Your job contains 1 sequence.
>020340
MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
EDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDE
EKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAMLEALQSTA
PEKEKRLEEEDEALIRSIFQKPREVVRRISDEDLDDDGDLFQFASERNEGSSNNLKKRKL
SEDVPSKPTDALTEASFSDSTSNGENPTVSKTESDTKVPRKSSSIQIQVIKKPATVSATK
VIAKSENKSEERTGLQSLCQNYDSDDE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020340
(327 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2020367 - symbol:AT1G17130 "AT1G17130" species... 1022 3.7e-103 1
TAIR|locus:2084726 - symbol:AT3G43250 "AT3G43250" species... 575 1.6e-59 2
TAIR|locus:2045447 - symbol:AT2G32050 "AT2G32050" species... 594 8.4e-58 1
ZFIN|ZDB-GENE-040426-841 - symbol:ccdc94 "coiled-coil dom... 533 1.8e-56 2
DICTYBASE|DDB_G0279481 - symbol:ccdc94 "putative RNA spli... 573 1.4e-55 1
MGI|MGI:1920136 - symbol:Ccdc94 "coiled-coil domain conta... 540 4.4e-52 1
FB|FBgn0034084 - symbol:CG8435 species:7227 "Drosophila m... 533 2.4e-51 1
POMBASE|SPAC9.13c - symbol:cwf16 "splicing factor (predic... 469 1.5e-44 1
UNIPROTKB|G4MZ75 - symbol:MGG_12308 "Cell cycle control p... 449 1.9e-42 1
WB|WBGene00018149 - symbol:F37C12.1 species:6239 "Caenorh... 433 9.6e-41 1
ASPGD|ASPL0000015659 - symbol:AN8001 species:162425 "Emer... 421 1.8e-39 1
CGD|CAL0005297 - symbol:orf19.5465 species:5476 "Candida ... 352 3.7e-32 1
SGD|S000001578 - symbol:YJU2 "Essential protein required ... 273 8.7e-24 1
FB|FBgn0034402 - symbol:CG15084 species:7227 "Drosophila ... 240 1.3e-23 2
UNIPROTKB|Q5EA37 - symbol:CCDC130 "Coiled-coil domain-con... 248 7.3e-21 1
TAIR|locus:2043102 - symbol:AT2G29430 "AT2G29430" species... 242 1.7e-20 1
MGI|MGI:1914986 - symbol:Ccdc130 "coiled-coil domain cont... 242 2.8e-20 1
RGD|1307598 - symbol:Ccdc130 "coiled-coil domain containi... 242 2.8e-20 1
UNIPROTKB|P13994 - symbol:CCDC130 "Coiled-coil domain-con... 242 3.4e-20 1
UNIPROTKB|F1SD79 - symbol:CCDC130 "Uncharacterized protei... 240 5.9e-20 1
POMBASE|SPBC18H10.10c - symbol:saf4 "splicing associated ... 208 3.3e-17 2
DICTYBASE|DDB_G0281599 - symbol:ccdc130 "coiled-coil doma... 207 7.1e-17 2
TAIR|locus:2824443 - symbol:AT1G25682 "AT1G25682" species... 206 2.6e-15 1
WB|WBGene00014250 - symbol:ZK1307.9 species:6239 "Caenorh... 163 1.5e-09 1
UNIPROTKB|Q09651 - symbol:ZK1307.9 "Coiled-coil domain-co... 163 1.5e-09 1
UNIPROTKB|F1MLB3 - symbol:CCDC130 "Coiled-coil domain-con... 150 3.7e-08 1
ASPGD|ASPL0000012035 - symbol:AN10484 species:162425 "Eme... 137 1.6e-06 1
TAIR|locus:2824453 - symbol:AT1G25988 "AT1G25988" species... 105 0.00011 2
>TAIR|locus:2020367 [details] [associations]
symbol:AT1G17130 "AT1G17130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 EMBL:AC007651 eggNOG:COG5134
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
HOGENOM:HOG000160812 UniGene:At.48200 UniGene:At.70431
IPI:IPI00846985 RefSeq:NP_001077550.1 PaxDb:A8MR03 PRIDE:A8MR03
EnsemblPlants:AT1G17130.2 GeneID:838283 KEGG:ath:AT1G17130
TAIR:At1g17130 OMA:VDFEGMI PhylomeDB:A8MR03 ProtClustDB:CLSN2681878
Genevestigator:A8MR03 Uniprot:A8MR03
Length = 338
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 221/345 (64%), Positives = 254/345 (73%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
MGERKVLNKYYPPDFDP+KL R+RRPKNQQIKVRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1 MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60
Query: 61 EDAIGE-------TYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRA 113
ED IGE TYLGIQIFRFYFKCTKCSAELT+KTDPQNSDYIVESGASRNYEPWRA
Sbjct: 61 EDVIGENFSFDVQTYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRA 120
Query: 114 EDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAML 173
EDE VD++K++RDAEEMGDAMK+LENRTLDSKREMDI+AALDEMKSMKSRHA+VSVDAML
Sbjct: 121 EDEEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAML 180
Query: 174 EALQSTAPXXXXXXXXXXXALIRSIFQKPREVVRRISXXXXXXXXXX-----FQFASERN 228
EALQ T A+I+SIF K +EV+RRI+ + +
Sbjct: 181 EALQRTGAEKVKRIEEEDEAVIKSIFGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKEK 240
Query: 229 EGSSNNL-KKRKLSEDVPSKPTDALTEASFSDSTSNGENPTVSKTESDTKVPRKSSSIQI 287
+GSS++L KKRK +E PS PTD LT +S+ ENP K ++ +K P KS + I
Sbjct: 241 KGSSSDLSKKRKATEVSPSNPTDILT-------SSSAENPKEPKKQAISKQPFKS--VHI 291
Query: 288 QVIKK-PA-TVSATKVIAKSENKSEE---RTGLQSLCQNYDSDDE 327
+VIKK P T S+T AK E K + T L SL QNY SD++
Sbjct: 292 KVIKKQPQPTSSSTPAPAKPEEKKSDGAANTSLASLFQNYGSDED 336
>TAIR|locus:2084726 [details] [associations]
symbol:AT3G43250 "AT3G43250" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=RCA] [GO:0010200
"response to chitin" evidence=RCA] [GO:0050832 "defense response to
fungus" evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL353871 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 HOGENOM:HOG000160812 IPI:IPI00540430 PIR:T49239
RefSeq:NP_189911.1 UniGene:At.53688 PRIDE:Q9LXK9 DNASU:823400
EnsemblPlants:AT3G43250.1 GeneID:823400 KEGG:ath:AT3G43250
TAIR:At3g43250 InParanoid:Q9LXK9 OMA:DVITETY PhylomeDB:Q9LXK9
ProtClustDB:CLSN2683275 Genevestigator:Q9LXK9 Uniprot:Q9LXK9
Length = 249
Score = 575 (207.5 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 113/176 (64%), Positives = 141/176 (80%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
MGERK LNKYYPPDFDP K+ RI++PKNQQ K+R MLP+ +RCNTCGNY+ +GTKFN R+
Sbjct: 1 MGERKNLNKYYPPDFDPKKIHRIKKPKNQQKKIRFMLPVRVRCNTCGNYMSEGTKFNCRQ 60
Query: 61 EDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDE 120
ED I ETYLG++I RFY KCTKC AELTIKTDP+N Y VESGAS Y ED ++E
Sbjct: 61 EDVITETYLGLKIHRFYIKCTKCLAELTIKTDPKNHSYTVESGASCLYNGH--ED--IEE 116
Query: 121 EKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAMLEAL 176
EKK++ +A+++LENRT+ SKRE++++A+LDE+KSMKSR AS+SVD MLE L
Sbjct: 117 EKKKKHE----NALESLENRTVVSKREIEVMASLDELKSMKSRRASLSVDYMLEDL 168
Score = 53 (23.7 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 309 SEERTGLQSL---CQNYDSDDE 327
S+++TGL+SL C N DSDDE
Sbjct: 229 SKKKTGLESLYHNCDN-DSDDE 249
>TAIR|locus:2045447 [details] [associations]
symbol:AT2G32050 "AT2G32050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006223
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
HOGENOM:HOG000160812 ProtClustDB:CLSN2683275 EMBL:DQ056561
IPI:IPI00518717 PIR:D84728 RefSeq:NP_180765.1 UniGene:At.66288
EnsemblPlants:AT2G32050.1 GeneID:817765 KEGG:ath:AT2G32050
TAIR:At2g32050 InParanoid:Q9SKZ4 OMA:KINCREE PhylomeDB:Q9SKZ4
ArrayExpress:Q9SKZ4 Genevestigator:Q9SKZ4 Uniprot:Q9SKZ4
Length = 254
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 119/207 (57%), Positives = 147/207 (71%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
MGERK LNKYYPP+FDP ++PRIR+PKNQQ K+R M+P+ IRCNTCGNY+ +GTK N R+
Sbjct: 1 MGERKGLNKYYPPNFDPKQIPRIRKPKNQQRKIRSMVPLRIRCNTCGNYMSEGTKINCRE 60
Query: 61 EDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDE 120
E+ IGETYLGI+I RFYFKC+KC EL +KTDP+NS Y+ ESGA+ Y D+
Sbjct: 61 ENVIGETYLGIKIHRFYFKCSKCCTELILKTDPKNSSYVAESGATCVY----------DQ 110
Query: 121 EKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAMLEALQSTA 180
++ AE+ GD M +LE RTL SKRE+D++AALDEMKSMKSR SVSVD+MLE L
Sbjct: 111 HEEEEQAEDGGDRMSSLEKRTLVSKREVDVMAALDEMKSMKSRRVSVSVDSMLEDLSKRH 170
Query: 181 PXXXXXXXXXXXALIRSI-FQKPREVV 206
ALI+S F K R +V
Sbjct: 171 KEEEEVAKEEDAALIKSTKFGKQRRIV 197
>ZFIN|ZDB-GENE-040426-841 [details] [associations]
symbol:ccdc94 "coiled-coil domain containing 94"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IMP]
ZFIN:ZDB-GENE-040426-841 GO:GO:0043524 GO:GO:0043518 eggNOG:COG5134
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 CTD:55702 HOGENOM:HOG000160812
HOVERGEN:HBG053135 OrthoDB:EOG43FGXZ OMA:VDFEGMI EMBL:BX248231
EMBL:BC171445 EMBL:BC171449 IPI:IPI00610445 RefSeq:NP_001104303.1
UniGene:Dr.82487 STRING:A8WHR3 Ensembl:ENSDART00000036813
GeneID:393117 KEGG:dre:393117 NextBio:20814189 Uniprot:A8WHR3
Length = 345
Score = 533 (192.7 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 100/176 (56%), Positives = 128/176 (72%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
M ERKVLNKYYPPDFDPSK+P+++ PK++Q VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60
Query: 61 EDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDE 120
E E YLG+ IFRFY KCT+C AE+T KTDP+N+DY +E GA+RN++ AE +E
Sbjct: 61 ETVQNELYLGLPIFRFYIKCTRCLAEITFKTDPENTDYAMEHGATRNFQ---AEKLIEEE 117
Query: 121 EKK---RRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAML 173
EKK R+ EE+ + MK LENRT DSK EM++L L E+K + R A V + ML
Sbjct: 118 EKKIQQEREDEELNNPMKVLENRTRDSKLEMEVLENLQELKELNQRQAQVDFEGML 173
Score = 66 (28.3 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 228 NEGSSNNLKKRKLSEDVPSKPTDALTEASFSDSTSNGENPTVSKTES-DTKVPR---KSS 283
+E + N K+R + + KPTD LT + + ++S G + V+K +S D V K +
Sbjct: 212 SEEEAENAKERS-KKHIADKPTDILT--TDTSTSSQGLSSAVAKKQSWDRSVGGLSVKGA 268
Query: 284 SIQIQVIKKPATVSATK 300
+ V KKPA SA+K
Sbjct: 269 LGSLVVRKKPAD-SASK 284
Score = 46 (21.3 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 229 EGSSNNLKKRKLSEDVPSKPTDALTEASFSDSTSNGENPTVSKTESDTKVPRKSSSIQIQ 288
+G+ +L RK D SKP+ A + + + G K ES SS+IQ
Sbjct: 266 KGALGSLVVRKKPADSASKPSHAAPPPA---AAAAGTQTGAVKPESSITSSSASSNIQPV 322
Query: 289 VIKKPATVSATKVIAKSENKSEE 311
+ +++ + S++ S +
Sbjct: 323 SCQNGSSLGLLGAYSDSDDSSSD 345
>DICTYBASE|DDB_G0279481 [details] [associations]
symbol:ccdc94 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0279481 GenomeReviews:CM000152_GR EMBL:AAFI02000031
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
RefSeq:XP_641652.1 STRING:Q54WR5 EnsemblProtists:DDB0233745
GeneID:8622059 KEGG:ddi:DDB_G0279481 InParanoid:Q54WR5 OMA:RYDEERE
Uniprot:Q54WR5
Length = 324
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 131/336 (38%), Positives = 193/336 (57%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
MGERKV++KYYPPDFDPSK+ +I+ + KV MLPMSIRCNTCG YI +GTKFN++K
Sbjct: 1 MGERKVISKYYPPDFDPSKVAKIKVKRPTFTKVTTMLPMSIRCNTCGEYIGRGTKFNAKK 60
Query: 61 EDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDE 120
E E YLGI+I+RF+ +C KC+AELTIKTDP+NS+Y+ ESGA+RNYEPW+ DE
Sbjct: 61 ETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGATRNYEPWKETDEE-KS 119
Query: 121 EKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAMLEALQSTA 180
+ ++ EE DAM ALENRTL+SKREM++L AL+E+KS+ SR++ + + +LE
Sbjct: 120 NRMTKEQEEEQDAMIALENRTLESKREMEMLDALEEIKSLNSRNSEIDTEQLLEYNLQKQ 179
Query: 181 PXXXXXXXXXXXALIRSIFQKPREV-VRRISXXXXXXXXXXFQFASERNEGSSNNLKKRK 239
L++SIF ++ + +I+ S N SN +K+ +
Sbjct: 180 ELEEKLQDEEDDLLVKSIFNNKNKLELNQINDNN-----------SINNNIDSNKIKRIE 228
Query: 240 LSEDVPSKPTDALTEASFSD----STSNGENPTVSKTE-SDTKVPRKSSSIQIQVIKKPA 294
+D K + + ++ + +N N ++ T S+T +++ + ++
Sbjct: 229 NDDDDGDKFNSLFSNNNKNNKNIINNNNNNNNNINTTSISNTIETTPTTNQKTSILGNKV 288
Query: 295 TVSATKV---IAKSENKSEERTGLQSLCQNYDSDDE 327
V K I K+ N SE + S Y D+E
Sbjct: 289 KVVINKQEEPIPKNNNNSEPNS-FSSFMSAYSDDEE 323
>MGI|MGI:1920136 [details] [associations]
symbol:Ccdc94 "coiled-coil domain containing 94"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1920136
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 EMBL:AK013533 EMBL:BC031400
IPI:IPI00109162 RefSeq:NP_082657.1 UniGene:Mm.22796 STRING:Q9D6J3
PhosphoSite:Q9D6J3 PRIDE:Q9D6J3 Ensembl:ENSMUST00000086869
GeneID:72886 KEGG:mmu:72886 UCSC:uc008dak.1 CTD:55702
HOGENOM:HOG000160812 HOVERGEN:HBG053135 InParanoid:Q9D6J3
OMA:RKVESWE OrthoDB:EOG43FGXZ ChiTaRS:CCDC94 NextBio:337083
Bgee:Q9D6J3 CleanEx:MM_CCDC94 Genevestigator:Q9D6J3
GermOnline:ENSMUSG00000003208 Uniprot:Q9D6J3
Length = 314
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 97/173 (56%), Positives = 127/173 (73%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
M ERKVLNKYYPPDFDPSK+P+++ PK++Q VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60
Query: 61 EDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDE 120
E E YLG+ IFRFY KCT+C AE+T KTDP+N+DY +E GA+RN++ + +E
Sbjct: 61 ETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120
Query: 121 EKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAML 173
+K R+ EE+ + MK LENRT DSK EM++L L E+K + R A V +AML
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAML 173
>FB|FBgn0034084 [details] [associations]
symbol:CG8435 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] EMBL:AE013599
GO:GO:0022008 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GeneTree:ENSGT00530000063615 EMBL:AY118949
RefSeq:NP_611092.2 UniGene:Dm.9146 IntAct:Q7JVH0 STRING:Q7JVH0
EnsemblMetazoa:FBtr0087249 GeneID:36789 KEGG:dme:Dmel_CG8435
UCSC:CG8435-RA FlyBase:FBgn0034084 InParanoid:Q7JVH0 OMA:NRRQQTV
OrthoDB:EOG4FBG8W GenomeRNAi:36789 NextBio:800389 Uniprot:Q7JVH0
Length = 333
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 125/337 (37%), Positives = 186/337 (55%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
M ERKVLNKYYPPDFDPSK+PR++ KN+Q VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1 MSERKVLNKYYPPDFDPSKIPRMKLAKNRQYTVRLMAPFNMRCKTCGEYIYKGKKFNARK 60
Query: 61 EDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWR-AEDEAVD 119
ED ETYLGI+I+RFY KCT+C E++ KTDPQN+DY +E+GA+RN+ + AE++A
Sbjct: 61 EDVENETYLGIRIYRFYIKCTRCLQEISFKTDPQNTDYEIEAGATRNFMALKLAEEQARR 120
Query: 120 EEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAMLEALQS- 178
EE++ RD EE + MK LENRT S+ E++ + +L+E++ + R +V + +L+ +
Sbjct: 121 EEQELRD-EEANNPMKLLENRTQQSRNEIETIESLEELRDLNRRQQTVDYNTLLQQYNTV 179
Query: 179 -TAPXXXXXXXXXXXALIRSI-FQKPREVVRRISXXXXXXXXXXFQFASERNEGSSNNLK 236
T I+S+ F+ E R+ + E + S
Sbjct: 180 ETERERQEREEREDEDFIKSVNFKNKPEGSSRVVAEEIIE-----EIKDEPLDTPSAPPP 234
Query: 237 KRKLSEDVPSKPTDALTEASFSDSTSNGENPTVSKTESDTKVPRKSSSI-QIQVIKKPAT 295
++ S + ++AS + S + P V T V + + + QV KPA
Sbjct: 235 AKQAKPSTISLSATSSSKASAAQSMVKRKTPLVLVKPKATAVAKPTVATGTTQVESKPAA 294
Query: 296 VSATKVIAKSENKSEER-----TGLQSLCQNYDSDDE 327
+ + V A +E K+ + GL L DS ++
Sbjct: 295 TTPSVVSAPAETKATNQPAAAPAGLSLLAAYSDSSED 331
>POMBASE|SPAC9.13c [details] [associations]
symbol:cwf16 "splicing factor (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IC] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=TAS] PomBase:SPAC9.13c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0044732 GO:GO:0005681
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
HOGENOM:HOG000160812 GO:GO:0045292 OrthoDB:EOG4R274F PIR:T39198
RefSeq:XP_001713052.1 IntAct:Q9P7C5 STRING:Q9P7C5
EnsemblFungi:SPAC9.13c.1 GeneID:3361543 KEGG:spo:SPAC9.13c
OMA:NTCHEYI NextBio:20811586 Uniprot:Q9P7C5
Length = 270
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 93/188 (49%), Positives = 125/188 (66%)
Query: 1 MGERKVLNKYYPPDFDPSKLP-----RIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTK 55
M ERKVLNKY PPD+DPS P + + P ++ VR+M P S+RC+TCG YIYKG K
Sbjct: 1 MSERKVLNKYIPPDYDPSIRPPKKKKKFQGPNGGKLTVRLMTPFSMRCHTCGEYIYKGKK 60
Query: 56 FNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPW---R 112
FN+RKE GE Y I I RFY +CT+C+AE+T TDP+++DY ESGASRNYEPW R
Sbjct: 61 FNARKEKT-GEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYEPWHEKR 119
Query: 113 AEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAM 172
++ +E +R D E D M+ LE +TLD+KR+M I ALDE++ +R + V++D
Sbjct: 120 LQEYEENELAERNDIPEE-DEMEKLEQKTLDTKRQMQISDALDELREKSARRSRVNIDDA 178
Query: 173 LEALQSTA 180
+ L+ A
Sbjct: 179 IALLKEDA 186
>UNIPROTKB|G4MZ75 [details] [associations]
symbol:MGG_12308 "Cell cycle control protein cwf16"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005816 "spindle pole body" evidence=ISS] GO:GO:0005816
GO:GO:0005681 GO:GO:0000398 EMBL:CM001232 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 RefSeq:XP_003715154.1
EnsemblFungi:MGG_12308T0 GeneID:5050909 KEGG:mgr:MGG_12308
Uniprot:G4MZ75
Length = 306
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 96/184 (52%), Positives = 121/184 (65%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRR-PKNQQIKV---RMMLPMSIRCNTCGNYIYKGTKF 56
M ERKVL KYYP DFDPS L R RR PK + KV R+M P S++C TCG YIY+G KF
Sbjct: 1 MSERKVLTKYYPADFDPSALTRRRRGPKQEGPKVQTVRLMAPFSMKCTTCGEYIYRGRKF 60
Query: 57 NSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWR--AE 114
N+RKE E YLGIQI+RFY KCT+CS E+ +TDP N DY+ E+GA RN +PW+ A
Sbjct: 61 NARKETP-EEKYLGIQIYRFYIKCTRCSGEIRFRTDPANQDYVCETGAHRNTDPWKRGAG 119
Query: 115 D----EAVDEEKKRR--DAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVS 168
D E DEE+ R EE +AM LE +T+D+KREM + ALDE+++ +R A
Sbjct: 120 DAVAPEETDEERLDRLEHEEEERNAMVELEAKTVDAKREMAVADALDEIRTRNARIARAD 179
Query: 169 VDAM 172
D +
Sbjct: 180 RDGI 183
>WB|WBGene00018149 [details] [associations]
symbol:F37C12.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0040022 "feminization of hermaphroditic
germ-line" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
GO:GO:0040022 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GeneTree:ENSGT00530000063615 HOGENOM:HOG000160812
OMA:NTCHEYI EMBL:FO081316 PIR:T28837 RefSeq:NP_498576.1
ProteinModelPortal:Q20124 STRING:Q20124 PaxDb:Q20124
EnsemblMetazoa:F37C12.1 GeneID:176010 KEGG:cel:CELE_F37C12.1
UCSC:F37C12.1 CTD:176010 WormBase:F37C12.1 InParanoid:Q20124
NextBio:890722 Uniprot:Q20124
Length = 323
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 86/182 (47%), Positives = 122/182 (67%)
Query: 3 ERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKED 62
ERKV KYYPPDFDPSK+PR + KN+Q R+M P +++CNTC YIYKG KFN ++E
Sbjct: 5 ERKVFQKYYPPDFDPSKIPRAKGQKNRQFVQRVMTPFNMQCNTCHEYIYKGKKFNMKRET 64
Query: 63 AIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEP---WRAEDEAVD 119
A GETYLG+++FRFYF+C C AE+T KTD +N DY E GA+R +E ++ + + VD
Sbjct: 65 AEGETYLGLKLFRFYFRCPNCLAEITFKTDLENCDYQNEHGATRLFEAVKLYQDQQKQVD 124
Query: 120 EEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAMLEALQST 179
E+ +AE+ D MK LE RT+ S++EM+ + L++++ +S +D + L ST
Sbjct: 125 EQ----EAEDAKDPMKMLEKRTMQSRQEMEEMGNLEDLQ--ESSRTKECIDT-IGFLSST 177
Query: 180 AP 181
P
Sbjct: 178 DP 179
>ASPGD|ASPL0000015659 [details] [associations]
symbol:AN8001 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] EMBL:AACD01000138
EMBL:BN001302 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 HOGENOM:HOG000160812 OrthoDB:EOG4R274F
RefSeq:XP_681270.1 STRING:Q5AUM9 EnsemblFungi:CADANIAT00004021
GeneID:2869066 KEGG:ani:AN8001.2 OMA:RCSGEIT Uniprot:Q5AUM9
Length = 272
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 88/179 (49%), Positives = 112/179 (62%)
Query: 1 MGERKVLNKYYPPDFDPSKLPR----IRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKF 56
M ERKVL KYYPPDFDPS + R +R + I VR+M P S++C CG YIYKG KF
Sbjct: 1 MSERKVLTKYYPPDFDPSAITRTPKHLRSSGPKVITVRLMAPFSMKCTQCGEYIYKGRKF 60
Query: 57 NSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWR---- 112
N+RKE E Y I I+RFY +CT+CS E+T TDP+N DY E GA RN+EPWR
Sbjct: 61 NARKETT-EEKYFSIPIYRFYIRCTRCSGEITFLTDPKNMDYRAEKGAKRNFEPWRDSKA 119
Query: 113 -----AEDEAVD--EEKKRRDAEEMG-DAMKALENRTLDSKREMDILAALDEMKSMKSR 163
E E +D E ++ + E++ D M LE + LDSKREM I ALDE+++ +R
Sbjct: 120 DNHEETEQEVLDRLEREENEEQEQLERDKMAELEEKMLDSKREMAIADALDEIRTRNAR 178
>CGD|CAL0005297 [details] [associations]
symbol:orf19.5465 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IEA] [GO:0000384 "first spliceosomal
transesterification activity" evidence=IEA] [GO:0000349 "generation
of catalytic spliceosome for first transesterification step"
evidence=IEA] CGD:CAL0005297 eggNOG:COG5134 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717742.1 RefSeq:XP_717836.1 STRING:Q5A7K1 GeneID:3640567
GeneID:3640690 KEGG:cal:CaO19.12920 KEGG:cal:CaO19.5465
Uniprot:Q5A7K1
Length = 232
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 73/183 (39%), Positives = 105/183 (57%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
M ERK +NK+YPPD+DPSK+PR ++ NQ IK+RMM P S+RC C YI FN+RK
Sbjct: 1 MSERKAINKWYPPDYDPSKIPRPKKNANQPIKIRMMAPYSMRCLKCDEYIGARRSFNARK 60
Query: 61 EDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYE---PWRAEDEA 117
E E YL I+I RFY C C+ +T KTDP+N+ Y E GA RNYE P ED+
Sbjct: 61 E-ITNEKYLNIKIIRFYITCPGCNNTITFKTDPKNAGYTPEEGAVRNYEKAKPTETEDDI 119
Query: 118 VDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAMLEALQ 177
+ +K + ++ ++A + + + L++ +K +H +D LEA+Q
Sbjct: 120 LARLQKEEEEDQKYHLLQAKRKKNPFWNEQTSGMENLEQR--LKEQHHHQKLDQQLEAIQ 177
Query: 178 STA 180
+ A
Sbjct: 178 ARA 180
>SGD|S000001578 [details] [associations]
symbol:YJU2 "Essential protein required for pre-mRNA
splicing" species:4932 "Saccharomyces cerevisiae" [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0071006 "U2-type catalytic step 1 spliceosome" evidence=IDA]
[GO:0000384 "first spliceosomal transesterification activity"
evidence=IDA] SGD:S000001578 EMBL:X71133 EMBL:BK006944
GO:GO:0000349 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GeneTree:ENSGT00530000063615 HOGENOM:HOG000160812
GO:GO:0071006 EMBL:X66245 EMBL:Z28095 PIR:S25355 RefSeq:NP_012828.1
ProteinModelPortal:P28320 DIP:DIP-1915N IntAct:P28320
MINT:MINT-393919 STRING:P28320 PaxDb:P28320 PeptideAtlas:P28320
EnsemblFungi:YKL095W GeneID:853767 KEGG:sce:YKL095W CYGD:YKL095w
OMA:IRLMTPF OrthoDB:EOG4R274F NextBio:974858 Genevestigator:P28320
GermOnline:YKL095W Uniprot:P28320
Length = 278
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 60/178 (33%), Positives = 97/178 (54%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIK--------VRMMLPMSIRCNTCGNYIYK 52
M ERK +NKYYPPD++P + ++ R +++K +R+M P S+RC C YI K
Sbjct: 1 MSERKAINKYYPPDYNPLEAEKLSRKMAKKLKTMNKSHASIRLMTPFSMRCLECNEYIPK 60
Query: 53 GTKFNSRKEDAIGETYL-GIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPW 111
KFN +KE + E YL I+I+R C +C+ + +TDP NSDY++E G RNY P
Sbjct: 61 SRKFNGKKE-LLKEKYLDSIKIYRLTISCPRCANSIAFRTDPGNSDYVMEVGGVRNYVPQ 119
Query: 112 RAEDEAVDEEKKRRDAEEMGDAMKAL-ENRTLDSKREMDILA-ALDEMKSMKSRHASV 167
+ D+ + E + + ++ L + ++ +M I A D+M ++ R A +
Sbjct: 120 KPNDDL----NAKTAVESIDETLQRLVREKEMEQNEKMGIKEQADDKMDLLEKRLAKI 173
>FB|FBgn0034402 [details] [associations]
symbol:CG15084 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:AE013599 eggNOG:COG5134 KO:K13115
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 OMA:FDDAMYK EMBL:AY070525
RefSeq:NP_611383.1 UniGene:Dm.693 PRIDE:Q7K0F0
EnsemblMetazoa:FBtr0086619 GeneID:37178 KEGG:dme:Dmel_CG15084
UCSC:CG15084-RA FlyBase:FBgn0034402 InParanoid:Q7K0F0
OrthoDB:EOG4F1VJW PhylomeDB:Q7K0F0 GenomeRNAi:37178 NextBio:802337
Bgee:Q7K0F0 Uniprot:Q7K0F0
Length = 316
Score = 240 (89.5 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 64/186 (34%), Positives = 95/186 (51%)
Query: 1 MGERKVLNKYYPPDFDPSK--LPRIR-----RPKNQQIK-----VRMMLPMSIRCNTCGN 48
MGERK NKYYPPD+DP K L + + R + ++I +R +P +I C+ C N
Sbjct: 1 MGERKGQNKYYPPDYDPKKGGLNKFQGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60
Query: 49 YIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNY 108
+I G ++N+ K +G Y +F+F KC C I+TDP N DY++ SGA R
Sbjct: 61 HIGMGVRYNAEKTK-VG-MYYTTPVFKFRMKCHLCDNHFEIQTDPGNLDYVILSGARRQE 118
Query: 109 EPWRA-EDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASV 167
W ++E V E K DAM LE++ D+K D A ++ + R+ SV
Sbjct: 119 NRWDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDAKAGAD---ARPVLQKLVERNMSV 175
Query: 168 SVDAML 173
D+ +
Sbjct: 176 WDDSYM 181
Score = 46 (21.3 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 235 LKKRKLSEDVPS----KPTDALTEASFSDSTSNG 264
++++KL E S KP + + S SD+ SNG
Sbjct: 283 IRRKKLEETTSSATNEKPISLVGDYSSSDNDSNG 316
>UNIPROTKB|Q5EA37 [details] [associations]
symbol:CCDC130 "Coiled-coil domain-containing protein 130"
species:9913 "Bos taurus" [GO:0009615 "response to virus"
evidence=IEA] GO:GO:0009615 EMBL:BT020695 EMBL:BT020732
EMBL:BT020748 EMBL:BC113236 IPI:IPI00689027 IPI:IPI00717572
RefSeq:NP_001069812.1 UniGene:Bt.65196 PRIDE:Q5EA37 GeneID:614791
KEGG:bta:614791 CTD:81576 eggNOG:COG5134 HOGENOM:HOG000239030
HOVERGEN:HBG081031 KO:K13115 NextBio:20899291 ArrayExpress:Q5EA37
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502 Uniprot:Q5EA37
Length = 400
Score = 248 (92.4 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 62/177 (35%), Positives = 95/177 (53%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRR-----PKNQQIK--------VRMMLPMSIRCNTCG 47
MGERK +NKYYPPDF+P K + R P ++ + +R +P +I C+ C
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 48 NYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRN 107
N+I G ++N+ K+ +G Y I+RF KC C + ++TDP N DY++ SGA R
Sbjct: 61 NHIGMGVRYNAEKKK-VGNYYT-TPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRK 118
Query: 108 YEPWRAED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDEMKS 159
E W ED + + E +++ EM DAM LE+ D K+ + L+ + E +S
Sbjct: 119 EERWDMEDNEQVLTTEHEKKQKLEM-DAMFRLEHGEADRSTLKKALPTLSHIQEAQS 174
>TAIR|locus:2043102 [details] [associations]
symbol:AT2G29430 "AT2G29430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004561
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
IPI:IPI00544453 PIR:C84696 RefSeq:NP_180504.1 UniGene:At.74521
UniGene:At.75070 PRIDE:Q9ZW25 EnsemblPlants:AT2G29430.1
GeneID:3768235 KEGG:ath:AT2G29430 TAIR:At2g29430
HOGENOM:HOG000154050 OMA:TNGSHEM PhylomeDB:Q9ZW25
Genevestigator:Q9ZW25 Uniprot:Q9ZW25
Length = 84
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 43/72 (59%), Positives = 56/72 (77%)
Query: 35 MMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQ 94
+ LPM ++CN C N + KGTKF SR ED IGETYLGI+IFRF +CT S E+ +TDP+
Sbjct: 8 LSLPMRLQCNNCDNIMSKGTKFTSRVEDVIGETYLGIKIFRFQIQCTNGSHEMKFRTDPK 67
Query: 95 NSDYIVESGASR 106
N+D+I+ESGA+R
Sbjct: 68 NADFIIESGATR 79
>MGI|MGI:1914986 [details] [associations]
symbol:Ccdc130 "coiled-coil domain containing 130"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1914986
GO:GO:0009615 CTD:81576 eggNOG:COG5134 HOGENOM:HOG000239030
HOVERGEN:HBG081031 KO:K13115 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GeneTree:ENSGT00530000063615 OMA:RSWFPSA
OrthoDB:EOG4T783D EMBL:AK015911 EMBL:BC021321 IPI:IPI00317200
IPI:IPI00830539 RefSeq:NP_080626.1 UniGene:Mm.30095
PhosphoSite:Q9D516 PRIDE:Q9D516 DNASU:67736
Ensembl:ENSMUST00000005120 Ensembl:ENSMUST00000098578 GeneID:67736
KEGG:mmu:67736 UCSC:uc009mml.1 UCSC:uc012ghi.1 InParanoid:Q9D516
NextBio:325421 Bgee:Q9D516 CleanEx:MM_CCDC130 Genevestigator:Q9D516
Uniprot:Q9D516
Length = 385
Score = 242 (90.2 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 61/177 (34%), Positives = 93/177 (52%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQ-------------IKVRMMLPMSIRCNTCG 47
MGERK NKYYPPDF+P K + R N + +R +P +I C+ C
Sbjct: 1 MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILVIRFEMPYNIWCDGCK 60
Query: 48 NYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRN 107
N+I G ++N+ K+ +G Y I+RF KC C + ++TDP N DY++ SGASR
Sbjct: 61 NHIGMGVRYNAEKKK-VGNYYT-TPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRK 118
Query: 108 YEPWRAED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDEMKS 159
E W ED + + E ++++ E DAM LE+ D K+ + L+ + E ++
Sbjct: 119 EERWDMEDNEQVLTTEHEKKEKLET-DAMFRLEHGEADRSTLKKALPTLSHIQEAQN 174
>RGD|1307598 [details] [associations]
symbol:Ccdc130 "coiled-coil domain containing 130" species:10116
"Rattus norvegicus" [GO:0009615 "response to virus"
evidence=IEA;ISO] RGD:1307598 GO:GO:0009615 CTD:81576
eggNOG:COG5134 HOGENOM:HOG000239030 HOVERGEN:HBG081031 KO:K13115
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 OrthoDB:EOG4T783D EMBL:BC107912
IPI:IPI00371657 RefSeq:NP_001032733.1 UniGene:Rn.7862 PRIDE:Q32PZ9
Ensembl:ENSRNOT00000011150 GeneID:304656 KEGG:rno:304656
InParanoid:Q32PZ9 NextBio:653432 ArrayExpress:Q32PZ9
Genevestigator:Q32PZ9 Uniprot:Q32PZ9
Length = 385
Score = 242 (90.2 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 61/177 (34%), Positives = 95/177 (53%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRR-----PKNQQIK--------VRMMLPMSIRCNTCG 47
MGERK NKYYPPDF+P K + R P ++ + +R +P +I C+ C
Sbjct: 1 MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 48 NYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRN 107
N+I G ++N+ K+ +G Y I+RF KC C + ++TDP N DY++ SGASR
Sbjct: 61 NHIGMGVRYNAEKKK-VGNYYT-TPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRK 118
Query: 108 YEPWRAED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDEMKS 159
E W ED + + E ++++ E DAM LE+ D K+ + L+ + E ++
Sbjct: 119 EERWDMEDNEQVLTTEHEKKEKLET-DAMFRLEHGEADRSTLKKALPTLSHIQEAQN 174
>UNIPROTKB|P13994 [details] [associations]
symbol:CCDC130 "Coiled-coil domain-containing protein 130"
species:9606 "Homo sapiens" [GO:0009615 "response to virus"
evidence=IEP] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0009615 CTD:81576
eggNOG:COG5134 HOGENOM:HOG000239030 HOVERGEN:HBG081031 KO:K13115
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502 EMBL:AF250306
EMBL:BC002905 EMBL:X13956 IPI:IPI00011306 PIR:S02660
RefSeq:NP_110445.1 UniGene:Hs.24998 ProteinModelPortal:P13994
IntAct:P13994 MINT:MINT-1389809 STRING:P13994 DMDM:134037158
PRIDE:P13994 DNASU:81576 Ensembl:ENST00000221554 GeneID:81576
KEGG:hsa:81576 UCSC:uc002mxc.1 GeneCards:GC19P013860
HGNC:HGNC:28118 neXtProt:NX_P13994 PharmGKB:PA162381331
InParanoid:P13994 OMA:RSWFPSA OrthoDB:EOG4T783D PhylomeDB:P13994
GenomeRNAi:81576 NextBio:71888 ArrayExpress:P13994 Bgee:P13994
CleanEx:HS_CCDC130 Genevestigator:P13994 GermOnline:ENSG00000104957
Uniprot:P13994
Length = 396
Score = 242 (90.2 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 63/178 (35%), Positives = 96/178 (53%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRR-----PKNQQIK--------VRMMLPMSIRCNTCG 47
MGERK +NKYYPPDF+P K + R P ++ + +R +P +I C+ C
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 48 NYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRN 107
N+I G ++N+ K+ +G Y I+RF KC C + ++TDP N DY++ SGA R
Sbjct: 61 NHIGMGVRYNAEKKK-VGNYYT-TPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRK 118
Query: 108 YEPW-RAEDEAV--DEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDEMKS 159
E W A++E V E +K++ E DAM LE+ D K+ + L+ + E +S
Sbjct: 119 EERWDMADNEQVLTTEHEKKQKLET--DAMFRLEHGEADRSTLKKALPTLSHIQEAQS 174
>UNIPROTKB|F1SD79 [details] [associations]
symbol:CCDC130 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009615 "response to virus" evidence=IEA] GO:GO:0009615
KO:K13115 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
GeneTree:ENSGT00530000063615 OMA:RSWFPSA EMBL:CU855962
RefSeq:XP_003123393.1 UniGene:Ssc.4489 Ensembl:ENSSSCT00000015029
GeneID:100525683 KEGG:ssc:100525683 Uniprot:F1SD79
Length = 398
Score = 240 (89.5 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 62/178 (34%), Positives = 96/178 (53%)
Query: 1 MGERKVLNKYYPPDFDPSKLPRIRR-----PKNQQIK--------VRMMLPMSIRCNTCG 47
MGERK +NKYYPPDF+P K + R P ++ + +R +P +I C+ C
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 48 NYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRN 107
N+I G ++N+ K+ +G Y I+RF KC C + ++TDP N DY++ SGA R
Sbjct: 61 NHIGMGVRYNAEKKK-VGNYYT-TPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRK 118
Query: 108 YEPW-RAEDEAV--DEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDEMKS 159
E W A++E V E +K++ E DAM LE+ D K+ + L+ + E ++
Sbjct: 119 EERWDMADNEQVLTTEHEKKQKLET--DAMYRLEHGEADRSTLKKALPTLSHIQEAQN 174
>POMBASE|SPBC18H10.10c [details] [associations]
symbol:saf4 "splicing associated factor Saf4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IC]
PomBase:SPBC18H10.10c EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005681 eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 GO:GO:0045292 PIR:T39774 RefSeq:NP_595734.2
IntAct:O60141 GeneID:2540801 OrthoDB:EOG4MKRR4 NextBio:20801919
Uniprot:O60141
Length = 299
Score = 208 (78.3 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 49/141 (34%), Positives = 76/141 (53%)
Query: 7 LNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGE 66
+ KY PP+ P+ + + +N +R +P + CN C N I +GT+FN+ K++ IG
Sbjct: 6 MGKYIPPE-GPNAKRKFDKLRNV---IRFEMPFPVWCNNCENIIQQGTRFNAVKKE-IG- 59
Query: 67 TYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDEEKKRRD 126
+Y +I+ F KC CS + + TDP+N++YIV SG R EP +D K D
Sbjct: 60 SYYTTKIWSFSLKCHLCSNPIDVHTDPKNTEYIVASGGRRKIEP---QDINERPAKAEND 116
Query: 127 AEEMGDAMKALENRTLDSKRE 147
+ DA++ALE + K E
Sbjct: 117 EKVPSDAIEALETQLTQQKSE 137
Score = 37 (18.1 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 225 SERNEGSSNNLKKRKLSED 243
SE+ + + NLK K+ ED
Sbjct: 266 SEQRKFPTENLKGEKILED 284
>DICTYBASE|DDB_G0281599 [details] [associations]
symbol:ccdc130 "coiled-coil domain-containing protein
130" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0281599 EMBL:AAFI02000042 eggNOG:COG5134 KO:K13115
InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
RefSeq:XP_640527.1 EnsemblProtists:DDB0305013 GeneID:8623137
KEGG:ddi:DDB_G0281599 OMA:RTINDYQ ProtClustDB:CLSZ2497202
Uniprot:Q54TR4
Length = 325
Score = 207 (77.9 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 57/188 (30%), Positives = 91/188 (48%)
Query: 1 MGERKVLNKYYPPDFDPSK--LPRIR-----RPKNQQIK-----VRMMLPMSIRCNTCGN 48
M ERK NKYYPPD+DPSK + + R R + ++I +R +P S+ C C
Sbjct: 1 MAERKATNKYYPPDWDPSKGSINQYRGQHHLRDRARKIDQGILIIRFEMPFSVWCLGCEC 60
Query: 49 YIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNY 108
+I G +FN+ K+ + Y I+ F KC +CS + I+ DP+N+DY + SG +
Sbjct: 61 HIGMGVRFNAEKKTV--DKYFTSNIYSFKMKCHQCSNQFEIQNDPKNTDYKLISGLKKRI 118
Query: 109 EPWRAEDEAV-----------DEEKKRRDAEEMGDAMKALENRTLD---SKREMDILAAL 154
E + ED + + + + D + LEN+ LD K+E L L
Sbjct: 119 EQFNPEDSELPSSFIIKYDDNNNNNNNNNNNDNNDTLLKLENKKLDIEKGKKESTQLEKL 178
Query: 155 DEMKSMKS 162
E+ + ++
Sbjct: 179 QEIMTNRT 186
Score = 43 (20.2 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 231 SSNNLKKRKLSEDVPSKPTDALTEASFSDSTSN-GENPTVSKTESDTK------VPRKSS 283
+SN+LK RKL E K + + S ST+N N V+ ++ + RK S
Sbjct: 240 NSNSLK-RKLDESNKLK-RELIKNESILKSTNNVNNNNNVNNNNNNNNNNKIEAIIRKKS 297
Query: 284 SIQIQVIKKPATVSATKV 301
I + + +KV
Sbjct: 298 KIDPSLFNNNVNKNKSKV 315
>TAIR|locus:2824443 [details] [associations]
symbol:AT1G25682 "AT1G25682" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC084221
eggNOG:COG5134 HOGENOM:HOG000239030 KO:K13115 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 OMA:RSWFPSA EMBL:BT011673
EMBL:AK221692 IPI:IPI00532188 PIR:D86386 RefSeq:NP_173930.1
UniGene:At.27526 EnsemblPlants:AT1G25682.1 GeneID:839146
KEGG:ath:AT1G25682 TAIR:At1g25682 InParanoid:Q9C609
PhylomeDB:Q9C609 ProtClustDB:CLSN2682627 Genevestigator:Q9C609
Uniprot:Q9C609
Length = 310
Score = 206 (77.6 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 53/182 (29%), Positives = 93/182 (51%)
Query: 8 NKYYPPDFDPSK--LPRIR--RPKNQQIK--------VRMMLPMSIRCNTCGNYIYKGTK 55
N YYPP++ P + L + + P ++ K +R +P +I C C + I KG +
Sbjct: 11 NFYYPPEWTPDQGSLNKFQGQHPLRERAKKIGEGILVIRFEMPYNIWCGGCSSMIAKGVR 70
Query: 56 FNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAED 115
FN+ K+ +G Y +I+ F K C E+ I+TDPQN +Y++ SGA + E + AED
Sbjct: 71 FNAEKKQ-VGN-YYSTKIWSFAMKSPCCKHEIVIQTDPQNCEYVITSGAQKKVEEYEAED 128
Query: 116 EAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMK-SRHAS-VSVDAML 173
E ++ ++ D LE++ +D +++ L ++ + +RHA S++ L
Sbjct: 129 AETMELTAEQEKGKLADPFYRLEHQEVDLQKKKAAEPLLVRLQRVSDARHADDYSLNKAL 188
Query: 174 EA 175
A
Sbjct: 189 RA 190
>WB|WBGene00014250 [details] [associations]
symbol:ZK1307.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 eggNOG:COG5134 HOGENOM:HOG000239030
KO:K13115 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
EMBL:Z47358 PIR:T27732 RefSeq:NP_496077.1 ProteinModelPortal:Q09651
DIP:DIP-24831N IntAct:Q09651 MINT:MINT-1091593 STRING:Q09651
PaxDb:Q09651 EnsemblMetazoa:ZK1307.9 GeneID:174518
KEGG:cel:CELE_ZK1307.9 UCSC:ZK1307.9 CTD:174518 WormBase:ZK1307.9
GeneTree:ENSGT00530000063615 InParanoid:Q09651 OMA:FDDAMYK
NextBio:884368 Uniprot:Q09651
Length = 369
Score = 163 (62.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 55/180 (30%), Positives = 84/180 (46%)
Query: 1 MGERKVLNKYYPPDFD-----------PSKLPRIRRPKNQQ--IKVRMMLPMSIRCNTCG 47
MGERK N YYPPDF+ + R R K Q + +R +P +I C C
Sbjct: 1 MGERKGQNFYYPPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCH 60
Query: 48 NYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRN 107
N++ G ++N+ K+ IG Y + F KC C I+TDP+N DY + G SR
Sbjct: 61 NHVGMGVRYNAEKKK-IG-MYYTTPLHEFRMKCHLCDNYYVIRTDPKNFDYELVEGCSRQ 118
Query: 108 ---YEPWR-AEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSR 163
++P A+ AVD ++ A DAM E+ D + +D+++ ++ R
Sbjct: 119 ELRFDPTDIAQIGAVDRGFTQKLA---ADAMFKKEHEAEDKDKAATEEGRVDKLEWIQER 175
>UNIPROTKB|Q09651 [details] [associations]
symbol:ZK1307.9 "Coiled-coil domain-containing protein 130
homolog" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] GO:GO:0009792 eggNOG:COG5134
HOGENOM:HOG000239030 KO:K13115 InterPro:IPR007590 PANTHER:PTHR12111
Pfam:PF04502 EMBL:Z47358 PIR:T27732 RefSeq:NP_496077.1
ProteinModelPortal:Q09651 DIP:DIP-24831N IntAct:Q09651
MINT:MINT-1091593 STRING:Q09651 PaxDb:Q09651
EnsemblMetazoa:ZK1307.9 GeneID:174518 KEGG:cel:CELE_ZK1307.9
UCSC:ZK1307.9 CTD:174518 WormBase:ZK1307.9
GeneTree:ENSGT00530000063615 InParanoid:Q09651 OMA:FDDAMYK
NextBio:884368 Uniprot:Q09651
Length = 369
Score = 163 (62.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 55/180 (30%), Positives = 84/180 (46%)
Query: 1 MGERKVLNKYYPPDFD-----------PSKLPRIRRPKNQQ--IKVRMMLPMSIRCNTCG 47
MGERK N YYPPDF+ + R R K Q + +R +P +I C C
Sbjct: 1 MGERKGQNFYYPPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCH 60
Query: 48 NYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRN 107
N++ G ++N+ K+ IG Y + F KC C I+TDP+N DY + G SR
Sbjct: 61 NHVGMGVRYNAEKKK-IG-MYYTTPLHEFRMKCHLCDNYYVIRTDPKNFDYELVEGCSRQ 118
Query: 108 ---YEPWR-AEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSR 163
++P A+ AVD ++ A DAM E+ D + +D+++ ++ R
Sbjct: 119 ELRFDPTDIAQIGAVDRGFTQKLA---ADAMFKKEHEAEDKDKAATEEGRVDKLEWIQER 175
>UNIPROTKB|F1MLB3 [details] [associations]
symbol:CCDC130 "Coiled-coil domain-containing protein 130"
species:9913 "Bos taurus" [GO:0009615 "response to virus"
evidence=IEA] GO:GO:0009615 IPI:IPI00717572 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 GeneTree:ENSGT00530000063615
EMBL:DAAA02019358 Ensembl:ENSBTAT00000003269 OMA:RTEITHR
ArrayExpress:F1MLB3 Uniprot:F1MLB3
Length = 334
Score = 150 (57.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 38/112 (33%), Positives = 60/112 (53%)
Query: 53 GTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWR 112
G ++N+ K+ +G Y I+RF KC C + ++TDP N DY++ SGA R E W
Sbjct: 1 GVRYNAEKK--VGNYYT-TPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEERWD 57
Query: 113 AED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDEMKS 159
ED + + E +++ EM DAM LE+ D K+ + L+ + E +S
Sbjct: 58 MEDNEQVLTTEHEKKQKLEM-DAMFRLEHGEADRSTLKKALPTLSHIQEAQS 108
>ASPGD|ASPL0000012035 [details] [associations]
symbol:AN10484 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] EMBL:BN001302 InterPro:IPR007590
PANTHER:PTHR12111 Pfam:PF04502 EnsemblFungi:CADANIAT00004794
HOGENOM:HOG000216114 OMA:RANKISQ Uniprot:C8V6A1
Length = 383
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/114 (32%), Positives = 58/114 (50%)
Query: 7 LNKYYPPDFD----PSKL----PRIRRPKNQQIK----VRMMLPMSIRCNTCG--NYIYK 52
+ +Y PPD + +KL P R ++ Q K VR +P ++ C TC N I +
Sbjct: 6 MGRYIPPDQEGLTTANKLHNKHPLGSRARHLQSKGALIVRFEMPFAVWCTTCSPENIIGQ 65
Query: 53 GTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASR 106
G +FN+ K+ +G Y ++ F K T C + I+TDP+N+ Y+V G R
Sbjct: 66 GVRFNAEKKK-VGN-YYSTPVYSFRMKHTLCGGWIEIRTDPKNTAYVVTEGGRR 117
>TAIR|locus:2824453 [details] [associations]
symbol:AT1G25988 "AT1G25988" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC084221
eggNOG:COG5134 InterPro:IPR007590 PANTHER:PTHR12111 Pfam:PF04502
IPI:IPI00540403 PIR:G86386 RefSeq:NP_173933.1 UniGene:At.51767
PaxDb:Q9C606 PRIDE:Q9C606 EnsemblPlants:AT1G25988.1 GeneID:839149
KEGG:ath:AT1G25988 TAIR:At1g25988 PhylomeDB:Q9C606
Genevestigator:Q9C606 Uniprot:Q9C606
Length = 180
Score = 105 (42.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 90 KTDPQNSDYIVESGASRNYEPWRAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMD 149
KTDPQN +Y++ SGA + E + AED E ++ ++ D LE++ +D +++
Sbjct: 27 KTDPQNCEYVITSGAQKKVEEYEAEDAETMELTAEQEKGKLADPFYRLEHQEVDLQKKKA 86
Query: 150 ILAALDEMKSMK-SRHA 165
L ++ + +RHA
Sbjct: 87 AEPFLVRLQRVSDARHA 103
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 8 NKYYPPDFDPSKLPRIRR 25
N YPPD+ P++ RR
Sbjct: 4 NFNYPPDWTPNQSKENRR 21
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.126 0.345 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 327 306 0.00099 115 3 11 23 0.47 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 595 (63 KB)
Total size of DFA: 188 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.34u 0.13s 33.47t Elapsed: 00:00:02
Total cpu time: 33.35u 0.13s 33.48t Elapsed: 00:00:02
Start: Sat May 11 14:36:47 2013 End: Sat May 11 14:36:49 2013