~~~vp~pp~w~g~rv~P~~iEfWqg 223 (246)
T 2a2j_A 150 VSTEEIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFADQDQIPVPPGWGGYRIAPEIVEFWQG 223 (246)
T ss_dssp CCHHHHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTTCSSCCCCTTEEEEEECCSEEEEEEC
T ss_pred eccHhHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHHHHHhcccCCCCCCCCcEEEEEEEcCEEEEccC
Confidence 9654321 1122344455543 33445679999999999999875
No 42
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=98.95 E-value=9.3e-09 Score=90.85 Aligned_cols=116 Identities=14% Similarity=0.136 Sum_probs=85.0
Q ss_pred CCeEEEEeecCCCCCcceEEEeeEE-EcCC-CcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEEEEEEEEec
Q 020331 99 SVRGMLSTFSQKYEGYPSGSMVDFA-CDAD-GTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDATSVA 176 (327)
Q Consensus 99 ~~~~~LATv~~~~dG~P~~S~v~y~-~d~~-G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~a~~v~ 176 (327)
.+.++|||++ .+|.|.+.+|.+. +|++ +.++|++...++|.+||.+||+|+|++..+.. ...|.|.|+|+.++
T Consensus 24 ~~~~~LATv~--~dG~P~~R~v~~~~~d~~~~~l~F~T~~~S~K~~~l~~np~v~l~f~~~~~---~~qvri~G~a~~v~ 98 (195)
T 2i51_A 24 ARYLQLATVQ--PNGRPANRTLVFRGFLEDTNQLRFITDTRSAKADQIQQQPWAEICWYFPNT---REQFRMAGDLTLIS 98 (195)
T ss_dssp GGEEEEEEEC--TTSCEEEEEEECCCBCTTSSCEEEEEETTSHHHHHHHHCCEEEEEEEETTT---TEEEEEEEEEEEEC
T ss_pred CCEEEEEEEC--CCCCeeEEEEEEEEEcCCCCeEEEEEcCCccHHHHHhhCCeEEEEEEeCCC---CEEEEEEEEEEEEC
Confidence 3489999998 7999999998874 4544 46999999999999999999999999987662 23699999999998
Q ss_pred chhHH----HHHHHHHHhCCCC---------------------------ccccCCCeEEEEEEEeEEEEEecCc
Q 020331 177 EKDKA----AIRAVYLAKHPNA---------------------------FWVDFGDFQFMRIEPKAVRYVSGVA 219 (327)
Q Consensus 177 ~ee~~----~l~~~y~~~~P~~---------------------------~~~~~~df~l~rL~p~~v~~v~GFG 219 (327)
+++.. ..+..|....|.. .....+.|..|+|.|++|.|..|-.
T Consensus 99 ~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg~~~~~~~~~~~~~~~~~~p~p~~w~~~~v~P~~iefwq~~~ 172 (195)
T 2i51_A 99 SDDSHQDLQPARIAMWQELSDAARLQFGWPYPGKPRIKESGAFEPSPPDPIEPVPNFCLLLLDPVQVDHLELRG 172 (195)
T ss_dssp SSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTTSBCCCCGGGGCCCCCCSSSCCTTEEEEEEEEEEEEEEESSS
T ss_pred hHHhhhhhHHHHHHHHHhCChhhhhhcccCCCCCCccchhHHhhhhccCCCCCCCceEEEEEEccEEEEEecCC
Confidence 65421 1222222221110 0112357899999999999987643
No 43
>2ol5_A PAI 2 protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.50A {Geobacillus stearothermophilus}
Probab=98.94 E-value=8.2e-09 Score=91.73 Aligned_cols=121 Identities=7% Similarity=0.014 Sum_probs=93.9
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCC-CcEEEEecCCchHHHhhhhCCceEEEEeeCC-----CC--
Q 020331 89 LEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDAD-GTPILAVSSLAVHTKDLLANPKCSLLVARDP-----ED-- 160 (327)
Q Consensus 89 ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~-G~~~~~vs~~s~htrNL~~dprvSL~V~~~~-----~~-- 160 (327)
.+++.+||+.+.+|+|+|.+ +|.|++++++|+++++ +.+|++++...++.++|.. ++|+++|..+. .+
T Consensus 12 ~~~i~~il~~~~~g~L~~~~---~~~py~~plpf~~~~~~~~Ly~H~A~~n~k~~~l~~-~~V~~~~~g~~~yisps~y~ 87 (202)
T 2ol5_A 12 PDVAYQVIEENSFATLVSMH---QRELFATHLPLLLDREKTCLYGHFARSNPQWNDIQH-QTVLAIFHGPHCYISPSWYE 87 (202)
T ss_dssp CTHHHHHHHHSCEEEEEEEE---TTEEEEEEEECEECTTSSEEEEEEETTSGGGGGCTT-SCEEEEEEEEEEEECGGGSS
T ss_pred HHHHHHHHHHCCEEEEEEcc---CCccEEEEeeEEEECCCCEEEEEECCcChHHHhhCC-CCEEEEEEcCCEEechhhcc
Confidence 35799999999999999996 6899999999999843 4899999999999999999 99999988654 11
Q ss_pred -------CcceEEEEEEEEEEecc-hhHHHHHHHHHHhC-CCC--cc--------c--cCCCeEEEEEEEeEEE
Q 020331 161 -------RTDLVITLHGDATSVAE-KDKAAIRAVYLAKH-PNA--FW--------V--DFGDFQFMRIEPKAVR 213 (327)
Q Consensus 161 -------~~~~rvtl~G~a~~v~~-ee~~~l~~~y~~~~-P~~--~~--------~--~~~df~l~rL~p~~v~ 213 (327)
-.+..|.+.|+++.++| +|...+...+.++| |.. .| . .+.....|+|+++++.
T Consensus 88 ~~~~vpT~nY~SV~~~G~~~~v~D~~ek~~~L~~L~~~~e~~~~~~w~~~~~~~~~~~~l~~i~v~~I~I~~i~ 161 (202)
T 2ol5_A 88 TNQAVPTWNYVAVHVYGNVELINDQGEVMQSLHDMVEKYEAPGSRYQLSEVDAGMLSGMNKGIQAFKIIIKRIE 161 (202)
T ss_dssp CSCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHSCTTCCCCCC------CTHHHHSEEEEEEEEEEEE
T ss_pred cCCCCCCcceEEEEEEEEEEEECCHHHHHHHHHHHHHHhcCCCCCCccccCCHHHHHHHhCCeEEEEEEEeEEE
Confidence 15788999999999985 56555555555543 331 34 1 1235689999999763
No 44
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=98.92 E-value=6.6e-09 Score=90.32 Aligned_cols=115 Identities=12% Similarity=0.112 Sum_probs=82.3
Q ss_pred CCeEEEEeecCCCCCcceEEEeeE-EEc-CCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceEEEEEEEEEEec
Q 020331 99 SVRGMLSTFSQKYEGYPSGSMVDF-ACD-ADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDATSVA 176 (327)
Q Consensus 99 ~~~~~LATv~~~~dG~P~~S~v~y-~~d-~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~a~~v~ 176 (327)
.+.++|||++ .+| |.+-+|.+ .++ +++.++|++...+.|.+||++||+|+|++..++. ...|.|.|+++.++
T Consensus 29 ~~~~~LATv~--~dG-P~~R~v~~~~~~~~~~~l~F~T~~~s~K~~~l~~nP~v~l~f~~~~~---~~qvri~G~a~~~~ 102 (175)
T 2ou5_A 29 ARHPTLATIG--TDG-PDLRTLVLRAASHAEATLEFHTDAASPKVAHIRRDARVAIHIWIPKA---SLQVRAKAIAKILP 102 (175)
T ss_dssp GGSCEEEEEE--TTE-EEEEECCCCEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEEEGGG---TEEEEEEEEEEEEE
T ss_pred cceEEEEEeC--CCC-CceeEEEEEEEEcCCCEEEEEECCCChHHHHHhhCCcEEEEEEeCCC---CEEEEEEEEEEEeC
Confidence 4789999998 789 99977655 455 3477999999999999999999999999987652 23688999999997
Q ss_pred chh--HHH----HHHHHHHhCCCCcc-----ccCCCeEEEEEEEeEEEEEecCc
Q 020331 177 EKD--KAA----IRAVYLAKHPNAFW-----VDFGDFQFMRIEPKAVRYVSGVA 219 (327)
Q Consensus 177 ~ee--~~~----l~~~y~~~~P~~~~-----~~~~df~l~rL~p~~v~~v~GFG 219 (327)
+++ +.. .+..|....|.... ...++|.+|+|+|+++.|..|-+
T Consensus 103 d~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~v~p~~vefw~~~~ 156 (175)
T 2ou5_A 103 GDPNLFAQLPEAARMNYQGPVPGTPLPAEPDATPNRFTRLICHLSEIDVLHLTT 156 (175)
T ss_dssp CCHHHHHHSCHHHHGGGSSSCTTCBSSCCCCCCSCCEEEEEEEEEEEEEEECCS
T ss_pred cHHHHHHHCCHhHHhcccCCCCCCccccccCCCCCcEEEEEEEeeEEEEEeCCC
Confidence 751 111 00112111122111 12367999999999999997543
No 45
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=98.30 E-value=9.9e-06 Score=66.24 Aligned_cols=102 Identities=21% Similarity=0.275 Sum_probs=77.3
Q ss_pred hcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecC-C----chHHHhhhhCCceEEEEeeCCCCCcceEEEEEEE
Q 020331 97 DRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSS-L----AVHTKDLLANPKCSLLVARDPEDRTDLVITLHGD 171 (327)
Q Consensus 97 ~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~-~----s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~ 171 (327)
.......|.|.+. .+|.|+.++++|..++ |.+++..|. . ..-++||++||+|+|.+.. -++.++
T Consensus 13 ~g~p~~~Ltt~GR-kSG~pr~tPv~~~~~g-~~~~vvas~~G~~~~p~W~~Nl~A~P~v~v~~~~---------~~~~~~ 81 (122)
T 3r5l_A 13 QKIPVALLTTTGR-KTGQPRVNPLYFLRDG-GRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKK---------EVLDLT 81 (122)
T ss_dssp TSCCCEEEEEECT-TTCSEEEEEEEEEEET-TEEEEECSCCGGGCSCHHHHHHHHCCEEEEEETT---------EEEEEE
T ss_pred cCCcEEEEEEcCC-CCCCEEEEEEEEEEEC-CEEEEEEecCCCCCCCHHHHhhccCCcEEEEECC---------EEEEEE
Confidence 3567889999963 4799999999999874 556554442 3 3459999999999998821 257788
Q ss_pred EEEecchhHHHHHHHHHHhCCCC-ccccC--CCeEEEEEEE
Q 020331 172 ATSVAEKDKAAIRAVYLAKHPNA-FWVDF--GDFQFMRIEP 209 (327)
Q Consensus 172 a~~v~~ee~~~l~~~y~~~~P~~-~~~~~--~df~l~rL~p 209 (327)
++.++++|..++..++.+++|.- .|... -...+|+|+|
T Consensus 82 A~~l~~~Er~~~~~~~~~~~p~y~~yq~~t~R~ipv~~L~p 122 (122)
T 3r5l_A 82 ARDATDEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 122 (122)
T ss_dssp EEECCHHHHHHHHHHHHHHCTTCCCTTGGGCTTSCEEEEEC
T ss_pred EEECCcchHHHHHHHHHHHCcCHHHHHhhcCCcccEEEEeC
Confidence 99999988889999999999975 66532 2456777764
No 46
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=98.26 E-value=2.7e-05 Score=63.63 Aligned_cols=108 Identities=12% Similarity=0.079 Sum_probs=81.4
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCcceEEEee--EE--EcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCC----CCC
Q 020331 90 EEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVD--FA--CDADGTPILAVSSLAVHTKDLLANPKCSLLVARDP----EDR 161 (327)
Q Consensus 90 e~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~--y~--~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~----~~~ 161 (327)
|+..++|.....+.|+|.+ +|.|+..+.| |. .| |..+++.........+||+.||++++++.+.+ ..
T Consensus 4 e~~~e~l~~~~~~~iaT~~---~g~Pnvvptw~~~~~v~d-D~~ili~~~~~~kT~~Nl~~N~kvai~v~~~e~~g~~g- 78 (122)
T 3a6r_A 4 GTFFEVLKNQGVVAIATQG---EDGPHLVNTWNSYLKVLD-GNRIVVPVGGMHKTEANVARDERVLMTLGSRKVAGRNG- 78 (122)
T ss_dssp HHHHHHTTSCCEEEEEEEC---SSSEEEEEEEGGGCEEET-TTEEEEEESSCHHHHHHHHHCCEEEEEEEEEEEECSSS-
T ss_pred HHHHHHHhcCCeEEEEEcC---CCCCcEEeeeceEEEEec-CCEEEEEccccHHHHHHHhhCCeEEEEEEecccccccC-
Confidence 5788889877889999996 8999998843 43 45 67888877888888999999999999998765 12
Q ss_pred cceEEEEEEEEEEecc-hhHHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEEE
Q 020331 162 TDLVITLHGDATSVAE-KDKAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVRY 214 (327)
Q Consensus 162 ~~~rvtl~G~a~~v~~-ee~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~~ 214 (327)
.....++.|+++.+.+ +..+.. +++|. -...+.|++++++-
T Consensus 79 ~~~gf~ikGta~~~~~G~~fd~~-----~k~~~-------~k~vlvi~i~~i~q 120 (122)
T 3a6r_A 79 PGTGFLIRGSAAFRTDGPEFEAI-----ARFKW-------ARAALVITVVSAEQ 120 (122)
T ss_dssp EEEEEEEEEEEEEESSSHHHHTT-----TTSTT-------CSEEEEEEEEEEEE
T ss_pred CCceEEEEEEEEEEeccHHHHHH-----hccCc-------ccEEEEEEEEEEEE
Confidence 3356999999999976 444333 23332 34677899998863
No 47
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=98.26 E-value=2.2e-05 Score=66.02 Aligned_cols=121 Identities=16% Similarity=0.079 Sum_probs=79.2
Q ss_pred HHHHHHHHhc-CCeEEEEeecCCCCCcceEEEeeE--EEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeCCCCCcceE
Q 020331 89 LEEIRTVLDR-SVRGMLSTFSQKYEGYPSGSMVDF--ACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLV 165 (327)
Q Consensus 89 ae~ar~lL~~-~~~~~LATv~~~~dG~P~~S~v~y--~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~~~~~~~r 165 (327)
.|.+|+|++. ...|+|||.+ .||.|.++++.. .+| ++.++|.-.....-.+||++||++++++...+++.....
T Consensus 19 ~~~~r~l~~~~v~~~~LATAd--kdG~PNVa~~~~~~~~D-d~tI~iad~f~~kT~~NL~eNP~aav~~~~~~~~~~~KG 95 (148)
T 3in6_A 19 LEKARSLINANYISTTLSTVD--RNYEVNIAVISVLEMIG-DDTIICARFGADKTYANLKETGKGVFMVLLTDNDKSKDG 95 (148)
T ss_dssp HHHHHHHHHHTCSSEEEEEEC--TTCCEEEEECCCEEEET-TTEEEEEESSCHHHHHHHHHHCEEEEEEEEESSSCEEEE
T ss_pred HHHHHHHHhCCcceEEEEEcC--CCCCccEEEEeeeEEec-CCEEEEEeccchhHHHHHHhCCcEEEEEEEcCCCCccce
Confidence 4679999987 5799999998 799999998763 345 466655334455668999999999999985443333445
Q ss_pred EEEEEEEEEec--chhHHHHHHHHHHhCCCCccccCCCeEEEEEEEeEEEEEe
Q 020331 166 ITLHGDATSVA--EKDKAAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVRYVS 216 (327)
Q Consensus 166 vtl~G~a~~v~--~ee~~~l~~~y~~~~P~~~~~~~~df~l~rL~p~~v~~v~ 216 (327)
..|.+....+. ++..+.+++...+.- ...++-..++.+++++++-+.
T Consensus 96 ~Rl~l~~~e~~t~G~~fe~mk~~l~~~~----~~~fp~K~~~V~kI~~I~pv~ 144 (148)
T 3in6_A 96 IRVYVELSADLQEGEYFDRIKKRLDNTT----YKNFPLKNCLVFKIVKILPVS 144 (148)
T ss_dssp EEEEEEEEEEESSSHHHHHHHHHHHTSG----GGGSCCCEEEEEEEEEEECSC
T ss_pred EEEEEEEEEEecCcHhHHHHHHHHhhhc----ccCCCcceeEEEEEEEEEehh
Confidence 55555555543 355666665554411 112222355567777776553
No 48
>3h96_A F420-H2 dependent reductase A; pnpox, flavin, aflatoxin, flavoprotein; 2.00A {Mycobacterium smegmatis str}
Probab=97.79 E-value=0.00012 Score=61.32 Aligned_cols=105 Identities=12% Similarity=0.094 Sum_probs=79.5
Q ss_pred HhcCCeEEEEeecCCCCCcceEEEeeEEEcCC--CcEEEEecC-----CchHHHhhhhCCceEEEEeeCCCCCcceEEEE
Q 020331 96 LDRSVRGMLSTFSQKYEGYPSGSMVDFACDAD--GTPILAVSS-----LAVHTKDLLANPKCSLLVARDPEDRTDLVITL 168 (327)
Q Consensus 96 L~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~--G~~~~~vs~-----~s~htrNL~~dprvSL~V~~~~~~~~~~rvtl 168 (327)
+.......|.|.+. ..|.|+.+++.|..+++ |.+++..|. ...-++||+++|+|.+.+.. -++
T Consensus 27 ~~g~~~llLtt~GR-kSG~~r~tPl~~~~~g~~~~~~~vvas~gG~~~~p~W~~Nl~A~p~v~v~~g~---------~~~ 96 (143)
T 3h96_A 27 FEGAPMVLVHHVGR-KTGKAAVTPMMYLPSDDDPGTIYVFASKAGAASNPAWYYNLTTAGTAQVEVGT---------ETY 96 (143)
T ss_dssp GTTSCEEEEEEECT-TTCCEEEEEEECEECSSCTTEEEEECCGGGCSSCCHHHHHHHHHSEEEEEETT---------EEE
T ss_pred ccCCcEEEEEEcCC-CCCCEEEEEEEEEEecCcCCcEEEEEcCCCCCCCChHHHhhhhCCcEEEEECC---------EEE
Confidence 35678899999963 47999999999998752 566554443 24569999999999988721 257
Q ss_pred EEEEEEecchhHHHHHHHHHHhCCCC-cccc-C---CCeEEEEEEEe
Q 020331 169 HGDATSVAEKDKAAIRAVYLAKHPNA-FWVD-F---GDFQFMRIEPK 210 (327)
Q Consensus 169 ~G~a~~v~~ee~~~l~~~y~~~~P~~-~~~~-~---~df~l~rL~p~ 210 (327)
.++++.++++|..++-.+|.+++|.- .|.. . -...+|+|+|.
T Consensus 97 ~~~A~~~~~~Er~~~~~~~~~~~P~y~~Yq~~t~~~R~iPv~~L~p~ 143 (143)
T 3h96_A 97 AVGVTEVTGEDRDRIYSEQARRYPGFADYEKKTAGIRTIPVLALTRT 143 (143)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHCTHHHHHHHHTTTTCCCCEEEEEEC
T ss_pred EEEEEecCchHHHHHHHHHHHHCcCHHHHHHhcCCCCcccEEEEeeC
Confidence 78888999999999999999999975 5532 1 35678888763
No 49
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=97.70 E-value=0.00019 Score=60.41 Aligned_cols=101 Identities=19% Similarity=0.117 Sum_probs=76.1
Q ss_pred cCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCC-----chHHHhhhhCCceEEEEeeCCCCCcceEEEEEEEE
Q 020331 98 RSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSL-----AVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDA 172 (327)
Q Consensus 98 ~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~-----s~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~a 172 (327)
......|.|.+. ..|.|+.+++.|..+ +|.+++..|.. ..-++||+++|+|.+.+. +-++.+++
T Consensus 38 g~p~~lLtt~GR-kSG~~r~tPl~~~~~-~g~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g---------~~~~~~~A 106 (147)
T 3r5y_A 38 GRPLVILTTVGR-KTGALRKTPVMRVEH-DGRYAVVASQGGAPTHPAWYFNLVADPRAQLRDK---------DAVLSVVA 106 (147)
T ss_dssp TEEEEEEEEECT-TTCCEEEEEEECCEE-TTEEEEECCGGGCSSCCHHHHHHHHCCEEEEEET---------TEEEEEEE
T ss_pred CccEEEEEEcCC-CCCCEEEEEEEEEEE-CCEEEEEEcCCCCCCCChHHHhhhhCCcEEEEEC---------CEEEEEEE
Confidence 456788888863 479999999999987 46666644432 255999999999998872 12577889
Q ss_pred EEecchhHHHHHHHHHHhCCCC-ccccC--CCeEEEEEEE
Q 020331 173 TSVAEKDKAAIRAVYLAKHPNA-FWVDF--GDFQFMRIEP 209 (327)
Q Consensus 173 ~~v~~ee~~~l~~~y~~~~P~~-~~~~~--~df~l~rL~p 209 (327)
+.++++|..++-.+|.+.+|.- .|... -...+|+|+|
T Consensus 107 r~~~~~Er~~~w~~~~~~~P~y~~Yq~~t~R~IPv~~L~p 146 (147)
T 3r5y_A 107 RELAGPERAEWWERAVRAYPTYQEYQDNTRRLIPVLLLEP 146 (147)
T ss_dssp EECCHHHHHHHHHHHHHHCTHHHHHHHTCSSCCCEEEEEE
T ss_pred EECCchHHHHHHHHHHHHCCCHHHHHhhcCCcCcEEEEeC
Confidence 9999999899999999999975 55432 2456777776
No 50
>3r5z_A Putative uncharacterized protein; split barrel-like fold, DUF385, deazaflavin-dependent reduct F420-dependent reductase, FDR; HET: F42; 1.50A {Nocardia farcinica}
Probab=97.65 E-value=0.00031 Score=58.96 Aligned_cols=101 Identities=15% Similarity=0.054 Sum_probs=76.4
Q ss_pred cCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCC-c----hHHHhhhhCCceEEEEeeCCCCCcceEEEEEEEE
Q 020331 98 RSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSL-A----VHTKDLLANPKCSLLVARDPEDRTDLVITLHGDA 172 (327)
Q Consensus 98 ~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~-s----~htrNL~~dprvSL~V~~~~~~~~~~rvtl~G~a 172 (327)
......|.|.+. ..|.|+.+++.|..++ |..++..|.. + .=++||+++|+|.+.+.. -++.+++
T Consensus 36 g~p~~lLtt~GR-kSG~~r~tPl~~~~~~-~~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g~---------~~~~~~A 104 (145)
T 3r5z_A 36 GKPVVVLTTKGA-KTGKLRKTPLMRVEHN-GEYAVVASLGGAPKHPVWYHNIKAEPHVELRDGT---------EVGDYTA 104 (145)
T ss_dssp TEEEEEEEEECT-TTCCEEEEEEECEEET-TEEEEECCBTTBSSCCHHHHHHHHCCEEEEEETT---------EEEEEEE
T ss_pred CceEEEEEEcCC-CCCCEEEEEEEEEEEC-CEEEEEEcCCCCCCCChHHHHhhhCCcEEEEECC---------EEEEEEE
Confidence 446788888863 5699999999999874 5566655543 2 459999999999988721 2567788
Q ss_pred EEecchhHHHHHHHHHHhCCCC-ccccC--CCeEEEEEEE
Q 020331 173 TSVAEKDKAAIRAVYLAKHPNA-FWVDF--GDFQFMRIEP 209 (327)
Q Consensus 173 ~~v~~ee~~~l~~~y~~~~P~~-~~~~~--~df~l~rL~p 209 (327)
+.++++|..++-.++.+.+|.- .|... -...+|+|+|
T Consensus 105 r~~~~~Er~~~w~~~~~~~p~y~~Yq~~t~R~iPv~~L~p 144 (145)
T 3r5z_A 105 REVTGEEKRVWWERAVEVWPDYAEYQTKTTREIPVFVLTP 144 (145)
T ss_dssp EECCHHHHHHHHHHHHHHCTHHHHHGGGCSSCCCEEEEEE
T ss_pred EECCchHHHHHHHHHHHHCcCHHHHHHhcCCcCceEEEEe
Confidence 8999989889999999999975 55432 3457888876
No 51
>2ptf_A Uncharacterized protein MTH_863; structural genomics, unknown function, PSI-2, protein struct initiative; HET: FMN; 2.35A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.4
Probab=59.58 E-value=22 Score=31.46 Aligned_cols=54 Identities=15% Similarity=0.187 Sum_probs=41.3
Q ss_pred eEEEEeecCCCCCcceEEEeeEEEcCCC-cEEEEecCCchHHHhhhhCCceEEEEeeC
Q 020331 101 RGMLSTFSQKYEGYPSGSMVDFACDADG-TPILAVSSLAVHTKDLLANPKCSLLVARD 157 (327)
Q Consensus 101 ~~~LATv~~~~dG~P~~S~v~y~~d~~G-~~~~~vs~~s~htrNL~~dprvSL~V~~~ 157 (327)
-.+++|.+ .+|.+..+|+.|... ++ .+++.+...+.-.+||.+.+.+.+-|.++
T Consensus 37 e~vVtT~~--~dG~~NlAP~s~~~~-~~~~~~i~i~~~k~T~~NI~~tgefVVNi~~d 91 (233)
T 2ptf_A 37 ETIVVTWD--DSMVGNAAPIGVLCT-GDDTVTLYLYQGTRTVENVLNNGRFTVNVTLD 91 (233)
T ss_dssp EEEEEEEC--TTCCEEEEEEEEEEC-SSSEEEEEEETTCHHHHHHHHHSEEEEEECCC
T ss_pred EEEEEEeC--CCCCEeeccEEEEEc-CCCCEEEEEcCCChHHHHHHhCCEEEEEECCH
Confidence 44577887 789999999988865 44 45554455667799999999999988763
No 52
>3e4v_A NADH:FMN oxidoreductase like protein; YP_544701.1, structural genomics, joint center for structural genom JCSG; HET: MSE FMN; 1.40A {Methylobacillus flagellatus KT}
Probab=51.18 E-value=25 Score=29.51 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=44.9
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEE--cCC-CcEEEEecCCchHHHhhhhCCceEEEEeeC
Q 020331 90 EEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFAC--DAD-GTPILAVSSLAVHTKDLLANPKCSLLVARD 157 (327)
Q Consensus 90 e~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~--d~~-G~~~~~vs~~s~htrNL~~dprvSL~V~~~ 157 (327)
++++.+|--...++++|.+ .+|.|.+.++.+.. ..+ -.+.+.+...+.-.+||.+..+.++.|...
T Consensus 9 ~~~~~~l~p~pV~vVTt~~--~~g~~n~~t~s~~~~vs~~PPlv~v~i~~~~~t~~~i~~~g~F~Vnvl~~ 77 (186)
T 3e4v_A 9 ENAYRILESGPIVLVSTRG--ADGRANLMTMGFHMMMQHEPPLVGAIIGPWDYSHQALSETGECVLAVPTV 77 (186)
T ss_dssp GGGHHHHTTCCCEEEEEEC--TTSCEEEEEECCEEEEETTTTEEEEECCTTSTHHHHHHHHCEEEEEECCG
T ss_pred HHhccccCCCceEEEEEeC--CCCceEEEEhhhhhhhcCCCCEEEEEEcChhHHHHHHHHCCeEEEEeCCH
Confidence 3567788777788899876 58888776655432 212 223444455666689999999988887654
No 53
>2iml_A Hypothetical protein; FMN binding, PSI-2, structural genomics, protein structure initiative; HET: FMN; 1.65A {Archaeoglobus fulgidus} SCOP: b.45.1.4
Probab=46.74 E-value=44 Score=28.69 Aligned_cols=55 Identities=9% Similarity=-0.052 Sum_probs=40.8
Q ss_pred eEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEe-cCCchHHHhhhhCCceEEEEeeC
Q 020331 101 RGMLSTFSQKYEGYPSGSMVDFACDADGTPILAV-SSLAVHTKDLLANPKCSLLVARD 157 (327)
Q Consensus 101 ~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~v-s~~s~htrNL~~dprvSL~V~~~ 157 (327)
...++|.+ .+|.+...|..+....+..+.+.+ ...+...+||.+.+.+.+-+.++
T Consensus 16 ev~VtT~~--~~G~~N~AP~s~~~~~~~~~~v~~~~~~k~T~~NI~~~gefVvNi~~d 71 (199)
T 2iml_A 16 EIIAITEN--EDGSWNAAPIGIIVEDSSSDTAKAKLYRNRTRANLERSGVLFANVTDD 71 (199)
T ss_dssp EEEEEEEC--TTSCEEEEEEEEEESCTTSSEEEEECCSSHHHHHHHHHCEEEEEECCC
T ss_pred EEEEEEcC--CCCCEEeccEEEEEcCCCCEEEEEcCCCChHHHHHHHCCEEEEEECCH
Confidence 45577777 789999999888865331355655 45677799999999999988753
No 54
>3b5m_A Uncharacterized protein; structural genomics, unknown function, flavoprotein, PSI-2, structure initiative; 1.21A {Rhodopirellula baltica}
Probab=37.88 E-value=36 Score=29.25 Aligned_cols=55 Identities=15% Similarity=0.099 Sum_probs=36.9
Q ss_pred eEEEEeecCCCCCcceEEEeeEEE------cCCCcEEEEecCCchHHHhhhhCCceEEEEeeC
Q 020331 101 RGMLSTFSQKYEGYPSGSMVDFAC------DADGTPILAVSSLAVHTKDLLANPKCSLLVARD 157 (327)
Q Consensus 101 ~~~LATv~~~~dG~P~~S~v~y~~------d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~ 157 (327)
-.+++|.+ .+|.+...++.+.. ..+..+.+.+...+.-.+||.+.+.+.+-|..+
T Consensus 6 E~vVTT~~--~~G~~N~AP~g~~~~~~~Svs~~P~v~v~i~~~s~T~~Ni~~~g~fvVNi~~~ 66 (205)
T 3b5m_A 6 ESLVTTLD--EQGRINLAPLGPIVLPPQSPGGLPQFLLRPYEGSTTCDNLLASGNAVIHVIDD 66 (205)
T ss_dssp BEEEEEEC--TTCCEEEEEECCEEECCSSTTCCCEEEECCCTTSHHHHHHHHHCEEEEEECCC
T ss_pred EEEEEEcC--CCCCEeecceEEEEeccccccCCCcEEEEECCCCchHHHHHHCCEEEEEECCH
Confidence 35688887 68887777766552 123333333334567799999999999988754
No 55
>2nr4_A Conserved hypothetical protein; structural genomics, unknown function, flavoprotein, PSI-2, protein structure initiative; HET: FMN; 1.85A {Methanosarcina mazei} SCOP: b.45.1.4
Probab=32.75 E-value=76 Score=27.37 Aligned_cols=54 Identities=11% Similarity=0.204 Sum_probs=42.4
Q ss_pred CeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEeeC
Q 020331 100 VRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARD 157 (327)
Q Consensus 100 ~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~ 157 (327)
-..+|.|.+ .+ .+..+|+.....+ +.+++.+-..+...+||++++.+.+-|.++
T Consensus 30 i~~vI~Tt~--~~-~~N~APiG~~~~~-~~v~i~~~~~s~T~eNI~~~~~fvvNv~~D 83 (213)
T 2nr4_A 30 ISEIIASTG--FE-HPNAAPIGIVMKG-ERPFVRLFKGSHTWENVLKEKCLASNVVYD 83 (213)
T ss_dssp EEEEEEEEC--SS-SCEEEEEEEEESS-SSCEEEEETTSHHHHHHHHHCEEEEECCCC
T ss_pred ceEEEEEec--CC-CccccceEEEEeC-CEEEEEECCCCchHHHHhhCCEEEEEeCCC
Confidence 346677776 56 8888888777753 467777777888999999999999988754
No 56
>1eje_A FMN-binding protein; structural genomics, PSI, protein struc initiative; HET: FMN; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.2
Probab=31.05 E-value=52 Score=27.61 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=44.7
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEE--cCC-CcEEEEecCCchHHHhhhhCCceEEEEeeCC
Q 020331 90 EEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFAC--DAD-GTPILAVSSLAVHTKDLLANPKCSLLVARDP 158 (327)
Q Consensus 90 e~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~--d~~-G~~~~~vs~~s~htrNL~~dprvSL~V~~~~ 158 (327)
+..+.+|.....++++|.+ .+|.|.+.++.+.. ..+ -.+.+.+...+.-.+||.+..+.++.|...+
T Consensus 18 ~~~~~~l~p~~V~vVTt~~--~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~T~~~i~~~~~F~Vnvl~~~ 87 (192)
T 1eje_A 18 ESAHRILTPRPTVMVTTVD--EEGNINAAPFSFTMPVSIDPPVVAFASAPDHHTARNIESTHEFVINITPAD 87 (192)
T ss_dssp GGGGGTSCCEECEEEEEEC--TTCCEEEEEECSEEEEETTTTEEEEEECTTSHHHHHHHHHCEEEEEECBGG
T ss_pred HHheeeccCcceEEEEEEC--CCCCeEEEEhhccchhcCCCCEEEEEECCchHHHHHHHHCCcEEEEeCCHH
Confidence 3456667755567777775 57888777666442 111 2355555667777899999999998886654
No 57
>3fge_A Putative flavin reductase with split barrel domai; YP_750721.1; 1.74A {Shewanella frigidimarina ncimb 400}
Probab=30.47 E-value=98 Score=26.16 Aligned_cols=65 Identities=9% Similarity=0.168 Sum_probs=40.7
Q ss_pred HHHHHHhc----CCeEEEEeecCCCCCcceEEEeeEEE--cCCCcEEEEe--cC---CchHHHhhhhCCceEEEEeeCC
Q 020331 91 EIRTVLDR----SVRGMLSTFSQKYEGYPSGSMVDFAC--DADGTPILAV--SS---LAVHTKDLLANPKCSLLVARDP 158 (327)
Q Consensus 91 ~ar~lL~~----~~~~~LATv~~~~dG~P~~S~v~y~~--d~~G~~~~~v--s~---~s~htrNL~~dprvSL~V~~~~ 158 (327)
+...||.+ ...++++|.+ .+|.|.+.++.+.. ..+ -+.+++ .. .+.-.+||.+..+.++.|...+
T Consensus 16 ~~y~ll~~~~~P~pV~vVtt~~--~~G~~n~~t~s~~~~vs~~-PPlv~v~i~~~~~~~~T~~~i~~~g~F~Vnvl~~~ 91 (203)
T 3fge_A 16 TRAHFINSLSGFKSANLIGTQD--RQGNTNLSIVSSVIHLGAN-PPLMGMIIRPHSVPRHTFENIMQTGLYTINHVNQS 91 (203)
T ss_dssp HHHHHHHHTTCCEECEEEEEEC--TTCCEEEEEESCCEEEEET-TEEEEEEECC---CHHHHHHHHHHCEEEEEECBTT
T ss_pred HHHHHHhcccCccccEEEEEeC--CCCceeEEEeeeeehhcCC-CCEEEEEeCCCCCccHHHHHHHHCCcEEEEECCHH
Confidence 45566654 4577888876 67888776655321 111 134333 33 4455788999999998886654
No 58
>3bpk_A Nitrilotriacetate monooxygenase component B; structural genomics, APC25244, PSI-2, protein structure initiative; 1.56A {Bacillus cereus atcc 14579}
Probab=30.07 E-value=1.7e+02 Score=24.53 Aligned_cols=71 Identities=6% Similarity=0.105 Sum_probs=44.0
Q ss_pred CCcHHHHHHHHhc---CCeEEEEeecCCCCCcceEEEeeEEE---cCCCcEEEEecCC----chHHHhhhhCCceEEEEe
Q 020331 86 LPPLEEIRTVLDR---SVRGMLSTFSQKYEGYPSGSMVDFAC---DADGTPILAVSSL----AVHTKDLLANPKCSLLVA 155 (327)
Q Consensus 86 ps~ae~ar~lL~~---~~~~~LATv~~~~dG~P~~S~v~y~~---d~~G~~~~~vs~~----s~htrNL~~dprvSL~V~ 155 (327)
+++.+..|.++.. ...++++|.+ .+|.|.+.++.+.. .+--.+.+.+... +.-.+||.+..+.++.|.
T Consensus 12 ~~~~~~~r~~~~~~~p~pV~vVtt~~--~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~~~~~T~~~i~~~~~F~Vnil 89 (206)
T 3bpk_A 12 QTEKDNYKLLTGSIIPRPVAFVTSVT--KEGVLNGAPYSYFNIVAANPPLISVSVQRKAGERKDTSRNAIEKGEFVVHIS 89 (206)
T ss_dssp SCHHHHHHHHHHHSCCEECEEEEEEC--TTCCEEEEEESSEEEEETTTTEEEEEEECBTTBCCHHHHHHHHHSEEEEEEC
T ss_pred CChhHhhHHhhCcccCcccEEEEEeC--CCCCEEEEEeeeeecccCCCCEEEEEEcCCCCChhHHHHHHHHCCeEEEEeC
Confidence 3445556666644 3456777775 57888777764332 2112244444444 566899999999998887
Q ss_pred eCC
Q 020331 156 RDP 158 (327)
Q Consensus 156 ~~~ 158 (327)
..+
T Consensus 90 ~~~ 92 (206)
T 3bpk_A 90 DES 92 (206)
T ss_dssp BTT
T ss_pred CHH
Confidence 655
No 59
>1yoa_A Putative flavoprotein; HB8, FAD, structural genomics, riken structura genomics/proteomics initiative, RSGI, unknown function; HET: FAD FMN; 1.90A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1wgb_A*
Probab=27.75 E-value=1.8e+02 Score=23.22 Aligned_cols=66 Identities=11% Similarity=-0.005 Sum_probs=43.7
Q ss_pred HHHHHHHhcCC--eEEEEeecCCCCCcceEEEeeEEE---cCCCcEEEEecCCchHHHhhhhCCceEEEEeeCC
Q 020331 90 EEIRTVLDRSV--RGMLSTFSQKYEGYPSGSMVDFAC---DADGTPILAVSSLAVHTKDLLANPKCSLLVARDP 158 (327)
Q Consensus 90 e~ar~lL~~~~--~~~LATv~~~~dG~P~~S~v~y~~---d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~ 158 (327)
+..|..+..-. .++++|.. +|.|.+.++.... .+--.+.+.+...+.-.+||++..+.++.|...+
T Consensus 4 ~~~r~a~~~~~~~V~vVtt~~---~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~ 74 (159)
T 1yoa_A 4 EAKKKVLRSFTYGLYVLTAKD---GDEVAAGTVNWVTQASFQPPLVAVGLKRDSHLHALVERTGKLALMTLAHD 74 (159)
T ss_dssp HHHHHHHTTCCCBCEEEEEEE---TTEEEEEEECCEEEEETTTTEEEEEEESSSHHHHHHHHHCEEEEEECBTT
T ss_pred HHHHHHHHcCCCccEEEEEcc---CCEEEEEEEeeeeeeEcCCCEEEEEECCCCchHHHHHhCCeEEEEECchh
Confidence 35666666544 45666653 6888777666542 2223455566667777899999999999887664
No 60
>3hmz_A Flavin reductase domain protein, FMN-binding; FMN-binding domain of flavin reductases-like enzyme, structu genomics; HET: MSE FMN; 1.50A {Shewanella baltica}
Probab=23.78 E-value=47 Score=28.20 Aligned_cols=64 Identities=8% Similarity=0.094 Sum_probs=41.6
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEE----cCCCcEEEEecCCchHHHhhhhCCceEEEEeeC
Q 020331 90 EEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFAC----DADGTPILAVSSLAVHTKDLLANPKCSLLVARD 157 (327)
Q Consensus 90 e~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~----d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~ 157 (327)
+++..+|.....++++|. .+|.|.+.++.+.. ++ -.+.+.+...+.-.+||.+..+.++.|...
T Consensus 20 ~~~~~~l~p~pV~vVTt~---~~g~~ng~t~s~~~~vs~~P-P~v~v~i~~~~~t~~~i~~~g~F~Vnvl~~ 87 (199)
T 3hmz_A 20 AKAYRLLNHGPTVLVSAR---SQGIDNVMAAAWCCALDFAP-PKLTVVLDKMTKTREFIEQSGMFVIQVPTV 87 (199)
T ss_dssp GGGGGGTTTCCCEEEEEE---ETTEEEEEEESCEEEEEETT-EEEEEECCTTCHHHHHHHHHSEEEEEECBG
T ss_pred HHhccccCCCCEEEEEeC---CCCcceEEEeeeeceecCCC-CEEEEEECCcchHHHHHHHCCEEEEEECCH
Confidence 345666766677888884 47888776655432 22 123344445566688999999988887654
No 61
>2d9r_A Conserved hypothetical protein; MCSG, structural genomics, hypothe protein, PSI, protein structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: b.129.2.1
Probab=22.75 E-value=2.6e+02 Score=21.34 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=42.5
Q ss_pred HHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEEcCCCcEEEEecCCchHHHhhhhCCceEEEEe
Q 020331 91 EIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKCSLLVA 155 (327)
Q Consensus 91 ~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~d~~G~~~~~vs~~s~htrNL~~dprvSL~V~ 155 (327)
++++.+...+.-|-+|+ +|.||-+. ...+.+|..+|-++..-++...+.....|.+.+.
T Consensus 44 ~i~e~~G~G~v~V~~tI----~g~~~~ts--L~p~g~G~~~Lpvk~~vRka~g~~~GD~V~V~L~ 102 (104)
T 2d9r_A 44 DVKTVYGKGRVRVNATF----DGYPYTGY--IVRMGLPCHILGLRQDIRRAIGKQPGDSVYVTLL 102 (104)
T ss_dssp CHHHHHCSSCEEEEEEE----TTEEEEEE--EEESSTTCEEEEECHHHHHHHTCCTTSEEEEEEE
T ss_pred HHHHhcCCCceEEEEEE----CCEEEEEE--EEECCCCcEEEEecHHHHHHcCCCCCCEEEEEEE
Confidence 35556666677788898 49998873 4445568888888877777777777777777664
No 62
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=20.10 E-value=2.6e+02 Score=23.13 Aligned_cols=70 Identities=17% Similarity=0.106 Sum_probs=44.1
Q ss_pred CcHHHHHHHHhcCCeEEEEeecCCCCCcceEEEeeEEE---cCCCcEEEEecCCchHHHhhhhCCceEEEEeeCC
Q 020331 87 PPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFAC---DADGTPILAVSSLAVHTKDLLANPKCSLLVARDP 158 (327)
Q Consensus 87 s~ae~ar~lL~~~~~~~LATv~~~~dG~P~~S~v~y~~---d~~G~~~~~vs~~s~htrNL~~dprvSL~V~~~~ 158 (327)
...+..|..+..-.++++-|.. .+|.|.+..+.+.. .+--.+.+.+...+.-..||.+..+.++.|...+
T Consensus 18 ~~~~~fr~a~~~~~~gVvVTt~--~~g~~~g~t~ss~~svS~~PPlv~v~i~~~~~T~~~i~~~g~F~Vnvl~~~ 90 (185)
T 4hx6_A 18 KDRVQLRRVFGDFPTGVTVVTV--GGSEPRGMTANSFTSVSLSPPLVLICVGKDAVMHQRLTALPTFAVSVLEAG 90 (185)
T ss_dssp TCHHHHHHHHTTSCBCCEEEEE--CSSSCEEEEESCCEEEETTTTEEEEEEETTSHHHHHHHHSCEEEEEECBTT
T ss_pred CCHHHHHHHHhhCCCcEEEEEc--CCCEEEEEEEeeEeeeECCCCEEEEEECCCcHHHHHHHHCCeEEEEECCHH
Confidence 3456678887766555433332 36777766555332 1112355556677777999999999999886654
Done!