BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020355
(327 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 115/237 (48%), Gaps = 43/237 (18%)
Query: 89 RCAHFAIFDGHGGRLAAEYAQKRLHA---NVISAGLPPAKKAILDGFRKTDESLLQESV- 144
+C+ FA++DGHGG A+Y L V + G +KA+ + F D +LLQE V
Sbjct: 50 QCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVI 109
Query: 145 ------SG---------GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHL 189
SG G G TAV + G+ ++VAN GD++ VV R+
Sbjct: 110 EELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG--------- 160
Query: 190 DELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK----- 244
KA+ ++ HK E RI+K+GG V+ +GR+ G L +SRA GD +K
Sbjct: 161 ------KALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSL 214
Query: 245 ---KFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQ-KLLKEGLSVT 297
+ + A PDI V D F++L CDG+W V+FVQ ++ K G+ ++
Sbjct: 215 PAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLS 271
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------SAGLPPA---KKAILDGFRKTDESL--L 140
FA++DGH G A+Y + L ++ SAG P K I GF + DE + +
Sbjct: 56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVM 115
Query: 141 QESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVV 200
E G + G+TAV + I + + N GD++ ++ R+ K
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFF 160
Query: 201 TRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATP 252
T+ HK P E+ RIQ +GG+V R+ G L VSRA GD +K V P
Sbjct: 161 TQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEP 219
Query: 253 DIHSFEVTERD-HFIILGCDGLWGVFGPSDAVEFVQKLLK 291
++H E +E D FIIL CDG+W V G + +FV+ L+
Sbjct: 220 EVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLE 259
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------SAGLPPA---KKAILDGFRKTDESL--L 140
FA++DGH G A+Y + L ++ SAG P K I GF + DE + +
Sbjct: 56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVM 115
Query: 141 QESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVV 200
E G + G+TAV + I + + N GD++ ++ R+ K
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFF 160
Query: 201 TRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATP 252
T+ HK P E+ RIQ +GG+V R+ G L VSRA GD +K V P
Sbjct: 161 TQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEP 219
Query: 253 DIHSFEVTERD-HFIILGCDGLWGVFGPSDAVEFVQKLLK 291
++H E +E D FIIL CDG+W V G + +FV+ L+
Sbjct: 220 EVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLE 259
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 41/224 (18%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVIS------AG---------LPPAKKAILDGFRKTDE 137
FA++DGH G A Y L ++ + AG + K I GF K DE
Sbjct: 58 FAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDE 117
Query: 138 SL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSL 195
+ + +G + G+TAV + I + ++ N GD++AV+ R+
Sbjct: 118 YMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG--------------- 162
Query: 196 KAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG-------- 247
+ T+ HK P+E+ RIQ +GG+V R+ G L VSRA GD +K
Sbjct: 163 QVCFSTQDHKPCNPREKERIQNAGGSVMIQ-RVNGSLAVSRALGDYDYKCVDGKGPTEQL 221
Query: 248 VVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLK 291
V P+++ E D FIIL DG+W V + E+V+ L+
Sbjct: 222 VSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEELCEYVKSRLE 265
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 40/214 (18%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH----------ANVISAG---LPPAKKAILDGFRKTD--- 136
F ++DGHGG A Y ++R+H ++S G L KKA+ + F + D
Sbjct: 55 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEI 114
Query: 137 ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK 196
ES+ E+V G+T+V + +FVAN GD++AV+ R
Sbjct: 115 ESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKT--------------- 153
Query: 197 AIVVTRVHKAIYPQERARIQKSGGTV-SSNG-RLQGRLEVSRAFGDRQFKKFGVVATPDI 254
A+ ++ HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P++
Sbjct: 154 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEV 212
Query: 255 HSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
+ + + D +IL DG+W V +A E +K
Sbjct: 213 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 246
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 40/214 (18%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------------SAGLPPAKKAILDGFRKTD--- 136
F ++DGHGG A Y ++R+H + L KKA+ + F + D
Sbjct: 58 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEI 117
Query: 137 ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK 196
ES+ E+V G+T+V + +FVAN GD++AV+ R
Sbjct: 118 ESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKT--------------- 156
Query: 197 AIVVTRVHKAIYPQERARIQKSGGTV-SSNG-RLQGRLEVSRAFGDRQFKKFGVVATPDI 254
A+ ++ HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P++
Sbjct: 157 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEV 215
Query: 255 HSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
+ + + D +IL DG+W V +A E +K
Sbjct: 216 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 249
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 40/214 (18%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------------SAGLPPAKKAILDGFRKTD--- 136
F ++DGHGG A Y ++R+H + L KKA+ + F + D
Sbjct: 70 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEI 129
Query: 137 ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK 196
ES+ E+V G+T+V + +FVAN GD++AV+ R
Sbjct: 130 ESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKT--------------- 168
Query: 197 AIVVTRVHKAIYPQERARIQKSGGTV-SSNG-RLQGRLEVSRAFGDRQFKKFGVVATPDI 254
A+ ++ HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P++
Sbjct: 169 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEV 227
Query: 255 HSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
+ + + D +IL DG+W V +A E +K
Sbjct: 228 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 261
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 86 PNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPPA-------------KKAILDGF 132
P+L F ++DGHGG A Y ++R+H + + KKA+ + F
Sbjct: 55 PHLSAHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSF 114
Query: 133 RKTDESLLQESVSGGWQD-GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDE 191
+ D + E+V+ + G+T+V + +FVAN GD++AV+ R
Sbjct: 115 MRVDSEI--ETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKT---------- 162
Query: 192 LSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVSRAFGDRQFKKFGVV 249
+ ++ HK E ARI+ +GG V + R+ G L +SR+ GDR K V+
Sbjct: 163 -----PLALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKP-SVI 216
Query: 250 ATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
P++ S + D +IL DGLW V + + +K
Sbjct: 217 PDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARK 255
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 61/283 (21%)
Query: 90 CAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPPAKKAILDGFR------KTDE---SLL 140
CA F +FDG G A+E + + +IS+ PA + + + R + DE LL
Sbjct: 53 CAFFGVFDGTVGDFASENVKDLVVPQLISS---PAWQEVTEXLRSDVPATEVDEKLPQLL 109
Query: 141 QESVSGGWQDG-----------------ATAVCIWILGRTVFVANIGDAKAVVARSSIVD 183
++V +++ +T+V + V V ++GD++ I
Sbjct: 110 DQAVDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSR-------IAX 162
Query: 184 GSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVS-------------------- 223
G ++ + L +T HK P E+ RI ++GG+V
Sbjct: 163 G----VETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRK 218
Query: 224 SNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAV 283
S G +L+ SRAFG + K +G+ PD+ VT + IL DGLW V + AV
Sbjct: 219 SRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAV 278
Query: 284 EFVQKLLKEGLS-VTXXXXXXXXXXXXXXXCKDNCTAIVIIFR 325
E + +EG + DN TA + F+
Sbjct: 279 EIAXQARQEGRNPAQALVEXTLAEQQSRNQSADNITAXTVFFK 321
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 59/233 (25%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---------------------------ANVISAGLPPAK 125
F ++DGHGG A+Y + RLH V ++
Sbjct: 71 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 130
Query: 126 --------KAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 177
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 131 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 184
Query: 178 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 235
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 185 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 229
Query: 236 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 230 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 281
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 92 HFAIFDGHGGRLAAEYAQKRLHANVISAGLPPAKKA---ILDGFRKTDESLLQE---SVS 145
+FA++DGHGG AA++ + ++ LP K + F + D++ S
Sbjct: 151 YFAVYDGHGGPAAADFCHTHMEKCIMDL-LPKEKNLETLLTLAFLEIDKAFSSHARLSAD 209
Query: 146 GGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 203
T + +L G + VA++GD++A++ R K + +T
Sbjct: 210 ATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMKLTID 254
Query: 204 HKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEV 259
H E+ RI+K GG V+ N + GRL ++R+ GD K GV+A P+ ++
Sbjct: 255 HTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKL 314
Query: 260 TER-DHFIILGCDGLWGVFGPSDAVEFVQK 288
D F++L DG+ + + +FV +
Sbjct: 315 HHADDSFLVLTTDGINFMVNSQEICDFVNQ 344
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 59/233 (25%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---------------------------ANVISAGLPPAK 125
F ++DGHGG A+Y + RLH V ++
Sbjct: 54 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 113
Query: 126 --------KAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 177
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 114 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 167
Query: 178 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 235
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 168 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 212
Query: 236 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 213 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 264
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 59/233 (25%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---------------------------ANVISAGLPPAK 125
F ++DGHGG A+Y + RLH V ++
Sbjct: 78 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 137
Query: 126 --------KAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 177
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 138 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 191
Query: 178 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 235
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 192 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 236
Query: 236 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 237 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 288
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 59/233 (25%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---------------------------ANVISAGLPPAK 125
F ++DGHGG A+Y + RLH V ++
Sbjct: 69 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 128
Query: 126 --------KAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 177
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 129 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 182
Query: 178 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 235
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 183 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 227
Query: 236 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 228 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 279
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 59/233 (25%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---------------------------ANVISAGLPPAK 125
F ++DGHGG A+Y + RLH V ++
Sbjct: 68 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTVD 127
Query: 126 --------KAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 177
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 128 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 181
Query: 178 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 235
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 182 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 226
Query: 236 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 227 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 278
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 92 HFAIFDGHGGRLAAEYAQKRLHANVISAGLPPAKKA---ILDGFRKTDESLLQE---SVS 145
+FA++DGHGG AA++ + ++ LP K + F + D++ S
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKCIMDL-LPKEKNLETLLTLAFLEIDKAFSSHARLSAD 95
Query: 146 GGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 203
T + +L G + VA++GD++A++ R K + +T
Sbjct: 96 ATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMKLTID 140
Query: 204 HKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEV 259
H E+ RI+K GG V+ N + GRL ++R+ GD K GV+A P+ ++
Sbjct: 141 HTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKL 200
Query: 260 TER-DHFIILGCDGLWGVFGPSDAVEFVQK 288
D F++L DG+ + + +FV +
Sbjct: 201 HHADDSFLVLTTDGINFMVNSQEICDFVNQ 230
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 59/233 (25%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---------------------------ANVISAGLPPAK 125
F ++DGHGG A+Y + RLH V ++
Sbjct: 65 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 124
Query: 126 --------KAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 177
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 125 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 178
Query: 178 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 235
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 179 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 223
Query: 236 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 288
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 224 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 275
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Query: 164 VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVS 223
V NIGD++A + S DG L ++ HK +P E +RI+K+GG+V
Sbjct: 175 VTAINIGDSRATLIHS---DGGLTRL-----------SKDHKPNHPTEASRIEKAGGSVE 220
Query: 224 S--NGRLQGRLEVSRAFGDRQFK--------KFGVVATPDIHSFEVTERDHFIILGCDGL 273
+ R+ G L +SRAFGD FK + V+A PD+ F ++L CDG+
Sbjct: 221 TFDVPRVDGVLALSRAFGDSDFKXNPNLPPEEQKVIAVPDVRQF-YALSSDLLLLACDGV 279
Query: 274 W 274
+
Sbjct: 280 Y 280
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 88/233 (37%), Gaps = 59/233 (25%)
Query: 107 YAQKRLHANVISAGLPPAKKAILDGFRKTDESLLQESVSGGWQD------------GATA 154
Y Q+ + N + K+A+++ F++ D + E+ G GATA
Sbjct: 144 YWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATA 203
Query: 155 VCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERAR 214
+ G + VAN GD++A++ +E S A+ ++ H A +E R
Sbjct: 204 CVAHVDGVDLHVANTGDSRAMLGVQ----------EEDGSWSAVTLSNDHNAQNERELQR 253
Query: 215 IQ-----KSGGTVSSNGRLQGRLEVSRAFGDRQFK-----------------------KF 246
++ +V RL G L RAFGD +FK KF
Sbjct: 254 LKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKF 313
Query: 247 ---------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLL 290
+ A P++ + +D F++L DGLW D V V + L
Sbjct: 314 IPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYL 366
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 59/215 (27%)
Query: 125 KKAILDGFRKTDESLLQESVSGGWQD------------GATAVCIWILGRTVFVANIGDA 172
K+A+++ F++ D + E+ G GATA + G + VAN GD+
Sbjct: 162 KEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDS 221
Query: 173 KAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQ-----KSGGTVSSNGR 227
+A++ +E S A+ ++ H A +E R++ +V R
Sbjct: 222 RAMLGVQ----------EEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDR 271
Query: 228 LQGRLEVSRAFGDRQFK-----------------------KF---------GVVATPDIH 255
L G L RAFGD +FK KF + A P++
Sbjct: 272 LLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVT 331
Query: 256 SFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLL 290
+ +D F++L DGLW D V V + L
Sbjct: 332 YHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYL 366
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 27/126 (21%)
Query: 163 TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV 222
T+ VA++G+++ V+ S AI ++ H A +ER R+Q +GG
Sbjct: 167 TIHVASLGNSRCVLK---------------SGRTAIHLSTPHTASSHKERHRVQAAGGVF 211
Query: 223 SS-NGRL--QGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILGCD 271
++ NG L G + +RAFG FKK G V A PD+ +F D I+ G
Sbjct: 212 TTVNGELLLGGVVPXTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGDD-IVAGTA 270
Query: 272 GLWGVF 277
G + F
Sbjct: 271 GAFAHF 276
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 44/196 (22%)
Query: 109 QKRLHANVISAGLPPAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVAN 168
Q +L V LPP + IL+ + L+ +SGG A AV +L ++VAN
Sbjct: 134 QSQLPEGVPQHQLPPQYQKILERLKT-----LEREISGG----AMAVVAVLLNNKLYVAN 184
Query: 169 IGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSG---GTVSSN 225
+G +A++ +S+ VDG L+ + H E R+ + G G +
Sbjct: 185 VGTNRALLCKST-VDG----------LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQV 233
Query: 226 GRLQGRLEVSRAFGDRQFKKFG--------------VVATPDIHSFEVTER-DHFIILGC 270
G + G+ E +R GD + K+G ++A P+IH + + F++L
Sbjct: 234 GIICGQ-ESTRRIGDYKV-KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMS 291
Query: 271 DGLWGVF----GPSDA 282
+GL+ GP A
Sbjct: 292 EGLYKALEAAHGPGQA 307
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 44/204 (21%)
Query: 109 QKRLHANVISAGLPPAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVAN 168
Q +L V LPP + IL+ + L+ +SGG A AV +L ++VAN
Sbjct: 132 QSQLPEGVPQHQLPPQYQKILERLKT-----LEREISGG----AMAVVAVLLNNKLYVAN 182
Query: 169 IGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSG---GTVSSN 225
+G +A++ +S+ VDG L+ + H E R+ + G G +
Sbjct: 183 VGTNRALLCKST-VDG----------LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQV 231
Query: 226 GRLQGRLEVSRAFGDRQFKKFG--------------VVATPDIHSFEVTER-DHFIILGC 270
G + G+ E +R GD + K+G ++A P+IH + + F++L
Sbjct: 232 GIICGQ-ESTRRIGDYKV-KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMS 289
Query: 271 DGLWGVF----GPSDAVEFVQKLL 290
+GL+ GP A + + ++
Sbjct: 290 EGLYKALEAAHGPGQANQEIAAMI 313
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 60/239 (25%)
Query: 90 CAHFAIFDGHGGRLAAEYAQKRLHANVISAGL------PPAKKAILDGFRKTDESLLQES 143
C + +F+G+ G + +RL A ++ L ++ +L F + S L ES
Sbjct: 64 CFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFL-ES 122
Query: 144 VSGGWQD------------------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGS 185
+ + GA AV +L ++VAN+G +A++ +S+ VDG
Sbjct: 123 IDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKST-VDG- 180
Query: 186 NNHLDELSSLKAIVVTRVHKAIYPQERARIQKSG---GTVSSNGRLQGRLEVSRAFGDRQ 242
L+ + H E R+ + G G + G + G+ E +R GD +
Sbjct: 181 ---------LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQ-ESTRRIGDYK 230
Query: 243 FKKFG--------------VVATPDIHSFEVTER-DHFIILGCDGLWGVF----GPSDA 282
K+G ++A P+IH + + F++L +GL+ GP A
Sbjct: 231 V-KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQA 288
>pdb|1YEN|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Oxy (2mm Ihp, 20% Peg) (10 Test Sets)
pdb|1YEN|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Oxy (2mm Ihp, 20% Peg) (10 Test Sets)
pdb|1Y45|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Deoxy Low-Salt (10 Test Sets)
pdb|1Y45|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Deoxy Low-Salt (10 Test Sets)
Length = 146
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 207 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 253
+ P+E++ + G V+ + G GRL V A+ R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYAWTQRFFESFGDLSTPD 52
>pdb|1NQP|B Chain B, Crystal Structure Of Human Hemoglobin E At 1.73 A
Resolution
pdb|1NQP|D Chain D, Crystal Structure Of Human Hemoglobin E At 1.73 A
Resolution
pdb|1YVQ|B Chain B, The Low Salt (Peg) Crystal Structure Of Co Hemoglobin E
(Betae26k) Approaching Physiological Ph (Ph 7.5)
pdb|1YVQ|D Chain D, The Low Salt (Peg) Crystal Structure Of Co Hemoglobin E
(Betae26k) Approaching Physiological Ph (Ph 7.5)
pdb|1YVT|B Chain B, The High Salt (Phosphate) Crystal Structure Of Co
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
pdb|3DUT|B Chain B, The High Salt (Phosphate) Crystal Structure Of Deoxy
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
pdb|3DUT|D Chain D, The High Salt (Phosphate) Crystal Structure Of Deoxy
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
Length = 146
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 207 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 253
+ P+E++ + G V+ + G+ GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGKALGRLLVVYPWTQRFFESFGDLSTPD 52
>pdb|1A00|B Chain B, Hemoglobin (Val Beta1 Met, Trp Beta37 Tyr) Mutant
pdb|1A00|D Chain D, Hemoglobin (Val Beta1 Met, Trp Beta37 Tyr) Mutant
pdb|1YEQ|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Oxy (10 Test Sets)
pdb|1YEQ|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Oxy (10 Test Sets)
pdb|1Y46|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Deoxy Low-Salt (10 Test Sets)
pdb|1Y46|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Deoxy Low-Salt (10 Test Sets)
Length = 146
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 207 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 253
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPYTQRFFESFGDLSTPD 52
>pdb|1Y2Z|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betav34g Deoxy Low-Salt (1 Test Set)
pdb|1Y2Z|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betav34g Deoxy Low-Salt (1 Test Set)
Length = 146
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 207 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 253
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVGYPWTQRFFESFGDLSTPD 52
>pdb|1QI8|B Chain B, Deoxygenated Structure Of A Distal Pocket Hemoglobin
Mutant
pdb|1QI8|D Chain D, Deoxygenated Structure Of A Distal Pocket Hemoglobin
Mutant
pdb|1J7W|B Chain B, Crystal Structure Of Deoxy Hbbetayq, A Site Directed
Mutant Of Hba
pdb|1J7W|D Chain D, Crystal Structure Of Deoxy Hbbetayq, A Site Directed
Mutant Of Hba
pdb|1J7Y|B Chain B, Crystal Structure Of Partially Ligated Mutant Of Hba
pdb|1J7Y|D Chain D, Crystal Structure Of Partially Ligated Mutant Of Hba
pdb|2W72|B Chain B, Deoxygenated Structure Of A Distal Site Hemoglobin Mutant
Plus Xe
pdb|2W72|D Chain D, Deoxygenated Structure Of A Distal Site Hemoglobin Mutant
Plus Xe
Length = 146
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 207 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 253
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEAYGRLLVVYPWTQRFFESFGDLSTPD 52
>pdb|1YE1|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Oxy (2mm Ihp, 20% Peg) (1 Test Set)
pdb|1YE1|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Oxy (2mm Ihp, 20% Peg) (1 Test Set)
pdb|1Y31|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Deoxy Low-Salt (1 Test Set)
pdb|1Y31|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Deoxy Low-Salt (1 Test Set)
Length = 146
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 207 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 253
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVAPWTQRFFESFGDLSTPD 52
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,449,942
Number of Sequences: 62578
Number of extensions: 306750
Number of successful extensions: 807
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 737
Number of HSP's gapped (non-prelim): 43
length of query: 327
length of database: 14,973,337
effective HSP length: 99
effective length of query: 228
effective length of database: 8,778,115
effective search space: 2001410220
effective search space used: 2001410220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)