BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020360
(327 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FE17|SIR1_ARATH NAD-dependent protein deacetylase SRT1 OS=Arabidopsis thaliana
GN=SRT1 PE=2 SV=1
Length = 473
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/331 (67%), Positives = 277/331 (83%), Gaps = 7/331 (2%)
Query: 1 MEACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKH 60
ME CPSCG+EY RDFEVETIGLKETSR+CS KCGAKL+DTVLDWEDALPPKE++PAEKH
Sbjct: 139 MEMCPSCGAEYLRDFEVETIGLKETSRKCSVEKCGAKLKDTVLDWEDALPPKEIDPAEKH 198
Query: 61 CKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVA 120
CK AD+VLCLGTSLQITPACNLPLKCL+GGGKIVIVNLQKTPKDKKA++VIHG VDKVVA
Sbjct: 199 CKKADLVLCLGTSLQITPACNLPLKCLKGGGKIVIVNLQKTPKDKKANVVIHGLVDKVVA 258
Query: 121 GVMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSF 180
GVM+ LN++IPPY+RIDL QII+TQS+S D++F+NWTLR+ SVHG T+QLPFIKS+EVSF
Sbjct: 259 GVMESLNMKIPPYVRIDLFQIILTQSISGDQRFINWTLRVASVHGLTSQLPFIKSIEVSF 318
Query: 181 SDRQKYKEASLDKQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCF 240
SD YK+A LDKQPF +KRRT NETFDI K+N+SDGC C TQ+++PF+FK+ +
Sbjct: 319 SDNHNYKDAVLDKQPFLMKRRTARNETFDIFFKVNYSDGCDCVSTQLSLPFEFKISTEEH 378
Query: 241 E--LDKDDIFQRLRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFES--NCL 296
+DK+ + Q LRE A ++ CGQ+ V+ER+V+S P+SE VYA V++++T+ S + L
Sbjct: 379 VEIIDKEAVLQSLREKAVEESSCGQSGVVERRVVSEPRSEAVVYATVTSLRTYHSQQSLL 438
Query: 297 SNGDLKWLKDGVNGTETSKKRSNSRKRKSRS 327
+NGDLKW + G+ TS+KRS + KRKS++
Sbjct: 439 ANGDLKW---KLEGSGTSRKRSRTGKRKSKA 466
>sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp.
indica GN=SRT1 PE=2 SV=1
Length = 484
Score = 325 bits (834), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/292 (55%), Positives = 211/292 (72%), Gaps = 4/292 (1%)
Query: 2 EACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHC 61
E CPSC EY RDFE+ETIGLK+T RRCSD CGA+L+DTVLDWEDALPP+EM+ A++ C
Sbjct: 141 EICPSCKKEYLRDFEIETIGLKDTPRRCSDKNCGARLKDTVLDWEDALPPEEMDAAKEQC 200
Query: 62 KIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAG 121
+ AD+VLCLGTSLQITPACN+PL L+ GG++ IVNLQ TPKDKKASLVIHG VDKV+AG
Sbjct: 201 QTADLVLCLGTSLQITPACNMPLLSLKNGGRVAIVNLQATPKDKKASLVIHGLVDKVIAG 260
Query: 122 VMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFS 181
VM ++NLRIPPYIR D +QI + S+ KK V WTLR+TS+HG A LPF++SVEVSF
Sbjct: 261 VMYMMNLRIPPYIRTDFVQISLRNSVK--KKCVRWTLRVTSIHGLRAPLPFLRSVEVSFP 318
Query: 182 DRQKYKEASLDKQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFE 241
+R K L +QPF L+R T +N F + L NFSDGCGC + I P DF F
Sbjct: 319 ERPDMKPVVLKEQPFSLQRETSMNRPFVMLLTFNFSDGCGCSSSSIEWPVDFLKQKDSFV 378
Query: 242 LDKDDIFQRLRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFES 293
D+ + Q L+ A GQ+ ++ER+ P++E +++A+V+N+ +++
Sbjct: 379 RDRSLVLQELQHAAEHRSRAGQHAILERE--GVPRAETSIHALVTNIVRYDT 428
>sp|P59941|SIR6_MOUSE NAD-dependent protein deacetylase sirtuin-6 OS=Mus musculus
GN=Sirt6 PE=1 SV=1
Length = 334
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 93/139 (66%), Gaps = 6/139 (4%)
Query: 1 MEACPSCGSEYFRDFEVETIGLKETSRRCSDLK------CGAKLRDTVLDWEDALPPKEM 54
+E CP C ++Y RD V T+GLK T R C+ K C +LRDT+LDWED+LP +++
Sbjct: 138 VEECPKCKTQYVRDTVVGTMGLKATGRLCTVAKTRGLRACRGELRDTILDWEDSLPDRDL 197
Query: 55 NPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGF 114
A++ + AD+ + LGTSLQI P+ NLPL R GG++VIVNLQ T D++A L IHG+
Sbjct: 198 MLADEASRTADLSVTLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHDRQADLRIHGY 257
Query: 115 VDKVVAGVMDLLNLRIPPY 133
VD+V+ +M L L IP +
Sbjct: 258 VDEVMCRLMKHLGLEIPAW 276
>sp|Q8N6T7|SIR6_HUMAN NAD-dependent protein deacetylase sirtuin-6 OS=Homo sapiens
GN=SIRT6 PE=1 SV=2
Length = 355
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 91/139 (65%), Gaps = 6/139 (4%)
Query: 1 MEACPSCGSEYFRDFEVETIGLKETSRRCSDLK------CGAKLRDTVLDWEDALPPKEM 54
+E C C ++Y RD V T+GLK T R C+ K C +LRDT+LDWED+LP +++
Sbjct: 138 VEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDL 197
Query: 55 NPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGF 114
A++ + AD+ + LGTSLQI P+ NLPL R GG++VIVNLQ T D+ A L IHG+
Sbjct: 198 ALADEASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHDRHADLRIHGY 257
Query: 115 VDKVVAGVMDLLNLRIPPY 133
VD+V+ +M L L IP +
Sbjct: 258 VDEVMTRLMKHLGLEIPAW 276
>sp|Q9VH08|SIR6_DROME NAD-dependent protein deacetylase Sirt6 OS=Drosophila melanogaster
GN=Sirt6 PE=2 SV=1
Length = 317
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 1 MEACPSCGSEYFRDFEVETIGLKETSRRC-SDLKCGAK------LRDTVLDWEDALPPKE 53
+E C C ++ VET+G K R C S + + L D VLDWE LP +
Sbjct: 138 IEQCKKCRRQFVSPSAVETVGQKSLQRACKSSMDSKGRSCRSGILYDNVLDWEHDLPEND 197
Query: 54 MNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHG 113
+ H +AD+ + LGT+LQI P+ +LPLK L+ GGK VI NLQ T DKKA+L+I
Sbjct: 198 LEMGVMHSTVADLNIALGTTLQIVPSGDLPLKNLKCGGKFVICNLQPTKHDKKANLIISS 257
Query: 114 FVDKVVAGVMDLLNLRIPPY 133
+VD V++ V LL + IP Y
Sbjct: 258 YVDVVLSKVCKLLGVEIPEY 277
>sp|Q95Q89|SIR24_CAEEL NAD-dependent protein deacetylase sir-2.4 OS=Caenorhabditis elegans
GN=sir-2.4 PE=3 SV=2
Length = 292
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 1 MEACPSCGSEYFRDFEVETIGLKETSRRCSDLK-----CGAKLRDTVLDWEDALPPKEMN 55
+E C SC SEY R+ V ++GL T R C K C KLRD LDW+ + ++
Sbjct: 141 LEVCQSCFSEYVREEIVMSVGLCPTGRNCEGNKRTGRSCRGKLRDATLDWDTEISLNHLD 200
Query: 56 PAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFV 115
K K +LC+GTSL+I P +LPL G K +N Q+T +K IH V
Sbjct: 201 RIRKAWKQTSHLLCIGTSLEIIPMGSLPLDAKSKGIKTTTINYQETAHEKIVETAIHADV 260
Query: 116 DKVVAGVMDLLNLRI 130
++ + + L + +
Sbjct: 261 KLILYSLCNALGVNV 275
>sp|Q0P595|SIR7_BOVIN NAD-dependent protein deacetylase sirtuin-7 OS=Bos taurus GN=SIRT7
PE=2 SV=1
Length = 400
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 1 MEACPSC--GSEYFRDFEVE---TIGLKETSRRCSDLKCGAKLRDTVLDWEDALP---PK 52
+E C +C EY R F+V + +T R C KCG +LRDT++ + + P
Sbjct: 192 IEVCTACTPNREYVRVFDVTERTALHRHQTGRTCH--KCGGQLRDTIVHFGERGTLGQPL 249
Query: 53 EMNPAEKHCKIADVVLCLGTSLQI-----------TPACNLPLKCLRGGGKIVIVNLQKT 101
A + AD +LCLG+SL++ P P K+ IVNLQ T
Sbjct: 250 NWEAATEAASKADTILCLGSSLKVLKKYPHLWCMTKPPSRRP--------KLYIVNLQWT 301
Query: 102 PKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIR 135
PKD A+L +HG D V+ +MD L L IP Y R
Sbjct: 302 PKDDWAALKLHGKCDDVMQLLMDELGLEIPRYSR 335
>sp|B2RZ55|SIR7_RAT NAD-dependent protein deacetylase sirtuin-7 OS=Rattus norvegicus
GN=Sirt7 PE=2 SV=1
Length = 402
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 1 MEACPSC--GSEYFRDFEV-ETIGLKE--TSRRCSDLKCGAKLRDTVLDWEDALP---PK 52
+E C SC EY R F+V E L T R C KCG +LRDT++ + + P
Sbjct: 193 IEVCTSCIPNREYVRVFDVTERTALHRHLTGRTCH--KCGTQLRDTIVHFGERGTLGQPL 250
Query: 53 EMNPAEKHCKIADVVLCLGTSLQI-----------TPACNLPLKCLRGGGKIVIVNLQKT 101
A + AD +LCLG+SL++ P P K+ IVNLQ T
Sbjct: 251 NWEAATEAASKADTILCLGSSLKVLKKYPRLWCMTKPPSRRP--------KLYIVNLQWT 302
Query: 102 PKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIR 135
PKD A+L +HG D V+ +MD L L IP Y R
Sbjct: 303 PKDDWAALKLHGKCDDVMRLLMDELGLEIPVYNR 336
>sp|Q9NRC8|SIR7_HUMAN NAD-dependent protein deacetylase sirtuin-7 OS=Homo sapiens
GN=SIRT7 PE=1 SV=1
Length = 400
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 1 MEACPSC--GSEYFRDFEVE---TIGLKETSRRCSDLKCGAKLRDTVLDWEDALP---PK 52
+E C SC EY R F+V + +T R C KCG +LRDT++ + + P
Sbjct: 192 IEVCTSCVPNREYVRVFDVTERTALHRHQTGRTCH--KCGTQLRDTIVHFGERGTLGQPL 249
Query: 53 EMNPAEKHCKIADVVLCLGTSLQI-----------TPACNLPLKCLRGGGKIVIVNLQKT 101
A + AD +LCLG+SL++ P P K+ IVNLQ T
Sbjct: 250 NWEAATEAASRADTILCLGSSLKVLKKYPRLWCMTKPPSRRP--------KLYIVNLQWT 301
Query: 102 PKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIR 135
PKD A+L +HG D V+ +M L L IP Y R
Sbjct: 302 PKDDWAALKLHGKCDDVMRLLMAELGLEIPAYSR 335
>sp|Q8BKJ9|SIR7_MOUSE NAD-dependent protein deacetylase sirtuin-7 OS=Mus musculus
GN=Sirt7 PE=1 SV=2
Length = 402
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 1 MEACPSC--GSEYFRDFEV-ETIGLKE--TSRRCSDLKCGAKLRDTVLDWEDALP---PK 52
+E C SC EY R F+V E L T R C KCG +LRDT++ + + P
Sbjct: 193 IEVCTSCIPNREYVRVFDVTERTALHRHLTGRTCH--KCGTQLRDTIVHFGERGTLGQPL 250
Query: 53 EMNPAEKHCKIADVVLCLGTSLQI-----------TPACNLPLKCLRGGGKIVIVNLQKT 101
A + AD +LCLG+SL++ P P K+ IVNLQ T
Sbjct: 251 NWEAATEAASKADTILCLGSSLKVLKKYPRLWCMTKPPSRRP--------KLYIVNLQWT 302
Query: 102 PKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIR 135
PKD A+L +HG D V+ +M+ L L IP Y R
Sbjct: 303 PKDDWAALKLHGKCDDVMQLLMNELGLEIPVYNR 336
>sp|Q9VAQ1|SIR7_DROME NAD-dependent protein deacetylase Sirt7 OS=Drosophila melanogaster
GN=Sirt7 PE=1 SV=2
Length = 771
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 13/146 (8%)
Query: 1 MEACPSC--GSEYFRDFEVETIGLK---ETSRRCSDLKCGAKLRDTVLDWED---ALPPK 52
+E C +C S Y+R F+ + + +T R C +C L DT++ + + P
Sbjct: 216 VEVCKNCRPNSVYWRQFDTTEMTARYCHKTHRLCH--RCSEPLYDTIVHFGERGNVKWPL 273
Query: 53 EMNPAEKHCKIADVVLCLGTSLQITPACNLPLKC---LRGGGKIVIVNLQKTPKDKKASL 109
A + + ADV+LCLG+SL++ + R KI +VNLQ TPKD AS+
Sbjct: 274 NWAGATANAQRADVILCLGSSLKVLKKYTWLWQMDRPARQRAKICVVNLQWTPKDAIASI 333
Query: 110 VIHGFVDKVVAGVMDLLNLRIPPYIR 135
I+G D+V+A +M LL++ +P Y +
Sbjct: 334 KINGKCDQVMAQLMHLLHIPVPVYTK 359
>sp|Q5L014|NPD1_GEOKA NAD-dependent protein deacetylase 1 OS=Geobacillus kaustophilus
(strain HTA426) GN=cobB1 PE=3 SV=1
Length = 242
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 33 KCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGK 92
+CG LR +V+ + + LP K + A + + AD+ L LG+SLQ++PA LPL R G K
Sbjct: 143 ECGGVLRPSVVLFGEPLPEKAITEAWEAAQQADLFLVLGSSLQVSPANQLPLVAKRNGAK 202
Query: 93 IVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLN 127
+VI+N + T D A VIH + + V++ LN
Sbjct: 203 LVIINWEPTELDDLADAVIH---QRKIGEVLNELN 234
>sp|Q5V4Q5|NPD_HALMA NAD-dependent protein deacetylase OS=Haloarcula marismortui (strain
ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=cobB
PE=3 SV=1
Length = 260
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDL----KCGAKLRDTVLDWEDALPPKEMNPAEK 59
C CG + RD EV + E + SDL CG R V+ + + +P MN A++
Sbjct: 140 CDDCG--HRRDAEV----VFEQAAESSDLPPRCDCGGVYRPDVVLFGEPMPDVAMNEAQR 193
Query: 60 HCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVV 119
+ +DV L +G+SL + PA LP G +V+VN ++TP+D A+ V+ V +V+
Sbjct: 194 LARDSDVFLAVGSSLSVQPASLLPKIAAEGDSTLVVVNYEETPRDASAAHVLRADVTQVL 253
Query: 120 AGVMDLL 126
+++ L
Sbjct: 254 PAIVERL 260
>sp|Q73KE1|NPD_TREDE NAD-dependent protein deacetylase OS=Treponema denticola (strain
ATCC 35405 / CIP 103919 / DSM 14222) GN=cobB PE=3 SV=1
Length = 251
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSR--RCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHC 61
C +C Y FE ET +T RC KCG+ ++ + + +ALP K + AE
Sbjct: 130 CINCS--YTETFE-ETAKTAKTGEVPRCP--KCGSPIKPAITFFGEALPQKALMKAETEA 184
Query: 62 KIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVI 111
+D +L LGTSL + PA LP LR GGKI IVN Q T D L+
Sbjct: 185 SKSDFMLVLGTSLLVYPAAALPAYTLRNGGKIAIVNNQPTQFDSYTDLLF 234
>sp|Q8ELR0|NPD_OCEIH NAD-dependent protein deacetylase OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=cobB PE=3 SV=1
Length = 236
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C SCG EY VE C CG LR +++ + + LP + A +
Sbjct: 122 CQSCGKEYSSKEYVEN------EYHCD---CGGVLRPSIILFGEMLPQEAFQTAFNDAEK 172
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVI 111
AD+ + LG+SL ++PA +PL G K+VIVN TP D+ A + I
Sbjct: 173 ADLFVVLGSSLTVSPANQIPLIAKENGAKLVIVNQDPTPYDQYADMTI 220
>sp|Q8ZU41|NPD1_PYRAE NAD-dependent protein deacetylase 1 OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=cobB1 PE=3 SV=1
Length = 254
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 4 CPSCGSEYFRDFEVETIGLKET-SRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCK 62
C +CGS+Y E + +++ + RC KCG ++ V+ + + LP + A +
Sbjct: 131 CTNCGSKYAL---AEALKWRKSGAPRCP--KCGGVIKPDVVFFGEPLPQDALREAFMLAE 185
Query: 63 IADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGV 122
+A+V + +GTSL + PA LPL + G K+VI+N +T D A +I G ++V+ +
Sbjct: 186 MAEVFMAIGTSLAVYPANQLPLVAKKRGAKLVIINADETYYDFFADYIIRGRAEEVLPKL 245
Query: 123 MDLL 126
+D L
Sbjct: 246 LDRL 249
>sp|A8MBU4|NPD_CALMQ NAD-dependent protein deacetylase OS=Caldivirga maquilingensis
(strain ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167)
GN=cobB PE=3 SV=1
Length = 257
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C C ++Y + E RC KCG LR V+ + + P E+N A + +
Sbjct: 131 CMRCKTQYPFTLALRKYEEGENPPRCP--KCGGILRPNVVLFGE--PVNEINRALEIAAL 186
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIH 112
+DV L +G+SL + PA +PL GG+++I+NL+ T D A +V+H
Sbjct: 187 SDVALVVGSSLTVYPAAYVPLVVKEHGGRLIIINLEPTDYDDYADVVLH 235
>sp|B5YJW3|NPD_THEYD NAD-dependent protein deacetylase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=cobB PE=3 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C C Y + ++ + +E RC CG ++ T++ + + +P KE+ A++
Sbjct: 131 CLDCEKVYPLEEVLKMLKEQELDLRCE--VCGGIIKPTIVFFGEPMPEKELLMAQQIANK 188
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
D++ +GTSLQ+ PA ++P + G K++ +N +T D A ++ + KV+ ++
Sbjct: 189 CDIMFVIGTSLQVEPAASIPRIAYQNGAKLIFINKVQTEWDWIAEIIFYDSAGKVLKDIL 248
Query: 124 DLL 126
D++
Sbjct: 249 DVI 251
>sp|Q8IKW2|SIR2B_PLAF7 NAD-dependent protein deacetylase Sir2B OS=Plasmodium falciparum
(isolate 3D7) GN=Sir2B PE=1 SV=1
Length = 1304
Score = 58.2 bits (139), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 2 EACPSCGSEYFRDFEVETIGLKETSRRCSDLKCG----AKLRDTVLDWEDALPPKEMNPA 57
E C CG Y RD+ + TI K T C C D +LDW ++ +
Sbjct: 300 ERCDFCGRRYLRDYLISTISFKPTGSLC--FLCSFPPIGVCTDVLLDWNNSYEEFFHLNS 357
Query: 58 EKHCKIADVVLCLGTSLQITPACNLP--LKCLRGGGKIVIVNLQKTPKDKKASLVIHGFV 115
KH +IAD CLG+S I PA + P K ++N QK+ K+ +L IH V
Sbjct: 358 IKHSQIADFHFCLGSSFYIVPASSYPSKKKYANANSYSCVINYQKSFLSKEVNLNIHSNV 417
Query: 116 DKV 118
+ +
Sbjct: 418 NNI 420
>sp|Q899G3|NPD_CLOTE NAD-dependent protein deacetylase OS=Clostridium tetani (strain
Massachusetts / E88) GN=cobB PE=3 SV=1
Length = 247
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 23 KETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNL 82
KE +C CG ++ V+ +E+ L +N A ++ + +DV++ GTSL + PA NL
Sbjct: 146 KEVVPKCD--VCGGIVKPDVVLYEEPLNMDNINNAVRYVENSDVLIVGGTSLVVYPAANL 203
Query: 83 PLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLL 126
G K+V++N TP D+KA +VI+ + ++ G+++ L
Sbjct: 204 I--HYYKGNKLVLINKSSTPYDRKAQIVINDSIGSILGGIVEEL 245
>sp|Q9WYW0|NPD_THEMA NAD-dependent protein deacetylase OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=cobB PE=1
SV=1
Length = 246
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 29 CSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLR 88
C D C + +R ++ + + LP + A A +++ LG+SL + PA LPL +R
Sbjct: 148 CDD--CNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVR 205
Query: 89 GGGKIVIVNLQKTPKDKKASL 109
GGK+VIVNL +TP D A+L
Sbjct: 206 SGGKLVIVNLGETPFDDIATL 226
>sp|O28597|NPD1_ARCFU NAD-dependent protein deacylase 1 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=cobB1 PE=1 SV=1
Length = 245
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C SC + FEVE+ +C KCG+ LR V+ + + LPP ++ A + +
Sbjct: 124 CTSCNN----SFEVESAPKIPPLPKCD--KCGSLLRPGVVWFGEMLPPDVLDRAMREVER 177
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVV 119
ADV++ GTS + PA +LPL + GG I+ +N +TP A + G +V+
Sbjct: 178 ADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDETPLTPIADYSLRGKAGEVM 233
>sp|Q8U1Q1|NPD_PYRFU NAD-dependent protein deacylase OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=cobB PE=3 SV=2
Length = 250
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 4 CPSCGS-EYFRDFEVETIG--LKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKH 60
C SC EY + E + IG L + RC KCG+ LR V+ + +ALP KE+ A
Sbjct: 124 CTSCSYREYLK--ESDRIGWLLSQELPRCP--KCGSLLRPDVVWFGEALPEKELTTAFSL 179
Query: 61 CKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVA 120
K ADVVL +GTS + PA +P GG +V +N++ + A + G +V+
Sbjct: 180 AKKADVVLVVGTSGVVYPAAYIPYIVKESGGIVVEINIEPSAITPIADFFLRGKAGEVLP 239
Query: 121 GVMD 124
+++
Sbjct: 240 KLVE 243
>sp|Q974M6|NPD_SULTO NAD-dependent protein deacetylase OS=Sulfolobus tokodaii (strain
DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=cobB PE=3
SV=2
Length = 250
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLR-DTVLDWEDALPPKEMNPAEKHCK 62
C +C Y D ++ I + +C +CG +R D VL E P ++ A + +
Sbjct: 124 CVNCLKTYDSDTVLDKIDKEGLPPKC---ECGGVIRPDVVLFGE---PVYNISSALEIAR 177
Query: 63 IADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGV 122
AD+VL +G+SL + PA +PL GGK++I+N ++TP D A +V+ V++ + V
Sbjct: 178 EADLVLAIGSSLTVYPANMIPLTVKEMGGKLIILNAEETPLDNIADIVVRERVEEFLPCV 237
Query: 123 MDLL 126
+D +
Sbjct: 238 VDYI 241
>sp|O58669|NPD_PYRHO NAD-dependent protein deacylase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=cobB PE=3 SV=1
Length = 249
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 33 KCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGK 92
KCG+ LR V+ + + LP KE+N A K K ADVV+ +GTS + PA +P GG
Sbjct: 152 KCGSLLRPDVVWFGEPLPSKELNEAFKLAKEADVVIVVGTSGLVYPAAYIPYIVKDSGGV 211
Query: 93 IVIVNLQKTPKDKKASLVIHG 113
++ +N+QK+ A + G
Sbjct: 212 VIEINVQKSGITPIADFFLRG 232
>sp|Q67KQ0|NPD_SYMTH NAD-dependent protein deacetylase OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=cobB PE=3 SV=1
Length = 251
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 4 CPSCGSEY---FRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKH 60
C CG + D EVET + RC + CG L+ V+ +E+ALP + A +
Sbjct: 127 CLRCGRRFPSRLIDVEVET---EADIPRCPE--CGGVLKPGVVLFEEALPADAIEAAIEA 181
Query: 61 CKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVI 111
AD+ L +G+SL++ PA LP+ ++ GG++ I NL T D +A+ +
Sbjct: 182 AMKADLFLVVGSSLEVGPANQLPVLAVQHGGRLAIFNLTPTFLDPRATWIF 232
>sp|Q9KEE5|NPD_BACHD NAD-dependent protein deacetylase OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=cobB PE=3 SV=1
Length = 237
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 34 CGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKI 93
CG +R V+ + + L + AE+H K AD+ L LG+SL ++PA P G K+
Sbjct: 142 CGGFIRPAVVLFGEMLNTDTLALAERHTKEADLFLVLGSSLVVSPANLFPKIAKECGAKL 201
Query: 94 VIVNLQKTPKDKKASLVIH 112
VIVN +TP D A LVI
Sbjct: 202 VIVNHDETPLDPLADLVIQ 220
>sp|Q6A5T5|NPD_PROAC NAD-dependent protein deacetylase OS=Propionibacterium acnes
(strain KPA171202 / DSM 16379) GN=cobB PE=3 SV=1
Length = 244
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C +CG + ++ G+ RCS CG +R V+ +E++L ++++ A
Sbjct: 129 CLACGRAHPLSVIMDAPGVP----RCS---CGGMVRPEVVLYEESLRSQDLDNATTAIST 181
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGV 122
AD+++ GTSL + PA L L+ R G +V +N + T D+ A LVIH + K ++ V
Sbjct: 182 ADLLIVGGTSLNVYPAAAL-LRFFR-GRHLVFINREATGYDRAADLVIHDGLGKTLSAV 238
>sp|Q4JBN2|NPD_SULAC NAD-dependent protein deacetylase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=cobB PE=3 SV=2
Length = 252
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 4 CPSCGSEYFRDFE-VETIGLKETSRRCSDLKCGAKLR-DTVLDWEDALPPKEMNPAEKHC 61
C SC R ++ +E + E +CG L+ D VL E P + A +
Sbjct: 128 CTSC----LRSYDSLEVLARVEKGEVIPRCECGGILKPDVVLFGE---PVHGIYEAMRIA 180
Query: 62 KIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHG----FVDK 117
+D+VL +G+SL + PA +PL R GG ++I+N ++TP D+ A LVI F+ +
Sbjct: 181 NESDLVLAIGSSLTVYPANQIPLIVKRNGGGLIILNGEETPYDEYADLVIRERIEIFLPE 240
Query: 118 VVAGVMDL 125
V++ + L
Sbjct: 241 VISHIQSL 248
>sp|Q8R9N6|NPD1_THETN NAD-dependent protein deacylase 1 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=cobB1 PE=3 SV=1
Length = 242
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 33 KCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGK 92
KCG+ +R V+ + + LP ++ A + + AD+ + +GTSL + PA +LP L G
Sbjct: 148 KCGSIVRPDVVWFGEPLPSDKLTEAMELSQRADLFIVIGTSLMVQPAASLPFLALERGAF 207
Query: 93 IVIVNLQKTPKDKKASLVIH 112
+V V+ ++TP +KA L
Sbjct: 208 VVEVSPEETPLSRKAHLFFQ 227
>sp|Q9UZE7|NPD_PYRAB NAD-dependent protein deacylase OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=cobB PE=3 SV=1
Length = 250
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 4 CPSCG-SEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCK 62
C C EY ++ + LKE +C +CG+ LR V+ + + LP +E++ A K +
Sbjct: 124 CTKCNFKEYLKESQRLEEVLKEDLPKCP--RCGSLLRPDVVWFGEPLPREELDRAFKLAE 181
Query: 63 IADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGV 122
AD VL +GTS + PA +P GG ++ VN++++ A + G +V+ V
Sbjct: 182 KADAVLVVGTSGLVYPAAYIPYIVKESGGTVIEVNVEESAITPIADFFLRGRAGEVLPRV 241
Query: 123 M 123
+
Sbjct: 242 V 242
>sp|Q5WKC8|NPD_BACSK NAD-dependent protein deacetylase OS=Bacillus clausii (strain
KSM-K16) GN=cobB PE=3 SV=1
Length = 237
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C CG Y +V+ + S CS CG +R +V+ + + L + AE+H
Sbjct: 121 CIQCGQHY----DVDRYMNNQPS--CS---CGGFIRPSVVLFGEPLDSNILALAEQHSIE 171
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVI 111
ADV + LG+SL ++PA P G K++IVN TP D A V+
Sbjct: 172 ADVFIVLGSSLVVSPANLFPRIAKEHGAKLIIVNHDSTPLDTIADYVV 219
>sp|Q89LY4|NPD1_BRAJA NAD-dependent protein deacetylase 1 OS=Bradyrhizobium japonicum
(strain USDA 110) GN=cobB1 PE=3 SV=1
Length = 254
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C CG Y D+ V+ ++ + C+ C ++ + + +P +EM A +
Sbjct: 136 CVGCGQTYQLDW-VKRRFDQDGAPNCT--VCDEPVKTATISFGQMMPEEEMQRATALSRA 192
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVI 111
D+ + +G+SL + PA P+ R G ++VI+N + T +D A LVI
Sbjct: 193 CDLFIAIGSSLVVWPAAGFPMMAKRAGARLVIINREPTEQDDIADLVI 240
>sp|Q8ZT00|NPD2_PYRAE NAD-dependent protein deacylase 2 OS=Pyrobaculum aerophilum (strain
ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=cobB2 PE=3 SV=1
Length = 249
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C CGS Y D VE E C KCG LR V+ + + LP + A + +
Sbjct: 122 CVKCGSVYILDKPVE-----EVPPLCR--KCGGLLRPDVVWFGEPLPQEAWRAAVELASV 174
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
+DV+L +GTS + PA +P G ++V +N++ + A + I G +V+ ++
Sbjct: 175 SDVLLVVGTSGVVYPAAYIPRIAKEAGARVVEINVEPSAITPIADVFIQGRAGEVLPRLV 234
Query: 124 DLLNLRI 130
+ + R+
Sbjct: 235 EEVKRRL 241
>sp|Q8XNS6|NPD_CLOPE NAD-dependent protein deacetylase OS=Clostridium perfringens
(strain 13 / Type A) GN=cobB PE=3 SV=1
Length = 244
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C C + Y F +E+ G+ +C+ KCG ++ V+ +E+ L + A
Sbjct: 131 CVDCHTFYDEKFILESKGVP----KCT--KCGGIVKPDVVLYEEPLDDNVIRGAIDAISK 184
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
AD ++ GTSL + PA L RG +V++N T D KA LVI+ + KV+ V+
Sbjct: 185 ADTLIIGGTSLVVYPAAGLINYYFRGK-NLVLINKSSTQADSKADLVINDSIGKVLGKVI 243
Query: 124 D 124
D
Sbjct: 244 D 244
>sp|O67919|NPD_AQUAE NAD-dependent protein deacylase OS=Aquifex aeolicus (strain VF5)
GN=cobB PE=3 SV=1
Length = 239
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C CG+E + T L E +C KCG LR V+ + ++LP ++ A + +
Sbjct: 115 CVECGNERYE----YTTPLPEIPPKCE--KCGGLLRPGVVWFGESLPVDALSRAYELSRE 168
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASL 109
A V + +GTS + PA LP G +++ VN ++TP K A +
Sbjct: 169 AHVFIVVGTSGVVYPAAELPFVAKENGAQVIEVNPEETPITKIADM 214
>sp|Q8CNF4|NPD_STAES NAD-dependent protein deacetylase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=cobB PE=3 SV=1
Length = 246
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C +C EY + + V T LK C KCG +R ++ + + L K + A +
Sbjct: 132 CINCYEEYSKSY-VMTHHLK----YCE--KCGNVIRPDIVLYGEMLNQKTVFKALDKIQH 184
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
AD ++ LG+SL + PA + G +VI+N TP D ASLVIH + V+ ++
Sbjct: 185 ADTLIVLGSSLVVQPAAGFVSEF--KGDNLVIINRDATPYDHTASLVIHDDMTSVIEEIV 242
Query: 124 D 124
+
Sbjct: 243 N 243
>sp|Q8Y015|NPD_RALSO NAD-dependent protein deacylase OS=Ralstonia solanacearum (strain
GMI1000) GN=cobB PE=3 SV=1
Length = 246
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 28 RCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCL 87
RC+ CGA LR V+ + + LP AE+ DV L +GTS + PA LP
Sbjct: 152 RCA--ACGAMLRPGVVWFGERLPVVANYRAEEAANTCDVCLVVGTSGMVYPAAGLPGLAK 209
Query: 88 RGGGKIVIVNLQKTPKDKKASLVIH 112
G ++++VN + + D+ A LVIH
Sbjct: 210 DHGARVIVVNPEPSVLDETADLVIH 234
>sp|Q5HM33|NPD_STAEQ NAD-dependent protein deacetylase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=cobB PE=3 SV=1
Length = 246
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C +C EY + + + + C KCG +R ++ + + L K + A +
Sbjct: 132 CINCYEEYSKSY-----FMTHHLKYCE--KCGNVIRPDIVLYGEMLNQKTVFKALDKIQH 184
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
AD ++ LG+SL + PA + G +VI+N TP D ASLVIH + V+ ++
Sbjct: 185 ADTLIVLGSSLVVQPAAGFVSEF--KGDNLVIINRDATPYDHTASLVIHDDMTSVIEEIV 242
Query: 124 D 124
+
Sbjct: 243 N 243
>sp|Q5JG47|NPD_PYRKO NAD-dependent protein deacylase OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=cobB PE=3 SV=1
Length = 257
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 33 KCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGK 92
KCG+ LR V+ + + LP + + A + ADVVL +GTS + PA +P GGK
Sbjct: 153 KCGSLLRPDVVWFGEPLPREALEEAFSLAERADVVLVVGTSGVVYPAAYVPYIVKERGGK 212
Query: 93 IVIVNLQKTPKDKKASLVIHGFVDKVV 119
++ VN++++ A + I G +V+
Sbjct: 213 VIEVNVERSGITPIADVFIRGKAGEVM 239
>sp|Q97MB4|NPD_CLOAB NAD-dependent protein deacetylase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=cobB PE=3 SV=1
Length = 245
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C CG + F++E + ET+ D KCG ++ V+ +E+ L + + K
Sbjct: 133 CMDCG----KSFDLEYVIKSETTIPKCD-KCGGIVKPDVVLYEEGLDDSIIQNSVKAISE 187
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
AD ++ GTSL + PA L ++ + G K++++N T D +A LVI + KV+ V+
Sbjct: 188 ADTLIVGGTSLVVYPAAGL-IRYFK-GNKLILINKSATAYDNEADLVISDSIGKVLETVI 245
>sp|Q8R984|NPD2_THETN NAD-dependent protein deacetylase 2 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=cobB2 PE=3 SV=1
Length = 250
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 3 ACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCK 62
+C CG + + E + +E RC +CG LR V+ + D +P + A K +
Sbjct: 132 SCLRCGEKVSFELLEEKVAKEEIPPRCD--RCGGMLRPDVVLFGDPMP-HAFDLALKEVQ 188
Query: 63 IADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVI 111
+D+++ +G+SL + P LP + G ++I+N +TP D KA +VI
Sbjct: 189 ESDLLIVIGSSLVVAPVNFLP-GMVDG---LIIINATETPYDYKADVVI 233
>sp|Q6N6U0|NPD_RHOPA NAD-dependent protein deacetylase OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=cobB PE=3 SV=1
Length = 253
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C CG + D+ E + C+ C ++ + + ++P M A + +
Sbjct: 134 CIGCGKRHELDWVREWFFRTGHAPHCT--ACDEPVKTATVSFGQSMPSDAMRRATELAQH 191
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVI 111
D+ + +G+SL + PA P+ G K+VI+N + T +D+ A LVI
Sbjct: 192 CDLFIAIGSSLVVWPAAGFPMLAKECGAKLVIINREPTEQDEIADLVI 239
>sp|Q6GEN2|NPD_STAAR NAD-dependent protein deacetylase OS=Staphylococcus aureus (strain
MRSA252) GN=cobB PE=3 SV=1
Length = 243
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C +C Y + ++ T + C + CG +R ++ + + L + A +
Sbjct: 131 CNACHKSYMKSDVID-----RTLKHCDN--CGGAIRPDIVLYGEMLDQPTIIRALNKIED 183
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
AD ++ LG+SL + PA L + +G ++I+N +TP D A+LVIH + VV +M
Sbjct: 184 ADTLVVLGSSLVVQPAAGL-ISNFKGD-NLIIINKDRTPYDNDATLVIHDDMVSVVKSLM 241
>sp|Q8CJM9|NPD2_STRCO NAD-dependent protein deacetylase 2 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=cobB2 PE=3 SV=1
Length = 241
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C CG+ + I E C L CG L+ + + + L P + A K
Sbjct: 120 CTGCGARGPMADVLARIEAGEDDPPC--LDCGGVLKTATVMFGERLDPVVLGEAAAISKA 177
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVI 111
V + +GTSLQ+ PA L + G ++V+VN + TP D+ A VI
Sbjct: 178 CQVFVAVGTSLQVEPAAGLARVAVEHGARLVVVNAEPTPYDELADEVI 225
>sp|P66816|NPD_STAAN NAD-dependent protein deacetylase OS=Staphylococcus aureus (strain
N315) GN=cobB PE=3 SV=1
Length = 243
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C +C Y + ++ T + C + CG +R ++ + + L + A +
Sbjct: 131 CNACHKSYTKSDVID-----RTLKHCDN--CGGAIRPDIVLYGEMLDQPTIIRALNKIEH 183
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
AD ++ LG+SL + PA L + +G ++I+N +TP D A+LVIH + VV +M
Sbjct: 184 ADTLVVLGSSLVVQPAAGL-ISHFKGD-NLIIINKDRTPYDSDATLVIHDDMVSVVKSLM 241
>sp|P66815|NPD_STAAM NAD-dependent protein deacetylase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=cobB PE=3 SV=1
Length = 243
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C +C Y + ++ T + C + CG +R ++ + + L + A +
Sbjct: 131 CNACHKSYTKSDVID-----RTLKHCDN--CGGAIRPDIVLYGEMLDQPTIIRALNKIEH 183
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
AD ++ LG+SL + PA L + +G ++I+N +TP D A+LVIH + VV +M
Sbjct: 184 ADTLVVLGSSLVVQPAAGL-ISHFKGD-NLIIINKDRTPYDSDATLVIHDDMVSVVKSLM 241
>sp|Q8NVC8|NPD_STAAW NAD-dependent protein deacetylase OS=Staphylococcus aureus (strain
MW2) GN=cobB PE=3 SV=1
Length = 243
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C +C Y + ++ T + C + CG +R ++ + + L + + +
Sbjct: 131 CNACHKSYTKSDVID-----RTLKHCDN--CGGAIRPDIVLYGEMLDQPTIIRSLNKIEH 183
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
AD ++ LG+SL + PA L + +G ++I+N +TP D+ A+LVIH + VV +M
Sbjct: 184 ADTLVVLGSSLVVQPAAGL-ISNFKGD-NLIIINKDRTPYDRDATLVIHDDMVSVVKSLM 241
>sp|Q6G7B7|NPD_STAAS NAD-dependent protein deacetylase OS=Staphylococcus aureus (strain
MSSA476) GN=cobB PE=3 SV=1
Length = 243
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 4 CPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKI 63
C +C Y + ++ T + C + CG +R ++ + + L + + +
Sbjct: 131 CNACHKSYTKSDVID-----RTLKHCDN--CGGAIRPDIVLYGEMLDQPTIIRSLNKIEH 183
Query: 64 ADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVM 123
AD ++ LG+SL + PA L + +G ++I+N +TP D+ A+LVIH + VV +M
Sbjct: 184 ADTLVVLGSSLVVQPAAGL-ISNFKGD-NLIIINKDRTPYDRDATLVIHDDMVSVVKSLM 241
>sp|Q9CBW6|NPD_MYCLE NAD-dependent protein deacylase OS=Mycobacterium leprae (strain TN)
GN=cobB PE=3 SV=1
Length = 237
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 34 CGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKI 93
CG +R ++ + + LP + A + + DV++ +GTS + PA LP L G +
Sbjct: 140 CGGLIRPAIVWFGEPLPDEPWRRAVEATETTDVMVVVGTSAIVYPAAGLPELALSRGAVV 199
Query: 94 VIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLL 126
+ VN + TP K A++ I + + G++ L
Sbjct: 200 IEVNPEPTPLTKNATISIRETASQALPGLLQRL 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,274,804
Number of Sequences: 539616
Number of extensions: 4744485
Number of successful extensions: 10774
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 10630
Number of HSP's gapped (non-prelim): 136
length of query: 327
length of database: 191,569,459
effective HSP length: 118
effective length of query: 209
effective length of database: 127,894,771
effective search space: 26730007139
effective search space used: 26730007139
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)