BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020365
(327 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/303 (64%), Positives = 233/303 (76%), Gaps = 5/303 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 275 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPIITPAYPCMNSS 334
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ TL+VM EQFQ GN+ICE EIEL KA+WSALFE Y FFEAY+NYLQ+DI+A
Sbjct: 335 YNVSISTLRVMMEQFQYGNKICE-----EIELNKAQWSALFEPYLFFEAYKNYLQIDIIA 389
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADADDLL WKGWVESR RQLTLKIE+DT G+LQCHPYPN+YID SK CP+ AFF GL R+
Sbjct: 390 ADADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAFFMGLQRR 449
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ + +E QQFD +GTV+ FR+ I+ Y + G D+Y S+ RR LP+FVFPDGYK R
Sbjct: 450 KGVSGQEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQLPAFVFPDGYKRSRT 509
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPG 300
SRH N+Q+GKP + ++ S E LKRK +HE+ +VRPDK K+A +S + Q VSP
Sbjct: 510 SRHPNQQAGKPSDVSATSRAGSVEGHLKRKNDHEVVDVRPDKPEKRASVSPQRLQSVSPE 569
Query: 301 MTT 303
T
Sbjct: 570 SNT 572
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/301 (61%), Positives = 223/301 (74%), Gaps = 7/301 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF +WDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 272 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSS 331
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM +QF GN+IC+ EIEL KA+WSALF+ Y FFEAY+NYLQVDI+A
Sbjct: 332 YNVSASTLRVMVDQFCYGNKICD-----EIELNKAQWSALFQPYIFFEAYKNYLQVDIIA 386
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+D DDLL W+GWVESR R LTLKIE+DTNG+LQCHPYP++Y+D SKPC +SAFF GL RK
Sbjct: 387 SDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSKPCAHSAFFMGLQRK 446
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR+ I+ Y + G DI+ S+V R+ LP+FVFPDGYK R
Sbjct: 447 EGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPDGYKRTRM 506
Query: 241 SRHFNEQSGKPCEDVKMCQSCS--SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVS 298
RH + Q+ +D C S SER +KRK E+ + +PDK K+A IS + + VS
Sbjct: 507 PRHISHQAEITGDDATNCYSGPGLSERCIKRKNYSEMVDKKPDKPDKRASISPQRLECVS 566
Query: 299 P 299
P
Sbjct: 567 P 567
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/343 (56%), Positives = 235/343 (68%), Gaps = 33/343 (9%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF +WDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQF+ GN+IC+ EIEL KA+WSALF+ Y FFEAY+NYLQVDI+A
Sbjct: 331 YNVSASTLRVMMEQFRYGNKICD-----EIELNKAQWSALFQPYIFFEAYKNYLQVDIIA 385
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+DADDLL W+GWVESR R LTLKIE+DTNG+LQCHPYPN+Y+D SK C +SAFF GL RK
Sbjct: 386 SDADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSKLCAHSAFFMGLQRK 445
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR+ I+ Y + G DI+ S+V R+ LP+FVFP GYK R
Sbjct: 446 EGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPGGYKRTRM 505
Query: 241 SRHFNEQSGKPCEDVKMC----QSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQP 296
RH + Q+ K +D C S SSER +KRK E+ + +P K K+A IS + +
Sbjct: 506 PRHISHQAEKTGDDATKCYSGSGSGSSERCIKRKSCPEMVDKKPGKPDKRASISPQRLEC 565
Query: 297 VSP------------------------GMTTEDPTNNSEVMSS 315
VSP G TT+D +N EV SS
Sbjct: 566 VSPESCTSKSGGTTQMSIECIEVVRLAGSTTKDANDNCEVKSS 608
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/303 (60%), Positives = 220/303 (72%), Gaps = 10/303 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGFSVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSS 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ TL+VM EQFQ GN+ICE IEL A+W ALFE Y FFE+Y+NYLQVDIVA
Sbjct: 327 YNVSISTLRVMMEQFQYGNKICE-----GIELSNAQWGALFEPYLFFESYKNYLQVDIVA 381
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D DDL WKGWVESR RQLTL IE+DT G LQCHPYP++Y+D SK C + AFF GL RK
Sbjct: 382 VDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRK 441
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E QQFD +GTV FR I+ Y + G +IY S+V R+ +PS+VFP+GYK RP
Sbjct: 442 QGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRP 501
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPG 300
R N+Q G + C++ SSE+ +KRKK+ E +V DK+ K+ IS + VSP
Sbjct: 502 QRPVNQQQGD-----EACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPE 556
Query: 301 MTT 303
+ +
Sbjct: 557 IIS 559
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/303 (60%), Positives = 220/303 (72%), Gaps = 10/303 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGFSVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSS 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ TL+VM EQFQ GN+ICE IEL A+W ALFE Y FFE+Y+NYLQVDIVA
Sbjct: 318 YNVSISTLRVMMEQFQYGNKICE-----GIELSNAQWGALFEPYLFFESYKNYLQVDIVA 372
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D DDL WKGWVESR RQLTL IE+DT G LQCHPYP++Y+D SK C + AFF GL RK
Sbjct: 373 VDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRK 432
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E QQFD +GTV FR I+ Y + G +IY S+V R+ +PS+VFP+GYK RP
Sbjct: 433 QGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRP 492
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPG 300
R N+Q G + C++ SSE+ +KRKK+ E +V DK+ K+ IS + VSP
Sbjct: 493 QRPVNQQQGD-----EACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPE 547
Query: 301 MTT 303
+ +
Sbjct: 548 IIS 550
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 219/306 (71%), Gaps = 8/306 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVY QWRWPNPVM+C IE EL F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 272 MLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 331
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN IC+ EIEL K +WS+LFE Y FFEAY+NYLQVD++A
Sbjct: 332 YNVSQSTLRVMTEQFQFGNTICQ-----EIELNKQQWSSLFEQYMFFEAYKNYLQVDVLA 386
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
DA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R
Sbjct: 387 LDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFRHCAFFMGLQRA 446
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y R G D+Y S+V RR LPSFVFP GYK R
Sbjct: 447 EGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQLPSFVFPKGYKRPRQ 506
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS---EVPQPV 297
SRH N+Q +P E V S S + KRK ++E + RP+K K+A S + PV
Sbjct: 507 SRHQNQQCREPGEGVVGSLSDSVDGYAKRKNDNETMDTRPEKREKRASRSPHSLDAVSPV 566
Query: 298 SPGMTT 303
S G+TT
Sbjct: 567 SSGITT 572
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 184/306 (60%), Positives = 220/306 (71%), Gaps = 8/306 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE +L F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN IC+ EIEL K WS+LF+ Y FFEAY+NYLQVD++A
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQ-----EIELNKQHWSSLFQQYMFFEAYKNYLQVDVLA 385
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R
Sbjct: 386 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRA 445
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +ECQQFD +GTV FR+ ++ Y R G D++ S+V RR LPSFVFP+GYK R
Sbjct: 446 DGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQ 505
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFIS---SEVPQPV 297
SRH ++Q +P ++ S S ER KRK + EI RP+K K+A S + P
Sbjct: 506 SRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPD 565
Query: 298 SPGMTT 303
S G+TT
Sbjct: 566 SSGITT 571
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 183/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 328 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 382
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
DA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 383 GDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 443 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 502
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N+ GK ED + S S ER KRK + E+ + RP+K K+A +S + VSP
Sbjct: 503 SRHQNQPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEKRASLSPQSLDIVSP 562
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 218/306 (71%), Gaps = 9/306 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSS 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQF+ GN ICE EI+L KA+WSALFE Y FFE Y+NYLQVDI+A
Sbjct: 327 YNVSTSTLRVMMEQFRYGNSICE-----EIDLSKAQWSALFEPYLFFETYKNYLQVDIIA 381
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADADDLL WKGWVESRFRQLTLKIE+DT G+LQCHPYP +Y D SKPC + AFF GL RK
Sbjct: 382 ADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQRK 441
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E + QQFD +GTV FR+ I+ Y + G DIY S+V R+ LP+FVFPDG+K +P
Sbjct: 442 EGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKP 501
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPG 300
RH +Q C D+ QS +E+ KRK +HE +E K KQA IS Q P
Sbjct: 502 LRHEGQQVDTVCADMLQDQSGITEKGKKRKSDHEEEE----KEKKQALISPPAEQSPMPE 557
Query: 301 MTTEDP 306
DP
Sbjct: 558 FFGGDP 563
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 184/306 (60%), Positives = 220/306 (71%), Gaps = 8/306 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE +L F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN IC+ EIEL K WS+LF+ Y FFEAY+NYLQVD++A
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQ-----EIELNKQHWSSLFQQYMFFEAYKNYLQVDVLA 385
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R
Sbjct: 386 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRA 445
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +ECQQFD +GTV FR+ ++ Y R G D++ S+V RR LPSFVFP+GYK R
Sbjct: 446 DGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQ 505
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFIS---SEVPQPV 297
SRH ++Q +P ++ S S ER KRK + EI RP+K K+A S + P
Sbjct: 506 SRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPD 565
Query: 298 SPGMTT 303
S G+TT
Sbjct: 566 SSGITT 571
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 184/306 (60%), Positives = 220/306 (71%), Gaps = 8/306 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE +L F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN IC+ EIEL K WS+LF+ Y FFEAY+NYLQVD++A
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQ-----EIELNKQHWSSLFQQYMFFEAYKNYLQVDVLA 385
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R
Sbjct: 386 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRA 445
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +ECQQFD +GTV FR+ ++ Y R G D++ S+V RR LPSFVFP+GYK R
Sbjct: 446 DGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQ 505
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFIS---SEVPQPV 297
SRH ++Q +P ++ S S ER KRK + EI RP+K K+A S + P
Sbjct: 506 SRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPD 565
Query: 298 SPGMTT 303
S G+TT
Sbjct: 566 SSGITT 571
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 184/306 (60%), Positives = 220/306 (71%), Gaps = 8/306 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE +L F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN IC+ EIEL K WS+LF+ Y FFEAY+NYLQVD++A
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQ-----EIELNKQHWSSLFQQYMFFEAYKNYLQVDVLA 385
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R
Sbjct: 386 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRA 445
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +ECQQFD +GTV FR+ ++ Y R G D++ S+V RR LPSFVFP+GYK R
Sbjct: 446 DGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQ 505
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFIS---SEVPQPV 297
SRH ++Q +P ++ S S ER KRK + EI RP+K K+A S + P
Sbjct: 506 SRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPD 565
Query: 298 SPGMTT 303
S G+TT
Sbjct: 566 SSGITT 571
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 383
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 384 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 443
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 444 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 328 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 382
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 383 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 443 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 502
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 503 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 562
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 383
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 384 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 443
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 444 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 383
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 384 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 443
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 444 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 383
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 384 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 443
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 444 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 383
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 384 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 443
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 444 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 383
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 384 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 443
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 444 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 328 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 382
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 383 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 443 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 502
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 503 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 562
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 383
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 384 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 443
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 444 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN I + EIEL K WS+LFE Y FFEAY+NYLQVDIVA
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQ-----EIELNKQHWSSLFEQYMFFEAYKNYLQVDIVA 383
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADA+DLL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R
Sbjct: 384 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRA 443
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R
Sbjct: 444 EGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 241 SRHFNEQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
SRH N GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 182/305 (59%), Positives = 218/305 (71%), Gaps = 7/305 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+CPIE ELGFS+WDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 229 MLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNPRDRTHHMPIITPAYPCMNSS 288
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+ICE EIEL K +W+ LFE Y FFE+Y+NYLQVDIVA
Sbjct: 289 YNVSTSTLRVMMEQFQYGNKICE-----EIELIKTQWATLFEPYLFFESYKNYLQVDIVA 343
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D DDL WKGWVESR RQLTL I++DT G LQCHPYP++Y+D SKPC + AFF GL RK
Sbjct: 344 TDVDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 403
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR- 239
+ +E QQFD +GTV FR I+ Y + G +IY S+V R+ +PS+VFPDGY+ R
Sbjct: 404 QGEMIQEGQQFDIRGTVDEFRNSINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRARH 463
Query: 240 PSRHFNEQSGKP-CEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVS 298
P +QS K C D + SSER KRKK+ + +V+ D K+ IS + VS
Sbjct: 464 PRVTAQQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDVKNDMPEKRNSISPQRRDSVS 523
Query: 299 PGMTT 303
P + T
Sbjct: 524 PDIFT 528
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/314 (57%), Positives = 222/314 (70%), Gaps = 11/314 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQWRWP PVM+C IE ELGF VWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 250 MLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMNSS 309
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+IC+ EIE+ KA WSALFE + FFEAY+NYLQVDI+A
Sbjct: 310 YNVSTSTLRVMIEQFQFGNKICQ-----EIEMNKASWSALFEPFNFFEAYKNYLQVDIIA 364
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G LQCHPYP +Y DPS+ C + AFF GLSRK
Sbjct: 365 EDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRK 424
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RP
Sbjct: 425 EGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYKRPRP 484
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVSP 299
RH N Q D + S + QLKRK + I + P +SVK+A IS P+ SP
Sbjct: 485 QRHVNHQHQSDKNDPG---NGSPDSQLKRKHDSTGIDDTEPCQSVKRASISPGHPKTSSP 541
Query: 300 --GMTTEDPTNNSE 311
G +++P +NS+
Sbjct: 542 RSGNVSDEPISNSQ 555
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/264 (65%), Positives = 199/264 (75%), Gaps = 5/264 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSS 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQF+ GN ICE EI+L KA+WSALFE Y FFE Y+NYLQVDI+A
Sbjct: 327 YNVSTSTLRVMMEQFRYGNSICE-----EIDLSKAQWSALFEPYLFFETYKNYLQVDIIA 381
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADADDLL WKGWVESRFRQLTLKIE+DT G+LQCHPYP +Y D SKPC + AFF GL RK
Sbjct: 382 ADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQRK 441
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E + QQFD +GTV FR+ I+ Y + G DIY S+V R+ LP+FVFPDG+K +P
Sbjct: 442 EGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKP 501
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSE 264
RH +Q C D+ QS +E
Sbjct: 502 LRHEGQQVDTVCADMLQDQSGITE 525
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 224/325 (68%), Gaps = 11/325 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+IC+ EI++ KA WSALFE + FFEAY+NYLQVDI+A
Sbjct: 328 YNVSTSTLRVMMEQFQFGNKICQ-----EIDISKANWSALFEPFQFFEAYKNYLQVDIIA 382
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 383 EDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RP
Sbjct: 443 EGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRP 502
Query: 241 SRHFNEQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVS 298
SRH N DV+ + S + Q KRK + + + P +SVK+A IS + PV
Sbjct: 503 SRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVH 561
Query: 299 PGMTTEDPTNNSEVMS--SGGHLVS 321
T+ P+ N S SGG VS
Sbjct: 562 Q-KTSSPPSGNIADASGASGGSPVS 585
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 224/325 (68%), Gaps = 11/325 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 266 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 325
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+IC+ EI++ KA WSALFE + FFEAY+NYLQVDI+A
Sbjct: 326 YNVSTSTLRVMMEQFQFGNKICQ-----EIDISKANWSALFEPFQFFEAYKNYLQVDIIA 380
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 381 EDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 440
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RP
Sbjct: 441 EGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRP 500
Query: 241 SRHFNEQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVS 298
SRH N DV+ + S + Q KRK + + + P +SVK+A IS + PV
Sbjct: 501 SRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVH 559
Query: 299 PGMTTEDPTNNSEVMS--SGGHLVS 321
T+ P+ N S SGG VS
Sbjct: 560 Q-KTSSPPSGNIADASGASGGSPVS 583
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 224/325 (68%), Gaps = 11/325 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 266 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 325
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+IC+ EI++ KA WSALFE + FFEAY+NYLQVDI+A
Sbjct: 326 YNVSTSTLRVMMEQFQFGNKICQ-----EIDISKANWSALFEPFQFFEAYKNYLQVDIIA 380
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 381 EDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 440
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RP
Sbjct: 441 EGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRP 500
Query: 241 SRHFNEQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVS 298
SRH N DV+ + S + Q KRK + + + P +SVK+A IS + PV
Sbjct: 501 SRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVH 559
Query: 299 PGMTTEDPTNNSEVMS--SGGHLVS 321
T+ P+ N S SGG VS
Sbjct: 560 Q-KTSSPPSGNIADASGASGGSPVS 583
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/292 (59%), Positives = 204/292 (69%), Gaps = 12/292 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGFSVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSS 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ TL+VM EQFQ GN+ICE IEL A+W ALFE Y FFE+Y+NYLQVDIVA
Sbjct: 327 YNVSISTLRVMMEQFQYGNKICE-----GIELSNAQWGALFEPYLFFESYKNYLQVDIVA 381
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D DDL WKGWVESR RQLTL IE+DT G LQCHPYP++Y+D SK C + AFF GL RK
Sbjct: 382 VDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRK 441
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E QQFD +GTV FR I+ Y + G +IY S+V R+ +PS+VFP+GYK RP
Sbjct: 442 QGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRP 501
Query: 241 SRHFNEQSGKPCEDVKMC------QSCSSERQLKR-KKEHEIKEVRPDKSVK 285
R N+Q G ++ S S E R K E + PDKS K
Sbjct: 502 QRPVNQQQGDEASAKRLTISPQRQDSVSPEIISHRWMKADEKGNIEPDKSDK 553
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 224/325 (68%), Gaps = 11/325 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+IC+ EI++ KA WSALFE + FFEAY+NYLQVDI+A
Sbjct: 328 YNVSTSTLRVMMEQFQFGNKICQ-----EIDISKANWSALFEPFQFFEAYKNYLQVDIIA 382
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 383 EDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RP
Sbjct: 443 EGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRP 502
Query: 241 SRHFNEQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVS 298
SRH N DV+ + S + Q KRK + + + P +SVK+A IS + PV
Sbjct: 503 SRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVH 561
Query: 299 PGMTTEDPTNNSEVMS--SGGHLVS 321
T+ P+ N S SGG VS
Sbjct: 562 Q-KTSSPPSGNIADASGASGGSPVS 585
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 224/325 (68%), Gaps = 11/325 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+IC+ EI++ KA WSALFE + FFEAY+NYLQVDI+A
Sbjct: 328 YNVSTSTLRVMMEQFQFGNKICQ-----EIDISKANWSALFEPFQFFEAYKNYLQVDIIA 382
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 383 EDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RP
Sbjct: 443 EGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRP 502
Query: 241 SRHFNEQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVS 298
SRH N DV+ + S + Q KRK + + + P +SVK+A IS + PV
Sbjct: 503 SRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVH 561
Query: 299 PGMTTEDPTNNSEVMS--SGGHLVS 321
T+ P+ N S SGG VS
Sbjct: 562 Q-KTSSPPSGNIADASGASGGSPVS 585
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 218/325 (67%), Gaps = 13/325 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQWRWPNPVM+C IE ELGF VWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 250 MLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMNSS 309
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+IC+ EIEL KA W ALFE + FFEAY+NYLQVDI+A
Sbjct: 310 YNVSTSTLRVMIEQFQFGNKICQ-----EIELNKANWPALFESFQFFEAYKNYLQVDIIA 364
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G LQCHPYP +Y DPS+ C + AFF GLSR
Sbjct: 365 EDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRN 424
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GY+ RP
Sbjct: 425 VGVKIEEGQQFDIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYRRPRP 484
Query: 241 SRHFNEQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVP---- 294
RH + Q D + S + QLKRK + + P +SVK+A +S P
Sbjct: 485 QRHVSHQQQSDKNDTENGNMTGSPDGQLKRKHDSAGTDDTEPCRSVKRASRASVSPVHPT 544
Query: 295 --QPVSPGMTTEDPTNNSEVMSSGG 317
P S ++ E NN + MSS
Sbjct: 545 TSSPSSGNISDEATCNNQKKMSSNA 569
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 202/273 (73%), Gaps = 8/273 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GNRIC+ EIE+ K W ALFE + FFEAY+NYLQVDI+A
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQ-----EIEMNKTSWPALFEPFQFFEAYKNYLQVDIIA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 374 EDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 433
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RP
Sbjct: 434 EGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRP 493
Query: 241 SRHFNEQSGK-PCEDVKMCQSCSSERQLKRKKE 272
SRH N QS K ED +S S QLKRK +
Sbjct: 494 SRHVNHQSDKNDTEDGTATRSPDS--QLKRKHD 524
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 202/273 (73%), Gaps = 8/273 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GNRIC+ EIE+ K W ALFE + FFEAY+NYLQVDI+A
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQ-----EIEMNKTSWPALFEPFQFFEAYKNYLQVDIIA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 374 EDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 433
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RP
Sbjct: 434 EGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRP 493
Query: 241 SRHFNEQSGK-PCEDVKMCQSCSSERQLKRKKE 272
SRH N QS K ED +S S QLKRK +
Sbjct: 494 SRHVNHQSDKNDTEDGTATRSPDS--QLKRKHD 524
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 202/273 (73%), Gaps = 8/273 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GNRIC+ EIE+ K W ALFE + FFEAY+NYLQVDI+A
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQ-----EIEMNKTSWPALFEPFQFFEAYKNYLQVDIIA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 374 EDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 433
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RP
Sbjct: 434 EGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRP 493
Query: 241 SRHFNEQSGK-PCEDVKMCQSCSSERQLKRKKE 272
SRH N QS K ED +S S QLKRK +
Sbjct: 494 SRHVNHQSDKNDTEDGTATRSPDS--QLKRKHD 524
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 202/273 (73%), Gaps = 8/273 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GNRIC+ EIE+ K W ALFE + FFEAY+NYLQVDI+A
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQ-----EIEMNKTSWPALFEPFQFFEAYKNYLQVDIIA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 374 EDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 433
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RP
Sbjct: 434 EGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRP 493
Query: 241 SRHFNEQSGK-PCEDVKMCQSCSSERQLKRKKE 272
SRH N QS K ED +S S QLKRK +
Sbjct: 494 SRHVNHQSDKNDTEDGTATRSPDS--QLKRKHD 524
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 202/273 (73%), Gaps = 8/273 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GNRIC+ EIE+ K W ALFE + FFEAY+NYLQVDI+A
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQ-----EIEMNKTSWPALFEPFQFFEAYKNYLQVDIIA 115
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 116 EDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 175
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RP
Sbjct: 176 EGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRP 235
Query: 241 SRHFNEQSGK-PCEDVKMCQSCSSERQLKRKKE 272
SRH N QS K ED +S S QLKRK +
Sbjct: 236 SRHVNHQSDKNDTEDGTATRSPDS--QLKRKHD 266
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 343 bits (879), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 176/311 (56%), Positives = 215/311 (69%), Gaps = 5/311 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVYT WRWPNPVM+C IE +LG SVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 274 MLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSS 333
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN++CE EIEL KA+WS+LFE Y FFE+Y+NYLQVDIVA
Sbjct: 334 YNVSTSTLRVMMEQFQFGNKVCE-----EIELNKAQWSSLFEPYLFFESYKNYLQVDIVA 388
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADADDL +WKGWVESRFR LTL IE+ T G LQCHPYP++Y+D SKPC + AFF GL RK
Sbjct: 389 ADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 448
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E QQFD + +V F+ +Y + G +I+ S+V RR +P FVFP+G+K R
Sbjct: 449 QGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRA 508
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPG 300
SR Q EDV+ +S S ER LKRK + E + K+ IS VS
Sbjct: 509 SRLSALQRSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQKRQSISPRRQDSVSSN 568
Query: 301 MTTEDPTNNSE 311
++ T +SE
Sbjct: 569 ISNFSNTASSE 579
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/311 (56%), Positives = 215/311 (69%), Gaps = 5/311 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVYT WRWPNPVM+C IE +LG SVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 288 MLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSS 347
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN++CE EIEL KA+WS+LFE Y FFE+Y+NYLQVDIVA
Sbjct: 348 YNVSTSTLRVMMEQFQFGNKVCE-----EIELNKAQWSSLFEPYLFFESYKNYLQVDIVA 402
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADADDL +WKGWVESRFR LTL IE+ T G LQCHPYP++Y+D SKPC + AFF GL RK
Sbjct: 403 ADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK 462
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E QQFD + +V F+ +Y + G +I+ S+V RR +P FVFP+G+K R
Sbjct: 463 QGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRA 522
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPG 300
SR Q EDV+ +S S ER LKRK + E + K+ IS VS
Sbjct: 523 SRLSALQRSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQKRQSISPRRQDSVSSN 582
Query: 301 MTTEDPTNNSE 311
++ T +SE
Sbjct: 583 ISNFSNTASSE 593
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 225/331 (67%), Gaps = 28/331 (8%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQWRWPNPVM+ I+ ELGF VWDPRKNP+DR+H MPIITPAY MNSS
Sbjct: 268 MLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHMPIITPAYPGMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTEQFQ GN++CE +IE+ KA WSALF+ YPFFEAY+NYLQVDIVA
Sbjct: 328 YNVSTSTLRVMTEQFQQGNKMCE-----DIEMNKANWSALFDPYPFFEAYKNYLQVDIVA 382
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
AD DDL WKGWVESR RQLTLKIE+DT G+LQCHPYP +Y+D SK CP+ AFF GL RK
Sbjct: 383 ADQDDLRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSKQCPHCAFFMGLQRK 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E QQFD +GTV FR+ + Y + G DIY S+V R+ +PS+VFP+G + R
Sbjct: 443 QGVLIQEGQQFDIRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQIPSYVFPEGVRRVRS 502
Query: 241 SRHFN----------EQSGKPC------EDVKMCQSCSSERQLKRKKEHEIKEVRPDKSV 284
R N E S K C + V+ C + S+E+ KRK H++ K+
Sbjct: 503 GRAANQIGKTSPQGRESSPKCCNGNFGDDIVEECNANSAEKANKRK--HDMT-TDVGKAE 559
Query: 285 KQAFISSEVPQPV-SPGMTTEDPTNNSEVMS 314
K+A +S P V S ++ D +N S + S
Sbjct: 560 KRAAVS---PNDVKSASLSVSDVSNRSGLAS 587
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/298 (56%), Positives = 206/298 (69%), Gaps = 9/298 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGFSVW P +NP+DRSH MPIITPAY CMNSS
Sbjct: 180 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSS 239
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+ICE +IEL K WSALF Y FFE Y+N+LQ+D+VA
Sbjct: 240 YNVSASTLRVMMEQFQYGNKICE-----DIELNKVGWSALFVPYVFFEGYKNFLQIDVVA 294
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
AD DDL WKGWVESR RQLTL IE+DT G LQCHPYP +YID ++ C +SAFF GL RK
Sbjct: 295 ADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQRK 354
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E QQFD +GTV+ FR I+ Y + G DI+ S++ RR +P +VFPDG+K RP
Sbjct: 355 QGEVVQEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRP 414
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQ----AFISSEVP 294
SR +P + S + R K++++ K V+ D +K+ F+ S P
Sbjct: 415 SRSTVPVENRPKSLQENEVSGTELRGRNIKRKYDDKGVKQDVVLKKHCANPFVESLTP 472
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 323 bits (827), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 172/311 (55%), Positives = 208/311 (66%), Gaps = 17/311 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE +LGFS+WDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+V+ EQFQ GN++C+ EIEL KA W+ALFE + FFEAY +L VDIVA
Sbjct: 328 YNVSTSTLRVIMEQFQFGNKVCQ-----EIELNKANWNALFEPFHFFEAYRKFLVVDIVA 382
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D DDL WKGW+ESR RQLTLKIE+DT G+LQCHPYP +Y DP+ C + AF+ GLSRK
Sbjct: 383 EDDDDLRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRK 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E G K QQFD +GTV F R I Y + + G D+ ++V R +PS+VF GYK P
Sbjct: 443 E-GLKKRGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCP 501
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIK-EVRPDKSVKQAFISSEVPQPVSP 299
+ H N+Q D S E QLKRK + V KSVK+A +S P
Sbjct: 502 TMHANQQEQS---DGDGTFSPYLESQLKRKYISDGDGHVDLCKSVKRASVS-------PP 551
Query: 300 GMTTEDPTNNS 310
G+ T NS
Sbjct: 552 GVGTPPHLGNS 562
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 203/291 (69%), Gaps = 10/291 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE +LGFS+WDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+V+ EQFQ GN+IC+ EIEL KA W+ALFE + FFEAY +L VDIVA
Sbjct: 328 YNVSSSTLRVIMEQFQFGNKICQ-----EIELNKANWNALFEPFHFFEAYRKFLVVDIVA 382
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGW+ESR RQLTLKI++DT G+LQCHPYP +Y DP+ C + AF+ GLSRK
Sbjct: 383 ENDDDLRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRK 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E G+ K QQFD +GTV F R I Y + G D+ ++V R +PS+VF GYK P
Sbjct: 443 E-GSKKRGQQFDIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQVPSYVFEQGYKKPCP 501
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIK-EVRPDKSVKQAFIS 290
+ H N+Q D + S + QLKRK + + V KSVK A +S
Sbjct: 502 TMHANQQEQS---DGDVTLSPYLDSQLKRKYDSDGDGHVELHKSVKWASVS 549
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 151/242 (62%), Positives = 184/242 (76%), Gaps = 5/242 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPRKNP+DR+H+MPIITPAY CMNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCMNSS 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM E+F N ICEV IE+ KAEWSALFE Y FF+AY+NYLQ+D+ A
Sbjct: 318 YNVSSSTLRVMVEEFSRANGICEV-----IEMNKAEWSALFEPYAFFDAYKNYLQIDVFA 372
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
AD DDL WKGWVESR RQLTLKIE+ T G+LQCHP+P ++D SK + AFF GL ++
Sbjct: 373 ADNDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFMGLQKR 432
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ S+E QQFD + TV+ FR+ + Y++ +EG DI S+V RR +P++VFP G K RP
Sbjct: 433 QGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFPGGTKPARP 492
Query: 241 SR 242
+
Sbjct: 493 PK 494
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/289 (58%), Positives = 208/289 (71%), Gaps = 7/289 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWP PVM+CPIE +LGF VW P KNP+DRSH MPIITPAY CMNSS
Sbjct: 262 MLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPIITPAYPCMNSS 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ TL+VM EQFQ GN+IC EIEL K W ALFE Y FFE+Y+NYLQVD+VA
Sbjct: 322 YNVSMSTLRVMMEQFQYGNKICG-----EIELSKDCWKALFEKYSFFESYKNYLQVDVVA 376
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADADDL +WKGWVESR RQLTL IE+DT G LQCHPY ++++D S+ C + AFF GL RK
Sbjct: 377 ADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCAFFMGLHRK 436
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
E +E QQFD +GTV+ FR ++ Y + G +IY S+V RR +P +VFPDGYK RP
Sbjct: 437 EGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPCYVFPDGYKRSRP 496
Query: 241 SRHFNE-QSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAF 288
SR ++ ++ K + ++ + ER KRK + +VR D VK+ +
Sbjct: 497 SRPTSQFENCKSFHNNEVSVTEHVERIRKRKNNDGV-DVREDAIVKRQY 544
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 152/266 (57%), Positives = 191/266 (71%), Gaps = 11/266 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPRKNP+DR+H+MPIITPAY CMNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCMNSS 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM E+F N ICEV IE+ KAEWSALFE Y FF+AY+NYLQ+D+ A
Sbjct: 318 YNVSSSTLRVMVEEFSRANGICEV-----IEMNKAEWSALFEPYAFFDAYKNYLQIDVFA 372
Query: 121 ADADDLLTWKGWVESRFRQLTLK------IEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF 174
AD DDL WKGWVESR RQLTLK IE+ T G+LQCHP+P ++D SK + AFF
Sbjct: 373 ADNDDLRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCDFVDESKEGKHCAFF 432
Query: 175 WGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
GL +++ S+E QQFD + TV+ FR+ + Y++ +EG DI S+V RR +P++VFP G
Sbjct: 433 MGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFPGG 492
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQS 260
K RP + + + + ++ C +
Sbjct: 493 TKPARPPKLSSSRKAREAGSIRGCNT 518
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/324 (53%), Positives = 216/324 (66%), Gaps = 31/324 (9%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWP PVM+CPIE ELGF VW P KNP+DRSH MPIITPAY CMNSS
Sbjct: 262 MLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPIITPAYPCMNSS 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM +QFQ GN+IC EIEL +A W ALFE Y FFE+Y+NYLQVD+VA
Sbjct: 322 YNVSTSTLRVMMDQFQYGNKICG-----EIELSRACWKALFEQYSFFESYKNYLQVDVVA 376
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADADDL +WKGWVESR RQLTL IE+DT G LQCHPY ++++D S+ C + AFF GL RK
Sbjct: 377 ADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRLCAHCAFFMGLQRK 436
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E QQFD +GTV+ FR ++ Y + G +IY S+V RR +P +V PDGYK R
Sbjct: 437 QGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPFYVVPDGYKRSRL 496
Query: 241 SRHFNEQSGKPCEDVKMCQSCSSE-------RQLKRKKEHEIKEVRPDKSVKQAFISSEV 293
SR P V+ C+S +E +++++K ++ +VR D VK+
Sbjct: 497 SR--------PTSQVENCKSFHNEVSGTEHVERIRKRKNNDGVDVRGDAIVKR------- 541
Query: 294 PQPVSPGMTTEDPTNNSEVMSSGG 317
Q SP +ED + +GG
Sbjct: 542 -QSASP---SEDRLARHSSLGTGG 561
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/242 (57%), Positives = 175/242 (72%), Gaps = 6/242 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQWRWPNPVM+C E G LG VWDPR+NPKDR H MPIITPAY CMNSS
Sbjct: 264 MLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCMNSS 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL++MTE+F+ G+ ICEV +E K++W LFE YPFFEAY+NYLQ+DI A
Sbjct: 324 YNVSASTLRIMTEEFRRGHDICEV-----MEENKSDWDTLFEPYPFFEAYKNYLQIDITA 378
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DD+ WKGWVESR RQLTLKIE+ T +LQCHPYP + D S+P + +F GL RK
Sbjct: 379 ENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRPF-HHCYFMGLQRK 437
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ G + +QFD + TV F+ ++ Y R+ G +IY S+V RR +P+FVFP G + R
Sbjct: 438 QGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSIPNFVFPGGVRPSRA 497
Query: 241 SR 242
S+
Sbjct: 498 SK 499
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 141/252 (55%), Positives = 185/252 (73%), Gaps = 8/252 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPR+NPKDR H MPIITPAY CMNS+
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPCMNST 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y V+ TL+VM+++F+ G+ ICE +E KA+W LFE YPFFE+Y+NYLQ+DI A
Sbjct: 324 YNVTSSTLRVMSDEFRRGSEICEA-----MEASKADWDTLFEPYPFFESYKNYLQIDITA 378
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ADDL WKGWVESR RQLTLKIE+ T G+LQCHP+P ++ D S+P + +F GL RK
Sbjct: 379 ENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPF-HHCYFMGLQRK 437
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ E +QFD + TV+ F+ ++ Y + + G +I+ S+V RR++P+++FP G + P
Sbjct: 438 QGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPGGVRPTFP 497
Query: 241 SR--HFNEQSGK 250
S+ N+QS K
Sbjct: 498 SKVTAENKQSSK 509
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 175/242 (72%), Gaps = 6/242 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPR+NP+DR H MPIITPAY CMNS+
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYPCMNST 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y V+ TL++M+++F+ G ICE +E KA+W LFE YPFFEAY+NYLQ+DI A
Sbjct: 324 YNVTTSTLRIMSDEFKRGTEICEA-----MEASKADWDTLFEPYPFFEAYKNYLQIDITA 378
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWVESR RQLTLKIE+ T G+LQCHPYP ++ D S+ + +F GL RK
Sbjct: 379 ENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSF-HQCYFMGLQRK 437
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ E +QFD + TV+ F+ ++ Y + G DI S+V RR++P+F+FP G + P
Sbjct: 438 QGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPNFIFPGGVRPSVP 497
Query: 241 SR 242
SR
Sbjct: 498 SR 499
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/251 (56%), Positives = 179/251 (71%), Gaps = 7/251 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLV RFFRVYTQWRWPNPVM+C IE G LG VWDPRKNP+DR H+MPIITPAY CMNSS
Sbjct: 264 MLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQMPIITPAYPCMNSS 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VMTE+FQ N+ICE E+EL K W+ LFE YPFFEAY+NYL++DI A
Sbjct: 324 YNVSSSTLRVMTEEFQRSNQICE-----ELELNKVCWNILFETYPFFEAYKNYLEIDISA 378
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
ADDL WKGW ESR R LTLKIE+ T G+LQCHP+P+ + DP +P + FF GL RK
Sbjct: 379 EGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQRPY-HCCFFMGLQRK 437
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E +QFD + TV FR + Y + ++G +I S++ RR++P FVFP G + R
Sbjct: 438 QGMPIQEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNIPLFVFPGGVRPPRT 497
Query: 241 SRHFNEQSGKP 251
++ +G+P
Sbjct: 498 TKMLG-TAGRP 507
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 178/242 (73%), Gaps = 6/242 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPR+NPKDR H MPIITPAY MNSS
Sbjct: 266 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPSMNSS 325
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL++M+E+FQ GN ICE +E KA+W+ LFE + FF+AY+NYLQ+DI A
Sbjct: 326 YNVSASTLRIMSEEFQRGNEICEA-----MEASKADWNTLFESFSFFDAYKNYLQIDIGA 380
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWVESR RQLTLKIE+ T +LQCHP+P ++ D S+P + ++F GL RK
Sbjct: 381 ENEDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRPL-HCSYFMGLQRK 439
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ + E +QFD + TV+ F+ ++ Y + G +I+ ++V RR++PSFVFP G + RP
Sbjct: 440 QGVPANEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNIPSFVFPGGIRPSRP 499
Query: 241 SR 242
S+
Sbjct: 500 SK 501
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 178/242 (73%), Gaps = 6/242 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C I+ G LG VWDPR+NPKD+ H MPIITPAY CMNSS
Sbjct: 294 MLVSRFFRVYTQWRWPNPVMLCTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 353
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VSL TL+VMTE+FQ G+ ICE +E KA+W LFE YPFFE+Y+NYL++DI A
Sbjct: 354 YNVSLSTLRVMTEEFQRGDEICEA-----MEANKADWDTLFEPYPFFESYKNYLRIDISA 408
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWV+SR RQLTLKIE++T G+LQCHP+P + D S+P + ++F GL RK
Sbjct: 409 ENVDDLRNWKGWVKSRLRQLTLKIERNTYGMLQCHPHPGDFSDKSRPL-HCSYFMGLQRK 467
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ + E QFD + TV+ F+ ++ Y + G +I S+V RR++P+FVFP G + P
Sbjct: 468 QGVPANEGGQFDMRLTVEEFKHSVNAYTQWKPGMNISISHVKRRNIPAFVFPGGVRPKCP 527
Query: 241 SR 242
S+
Sbjct: 528 SK 529
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 185/263 (70%), Gaps = 8/263 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPR+NPKDR H MPIITPAY MNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPSMNSS 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL++MTE+FQ GN ICE +E+ KAEW LFE + FFEAY+NYLQ+DI A
Sbjct: 318 YNVSSSTLRIMTEEFQRGNEICEA-----MEVSKAEWDTLFEPFSFFEAYKNYLQIDISA 372
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWVESR RQLTLKIE+ T +LQCHP+P ++ D S+P + ++F GL RK
Sbjct: 373 ENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKSRPL-HCSYFMGLQRK 431
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ E +QFD + TV F+ ++ Y + + G +I ++V +R++P+FVFP G + RP
Sbjct: 432 QGVPVNEGEQFDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKKRNIPNFVFPSGVRPSRP 491
Query: 241 SRHFNEQSGKPCEDVKMCQSCSS 263
S+ G+ + K+ + S+
Sbjct: 492 SKA--TWDGRRSSEAKVANNSSA 512
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/297 (54%), Positives = 201/297 (67%), Gaps = 15/297 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE-LGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFFRV+TQW+WPNPVM+C IE + LGF+VWDPRKNP+DRSH MPIITPAY CMNS
Sbjct: 270 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 329
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
SY VS TL+V+ EQFQ GN+IC+ EIEL KA WS+LFE + FFEAY YL VDIV
Sbjct: 330 SYNVSTSTLRVIMEQFQFGNKICQ-----EIELNKASWSSLFEPFQFFEAYTRYLVVDIV 384
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A D DDL WKGW+ESR RQLTLKIE+DT G+LQCHP P +Y DPS C + AF+ GLSR
Sbjct: 385 ADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSR 444
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 239
KE G Q+FD +GTV F I Y + G D+ ++VC++ +P +VF G + R
Sbjct: 445 KE-GMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKEIPLYVFEQGCQKTR 503
Query: 240 PSRHF----NEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPD--KSVKQAFIS 290
P +QS K D ++C + +S ++K H + D KSV++A +S
Sbjct: 504 PPTPICAEQQDQSDK--NDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVS 558
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/276 (53%), Positives = 190/276 (68%), Gaps = 9/276 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPRK PKDR H MPIITPAY CMNSS
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSS 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL++M+E+F+ GN I EV +E KA+W+ L E YPFFEAY+NYLQ++I A
Sbjct: 324 YNVSSSTLRIMSEEFKRGNEISEV-----MEANKADWATLCEPYPFFEAYKNYLQIEIAA 378
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ADDL WKGWVESR RQLTLKIE+ T +LQCHP+P + D S+P + +F GL RK
Sbjct: 379 ENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFMGLQRK 437
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ + E +QFD + TV F+ + Y + + G +I+ +V RR++P+FVFP G + RP
Sbjct: 438 QGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRP 497
Query: 241 SRHFNEQSGKPCEDVKMCQSC--SSERQLKRKKEHE 274
++ +E+ + E Q+ +E KRK+E E
Sbjct: 498 TKVASERR-RVLEPNVSTQAVLEGAEDSKKRKREDE 532
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/261 (54%), Positives = 181/261 (69%), Gaps = 10/261 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE-MGELGF-SVWDPRKNPKDRSHRMPIITPAYHCMNS 59
L+SRFFRVYTQWRWPNPVM+CPIE LG VWDPRKNP+D+SH MPIITPAY CMNS
Sbjct: 247 LISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPCMNS 306
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
SY VS TL++MT++F GN +CE ++E+ +A W LFE + FFEAY NYLQ+D+V
Sbjct: 307 SYNVSTSTLRIMTQEFNRGNEVCE-----QLEMSRATWDLLFESFSFFEAYRNYLQIDVV 361
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A D D WKGWVESR RQLTLK+E+DT G+LQCHP+P+ ++D ++ + A+F GL R
Sbjct: 362 AIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQR 421
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 239
K E QQFD + TV+ F+ + Y ++G +IY S+V R+ +P FV+P G K R
Sbjct: 422 KLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRKQIPLFVYPGGVKPAR 481
Query: 240 PSRHFNEQSGKPCEDVKMCQS 260
P+R + SG P D K S
Sbjct: 482 PAR---QHSGSPSSDSKQGDS 499
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/252 (54%), Positives = 181/252 (71%), Gaps = 8/252 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPR+NPKDR H MPIITP Y CMNS+
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPVYPCMNST 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y V+ TL+VM+++F+ G+ ICE +E KA+W LFE YPFFE+Y+NYLQ+DI A
Sbjct: 324 YNVTSSTLRVMSDEFRRGSEICEA-----MEASKADWDTLFEPYPFFESYKNYLQIDITA 378
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ADDL WKGWV SR RQLTLKIE+ T G+LQCHP+P ++ D S+P + +F GL RK
Sbjct: 379 ENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPF-HHCYFMGLQRK 437
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ E +QFD + TV+ F+ ++ Y + + G DI+ S+V R ++P+++FP G + P
Sbjct: 438 QGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNIPNYIFPGGVRPTFP 497
Query: 241 SR--HFNEQSGK 250
S+ N+QS K
Sbjct: 498 SKVTAENKQSSK 509
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/261 (54%), Positives = 180/261 (68%), Gaps = 10/261 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE-MGELGF-SVWDPRKNPKDRSHRMPIITPAYHCMNS 59
LVSRFFRVYTQWRWPNPVM+CPIE LG VWDPRKNP+D+SH MPIITPAY CMNS
Sbjct: 247 LVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPCMNS 306
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
SY VS TL++MT++F GN +CE ++E+ +A W LFE + FFEAY NYLQ+D+V
Sbjct: 307 SYNVSTSTLRIMTQEFNRGNEVCE-----QLEMSRATWDLLFESFSFFEAYRNYLQIDVV 361
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A D D WKGWVESR RQLTLK+E+DT G+LQCHP+P+ ++D ++ + A+F GL R
Sbjct: 362 AIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQR 421
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 239
K E QQFD + TV+ F+ + Y + G +IY S+V R+ +P FV+P G K R
Sbjct: 422 KLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRKQIPLFVYPGGVKPAR 481
Query: 240 PSRHFNEQSGKPCEDVKMCQS 260
P+R + SG P D K S
Sbjct: 482 PAR---QHSGSPSSDSKQGDS 499
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/276 (53%), Positives = 189/276 (68%), Gaps = 9/276 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPRK PKDR H MPIITPAY CMNSS
Sbjct: 444 MLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSS 503
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL++M+E+F+ GN I EV +E KA+W L E YPFFEAY+NYLQ++I A
Sbjct: 504 YNVSSSTLRIMSEEFKRGNEISEV-----MEANKADWXTLCEPYPFFEAYKNYLQIEIAA 558
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ADDL WKGWVESR RQLTLKIE+ T +LQCHP+P + D S+P + +F GL RK
Sbjct: 559 ENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFMGLQRK 617
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ + E +QFD + TV F+ + Y + + G +I+ +V RR++P+FVFP G + RP
Sbjct: 618 QGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRP 677
Query: 241 SRHFNEQSGKPCEDVKMCQSC--SSERQLKRKKEHE 274
++ +E+ + E Q+ +E KRK+E E
Sbjct: 678 TKVASERR-RVLEPNVSTQAVLEGAEDSKKRKREDE 712
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 172/237 (72%), Gaps = 6/237 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPRK PKDR H MPIITPAY CMNSS
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSS 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL++M+E+F+ GN I EV +E KA+W+ L E YPFFEAY+NYLQ++I A
Sbjct: 324 YNVSSSTLRIMSEEFKRGNEISEV-----MEANKADWATLCEPYPFFEAYKNYLQIEIAA 378
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ADDL WKGWVESR RQLTLKIE+ T +LQCHP+P + D S+P + +F GL RK
Sbjct: 379 ENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFMGLQRK 437
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKW 237
+ + E +QFD + TV F+ + Y + + G +I+ +V RR++P+FVFP GY +
Sbjct: 438 QGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGYGY 494
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 200/297 (67%), Gaps = 15/297 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE-LGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFFRV+TQW+WPNPVM+C IE + LGF+VWDPRKNP+DRSH MPIITPAY CMNS
Sbjct: 271 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 330
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
SY VS TL+V+ EQFQ GN+IC+ EIEL KA WS+LFE + FFEAY YL VDIV
Sbjct: 331 SYNVSTSTLRVIMEQFQFGNKICQ-----EIELNKASWSSLFEPFQFFEAYTRYLVVDIV 385
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A D DDL WKGW+ESR RQLTLKIE+DT G+LQCHP P +Y DPS C + AF+ GLSR
Sbjct: 386 ADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSR 445
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 239
KE G Q+FD +GTV F I Y + G D+ ++V ++ +P +VF G + R
Sbjct: 446 KE-GMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 504
Query: 240 PSRHF----NEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPD--KSVKQAFIS 290
P +QS K D ++C + +S ++K H + D KSV++A +S
Sbjct: 505 PPTPICAEQQDQSDK--NDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVS 559
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 200/297 (67%), Gaps = 15/297 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE-LGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFFRV+TQW+WPNPVM+C IE + LGF+VWDPRKNP+DRSH MPIITPAY CMNS
Sbjct: 263 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 322
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
SY VS TL+V+ EQFQ GN+IC+ EIEL KA WS+LFE + FFEAY YL VDIV
Sbjct: 323 SYNVSTSTLRVIMEQFQFGNKICQ-----EIELNKASWSSLFEPFQFFEAYTRYLVVDIV 377
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A D DDL WKGW+ESR RQLTLKIE+DT G+LQCHP P +Y DPS C + AF+ GLSR
Sbjct: 378 ADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSR 437
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 239
KE G Q+FD +GTV F I Y + G D+ ++V ++ +P +VF G + R
Sbjct: 438 KE-GMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 496
Query: 240 PSRHF----NEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPD--KSVKQAFIS 290
P +QS K D ++C + +S ++K H + D KSV++A +S
Sbjct: 497 PPTPICAEQQDQSDK--NDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVS 551
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/297 (54%), Positives = 202/297 (68%), Gaps = 15/297 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE-LGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFFRV+TQW+WPNPVM+C IE + LGF+VWDPRKNP+DRSH MPIITPAY CMNS
Sbjct: 239 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 298
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
SY VS TL+V+ EQFQ GN+IC+ EIEL KA WS+LFE + FFEAY YL VDIV
Sbjct: 299 SYNVSTSTLRVIMEQFQFGNKICQ-----EIELNKASWSSLFEPFQFFEAYTRYLVVDIV 353
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A D DDL WKGW+ESR RQLTLKIE+DT G+LQCHP P +Y DPS C + AF+ GLSR
Sbjct: 354 ADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSR 413
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 239
KE G Q+FD +GTV F I Y + G D+ ++V ++ +P +VF G + R
Sbjct: 414 KE-GMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 472
Query: 240 PSRHF----NEQSGKPCEDVKMCQSCSS-ERQLKRKKEH-EIKEVRPDKSVKQAFIS 290
P ++SGK D ++C + S QLKRK + +V KSV++A +S
Sbjct: 473 PPTPICAEQQDRSGK--NDSEVCTTTVSLVGQLKRKYDSVGGADVDSFKSVRRASVS 527
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/181 (71%), Positives = 149/181 (82%), Gaps = 5/181 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE E+GF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+VM EQFQ GN+IC+ EIE+ KA WSALFE + FFEAY+NYLQVDI+A
Sbjct: 319 YNVSTSTLRVMVEQFQFGNKICQ-----EIEMNKASWSALFEPFQFFEAYKNYLQVDIIA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRK
Sbjct: 374 EDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRK 433
Query: 181 E 181
E
Sbjct: 434 E 434
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/236 (54%), Positives = 168/236 (71%), Gaps = 6/236 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML SRFFRVY QWRWPNPV++C ++ G G VWDPR+NPKDR H MPIITPAY CMNSS
Sbjct: 259 MLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL++MT +FQ G ICE +E KA+W LFE + FFEAY+NYLQ+DI A
Sbjct: 319 YNVSASTLRIMTGEFQRGKEICEA-----MEANKADWDTLFEPFAFFEAYKNYLQIDISA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
A+ +DL WKGWVESR RQLTLKIE+ T +LQCHP+P+ + D S+P + ++F GL RK
Sbjct: 374 ANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRPL-HCSYFMGLQRK 432
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 236
+ + E +QFD + TV+ F+ ++ Y + G +I S++ RR LP++VFP G +
Sbjct: 433 QGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPNYVFPGGVR 488
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/291 (48%), Positives = 187/291 (64%), Gaps = 17/291 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVY++W+WPNPVM+C IE G LG VWDPR+N +DR H+MPIITPAY CMNSS
Sbjct: 259 MLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ T VM ++F IC+ I+ GKA+W ALFE YPFFE+Y+NYL+V+I A
Sbjct: 319 YNVSVSTRYVMVQEFTQAFEICQA-----IDEGKADWDALFEPYPFFESYKNYLEVNITA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWVESR R L LKIE+ ++ ++ HPYP + D S+P + +F GL RK
Sbjct: 374 RNEDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL-HIFYFMGLWRK 432
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ ++E +QFD +G V F+ I Y+ R+EG DI S+V R+ +P FVFP G + R
Sbjct: 433 QTTQAQETEQFDIRGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEIPLFVFPGGVRPSRT 492
Query: 241 SRHFNEQS-GKPCEDVKM---------CQSCSSERQLKRKKEHEIKEVRPD 281
SR ++ S P DV SCS + + K + +K+ PD
Sbjct: 493 SRTTHKNSRAIPTRDVSADDQVGNLLGVASCSDAQHVPCKGSY-MKQPEPD 542
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/266 (54%), Positives = 176/266 (66%), Gaps = 29/266 (10%)
Query: 89 EIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDT 148
+IEL K +WSALFE Y FFEAY+NYLQVDIVAADA DLL WKGWVESR RQLTLKIE+DT
Sbjct: 210 KIELNKEQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDT 269
Query: 149 NGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYR 208
+G+LQCHPYPN+YIDPSK C + AFF GL RKE T +E QQFD +GTV FR+ I+ Y
Sbjct: 270 DGMLQCHPYPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYL 329
Query: 209 VRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLK 268
+ G DIY S+V RR LP FVFPDGYK RPSRH N+Q+ + EDV QS S+ER +K
Sbjct: 330 PWKPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAERHVK 389
Query: 269 RKKEHEIKEVRPDKSVKQAFISSEVPQPVSP-------GMTT------------------ 303
RK + E+ +++P K K+A S + Q VSP GMT+
Sbjct: 390 RKNDCEMADLKPVKPEKRASTSPQRLQSVSPSSSAGRSGMTSLASSCEGVILGCSTIGDI 449
Query: 304 ----EDPTNNSEVMSSGGHLVSEKGE 325
ED +NSEV S+ L SEK +
Sbjct: 450 VSNCEDVASNSEVRSTSWQLESEKSD 475
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 138/291 (47%), Positives = 190/291 (65%), Gaps = 17/291 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVY++W+WPNPVM+C IE G LG VWDPR+N +DR H+MPIITPAY CMNSS
Sbjct: 259 MLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ T VMT++F IC+ I+ GKA+W ALFE YPFFE+Y+NYL+V+I A
Sbjct: 319 YNVSVSTRYVMTQEFTRAFEICQA-----IDEGKADWDALFEPYPFFESYKNYLEVNITA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ D+L +WKGWVESR R L LKIE+ ++ ++ HPYP + D S+P + +F GL RK
Sbjct: 374 RNEDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL-HCFYFMGLWRK 432
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ ++E +QFD +G V F+ I Y+ +EG DI S+V R+ +P FVFP G + R
Sbjct: 433 QTTQTQEAEQFDIRGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEIPLFVFPGGVRPSRS 492
Query: 241 SR--HFNEQSGKPCE--------DVKMCQSCSSERQLKRKKEHEIKEVRPD 281
SR H N ++ C+ ++ SCS + + K + +K+ PD
Sbjct: 493 SRTAHKNSRTVPTCDVSADDQVGNLLGVASCSDAQPVSCKGSY-MKQPEPD 542
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/260 (50%), Positives = 173/260 (66%), Gaps = 6/260 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+L+SRFFRVY QWRWPNPVM+C IE G LG VWDPR+NP+DRSH MPIITP Y C NSS
Sbjct: 255 VLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPIITPTYPCQNSS 314
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ VS TL+VMTE+F+ G+ IC+ ++ A+WS LFE YPFFE+Y+NYLQ+DI A
Sbjct: 315 FNVSNSTLRVMTEEFKRGDSICD-----SLDSKVADWSKLFEPYPFFESYKNYLQIDISA 369
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQL LK+E+DT G LQCHP+P+ + D SK +FF L RK
Sbjct: 370 GDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSKRVQVCSFFVALQRK 429
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ G FD T+ F+ ++ Y + + I+ S+V + +P++VFP+G + RP
Sbjct: 430 Q-GAPPSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQIPTYVFPNGIRPVRP 488
Query: 241 SRHFNEQSGKPCEDVKMCQS 260
R + G ++V QS
Sbjct: 489 PRPTIHKPGTNPDNVPTSQS 508
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 137/252 (54%), Positives = 169/252 (67%), Gaps = 15/252 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQW WPNPVM+CPIE ELGF VWDPR+NP DR+H MPIITPAY MNSS
Sbjct: 259 MLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPIITPAYPNMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL+ M +QF N+IC +IEL K+ W ALFE + FF +Y+NYLQVDI A
Sbjct: 319 YSVSTSTLEAMMKQFHTANKICN-----DIELNKSSWGALFEPFLFFRSYQNYLQVDITA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
DADDL WKGWVESR RQLTLK+E+ T G L C P P +Y+D S+ C + +F GL +K
Sbjct: 374 TDADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCTYFMGLRKK 433
Query: 181 ---EVGTSKECQQFDFQGTVKNFRRGIDN-YRVRREGRDIYFSYVCRRHLPSFVFPDGY- 235
EVG + D + + F+ I N + G +I+ S+V + LPS+VFPD Y
Sbjct: 434 PGVEVG-----EVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPSYVFPDEYR 488
Query: 236 KWHRPSRHFNEQ 247
K + S+ N+Q
Sbjct: 489 KRSQSSKSINQQ 500
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 166/242 (68%), Gaps = 6/242 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+L+SRFFRVY QWRWPNPVM+C IE G LG +WDPRKNP+DRSH MPIITP Y C NSS
Sbjct: 259 VLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSHLMPIITPTYPCQNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ VS TL+VMTE+F+ G+ +C+ ++ A+WS LFE YPFFE+Y+NYLQ++I A
Sbjct: 319 FNVSNSTLRVMTEEFKRGDGVCD-----SLDSKVADWSKLFEPYPFFESYKNYLQIEITA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D +DL WKGWVESR RQL LK+E+DT G+LQCHP+PN + D SK +FF L RK
Sbjct: 374 GDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKVQVCSFFVALQRK 433
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ G FD T+ F+ ++ Y + + I S+V + +P++VFP+G + RP
Sbjct: 434 Q-GAQHSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQIPTYVFPNGIRPVRP 492
Query: 241 SR 242
R
Sbjct: 493 PR 494
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 169/248 (68%), Gaps = 6/248 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFF+VY++W+WPNPVM+C IE G LG VWDPR+N +DR H MPIITPAY MNSS
Sbjct: 280 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 339
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ T VM ++F + IC+ I+ KA+W ALFE YPFFE+Y NYL+++I A
Sbjct: 340 YNVSISTRHVMVQEFTRASDICQA-----IDERKADWDALFEPYPFFESYRNYLKIEITA 394
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWVESR R L LKIE+ T +L HP P +ID S+P + +F GL +K
Sbjct: 395 RNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKK 453
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
++ ++E +Q+D + V F+ I Y+ REG +I S+V R+ +PSFVFP G + RP
Sbjct: 454 QISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRP 513
Query: 241 SRHFNEQS 248
SR +++
Sbjct: 514 SRTVGKEA 521
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 169/248 (68%), Gaps = 6/248 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFF+VY++W+WPNPVM+C IE G LG VWDPR+N +DR H MPIITPAY MNSS
Sbjct: 259 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ T VM ++F + IC+ I+ KA+W ALFE YPFFE+Y NYL+++I A
Sbjct: 319 YNVSISTRHVMVQEFTRASDICQA-----IDERKADWDALFEPYPFFESYRNYLKIEITA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWVESR R L LKIE+ T +L HP P +ID S+P + +F GL +K
Sbjct: 374 RNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKK 432
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
++ ++E +Q+D + V F+ I Y+ REG +I S+V R+ +PSFVFP G + RP
Sbjct: 433 QISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRP 492
Query: 241 SRHFNEQS 248
SR +++
Sbjct: 493 SRTVGKEA 500
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 169/248 (68%), Gaps = 6/248 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFF+VY++W+WPNPVM+C IE G LG VWDPR+N +DR H MPIITPAY MNSS
Sbjct: 259 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ T VM ++F + IC+ I+ KA+W ALFE YPFFE+Y NYL+++I A
Sbjct: 319 YNVSISTRHVMVQEFTRASDICQA-----IDERKADWDALFEPYPFFESYRNYLKIEITA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWVESR R L LKIE+ T +L HP P +ID S+P + +F GL +K
Sbjct: 374 RNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKK 432
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
++ ++E +Q+D + V F+ I Y+ REG +I S+V R+ +PSFVFP G + RP
Sbjct: 433 QISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRP 492
Query: 241 SRHFNEQS 248
SR +++
Sbjct: 493 SRTVGKEA 500
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/242 (52%), Positives = 160/242 (66%), Gaps = 6/242 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVY+QW+WPNPV +C IE G LG VWDPR+N +DR H+MPIITPAY CMNSS
Sbjct: 257 MLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCMNSS 316
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS T VM ++F G IC+ I+ +A W LFE YPFFE Y+NYL+V I A
Sbjct: 317 YNVSTSTRYVMIQEFTRGYEICQA-----IDENRATWDDLFEPYPFFELYKNYLEVGITA 371
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
DDL WKGWVESR R L LK E+ T+ +L HP+P + D S+P +S +F GL RK
Sbjct: 372 RSEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPL-HSFYFMGLWRK 430
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E +QFD +G V F+ + Y RREG DI S+V R+ +P FVFP G + R
Sbjct: 431 QTAQPQEAEQFDIRGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDIPLFVFPGGVRPPRS 490
Query: 241 SR 242
SR
Sbjct: 491 SR 492
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 168/248 (67%), Gaps = 6/248 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFF+VY++W+WPNPVM+C IE G LG VWDPR+N +DR H MPIITPAY MNSS
Sbjct: 259 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ T VM ++F + IC+ I+ +A+W ALFE YPFFE+Y NYL+++I A
Sbjct: 319 YNVSISTRHVMVQEFTRASDICQA-----IDEREADWDALFEPYPFFESYRNYLKIEITA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWVESR R L LKIE+ T +L HP P +ID S+P + +F GL +K
Sbjct: 374 RNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKK 432
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
++ ++E +Q+D + V F+ I Y+ REG +I S+V R+ +PSFVFP + RP
Sbjct: 433 QISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGRIRPSRP 492
Query: 241 SRHFNEQS 248
SR +++
Sbjct: 493 SRTVGKEA 500
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 162/236 (68%), Gaps = 7/236 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+LVSRFFRV+ QW WPN + +C + G LG VWDPR NPKDR H MPIITPAY CMNSS
Sbjct: 259 ILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL++M +FQ GN ICE +E KA+W LFE + FFEAY+NYLQ+DI A
Sbjct: 319 YNVSESTLRIMKGEFQRGNEICEA-----MESNKADWDTLFEPFAFFEAYKNYLQIDISA 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
A+ DDL WKGWVESR RQLTLKIE+ +L CHP+P+ + D S+P + ++F GL RK
Sbjct: 374 ANVDDLRKWKGWVESRLRQLTLKIERHFK-MLHCHPHPHDFQDTSRPL-HCSYFMGLQRK 431
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 236
+ + E +QFD + TV+ F+ ++ Y + G +I ++ RR LP+FVFP G +
Sbjct: 432 QGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVR 487
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/246 (52%), Positives = 167/246 (67%), Gaps = 6/246 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LVSRFFRVYTQWRWPNPVM+CPIE LG VWDPR+N KDR+H MPIITPAY MNSSY
Sbjct: 264 LVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSMNSSY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS TL++M E+ Q GN I + E+E W LFE + FFEAY+NYLQ+DI A
Sbjct: 324 NVSWSTLRIMEEELQRGNEIVK-----EMETENTGWITLFEPFLFFEAYKNYLQIDITAE 378
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+ DL WKGWVESR R LT KIE+DT G+LQCHP+P ++ D S+ + +F GL RKE
Sbjct: 379 NDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSF-HYCYFMGLRRKE 437
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPS 241
++E +QFD + TV +F+ + Y + G I+ ++ R+++P+FVFP G + +P
Sbjct: 438 GSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPM 497
Query: 242 RHFNEQ 247
+ EQ
Sbjct: 498 KVAGEQ 503
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 167/247 (67%), Gaps = 6/247 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LVSRFFRVYTQWRWPNPVM+CPIE LG VWDPR+N KDR+H MPIITPAY MNSSY
Sbjct: 264 LVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSMNSSY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS TL++M E+ Q GN I + E+E W LFE + FFEAY+NYLQ+DI A
Sbjct: 324 NVSWSTLRIMEEELQRGNEIVK-----EMETENTGWITLFEPFLFFEAYKNYLQIDITAE 378
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+ DL WKGWVESR R LT KIE+DT G+LQCHP+P ++ D S+ + +F GL RKE
Sbjct: 379 NDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSF-HYCYFMGLRRKE 437
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPS 241
++E +QFD + TV +F+ + Y + G I+ ++ R+++P+FVFP G + +P
Sbjct: 438 GSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPM 497
Query: 242 RHFNEQS 248
+ EQ
Sbjct: 498 KVAGEQG 504
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 162/236 (68%), Gaps = 7/236 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+LVSRFFRV+ QW WPN + +C + G LG VWDPR NPKDR H MPIITPAY CMNSS
Sbjct: 132 ILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSS 191
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL++M +FQ GN ICE +E KA+W LFE + FFEAY+NYLQ+DI A
Sbjct: 192 YNVSESTLRIMKGEFQRGNEICEA-----MESNKADWDTLFEPFAFFEAYKNYLQIDISA 246
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
A+ DDL WKGWVESR RQLTLKIE+ +L CHP+P+ + D S+P + ++F GL RK
Sbjct: 247 ANVDDLRKWKGWVESRLRQLTLKIERHFK-MLHCHPHPHDFQDTSRPL-HCSYFMGLQRK 304
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 236
+ + E +QFD + TV+ F+ ++ Y + G +I ++ RR LP+FVFP G +
Sbjct: 305 QGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVR 360
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 160/242 (66%), Gaps = 6/242 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVY+QW+WPNPV +C IE G LG VWDPR+N +DR H+MPIITPAY CMNSS
Sbjct: 278 MLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCMNSS 337
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS+ T VM ++F G IC+ I+ +A W LFE YPFFE Y NYL+V I A
Sbjct: 338 YNVSVSTRYVMVQEFTRGYEICQA-----IDENRATWDDLFEPYPFFELYRNYLEVVISA 392
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ DDL WKGWVESR R L LK E+ T+ +L HP+P + D S+P +S +F GL RK
Sbjct: 393 RNEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPL-HSFYFMGLWRK 451
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 240
+ +E +QFD +G V F+ + Y R EG DI S+V R+ +P FVFP G + R
Sbjct: 452 QTVQPQEAEQFDIRGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDIPLFVFPGGVRPPRS 511
Query: 241 SR 242
SR
Sbjct: 512 SR 513
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/321 (43%), Positives = 192/321 (59%), Gaps = 17/321 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQW WPNPVM+C IE G +G +WDPR+ P DR H MPIITPAY CMNSS
Sbjct: 260 MLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMPIITPAYACMNSS 319
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL +MTE+FQ GN ICE A ++ W A +P +Y+NYLQ+DI
Sbjct: 320 YNVSSITLCIMTEEFQRGNEICEYFAQDDL-----TW-AFKLKFPCSNSYKNYLQIDISG 373
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKP--CPNSAFFWGLS 178
+ADDL WKGWVES RQL L+IE+ G+LQCHP+P D S+P C N F L
Sbjct: 374 ENADDLRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKSRPFHCSN---FMALQ 430
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
RK+ + QFD + TV+ F+ ++ Y + G D++ +V R++P+FVFP +
Sbjct: 431 RKQGVPVNDGGQFDIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKHRNIPTFVFPGSVRPS 490
Query: 239 RPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS----EVP 294
PS+ E K ++ KM +++ + +++ E + +R KS+ SS E
Sbjct: 491 HPSKVTWEI--KKSQEGKMAVLGANDDRKRKQAEDSVDSLRNSKSMASLPPSSREVHEDE 548
Query: 295 QPVSPGMTTEDPTNNSEVMSS 315
P+SP + +N+SE+ S+
Sbjct: 549 NPISPASSCFVKSNDSEINST 569
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 151/243 (62%), Gaps = 14/243 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEM--GELGFS--VWDPRKNPKDRSHRMPIITPAYHC 56
ML+ RFFRV+ +W+WP+PVM+ IE GELG S VWDPR+NP+D+ H MPI+TPAY C
Sbjct: 257 MLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPC 316
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS Y VS TL+V+TEQ G+ +C+ + G W LF+ + FF AY++YLQV
Sbjct: 317 MNSGYNVSHATLRVITEQLAVGDAVCQ--EIVKAGSGGGGWDKLFQPFNFFGAYKSYLQV 374
Query: 117 D--IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-----DPSKPCP 169
D + + DDL WKGWVESR R L+ ++E DT+G+L CH +P Y +P +
Sbjct: 375 DVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRR 434
Query: 170 NSAFFWGLSRKEVGTSKECQQ-FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPS 228
S+FF GLS+ ++ Q FD + T + F+ + Y R G ++ ++V R+ LPS
Sbjct: 435 TSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPS 494
Query: 229 FVF 231
+V
Sbjct: 495 YVL 497
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 151/243 (62%), Gaps = 14/243 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEM--GELGFS--VWDPRKNPKDRSHRMPIITPAYHC 56
ML+ RFFRV+ +W+WP+PVM+ IE GELG S VWDPR+NP+D+ H MPI+TPAY C
Sbjct: 257 MLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPC 316
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS Y VS TL+V+TEQ G+ +C+ + G W LF+ + FF AY++YLQV
Sbjct: 317 MNSGYNVSHATLRVITEQLAVGDAVCQ--EIVKAGSGGGGWDKLFQPFNFFGAYKSYLQV 374
Query: 117 D--IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-----DPSKPCP 169
D + + DDL WKGWVESR R L+ ++E DT+G+L CH +P Y +P +
Sbjct: 375 DVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRR 434
Query: 170 NSAFFWGLSRKEVGTSKECQQ-FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPS 228
S+FF GLS+ ++ Q FD + T + F+ + Y R G ++ ++V R+ LPS
Sbjct: 435 TSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPS 494
Query: 229 FVF 231
+V
Sbjct: 495 YVL 497
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 110/255 (43%), Positives = 155/255 (60%), Gaps = 16/255 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEM--GELGFS--VWDPRKNPKDRSHRMPIITPAYHC 56
ML+ RFFRV+ +W+WP+PVM+ IE GELG S VWDPR+NP+D+ H MPI+TPAY C
Sbjct: 257 MLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPC 316
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS Y VS TL+V+TEQ G+ +C+ + G W LF+ + FF AY++YLQV
Sbjct: 317 MNSGYNVSHATLRVITEQLAVGDAVCQ--EIVKAGSGGGGWDKLFQPFNFFGAYKSYLQV 374
Query: 117 D--IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-----DPSKPCP 169
D + + DDL WKGWVESR R L+ ++E DT+G+L CH +P Y +P +
Sbjct: 375 DVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRR 434
Query: 170 NSAFFWGLSRKEVGTSKECQQ-FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPS 228
S+FF GLS+ ++ Q FD + T + F+ + Y R G ++ ++V R+ LPS
Sbjct: 435 TSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPS 494
Query: 229 FVFPDGYKWHRPSRH 243
+V + P RH
Sbjct: 495 YVLRQLLR--SPGRH 507
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 150/253 (59%), Gaps = 18/253 (7%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFF+V +QW+WP PVM+C IE ELG VWD R+NP+DR+H MP+ITPAY CMN
Sbjct: 260 MLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNPRDRTHLMPVITPAYPCMNC 319
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE-WSALFEHYPFFEAYENYLQVD- 117
+Y VS T +++ EQ Q G+ C+ EI G W ALF+ +PFF +++YLQVD
Sbjct: 320 TYNVSQATQRIIKEQIQAGHVACQ-----EIAAGGDRGWGALFQPFPFFRTHKSYLQVDA 374
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-IDPSKPCPNSAFFWG 176
VA ++L WKGWVESR RQL K+E+DT G L CH P Y +P S+FF G
Sbjct: 375 TVAGGEEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRCASSFFVG 434
Query: 177 LSR------KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
LS+ + + QFD + T F + + YR R G ++ +V R+ LP +V
Sbjct: 435 LSKPQQQRQQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLELAVKHVRRKDLPPYV 494
Query: 231 FPDGYKWHRPSRH 243
+K P+ H
Sbjct: 495 M---HKIRGPNIH 504
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 145/239 (60%), Gaps = 12/239 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFF+V++ WRWP PVM+C IE ELG VWD R+N DRSH MP+ITPAY CMN
Sbjct: 255 MLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMPVITPAYPCMNC 314
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVD-I 118
+Y VS T +V+ EQ Q G+ C+ A G +W ALF+ PFF +++YLQVD
Sbjct: 315 TYNVSRATHRVIKEQIQAGDVACQKIAAG----GGRDWGALFQPSPFFSTHKSYLQVDAA 370
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-IDPSKPCPNSAFFWGL 177
VA A++L WKGWVESR RQL K+E+DT G L CH P Y +P S+FF GL
Sbjct: 371 VAGGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRRASSFFVGL 430
Query: 178 SRKEVGTSKECQQ-----FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
S+ + + FD + TV F++ + +Y+ R G ++ +V R LP++V
Sbjct: 431 SKPQQQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKFWRPGLELVVKHVRRNKLPAYVM 489
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/242 (43%), Positives = 148/242 (61%), Gaps = 16/242 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
+LVSRFF+V W+WPNPV + IE + L VWDPR+NP+DR+H MP++TPAY CMN
Sbjct: 257 VLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTPAYPCMN 316
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI 118
S Y VS TL+ +T+Q Q GN +C+ +I A W ALFE + FF+ Y++YL+VD+
Sbjct: 317 SCYNVSHATLRTITQQLQIGNAVCQ-----KIVASGAGWGALFEPFHFFKEYKSYLRVDV 371
Query: 119 VAADA---DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-IDPSKPCPNSAFF 174
A DL WKGWVESR RQL +++E T G+L CHP P Y P+ ++FF
Sbjct: 372 KVAGGGGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAYAAKPTDLQRTTSFF 431
Query: 175 WGLSRKEVGTSKECQQ-----FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSF 229
GLS+ + ++ QQ FD + T + F+R + Y R G ++ S+ R+ LPS+
Sbjct: 432 VGLSKPQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVSHNRRKDLPSY 491
Query: 230 VF 231
V
Sbjct: 492 VL 493
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 123/211 (58%), Gaps = 37/211 (17%)
Query: 75 FQCGNRICEVRAYF--EIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGW 132
+ GN I A EIEL KA+WSALFE Y FFEAY+NYLQVDIVAADA DLL WKGW
Sbjct: 15 LKKGNAIASKVATTTKEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGW 74
Query: 133 VESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQQFD 192
VESR RQLTLK RKE T +E QQFD
Sbjct: 75 VESRLRQLTLK-----------------------------------RKEGVTGQEGQQFD 99
Query: 193 FQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPC 252
+ TV FR+ I+ Y + G DIY S+V RR LP FVFPDGYK RPSRH N+Q+ +
Sbjct: 100 IRETVDEFRQDINMYLPWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTS 159
Query: 253 EDVKMCQSCSSERQLKRKKEHEIKEVRPDKS 283
EDV QS S+ER +KRK + E+ ++P S
Sbjct: 160 EDVARSQSGSAERHVKRKNDCEMANLKPSVS 190
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 127/226 (56%), Gaps = 5/226 (2%)
Query: 8 RVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLG 66
+VY+QW WP P+M+ IE L VWDPR+NP+DR+H MPIITPAY CMNSSY VS
Sbjct: 267 QVYSQWAWPTPIMLRAIERDPSLAMPVWDPRENPRDRTHLMPIITPAYPCMNSSYNVSEC 326
Query: 67 TLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 126
TL VM E+F+ G+ +C R G +W+ L E PFFE ++++LQV+++A+ +D
Sbjct: 327 TLAVMAEEFRRGDEVCG-RIMTHNGSGLTDWAQLLEPLPFFEGFKHFLQVEVMASSQEDF 385
Query: 127 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID--PSKPCPNSAFFWGLSRKEVGT 184
W+GWV SR R L +Q Q + P++ P +F GLS+K+
Sbjct: 386 EVWEGWVHSRMRLLIKVDQQQQQQQQQQDGGGGGSVADPPAQQQPRCFYFMGLSKKKAMI 445
Query: 185 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+ + D V F + + RREG DI ++ +R LP +V
Sbjct: 446 IPQ-SKVDLTQPVNEFAHKVKEFEQRREGMDISVRHLLQRQLPEWV 490
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
Query: 135 SRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQ 194
SRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E +ECQQFD +
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60
Query: 195 GTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCED 254
GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N GK ED
Sbjct: 61 GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120
Query: 255 VKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
+ S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 166
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 132/263 (50%), Gaps = 22/263 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+SRFFR+Y W WPNP+M+ ++ LGFS W+P+ N +DRSH MPIITPAY +NSS
Sbjct: 85 LLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVRDRSHLMPIITPAYPALNSS 144
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y V TL V+ +F G + EIE K W+ LF FF+ +++L+V+I A
Sbjct: 145 YNVMASTLCVLKTEFDRG-----LDRTLEIETKKFSWAKLFVAPAFFQRSKHFLRVEITA 199
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN--KYIDPSKPCPNSA------ 172
A D W GWVESR R L L++E ++ ++ HP+ +ID P S+
Sbjct: 200 RSAQDFDGWFGWVESRLRHLFLRLEALSD--IRIHPFARFFDFIDTKDTRPESSSKCEVH 257
Query: 173 ---FFWGL---SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
F GL + K + D +++F D + R G D+ +V R +
Sbjct: 258 TSWLFIGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTDQWEGRHGGMDMQIDHVTRSQI 317
Query: 227 PSFVFPDGYKWHRPSRHFNEQSG 249
P +V S+H + G
Sbjct: 318 PEWVLESVASGADDSKHVRKHKG 340
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 133/264 (50%), Gaps = 26/264 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+SRFFR+Y W WPNP+M+ ++ LGFS W+P+ N +DRSH MPIITPAY +NSS
Sbjct: 85 LLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVRDRSHLMPIITPAYPALNSS 144
Query: 61 YKVSLGTLQVMTEQFQCG-NRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
Y V TL ++ +F G NR EIE K+ W+ LF FF+ +++L+V I
Sbjct: 145 YNVMASTLHILKAEFGKGFNRT------LEIETKKSSWAKLFIAPVFFQRSKHFLRVQIT 198
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID------------PSKP 167
A +A+D W GWVESR R L L++E L+ HP+ ++ D +
Sbjct: 199 ANNAEDFDGWFGWVESRLRHLFLRLEALPE--LRIHPFA-RFFDFGETKGATPEGSSKRE 255
Query: 168 CPNSAFFWGL---SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRR 224
S F GL + V + D +++F D + R G D+ +V R
Sbjct: 256 VHTSWLFIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTDQWEARHGGMDMQIDHVTRS 315
Query: 225 HLPSFVFPDGYKWHRPSRHFNEQS 248
+P +V S+H ++S
Sbjct: 316 QIPEWVLESVVNGASDSKHLRKRS 339
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 140/269 (52%), Gaps = 40/269 (14%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
+++SRFFRVY+QW+WPNPV++ I G+ GF VW+P P DR H MP+ITPAY MN
Sbjct: 276 VILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAVFPADRKHLMPVITPAYPSMN 335
Query: 59 SSYKVSLGTLQVMTEQFQCG-------------------------NRICEVRAYFEIELG 93
S++ VS TL+++ E+ G ++ +V E L
Sbjct: 336 STHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTISTEDTENDQTTQVEHSEETNLV 395
Query: 94 K----AEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTN 149
K WS LFE FF ++NYLQ+++++ A++ W G+VES+ R LTLK+E ++
Sbjct: 396 KETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKWHGFVESKLRVLTLKLEILSH 455
Query: 150 GLLQCHPYPNKYIDPSKPCPNSAFFWGLS-----RKEVGTSKECQQFDFQGTVKNFRRGI 204
L+ +PYP Y P S FF GLS SKE ++ D G V + +
Sbjct: 456 TLI--YPYPVPYTRPGVQFCES-FFIGLSFSLPKLPNQNGSKE-RKIDMSGPVSEWVNYV 511
Query: 205 DNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
++ R ++ +V R+ LP +VF D
Sbjct: 512 LSWPFRTSDMEVSVEHVKRKFLPEYVFKD 540
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 143/281 (50%), Gaps = 22/281 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++ RFF+VY W+WP P+++C I E G LG VW+P++ D++H MPIITPAY MNS+
Sbjct: 302 IIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPIITPAYPSMNST 358
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TLQ+M +F G I +IE G+ W L E FF Y Y+++D +
Sbjct: 359 YNVSKSTLQLMKSEFVRGAEITR-----KIETGECTWKNLLEKCDFFTRYSFYIEIDCYS 413
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-------DPSKPCPNSAF 173
+ +D W+GW+ES+ R L +E T + PYP + +P + C ++F
Sbjct: 414 MNEEDSRKWEGWIESKLRFLISNLES-TPKMKFAVPYPKGFTNNLHKANNPDQIC--TSF 470
Query: 174 FWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNY---RVRREGRDIYFSYVCRRHLPSFV 230
F GLS T + D V F I ++ + + DI Y+ ++ LP+FV
Sbjct: 471 FMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPAFV 530
Query: 231 FPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKK 271
+G + + +G+P K +S +S+ +L K
Sbjct: 531 KDEGPEEPVKTTKKRSSTGEPSATRKKLKSENSDNKLNSPK 571
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 74/84 (88%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE +LGFS+WDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEV 84
Y VS TL+V+ EQFQ GN++C+V
Sbjct: 328 YNVSTSTLRVIMEQFQFGNKVCQV 351
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 125/232 (53%), Gaps = 10/232 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WP PV++ P + L + VWDPR N DR H MPIITPAY NS++
Sbjct: 273 LVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 332
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + E EI GKA W LFE FF Y++++ + ++
Sbjct: 333 NVSCSTRAVMQEEFRQGFNMTE-----EIMTGKASWDKLFEPPNFFVKYKHFIVLIASSS 387
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLS 178
+D L W G VES+ R L L +E++ + L H P +Y DP +P P+ + +F GL
Sbjct: 388 SVEDQLEWVGLVESKIRHLILALERNDHITL-AHINPEQY-DPVQPEPDTISTMWFIGLV 445
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
K+ + D Q R + ++GR I +V R+ L S++
Sbjct: 446 FKKTESLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQLSSYL 497
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 139/272 (51%), Gaps = 18/272 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+++FF ++++W WP PV++ +E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+FQ G + + EI GK++WS LFE FF+ Y++Y+ + A
Sbjct: 327 NVSVSTRAVMVEEFQRGLEVTD-----EILKGKSDWSKLFEPLNFFQKYKHYIVLTASAF 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
+ L W G V+S+ R L +E++ T +Q +P + + S +F GL
Sbjct: 382 TEEHHLNWIGLVKSKIRVLVGNLERNEFITIAHVQPQSFPGNEVLYKQNAYVSMWFLGLV 441
Query: 179 RKEVGTSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K+ ++ + D +++F R + +EG I +YV R+ L F P G
Sbjct: 442 FKKAESAVKT-NVDLTHGIQSFTDTVYRQASALNILKEGMKIEATYVKRKQLHYF-LPAG 499
Query: 235 Y----KWHRPSRHFNEQSGKPCEDVKMCQSCS 262
K R S SG C+ + +SCS
Sbjct: 500 TLQKRKKQRVSDISQNNSGLQCKRSSLGESCS 531
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 149/303 (49%), Gaps = 27/303 (8%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLV FF++++ W+W PVM+ PI + G G VWD R N +R M I+TPAY NS
Sbjct: 275 MLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQNS 334
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ VS+ TL+V+ +F+ G + ++ I L A+W L+ F E Y++YL V I
Sbjct: 335 TFNVSVSTLEVLKAEFKRGKEVTKM-----ILLNTAKWEQLWCSLNFLEKYKHYLMVTIS 389
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKP-CPNSAFFWGLS 178
A + DD W+GWV SR + L IE T G + HP ++Y DP K + F GL
Sbjct: 390 AKNEDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPEKDENSHVTLFLGLF 449
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIY-------FSYVCRRHLPSFVF 231
+ +E + V+ F+ + ++ R G + Y+ R+ LPSFV
Sbjct: 450 PSSLKKKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQANVKYLKRKDLPSFVK 509
Query: 232 P--DGY--KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQL----KRKKEHEIKEVRPDKS 283
DGY + P + E+ ED + + S E+ L K + KE++ D S
Sbjct: 510 EEIDGYVKDIYAPEK---EKKAASAEDEE--KKISEEKPLPLGDDTKAARKRKEMQEDDS 564
Query: 284 VKQ 286
+ Q
Sbjct: 565 ITQ 567
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M S++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRSHRMPIITPAYPAMCSTH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ G I + ++ +G AEWS LF + FF Y YLQV
Sbjct: 316 NVTASTQMIMTEEFKKGADIVD-----KVIVGTAEWSELFAKHDFFHKYRYYLQVIASTG 370
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
AD + W G VESR RQL +K+E + L+ HP+
Sbjct: 371 SADLQIKWSGTVESRIRQLVMKLEY-VDSLILAHPF 405
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 6/153 (3%)
Query: 5 RFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVS 64
RFF + QW+WP PV++ PIE G L VW+P+ P DRSHRMPIITPAY M S++ V+
Sbjct: 277 RFFIIMHQWQWPAPVLLKPIEEGPLQVRVWNPKLYPSDRSHRMPIITPAYPSMCSTHNVT 336
Query: 65 LGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 124
L T Q+MT +F+ I + ++ +G A+WS LF+ + FF Y YLQ+ + AD
Sbjct: 337 LSTQQIMTAEFKRAADIVD-----KVFVGSAKWSELFQPHDFFSKYRYYLQITASSGSAD 391
Query: 125 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
L W G VESR RQL +K+E + LL HP+
Sbjct: 392 VQLKWSGTVESRIRQLVMKLEY-VDTLLLAHPF 423
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 128/241 (53%), Gaps = 10/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 275 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTF 334
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M E F+ G I E EI +GKA W LFE FF Y++Y+ + +
Sbjct: 335 NVSVSTRTIMQEAFETGLSITE-----EIIMGKATWDKLFEPPNFFGKYKHYIVLLARSL 389
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLS 178
A+D L W G VES+ R L +E++ + L H P + P +P P S +F GL
Sbjct: 390 SAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLEPEPEGHCSMWFIGLL 447
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
+ +D + V + +R + V +EG I +V R+ L ++V P +
Sbjct: 448 FAKSENLNVDLTYDIKSFVDSIQRQAEQLSVLKEGMWIEAKHVKRKDLHTYVSPSLLRRE 507
Query: 239 R 239
R
Sbjct: 508 R 508
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 129/241 (53%), Gaps = 10/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 271 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTF 330
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M E F+ G I E EI +GKA W LFE FF Y++Y+ + ++
Sbjct: 331 NVSVSTRTIMQEAFENGLSITE-----EIIMGKANWDKLFEPPNFFSKYKHYIVLLARSS 385
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTN-GLLQCHP--YPNKYIDPSKPCPNSAFFWGLS 178
A+D L W G VES+ R L +E++ + L +P +P +P K C S +F GL
Sbjct: 386 TAEDQLEWCGLVESKIRHLIGTLERNPHINLAHVNPEAFPPLDPEPDKHC--SMWFIGLL 443
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
+ +D + V+ R + + +EG I +V R+ L ++V P K
Sbjct: 444 FAKSENLNIDLTYDIKSFVETIERQAEQINMLKEGMWIEAKHVKRKDLHTYVSPSLLKKE 503
Query: 239 R 239
R
Sbjct: 504 R 504
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 132/241 (54%), Gaps = 17/241 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +M+E+F+ G + + EI GKA+WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSTSTRTIMSEEFKNGLTVTD-----EILQGKADWSKLFEPPNFFQKYKHYIVLTASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN-----SAFFWG 176
++ L W G VES+ R L +E++ L H P + SK N S +F G
Sbjct: 384 TEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPG-SKENHNENEFVSMWFIG 441
Query: 177 LSRKEVGTSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHLPSFVFP 232
+S K++ S +C D +++F R N + ++G I ++V ++ L ++ P
Sbjct: 442 ISFKKLDNS-DCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLPP 500
Query: 233 D 233
+
Sbjct: 501 E 501
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 126/249 (50%), Gaps = 20/249 (8%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLV FF+++ W+W PVM+ I G VWD R N +R M IITPAY NS+
Sbjct: 242 MLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ V+ TL V+ +F+ G C +I +G+ +W +L+E PFF +++YLQV + A
Sbjct: 302 FNVTHSTLHVLKREFKRGRETCA-----KILMGQTKWESLWEPLPFFTMHKHYLQVTMCA 356
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP-NSAFFWGL-- 177
DD W+GWV SR R L +E + G L HPYP + DP+K + ++ GL
Sbjct: 357 ITEDDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYIGLGP 416
Query: 178 ----------SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 227
R + + +Q FQ V ++ D + G +++ ++ R+ +P
Sbjct: 417 APPPTTGGPAPRGTLNLNPAVEQ--FQMLVTSWVNRADGTVQWQPGMEVHVKHMKRKDVP 474
Query: 228 SFVFPDGYK 236
++ PD K
Sbjct: 475 AWAIPDSGK 483
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+PR P DRSHRMPIITPAY M +++
Sbjct: 258 IVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADRSHRMPIITPAYPSMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +MTE+F+ G+ I E ++ +G +WS LF + FF Y YLQV
Sbjct: 318 NVSQSTQMIMTEEFKKGSEIVE-----KVIMGTTQWSELFVKHDFFHKYRYYLQVIASTG 372
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D D + W G VESR RQL +K+E + L HP+
Sbjct: 373 DPDLHIKWAGTVESRIRQLVMKLEY-VDSLTLAHPF 407
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 275 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 334
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M E F+ G I E EI +GKA W LFE FF Y++Y+ + ++
Sbjct: 335 NVSVSTRTIMQEAFENGLAITE-----EIIIGKATWDKLFEPPNFFGKYKHYIVLLARSS 389
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSR 179
A+D L W G VES+ R L +E++ + L H P + +DP S +F GLS
Sbjct: 390 SAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPEPGKHCSMWFIGLSF 448
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+ + +D + V+ R + + +EG I +V R+ L ++V
Sbjct: 449 AKSESLNIDLTYDIKSFVETIERQAEQISMLKEGMWIEAKHVKRKDLHTYV 499
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 127/241 (52%), Gaps = 10/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M E F+ G I E EI +GKA W LFE FF Y++Y+ + +
Sbjct: 336 NVSVSTRTIMQEAFENGLSITE-----EIIMGKATWDKLFEPPNFFGKYKHYIVLLARSL 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLS 178
A+D L W G VES+ R L +E++ + L H P + P +P P S +F GL
Sbjct: 391 TAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLEPEPERHCSMWFIGLL 448
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
+ +D + V + R + + +EG I +V +R L ++V P K
Sbjct: 449 FAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPSLLKRE 508
Query: 239 R 239
R
Sbjct: 509 R 509
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 122/232 (52%), Gaps = 13/232 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G + + EI LG+ +WS LFE FF Y++Y+ + A+
Sbjct: 326 NVSISTRSVMVEEFKQGLLVTD-----EILLGRCDWSKLFEPPNFFHKYKHYIVLTASAS 380
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGL 177
+ L W G VES+ R L +E++ N + H P + C + S +F G+
Sbjct: 381 TEEHHLEWVGLVESKIRVLVGNLERN-NFITLAHVNPQSFPGNRDHCKDNEYVSMWFLGI 439
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+V ++ D Q R +N + ++G I ++V R+ L
Sbjct: 440 IFKKVENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQL 491
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 127/241 (52%), Gaps = 10/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M E F+ G I E EI +GKA W LFE FF Y++Y+ + +
Sbjct: 336 NVSVSTRTIMQEAFENGLSITE-----EIIMGKATWDKLFEPPNFFGKYKHYIVLLARSL 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLS 178
A+D L W G VES+ R L +E++ + L H P + P +P P S +F GL
Sbjct: 391 TAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLEPEPERHCSMWFIGLL 448
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
+ +D + V + R + + +EG I +V +R L ++V P K
Sbjct: 449 FAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPSLLKRE 508
Query: 239 R 239
R
Sbjct: 509 R 509
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 122/232 (52%), Gaps = 13/232 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G + + EI LG+ +WS LFE FF Y++Y+ + A+
Sbjct: 325 NVSISTRSVMVEEFKQGLLVTD-----EILLGRCDWSKLFEPPNFFHKYKHYIVLTASAS 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGL 177
+ L W G VES+ R L +E++ N + H P + C + S +F G+
Sbjct: 380 TEEHHLEWVGLVESKIRVLVGNLERN-NFITLAHVNPQSFPGNRDHCKDNEYVSMWFLGI 438
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+V ++ D Q R +N + ++G I ++V R+ L
Sbjct: 439 IFKKVENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQL 490
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M S++
Sbjct: 276 IVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRSHRMPIITPAYPAMCSTH 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ G I + ++ +G A WS LF + FF Y YLQV
Sbjct: 336 NVTASTQIIMTEEFKRGADIVD-----KVIVGSATWSELFAKHDFFHKYRYYLQVIASTG 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+AD + W G VESR RQL +K+E + L+ HP+
Sbjct: 391 NADLQIKWSGTVESRIRQLVMKLEY-VDSLILAHPF 425
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 130/239 (54%), Gaps = 13/239 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +M E+F+ G + + EI GKA+WS LFE FF+ Y +Y+ + A+
Sbjct: 329 NVSTSTRTIMNEEFKNGLTVTD-----EILQGKADWSKLFEPPNFFQQYRHYIVLTASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P + ++ S +F G+S
Sbjct: 384 TEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGIS 443
Query: 179 RKEVGTSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
K++ S +C D +++F R N + ++G I ++V ++ L ++ P+
Sbjct: 444 FKKLDNS-DCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLPPE 501
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 17/183 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V+RFF V +QW WP+PV++ I G +G VW+P+ P+DR HRMPIITPAY CM S
Sbjct: 251 IVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMPIITPAYPCMCS 310
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ V+ T QVM +F+ G + + I G A+WSALFE + FF Y NY+Q+
Sbjct: 311 THNVTKSTAQVMMTEFKRGLAVTDA-----IATGSAQWSALFEKHDFFTRYRNYIQITAS 365
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
+ +AD L W G VESR R L LK+E+ + HP+ + + + + L+R
Sbjct: 366 SPEADAHLKWAGTVESRLRLLVLKVEE-IETVDMAHPFIKGFSNTT---------YALNR 415
Query: 180 KEV 182
+EV
Sbjct: 416 QEV 418
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V RFF+V+ +W WP P+M+ IE +G VWDPR NP+D H MPIITPAY NSS
Sbjct: 249 VIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITPAYPAANSS 308
Query: 61 YKVSLGTLQVMT------------EQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFE 108
Y VS TL M E+F+ G ++C E G +W L E PFF
Sbjct: 309 YNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVC---TRILAEGGLTKWHKLLEPVPFFR 365
Query: 109 AYENYLQVDIVAADADDLL-------------TWKGWVESRFRQLTLKIEQDTNGLLQCH 155
Y NYLQ + + + W GWV SR RQL +++E +
Sbjct: 366 NYRNYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVEP----FVTVR 421
Query: 156 PYPNKYIDPSKP----CPNSAF-FWGLSRKEVGT--SKECQQFDFQGTVKNFRRGIDNYR 208
P+P P P P F F GL +K + + + V+ F+ + Y
Sbjct: 422 PWPKAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPVQEFKNQVMGYL 481
Query: 209 VRREGRDIYFSYVCRRHLPSFVF 231
+EG + ++ ++ LPSFV
Sbjct: 482 SWKEGMHVLITHQMQKALPSFVL 504
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 125/241 (51%), Gaps = 9/241 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+ +FF V+++W WP PV++ I E LGF VWDPR NP DR H MPIITPAY NS+
Sbjct: 255 LIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLMPIITPAYPQQNST 314
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VSL T +M E+F+ G ++ + EI GKA W LFE FF Y++Y+ + A
Sbjct: 315 YNVSLSTRAIMQEEFKIGLQVTQ-----EIFEGKATWDKLFEPGSFFGKYKHYIVLSTSA 369
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLS 178
+ L W G VES+ R L +E+ T + H P +Y ++P + + +F GL
Sbjct: 370 TSKEHHLEWVGLVESKVRILIGNLER-TAYIALAHVNPKQYPPLNPQEDVFVTNWFIGLQ 428
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
++ F+ Q R + +EG I V R+ L ++ P K++
Sbjct: 429 FNKIEGGNIDLTFEIQSFTDTVHRQAISNGTLKEGMKIEARSVRRKQLGEYLPPSLLKFN 488
Query: 239 R 239
+
Sbjct: 489 K 489
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 123/246 (50%), Gaps = 17/246 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI LGKAEWS LF+ FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITD-----EILLGKAEWSKLFDAPNFFQKYKHYILLLASAP 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ + H P + PS+ F W GL
Sbjct: 380 TEKQRLEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAPSENTEKEEFRTMWVIGL 438
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFV 230
K++ S+ +D Q R N ++ I +V R+ LPS V
Sbjct: 439 VFKKMENSENLSVDLTYDIQSFTDTVYRQAINSKMFENEMKIAAMHVKRKQLHQLLPSHV 498
Query: 231 FPDGYK 236
P K
Sbjct: 499 LPKKKK 504
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 128/232 (55%), Gaps = 13/232 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +M+E+F+ G + + EI GKA+WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSTSTRTIMSEEFKNGLTVTD-----EILQGKADWSKLFEPPNFFQKYKHYIVLTASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P + ++ S +F G+S
Sbjct: 384 TEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHNENEFVSMWFIGIS 443
Query: 179 RKEVGTSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHL 226
K++ S +C D +++F R N + ++G I ++V ++ L
Sbjct: 444 FKKLDNS-DCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQL 494
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW+WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAHRMPIITPAYPAMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V T ++TE+ + G+ + E +I +G A+WS LF + FF+ Y YLQV
Sbjct: 316 NVMASTQMIITEELKKGSELVE-----KIIVGTADWSELFIKHDFFDKYRYYLQVIASTG 370
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+AD L W G VESR RQL +K+E + L HP+
Sbjct: 371 NADLQLKWSGTVESRIRQLVMKLEY-VDSLTLAHPF 405
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 126/237 (53%), Gaps = 13/237 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++RFF++Y W+WP+P+++C I + G+L VW+ ++ D+SH MPI+TPAY MNS+
Sbjct: 359 IINRFFKIYDGWKWPSPILLCQIQDGGQLAAKVWNQKR---DKSHLMPILTPAYPSMNST 415
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS TL ++ +F G I + +I+ G+ +W+ L E FF Y YLQ+D+ A
Sbjct: 416 YNVSRSTLSLLKSEFSRGAEITK-----KIDSGERKWTDLVEKGDFFTRYRFYLQIDVSA 470
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGL 177
+ D W+GW+ES+ R L +EQ N PY + + + + FF GL
Sbjct: 471 PEEDTHRKWEGWIESKLRILISNLEQTPNMKFAI-PYAKSFANKASAVNGGICTCFFMGL 529
Query: 178 SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
+ D G V +F I ++ + ++ Y+ +++LP FV +G
Sbjct: 530 QFNFSTAIGADKNVDLTGAVTSFTNLIKDWPGKLPTIEMKIHYIKKKNLPVFVKDEG 586
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ G+ I + ++ +G AEWS LF + FF + YLQV
Sbjct: 316 NVTASTQMIMTEEFKKGSEIVD-----KVIVGTAEWSELFAKHDFFHKHRYYLQVIASTG 370
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
++D + W G VESR RQL +K+E L+ HP+
Sbjct: 371 NSDLQIKWSGTVESRIRQLVMKLEY-VESLILAHPF 405
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 120/234 (51%), Gaps = 19/234 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
LV++FF V+T+W WP PV++ P ELGF+ WDPR N DR H MPIITPAY NS+
Sbjct: 262 LVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFHLMPIITPAYPQQNST 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS T V+ ++ Q G I + EI GKA W LFE FF Y++Y+ + A
Sbjct: 322 YNVSQSTKTVIEQELQGGLAITQ-----EIMQGKATWEKLFESSNFFGKYKHYIVLIASA 376
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNS--------- 171
+ DD L W G VES+ R L +E++ + L H YP K I PS P S
Sbjct: 377 GNEDDHLKWVGLVESKIRVLVGNLERNPHIKL-AHVYP-KSISPSTPLDGSEEEKTDEHS 434
Query: 172 -AFFWGLSRKEVGTSKECQ-QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCR 223
+F GL + +G + D Q V R ++ +EG I +V R
Sbjct: 435 TLWFIGLEFQPLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGMKIEAKHVKR 488
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 164/355 (46%), Gaps = 65/355 (18%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+PR P DRSHRMPIITPAY M +++
Sbjct: 258 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDRSHRMPIITPAYPAMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ G I + +I G +WSALF + FF Y YLQ+
Sbjct: 318 NVTESTQMIMTEEFKRGADIVD-----KIVFGSLQWSALFAKHDFFHKYRYYLQIIASTG 372
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----------- 170
+ D + W G VESR RQL +K+E + L HP+ + D + C N
Sbjct: 373 NPDLQIKWAGTVESRIRQLVMKLEY-VDALTLAHPFIKGF-DQTLHCLNDEEVRLCASGE 430
Query: 171 ------------------------SAFFWGLSR--KEVGTSKECQQFDFQGTVKNFRRGI 204
+ FF GL+ K+ G++ ++ D F + +
Sbjct: 431 VPEAVLRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGP-RRLDISYPTTEFTKLV 489
Query: 205 ---DNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH-RPSRHFNEQSGKPCEDVKMCQS 260
D Y G I ++ LP +VF +G K + + ++ N GK +
Sbjct: 490 KMWDKYDESSMG--IVVRHIKNSSLPDYVFEEGAKPNLKRAKSTNRGQGK-------SNN 540
Query: 261 CSSERQLKRKKEHEIKEVRPDKSVK---QAFISSEVPQPVSPGMTTEDPTNNSEV 312
+ ++ K++K++E+ DKS+ S++ QPVS T + T + V
Sbjct: 541 TTPDQPNKKQKKYEVF----DKSLAFFDICLASTKSDQPVSSLSTVQTSTAGTAV 591
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PVM+ PIE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 265 IVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ + I + I +GKA WS LF + FF Y YLQV
Sbjct: 325 NVTQSTQMIMTEEFKKASDIVD-----NIIVGKASWSDLFAKHDFFHKYRYYLQVIASTG 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D + W G VESR RQL +K+E L HP+
Sbjct: 380 GPDVQIKWSGTVESRIRQLVMKLEY-VESLALAHPF 414
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 9/238 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 279 LVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 338
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VSL T +M ++ + G I E +I LGK W LFE FF Y +Y+ + + +
Sbjct: 339 NVSLSTRSIMQDELKLGLSITE-----DIMLGKCGWEKLFETSHFFSKYRHYIVLLLSSN 393
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLS 178
+D L W G VES+ R L +E++ + L H P+ + P +P N + +F G+
Sbjct: 394 SPEDQLEWCGLVESKIRLLVGNLERNHHINL-AHVNPDSFQQPQEPDSNVLCTMWFIGVV 452
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 236
+ G +D R + +EG + YV R+ L S++ P K
Sbjct: 453 FAKTGNLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRKELTSYLSPSVLK 510
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 126/239 (52%), Gaps = 13/239 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +M+E+F+ G + + EI GKAEW LFE FF+ Y++Y+ + A+
Sbjct: 328 NVSTSTRTIMSEEFKYGLSVTD-----EILQGKAEWPKLFEPPSFFQKYKHYIVLTASAS 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF----FWGL 177
++ L W G VES+ R L +E++ L H P + + + F F G+
Sbjct: 383 TEENHLEWVGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRSENDFVCMWFIGI 441
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
K+V ++ +D Q R +N + ++G I ++V ++ L ++ P+
Sbjct: 442 IFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHQYLPPE 500
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 127/241 (52%), Gaps = 10/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M E F+ G I E EI +GKA W LFE FF Y++Y+ + +
Sbjct: 336 NVSVSTRTIMQEAFENGLSITE-----EIIMGKATWDKLFEPPNFFGKYKHYIVLLARSL 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLS 178
A+D L W G VES+ R L +E++ + L H P + P KP P S +F GL
Sbjct: 391 TAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLKPEPEGHCSMWFIGLL 448
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
+ +D + V + R + + ++G I +V R+ L ++V P K
Sbjct: 449 FAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPSLLKRE 508
Query: 239 R 239
R
Sbjct: 509 R 509
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 131/249 (52%), Gaps = 17/249 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 263 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M E F+ G I E EI +GKA W LFE FF Y++Y+ + +
Sbjct: 323 NVSISTRTIMQEAFENGLAITE-----EIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSL 377
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSR 179
A+D L W G VES+ R L +E++ + L H P + ++P S +F GLS
Sbjct: 378 TAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHCSMWFIGLSF 436
Query: 180 KEVGTSKECQQ---------FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+ S++ ++ +D + V R + + +EG I +V R+ L ++V
Sbjct: 437 SKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHVKRKDLNTYV 496
Query: 231 FPDGYKWHR 239
P K R
Sbjct: 497 SPSLLKRER 505
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 122/232 (52%), Gaps = 13/232 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G + + EI LG+ +WS LFE FF Y++Y+ + A+
Sbjct: 326 NVSISTRSVMVEEFKQGLSVTD-----EILLGRCDWSKLFEPPNFFHKYKHYIVLTASAS 380
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGL 177
+ L W G VES+ R L +E+++ L H P + C + S +F G+
Sbjct: 381 TEEHHLEWVGLVESKIRVLVGNLERNSFITL-AHVNPQSFPGNRDHCKDNEYVSMWFLGI 439
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+V ++ D Q R +N + ++G I ++V R+ L
Sbjct: 440 IFKKVENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMRIEATHVKRKQL 491
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 128/238 (53%), Gaps = 11/238 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +M+E+F+ G + + EI GKAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSTSTRTIMSEEFKYGLSVTD-----EILQGKAEWSKLFEPPHFFQKYKHYIVLTASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P + ++ S +F G+
Sbjct: 384 TEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENEFVSMWFIGII 443
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
K+V ++ +D Q R +N + + G I ++V ++ L ++ P+
Sbjct: 444 FKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQLNLYLPPE 501
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 106/181 (58%), Gaps = 8/181 (4%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+++FF VY QW W PV++ PIE G L F VW+P+ NP+D+ H MPIITP+Y CMNS+
Sbjct: 249 LLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMPIITPSYPCMNST 308
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ VS TL+ M +F+ G I + + E G W LFE FF Y NYLQV+I
Sbjct: 309 FNVSKTTLKDMKNEFERGASITQ-----KAENGLENWETLFEATDFFVRYSNYLQVEINT 363
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
++ D L W G+++S+ R L K+E L H YP+ + + +S F+ GL K
Sbjct: 364 SNEVDHLKWIGFIQSKVRFLIPKLEAVPG--LTIHIYPDYFHNNQGGAFSSYFYIGLEYK 421
Query: 181 E 181
+
Sbjct: 422 Q 422
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW+WP PV++ IE G L VW+PR P DR HRMPIITPAY M +++
Sbjct: 256 IVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T VMTE+F+ G+ + + I GK W+ LFE FF Y+ YLQV +
Sbjct: 316 NVTQSTQMVMTEEFRRGSEVVD-----RIFRGKTSWNELFEKNDFFHKYKYYLQVIASSG 370
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
AD L W+G VESR RQL +K+E LL HP+
Sbjct: 371 SADLQLKWQGTVESRLRQLIMKLEL-VPALLCAHPF 405
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 127/241 (52%), Gaps = 10/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 272 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTF 331
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M E F+ G I E EI +GKA W LFE FF Y++Y+ + +
Sbjct: 332 NVSVSTRTIMQEAFENGLSITE-----EIIMGKATWDKLFEPPNFFGKYKHYIVLLARSL 386
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLS 178
A+D L W G VES+ R L +E++ + L H P + P KP P S +F GL
Sbjct: 387 TAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLKPEPEGHCSMWFIGLL 444
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
+ +D + V + R + + ++G I +V R+ L ++V P K
Sbjct: 445 FAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPSLLKRE 504
Query: 239 R 239
R
Sbjct: 505 R 505
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 128/238 (53%), Gaps = 11/238 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +M+E+F+ G + + EI GKAEWS LFE FF+ Y++Y+ + A+
Sbjct: 326 NVSTSTRTIMSEEFKYGLSVTD-----EILQGKAEWSKLFEPPHFFQKYKHYIVLAASAS 380
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P + ++ S +F G+
Sbjct: 381 TEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGII 440
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
K++ ++ +D Q R +N + + G I ++V ++ L ++ P+
Sbjct: 441 FKKMENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQLNLYLPPE 498
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 32/252 (12%)
Query: 2 LVSRFFRVYTQWRW----PNPVMMCPIEMGEL-GFSVWDPRKNPKDRSHRMPIITPAYHC 56
+++RFF++Y WRW P PV++CPI+ G + VW+ ++ D+SH MPI+TPAY
Sbjct: 276 IINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWNQKR---DKSHLMPILTPAYPS 332
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS+Y VS TL ++ ++F GN+I + ++E G+A W+ L E FF Y+ YLQ+
Sbjct: 333 MNSTYNVSKSTLSLLKDEFARGNQIAQ-----KLESGEANWNKLLEKSDFFSRYQFYLQI 387
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--------------- 161
D A + ++ W+GW+ES+ R+L +EQ T + P+P +
Sbjct: 388 DCSAQNEEEHRKWEGWIESKLRKLISFLEQ-TPKMKFAIPFPKSFENKPTPAATTTAANG 446
Query: 162 ---IDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYF 218
D + ++FF GL + D V +F I ++ + ++
Sbjct: 447 EAVTDANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLIKDWAGKGPTMEMKV 506
Query: 219 SYVCRRHLPSFV 230
Y+ RR LP+FV
Sbjct: 507 HYIKRRQLPAFV 518
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 122/246 (49%), Gaps = 17/246 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LF+ FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRAVMVEEFKQGLAITD-----EILLVKAEWSKLFDAPNFFQKYKHYILLLASAP 132
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ + H P + PS+ F W GL
Sbjct: 133 TEKQRLEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPSPSENSEKEEFRTMWVIGL 191
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFV 230
K++ S+ +D Q R N ++ I +V R+ LPS V
Sbjct: 192 VFKKMENSENLSVDLTYDIQSFTDTVYRQAINSKMFETEIKIAAMHVKRKQLHQLLPSHV 251
Query: 231 FPDGYK 236
P K
Sbjct: 252 LPKKKK 257
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 123/246 (50%), Gaps = 17/246 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 250 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 309
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI LGKAEWS LF+ FF+ Y++Y+ + A
Sbjct: 310 NVSVSTRAVMIEEFKQGLAITD-----EILLGKAEWSKLFDAPNFFQKYKHYILLLASAP 364
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + PS+ F W GL
Sbjct: 365 TEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPRSFPAPSENMEKEEFRTMWVIGL 423
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL----PSFV 230
K++ S+ +D Q R N ++ I +V R+ L PS V
Sbjct: 424 VFKKMENSENLSVDLTYDIQSFTDTVDRQAINSKMFETEMKIAAMHVKRKQLHQLQPSHV 483
Query: 231 FPDGYK 236
P K
Sbjct: 484 SPKKKK 489
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 13/163 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM------GELGFSVWDPRKNPKDRSHRMPIITPAYH 55
+++RFF VY W+W NPV++C I+ G +GF VW+P NP+DR+H MPIITPA+
Sbjct: 272 IINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRAHLMPIITPAFP 331
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
MNS++ V+ TL+V+TE+ Q G+ + + EIE +A+WS L+ Y FFE +++++Q
Sbjct: 332 SMNSTHNVTQTTLRVITEELQRGSELVK-----EIENERAQWSDLWSPYMFFENHKHFIQ 386
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 158
V ++A W GW+ES+ R L K+E T LQ P+P
Sbjct: 387 VKMLANSEQAFQKWTGWIESKIRFLVRKLE--TFKGLQVRPWP 427
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 17/253 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 273 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLMPIITPAYPQQNSTF 332
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M E F+ G I E EI +GKA W LFE FF Y++Y+ + +
Sbjct: 333 NVSVSTRTIMQEAFENGLAITE-----EIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSL 387
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSR 179
A+D L W G VES+ R L +E++ + L H P + ++P S +F GL+
Sbjct: 388 SAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHCSMWFIGLAF 446
Query: 180 KEVGTSKECQQ---------FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+ S++ ++ +D + V R + + +EG I +V R+ L ++V
Sbjct: 447 SKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHVKRKDLHTYV 506
Query: 231 FPDGYKWHRPSRH 243
P K R + +
Sbjct: 507 SPSLLKKERKAEN 519
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 98/157 (62%), Gaps = 8/157 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +MTE+F+ G+ I + ++ +GKA WS LF + FF Y YLQV I +
Sbjct: 316 NVSASTQMIMTEEFKKGSEIVD-----KVIVGKANWSELFAKHDFFHKYRYYLQV-IAST 369
Query: 122 DADDLLT-WKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ +L T W G VESR RQL +K+E + L HP+
Sbjct: 370 GSQELQTKWAGTVESRIRQLVMKLEY-VDSLTLAHPF 405
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 137/281 (48%), Gaps = 23/281 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+V+RFFRV+ W WP PV + +E L W+P N D H MPIITPAY MNS+
Sbjct: 316 IVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINASDARHLMPIITPAYPSMNST 375
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI-V 119
+ VS+ TL+VMTE+F G ++ +IE+GK W LFE FF Y+ Y+Q+
Sbjct: 376 HNVSMSTLRVMTEEFARGMQVT-----LDIEVGKVGWPVLFEKNNFFTRYKTYIQISART 430
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-----IDPSKPCPNSAFF 174
+ D+ W+G+VES+ R L+ + G+ HPYP + + +P + F+
Sbjct: 431 EENQDEHRQWEGFVESKLRMF-LQWLESAPGVDYVHPYPKTFSQTDTTESGQPVYLTIFY 489
Query: 175 WGLS-RKEVGTSKECQQFDFQGTVKNFRRGIDNYR---VRREGRDIYFSYVCRRHLPSFV 230
+G+ +K+ GT + V++FR I N V D+ + R LP V
Sbjct: 490 FGMMFKKQEGTDPRV--IELGNIVRDFREAIKNQNASFVNNPRVDLVVLPMKRPQLPENV 547
Query: 231 FPDGYK---WHRPSRHFNE-QSGKPCEDVKMCQSCSSERQL 267
F G + RP + N + P V S S+ + +
Sbjct: 548 FEGGVRPAPTKRPKKDKNAPATSAPAGTVAAAPSTSAAQSI 588
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 134/241 (55%), Gaps = 16/241 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF ++++W+WP PV++ P +LG+ VWDPR N DR+H MPIITP Y NS++
Sbjct: 250 LIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITPVYPQQNSTF 309
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS TL ++ ++F+ I EI G++ WS +F+ FF Y +L + + A
Sbjct: 310 NVSHSTLAIIQDEFKTSLDIMG-----EILTGESSWSKIFQPSKFFTKYRYFLAITVFAN 364
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI---DPSKPCPNSAFFWGLS 178
++LL W+G VESR R L +E+ + + H P++++ D S+ P+S +F GL
Sbjct: 365 CDEELLEWRGLVESRLRFLPTSLEE-IECVQRSHLNPDQFVLPYDKSQGRPSSVWFVGLE 423
Query: 179 -RKEVGTSKECQQFDFQGTVKNFRRGIDN--YRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K GT DF +++F + + + + + G DI +++ R+ L +V PD
Sbjct: 424 ISKSNGT---VVNLDFSTHIRDFCLLVKSRAHTIFKAGMDIQVNHLKRKDLRDYV-PDEL 479
Query: 236 K 236
K
Sbjct: 480 K 480
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 140/298 (46%), Gaps = 24/298 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ + H P + P K P+ F W G
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAP-KESPDREEFRTMWVIG 440
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
L K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 441 LVLKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL--- 497
Query: 234 GYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS +++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 ------PSHVLQKRNKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 271 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 330
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 331 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 385
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 386 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 445
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 446 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL----- 500
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 501 ----PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 552
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M S++
Sbjct: 260 IVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHRMPIITPAYPSMCSTH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ G I + + +G A+WS LF + FF Y YLQ+
Sbjct: 320 NVTASTQMIMTEEFKRGADIVD-----RVIVGTAQWSELFAKHDFFHKYRYYLQIIASTG 374
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D D W G VESR RQL +K+E L+ HP+
Sbjct: 375 DPDLQNKWSGTVESRIRQLVMKLEY-VESLILAHPF 409
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + +W WP PV++ PIE G L VW+P+ +DRSHRMPIITPAY M +++
Sbjct: 256 IVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V T Q+M E+FQ G I + ++ LGKAEWSALF + FF+ Y YLQV +
Sbjct: 316 NVMQSTQQIMKEEFQRGCAIVD-----DVMLGKAEWSALFVKHDFFQRYRFYLQVVAASR 370
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D + W G V S+ RQL +++E + L HP+
Sbjct: 371 DLEMQNKWSGTVASKIRQLVMRLEY-VDALKLAHPF 405
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 132
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 133 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 192
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 193 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 247
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 248 ----PNHVLQKKKKHSTESVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 299
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 380 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 439
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 440 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 494
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 495 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 546
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V RR L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRRQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 498 ----PNHVLQKKKKHSAEGVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 18/275 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF ++++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T V+ E+ + G + EI G+++W LFE FF+ Y++Y+ +
Sbjct: 326 NVSTSTRAVVVEELKHGLAVTN-----EILQGRSDWPKLFEQPNFFQKYKHYIVLTASTY 380
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF----FWGL 177
+ L W G VES+ R L +E++ + H P + + C S + F G+
Sbjct: 381 TEEHHLEWVGLVESKIRVLVGNLERN-EFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGI 439
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
+++ +++ + +D Q R +N + +EG I +YV R+HL F P G
Sbjct: 440 IFRKLESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHLHYF-LPAG 498
Query: 235 YKWHRPSRHF----NEQSGKPCEDVKMCQSCSSER 265
R + SG C+ +S +S R
Sbjct: 499 TLQKRKKQSMLNISQNASGLRCKRASSNESLNSSR 533
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 299 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 358
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 359 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 413
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 414 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 473
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V RR L +
Sbjct: 474 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLL----- 528
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E V++ S L ++ P ++K + ++S
Sbjct: 529 ----PSHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVPSPTSAMKTSPLNS 580
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + +W WP PV++ PIE G L VW+PR P+DR+HRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRNHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V T Q+MTE+F+ G+ I + ++ G+ +WSALF + FF Y YLQV +
Sbjct: 316 NVMASTQQIMTEEFKRGSEIVD-----QVISGEVQWSALFAKHDFFFRYRFYLQVIASSP 370
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D D W G VES+ RQL +++E + L HP+
Sbjct: 371 DLDTQNKWSGTVESKIRQLVMRLEF-VDTLKLAHPF 405
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 154/337 (45%), Gaps = 34/337 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LF+ FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITD-----EILLLKAEWSKLFDAPNFFQKYKHYILLLASAP 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ + H P + PS+ F W GL
Sbjct: 380 TEKQRLEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAPSENSEKEEFRTMWVIGL 438
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K++ S+ +D Q R N ++ I +V R+ L +
Sbjct: 439 VFKKMENSENLSVDLTYDIQSFTDTVYRQAINSKMFETEMKIAAMHVKRKQLHQLL---- 494
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFI-SSEV 293
PS ++ E VK+ S L ++ + P + + + + SS +
Sbjct: 495 -----PSHVLPKKKKHSVEGVKLVSLNDSSIDLSVDSDNSMSVPSPTNATRTSPLNSSGL 549
Query: 294 PQ------PVSPGMTTEDPTN-----NSEVMSSGGHL 319
Q PVS +T T+ N+ +SGG L
Sbjct: 550 SQGNSPATPVSLSVTNTQATDVMVPQNNSTENSGGSL 586
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 24/298 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 69 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 128
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 129 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 183
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ + H P + P K P+ F W G
Sbjct: 184 TEKQRLEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAP-KESPDREEFRTMWVIG 241
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
L K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 242 LVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL--- 298
Query: 234 GYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 299 ------PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 350
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 18/275 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV++FF ++++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 404 LVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 463
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T V+ E+ + G + EI GK++W LFE FF+ Y++Y+ +
Sbjct: 464 NVSTSTRAVVVEELKHGLAVTN-----EILQGKSDWPKLFEQPNFFQKYKHYIVLTASTY 518
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF----FWGL 177
+ L W G VES+ R L +E++ + H P + + C S + F G+
Sbjct: 519 TEEHHLEWVGLVESKIRVLVGNLERN-EFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGI 577
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
+++ ++ + +D Q R +N + +EG I +YV R+HL F P G
Sbjct: 578 IFRKLENTESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHLHYF-LPAG 636
Query: 235 YKWHRPSRHF----NEQSGKPCEDVKMCQSCSSER 265
R + +G C+ +S +S R
Sbjct: 637 TLQKRKKQSILNISQNATGLRCKRASSNESLNSSR 671
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 132
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 133 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 192
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 193 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 247
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 248 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 299
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 398
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 399 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 458
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 459 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 513
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 514 ----PNHVLQKKKTHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 565
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 270 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 329
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 330 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 384
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 385 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 444
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 445 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 499
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 500 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 551
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 138/296 (46%), Gaps = 21/296 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V RR L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
H ++ K +V++ S L ++ + P ++K + ++S
Sbjct: 498 -----PNHVLQKKKKHSSEVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 548
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 97/164 (59%), Gaps = 7/164 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ PIE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ + G + +I LGK+ WSAL E + FF Y+ YL +
Sbjct: 313 HNITSSTQKVIMSELARGAEVMN-----QINLGKSSWSALLERHDFFHKYKFYLCIVAAT 367
Query: 121 ADAD-DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
+D + L W G VES+ R L LK+E T+G+ HPY + D
Sbjct: 368 TSSDEEHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSD 410
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGPAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 398
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 399 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 458
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 459 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 513
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 514 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 565
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 139/298 (46%), Gaps = 24/298 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KESPDREEFRTMWVIG 440
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
L K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 441 LVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL--- 497
Query: 234 GYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 ------PSHVLQKRKKHSTEGVKLAALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 138/296 (46%), Gaps = 21/296 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V RR L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
H ++ K +V++ S L ++ + P ++K + ++S
Sbjct: 498 -----PNHVLQKKKKHSSEVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 548
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 549
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 24/298 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ + H P + P K P+ F W G
Sbjct: 380 TEKQRLEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAP-KESPDREEFRTMWVIG 437
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
L K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 438 LVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL--- 494
Query: 234 GYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 495 ------PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 546
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 29 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 88
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 89 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 143
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 144 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 195
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 196 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 254
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 549
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 144/317 (45%), Gaps = 24/317 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 295 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 354
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 355 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 409
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 410 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 469
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 470 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 524
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFI----SS 291
P+ ++ E VK+ S L ++ + P + K + + SS
Sbjct: 525 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSS 580
Query: 292 EVPQPVSPGMTTEDPTN 308
+ +P +T TN
Sbjct: 581 QGRNSPAPAVTAASVTN 597
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 24/298 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ + H P + P K P+ F W G
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAP-KESPDREEFRTMWVIG 440
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
L K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 441 LVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL--- 497
Query: 234 GYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 ------PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 549
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 549
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 139/298 (46%), Gaps = 24/298 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 380 TEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KESPDREEFRTMWVIG 437
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
L K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 438 LVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL--- 494
Query: 234 GYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 495 ------PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 546
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 131 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 190
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 191 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 245
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N YI
Sbjct: 246 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYI-------- 297
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 298 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 356
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 327 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 386
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 387 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 441
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 442 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 501
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 502 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 556
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 557 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 608
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 93/156 (59%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M +++
Sbjct: 258 IVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPAYPAMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ G I + ++ +G A WS LF + FF Y YLQV
Sbjct: 318 NVTESTQMIMTEEFKKGADIVD-----KVIVGSASWSDLFAKHDFFHKYRYYLQVIASTG 372
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
++D + W G VESR RQL +K+E L HP+
Sbjct: 373 NSDLQIKWAGTVESRIRQLIMKLEY-VESLTLAHPF 407
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 101/166 (60%), Gaps = 11/166 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
+++S FFR+Y+QW+WP PV +CPI G VWDP +P+DR H MPIITPAY
Sbjct: 271 VVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP-TDPRDRRHLMPIITPAYPS 329
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRIC-EVRAYFEIE---LGKAEWSALFEHYPFFEAYEN 112
MNS+Y V+ TL++M E+F G +IC +V A + + +W L E FF Y++
Sbjct: 330 MNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGVSPRDWERLLEPSDFFARYKH 389
Query: 113 YLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 158
YLQ++I A + DDL W+G VESR R L ++E + HP+P
Sbjct: 390 YLQIEITAGNMDDLKKWRGHVESRLRLLVQRLE--VLPPVSVHPWP 433
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 93/156 (59%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M +++
Sbjct: 258 IVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPAYPAMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ G I + ++ +G A WS LF + FF Y YLQV
Sbjct: 318 NVTESTQMIMTEEFKKGADIVD-----KVIVGSASWSDLFAKHDFFHKYRYYLQVIASTG 372
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
++D + W G VESR RQL +K+E L HP+
Sbjct: 373 NSDLQIKWAGTVESRIRQLIMKLEY-VESLTLAHPF 407
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 150 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 209
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 210 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 264
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 265 TEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLV 324
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 325 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQL 375
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 134/292 (45%), Gaps = 20/292 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQA 287
P+ ++ E VK+ S L ++ + P + K +
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTS 545
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 134/292 (45%), Gaps = 20/292 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 380 TEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLV 439
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 440 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLL----- 494
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQA 287
PS ++ E +++ S L ++ P ++K +
Sbjct: 495 ----PSHVLQKKKKHSTEGIRLATLNDSSLDLSMDSDNSTSVPSPTSAMKTS 542
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 498 ----PNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M S++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAMCSTH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T ++TE+F+ G I + ++ +G A W+ LF + FF Y YLQV
Sbjct: 316 NVTQSTQMIVTEEFKKGADIVD-----KVIVGSATWADLFRKHDFFHKYRYYLQVIASTD 370
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ + + W G VESR RQL +K+E + L+ HP+
Sbjct: 371 NTETQIKWAGTVESRLRQLVMKLEY-VDSLILAHPF 405
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 395
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 396 TEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLV 455
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 456 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQL 506
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 498 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 148/336 (44%), Gaps = 30/336 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLNKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 443
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N + I ++ R+ L +
Sbjct: 444 LKKPENSEILSIDLTYDIQSFTDTVYRQAINSKTFEMDMKIDAMHLRRKELHQLL----- 498
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQ 295
H ++ P E V++ + S+ L E+ + P V + P
Sbjct: 499 -----PNHVLQKKKHPAEGVRL--TAVSDSSLGTDSENSMPVPSPTGLVTGSCPGRSSPA 551
Query: 296 PVSPGMTTEDPTNNSEVMS-------SGGHLVSEKG 324
P ++ T SEV S G ++SE G
Sbjct: 552 PAVLSVSLGSSTQPSEVASQPLSPSEGAGAVLSEGG 587
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 231 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 290
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 291 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 345
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 346 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 397
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 398 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 456
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 19 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 78
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 79 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 133
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 134 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 193
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 194 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRKQL 244
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 380 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 439
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 440 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 494
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 495 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 546
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF ++ QW+WP PV++ PIE G L VW+P+ P DR HRMPIITPAY M +++
Sbjct: 268 IVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VMT +F+ + + + +GK +W LF + FF Y+ YLQV +
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVD-----RVIIGKTDWCELFAKHDFFFKYKYYLQVIASSG 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIE 145
AD L W G VES+ RQL +K+E
Sbjct: 383 SADLQLKWHGTVESKIRQLVMKLE 406
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 384 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 443
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 444 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRKQLHQLL----- 498
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 499 ----PNHVLQKKKKHSMEGVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 550
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 133/290 (45%), Gaps = 20/290 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 285
P+ ++ E VK+ S L ++ + P + K
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATK 543
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 114/231 (49%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLL-----QCHPYPNKYIDPSKPCPNSAFFWG 176
L W G VES+ R L +E++ L Q P P + D + C G
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFCTMWVIGLG 443
Query: 177 LSRKEVGTSKECQ-QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
L + E +D Q R N ++ G I ++ R+ L
Sbjct: 444 LKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKEL 494
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 378
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 379 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 430
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 431 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 489
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 327 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 382 TEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLV 441
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 442 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQL 492
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGSKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 398
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 399 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 458
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 459 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 513
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 514 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 565
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 498 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGSKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ G I + ++ +G A WS LF + FF Y YLQ+
Sbjct: 316 NVTASTQMIMTEEFKKGADIVD-----KVIVGTATWSELFAKHDFFHKYRYYLQIIASTG 370
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D + W G VESR RQL +K+E L HP+
Sbjct: 371 DPALQIKWAGTVESRLRQLVMKLEF-VESLQLAHPF 405
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 145/317 (45%), Gaps = 24/317 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 361 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 420
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 421 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 475
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 476 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 535
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 536 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 590
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFI----SS 291
P+ ++ E V++ S L ++ + P ++K + + SS
Sbjct: 591 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 646
Query: 292 EVPQPVSPGMTTEDPTN 308
+ +P +T TN
Sbjct: 647 QGRNSPAPAVTAASVTN 663
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 137/297 (46%), Gaps = 22/297 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + P + F W GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFQAPKENPDKEEFRTMWVIGL 441
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 442 VFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHPLL---- 497
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 -----PSHVLQKKKKHSTEGVKLTPMNDSSLDLSMDSDNSMCVPSPTSAMKASSLNS 549
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 131/252 (51%), Gaps = 23/252 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + LGF VWDPR N +DR H MPIITPAY NS++
Sbjct: 280 LVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 339
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +VM +F G +I + EI LGKA W LFE FF Y +++ + + +
Sbjct: 340 NVSSSTRKVMLNEFNRGMQITD-----EIMLGKAGWDKLFEAPSFFFKYRHFIVLLVTSN 394
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTN-GLLQCHPY------PNKYID---PSKPCPNS 171
+ADD L W G VES+ R L +E++ + L +P N+ D K S
Sbjct: 395 NADDHLEWCGLVESKIRYLIQNLERNLHINLAHVNPKCFEQQEQNQKDDGGEGGKTTLCS 454
Query: 172 AFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNY----RVRREGRDIYFSYVCRRHLP 227
+F GL + E D +++NF + + +V ++G I +V R+ L
Sbjct: 455 LWFIGLEFER----SENLNVDLTESIQNFTDAVHKHAVHIKVLKDGMKIEARHVRRKQLN 510
Query: 228 SFVFPDGYKWHR 239
++ P+ K R
Sbjct: 511 QYLDPNLLKRER 522
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 378
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 379 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 430
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 431 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 489
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 378
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 379 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 430
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 431 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 489
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPTNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + ++G I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 492
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 378
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 379 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 430
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 431 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 489
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 288 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 347
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 348 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 402
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 403 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 454
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 455 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 513
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 130/265 (49%), Gaps = 20/265 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 326 NVSTSTRTVMVEEFKQGLAVTN-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 380
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P + S +F G+
Sbjct: 381 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVSMWFLGII 440
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
+ V ++ +D Q R +N + +EG I ++V ++ L ++
Sbjct: 441 FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL----- 495
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQS 260
P+ F ++ + +D+ S
Sbjct: 496 ----PAEIFQKKKKQSLQDINRSAS 516
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 378 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 437
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 438 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 492
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 493 TEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLV 552
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 553 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQL 603
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 116/232 (50%), Gaps = 13/232 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 326 NVSVSTRMVMIEEFKQGLAITH-----EILLNKAEWSKLFEAPSFFQKYKHYIVLLASAP 380
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P ++ P + F W GL
Sbjct: 381 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKEFRTMWVIGL 439
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 440 VLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFETGMKIAAMHLRRKEL 491
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 97/158 (61%), Gaps = 8/158 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V+RFF V +QW WP+PV++ PI G G +W+P+ P+DR HRMPIITPAY CM S
Sbjct: 264 IVNRFFAVLSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIYPQDRGHRMPIITPAYPCMCS 323
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ ++ T Q+M +F+ G + + EI G W+ALF+ + FF Y YLQ+
Sbjct: 324 THNITKSTAQIMMTEFKRGLAVTD-----EIATGTKPWAALFDKHDFFTRYRYYLQITAS 378
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ +A+ L W G VE+R RQL +K+E+ + HP+
Sbjct: 379 SPNAEIQLKWAGTVEARLRQLVMKVEE-VETVDLAHPF 415
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 117/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIILLASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLG 443
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 444 LKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL 494
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 120/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
+ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEEHQLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 93/157 (59%), Gaps = 6/157 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VSRFF + +W+WPNPV++ IE G L VW+P+ P DR+HRMPIITP Y M S+
Sbjct: 258 VIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAHRMPIITPNYPSMCST 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ VS T ++ + + + I + I +G A WS LF + FF Y YLQV
Sbjct: 318 HNVSQSTQMIIKHELRRASEIVD-----RIIMGSATWSELFAKHDFFHKYRYYLQVIAST 372
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+AD L W G VESR RQL +K+E + L+ HP+
Sbjct: 373 ENADLQLKWAGTVESRLRQLVMKLEY-VDSLVLAHPF 408
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 20/256 (7%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGEL----GFSVWDPRKNPKDRSHRMPIITPAYHC 56
MLV FF+++ W W PVM+ +++ G WD R N +R M IITPAY
Sbjct: 265 MLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQLMKIITPAYPA 324
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ VS TL+V+ +F+ G + ++ +G+A+W+ ++ FF Y+ YLQ+
Sbjct: 325 QNSTFNVSSSTLEVLKREFKRGKIVTG-----KVLIGEAKWTDVWSDVQFFAKYKTYLQL 379
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP-NSAFFW 175
+ A + +D W+GWV SR + L +E + G + HP K+ DP K + F+
Sbjct: 380 IVTADNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDKEVHCNVFF 439
Query: 176 GL---SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVR-------REGRDIYFSYVCRRH 225
GL G ++E ++ + ++NF+ + NY R + G + + ++
Sbjct: 440 GLFPNPSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKPGMGVQIKLLRKKD 499
Query: 226 LPSFVFPDGYKWHRPS 241
+PS+ P+G K+ +
Sbjct: 500 IPSWALPEGGKYEESA 515
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + ++G I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 492
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + ++G I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 492
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 132/287 (45%), Gaps = 20/287 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL----- 497
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDK 282
P+ ++ E VK+ S L ++ + P K
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPPK 540
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 139/297 (46%), Gaps = 23/297 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 326 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 380
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 381 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 440
Query: 179 RKEVGTSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K+ T E D +++F R N ++ I +V R+ L +
Sbjct: 441 FKK--TENENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---- 494
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 495 -----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 546
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 124/251 (49%), Gaps = 20/251 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIG 441
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSF 229
L K+ S+ +D Q R N ++ G I ++ R+ LP
Sbjct: 442 LGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKELHQLLPHH 501
Query: 230 VFPDGYKWHRP 240
V D K H P
Sbjct: 502 VLQDK-KAHSP 511
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 120/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQG-----LAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 326 NVSVSTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAP 380
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 381 TEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 440
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 441 LKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMFETGMKIAAMHLRRKEL 491
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 120/235 (51%), Gaps = 11/235 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P S +F G+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGII 441
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+ V ++ +D Q R +N + +EG I ++V ++ L ++
Sbjct: 442 FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 120/235 (51%), Gaps = 11/235 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P S +F G+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGII 441
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+ V ++ +D Q R +N + +EG I ++V ++ L ++
Sbjct: 442 FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 120/239 (50%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQG-----LAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 119/239 (49%), Gaps = 27/239 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + EI GK+ WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTN-----EILQGKSNWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPN 170
++ L W G VES+ R L +E++ T + +P N Y+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV-------- 433
Query: 171 SAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S +F G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 434 SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 120/235 (51%), Gaps = 11/235 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P S +F G+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGII 441
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+ V ++ +D Q R +N + +EG I ++V ++ L ++
Sbjct: 442 FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 126/243 (51%), Gaps = 8/243 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V++QW+WP PV++ LGF+VWDPR N +DR H MPIITPAY NS++
Sbjct: 277 LVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQDRYHLMPIITPAYPQQNSTF 336
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T Q++ E+F+ G ++ + +I L K W LFE FF Y++++ + + A
Sbjct: 337 NVSGSTRQIIMEEFKLGLQLTD-----DIMLSKQTWDKLFEPPLFFMKYKHFIVLLVSAE 391
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTN-GLLQCHPYPNKYIDPSKPCPN--SAFFWGLS 178
+D L W G VES+FR L +E++ + L +P ++ + S +F GL
Sbjct: 392 SPEDHLEWCGLVESKFRLLIGTLERNQHITLAHINPESFSLLESQRESNTHCSMWFIGLE 451
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
+ FD Q + + N + +EG + +V R+ L ++ P K
Sbjct: 452 FAKSENLNVNLTFDIQQFTETVQNHALNISMLKEGMKLEARHVKRKQLYQYLSPSLLKRE 511
Query: 239 RPS 241
R +
Sbjct: 512 RKT 514
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 137/296 (46%), Gaps = 20/296 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 275 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 334
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 335 NVSVSTRMVMVEEFKQGLAITD-----EILLSKGEWSKLFEAPNFFQKYKHYIVLLASAP 389
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 390 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 449
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 450 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL----- 504
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 505 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 556
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 22/291 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITH-----EILLNKAEWSKLFEAPSFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + P + F W GL
Sbjct: 383 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKETADKEEFRTMWVIGL 441
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K+ S+ +D Q R N ++ I ++ R+ L +
Sbjct: 442 VLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL---- 497
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 285
P+ ++ E V++ S L E+ + P ++K
Sbjct: 498 -----PNHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPTGTMK 543
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 119/206 (57%), Gaps = 17/206 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSV--WDPRKNPKDRSHRMPIITPAYHCMNS 59
L+S+FF + T W WP+PVM+ +E G + W+P+ NP DRSHRMP+ITP+Y M +
Sbjct: 233 LISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPTDRSHRMPVITPSYPSMCT 292
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ V+ T +++T + + +I + +I G A+W LFE + FF+ Y YLQ+ +V
Sbjct: 293 THNVTQSTQRIITGEIKQAAKIVD-----KIMAGSAKWPQLFEAHSFFKMYRQYLQITVV 347
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A + + L W G VE+R RQL +K+E + ++Q HP+ + + S+ C + S
Sbjct: 348 ADNYELQLKWTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGF---SETC-----LYRTST 398
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGID 205
+V S + +++D T+ + +D
Sbjct: 399 DKVTVS-QGEKYDNNRTIGKMKMEVD 423
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 22/291 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLNKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + P + F W GL
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKETADKEEFRTMWVIGL 442
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K+ S+ +D Q R N ++ I ++ R+ L +
Sbjct: 443 VLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL---- 498
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 285
P+ ++ E V++ S L E+ + P ++K
Sbjct: 499 -----PNHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPTGTMK 544
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 22/291 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITH-----EILLNKAEWSKLFEAPSFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + P + F W GL
Sbjct: 383 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKETADKEEFRTMWVIGL 441
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K+ S+ +D Q R N ++ I ++ R+ L +
Sbjct: 442 VLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL---- 497
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 285
P+ ++ E V++ S L E+ + P ++K
Sbjct: 498 -----PNHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPTGTMK 543
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 120/235 (51%), Gaps = 11/235 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 324 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 383
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 384 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 438
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P S +F G+
Sbjct: 439 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYVSMWFLGII 498
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+ V ++ +D Q R +N + ++G I ++V ++ L ++
Sbjct: 499 FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 553
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 118/231 (51%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 341 NVSTSTRTVMVEEFKQG-----LAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 395
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P + S +F G+
Sbjct: 396 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVSMWFLGII 455
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
+ V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 456 FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 506
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 7/169 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V+RFF + QW+WP PV++ P+E G L VW+P+ P DRSHRMPIITPAY M +++
Sbjct: 257 IVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPADRSHRMPIITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T ++M ++F+ G + I LG +WS LF FF+ +++YLQ+ +
Sbjct: 317 NVTESTRKIMIQEFKNGIDVAS-----NIILGSGQWSDLFVKSDFFQQFKHYLQITSSSY 371
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
++ L W G VE++ RQL LK+E + + HPY + D + C N
Sbjct: 372 SSETQLMWSGLVEAKLRQLVLKLET-VDMIELAHPYVKGF-DKAHYCLN 418
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 118/233 (50%), Gaps = 15/233 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIG 441
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
L K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 442 LGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAVHLRRKEL 494
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 118/233 (50%), Gaps = 15/233 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIG 441
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
L K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 442 LGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKEL 494
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 118/233 (50%), Gaps = 15/233 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 328 NVSISTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAS 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 383 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIG 440
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
L K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 441 LGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAVHLRRKEL 493
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 118/233 (50%), Gaps = 15/233 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 328 NVSISTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAS 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 383 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIG 440
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
L K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 441 LGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKEL 493
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 131/291 (45%), Gaps = 22/291 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLNKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + P + F W GL
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENVDKEEFRTMWVIGL 442
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K+ S+ +D Q R N ++ I ++ R+ L +
Sbjct: 443 VLKKPENSESLSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLKRKELHQLL---- 498
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 285
P+ ++ E V++ S L E+ + P VK
Sbjct: 499 -----PNHVLQKKETHLTEGVRLTAVNDSSLLLSVDSENSMSAPSPTGLVK 544
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 121/246 (49%), Gaps = 17/246 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLV FF++++ W+W PVM+ PI + G G VWD R N +R M I+TPAY NS
Sbjct: 269 MLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQNS 328
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ VS+ TL+V+ +F+ G + + I L K +W L+ F Y++YL V I
Sbjct: 329 TFNVSVSTLEVLKAEFRRGKEVTK-----NILLNKCKWEDLWIKTSFLTMYKHYLMVSIS 383
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSK-PCPNSAFFWGLS 178
A A+D W+GWV SR + L IE T G + HP +Y DP K + F GL
Sbjct: 384 AKTAEDFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPEKEENTHVILFLGLF 443
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRD-------IYFSYVCRRHLPSFVF 231
+ KE + V+ F+ + ++ R G +V R+ LP FV
Sbjct: 444 PSSL-KKKEKVAMNLNPAVEQFQMQVTSWMDRATGESNWVPGMQAMVRHVKRKDLPGFVR 502
Query: 232 P--DGY 235
DGY
Sbjct: 503 EEIDGY 508
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF ++ QW+WP PV++ IE G L VW+P+ P DR HRMPIITPAY M +++
Sbjct: 268 IVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VMT +F+ + + + +GK +WS LF + F+ Y+ YLQV +
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVD-----RVIIGKTDWSELFAKHDFYFKYKYYLQVIASSG 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIE 145
AD L W G VES+ RQL +K+E
Sbjct: 383 SADLQLKWHGTVESKIRQLVMKLE 406
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 115/231 (49%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 366 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 425
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 426 NVSVSTRMVMVEEFKQGLAITD-----EILLSKGEWSKLFEAPNFFQKYKHYIVLLASAP 480
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 481 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLV 540
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 541 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 591
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 22/297 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLNKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + P + F W GL
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENVDKEEFRTMWVIGL 442
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K+ S+ +D Q R N ++ I ++ R+ L +
Sbjct: 443 VLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL---- 498
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E V++ S L E+ + P ++K +++
Sbjct: 499 -----PNHVLQKKETHLTEGVRLTAVNDSSLLLSIDSENSMTAPSPTGTIKTGPLTA 550
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 114/231 (49%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITD-----EILLSKGEWSKLFEAPNFFQKYKHYIVLLASAP 395
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P P K + + GL
Sbjct: 396 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLV 455
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 456 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 506
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 115/232 (49%), Gaps = 13/232 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSISTRMVMIEEFKQGLAITH-----EILLRKAEWSKLFEAPSFFQKYKHYIVLLASAT 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + P + F W GL
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENTDMEKFRTMWVIGL 442
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 443 VLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEVGMKITAMHLRRKEL 494
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 113/232 (48%), Gaps = 21/232 (9%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFF +Y W+WP PV + + + DR H MPII P + S
Sbjct: 289 MLVSRFFWIYAHWQWPTPVTLVETQPDH---------ADGSDRHHHMPIIIPVHPYSCCS 339
Query: 61 YKVSLGTLQVMTEQFQCG-NRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
Y V+ TLQ + +F G + I ++ + +W+ LFE +PF +YE ++Q+ +
Sbjct: 340 YNVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWNILFERFPFCSSYEYFIQIYVT 399
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS- 178
A+D DD +W+GWVESRFR L LK E+ C P P Y D + P+ F WGL
Sbjct: 400 ASDEDDFRSWRGWVESRFRHLLLKFEKLPA---YCDPNPYPYFDKNVKEPHCYFLWGLKL 456
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
RK + D FR + N R G D++ + + R LPSF
Sbjct: 457 RKNISV-------DMADLEDEFRLYLSNGYEGRPGCDVHLTLLNRFQLPSFA 501
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 114/231 (49%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITD-----EILLSKGEWSKLFEAPNFFQKYKHYIVLLASAP 395
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P P K + + GL
Sbjct: 396 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLV 455
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 456 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 506
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 114/231 (49%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITD-----EILLSKGEWSKLFEAPNFFQKYKHYIVLLASAP 395
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P P K + + GL
Sbjct: 396 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLV 455
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 456 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 506
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 127/246 (51%), Gaps = 33/246 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++RFF+VY W+WP PV++ +E G L VW+ ++ D++H MPI+TPAY MNS+
Sbjct: 286 IINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAKR---DKAHLMPILTPAYPMMNST 342
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS T+Q++ +F G I +IE ++ ++AL E FF Y Y+Q+D A
Sbjct: 343 YNVSKSTMQLLKNEFVRGAEITR-----KIETNESTYNALLEKSDFFTRYRFYIQIDCSA 397
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID-------PSKPCPNSAF 173
+ +D W+GW+ES+ R L +E T + P+P + + P + C + F
Sbjct: 398 GNEEDHRKWEGWIESKLRFLISNLEM-TPKMKYAVPFPKSFSNLIHKESHPDQIC--TTF 454
Query: 174 FWGL---------SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRR 224
F GL + K V +K + F T+K + R N DI Y+ ++
Sbjct: 455 FMGLVFNFPTTPGADKSVDLTKAVSE--FTSTIKEWLRTQPNPETM---ADIKVQYIKKK 509
Query: 225 HLPSFV 230
LPSF+
Sbjct: 510 QLPSFI 515
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 14/213 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI LGKAEWS LF+ FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITD-----EILLGKAEWSKLFDAPNFFQKYKHYILLLASAP 379
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + PS+ F W GL
Sbjct: 380 TEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPSENTEKEEFRTMWVIGL 438
Query: 178 SRKEVGTSKECQ---QFDFQG-TVKNFRRGIDN 206
K++ S+ +D Q T +R+ I++
Sbjct: 439 VFKKMENSENLSVDLTYDIQSFTDTVYRQAINS 471
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 114/231 (49%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITD-----EILLSKGEWSKLFEAPNFFQKYKHYIVLLASAP 395
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P P K + + GL
Sbjct: 396 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLV 455
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I +V R+ L
Sbjct: 456 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 506
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 129/274 (47%), Gaps = 19/274 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIG 441
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSF 229
L K+ S+ +D Q R N ++ G I ++ R+ LP
Sbjct: 442 LVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKELHQLLPHH 501
Query: 230 VFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSS 263
V D SR + + + C++ S
Sbjct: 502 VLQDKKAQATESRRLTDLNDNSFDLSAGCENSMS 535
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 137/298 (45%), Gaps = 22/298 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRK--NPKDRSHRMPIITPAYHCMNS 59
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSDRYHLMPIITPAYPQQNS 77
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
+Y VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ +
Sbjct: 78 TYNVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLAS 132
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
A L W G VES+ R L +E++ T + +P +P K + + G
Sbjct: 133 APTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIG 192
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
L K+ S+ +D Q R N ++ I +V R+ L +
Sbjct: 193 LVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL--- 249
Query: 234 GYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 250 ------PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 301
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 261 IVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAHRMPIITPAYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T +MTE+F+ + I + ++ + KA WS LF + FF Y YLQV
Sbjct: 321 NVTQSTQMIMTEEFKKASEIVD-----KVIINKASWSDLFARHDFFHKYRYYLQVIASTG 375
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ + W G VESR RQL +K+E L HP+
Sbjct: 376 SPELQVKWSGTVESRVRQLVMKLEY-VESLALAHPF 410
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 129/248 (52%), Gaps = 24/248 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY QW W PVM+C I+ G + F VWDPR NP DR H MP+ITPA+
Sbjct: 262 LIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRNNPTDRQHLMPVITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ ++L T +++T++F+ N + +V A + K W + E F +++++L +
Sbjct: 322 MNSTHNITLTTKRILTDEFKRANDLLKVNA--KGAQMKNIWERVLEKEDMFASHKHFLVI 379
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP----YPNKYIDPSKPCPNSA 172
+++A W+GW+ SR R L KIE N L++ P Y +K D + S
Sbjct: 380 EVLATTEHVHGKWEGWIGSRMRFLIKKIETVPNILVRPWPEFFKYEHKEWDYA-----SC 434
Query: 173 FFWGLSRKEVGTSKECQQ-----FDFQGTVKNFRRGIDNYRVRREGRD---IYFSYVCRR 224
F+G KE + FD + ++K F+ I+++ +D + Y+
Sbjct: 435 VFFGFKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEMEAYKDQIAVNIRYLKNS 494
Query: 225 HLPSFVFP 232
LP FV P
Sbjct: 495 QLPHFVNP 502
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW+WP PV++ IE G L VW+P+ P DR HRMPIITPAY M +++
Sbjct: 268 IVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VMT +F+ + + + +GK WS LF + FF Y+ YLQV +
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVD-----RVIIGKTHWSELFAKHDFFFKYKYYLQVIASSG 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIE 145
AD L W G VES+ RQL +K+E
Sbjct: 383 SADLQLKWHGTVESKIRQLVMKLE 406
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 134/297 (45%), Gaps = 41/297 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ P + LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 279 LLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMPIITPAYPQQNSTF 338
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T V+ E+F+ G I + EI LGK W LFE FF Y++++ + +A
Sbjct: 339 NVSSSTRTVIMEEFRLGLAITD-----EIMLGKCGWERLFEAANFFSRYKHFIVLLASSA 393
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--------------IDPSKP 167
+ D L W G VES+ R L +E++ + + H P Y + P P
Sbjct: 394 NTLDQLPWCGLVESKIRHLITTLERNQH-ITIAHVNPECYNSVPLNTNNGHPLALPPGTP 452
Query: 168 CPN--------------------SAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNY 207
S +F GL + + + +D K +N
Sbjct: 453 VQTEEHGAAEVKNDKGEIVANVCSMWFIGLVFDKTNVNVDL-TYDISSFTKAVHYQAENT 511
Query: 208 RVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSE 264
V REG I +V R+ L ++ P + + ++ NE + K S++
Sbjct: 512 NVLREGMTIEARHVRRKQLHQYLSPSLLRREKVNKRKNETLAVHTKKAKRVSESSAD 568
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 28/256 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + LGF VWDPR N +DR H MPIITPAY NS++
Sbjct: 336 LVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 395
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +VM +F G +I + EI L KA W LFE FF Y +++ + + +
Sbjct: 396 NVSSSTRKVMLNEFNRGMQITD-----EIMLSKAGWDKLFEAPSFFFKYRHFIVLLVTSN 450
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP-------------NKYIDPSKPC 168
+ADD L W G VES+ R L L +E++ + L H P + D S+
Sbjct: 451 NADDHLEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQNQTERQRESDGSRAS 509
Query: 169 PN-SAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVR----REGRDIYFSYVCR 223
S +F GL + E D ++++F + + V ++G I +V R
Sbjct: 510 TLCSLWFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEARHVRR 565
Query: 224 RHLPSFVFPDGYKWHR 239
+ L ++ P+ K R
Sbjct: 566 KQLSQYLDPNLLKRER 581
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 117/238 (49%), Gaps = 12/238 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPEKEEFRTMWVIGLV 443
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
K+ S+ +D Q R N ++ I ++ R+ L PD
Sbjct: 444 LKKPENSEILSIDLTYDIQSFTDTVYRQAINTKMFEMDMKIAAMHLKRKELHQL-LPD 500
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIG 441
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
L K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 442 LVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL 494
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 7/164 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ PIE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T +V+ + + G + +I LGK WS LF+ + FF Y+ YL V
Sbjct: 313 HNITSSTQKVILSELEKGAEVVR-----QINLGKKSWSDLFDRHDFFHHYKFYLCVVAAT 367
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
A ++ L W G +ES+ R L LK+E T G+ HPY + D
Sbjct: 368 VASDEEHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSD 410
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIG 441
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
L K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 442 LVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL 494
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 115/226 (50%), Gaps = 11/226 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P S +F G+
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGII 441
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYV 221
+ V ++ +D Q R +N + +EG I ++V
Sbjct: 442 FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHV 487
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 139/312 (44%), Gaps = 25/312 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P P K + + GL
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLV 443
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 235
K+ S+ +D Q R N ++ I ++ R+ L +
Sbjct: 444 LKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHLKRKELHQLL----- 498
Query: 236 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQ 295
P+ ++ E V++ + R L E P S+ A + VP
Sbjct: 499 ----PNHVLQKKKTLSTEGVRLTALDAGSRDLSVGSESS----TPVSSLPAASQTGPVPG 550
Query: 296 PVSPGMTTEDPT 307
+PG + P
Sbjct: 551 S-APGGNSRGPA 561
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 11/237 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI---EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
L+ +FF + +W WP PV++ + L F VWDPR N DR H MPIITPAY N
Sbjct: 266 LLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDRFHLMPIITPAYPQQN 325
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI 118
S++ V+L T +MTE+ + G I V +E G+ EW ALFE FF+ Y++Y+ +
Sbjct: 326 STFNVTLSTRSIMTEELKDGLEI--VSKIYE---GREEWGALFEPSNFFQKYKHYIVLTA 380
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIEQDT-NGLLQCHPYPNKYIDPSKPCPNSAFFWGL 177
A + D L W G+VES+ R L +E++ L HP P ++ S +F GL
Sbjct: 381 SAVEEKDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHPSPLGPLNESDGEYLCRWFIGL 440
Query: 178 SRKEVGTSKECQQ--FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFP 232
+ ++ + FD Q + + + ++G + +V RR L +V P
Sbjct: 441 TFVKIENQNQNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKHVKRRQLDLYVPP 497
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW+WP PV++ IE G L VW+P+ P DR HRMPIITPAY M +++
Sbjct: 268 IVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VMT +F+ + + + +GK W LF + FF Y+ YLQV +
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVD-----RVIIGKTNWDELFAKHDFFFKYKYYLQVIASSG 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIE 145
AD L W G VES+ RQL +K+E
Sbjct: 383 SADLQLKWHGTVESKIRQLVMKLE 406
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIALLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
L W G VES+ R L +E++
Sbjct: 383 TEKQHLEWVGLVESKIRILVGSLEKN 408
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 30/257 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + LGF VWDPR N +DR H MPIITPAY NS++
Sbjct: 330 LVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 389
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +VM +F G +I + +I +GK W LFE FF Y +++ + + ++
Sbjct: 390 NVSSSTRKVMLMEFNRGMQITD-----DIMMGKQMWDKLFEAPSFFYRYRHFIVLLVTSS 444
Query: 122 DADDLLTWKGWVESRFRQLTLKI-------------------EQDTNGLLQCHPYPNKYI 162
+ADD L W G VES+ R L + EQ+ L +
Sbjct: 445 NADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNPAATLNAGGGADANQ 504
Query: 163 DPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVC 222
P+ C S +F GL + E D ++++F + + + ++G I +V
Sbjct: 505 TPAAFC--SLWFIGLEFERT----ENLNVDLTESIQSFTDSVHKHALLKDGMKIEARHVR 558
Query: 223 RRHLPSFVFPDGYKWHR 239
R+ L S++ + K R
Sbjct: 559 RKQLASYLDANLLKRER 575
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 119/234 (50%), Gaps = 17/234 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA------FFW 175
++ L W G VES+ R L +E++ + H P + P N A +F
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERN-EFITLAHVNPQSF--PGNKEHNKANNYVSMWFL 438
Query: 176 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
G+ + V ++ +D Q R + + ++G I ++V ++ L
Sbjct: 439 GIIFRRVEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQL 492
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 119/234 (50%), Gaps = 17/234 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 259 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 318
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 319 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 373
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA------FFW 175
++ L W G VES+ R L +E++ + H P + P N A +F
Sbjct: 374 TEENHLEWVGLVESKIRVLVGNLERN-EFITLAHVNPQSF--PGNKEHNKANNYVSMWFL 430
Query: 176 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
G+ + V ++ +D Q R + + ++G I ++V ++ L
Sbjct: 431 GIIFRRVEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQL 484
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FFR+ +QW WP PV++ PI+ G L VW+P+ P D++HRMPIITPAY M ++
Sbjct: 253 VIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPIITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T V+ + I + +I GK WSALFE + FF Y YL V +
Sbjct: 313 HNITPSTQTVILREMARAGLIVD-----DIMAGKKPWSALFEKHDFFHRYRYYLTVTAAS 367
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
AD L W G VES+ R ++E + + HP+
Sbjct: 368 KTADSQLKWSGLVESKLRHFVTRLEL-VDAITLAHPF 403
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 165 IVSRFFIIMYQWTWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 224
Query: 62 KVSLGTLQVMTEQFQCG-------NRICEVRAYFEIE----LGKAEWSALFEHYPFFEAY 110
V+ T +MTE+F+ G R A EI +G A+WS LF + FF Y
Sbjct: 225 NVTASTQMIMTEEFKKGQLEFYSPGRYLLFLAGSEIVDRVIVGSADWSELFSKHDFFHKY 284
Query: 111 ENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
YLQV ++ + W G VESR RQL +K+E + L HP+
Sbjct: 285 RYYLQVIASTGSSELQIKWAGTVESRIRQLVMKLEY-VDSLTLAHPF 330
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FF++Y QW+WP PV++ PIE G L +W+P+ +DR HRMP+ITPAY M ++
Sbjct: 1215 VIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRMPVITPAYPSMCAT 1274
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +++ ++ Q G I +I+ GK W LF + FF AY+ YL V
Sbjct: 1275 HNITASTQKIILKEMQRGLEIMN-----DIQFGKRTWKDLFAKHDFFFAYKFYLTVITAT 1329
Query: 121 ADA-DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D+ + L W G VES+ R L K+E NG++ HPY
Sbjct: 1330 RDSYEAHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPY 1366
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 101/163 (61%), Gaps = 13/163 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM------GELGFSVWDPRKNPKDRSHRMPIITPAYH 55
+++RFF +Y W+W NPV++C I+ G +GF VW+P NP+DR+H MPIITPA+
Sbjct: 268 IINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQDRAHVMPIITPAFP 327
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
MNS++ V+ TL V+T++ Q RI + +IE KA W ++ + FFE +++++Q
Sbjct: 328 SMNSTHNVTHTTLGVITDELQRAYRIIQ-----DIENDKATWHDVWSPFLFFEKHKHFIQ 382
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 158
V +++ + W GW+ES+ R L K+E T LQ P+P
Sbjct: 383 VKMLSNNEQAFHKWIGWIESKLRFLVRKLE--TFKGLQVRPWP 423
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 118/243 (48%), Gaps = 16/243 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCP-IEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+ +FF +Y W WPNP+ + P I +LGF W+P+ PKDR H MPIITP Y +NSS
Sbjct: 253 LLIKFFHLYHLWNWPNPLSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYPSINSS 312
Query: 61 YKVSLGTLQVMTEQFQCGN-RICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
Y V TL VM +F+ + ++ VRA WS L FF+ Y ++LQV I
Sbjct: 313 YNVMSSTLDVMKTEFKNASLQVSNVRA------KVLSWSELLTEASFFDKYRHFLQVQIS 366
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-IDPSKPCPNSAFFWGLS 178
+ D +D W WVESR R +++E ++ P+ + K S FF L
Sbjct: 367 SEDEEDFGRWVTWVESRLRTFFIRLE--AIPFVRIRPFARFFNFQELKGAYISWFFVALD 424
Query: 179 RKEVGTSKECQQ-----FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
+ ++ Q DF V+ F +D + R D+ +V R +P++V
Sbjct: 425 FQRPEDKRQNAQEPELTIDFSDAVRAFANHVDQWEERNSTMDLEVKHVVRSQIPAWVIDA 484
Query: 234 GYK 236
Y+
Sbjct: 485 TYR 487
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M +++
Sbjct: 254 IVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATH 313
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T +V+ + G+ I + EI GK WS LFE + FF Y+ YL V +
Sbjct: 314 NITSSTQKVILAELSRGSSIMQ-----EIHAGKKTWSDLFEKHSFFYKYKFYLCVVAASI 368
Query: 122 D-ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D A++ W G++ES+ RQL LK+E G+ HPY
Sbjct: 369 DSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPY 404
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M +++
Sbjct: 254 IVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATH 313
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T +V+ + G+ I + EI GK WS LFE + FF Y+ YL V +
Sbjct: 314 NITSSTQKVILAELSRGSSIMQ-----EIHAGKKTWSDLFEKHSFFYKYKFYLCVVAASI 368
Query: 122 D-ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D A++ W G++ES+ RQL LK+E G+ HPY
Sbjct: 369 DSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPY 404
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 130/255 (50%), Gaps = 27/255 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + LGF VWDPR N +DR H MPIITPAY NS++
Sbjct: 270 LVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 329
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +VM +F G +I + +I +GK W LFE FF Y +++ + + ++
Sbjct: 330 NVSSSTRKVMLMEFNRGMQITD-----DIMMGKQMWEKLFEAPSFFYRYRHFIVLLVTSS 384
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID------------PSKPCP 169
+ADD L W G VES+ R L +E++ + L H P Y KP P
Sbjct: 385 NADDHLEWCGLVESKIRYLIQNLERNQHINL-AHVNPKCYEQHEQNSATTLNGADGKPTP 443
Query: 170 N-SAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVR----REGRDIYFSYVCRR 224
S +F GL + E D ++++F + + V ++G I +V R+
Sbjct: 444 FCSLWFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEARHVRRK 499
Query: 225 HLPSFVFPDGYKWHR 239
L ++ P+ K R
Sbjct: 500 QLTQYLDPNLLKRER 514
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 130/272 (47%), Gaps = 42/272 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 289 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 348
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +VM +F G I + EI LG+A W LFE FF Y +++ + + +
Sbjct: 349 NVSESTKKVMLTEFTRGMNITD-----EIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQ 403
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY------------------ID 163
ADD L W G VES+ R L +E++ + L H P + D
Sbjct: 404 TADDHLEWCGLVESKIRLLIGNLERNPHIAL-AHVNPKCFELKKGESANNSQNNSGNEDD 462
Query: 164 PSKPCPNSA----------FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGID----NYRV 209
+P PN A +F GL + E D +++NF + N ++
Sbjct: 463 LKQPPPNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVIMHGVNIKM 518
Query: 210 RREGRDIYFSYVCRRHLPSFVFPDGYKWHRPS 241
+EG I +V R+ L ++ D K R S
Sbjct: 519 LKEGMAIDARHVKRKQLTVYLDADFLKRERKS 550
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 130/272 (47%), Gaps = 42/272 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 288 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 347
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +VM +F G I + EI LG+A W LFE FF Y +++ + + +
Sbjct: 348 NVSESTKKVMLTEFTRGMNITD-----EIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQ 402
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY------------------ID 163
ADD L W G VES+ R L +E++ + L H P + D
Sbjct: 403 TADDHLEWCGLVESKIRLLIGNLERNPHIAL-AHVNPKCFELKKGESANNSQNNSGNEDD 461
Query: 164 PSKPCPNSA----------FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGID----NYRV 209
+P PN A +F GL + E D +++NF + N ++
Sbjct: 462 LKQPPPNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVIMHGVNIKM 517
Query: 210 RREGRDIYFSYVCRRHLPSFVFPDGYKWHRPS 241
+EG I +V R+ L ++ D K R S
Sbjct: 518 LKEGMAIDARHVKRKQLTVYLDADFLKRERKS 549
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 114/231 (49%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR +P DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITH-----EILLSKAEWSKLFEAPSFFQKYKHYIVLLASAP 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P P K + + GL
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLV 443
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N ++ I ++ R+ L
Sbjct: 444 LKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLKRKEL 494
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 7/164 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y+QW WP PV++ IE G L VW+PR P DRSHRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T ++ +F+ G I +I +GK EW LF + FF Y+ YL V
Sbjct: 313 HNITSSTQAIIVSEFKRGAEIMN-----DISIGKKEWGDLFARHEFFFRYKFYLCVVAST 367
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
A++ L W G VES+ R L K+E T G+ HPY + D
Sbjct: 368 KGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 120/242 (49%), Gaps = 19/242 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V +FF V+ +W WP PV++ E LG + VW+P+ NP D H MPIITPAY NS
Sbjct: 258 IVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIITPAYPQQNS 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ V+ T VM +F+ G IC +I++GK W LFE FF Y++Y+ +
Sbjct: 318 TFNVTKSTRDVMLNEFRRGLDICR-----DIDVGKLSWDILFEPIKFFSLYKHYIVICAT 372
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGL 177
A D+D LL W G VES+ R L K+E + N + H P Y I P + +F GL
Sbjct: 373 AIDSDLLLKWSGLVESKIRILIGKLEDNEN-IKIAHVNPTSYPRIVPDSTDSHLMWFIGL 431
Query: 178 ------SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
+ + E Q F VK+ + + R G + + RR L ++
Sbjct: 432 EFCVGPGGVNITLTYEIQMF-INSVVKS--PALQSSPDLRNGTQLDVKHARRRDLSDYLS 488
Query: 232 PD 233
PD
Sbjct: 489 PD 490
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 254 VIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++ G+ I +I G WS LF+ + +F AY+ YL V
Sbjct: 314 HNITSSTQKVILKELSRGSSIMN-----DINTGNKTWSDLFKRHEYFHAYKFYLCVVAAT 368
Query: 121 AD-ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D ++ W G+VESR RQL LK+E T+G+ HPY
Sbjct: 369 VDTSEQHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPY 405
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 9/222 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++++FFR+ +QW+WP PV++ PIE G L VW+P+ D++HRMPIITPAY M S+
Sbjct: 309 VVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHRMPIITPAYPSMCST 368
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ + I + +I G WS LF + FF Y+ YL + +
Sbjct: 369 HNITESTQKVIINEMNRAGDIAD-----KILNGTLPWSTLFAKHTFFHQYKYYLVIVAAS 423
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
A+ L W G VES+ RQL L++E + + HP+ NK D C G++
Sbjct: 424 KSAEMQLKWSGLVESKVRQLVLRLEY-VDEIKLAHPF-NKSTDSLHYCKTEEEANGVAHG 481
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVC 222
E+ S + + Q T+K N ++ D+ YV
Sbjct: 482 EL-VSTRMENINMQQTIKEM-ESTSNMDMKNSQSDMILVYVT 521
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 7/168 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FFR+ QW WP P+++ PIE G L +W+P+ P D++HRMPIITPAY M ++
Sbjct: 253 VIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++L T ++ + I + +I + WSALF+ + FF Y++YL + A
Sbjct: 313 HNITLSTQTIILREMVRAGEIAD-----QIMVKALPWSALFQKHDFFHRYKHYLTITAAA 367
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 168
A+ L W G VES+ R L ++E + + HP+ NK D C
Sbjct: 368 KTAEAQLKWAGLVESKLRHLVTRLEL-VDAIALAHPF-NKGFDKVYNC 413
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 137/291 (47%), Gaps = 24/291 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGEL------GFSVWDPRKNPKDRSHRMPIITPAYH 55
L+ FF + W WP+PVM+ P + VWDPR+N +D+ H MPIITP Y
Sbjct: 346 LLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARPVWDPRENYRDKLHVMPIITPCYP 405
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICE--VRAYFEIELGKAEWSALFEHYPFFEAYENY 113
MNSS+ V L+ M ++F+ R+ + E GK WS+LFE FF + Y
Sbjct: 406 SMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATGEDGKKGWSSLFERSGFFGQHGAY 465
Query: 114 LQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF 173
L+VD+ A D+ L W G E+R R L +E D ++ +P+ Y +K S+F
Sbjct: 466 LRVDVAATTEDEFLRWFGLCEARMRLLIAGLESDE---IRAYPFARFYRRDTKEEYVSSF 522
Query: 174 FWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
F L R G ++ + + V + ++++ R G D+ + R LP FVF D
Sbjct: 523 FVAL-RFASGVDRDVR---WGERVSEYLHVVNSFEGRTAGMDLRLELLKRADLPRFVF-D 577
Query: 234 GYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSV 284
G S + E V+M + L +K+ +EV P +++
Sbjct: 578 G------SEMLRRDGAEGGEGVRMEARATP--SLATRKKAADREVSPSENI 620
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 101/175 (57%), Gaps = 12/175 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y QW WP PV++ PIE G L VW+P+ P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +++ ++F+ G I +I + K+ WS L + FF Y+ YL IVA
Sbjct: 313 HNITSSTQKIILDEFKRGIDIMS-----QISMNKSTWSDLLARHTFFYKYKFYLC--IVA 365
Query: 121 A---DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA 172
A ++D L W G VESR R L K+E T G+ HPY + + S C N A
Sbjct: 366 ATQGSSEDHLKWGGMVESRLRLLIQKLEM-TEGIEIAHPYVKPF-ENSYACENQA 418
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 116/233 (49%), Gaps = 15/233 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV ++F V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E F+ G I EI L KA WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEVFKQGLAITH-----EILLTKAVWSKLFEAPSFFQKYKHYIVLLASAS 383
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--G 176
L W G VES+ R L +E++ L H P + P K P+ F W G
Sbjct: 384 TEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIG 441
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
L K+ S+ +D Q R N ++ G I ++ R+ L
Sbjct: 442 LGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKEL 494
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTG-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
++ L W G VES+ R L +E++
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERN 407
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ + G+ I + +I GK WS LFE + FF Y+ YL V
Sbjct: 313 HNITSSTQKVILAELSRGSSIMQ-----DIHAGKKSWSDLFEKHCFFYKYKFYLCVVAAT 367
Query: 121 AD-ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D A++ W G++ES+ RQL LK+E G+ HPY
Sbjct: 368 IDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPY 404
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 130/247 (52%), Gaps = 28/247 (11%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE-MGELGFS---------VWDPRKNPKDRSHRMPII 50
+L+++FF +Y +W+WPN V + ++ + E + VW+P NP+D++H MPII
Sbjct: 254 VLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMPII 313
Query: 51 TPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAY 110
TPAY MNSSY V ++++ E+ G RI + I LG A W+ LFE FF +
Sbjct: 314 TPAYPAMNSSYNVGEPQMRLIREEIARGWRITK-----GISLGIANWANLFERSDFFWRF 368
Query: 111 ENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY----PNKYI-DPS 165
E Y+QVDI A A D W GW+ESR R + ++Q +++ +P+ PN Y+ +
Sbjct: 369 ELYVQVDISARSAADHRLWFGWIESRMRSFLVCLDQID--MVEAYPFVNPLPNPYLTNAE 426
Query: 166 KPCPNSAFFWGLSRKEV--GTSKECQQFDFQGTVKNFRRGID---NYRVRREGRDIYFSY 220
++FF GL EV G S D ++F ++ + R RREG ++
Sbjct: 427 TGAVGNSFFIGLGFPEVANGRSPSGVPVDLTPAWRDFMMRVELWGDRRRRREGMEVDVKA 486
Query: 221 VCRRHLP 227
V HLP
Sbjct: 487 V-NVHLP 492
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 126/273 (46%), Gaps = 15/273 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +M E+F+ G I + EI KA+WS LFE FF+ Y++Y+ + A
Sbjct: 327 NVSASTRAIMVEEFKRGLAITD-----EILQNKADWSKLFEAPNFFQKYKHYIVLLASAQ 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GL 177
L W G VES+ R L +E++ L H P + P + F W G+
Sbjct: 382 TEKQHLEWVGLVESKIRILVGNLEKNEFITL-AHVNPQSFPGPKEGNDKEEFSTMWVIGI 440
Query: 178 SRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
K++ S+ FD Q R ++ + I +V R+ L P+
Sbjct: 441 VFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQDMKITAMHVKRKQLHQL-LPE- 498
Query: 235 YKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQL 267
HR R + + D + S S+ +
Sbjct: 499 VAIHRSKRKHSSDGVRAMNDSNLDLSLDSDNSM 531
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 55 VIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 114
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ + G+ I + +I GK WS LFE + FF Y+ YL V
Sbjct: 115 HNITSSTQKVILAELSRGSSIMQ-----DIHAGKKSWSDLFEKHCFFYKYKFYLCVVAAT 169
Query: 121 AD-ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D A++ W G++ES+ RQL LK+E G+ HPY
Sbjct: 170 IDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPY 206
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 7/168 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FFR+ QW WP P+++ PIE G L +W+P+ P D++HRMPIITPAY M ++
Sbjct: 21 VIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCAT 80
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++L T ++ + I + +I + WSALF+ + FF Y++YL + A
Sbjct: 81 HNITLSTQTIILREMVRAGEIAD-----QIMVKALPWSALFQKHDFFHRYKHYLTITAAA 135
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 168
A+ L W G VES+ R L ++E + + HP+ NK D C
Sbjct: 136 KTAEAQLKWAGLVESKLRHLVTRLEL-VDAIALAHPF-NKGFDKVYNC 181
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 88/146 (60%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
++ L W G VES+ R L +E++
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERN 407
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 88/146 (60%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 381
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
++ L W G VES+ R L +E++
Sbjct: 382 TEENHLEWVGLVESKIRVLVGNLERN 407
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 7/164 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y+QW WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T ++ +F+ G I +I +GK EW LF + FF Y+ YL V
Sbjct: 313 HNITSSTQAIIVSEFKRGAEIMN-----DISIGKKEWGDLFARHEFFFRYKFYLCVVAST 367
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
A++ L W G VES+ R L K+E T G+ HPY + D
Sbjct: 368 KGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 117/237 (49%), Gaps = 18/237 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ FF+ ++ W+WP PV++ + G VWDP N +D H MPIITP Y M
Sbjct: 239 LLQIFFKTFSTWKWPMPVLLSTQKQRPPEGVNNLPVWDPSSNFRDAKHLMPIITPCYPSM 298
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVD 117
NSSY V L+ + ++F +++C ++ G +W LFE FF+ + NYLQVD
Sbjct: 299 NSSYNVGEPQLRRLRDEFARASKLCS-----DVAFGTKKWGVLFEWNEFFQQHANYLQVD 353
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP---NKYIDPSKPCPNSAFF 174
VA + DD W G E+R R L +E G ++ +P+ ++ D ++FF
Sbjct: 354 TVATNEDDFRAWFGLCEARMRLLIAGLESPGFG-VRAYPFAKFFHRREDGGGGNYIASFF 412
Query: 175 WGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
L + + + D V +F I+++ R D+ V R+ LPSFVF
Sbjct: 413 IALR-----FANKVWKVDLAPLVTDFLTVINSWDGREPTMDLMIRLVSRKDLPSFVF 464
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 93/157 (59%), Gaps = 7/157 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +YT+W WP PV++ PIE G L VW+PR P DR HRMP+ITPAY M +++
Sbjct: 254 IVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCATH 313
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIVA 120
++ T +V+ ++ + G I + A G+ W+ LFE + FF Y+ YL V
Sbjct: 314 NITSSTQKVIMKELERGAEIMSLVAS-----GEKTWADLFERHSFFHDYKFYLCIVAATL 368
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
AD ++ W G +ES+ R L K+E T+G+ HPY
Sbjct: 369 ADDEEHHKWSGMIESKLRILVQKLEV-TDGIALAHPY 404
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 32/267 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ ++ L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 336 NVSESTKKVILTEFNRGMSITD-----EIMLGRVGWDRLFEAPSFFYRYRHFIVLLVNSQ 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLL-----QCHPYPNKYIDPSKPCPNSAFFWG 176
ADD L W G VES+ R L +E+ + +L +C + NS
Sbjct: 391 TADDHLEWCGLVESKVRLLIGNLERIPHIVLAHVNPKCFELKKGAATANNSQNNSGNEDD 450
Query: 177 L----SRKEVGTSKECQ--------------QFDFQGTVKNFRRGID----NYRVRREGR 214
L ++ V T+ C D +++NF ++ N ++ +EG
Sbjct: 451 LKQQSAQAAVTTAPYCSLWFIGLEFERSENLNIDLTESIQNFTEHVNMHGVNIKMLKEGM 510
Query: 215 DIYFSYVCRRHLPSFVFPDGYKWHRPS 241
I +V R+ L ++ D K R S
Sbjct: 511 SIVARHVKRKQLSVYLDADFLKRERKS 537
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 15/211 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++SRFF ++ W+WP PV++ P++ G L VW+P N DR H+MP+ITPAY M S++
Sbjct: 255 ILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKMPVITPAYPSMCSTH 314
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
+S ++ V+ +++ G I I +G+ W+ LFE FF Y YLQ+ +
Sbjct: 315 NISHSSMAVIKAEWERGENIVN-----RIAVGQTTWAELFEPTDFFYKYRYYLQITASSQ 369
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGL 177
D D+ L W G VES+ R L +E G+ H Y +++ + + C G
Sbjct: 370 DMDNQLKWSGTVESKLRTLGANLE-GAEGVTLAHIYVDEF-EKTYSCKTEEEVKLVASGA 427
Query: 178 SRKEVGTSKECQQFDFQGTVK----NFRRGI 204
S E+ E D +G VK NF G+
Sbjct: 428 STPEISARTEDDIKDVEGAVKLHTSNFYIGL 458
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 1 MLVSRFFRVYTQWRWPNPVMM---CPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
++V +FF V++QW WP PV + GFSVWD R N DR H MPIITP Y
Sbjct: 264 VVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVADRYHLMPIITPVYPEQ 323
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVD 117
NS++ SL T +MT+ F+ G + E I GK W LF FF Y+ ++ +
Sbjct: 324 NSTFNTSLSTRTIMTKAFKEGLAVTE-----NILKGKGTWHDLFSPPEFFGQYKTFIMLT 378
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIE-------------------------------Q 146
VA +DLLTW G VES+ R L + +E Q
Sbjct: 379 AVANTKEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKEDKPPAEPVKEQQ 438
Query: 147 DTNGLLQCHPYPNKYIDPSKPCPNSA-----FFWGLSRKEVGTSKECQQFDFQGTVKNFR 201
+ + PN+ + ++P P +F GL G +KE D V+N R
Sbjct: 439 EESPKASAETEPNETEEKAEPKPQEETEGVNWFIGL---HFGQTKEKLNLDLTENVRNLR 495
Query: 202 ----RGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKM 257
R +N ++ ++G D+ + RR L + + P+ P + K E+
Sbjct: 496 DVIFRQAENIKILKDGMDVEVRVLKRRDLATVLPPEEVALLPPPEKKRKSIRKASEE--- 552
Query: 258 CQSCSSERQLKRKKEHEIKE 277
S+E KR KE + E
Sbjct: 553 ----SAENPSKRIKEDDAPE 568
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 115/231 (49%), Gaps = 22/231 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V++QW WP PV++ E +LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 275 LVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPIITPAYPQQNSTF 334
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T +M ++F+ G I + EI LG+ EW LFE FF Y++++ +
Sbjct: 335 NVSVSTRTIMRQEFKQGLAITD-----EIMLGRTEWIKLFEPPNFFGKYKHFIVLMATTM 389
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN-KYIDPSK--PCP------NSA 172
+ L W G VES+ R L +E+ HPY +++P PC S
Sbjct: 390 TKEHHLEWYGLVESKIRILISNLER--------HPYIEIAHVNPESFPPCEPDGDKLQSM 441
Query: 173 FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCR 223
+F GL + +D + V +R + ++ ++ YV R
Sbjct: 442 WFIGLQFSKTEHVNVDLTYDIRSFVDTVKRQATAINILKQDMEVDIKYVRR 492
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 98/164 (59%), Gaps = 7/164 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ PIE G L VW+PR DR+HRMPIITPAY M ++
Sbjct: 253 VIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPIITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI-V 119
+ ++ T +V+ + G I +I+LGK WS LF+ + FF Y+ YL + +
Sbjct: 313 HNITSSTQKVILSELVKGVDIVG-----DIKLGKRTWSDLFQRHDFFFRYKFYLCIVVGT 367
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
A+ ++ W G+VES+ R L K+E T+G+ HPY + D
Sbjct: 368 KANEEEHSKWSGFVESKLRLLVQKLEA-TSGIEIAHPYVKDFND 410
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 97/164 (59%), Gaps = 11/164 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++SRFF V +WRWP PV++ IE G L VW+PR +D+ HRMPIITPAY M ++
Sbjct: 252 VILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPIITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ + + G +I EI LG+ WSALFE + FF Y+ YL IVA
Sbjct: 312 HNITASTQKVILRELERGGQILN-----EIMLGQKPWSALFEKHHFFSDYKYYLS--IVA 364
Query: 121 AD---ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
A A+ L W G+VES+ R L K+E + + HPY +
Sbjct: 365 ASKGTAEQQLKWSGFVESKLRHLVQKLEL-LDSIELAHPYVKTF 407
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMM-CPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
LV RFF V++QW WP PV++ P E L VWDPR NP DR H MPIITPAY NS+
Sbjct: 256 LVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHLMPIITPAYPQQNST 315
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y V+ +L VM +F G R+ EI K+ W L E FF Y++++ + A
Sbjct: 316 YNVTRSSLTVMKGEFIDGYRVTA-----EIHENKSSWLKLLETPNFFNEYKHFIVLMASA 370
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLL-----QCHPYPNKYIDPSKPCPNSAFFW 175
++ W G VES+ R L +E++ L+ +P K D + N F
Sbjct: 371 ESQENFNLWTGLVESKIRILVGYLERNDYILIAHINQTGYPQEVKEKDVTTAYVNRWFLG 430
Query: 176 GLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
K++ ++ D Q R N +V +EG + +Y R LP ++
Sbjct: 431 LRFVKDLISTNINLTHDIQAFTDTLHRQAHNSKVFKEGMKVEATYSRRSQLPKYL 485
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++++FF + QW+WP+PV++ IE G L VW+P+ P DR+HRMPIITPAY M S++
Sbjct: 255 VIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHRMPIITPAYPSMCSTH 314
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V T +VM ++F+ G I + I G WS LF + FF Y++YLQ+
Sbjct: 315 NVGPSTQEVMRQEFKRGMDILD-----GIHKGTTTWSQLFNKHEFFSKYKHYLQIIASGQ 369
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
A+ W G VES+ RQL K+E +G+ HP+
Sbjct: 370 TAESQKKWSGAVESKVRQLVSKLEL-VDGIELAHPF 404
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 111/195 (56%), Gaps = 7/195 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF++ +W WP PV++ PIE G L VW+P+ P+D++HRMPIITPAY M S++
Sbjct: 273 VVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKAHRMPIITPAYPSMCSTH 332
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V++ T V T++F+ + +I LG+ +W+ LF+ FF Y+ YLQV +
Sbjct: 333 NVTVSTQTVTTQEFERAAVTTD-----KIMLGREKWTVLFQKNDFFHRYKYYLQVIASSN 387
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
D + L W G+VESR RQL +K+E N L HPY + D C N ++ +
Sbjct: 388 DDEKQLMWAGFVESRLRQLVMKLELAEN-LDIAHPYIKGF-DKKTMCFNENDQHDVAHGQ 445
Query: 182 VGTSKECQQFDFQGT 196
+S + F Q T
Sbjct: 446 APSSSDALAFIEQAT 460
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 22/238 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V++QW WP PV++ E LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 339 LVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQNSTF 398
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ TL +M ++F+ G I + EI L +++W LFE FF Y++++ +
Sbjct: 399 NVSVSTLTIMRQEFKQGLAITD-----EIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQ 453
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY-PNKYIDPSKPCPN--------SA 172
+ L W G VES+ R L +E+ HPY +++P P+ S
Sbjct: 454 SKEHHLEWYGLVESKIRILISNLER--------HPYIAIAHVNPESFPPSEPEGDKLQSM 505
Query: 173 FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+F GL + +D + V +R + ++ ++ YV RR L ++
Sbjct: 506 WFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 563
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 15/257 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRV++ W+W PV +C I+ G + F VWDPR NP+DR H MPIITPA+
Sbjct: 262 LIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ V+ T +V+TE+ I + +EL W + E F Y+++L +
Sbjct: 322 MNSTHNVTATTKKVITEELMRALEIFKTPNLSNLEL----WEKVLEEQDVFSNYKHFLVI 377
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
++ + W+GW+ SR R L ++E N ++ P K+ D + +SAFF
Sbjct: 378 EVYGSTEHAHGKWEGWIGSRMRFLISRLENLGNTHIRPIPGFFKFEDDNWDYASSAFF-- 435
Query: 177 LSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRD-IYFS--YVCRRHLPSFVFPD 233
+ G ++ + D + V++F+ I+N+ + RD I F+ ++ LP +V +
Sbjct: 436 AFKVISGVAENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYVLSN 495
Query: 234 GYKWHRPSRHFNEQSGK 250
K R +E+S +
Sbjct: 496 KSK-KRSINEISEESNR 511
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 96/162 (59%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 252 VIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPVITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++ G + +++ FE G+ WS LFE + FF Y YL V
Sbjct: 312 HNITSSTQKVIIQELLRGASV--MKSIFE---GEKTWSDLFERHNFFHRYRFYLCVVAAT 366
Query: 121 AD-ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
D A++ W G+VES+ RQL LK+E T G+ HPY +
Sbjct: 367 VDSAEEHHKWHGFVESKLRQLVLKLES-TEGIEIAHPYVKDF 407
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 22/238 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V++QW WP PV++ E LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 288 LVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQNSTF 347
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ TL +M ++F+ G I + EI L +++W LFE FF Y++++ +
Sbjct: 348 NVSVSTLTIMRQEFKQGLAITD-----EIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQ 402
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY-PNKYIDPSKPCPN--------SA 172
+ L W G VES+ R L +E+ HPY +++P P+ S
Sbjct: 403 SKEHHLEWYGLVESKIRILISNLER--------HPYIAIAHVNPESFPPSEPEGDKLQSM 454
Query: 173 FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 230
+F GL + +D + V +R + ++ ++ YV RR L ++
Sbjct: 455 WFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 512
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 104/200 (52%), Gaps = 25/200 (12%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF++Y+QW WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T V+ +F G V +I G A W LFE + FF Y+ YL V
Sbjct: 313 HNITKSTKDVIMSEFNRG-----VNVMAQIHAGTASWGLLFERHRFFFQYKFYLCIVAAT 367
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
+ + + L W G +ES+ R L K+E T G+ HPY KP NS
Sbjct: 368 KSSSAEHLKWSGMIESKVRLLVQKLEL-TEGITLAHPY-------VKPFENSY------- 412
Query: 180 KEVGTSKECQQ--FDFQGTV 197
VGTS E Q D GT+
Sbjct: 413 --VGTSAEHVQQIIDGYGTL 430
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F+ G +I +I K W+ LF+ + FF Y+ YL +
Sbjct: 314 HNITESTKKVILKEFERGMKITN-----DIFSNKLTWNDLFKKHTFFYDYKFYLTITTAT 368
Query: 121 ADAD-DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D D L W G VES+ R L LK+E G+ HPY
Sbjct: 369 KGTDEDHLKWSGLVESKVRLLILKLEA-LPGITLTHPY 405
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 15/227 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ + G RI +I K W+ LF+ + FF Y+ YL V
Sbjct: 314 HNITESTKKVILGELGRGIRITN-----DIFTNKKTWADLFQRHTFFHEYKFYLTVMAAT 368
Query: 121 -ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
D++ L W G VES+ R L LK+E T G+ HPY +KP +A+++
Sbjct: 369 NGDSEQHLKWSGMVESKVRLLVLKLEALT-GIKIAHPY-------TKPF-ETAYYYHNEE 419
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
+ + + +K F++ D + + +D+ Y+ ++
Sbjct: 420 ERKKIVDNYGTYKTEDVLKEFKKVTDENKDDPDVKDLPKVYITTMYI 466
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 121/246 (49%), Gaps = 33/246 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMM--C-----PIEMGELGFSVWDPRKNPKDRSHRMPIITPAY 54
L+ +FF V+T+W WP+PV++ C P +M VWDPR DR H MPIITPA+
Sbjct: 75 LIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSFQELVWDPRTRSCDRYHLMPIITPAF 134
Query: 55 HCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL 114
NS++ V+ T QV+ + + G I EI GKAEWS LF+ FF Y++++
Sbjct: 135 PEQNSTFNVTKSTRQVIMNELEEGLAIT-----IEILSGKAEWSKLFDEVNFFSRYKHFI 189
Query: 115 QVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---- 170
+ VAA+ +D L W G VES+ R L +E++ L CH P ++ P P P
Sbjct: 190 VLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSL-CHINP-QHFTPISPLPIEISI 247
Query: 171 -----SAFFWGLS-----RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSY 220
+F G+ +K + + E QQF+ R D V G + SY
Sbjct: 248 ENPCCQMWFIGMELNKQLKKNIDLTDEIQQFN-----DAVMRAADFQNVYCPGMAVLPSY 302
Query: 221 VCRRHL 226
V R L
Sbjct: 303 VRRADL 308
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 128/244 (52%), Gaps = 15/244 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W+W PV +C I+ G + F VWDPR NP+DR H MPIITPA+
Sbjct: 262 LIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ V+ T +V+TE+ I + +EL W + E F Y+++L +
Sbjct: 322 MNSTHNVTATTKRVITEELMRALEIFKTSNLTNVEL----WEKVLEEEDVFSNYKHFLVI 377
Query: 117 DIVAADADDLLT-WKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFW 175
++ ++ W+GW+ SR R L ++E N ++ P K+ D + +SAFF
Sbjct: 378 EVYGSNEHVAHNKWEGWIGSRMRFLISRLENLGNTYIRPIPGFFKFEDDNWDYASSAFF- 436
Query: 176 GLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRD-IYFS--YVCRRHLPSFVFP 232
+ G + + D + +V++F+ I+N+ + RD I F+ ++ LP +V
Sbjct: 437 -AFKVISGVVETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYVLS 495
Query: 233 DGYK 236
+ K
Sbjct: 496 NKSK 499
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FF + TQW WP PV++ PIE G L VW+PR P+DR HRMP+ITPAY M ++
Sbjct: 254 VIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ-VDIV 119
+ ++ T +V+ + Q G+ I +I K +W LF + FF Y+ YL +
Sbjct: 314 HNITASTQKVILNELQRGSLIMN-----DIISHKKQWEDLFVKHDFFYKYKFYLNIIAFT 368
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D + L W G VES+ R L K+E + G+ HPY
Sbjct: 369 RGDDEQHLKWSGLVESKLRLLVQKLE-NFQGINLAHPY 405
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ E+F G ++ +I K W+ LF+ + FF Y+ YL + +
Sbjct: 314 HNITESTKKVILEEFARGIQVTN-----DIFSNKGTWADLFQKHDFFYKYKFYLTITVST 368
Query: 121 ADAD-DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+D + L W G VES+ R L LK+E G+ HP+
Sbjct: 369 KGSDEEHLKWSGLVESKTRLLVLKLEA-LAGIKLAHPF 405
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLV FF+++ W+W PVM+ PI G VWD R N +R M IITPAY NS+
Sbjct: 242 MLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ V+ TL V+ +F+ G +C E+ + K W +L+E PFF +++YLQV I A
Sbjct: 302 FNVTHSTLHVLKNEFKRGREVCA-----EVLMSKKRWESLWEPLPFFTMHKHYLQVTIAA 356
Query: 121 ADADDLLTWKGWVESRFRQLTLKIE 145
DD W+GWV SR R L +E
Sbjct: 357 VSEDDFKKWEGWVHSRLRMLVQGVE 381
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 115/230 (50%), Gaps = 11/230 (4%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V+R + ++ WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 230 VNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYN 289
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 122
VS T +M E+F+ G + + EI GK++W L E FF+ Y++Y+ + ++
Sbjct: 290 VSTSTRAIMVEEFKHGLVVAD-----EIFQGKSDWPKLLEPPNFFQKYKHYIVLTASSST 344
Query: 123 ADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
+ L W G VES+ R L +E++ T + +P P + S +F G+
Sbjct: 345 EEHHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNRTQPKESDYVSLWFLGIIF 404
Query: 180 KEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 405 KKAENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 454
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ E+F G +I +I K WS LF + FF Y+ YL +
Sbjct: 314 HNITDSTKKVILEEFSRGIQITN-----DIFSSKKSWSDLFNKHEFFYKYKFYLTITAST 368
Query: 121 ADAD-DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+D + L W G VES+ R L LK+E +G+ HP+
Sbjct: 369 RASDEEHLKWSGLVESKVRLLVLKLEA-LSGIKIAHPF 405
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 252 VIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T +V+ ++ G+ I + I G+ WS LF + FF Y YL V
Sbjct: 312 HNITSSTQKVILQELTRGSNIMK-----SILEGEKSWSDLFARHDFFHRYRFYLCVVAAT 366
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ A++ W G+VES+ RQL +K+E T G+ HPY +
Sbjct: 367 SESAEEHHKWHGFVESKLRQLVIKLES-TEGVELAHPYVKDF 407
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 128/274 (46%), Gaps = 46/274 (16%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 278 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 337
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 338 NVSESTKKVILTEFNRGMNITD-----EIMLGRISWERLFEAPSFFYRYRHFIVLLVNSQ 392
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP----------------------- 158
ADD L W G VES+ R L +E++ + L H P
Sbjct: 393 TADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFRKGQSANNSQNNSGNEDD 451
Query: 159 ------NKYIDPSKP-CPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGID----NY 207
N+ S P C S +F GL + E D +++NF + N
Sbjct: 452 LKQSQGNQSAVTSAPFC--SMWFIGLEFER----SENLNVDLTESIQNFTEHVTMHGVNI 505
Query: 208 RVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPS 241
++ +EG I +V R+ L ++ D K R S
Sbjct: 506 KMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 539
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 27/242 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ + F +++ W+WP PV++ I ++ +L VWDPR+N DR H MPI+TPA+
Sbjct: 266 LIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTPAFPQ 325
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ VS +++V+ E+ + C+ I+ G W L E FF Y++++ +
Sbjct: 326 QNSTHNVSRSSMKVIQEEMKDALITCD-----NIQNGSCNWMDLLEEINFFSRYKHFISL 380
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
+ A D L + G+ ESR RQL L +E++ G+ H P K+ P S +F G
Sbjct: 381 SMTAETEKDELAFGGFFESRIRQLVLILEKN-QGIKLAHINPKKFKAAKDP-KKSVWFIG 438
Query: 177 LSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIY--------FSYVCRRHLPS 228
L E + D ++ F+R ID Y+ + +DI FSYV R L
Sbjct: 439 LQFDE-----NVKNLDLTKDIQQFKRNID-YQA-KSVKDIEANCAVETDFSYVKRSDLAQ 491
Query: 229 FV 230
+
Sbjct: 492 TI 493
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 98/160 (61%), Gaps = 11/160 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ +W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F+ G V+ +I K W+ LF+ + FF Y+ YL V VA
Sbjct: 314 HNITDSTKKVILQEFERG-----VQVTNDIFTNKKTWADLFKKHEFFHKYKFYLTV--VA 366
Query: 121 A---DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ + L W G+VES+ R L LK+E G+ HPY
Sbjct: 367 STRGSTEQHLKWSGFVESKLRLLVLKLET-LAGIKLAHPY 405
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 9/165 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ PIE G L VW+PR P DR H+MP+ITPAY M ++
Sbjct: 253 VIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ + + G+ + +I L W+ LF+ + FF Y+ YL + I A
Sbjct: 313 HNINSSTQKVIMNELERGSELMA-----QISLNNKTWADLFQRHDFFHRYKFYLCI-IAA 366
Query: 121 ADA--DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
+ ++ W G VES+ R L K+E T+G+ HPY + D
Sbjct: 367 TEGTNEEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSD 410
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 274 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 333
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 334 NVSESTKKVILTEFNRGMSITD-----EIMLGRVNWDRLFEAPSFFYRYRHFIVLLVNSQ 388
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
ADD L W G VES+ R L +E++
Sbjct: 389 TADDHLEWCGLVESKVRLLIGNLERN 414
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 252 VIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T +V+ ++ G+ I + I G+ WS LF + FF Y YL V
Sbjct: 312 HNITSSTQKVILQELTRGSSIMK-----SILEGEKSWSDLFARHDFFHRYRFYLCVVAAT 366
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ A++ W G+VES+ RQL +K+E T G+ HPY +
Sbjct: 367 SESAEEHHKWHGFVESKLRQLVIKLES-TEGVELAHPYVKDF 407
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 92/157 (58%), Gaps = 6/157 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 287 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTF 346
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 347 NVSESTKKVILTEFNRGMSITD-----EIMLGRVSWDRLFEAPSFFYRYRHFIVLLVNSQ 401
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 158
ADD L W G VES+ R L +E++ + +L H P
Sbjct: 402 TADDHLEWCGLVESKVRLLIGNLERNPHIVL-AHVNP 437
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 277 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 336
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 337 NVSESTKKVILTEFNRGMNITD-----EIMLGRIPWDRLFEAPSFFYRYRHFIVLLVNSQ 391
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
ADD L W G VES+ R L +E++
Sbjct: 392 TADDHLEWCGLVESKVRLLIGNLERN 417
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 336 NVSESTKKVILTEFNRGMNITD-----EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQ 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
ADD L W G VES+ R L +E++
Sbjct: 391 TADDHLEWCGLVESKVRLLIGNLERN 416
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 336 NVSESTKKVILTEFNRGMNITD-----EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQ 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
ADD L W G VES+ R L +E++
Sbjct: 391 TADDHLEWCGLVESKVRLLIGNLERN 416
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 16/237 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMM--CPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
LV +FF +Y++W WP PV++ P E +L F +WDPR NP DR H MPIITPAY NS
Sbjct: 103 LVQKFFLIYSKWAWPQPVLLKQMPTE-NKLNFPIWDPRMNPADRFHLMPIITPAYPQQNS 161
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ VS+ + VM + F+ G ++ E EI + W ALF FF+ Y++Y+ +
Sbjct: 162 TFNVSMSSRTVMQDAFKRGFQVME-----EIYSKTSTWKALFAPANFFQKYKHYIVLSAY 216
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGL 177
+ ++ L W+G VES+ R L + +E++ L H P Y I S+ S +F GL
Sbjct: 217 SNSSEHHLEWEGLVESKIRILIVNLERNQFVKL-AHVNPKSYDPILKSESGTVSRWFIGL 275
Query: 178 SRKEVGTSKECQQFDFQGTVKNFRRGID----NYRVRREGRDIYFSYVCRRHLPSFV 230
++ +K + D ++ F + + REG +V ++ L +++
Sbjct: 276 EFQKPEGTKNV-KVDITAEIQYFTSTVHKQACQIAIFREGMRTEARHVKKKQLSNYL 331
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 6/158 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FFR+ QW WP PV++ PIE G L VW+PR P D++H MPIITPAY M S+
Sbjct: 943 VIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPSDKNHLMPIITPAYPSMCST 1002
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ T + + I + I GK W LFE + FF + Y+ YL V+
Sbjct: 1003 HNITPSTKAAILGEMAKAADIVD-----RIITGKGNWKQLFERHTFFTKDYKYYLAVNAS 1057
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
A + + + W G VES+ R L +K+E + + PY
Sbjct: 1058 AKEQEASVKWSGLVESKIRHLVMKLEMCNDVIASARPY 1095
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 336 NVSESTKKVILTEFNRGMNITD-----EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQ 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
ADD L W G VES+ R L +E++
Sbjct: 391 TADDHLEWCGLVESKVRLLIGNLERN 416
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 336 NVSESTKKVILTEFNRGMNITD-----EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQ 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
ADD L W G VES+ R L +E++
Sbjct: 391 TADDHLEWCGLVESKVRLLIGNLERN 416
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 138/288 (47%), Gaps = 31/288 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF++++ W WP P+ + +E WDP+ N DR H MPIITPAY N+S
Sbjct: 253 LVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPIITPAYPQQNTSV 312
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS TL ++ E+ G+ IC+ EIE KA+WS LFE FF+ Y++Y ++
Sbjct: 313 NVSRSTLAILNEEIHRGHAICQ-----EIEQKKAKWSELFEQTDFFQKYQHYAVLEASYT 367
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD-TNGLLQCHP--YPNKYIDPSKPCPNSAFFWGLS 178
+ L W G VES+ R L +E++ L HP +P K ++ + GL
Sbjct: 368 TEEKCLEWVGLVESKIRLLVSTLERNELVSLAHVHPHAFPGHRKANKKDGQSTMWLIGL- 426
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
V K+ ++F+ + R D Y EG + S C R ++ +
Sbjct: 427 ---VLNVKDSERFN------SLARSSDIY---DEG--MSLSVACLRR-EDLIYEPQQRAP 471
Query: 239 RPSRHFNEQSGKPC--EDVKMCQSCSSERQLKRKKEHEIKEVRPDKSV 284
+PS ++ PC V + + +R+L + E K+++ DKS+
Sbjct: 472 QPS-----ETLPPCHVSPVSADKQGTKKRELLHRSETPSKKIKDDKSL 514
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 288 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTF 347
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 348 NVSESTKKVILTEFNRGMNITD-----EIMLGRVPWERLFEAPSFFYRYRHFIVLLVNSQ 402
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTN-GLLQCHP 156
ADD L W G VES+ R L +E++ + L +P
Sbjct: 403 TADDHLEWCGLVESKVRLLIGNLERNAHIALAHVNP 438
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 336 NVSESTKKVILTEFNRGMNITD-----EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQ 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
ADD L W G VES+ R L +E++
Sbjct: 391 TADDHLEWCGLVESKVRLLISNLERN 416
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 15/216 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF+++++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T ++ ++F G V+ +I K W LF+ + FF Y+ YL +
Sbjct: 314 HNITESTKTIILKEFARG-----VQVTNDIFSNKGNWGDLFKKHTFFYEYKFYLTITAST 368
Query: 121 ADAD-DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
D + L W G VES+ R L LK+E G+ HPY +KP S + +
Sbjct: 369 RGTDEEHLKWSGLVESKLRLLILKLEA-LPGINLAHPY-------TKPF-ESTYCYTTDE 419
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRD 215
+ + +GT+ NF + D+ + + +D
Sbjct: 420 ESKTILNDYGSHATEGTLNNFLKVTDDNKNNDDVKD 455
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 336 NVSESTKKVILTEFNRGMNITD-----EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQ 390
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
ADD L W G VES+ R L +E++
Sbjct: 391 TADDHLEWCGLVESKVRLLIGNLERN 416
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 102/166 (61%), Gaps = 14/166 (8%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIE----MGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ RFF +Y+ W+W + PV + I+ +L W P +DR+ M IITP + C
Sbjct: 1362 LIERFFFLYSHWKWHDLPVYVEHIQEDVANTKLNADQWRPE--FRDRNSMM-IITPCFPC 1418
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MN+++ VS TL+++ EQ Q GNRI +I+ + +S LF+ + FF+ Y+++LQ+
Sbjct: 1419 MNTAHNVSPTTLRIIQEQLQYGNRIIN-----KIKKNEKTFSDLFKPFNFFKRYKHFLQI 1473
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDT-NGLLQCHPYPNKY 161
+IVA + +D + WKG VESR R+LT EQ N L+Q HPYPN +
Sbjct: 1474 NIVATNKNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPNPF 1519
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 76 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHPMPIITPAYPQQNSTF 135
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ +F G I + EI LG+ W LFE FF Y +++ + + +
Sbjct: 136 NVSESTKKVILTEFNRGMNITD-----EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQ 190
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
ADD L W G VES+ R L +E++
Sbjct: 191 TADDHLEWCGLVESKVRLLIGNLERN 216
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DR HRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F+ G I I KA W LF+ + FF Y+ YL V
Sbjct: 314 HNITESTKKVILKEFERGVEITN-----NIFSNKATWEDLFKRHTFFHDYKFYLTVTAST 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D+ L W G VES+ R L LK+E G+ HPY
Sbjct: 369 KGNDEQHLKWSGLVESKVRLLILKLEA-LPGIKSAHPY 405
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 96/159 (60%), Gaps = 9/159 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRIC-EVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
+ ++ T V+ ++ G ++ ++ AY K W+ LF + FF Y+ YL +
Sbjct: 314 HNITESTKAVILKELNRGIQVTNDIFAY------KKTWADLFTKHDFFFQYKYYLTITAA 367
Query: 120 A-ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D ++ L W G VES+ R LTLK+E G+ HP+
Sbjct: 368 TRGDDEEHLKWSGLVESKLRLLTLKLET-IPGIKLAHPF 405
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 94/162 (58%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF++Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 258 VILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T +++ +F G I EI G+ WS L E + FF Y+ YL V
Sbjct: 318 HNITNSTQKIIMNEFNRGVEIIG-----EIFTGQKVWSHLLERHSFFHQYKFYLCVVAAT 372
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
++A++ L + G VES+ R L K+EQ +G+ HPY +
Sbjct: 373 KSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSF 413
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + T+W WP PV++ PIE G L VW+PR +DRSH+MP+ITPAY M ++
Sbjct: 254 VILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI-V 119
+ +S T +V+ + + G +I EI K WS LF+ + FF Y+ YL V
Sbjct: 314 HNISESTKKVILAELERGAQISS-----EIFSNKKTWSDLFQKHDFFYKYKFYLTVMAST 368
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ ++ L W G VES+ R L K+E G+ HP+
Sbjct: 369 SGSSEQHLKWSGLVESKLRLLVQKLET-LGGINLAHPF 405
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 94/162 (58%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF++Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T +++ +F G I EI G+ WS L E + FF Y+ YL V
Sbjct: 313 HNITNSTQKIIMNEFNRGVEIIG-----EIFTGQKVWSHLLERHSFFHQYKFYLCVVAAT 367
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
++A++ L + G VES+ R L K+EQ +G+ HPY +
Sbjct: 368 KSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSF 408
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++S+FF++ W WP PV++ IE G L VW+P+ P DR H MPIITPAY M ++
Sbjct: 258 VVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGHLMPIITPAYPSMCAT 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ T ++ + + I + I +G W LFE + FF Y YL V
Sbjct: 318 HNITKSTKSIIIREMKHAAEIMD-----GIMVGNLSWDKLFERHSFFTNGYRYYLSVVAA 372
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 168
A D D LL W G VES+ R L +K+E + HP+ NK D C
Sbjct: 373 AKDKDTLLGWSGLVESKLRHLVMKLEI-LETIKLAHPF-NKGFDNVHFC 419
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H PIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLXPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T V E+F+ G I + EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRXVXVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
L W G VES+ R L +E++ T + +P +P K + + GL
Sbjct: 383 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTXWVIGLV 442
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
K+ S+ +D Q R N + I +V R+ L
Sbjct: 443 FKKTENSENLSVDLTYDIQSFTDTVYRQAINSKXFEVDXKIAAXHVKRKQL 493
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 7/169 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++SRFF + QW WP P+++ IE G L VW+P+ P DR+H MPIITPAY M +++
Sbjct: 257 ILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPSDRTHLMPIITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T+++M + + G++I E +I W+ LFE + FF Y YLQ+ I +
Sbjct: 317 NVTHSTMKIMQNELRRGSQIVE-----KIIQAGEPWANLFEKHDFFHMYRYYLQIIITSG 371
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+ + W G VES+ R L K+E + HP+ K +D C N
Sbjct: 372 NQEMYHKWAGTVESKIRLLVGKLELQ-EAVEIAHPF-TKGLDQVVCCLN 418
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF + + W+WP PV++ IE G L VW+P+ P DR+H+MPIITPAY M S++
Sbjct: 256 IVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPSDRAHKMPIITPAYPSMCSTH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V T +++ E+ + G + I G+A+W+ LF + FF Y+ YLQ+
Sbjct: 316 NVMNCTFEIIQEELKRGQELI-----VRITNGEAKWADLFTKHTFFSQYQYYLQIIASCD 370
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D + W VES+ RQL K+E+ + L + HP+
Sbjct: 371 DEEIQKKWSKTVESKGRQLVGKLEE-SGTLARVHPF 405
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 7/182 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VSL T V+ + + G I E +I LG+ WS LF + FF + Y+ YL +
Sbjct: 319 HNVSLSTKAVILRELKRGGDIVE-----KIFLGQLRWSDLFAKHTFFSKDYKYYLNITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
+ + W G VE++ R L + +++ + + HP+P ++ + S GL +
Sbjct: 374 STSKEAQSVWSGLVEAKLRHLVIALDKKAS-IEVAHPFPKAHVAALESANGSINMPGLGQ 432
Query: 180 KE 181
E
Sbjct: 433 TE 434
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 15/177 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV R F ++ W WP+PV++ + ++G L VWDPR+ DR H MPIITPA+
Sbjct: 257 LVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDPRRKSTDRFHLMPIITPAFPQ 316
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ V+ T+QV+ + G IC +I GK W ALF+ FF Y++Y+ +
Sbjct: 317 QNSTHNVTRSTMQVIRTEICEGLEICR-----DISEGKCGWDALFKEVNFFSRYKHYIAL 371
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF 173
+ A + ++ L + G++ESR R L +E++ + ++ H PNK+ KP PN+ F
Sbjct: 372 LMAAPNEEEELNYGGFLESRIRLLVQSLERNQD-IVIAHNDPNKH----KPSPNAKF 423
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 100/170 (58%), Gaps = 8/170 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++
Sbjct: 314 HNITESTKKVILQEFVRGVQITN-----DIFSNKKSWANLFEKNDFFFRYKFYLEITAYT 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 169
+D+ L W G VES+ R L +K+E T G+ HP+ K + S CP
Sbjct: 369 RGSDEQHLKWSGLVESKVRLLVMKLEVLT-GIKIAHPF-TKPFESSYCCP 416
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V+RFF + T+W WP PV++ PIE G L VW+P+ DR H+MP+ITPAY M S+
Sbjct: 254 VIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKMPVITPAYPSMCST 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ + T +V+ + Q G V +I K W LF+ + FF Y+ YL V
Sbjct: 314 HNICESTKKVILNELQRG-----VEVTTDIFTNKKTWGDLFQKHDFFYKYKFYLTVMAST 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+D+ L W G VES+ R L LK+E +G+ HPY
Sbjct: 369 KGSDEQHLKWSGLVESKLRLLVLKLEV-LSGINLAHPY 405
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 100/170 (58%), Gaps = 8/170 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F+ G +I +I K W+ LFE FF Y+ YL++
Sbjct: 314 HNITESTKKVILKEFERGVQITN-----DIFSNKKSWANLFEKNDFFFRYKFYLEITAYT 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 169
+D+ L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 369 RGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCP 416
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 122/235 (51%), Gaps = 22/235 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
++ +FF+VY W W PV++ I+ G + F VWDP+ NP+DR H MPIITPA+
Sbjct: 262 IIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPKTNPQDRLHLMPIITPAFPA 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ V+ T +VM +F+ + + + ++ + W+ L E F ++++L +
Sbjct: 322 MNSTHNVTNTTKRVMINEFKRAHELLKTQS-------QMTWNDLLEPANIFNEFKHFLVI 374
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA-FFW 175
+VA+D W GW+ESR R L K+E + L+ P+ DP NS F
Sbjct: 375 IVVASDEKAHSKWHGWIESRIRFLIRKLEAIEHTELRPWPHSITMEDPD--WTNSKWIFI 432
Query: 176 GLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYR--VRREGR-DIYFSYVCRRHLP 227
GLS + E QFD + +K F+ I +++ E + D+ Y+ + LP
Sbjct: 433 GLSYNKT----EESQFDIRTPIKEFKNLIFSWQELTSYESKVDVRIEYMKKSQLP 483
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF + QW WP PV++ ++ ++G W+P+ P DR+HRMP+ITP Y M +++
Sbjct: 258 VVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRMPVITPVYPAMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T ++ E+ + G ++ I LG ++WS LFE + FF Y +LQ+ A
Sbjct: 318 NVSVSTFAIIEEELRRGTKLMN-----SIILGSSKWSELFEKHDFFHKYRYFLQIIASTA 372
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
A+ L W VE++ RQL K+E L HP+
Sbjct: 373 SAEAQLMWAPNVEAKIRQLVSKLEL-VESLTLAHPF 407
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 100/170 (58%), Gaps = 8/170 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F+ G +I +I K W+ LFE FF Y+ YL++
Sbjct: 314 HNITESTKKVILKEFERGVQITN-----DIFSNKKSWANLFEKNDFFYRYKFYLEITAYT 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 169
+D+ L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 369 RGSDEQHLKWGGLVESKVRLLIMKLEV-LAGIKIAHPF-TKPFESSYCCP 416
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++ + G I +I K WS LF + FF Y+ YL V
Sbjct: 314 HNITESTKRVILQELENGISITN-----DIFSNKKTWSDLFTKHNFFYKYKFYLTVMAST 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
D+ L W G VES+ R L LK+E G+ HP+
Sbjct: 369 RGTDEENLKWSGMVESKVRLLVLKLEA-LPGIKLAHPF 405
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FFR+ QW WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 276 VIIGKFFRIMNQWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 335
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ +SL T V+ + + G I + +I +G+ WS LF + FF + Y+ YL +
Sbjct: 336 HNISLSTKAVILRELKRGGDIVD-----KIFMGQLRWSDLFAKHSFFSKDYKYYLSITAS 390
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L L +++ ++ + HP+P +
Sbjct: 391 STTKEAQSVWSGLVESKLRHLVLALDRKSS-IEVAHPFPKGF 431
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 96/162 (59%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++S+FF++ ++W+WP PV++ PIE G L VW+P+ +DRSH+MP+ITPAY M ++
Sbjct: 254 VIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ +S T +V+ + Q G + + F EL W LF+ + FF Y+ YL V +
Sbjct: 314 HNISESTKKVILSELQRGVEVTQ--KIFSNELS---WEDLFKKHDFFFKYKFYLTVMVST 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+D+ L W G+VES+ R L K+E G+ HP+ Y
Sbjct: 369 KGSDEQHLKWSGFVESKLRLLVQKLEV-LPGINLAHPFIEPY 409
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 8/170 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++
Sbjct: 314 HNITESTKKVILQEFVRGVQITN-----DIFSNKKSWANLFEKNDFFFRYKFYLEITAYT 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 169
+D+ L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 369 RGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCP 416
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 95/168 (56%), Gaps = 17/168 (10%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++Y+ W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T ++ ++ Q G +I +I K W+ LF+ + FF Y+ YL +
Sbjct: 314 HNITESTKSIILQELQRGIQITN-----DIFTNKKTWNDLFKRHDFFYKYKFYLTITAST 368
Query: 121 AD--ADD---------LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ DD L W G VES+ R L +K+E G+ HPY
Sbjct: 369 REHTGDDGEKTGGDEQHLKWSGLVESKARLLVMKLEA-LEGIKVAHPY 415
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 8/170 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++
Sbjct: 314 HNITESTKKVILQEFVRGVQITN-----DIFSNKKSWANLFEKNDFFFRYKFYLEITAYT 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 169
+D+ L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 369 RGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCP 416
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 250 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 309
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++
Sbjct: 310 HNITESTKKVILQEFVRGVQITN-----DIFSNKKSWANLFEKNDFFFRYKFYLEITAYT 364
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+D+ L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 365 RGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 413
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++
Sbjct: 314 HNITESTKKVILQEFVRGVQITN-----DIFSNKKSWANLFEKNDFFFRYKFYLEITAYT 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+D+ L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 369 RGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 417
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++
Sbjct: 314 HNITESTKKVILQEFVRGVQITN-----DIFSNKKSWANLFEKNDFFFRYKFYLEITAYT 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+D+ L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 369 RGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 417
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++
Sbjct: 314 HNITESTKKVILQEFVRGVQITN-----DIFSNKKSWANLFEKNDFFFRYKFYLEITAYT 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+D+ L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 369 RGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 417
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF + W WP+P+ + E G LG + WDP NP D+ H MP+ITPAY CMNS++
Sbjct: 260 IVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPGDKRHLMPVITPAYPCMNSTH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
++ T+ V+ ++ G +I EI GK W LF + FF +AY++Y+ + A
Sbjct: 320 TITPSTMAVLKKESDRGEKIMN-----EIYEGKRPWKDLFAKHTFFSDAYQHYICIITAA 374
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
D W G V+SR ++L IEQ D + + P+ NK I C + A
Sbjct: 375 RTKDAQQAWSGLVQSRVKRLLAGIEQSDADSVKLVQPF-NKGIARRHECKSEADI----E 429
Query: 180 KEVGTSKECQ 189
K + ECQ
Sbjct: 430 KTLAGGLECQ 439
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VSL T V+ + + G I E +I LG+ WS LF + FF + Y+ YL +
Sbjct: 319 HNVSLSTKAVILRELKRGGDIVE-----KIFLGQLRWSDLFAKHTFFSKDYKYYLNITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VE++ R L + +++ + + HP+P +
Sbjct: 374 STSKEAQSVWSGLVEAKLRHLVIALDKKAS-IEVAHPFPKGF 414
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VSL T V+ + + G I E +I LG+ WS LF + FF + Y+ YL +
Sbjct: 319 HNVSLSTKAVILRELKRGGDIVE-----KIFLGQLRWSDLFAKHTFFSKDYKYYLNITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VE++ R L + +++ + + HP+P +
Sbjct: 374 STSKEAQSVWSGLVEAKLRHLVIALDKKAS-IDVAHPFPKGF 414
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 11/160 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y QW WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +++ ++F+ G I +I W+ L + FF Y+ YL IVA
Sbjct: 313 HNITSSTQKIIMKEFRRGIDIMN-----QINGNNKTWANLLARHTFFHNYKFYLC--IVA 365
Query: 121 ADA---DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
A ++ + W G VESR R L K+E T G+ HPY
Sbjct: 366 ATKGPYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 11/164 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ +FQ G + +I +GK WS L E + FF Y+ YL IVA
Sbjct: 313 HNITSSTQKVILSEFQRGIELMN-----DINVGKKSWSDLLERHDFFFRYKFYLC--IVA 365
Query: 121 ADAD---DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
A + L + G VES+ R L K+E G+ HPY +
Sbjct: 366 ATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPYVKSF 408
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 11/164 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ +FQ G + +I +GK WS L E + FF Y+ YL IVA
Sbjct: 313 HNITSSTQKVILSEFQRGIELMN-----DINVGKKSWSDLLERHDFFFRYKFYLC--IVA 365
Query: 121 ADAD---DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
A + L + G VES+ R L K+E G+ HPY +
Sbjct: 366 ATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPYVKSF 408
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 11/160 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y QW WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +++ ++F+ G I +I W+ L + FF Y+ YL IVA
Sbjct: 313 HNITSSTQKIIMKEFRRGIDIMN-----QISGNNKTWANLLARHTFFHNYKFYLC--IVA 365
Query: 121 ADA---DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
A ++ + W G VESR R L K+E T G+ HPY
Sbjct: 366 ATKGSYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 11/160 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++S+FF + QW WP PV++ PIE G L VW+PR P D+ H+MP+ITPAY M ++
Sbjct: 252 VIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++FQ G+ I EI G +WS LF + FF Y+ YL V +A
Sbjct: 312 HNITESTKKVILQEFQRGSGIVT-----EIFSGAKKWSDLFTKHDFFRRYKFYLTV--IA 364
Query: 121 A---DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
A +++ + G VES+ R L K+E + N L HP+
Sbjct: 365 ATKGSSEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 403
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 247 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 306
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VSL T V+ + + G I E +I LG+ WS LF + FF + Y+ YL +
Sbjct: 307 HNVSLSTKAVILRELKRGGDIVE-----KIFLGQLRWSDLFAKHTFFSKDYKYYLNITAS 361
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VE++ R L + +++ + + HP+P +
Sbjct: 362 STSKEAQSVWSGLVEAKLRHLVIALDKKAS-IDVAHPFPKGF 402
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 93/161 (57%), Gaps = 7/161 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF++ +W+WP PV++ IE G L VW+P+ N DR H MPIITPAY M +++
Sbjct: 261 IVMKFFKIIDKWQWPQPVLLKNIETGTLNLQVWNPQINHTDRRHIMPIITPAYPSMCTTH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
V+ T+ V+ ++ + G I + + +GKA+W LFE + FF +Y+ YL + +
Sbjct: 321 NVTRSTMAVIHKELKRGGEIAD-----RVMMGKAKWKDLFEKHTFFTSSYKYYLCIITAS 375
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
++ W G+VES+ R L K+ + T+ + P+ Y
Sbjct: 376 TSSEAQTKWAGFVESKVRLLVGKLTEQTS-IAIAQPFNKGY 415
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF +Y+QW WP PV++ IE G L VW+P+ DR HRMP+ITPAY M ++
Sbjct: 253 VIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T +V+ +FQ G I I G WS LFE + FF Y+ YL V
Sbjct: 313 HNITSSTQKVILSEFQRGIEIMN-----GINSGSKTWSDLFERHDFFFRYKFYLCIVAAT 367
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
+++++ L + G VES+ R L K+E G+ HPY + D
Sbjct: 368 KSNSEEHLKYGGMVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++
Sbjct: 314 HNITECTKKVILQEFVRGVQITN-----DIFSNKKSWANLFEKNDFFFRYKFYLEITAYT 368
Query: 121 ADADDL-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+D+ L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 369 RGSDEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 417
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 11/164 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++S+FF + QW WP PV++ PIE G L VW+PR P D+ H+MP+ITPAY M ++
Sbjct: 609 VIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPAYPSMCAT 668
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +V+ ++FQ G+ I EI G +WS LF + FF Y+ YL V +A
Sbjct: 669 HNITESTKKVILQEFQRGSGIVT-----EIFSGAKKWSDLFTKHDFFRRYKFYLTV--IA 721
Query: 121 A---DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
A +++ + G VES+ R L K+E + N L HP+ +
Sbjct: 722 ATKGSSEEQKKFAGMVESKLRLLVQKLENNENINL-AHPFVKTF 764
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 12/174 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE------MGELGFSVWDPRKNPKDRSHRMPIITPAYH 55
LV +FF +YT+W WP+PV++ E M L VWDPR DR H MPI+TPA+
Sbjct: 401 LVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQELVWDPRSRSGDRFHLMPIVTPAFP 460
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
NS++ V+ +L+++ + + G + +I GKAEWSALFE FF Y+++L
Sbjct: 461 QQNSTFNVTKSSLKIIMNEIEEG-----LVTINDIMKGKAEWSALFEEVNFFSRYKHFLA 515
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 169
+ ++A D L W G VES+ R L +E+ + CH + Y + P P
Sbjct: 516 LLCLSATEQDELVWCGLVESKIRFLIASLER-RESIRVCHVHTKYYQPRNDPLP 568
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
VSL T V+ + + G I + +I +G+ W+ LF + FF + Y+ YL + +
Sbjct: 320 NVSLSTKTVLLRELKRGGDIAD-----KIFVGQLSWNDLFTRHTFFSQDYKYYLNITSAS 374
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
D W G VES+ R L +++ ++ + HP+P +
Sbjct: 375 RSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
VSL T V+ + + G I + +I +G+ W+ LF + FF + Y+ YL + +
Sbjct: 320 NVSLSTKTVLLRELKRGGDIAD-----KIFVGQLSWNDLFTRHTFFSQDYKYYLNITSAS 374
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
D W G VES+ R L +++ ++ + HP+P +
Sbjct: 375 RSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 VVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
VSL T V+ + + G I + +I +G+ W+ LF + FF + Y+ YL + +
Sbjct: 320 NVSLSTKTVLLRELKRGGDIAD-----KIFVGQLSWNDLFTRHTFFSQDYKYYLNITSAS 374
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
D W G VES+ R L +++ ++ + HP+P +
Sbjct: 375 RSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VSL T V+ + + G I + +I LG+ W+ LF + FF + Y+ YL +
Sbjct: 319 HNVSLSTKAVLLRELKRGGDIVD-----KIFLGQLTWNDLFTRHTFFSQDYKYYLSITSS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ ++ + HP+P +
Sbjct: 374 SRGKEAQSVWSGLVESKLRHLVGALDRKSS-IEVAHPFPKGF 414
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MPIITPAY M ++
Sbjct: 259 VIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ ++ ++ + Q G I E ++ +GK WS LF + FF Y+ Y+ V
Sbjct: 319 FNITRSSMSIIKRELQRGLEISE-----QVMVGKQPWSDLFVKHTFFTTGYKYYISVVSA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G++ES+ R L K+EQ + L HPY Y
Sbjct: 374 SKAKEPHKLWAGYIESKVRMLVQKLEQHPHIAL-AHPYVKGY 414
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 153 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 212
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
VSL T V+ + + G I + +I +G+ W+ LF + FF + Y+ YL + +
Sbjct: 213 NVSLSTKTVLLRELKRGGDIAD-----KIFVGQLSWNDLFTRHTFFSQDYKYYLNITSAS 267
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
D W G VES+ R L +++ ++ + HP+P +
Sbjct: 268 RSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 307
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 7/161 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
VSL T V+ + + G I + I +G+ W+ LF + FF + Y+ YL + +
Sbjct: 320 NVSLSTKAVLLRELKRGGDIAD-----RIFVGQLTWNDLFTRHTFFSQDYKYYLSITSAS 374
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
D W G VES+ R L +++ ++ + HP+P +
Sbjct: 375 RSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 7/161 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
VSL T V+ + + G I + I +G+ W+ LF + FF + Y+ YL + +
Sbjct: 320 NVSLSTKAVLLRELKRGGDIAD-----RIFVGQLTWNDLFTRHTFFSQDYKYYLSITSAS 374
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
D W G VES+ R L +++ ++ + HP+P +
Sbjct: 375 RSKDAQSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 61/318 (19%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V +FF +Y QW WP PV++ I+ G + SVW+P+ + +D++HRMP+ITPAY M S
Sbjct: 258 IVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ ++ T+ ++ ++ +I + ++ + W LFE FF Y+ Y+QV
Sbjct: 318 THNITSSTMSIIRKEMLRAMQITDEI----LKTPGSSWIPLFEKVDFFSMYKTYVQVVAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A+ +D + W G VESR R L +E +T+ ++ HP + F+ L+
Sbjct: 374 ASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---------NRVFYCLTE 423
Query: 180 KEVGTSKECQ---------QFDFQGT------VKNFRRGIDNYRVRRE--GRDIYFSY-- 220
+E + + + + D +G K+F G++ + +E GR + Y
Sbjct: 424 EEQAAASQGELTAEMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVLNLFYPS 483
Query: 221 -----VC-------------------RRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVK 256
VC R LP +VFPDG + +Q+G ED
Sbjct: 484 KKFCAVCQNWDKYNEMEMSVILRPAKRSELPPYVFPDGMPKSKKKTKRQQQNG--SEDAG 541
Query: 257 MCQSCSSERQLKRKKEHE 274
M + KR K +
Sbjct: 542 MNDGSEGQGPSKRTKSEQ 559
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FF + W WP + + E LG VWDPR +D MP+ITPAY MNS Y
Sbjct: 259 VLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDSLALMPVITPAYPAMNSLY 318
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGK-AEWSALFEHYPFFEAYENYLQVDIVA 120
V TL+VMTE+F +C ++ GK EWS LF PFF + Y+Q+++ A
Sbjct: 319 NVQRSTLEVMTEEFAAAADVCT--SFLHCPPGKPIEWSRLFTPVPFFTQHSFYIQLEVSA 376
Query: 121 ADADDLLTWKGWVESRFRQLTLKIE 145
DL+ W GWV SR R+L +E
Sbjct: 377 DSEGDLVLWDGWVSSRIRRLVRNLE 401
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+PR D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ +++V+ + +I E I +GK WS LF + FF + Y+ Y+ V
Sbjct: 319 FNITRSSMKVINRELSRALQISE-----SIMVGKRPWSDLFVKHTFFTQGYKYYISVISS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQ 146
A +D W G+VES+ R L K+EQ
Sbjct: 374 AKSKEDHKIWSGYVESKVRMLVQKLEQ 400
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM---GELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
L+ +FF V+++W WPNPV++ I +LGF WDPR NP DR H MPIITPAY N
Sbjct: 262 LLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPGDRYHLMPIITPAYPQQN 321
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI 118
S++ VS+ T ++M ++F G + E ++ GKA W LF FF Y +Y+ +
Sbjct: 322 STFNVSMSTRKIMCDEFFIGLKNTE-----DVISGKANWDRLFTPPNFFHKYRHYIVLSA 376
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIEQD 147
+ ++ L W G VES+ R L +E +
Sbjct: 377 SSNTEEEHLEWIGLVESKVRLLISYLENN 405
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSV--WDPRKNPKDRSHRMPIITPAYHCMNS 59
+V FF++ W WP+PVM+ +E G + W+P+ NP DRSHRMPIITP+Y M S
Sbjct: 259 VVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNPTDRSHRMPIITPSYPSMCS 318
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ V T +++ + + I + +I G A W+ LF+ + FFE Y YLQ+ +V
Sbjct: 319 THNVIPSTQRIIMGEIKQAAEIVQ-----KIRTGSATWARLFQSHNFFEIYMQYLQITVV 373
Query: 120 AADADDLLTWKGWVESRFRQLTLK 143
A + + L W G VE+R RQL L+
Sbjct: 374 ADNYNLQLKWAGLVEARLRQLLLE 397
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 32/262 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV R F +++ W WP+PV++ + ++ L +WDPR DR H MPIITPA+
Sbjct: 284 LVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPRHKNTDRFHLMPIITPAFPE 343
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ V+ T Q++ ++ IC +I G+A+WSALFE FF Y++++ +
Sbjct: 344 QNSTHNVTRSTHQIIKDEIWEALEICR-----DIHDGRAKWSALFEEVNFFSRYKHFIAL 398
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
+ A + ++ L++ G++ESR R L +E++ + +L H PNK+ KP N+ F
Sbjct: 399 IMAAPNEEEELSYGGFLESRIRLLVQSLERNPDIIL-AHNDPNKH----KPSKNAKFDVS 453
Query: 177 LSRKEVGT-------SKECQQFDFQGTVKNFRRGIDNYRVRREG------RDIYFSYVCR 223
K + ++ + D ++ F+ ++ +G +I YV R
Sbjct: 454 PENKRITVWFIGLEFAEHAKNLDLTNEIQRFKTNVELQASSVKGIGPTCQVEIDMFYVKR 513
Query: 224 RHLPSFV----FPDGYKWHRPS 241
+L + G +W + S
Sbjct: 514 NNLIQVISAADLSRGRRWKKSS 535
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V QWRWP PV++ PI G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ ++ ++ + + G I E EI +GK WS LF + FF + Y Y+ V
Sbjct: 319 FNITRSSMTIIQRELRRGLEISE-----EIMVGKRPWSDLFVKHTFFTQGYRYYISVVSA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+ + + W G+VES+ R L K+EQ ++ L HP+ NK D C N
Sbjct: 374 SKNKEAHKVWSGYVESKVRMLVQKLEQHSSIAL-AHPF-NKGYDRRHLCKN 422
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ T+W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ +SL T V+ + Q G I + +I + W+ LF + FF + Y+ YLQ+
Sbjct: 319 HNISLSTKAVILRELQRGGDIVD-----KIFAKQLTWNDLFTRHTFFSKDYKYYLQITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ N + HP+P +
Sbjct: 374 SKTKEADSVWSGLVESKLRHLVGALDRK-NIIAVAHPFPKGF 414
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 82/144 (56%), Gaps = 5/144 (3%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V +FF V+ +W+WP PV + + LGF VWD R N +DR H MPIITPAY NS++
Sbjct: 475 VHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPIITPAYPQPNSTFH 534
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 122
VS T +VM +F G +I + EI LGKA W LFE FF Y + + + + +
Sbjct: 535 VSSSTRKVMLNEFNSGMQITD-----EIMLGKAGWDKLFEAPSFFFKYRYVIVLLVTSNN 589
Query: 123 ADDLLTWKGWVESRFRQLTLKIEQ 146
DD L W VES+ R L +E+
Sbjct: 590 TDDHLEWCEMVESKIRYLIQNLER 613
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 22/216 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV R F +++ W WP+PV++ + ++ L VWDPR+ DR H MPIITPA+
Sbjct: 259 LVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPE 318
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ V+ T V+ + IC +I GK++W+ALFE FF Y++++ +
Sbjct: 319 QNSTHNVTRSTATVIKNEICEALEICR-----DISEGKSKWTALFEEVNFFSRYKHFIAL 373
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
+ A + ++ L + G++ESR R L +E++ + ++ H PNK+ KP PN+ F
Sbjct: 374 IMAAPNEEEELNYGGFLESRIRLLVQSLERNQD-IIIAHNDPNKH----KPSPNAKFDVN 428
Query: 177 LSRKEVGT-------SKECQQFDFQGTVKNFRRGID 205
K V ++ + D ++ F+ ++
Sbjct: 429 PENKRVTVWFIGLEFAEHAKTLDLTNEIQRFKTNVE 464
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ ++ ++ ++ + + +I E I +G WS LF + FF A Y+ Y+ V
Sbjct: 319 FNITRSSMTIINRELKRALQISE-----SIMVGMRPWSDLFAKHSFFTAGYKYYISVISA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
A + W G+VES+ R L K+EQ + L HP+ Y
Sbjct: 374 AKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 96/173 (55%), Gaps = 7/173 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PVM+ IE G+LG VW+P+ DR+H MPIITPA+ M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
V TL++M ++F ++I + I G +W+ALFE + FF + ++ YL V +
Sbjct: 323 TVMPSTLRIMKDEFGRADKILQ-----HIFAGTKDWNALFERHSFFTKDHKYYLSVVAAS 377
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF 173
+ T+ G V+S+ R + I+ G+ PY N Y + C + F
Sbjct: 378 RTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYIN-YFERYHRCKDDQF 429
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 6/161 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PVM+ IE G+LG VW+P+ DR+H MPIITPA+ M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
V TL++M ++F ++I + I G +W+ALFE + FF + ++ YL V +
Sbjct: 323 TVMPSTLRIMKDEFGRADKILQ-----HIFAGTKDWNALFERHSFFTKDHKYYLSVVAAS 377
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ T+ G V+S+ R + I+ G+ PY N +
Sbjct: 378 RTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYF 418
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 14/153 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF + +W+WP PV++ IE G L +W+P+ P DR+HRMPIITP+Y MNS++
Sbjct: 255 IVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMPIITPSYPSMNSTH 314
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T VM +F+ G I +I+ G+A W+ LF + FF + +YLQ + A
Sbjct: 315 NVSYSTQTVMIHEFKRGLDIVG-----QIQKGEASWADLFNKHTFFTDFRHYLQ---IVA 366
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQC 154
ADD + W QL L+++ ++Q
Sbjct: 367 SADDQHSHDKW------QLVLRLDAQEGSIIQV 393
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 33/251 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
LV RFF + ++W W NPV +CPI E+G + F VW+P++ DRSH MP+ITPA+ M
Sbjct: 266 LVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITPAFPSM 325
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVD 117
NS+Y V+ T +++ + + +++ + + +W L +PFF Y Y+Q+
Sbjct: 326 NSTYNVTETTKRIIMGEIERAHKLTLPKKE------QVDWELLCHKFPFFCNYLYYVQIR 379
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNK--YIDPSKPCPNSAFFW 175
+ A + +KG+VESR R L +++ ++T G+ P+P + Y+ + NS ++
Sbjct: 380 VSALSSTAYRKYKGFVESRLR-LLVRMLENTPGIKSVRPWPEEMPYVVDGEVRENSCCWY 438
Query: 176 ------GLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIY-------FSYVC 222
LS G + C D + F I+ + +D Y +Y+
Sbjct: 439 IGLDFPKLSSMAAGQTVTC---DLRNCTSGFFDRINEW----SEKDTYHGQFEMDIAYIS 491
Query: 223 RRHLPSFVFPD 233
R LP + D
Sbjct: 492 RPKLPEHLVKD 502
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VS+ T V+ + Q G I + +I L + W+ LF + FF + Y+ YL +
Sbjct: 319 HNVSMSTKAVILRELQRGGDIVD-----KIFLKQMTWNDLFARHSFFTQDYKYYLSITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ N + HP+P +
Sbjct: 374 SKTKEAESVWSGLVESKIRHLVGALDRK-NTIAVAHPFPKGF 414
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 15 WPNPVMMCPI---EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVM 71
WP PV++ + L F VWDPR N D H MPIITP Y N+++ V+L + +M
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 72 TEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKG 131
TE+ + G I +I G+ EW ALFE FF+ Y++YL + + + D L W G
Sbjct: 63 TEELKDGFEIVS-----KIYEGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHG 117
Query: 132 WVESRFRQLTLKIEQD-TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQ- 189
+ ES+ R L +E++ L HP P ++ S +F GL+ ++
Sbjct: 118 YAESKLRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGLTFVKIENQNFVDL 177
Query: 190 QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
FD Q + + + ++G + +V RR L +V P+
Sbjct: 178 TFDIQSFTNTVHKQAYHINLMKDGMKVKIKHVKRRQLGLYVPPE 221
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ ++ ++ ++ + + +I E I +G WS LF + FF A Y+ Y+ V
Sbjct: 319 FNITRSSMTIINRELKRALQISE-----SIMVGMRPWSDLFAKHSFFTAGYKYYISVISA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
A + W G+VES+ R L K+EQ + L HP+ Y
Sbjct: 374 AKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MPIITPAY M ++
Sbjct: 263 VIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIITPAYPSMCAT 322
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ ++ ++ + Q G I E ++ +GK W+ LF + FF Y+ Y+ V
Sbjct: 323 FNITRSSMTIIKRELQRGLEITE-----QVMVGKQSWNDLFVKHTFFTTGYKYYISVVSA 377
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ D W G++ES+ R L K+E + L HP+ Y
Sbjct: 378 SKARDAHKLWSGYIESKVRMLVQKLEHHPHIAL-AHPFVKGY 418
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PVM+ IE G++G VW+P+ DR+H MPIITPA+ M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
V TL++M E+F ++I + +I K +W ALFE + FF + ++ YL V +
Sbjct: 323 TVMPSTLRIMKEEFGRADKILQ-----DIFANKKDWKALFERHTFFTKDHKYYLSVVAAS 377
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ T+ G V+S+ R + I+ G+ PY
Sbjct: 378 RTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPY 414
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 9/163 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM---GELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
L+ +FF V+++W WPNPV++ I +LGF +WDPR NP DR H MPIITPAY N
Sbjct: 264 LLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPGDRYHLMPIITPAYPQQN 323
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI 118
S+ VS+ T ++M ++F ++ ++ GKA W LF FF Y++Y+ +
Sbjct: 324 FSFSVSMSTRKIMCDEF-----FIRLKNTEDVISGKANWDILFTPPNFFHKYKHYIVLSA 378
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ ++ L W G VES+ R L +E + L H P Y
Sbjct: 379 SSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSY 420
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 70/110 (63%), Gaps = 5/110 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYE 111
VS+ T VM E+F+ G I + EI L KAEWS LFE FF+ Y+
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYK 372
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ T+W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ +SL T V+ + Q G + + +I + W+ LF + FF + Y+ YLQ+
Sbjct: 319 HNISLSTKAVILRELQRGGDMVD-----KIFAKQLTWNDLFTRHTFFSKDYKYYLQITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ N + HP+P +
Sbjct: 374 SKTKEAESVWSGLVESKLRHLVGALDRK-NIIAIAHPFPKGF 414
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF++Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL-QVDIV 119
+ ++ T +++ +F G I + G+ WS L E + FF Y+ YL V
Sbjct: 313 HNITSSTQKIIMSEFDRGVEIMN-----GVVSGQKSWSDLLERHDFFHKYKFYLCVVAAT 367
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
++ ++ + G VES+ R L K+EQ G+ HPY +
Sbjct: 368 KSNTEEHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSF 408
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 10/251 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRS--HRMPIITPAYHCMNS 59
L+ +FF +++ W WP PV++ ++ LG VWDPR N DR H MPIITPAY NS
Sbjct: 139 LIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPYHLMPIITPAYPQQNS 198
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ V++ T +M E + I + +I +GKA W LFE FF+ ++++ +
Sbjct: 199 TFNVTISTRTIMEEAIKTVLAITK-----DIAMGKASWDKLFEPSNFFDEXKHFVILSAS 253
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGL 177
+ + W G++ES+ R L +++ N + H P + + P + + GL
Sbjct: 254 SLTNKMSIEWSGFIESKIRHLIGSFDRNPN-ITFAHINPKSFPPLKPEEDEHGCMWLIGL 312
Query: 178 SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKW 237
+ ++ D + +K + + ++G YV R++L +++ + K
Sbjct: 313 TFRKAEKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYVRRKNLSNYIAANQIKR 372
Query: 238 HRPSRHFNEQS 248
R + +Q+
Sbjct: 373 GRKTSSSTQQN 383
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ VS+ T V+ + + G + + +I +G+ WS LF + FF A Y+ YL ++
Sbjct: 319 HNVSMSTKAVILRELRRGGDMVD-----KIFVGQRRWSDLFARHSFFSADYKYYLSINST 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ ++ + HP+P +
Sbjct: 374 STSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ VS+ T V+ + + G + + +I +G+ WS LF + FF A Y+ YL ++
Sbjct: 319 HNVSMSTKAVILRELRRGGDMVD-----KIFVGQRRWSDLFARHSFFSADYKYYLSINST 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ ++ + HP+P +
Sbjct: 374 STSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ VS+ T V+ + + G + + +I +G+ WS LF + FF A Y+ YL ++
Sbjct: 319 HNVSMSTKAVILRELRRGGDMVD-----KIFVGQRRWSDLFARHSFFSADYKYYLSINST 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ ++ + HP+P +
Sbjct: 374 STSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 18/239 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FF+V++ W W PV +C I+ G + F VWDP + +DR H MPIITPA+
Sbjct: 262 LIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSLQDRQHLMPIITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ V+ T +V+TE+ ++ + +L W + E F Y+++L +
Sbjct: 322 MNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQL----WEMVLEEEDVFSKYKHFLVI 377
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN--KYIDPSKPCPNSAFF 174
++ + W+GW+ SR R L K+E T Q P P K+ D +SAFF
Sbjct: 378 EVYGSSEHAHNKWEGWIGSRMRFLIKKLE--TLEYTQIRPLPGFFKFEDRDWEYASSAFF 435
Query: 175 WGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNY---RVRREGRDIYFSYVCRRHLPSFV 230
+ + Q FD + +++F+ I+ + ++ D+ Y+ + LP ++
Sbjct: 436 --AFKHTAPVVEGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNIRYLKSKQLPDYI 492
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 17/234 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE----MGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ + F V++ W WP+PV++ +E M L VWDPR+N DR H MPIITP++
Sbjct: 239 LIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNYADRLHLMPIITPSFPEQ 298
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVD 117
NS++ VS TLQV+ + + +ICE ++ GKA W L E FF Y + + V
Sbjct: 299 NSTHNVSRSTLQVIQNEMKEAFKICE-----HVQKGKATWKDLLEETNFFCKYRHLIAVS 353
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL 177
I A + + G+ ESR RQL +E+++ + K+ P P S +F GL
Sbjct: 354 INAEKEKEDTDFAGFFESRIRQLVQLLERNSQVQI-AQVNTRKFKAPFSPG-KSQWFIGL 411
Query: 178 SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGR-DIYFSYVCRRHLPSFV 230
+ + D +K F++ I N + G I +YV + L +++
Sbjct: 412 EFIQAA-----KNLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYVKKSKLITYI 460
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 15/161 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V++FF ++ QW WPNPV++ IE G + SVW+P+ + +D +HRMPIITPAY M +
Sbjct: 254 IVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRMPIITPAYPSMCT 313
Query: 60 SYKVSLGTLQV----MTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
++ ++ T+ V M Q +RI + W LFE FF Y++Y+Q
Sbjct: 314 THNITASTMSVIKNEMLRAMQVTDRIMSNPG--------SSWMELFEQIDFFSMYKSYVQ 365
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP 156
V A+ ++ + W G VESR R L +E N ++ HP
Sbjct: 366 VIASASTSEGIKDWGGTVESRIRTLVQDLENSDN-IITAHP 405
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L +W+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ ++ ++ ++ + + +I E I +GK WS LF + FF A Y+ Y+ V
Sbjct: 319 FNITRSSMAIINRELKRALQISE-----SIMVGKRPWSDLFVKHTFFTAGYKYYISVTSA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
A + W G+VES+ R L K+EQ + L H + Y
Sbjct: 374 AKTKEAHTIWSGYVESKVRMLVQKLEQHQSIAL-AHAFNKGY 414
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ + F +++ W WP PV++ I ++ +L VWDPR+N DR H MPIITPA+
Sbjct: 261 LIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQ 320
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ VS +++V+ ++ + IC+ +I G EW L E FF Y +++ +
Sbjct: 321 QNSTHNVSRSSMKVIQDEMKKALIICD-----KIHEGTLEWRDLLEEINFFSKYHHFIAL 375
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY-PNKYIDPSKPCPNSAFFW 175
+ A + L + G+ ESR RQL +E+ N ++Q P K+ D P S +F
Sbjct: 376 KLKAESVKEELAFGGFFESRIRQLVQILEK--NQVIQVAQINPRKFKDVKDP-KKSIWFI 432
Query: 176 GL----SRKEVGTSKECQQF 191
GL + K V + + QQF
Sbjct: 433 GLEFVANVKNVDLTSDIQQF 452
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PVM+ IE G++G VW+P+ DR+H MPIITPA+ M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
V TL++M E+F + I + +I K +W ALFE + FF + ++ YL V +
Sbjct: 323 TVMPSTLRIMKEEFGRADSILQ-----DIFANKKDWKALFERHTFFTKDHKYYLSVVAAS 377
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ T+ G V+S+ R + I+ G+ PY
Sbjct: 378 RTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPY 414
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 17/261 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W W PV +C I+ G + F VWDP+ NP DR H MPIITPA+
Sbjct: 262 LIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQHLMPIITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ V+ T +VMT++ + I + + +L + E F +Y+++L +
Sbjct: 322 MNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELV----LEEEDIFSSYKHFLII 377
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN--KYIDPSKPCPNSAFF 174
++ A W+GW+ SR R L K+E N Q P P K+ D +SAFF
Sbjct: 378 EVYGASEHAHGKWEGWIGSRMRFLIKKLENLPNT--QIRPLPGFFKFEDSEWEYASSAFF 435
Query: 175 WGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRD---IYFSYVCRRHLPSFVF 231
+ + + D + ++++F+ I+ + +D + +V LP +V
Sbjct: 436 ALKCLSNDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVNIRHVKSSQLPDYVQ 495
Query: 232 PDGYKWHRPSRHFNEQSGKPC 252
K RP E+S + C
Sbjct: 496 AKNSK-KRPLDEQLEKSKRVC 515
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 24/178 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-----PIEMGELG----FSVWDPRKNPKDRSHRMPIITP 52
+V RFFR++ W WPNPV++ P G+ ++ W+PR NP+DR+H PI+TP
Sbjct: 274 VVGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASRYAAWNPRLNPRDRAHLAPIVTP 333
Query: 53 AYHCMNSSYKVSLGTLQVMTEQFQCG----NRICEVRAYFEIELG---------KAEWSA 99
A+ MNSSY V L+ + ++ G R+ ++ A++ + + W
Sbjct: 334 AHPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAAHWRADESPTGDRAADLRDAWRR 393
Query: 100 LFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
LF FF + +Y+QVD+ AAD L W W ESR R L + + DT G ++ P+
Sbjct: 394 LFAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRLRNLVVAL--DTPGYVRARPH 449
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 61/318 (19%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V +FF +Y QW WP PV++ I+ G + SVW+P+ + +D++HRMP+ITPAY M S
Sbjct: 258 IVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ ++ T+ ++ ++ +I + ++ + W LFE FF Y+ Y+QV
Sbjct: 318 THNITSSTMSIIRKEMLRAMQITDEI----LKTPDSSWIPLFEKVDFFSMYKTYVQVVAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A+ +D + W G VESR R L +E +T+ ++ HP + F+ L+
Sbjct: 374 ASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---------NRVFYCLTE 423
Query: 180 KEVGTSKE----CQQFD-FQGTVKN----------FRRGIDNYRVRRE--GRDIYFSY-- 220
+E + + + D + VKN F G++ + +E GR + Y
Sbjct: 424 EEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPS 483
Query: 221 -----VC-------------------RRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVK 256
VC R LPS+VFPDG + +Q+G D
Sbjct: 484 KKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNG--SGDAG 541
Query: 257 MCQSCSSERQLKRKKEHE 274
M + KR K +
Sbjct: 542 MNDGSEGQGPSKRTKSEQ 559
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 61/318 (19%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V +FF +Y QW WP PV++ I+ G + SVW+P+ + +D++HRMP+ITPAY M S
Sbjct: 259 IVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 318
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ ++ T+ ++ ++ +I + ++ + W LFE FF Y+ Y+QV
Sbjct: 319 THNITSSTMSIIRKEMLRAMQITDEI----LKTPDSSWIPLFEKVDFFSMYKTYVQVVAS 374
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A+ +D + W G VESR R L +E +T+ ++ HP + F+ L+
Sbjct: 375 ASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---------NRVFYCLTE 424
Query: 180 KEVGTSKE----CQQFD-FQGTVKN----------FRRGIDNYRVRRE--GRDIYFSY-- 220
+E + + + D + VKN F G++ + +E GR + Y
Sbjct: 425 EEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPS 484
Query: 221 -----VC-------------------RRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVK 256
VC R LPS+VFPDG + +Q+G D
Sbjct: 485 KKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNG--SGDAG 542
Query: 257 MCQSCSSERQLKRKKEHE 274
M + KR K +
Sbjct: 543 MNDGSEGQGPSKRTKSEQ 560
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 61/318 (19%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
++ +FF +Y QW WP PV++ I+ G + SVW+P+ + +D++HRMP+ITPAY M S
Sbjct: 258 IIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
++ ++ T+ ++ ++ +I + ++ + W LFE FF Y+ Y+QV
Sbjct: 318 THNITSSTMSIIRKEMLRAMQITDEI----LKTPDSSWIPLFEKVDFFSMYKTYVQVVAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
A+ +D + W G VESR R L +E +T+ ++ HP + F+ L+
Sbjct: 374 ASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---------NRLFYCLTE 423
Query: 180 KEVGTSKECQ---------QFDFQGT------VKNFRRGIDNYRVRRE--GRDIYFSY-- 220
+E + + + + D + K+F G++ + +E GR + Y
Sbjct: 424 EEQAAASQGELTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPS 483
Query: 221 -----VC-------------------RRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVK 256
VC R LPS+VFPDG + +Q+G D
Sbjct: 484 KKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNG--SGDAG 541
Query: 257 MCQSCSSERQLKRKKEHE 274
M + KR K +
Sbjct: 542 MNDGSEGQGPSKRTKSEQ 559
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 140/318 (44%), Gaps = 37/318 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ E LGF VWDPR DR+
Sbjct: 273 LIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPRVTMSDRT----------------- 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
+M E F+ G I E EI +GKA W LFE FF Y +Y+ + ++
Sbjct: 316 --------IMQEAFETGLAITE-----EIIMGKASWDKLFEPPNFFGKYRHYIVLLASSS 362
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSR 179
A+D L W G VES+ R L +E++ N L H P + + P S +F GL+
Sbjct: 363 TAEDQLEWCGLVESKIRHLIGTLERNPNITL-AHINPESFPPLKPEAGKHVSMWFIGLTF 421
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 239
K+ D + V+ R + ++ + G I +V R+ L +++ + K R
Sbjct: 422 KKGENLNIDLTMDIKSFVETTERQAEQIKLFKNGMTIEAKHVKRKDLSNYIAANQIKRER 481
Query: 240 PSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 299
+ +++G + + ++ L+++K + E DK K I Q P
Sbjct: 482 KTSSSTQRNGNSSGNGGVSPRNQGDQTLRKRKSDQSLESN-DKKRK---IQDSEQQHQHP 537
Query: 300 GMTTEDPTNNSEVMSSGG 317
TT+ + + V+ S G
Sbjct: 538 QSTTQQKEDGTLVVQSCG 555
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 6/158 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PV++ IE G +G VW+P+ DRSH MPIITPA+ M S++
Sbjct: 261 IVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDRSHLMPIITPAFPSMCSTH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
V TL++M E+FQ ++I + I G W ALFE + FF + ++ YL + +
Sbjct: 321 TVMPSTLRIMQEEFQRADQIMQ-----HIFAGTKTWDALFERHSFFTKDHKYYLTIVAAS 375
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 158
+ + G V+S+ R + I+ G+ PYP
Sbjct: 376 RTQEAHERFNGLVQSKVRHIVKGIDDGQTGIDTARPYP 413
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 42/289 (14%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV R F +++ W WP+PV++ ++ L VWDP K D+ H MPIITPA+
Sbjct: 259 LVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSDKFHLMPIITPAFPE 318
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ V+ + Q++ ++ ICE +I GKA+W LFE FF Y++++ +
Sbjct: 319 QNSTHNVTRSSSQIIKDEIWEALEICE-----QINDGKAKWKDLFEEVNFFSRYKHFIAL 373
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--- 173
+ A + ++ L++ G++ESR R L +E++ + +L H PNK+ KP N+ F
Sbjct: 374 IMAAPNEEEELSYGGFLESRIRLLVQSLERNPDIIL-AHNDPNKH----KPSKNAKFDVS 428
Query: 174 ---------FWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREG------RDIYF 218
F GL E TS D ++ F+ + +G +I
Sbjct: 429 PENKRITVWFIGLEFSEHATS-----LDLTNEIQRFKTNFELQASSVKGIGPTCQVEIDM 483
Query: 219 SYVCRRHLPSFV----FPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSS 263
+V +R+L + G +W + S+ N+ + V S SS
Sbjct: 484 FHVKQRNLIQVISAADLSRGRRWKKSSKKQNKGNSSNKLTVARTASTSS 532
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ +S ++ ++ + + G I E I +GK WS LF + FF + Y+ Y+ V
Sbjct: 319 FNISRSSMAIINRELRRGLEISE-----SIMVGKQPWSDLFVKHTFFTSDYKYYISVISA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G+VES+ R L K+EQ + L H + Y
Sbjct: 374 SKSKEAHNVWSGYVESKVRMLVQKLEQHPSIAL-AHAFNKGY 414
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V QWRWP PV++ PI G L VW+P+ D H MP+ITPAY M ++
Sbjct: 263 VIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCAT 322
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ ++ ++ V+ + + G I E +I +GK WS LF + FF + Y Y+ V
Sbjct: 323 FNITRSSMSVIQRELRRGLEISE-----QIMVGKRPWSDLFVKHTFFTSGYRYYISVVSA 377
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+ D + W G+VES+ R L K+EQ + L H + NK D C N
Sbjct: 378 SKDKEAHKVWSGYVESKVRMLVQKLEQHPSIAL-AHAF-NKGYDRRHRCKN 426
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LF+ FF+ Y+ Y+ +++A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITD-----EILLLKAEWSKLFDAPNFFQKYK-YVFYNLLAM 378
Query: 122 DA 123
A
Sbjct: 379 FA 380
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V QWRWP PV++ PI+ G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ ++ ++ ++ + + G I E +I +GK WS LF + FF + Y Y+ V
Sbjct: 319 FNITRSSMTIIQRELRRGLEISE-----QIMVGKRPWSDLFVKHTFFTSGYRYYISVISA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+ D + W G+VES+ R L K+EQ + L H + NK D C N
Sbjct: 374 SKDKEAHKIWSGYVESKVRMLVQKLEQHPSIAL-AHAF-NKGYDRRHLCRN 422
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ RFF++ W WPN + + ELG VW+ R N H MPIITPAY MNSS
Sbjct: 249 LLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYPVMNSSA 305
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS TL VMT +F G + V + + + +S LFE FF Y +YL VD++A+
Sbjct: 306 NVSRFTLDVMTSEFSRGLEV--VNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMAS 363
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNG 150
D+ W GWVESR R++T + ++ G
Sbjct: 364 SEDEHRAWVGWVESRLRKVTNRFRMESVG 392
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VS+ T V+ + Q G I + +I L + W+ LF + FF Y+ YL +
Sbjct: 319 HNVSMSTKTVILRELQRGGDIVD-----KIFLKQNTWNDLFARHSFFTRDYKYYLSITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + + HP+P +
Sbjct: 374 SRTKEAEAVWSGLVESKIRHLVGALDRKST-IAVAHPFPKGF 414
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF Y+ W+WP PV +C I VWDP+ P D+ H+MP+ITP Y +NS++
Sbjct: 251 IVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPADKYHKMPVITPVYPSINSTH 310
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T ++ + GN E+ KA +S LFE FF+ ++ +++V I +
Sbjct: 311 NVTQSTFILICSELARGN---------ELMRSKAPFSKLFEVSGFFKKHKMFIEVRINSE 361
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS--- 178
D W+G+++S+ R L K+E N L P+P + S N+ G +
Sbjct: 362 DLQAFNIWEGYIQSKIRILCTKLENLENISLAA-PFPKAFTGRSCKASNTDNIGGAASTG 420
Query: 179 RKEVGTSKECQQF 191
K G S + +++
Sbjct: 421 SKSSGISNKIEEY 433
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 92/163 (56%), Gaps = 8/163 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDP--RKNPKDRSHRMPIITPAYHCMNS 59
++S+FF + +W+WP PVM+ E+ E G VW+P + P D H MP+ITPA+ M S
Sbjct: 261 ILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSYPPDARHLMPVITPAFPAMCS 320
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDI 118
++ V+ T Q+M E+FQ ++I VR F G+ W ALF ++ FF + ++ YL V
Sbjct: 321 THTVTTSTKQIMMEEFQRADKI--VRDVFN---GQGTWEALFNNHSFFTQDHKYYLSVIA 375
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + LT+ G V+S+ R L I+ G+ P+P +
Sbjct: 376 ASRTKEADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGF 418
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VS+ T V+ + Q G I + +I L + W+ LF + FF Y+ YL +
Sbjct: 319 HNVSMSTKTVILRELQRGGDIVD-----KIFLKQNTWNDLFARHSFFTRDYKYYLSITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + + HP+P +
Sbjct: 374 SRTKEAEAVWSGLVESKIRHLVGALDRKST-IAVAHPFPKGF 414
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS+ T VM E+F+ G I + EI L KAEWS LF+ FF+ Y+ Y+ +++A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITD-----EILLLKAEWSKLFDAPNFFQKYK-YVFYNLLAM 378
Query: 122 DA 123
A
Sbjct: 379 FA 380
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ +S ++ ++ + + G I E I +GK WS LF + FF + Y+ Y+ V
Sbjct: 319 FNISRSSMAIINRELRRGLEISE-----SIMVGKRPWSDLFVKHTFFTSDYKYYISVISA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G+VES+ R L K+EQ + L H + Y
Sbjct: 374 SKSKEAHNVWSGYVESKVRMLVQKLEQHPSIAL-AHAFNKGY 414
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 12/174 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE------MGELGFSVWDPRKNPKDRSHRMPIITPAYH 55
LV +FF +YT+W WP+PV++ E M L VWDPR DR H MPI+TPA+
Sbjct: 397 LVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDRFHLMPIVTPAFP 456
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
NS++ V+ +L+++ + + G + +I GK WSALFE FF Y+++L
Sbjct: 457 QQNSTFNVTKSSLKIIMNEIEEG-----LVTINDIMKGKTGWSALFEEVNFFSRYKHFLA 511
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 169
+ ++A D L W G VES+ R L +E+ + CH + Y + P P
Sbjct: 512 LLCLSATEQDELVWCGLVESKIRFLIASLER-RESIRVCHVHTKYYQPRNDPFP 564
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ +S+ T V+ + Q G I + +I L + W+ LF + FF + Y+ YL +
Sbjct: 319 HNISMSTKAVILRELQRGGDIVD-----KIFLKQLTWNDLFARHSFFTQDYKYYLSITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + HP+P +
Sbjct: 374 SRTKEAEAVWSGLVESKIRHLVGALDRKPT-IAVAHPFPKGF 414
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/54 (88%), Positives = 51/54 (94%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAY 54
MLVSRFFRVYTQWRWPNPVM+CPIE ELGFSVWDPRKNP+DR+H MPIITPAY
Sbjct: 20 MLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDRTHHMPIITPAY 73
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ +S+ T V+ + Q G I + +I L + W+ LF + FF + Y+ YL +
Sbjct: 319 HNISMSTKAVILRELQRGGDIVD-----KIFLKQLTWNDLFARHSFFTQDYKYYLSITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + HP+P +
Sbjct: 374 SRTKEAEAVWSGLVESKIRHLVGALDRKPT-IAVAHPFPKGF 414
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VS+ T V+ + Q G I + +I L + W LF + FF + Y+ YL +
Sbjct: 319 HNVSMSTKAVILRELQRGGDIVD-----KIFLKQLRWEDLFARHTFFTKDYKYYLSITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + HP+P +
Sbjct: 374 SRTKEAESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 414
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VS+ T V+ + Q G I + +I L + W LF + FF + Y+ YL +
Sbjct: 319 HNVSMSTKAVILRELQRGGDIVD-----KIFLKQLRWEDLFARHTFFTKDYKYYLSITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + HP+P +
Sbjct: 374 SRTKEAESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 414
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 50 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 109
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VS+ T V+ + Q G I + +I L + W LF + FF + Y+ YL +
Sbjct: 110 HNVSMSTKAVILRELQRGGDIVD-----KIFLKQLRWEDLFARHTFFTKDYKYYLSITAS 164
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + HP+P +
Sbjct: 165 SRTKEAESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 205
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 276 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 335
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ +S+ T V+ + + G + + I +G+ WS LF + FF Y+ YL ++
Sbjct: 336 HNISMSTKAVILRELRRGGDMVD-----NIFVGQRRWSDLFARHSFFSGDYKYYLSINST 390
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ ++ + HP+P +
Sbjct: 391 STTKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 431
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 89 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 148
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VS+ T V+ + Q G I + +I L + W LF + FF + Y+ YL +
Sbjct: 149 HNVSMSTKAVILRELQRGGDIVD-----KIFLKQLRWEDLFARHTFFTKDYKYYLSITAS 203
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + HP+P +
Sbjct: 204 SRTKEAESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 244
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 104/216 (48%), Gaps = 44/216 (20%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W W PV++ I G FSVWDP KN KD+ H MPIITPA+ C
Sbjct: 342 LIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPC 401
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVR-----AYFEIELGKAE--------------- 96
MNS++ V+ T ++ ++F+ + I A + +A
Sbjct: 402 MNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVTPVSAPTTSSST 461
Query: 97 ------------WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKI 144
W+ + + F +Y+++L + I+A + +WKGW+ES+ R L K+
Sbjct: 462 TGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWIESKIRLLFKKL 521
Query: 145 EQDTNGLLQCHPYPNKYI---DPSKPCPNSAFFWGL 177
E T L+ PYP Y+ D C S+FF GL
Sbjct: 522 E--TINELKIRPYPKFYVYKKDKFYYC--SSFFIGL 553
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ VS+ T V+ + Q G + + +I + + W+ LF + FF + Y+ YL++
Sbjct: 319 HNVSMSTKNVILRELQRGGDMVD-----KIFMKQLTWNDLFARHSFFTKDYKYYLRITAA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + HP+P +
Sbjct: 374 STTKEADSVWSGLVESKIRHLVGALDRKPT-IAVAHPFPKGF 414
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 20/231 (8%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 261 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 320
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ +S+ T V+ + Q G I + +I +A W+ LF+ + FF Y+ YL V
Sbjct: 321 HNISMSTKAVILRELQRGGDIVD-----KIWAKQATWNDLFKKHSFFTNDYKYYLGVTAS 375
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--------IDPSKPCPNS 171
+ + W G VES+ R L +++ + HP+P + + ++ N
Sbjct: 376 SRTKEAESVWSGLVESKVRHLVGALDRKPT-IAVAHPFPKGFERIHIVSNEEEAEAVKNG 434
Query: 172 AFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGID-----NYRVRREGRDIY 217
+ + + T+ E + Q ++ R D N +GR IY
Sbjct: 435 SLKYQDKGTKTETTDEIKDAAHQAAAQSGREDTDVPGAANNTAANDGRIIY 485
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 96/194 (49%), Gaps = 38/194 (19%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W W PV++ I G FSVWDP KN KD+ H MPIITPA+ C
Sbjct: 344 LICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPC 403
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGK---------------------- 94
MNS++ V+ T ++ ++F+ + I Y E+ G
Sbjct: 404 MNSTHNVTYCTRSILIDEFKRAHYIIN---YMEMNPGANVTFVMNQANGIVTPVSTPSSN 460
Query: 95 ------AEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDT 148
+ W+ + + F Y+++L + I+A + +WKGW+ES+ R L K+E T
Sbjct: 461 SSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLLFKKLE--T 518
Query: 149 NGLLQCHPYPNKYI 162
L+ PYP Y+
Sbjct: 519 INELRIRPYPKFYV 532
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 43/212 (20%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W W PV++ I G FSVWDP KN KD+ H MPIITPA+ C
Sbjct: 339 LICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPC 398
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE-------------------- 96
MNS++ V+ T ++ ++F+ + I Y E+ G
Sbjct: 399 MNSTHNVTYCTRSILIDEFKRAHYIIN---YMEMNPGANVTFVMNQANGVVTPVSAPSSS 455
Query: 97 --------WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDT 148
W+ + + F Y+++L + I+A +WKGW+ES+ R L K+E T
Sbjct: 456 TTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLLFKKLE--T 513
Query: 149 NGLLQCHPYPNKYI---DPSKPCPNSAFFWGL 177
L+ PYP Y+ D C S+FF L
Sbjct: 514 INELKIRPYPKFYVYQKDKFDYC--SSFFIAL 543
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 88/170 (51%), Gaps = 8/170 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
M+V +FF V + W+WP + + E G L WDP N D+ H MP+ITPAY CMNS+
Sbjct: 259 MIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRWDKMHLMPVITPAYPCMNST 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ T V+ + + G+ I E EI GK +W LF FF EAY++Y+ V
Sbjct: 319 MSIMPSTKAVLLTELKRGHDIME-----EIYGGKKQWKDLFVKQKFFSEAYQHYICVITA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPNKYIDPSKPC 168
+ W G V+SR R+L IEQ D + + P+ NK ID C
Sbjct: 374 GKTKEAQQAWSGLVQSRLRRLIQGIEQSDADSVELVQPF-NKGIDRVHEC 422
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FF + W WP + + E +G VWDPR +D MP+ITPAY MNS Y
Sbjct: 259 VLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDSLALMPVITPAYPAMNSLY 318
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGK-AEWSALFEHYPFFEAYENYLQVDIVA 120
V TL+VMT +F +C ++ G+ +W LF PFF + Y+Q+++ A
Sbjct: 319 NVQRSTLEVMTAEFAAAAEVCT--SFLRCRGGQPLDWDRLFMPVPFFTQHTFYIQIEVSA 376
Query: 121 ADADDLLTWKGWVESRFRQLTLKIE 145
DL+ W GWV SR R+L +E
Sbjct: 377 DSEQDLVLWDGWVSSRIRRLVRNLE 401
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
+L+ RFF V+++W WP PV + +G E W P+ N DR+H MPIITP Y +N
Sbjct: 396 VLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQWCPQTNHHDRAHLMPIITPGYPSVN 455
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEI--ELGKAEWSALFEHYPFFEAYENYLQV 116
S+ V+ TL++M E+FQ G I E EI + W LF F Y+NYL +
Sbjct: 456 SAVNVNRATLRIMQEEFQRGRYIVE-----EITEKYAFGNWQNLFTPSEFLVRYDNYLVM 510
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
+ A + +DL W ++ SR R+L +E + HPYP P N++ ++
Sbjct: 511 RVQALNEEDLDQWSNYIASRLRKLVESLEVAI-PIRSVHPYPVLMPGTQDPGVNASGYYL 569
Query: 177 LSRKEVGTSKECQQFDF-----QGTVKNFRRGI----DNYRVRREGRDIYFSYVCRRHLP 227
L + + C+ TV R I D R+ G I Y LP
Sbjct: 570 LGFEVENRKRGCKSNTLCEEAKACTVSAMRYFIATEVDQCTERKPGMKIDLQYANWNALP 629
Query: 228 SFVFP 232
V P
Sbjct: 630 LCVLP 634
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 37/206 (17%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ +FF+VY+ W W PV++ I+ G F VWDP KN KD+ H MPIITPA+ CM
Sbjct: 331 LICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCM 390
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEVRAYFE--------IELGKA-------------- 95
NS++ V+ T ++ E+F+ + I + Y E I + K
Sbjct: 391 NSTHNVTYCTRNILIEEFKRAHSIIQ---YMEDENNIKSSIRMNKLWPNNNVNNINNSSN 447
Query: 96 -EWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQC 154
W + E F Y+++L + I+ + +WKGW+ES+ R L K+E T L+
Sbjct: 448 NVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TINELKI 505
Query: 155 HPYPNKYI---DPSKPCPNSAFFWGL 177
P+P Y + S C S+FF L
Sbjct: 506 RPFPKFYFYKKEKSYYC--SSFFIAL 529
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 6/141 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
+ VS+ T V+ + + G + + +I +G+ WS LF + FF A Y+ YL ++
Sbjct: 319 HNVSMSTKSVILRELRRGGDMVD-----KIFVGQRRWSDLFARHSFFSADYKYYLSINST 373
Query: 120 AADADDLLTWKGWVESRFRQL 140
+ + W G VES+ R L
Sbjct: 374 STTKEAQAIWSGLVESKLRHL 394
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF++Y+QW WP PV++ IE G L VW+P+ DR HRMP+ITPAY M +++
Sbjct: 256 IVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHRMPVITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T +++ ++FQ G I I G W L + + FF Y+ YL V VAA
Sbjct: 316 NITASTQKIILDEFQRGTTIMH-----GILDGTKNWLDLLQRHDFFHRYKFYLCV--VAA 368
Query: 122 DA---DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
++ L + G ES+ R L K+E G+ HPY
Sbjct: 369 TKSTYEEHLKYSGMFESKLRLLVQKLEM-VPGVELAHPY 406
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 6/147 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+ +FF ++++W WP PV++ + + +L +VWDPR N DR H MPIITPAY NS+
Sbjct: 267 LLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNVSDRFHLMPIITPAYPQQNST 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y VS T Q+M ++F+ + + K EW +LF+ FF+ Y++Y+ + +
Sbjct: 327 YNVSNSTRQIMMDEFKEALVVAN-----NVYANKDEWGSLFQPSDFFQKYKHYIVLVARS 381
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQD 147
D L W G VES+ R L +E++
Sbjct: 382 DTEDHQLEWVGLVESKIRILVGNLEKN 408
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +++ W+WP PV++ P+ VWDP+ P D+ HRMP+ITPAY M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T V+T +F + I L K ++ +FE FF Y+ +++V ++
Sbjct: 317 NVSNSTQHVITMEFSRAHEILS-------NLEKNDFRRIFELSDFFGRYKLFVEVLAMST 369
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ W+G+VESR R L K E + +L P+P +
Sbjct: 370 LEEGFTKWEGYVESRIRILASKFEA-VDDILYAIPFPKAF 408
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FF + +W WPNPV++ PIE G L VW+P+ D+ H MPIITPAY M ++
Sbjct: 260 VIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFHIMPIITPAYPSMCAT 319
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVDIV 119
Y +S +L ++ + + + I ++ I G+ +W LF + FF + Y+ Y+ V
Sbjct: 320 YNISQSSLSIIKRELERASEISQM-----IISGRQQWKDLFVKHTFFTSDYKYYISVISA 374
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQ 146
+ + D TW G+VES+ R L +E+
Sbjct: 375 STEKDAQNTWSGFVESKVRVLVQGLER 401
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL 114
VS T +M E+F+ G I + EI KA+WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITD-----EILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FFR+ +QW+WP PV++ I+ G+L VW+PR D H MPIITP+Y M +++
Sbjct: 261 VILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
++ T +++ + G I + I GKA W LF + FF + Y+ YL V +
Sbjct: 321 NITKSTKEIICRELARGGNITD-----RIMTGKASWKDLFVKHTFFTKNYKYYLSVISAS 375
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ L W G VES+ R L +E + L HP+
Sbjct: 376 TTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPF 411
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FFR+ +QW+WP PV++ I+ G+L VW+PR D H MPIITP+Y M +++
Sbjct: 261 VILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
++ T +++ + G I + I GKA W LF + FF + Y+ YL V +
Sbjct: 321 NITKSTKEIICRELARGGNITD-----RIMTGKASWKDLFVKHTFFTKNYKYYLSVISAS 375
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ L W G VES+ R L +E + L HP+
Sbjct: 376 TTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPF 411
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 115/254 (45%), Gaps = 24/254 (9%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
+ +FF V+ WRWPNPVM+ ELG VW+ + R P+ITPAY MNS+
Sbjct: 294 LRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQAANMR-QVAPMITPAYPAMNSTLS 352
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE---------WSALFEHYPFFEAYENY 113
VS TLQ++ E+F G+ I + + Y + + G + W LFE FF AY Y
Sbjct: 353 VSRQTLQILHEEFCRGHGIVD-KLYKDYQRGAIDPADVESGGMWGELFEPSDFFIAYPYY 411
Query: 114 LQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY----------ID 163
L + I D W G+VESR R+L + + L + +P K+ +
Sbjct: 412 LSLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDVCCADKTALLT 471
Query: 164 PSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRR-GIDNYRVRREGRDIYFSYVC 222
++ + +F G ++ E Q D + + NFR+ + + G DI
Sbjct: 472 HAQRANSITYFIGFRVDKLRMRGE--QLDIERQLSNFRKFELGRFHPLVPGMDILPKSFG 529
Query: 223 RRHLPSFVFPDGYK 236
+ LP+ F Y+
Sbjct: 530 VKELPTICFDGTYE 543
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL 114
VS T +M E+F+ G I + EI KA+WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITD-----EILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL 114
VS T +M E+F+ G I + EI KA+WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITD-----EILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FFR+ +W+WP PV++ I+ G+L VW+PR D H MPIITP+Y M +++
Sbjct: 261 IILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKSDSFHLMPIITPSYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
V+ T +++ + G I + I +GKA W LF+ + FF + Y+ YL V +
Sbjct: 321 NVTKSTKEIICRELARGGNIVD-----RIMMGKAPWKDLFQKHTFFTKNYKYYLSVISAS 375
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ L W G VES+ R L +E + L HP+
Sbjct: 376 TTKEAQLIWAGLVESKVRLLVTNLETHESIAL-AHPF 411
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYL 114
VS T +M E+F+ G I + EI KA+WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITD-----EILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ +W+WP PV++ I G L VW+PR D H MPIITPAY M +++
Sbjct: 261 VVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKHDSFHLMPIITPAYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVA 120
++ T +++ + + G I + +I GK +W LF + FF E Y+ YL V +
Sbjct: 321 NITRSTKEIIQRELKRGGNITD-----QIMSGKLQWKDLFAKHTFFTEGYKYYLSVISAS 375
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 157
+ W G VES+ R L L +E + + HP+
Sbjct: 376 TTREAQNIWGGLVESKIRLLVLSLEGH-DSIALAHPF 411
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 48/220 (21%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ +FFRVY+ W W PV++ I+ G F++WDP KN KD+ H MPIITPA+ CM
Sbjct: 330 LICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITPAFPCM 389
Query: 58 NSSYKVSLGTLQVMTEQFQ-----------------------CGNRICEVRAYFEIELGK 94
NS++ V+ T ++ E+F+ N + A +GK
Sbjct: 390 NSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMSHGNAININNVGK 449
Query: 95 AE--------------WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
+ WS + E + F+ Y+++L + I+ + WKGW+ES+ R L
Sbjct: 450 SGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIESKIRLL 509
Query: 141 TLKIEQDTNGLLQCHPYPNKYI---DPSKPCPNSAFFWGL 177
K+E T L+ P+P Y D C S+FF L
Sbjct: 510 FKKLE--TINELKIRPFPKFYTYKKDKFYYC--SSFFIAL 545
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MP+ITPAY M ++
Sbjct: 264 VIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGDQFHLMPVITPAYPSMCAT 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
Y ++ + V+ ++ Q G I + I LG++ WS LF + FF + Y+ Y+ V
Sbjct: 324 YNITRSAMTVIQQELQRGCDITDA-----IMLGRSPWSDLFVKHTFFTQGYKYYISVITS 378
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ D + W G+VES+ R L +EQ + L H + Y
Sbjct: 379 STDKEAHKVWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY 419
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 124/252 (49%), Gaps = 27/252 (10%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ RFF VY+ W+W N PV++C I+ G F +W+P+ N +DR H +PIITPA+
Sbjct: 365 LIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDRHHLLPIITPAFPS 424
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ VSL T +V+T++F RI +V + E+ E L F +++++L++
Sbjct: 425 MNSTHNVSLSTKRVITDEFANAKRIFDVWDK-KKEISWTEALHLVLKPLDFTSFKHFLEL 483
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPS-------KPCP 169
I A + W GWVES+ R L ++E+ L C P+ P +P P
Sbjct: 484 QIFAQNETVHRKWLGWVESKVRFLVRQLER----LAACPPFAAGGHTPKSEAAMTVRPIP 539
Query: 170 NSAFF----WGLSRKEVGTSKECQQ---FDFQGTVKNFRRGIDNY--RVRREGR-DIYFS 219
+ F W + + QQ D + F I+ + R + EG+ +
Sbjct: 540 CTFSFQEPGWEYASSMLVALNFAQQPCVIDLRPAAGEFVDLINQWPERAQLEGQIQLRVK 599
Query: 220 YVCRRHLPSFVF 231
+V R LP++V
Sbjct: 600 HVRRSQLPAYVL 611
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 86/163 (52%), Gaps = 12/163 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ RFF V W+WP + +C E +LG VW+ +R H MPI+TPAY MNSS+
Sbjct: 262 LLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVG-NNRYHVMPILTPAYPSMNSSF 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEI-ELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
VS +L VM ++F+ +I + EI G EW LFE FF ++YL VD+
Sbjct: 321 NVSTHSLAVMKQEFERALKIVQ-----EILNRGAVEWDPLFESSDFFAVQQHYLAVDVYT 375
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCH--PYPNKY 161
+ +D W + ESR R+L IE + CH +P ++
Sbjct: 376 TNREDEQAWCSFCESRIRKL---IESLAYIPMLCHLRAFPKRF 415
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 54/223 (24%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ +FFRVY+ W W PV++ I+ G F++WDP KN KD+ H MPIITPA+ CM
Sbjct: 330 LICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITPAFPCM 389
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEI--------------------------E 91
NS++ V+ T ++ E+F+ + I Y ++
Sbjct: 390 NSTHNVTYCTRSILIEEFKRAHSIIN---YMDLNPDADIGQVMEHVNNLMSYGNAININN 446
Query: 92 LGKAE--------------WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRF 137
+GK+ WS + E + F+ Y+++L + I+ + WKGW+ES+
Sbjct: 447 VGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIESKI 506
Query: 138 RQLTLKIEQDTNGLLQCHPYPNKYI---DPSKPCPNSAFFWGL 177
R L K+E T L+ P+P Y D C S+FF L
Sbjct: 507 RLLFKKLE--TINELKIRPFPKFYTYKKDKFYYC--SSFFIAL 545
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 27/242 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +++ W+WP PV++ P+ VWDP+ P D+ HRMP+ITPAY M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T V+T +F ++I + + ++ +FE FF Y +++V +++
Sbjct: 317 NVSNSTQHVITMEFTRAHKILS-------DPERNDFRRIFELSDFFSRYRLFVEVLAMSS 369
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-------------IDPSKPC 168
+D W+G++ES+ R L K E + +L P+P + ++ K C
Sbjct: 370 CEEDFPKWEGYLESKIRILASKFEA-VDDVLYAIPFPKAFRVAEESIEKIGPRMEGMKKC 428
Query: 169 PNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPS 228
+AFF + V K + VK F + Y R G I + + R+ +
Sbjct: 429 --TAFFIAIDVIPVKGKKVI----VEQQVKEFIEFVREYEGRASGMRIEVNSLKRKDVQG 482
Query: 229 FV 230
F+
Sbjct: 483 FL 484
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MP+ITPAY M ++
Sbjct: 264 VIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGDQFHLMPVITPAYPSMCAT 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
Y ++ + V+ ++ Q G I + I LG+ WS LF + FF + Y+ Y+ V
Sbjct: 324 YNITRSAMTVIQQELQRGCDITDA-----IMLGRNPWSDLFVKHTFFTQGYKYYISVITS 378
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ D + W G+VES+ R L +EQ + L H + Y
Sbjct: 379 STDKEAHKVWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY 419
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 135/268 (50%), Gaps = 29/268 (10%)
Query: 2 LVSRFFRVYTQWRW--PNPVMMCPI--EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L++ FF+ YTQW W NP+++ I + + F++ + ++ MPIITPA+ M
Sbjct: 283 LLNYFFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADLFYEEKQTDLMPIITPAFPSM 342
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGK----AEWSALFEHYPFFEAYENY 113
N+++ VS T + M +F+ G +I E + K W LF+ + FF++Y ++
Sbjct: 343 NATFNVSHSTKRAMLIEFEKGLKITEALLARNEDGSKLHQEMNWRRLFKKFNFFKSYVHF 402
Query: 114 LQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDT---NGLLQCHPYPNKY-IDPSKPCP 169
+Q+ I++ A+D W G++ES+ R+L ++E+ G ++ P+P Y ++ + P
Sbjct: 403 IQIQILSKSAEDHKKWTGFIESKIRKLLQQLEKLNELKGGCMEFRPWPKSYHLENNLDFP 462
Query: 170 -NSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNY---------RVRREGRDIYFS 219
+ +++G+ K+ S + D T+K F + + + + + DI +
Sbjct: 463 MDDTYYFGIRIKK-NESDAQMRIDLTDTIKIFYKKLREWISVDHKLMQMIVDKLVDIKIN 521
Query: 220 YVCRRHLPSFVFPDGYKWHRPSRHFNEQ 247
Y+ R LP + P G +++ NEQ
Sbjct: 522 YIRRETLPDVIRPRG------AQNLNEQ 543
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 8/160 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +++ W+WP PV++ P+ VWDP+ P D+ HRMP+ITPAY M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T V+T +F +R E+ + E K ++ +FE FF Y+ +++V ++
Sbjct: 317 NVSNSTQHVITMEF---SRAHEILSNPE----KNDFRRIFELSDFFSRYKLFVEVLAMST 369
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ W+G+VES+ R L K E + +L P+P +
Sbjct: 370 SEEGFAKWEGYVESKIRILASKFEA-VDDILYAIPFPKAF 408
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V ++F Y+ W WP P+++ PI VWD +K P DR H+MPIITPAY M S++
Sbjct: 254 IVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHKMPIITPAYPSMCSTH 313
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V T ++ +F+ I + ++ +F++ FF Y+ Y+ + V A
Sbjct: 314 NVFQSTFDLICREFRRSTEIINN------SINSTDFLQIFDNTDFFRKYKLYINIK-VKA 366
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
D + + +W G+VES+ R L K E ++ P+P +I + C FF G+ +
Sbjct: 367 DKESIKSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPFI-KDETC---NFFIGIEILK 421
Query: 182 VGTSKECQQFDFQGTVKNF 200
G+ + D G +K F
Sbjct: 422 TGSQNKKIYVD--GQIKEF 438
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ +S+ T V+ + Q G I + +I + + W LF + FF Y+ YL +
Sbjct: 319 HNISMSTKAVILRELQRGGDIVD-----KIFMKQLSWQDLFARHTFFTHDYKYYLSITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + HP+P +
Sbjct: 374 SKTKEAESVWSGLVESKLRHLVGALDRKPI-VAVAHPFPKGF 414
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 26/181 (14%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKN-------PK------------ 41
++V +FFR+ QW WP PV++ IE G L VW+P+ PK
Sbjct: 266 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFIPKALTDFSFQIYHG 325
Query: 42 DRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALF 101
DR H MPIITPAY M +++ VS+ T V+ + + G + + +I +G+ WS LF
Sbjct: 326 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVD-----KIFVGQRRWSDLF 380
Query: 102 EHYPFFEA-YENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNK 160
+ FF A Y+ YL ++ + + W G VES+ R L +++ ++ + HP+P
Sbjct: 381 ARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKG 439
Query: 161 Y 161
+
Sbjct: 440 F 440
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM---GEL--GFSVWDPRKNPKDRSHRMPIITPAYHC 56
+V +FF V + W WP PVM+ IE +L GF VW+P P DR + MPIITPA+
Sbjct: 264 IVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNPAIYPGDRKNIMPIITPAFPS 323
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQ 115
M ++Y +S +V+ + + G I +I GKA+WS LF+ + FF A ++ YL
Sbjct: 324 MCATYNISKSGKKVILNELKRGGEITN-----KIFAGKAKWSDLFKKHTFFTADHKYYLS 378
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIE 145
+ + +AD W G VES+ R +++E
Sbjct: 379 ITASSLNADSAKAWAGLVESKVRIFVMQLE 408
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 40/341 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
L+ +FF ++++W WP PV + E GF+ VWDPR NP DRSH MPIITPAY NS
Sbjct: 251 LLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNS 310
Query: 60 SYKVSLGTLQVMTEQ----FQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
++ VS TL VM ++ ++ +I + + E W+ LF FF Y++++
Sbjct: 311 TFNVSRSTLSVMKQEIKDAYETTKQILQ-KTPNPDEPNTRLWADLFTRTDFFNKYKHFIV 369
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF-- 173
+ A + W G VES R+L +E++ L+ + +DP++ + +
Sbjct: 370 LSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILIAHVNVDSIELDPAEEGQSPRYVC 429
Query: 174 --FWGLS------RKEVGTSKECQQFD---FQGTVKNFRRGIDNYR--VRREGRDIYFSY 220
F GLS + + + + Q+F Q + + +NY +R E R Y
Sbjct: 430 RWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISH-----NNYTPDMRVEAR-----Y 479
Query: 221 VCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLK--RKKEHEIKEV 278
V R +L F+ P+ + + S+ + G+ + QS + ++ + K + KE
Sbjct: 480 VKRHNLVKFLTPELARTLKLSK---SKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKEN 536
Query: 279 RPDKSVKQAFISSEVPQPVSP---GMTTEDPTNNSEVMSSG 316
+ Q+ I+ ++ G TE NSE S+
Sbjct: 537 KEKLETHQSSITMAKDIAITTNFDGQRTERSVKNSEEESAA 577
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 10/144 (6%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V +FF V+ +W+WP PV + + LGF VWD R N +DR H M IITPAY NS++
Sbjct: 244 VHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFH 303
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 122
VS T +VM +F +I + EI LGKA W LFE FF Y ++ + + + +
Sbjct: 304 VSSSTRKVMLNEFNSDMQITD-----EIMLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNN 358
Query: 123 ADDLLTWKGWVESRFRQLTLKIEQ 146
DD L ES+ R L +E+
Sbjct: 359 TDDHLE-----ESKIRYLIQNLER 377
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 4/159 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSV-WDPRKNPKDRSHRMPIITPAYHCMNS 59
LV RFF V WRWP P+++ P G++ V WDP N DR+H MPIITP + +N+
Sbjct: 410 LVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQWDPAHNIHDRAHLMPIITPGFPAVNT 469
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
+ V+L TL+V+ E+F G RI + + + W+ LF Y++++ +++
Sbjct: 470 AVNVNLSTLRVLREEFARGQRIMDDLRRRSLS-HPSSWNQLFTPTEVLVRYDHHIAIELR 528
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 158
A + + L W +V SR R+L ++ Q T + HP P
Sbjct: 529 APNEEALAEWSSFVASRTRKL-VETLQHTPSVATLHPLP 566
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 40/341 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
L+ +FF ++++W WP PV + E GF+ VWDPR NP DRSH MPIITPAY NS
Sbjct: 264 LLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNS 323
Query: 60 SYKVSLGTLQVMTEQ----FQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
++ VS TL VM ++ ++ +I + + E W+ LF FF Y++++
Sbjct: 324 TFNVSRSTLSVMKQEIKDAYETTKQILQ-KTPNPDEPNTRLWADLFTRTDFFNKYKHFIV 382
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF-- 173
+ A + W G VES R+L +E++ L+ + +DP++ + +
Sbjct: 383 LSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILIAHVNVDSIELDPAEEGQSPRYVC 442
Query: 174 --FWGLS------RKEVGTSKECQQFD---FQGTVKNFRRGIDNYR--VRREGRDIYFSY 220
F GLS + + + + Q+F Q + + +NY +R E R Y
Sbjct: 443 RWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISH-----NNYTPDMRVEAR-----Y 492
Query: 221 VCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLK--RKKEHEIKEV 278
V R +L F+ P+ + + S+ + G+ + QS + ++ + K + KE
Sbjct: 493 VKRHNLVKFLTPELARTLKLSK---SKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKEN 549
Query: 279 RPDKSVKQAFISSEVPQPVSP---GMTTEDPTNNSEVMSSG 316
+ Q+ I+ ++ G TE NSE S+
Sbjct: 550 KEKLETHQSSITMAKDIAITTNFDGQRTERSVKNSEEESAA 590
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MP+ITPAY M ++
Sbjct: 264 VIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPKVYKGDQFHLMPVITPAYPSMCAT 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
Y ++ + V+ ++ G CE+ I +GK WS LF + FF + Y+ Y+ V
Sbjct: 324 YNITRSAMTVIQQELTRG---CEITD--NIMVGKNPWSDLFVKHTFFTQGYKYYISVITA 378
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ D + W G+VES+ R L +EQ + L H + Y
Sbjct: 379 STDKEAHKIWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY 419
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 27/182 (14%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK------------------- 41
++V +FFR+ QW WP PV++ IE G L VW+P+ +
Sbjct: 266 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFFIPRALADFSFQIYH 325
Query: 42 -DRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSAL 100
DR H MPIITPAY M +++ VS+ T V+ + + G + + +I +G+ WS L
Sbjct: 326 GDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVD-----KIFVGQRRWSDL 380
Query: 101 FEHYPFFEA-YENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN 159
F + FF A Y+ YL ++ + + W G VES+ R L +++ ++ + HP+P
Sbjct: 381 FARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPK 439
Query: 160 KY 161
+
Sbjct: 440 GF 441
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ +S+ T V+ + Q G + + +I + + W LF + FF Y+ YL +
Sbjct: 319 HNISMSTKAVILRELQRGGDMVD-----KIFMKQLSWHDLFARHTFFTHDYKYYLSITAS 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W G VES+ R L +++ + HP+P +
Sbjct: 374 SKTKEAESVWSGLVESKLRHLVGALDRKPI-IAVAHPFPKGF 414
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ RFF V W+WP + +C LG VW+ +R MPI+TPAY MNSS+
Sbjct: 262 LLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAG-HNRYQVMPILTPAYPSMNSSF 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS +L VM E+F+ G I + + G +EW LFE FF +++YL V++
Sbjct: 321 NVSTHSLTVMKEEFKRGLTIVQ----DVLSKGGSEWGPLFEPSDFFAVHQHYLAVEVYTE 376
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI--------DPSKPCPNSA- 172
++ W G+ ESR R+L + + L + Y K+ P+ PN A
Sbjct: 377 KQEEEAAWCGFCESRMRKLVESLAYNP-ALCRLRAYTKKFPLSFVTGGEAPAGEQPNGAA 435
Query: 173 ----------FFWG--LSRKEVGTSKECQQFDFQGTVKNFRRGIDNYR--VRREGRDIYF 218
F+ G + R+++ ++ +V+ F+ D YR R D+
Sbjct: 436 LAQPSKFGVCFYVGFDIDRRQL----RSREVSIDNSVEYFKNN-DLYRWNKRTPTMDVRV 490
Query: 219 SYVCRRHLPSFVFPD 233
+ V + LP VF D
Sbjct: 491 TPVVWKALPESVFED 505
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V +FF + W WP PV++ IE + +VW+P+ P DR+H+MPIITP+Y M
Sbjct: 262 VVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMC 321
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVD 117
+++ V ++ V+ ++ + G +I E EI LGK W LFE + FF ++ YL V
Sbjct: 322 ATHNVGRSSMAVIQQELERGVQIAE-----EIMLGKRPWKDLFEKHTFFTNGFKFYLTVI 376
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIE 145
+ TW G+VESR R L K+E
Sbjct: 377 SSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 6/154 (3%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV RFF VY+ W W N PV++C I+ G F VW+P+ N +DR H +PIITPA+
Sbjct: 473 LVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPS 532
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ VSL T +V+TE+F RI ++ + E+ E L F +++++L++
Sbjct: 533 MNSTHNVSLSTKRVITEEFANAKRIFDIWDK-KKEISWTEALHLVLKPLDFTSFKHFLEL 591
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNG 150
+ A + W GWVES+ R L ++E+ G
Sbjct: 592 QVFAQNETVHRKWLGWVESKVRFLVRQLERLAAG 625
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V +FF + W WP PV++ IE + +VW+P+ P DR+H+MPIITP+Y M
Sbjct: 262 VIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMC 321
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVD 117
+++ V ++ V+ ++ + G +I E EI LGK W LFE + FF ++ YL V
Sbjct: 322 ATHNVGRSSMAVIQQELERGVQISE-----EIMLGKRPWKDLFEKHTFFTNGFKFYLTVI 376
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIE 145
+ TW G+VESR R L K+E
Sbjct: 377 SSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V +FF + W WP PV++ IE + +VW+P+ P DR+H+MPIITP+Y M
Sbjct: 262 VIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMC 321
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVD 117
+++ V ++ V+ ++ + G +I E EI LGK W LFE + FF ++ YL V
Sbjct: 322 ATHNVGRSSMAVIQQELERGVQISE-----EIMLGKRPWKDLFEKHTFFTNGFKFYLTVI 376
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIE 145
+ TW G+VESR R L K+E
Sbjct: 377 SSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 104/233 (44%), Gaps = 16/233 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV FF V+++W PNPV++ E L VWD R NP DR PIITPAY NS+Y
Sbjct: 269 LVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
S+ T V+ E+F+ I + L K E S LFE FF+ Y++Y+ + A
Sbjct: 329 SASISTQMVVVEEFKXSLSITDXL------LSKVEXSKLFEAPIFFQKYKDYIVLLAGAP 382
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLL-----QCHPYPNKYIDPSKPCPNSAFFWG 176
L W G VES+ L +E++ L Q P P + D + C + + G
Sbjct: 383 TEKQRLEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFPAPKENPDKKEFC--TVWVIG 440
Query: 177 LSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
L K+ K D Q R N ++ I ++V R+ L
Sbjct: 441 LVFKKTENYKNLSVNLXHDIQAFTDTVYRQARNSKMFEVDMRIAATHVKRKQL 493
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 6/154 (3%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV RFF VY+ W W N PV++C I+ G F VW+P+ N +DR H +PIITPA+
Sbjct: 443 LVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPS 502
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ VSL T +V+TE+F RI ++ + E+ E L F +++++L++
Sbjct: 503 MNSTHNVSLSTKRVITEEFANAKRIFDIWDK-KKEISWTEALHLVLKPLDFTSFKHFLEL 561
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNG 150
+ A + W GWVES+ R L ++E+ G
Sbjct: 562 QVFAQNETVHRKWLGWVESKVRFLVRQLERLAAG 595
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 6/154 (3%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV RFF VY+ W W N PV++C I+ G F VW+P+ N +DR H +PIITPA+
Sbjct: 462 LVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPS 521
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
MNS++ VSL T +V+TE+F RI ++ + E+ E L F +++++L++
Sbjct: 522 MNSTHNVSLSTKRVITEEFANAKRIFDIWDK-KKEISWTEALHLVLKPLDFTSFKHFLEL 580
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNG 150
+ A + W GWVES+ R L ++E+ G
Sbjct: 581 QVFAQNETVHRKWLGWVESKVRFLVRQLERLAAG 614
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 33 VWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIEL 92
VWDPR NP DR H MPIITPAY NS+Y VS+ T VM E+F+ G I + EI L
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITD-----EILL 55
Query: 93 GKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 145
KAEWS LFE FF+ Y++Y+ + A L W G VES+ R L +E
Sbjct: 56 SKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSV-WDPRKNPKDRSHRMPIITPAYHCMNS 59
LV RFF V WRWP P+++ P G+ V WDP+ N DR+H MPIITP + +N+
Sbjct: 391 LVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNT 450
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
+ V++ TL+V+ E+F G RI + + + W+ LF Y++++ +++
Sbjct: 451 AVNVNISTLRVLREEFARGQRIMDDLRRRSLS-HPSSWNQLFTPTEVLVRYDHHVAIELR 509
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN 159
A + + L W +V SR R+L ++ Q T + HP P+
Sbjct: 510 APNEEALAEWSSFVASRTRKL-VETLQHTPSISALHPLPD 548
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 9/170 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+V++FF V W+WP+P+ + E G L WDP+KN +D+ H MP+ITPAY MN++
Sbjct: 260 IVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNFRDKRHLMPVITPAYPVMNAT 319
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ T +V+ + G+ I +I GK +W L + FF AY++Y+ +
Sbjct: 320 HTITRSTKEVLIRELNRGHEIMA-----DIYSGKKQWRDLLIKHEFFTSAYQHYIVIVTA 374
Query: 120 AADADDLLTWKGWVESRFR-QLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 168
+ DD W G V SR R +L IE + + P+ NK I+ C
Sbjct: 375 SKTKDDQQAWAGLVTSRLRFKLVEGIEDSADKVNLVQPF-NKGIERHHKC 423
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSV-WDPRKNPKDRSHRMPIITPAYHCMNS 59
LV RFF V WRWP P+++ P G+ V WDP+ N DR+H MPIITP + +N+
Sbjct: 391 LVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNT 450
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
+ V++ TL+V+ E+F G RI + + + W+ LF Y++++ +++
Sbjct: 451 AVNVNISTLRVLREEFARGQRIMDDLRRRSLS-HPSSWNQLFTPTEVLVRYDHHVAIELR 509
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN 159
A + + L W +V SR R+L ++ Q T + HP P+
Sbjct: 510 APNEEALAEWSSFVASRTRKL-VETLQHTPSISALHPLPD 548
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 110/244 (45%), Gaps = 24/244 (9%)
Query: 1 MLVSRFFRVY--------TQWRWPNPVMM----CPIEMGELGFS--VWDPRKNPKDRSHR 46
MLV+R ++Y WP PV++ G +GF +WDPR DR H
Sbjct: 441 MLVARTCQLYPRAAPNVLVNKEWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDRYHL 500
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPF 106
MPIITPA+ NS++ VS T ++ + G + E+ W LFE F
Sbjct: 501 MPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLVST-----EVICKGLSWPKLFEPSNF 555
Query: 107 FEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSK 166
F Y++Y+ + AA DL+TW G VES+ R L + E +T G+L H P ++ +
Sbjct: 556 FVKYKHYIVISCFAATRADLITWSGLVESKMRYLIGQFEHNT-GVLLAHVNPEQFSPLEE 614
Query: 167 PCPNSAFFW--GL--SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVC 222
FW GL +++ +G D Q V + R N V R+G + Y
Sbjct: 615 HGDGVESFWVVGLEMNKEGIGAKNIDLTSDIQSFVDSIMRQALNSDVWRQGMKVEAKYRR 674
Query: 223 RRHL 226
RR L
Sbjct: 675 RREL 678
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
++V++FF V +WRWP+PV +C E +LG V +NP +++ +MPIITP + CMN+
Sbjct: 258 VIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENPWEKADKMPIITPVFPCMNA 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDI 118
+ ++ L+V+ +FQ +I +I GK EW ALF FF E Y++YL +
Sbjct: 318 TGGLTASNLEVILREFQRALKITN-----DIHNGKQEWQALFARQTFFTEDYKHYLCLVT 372
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIE--QDTNGLLQCHPYPNKYIDPSKPC 168
+ + W G+V SR R+L IE Q + HP+ NK + C
Sbjct: 373 GSRTKEAQQAWSGFVSSRLRKLVSSIESPQSKTAVKLIHPF-NKGFEAMHEC 423
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 16/145 (11%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAY-HCMNSSY 61
V +FF V+++W+W +PV + + LGF VWDPR N + R H MPIITPAY H
Sbjct: 181 VHKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYPH------ 234
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
T +VM +F G +I + EI LGKA W LFE FF Y + + + +
Sbjct: 235 ----STRKVMLNEFSRGMQITD-----EIMLGKAGWDKLFEAPSFFFKYRYIIVLLVTSN 285
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQ 146
+ DDLL W VES+ R L +E+
Sbjct: 286 NTDDLLEWCELVESKIRYLIQNLER 310
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 7 FRVYTQWRWPNPVMMCPIEMG-ELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNSSYKV 63
FR++ +W W PV++ +++ ELG VW+P++N + ++ PI+TP Y NS+Y V
Sbjct: 151 FRIFAEWDWQKPVLVRDVQLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNV 210
Query: 64 SLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 123
T VM +F+ + I G+ W+ LF+ +PFF +Y+ Y+Q+++ A +
Sbjct: 211 MASTRDVMVAEFKRARDVT-----LSILKGETTWATLFKEFPFFTSYKYYIQIEVSAKTS 265
Query: 124 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 175
+ W G+VES+ R+ T IE + + ++ +P + Y+ P P F+
Sbjct: 266 EVFNNWYGFVESQIRRYTRMIEGNKSIVIHVYPTSFDVVRERGSSYVQPDSPLCKQ-FYI 324
Query: 176 GLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREG 213
+ E K D + F+ + RV R G
Sbjct: 325 AFTPLEAAKGKP---LDLSLATRQFKNHLQ--RVGRRG 357
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ RFF V W+WP + +C +LG VW+ +R MPI+TPAY MNSS+
Sbjct: 262 LLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAG-HNRYQVMPILTPAYPSMNSSF 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS +L VM E+F+ G I + + G +EW LFE FF +++YL V++
Sbjct: 321 NVSTHSLTVMKEEFKRGLTIVQ----DVLSKGGSEWGPLFEPSEFFAVHQHYLAVEVYTE 376
Query: 122 DADDLLTWKGWVESRFRQLT 141
D+ W + ESR R+L
Sbjct: 377 KQDEEQAWCSFCESRMRKLV 396
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE--MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V++FF + +W WP PV++ IE + VW+P+ DR+HRMPIITPAY M
Sbjct: 258 VVVNKFFHIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLYSSDRNHRMPIITPAYPAMC 317
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVD 117
+++ ++ + V+ ++ + G ++ E EI G+A W ALF + FF + + YL V
Sbjct: 318 ATHNINRSSKVVIMQELEKGVQVTE-----EIMTGRAPWKALFTKHTFFTSDFRYYLTVI 372
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+ D W G++ESR R L KIE ++ P+ NK D C N
Sbjct: 373 SSSRTKDAQNVWSGFIESRVRVLVNKIENHA-AIVLARPF-NKGYDRQHRCQN 423
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V+ WRWPNPVM+ ELG VW+ + R P++TPAY MNS+
Sbjct: 221 LLRKFFLVFKSWRWPNPVMLTKPHDAELGLPVWNSFQAANMR-QVAPMVTPAYPAMNSTL 279
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE---------WSALFEHYPFFEAYEN 112
VS TLQ++ E+F G+ + + + Y + + G + W LFE FF Y
Sbjct: 280 SVSRQTLQILHEEFCRGHNVVD-KLYKDFQKGALDKDKIESGDIWKELFEPSDFFIGYPY 338
Query: 113 YLQVDIVAADADDLLTWKGWVESRFRQLT 141
YL + IV D W G+VESR R+L
Sbjct: 339 YLSLCIVGPSQADAQAWAGFVESRLRKLV 367
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF V+ QW W PV++ + +L + W P N DRS M IITP Y NS++
Sbjct: 234 IVQKFFLVFNQWNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQIITPVYPHQNSTF 292
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T ++ E+ + G +IC EI L A+W+ FE FF Y++Y+ + A
Sbjct: 293 NVSKSTKTILLEEIERGLKICN-----EIFLRNAKWTDAFEPADFFGRYKHYIVLTAKAT 347
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
D+ W G VES+ R+L L +E++
Sbjct: 348 SEDNYKEWIGLVESKLRKLVLTLERN 373
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 44/279 (15%)
Query: 2 LVSRFFRVYTQW-----------------RWPN-PVMMCPIEMGELGFSVWDPRKNPKDR 43
++ +FFRVY+ W W N P+ + ++ LG WDPR NP+DR
Sbjct: 265 ILCKFFRVYSDWYGSNWIKHAREIWLAHGEWMNSPIKIKDVDDLHLGKRQWDPRSNPRDR 324
Query: 44 SHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICE--VRAYFEIELGKAEWSALF 101
MPIITP Y N+++ V+ TL + +F G+R+C+ +RA + WSA++
Sbjct: 325 YDLMPIITPVYPQQNAAFNVNESTLHRIVTEFSRGHRVCQDIMRASSNV-----PWSAVW 379
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
E FF+ Y+ +++V AA D ++G VES R L L + Q T+ + YP Y
Sbjct: 380 EPIRFFDEYQYFVRVVASAATESDRTEFEGLVESTVRHLVLNL-QYTDNVAYAMAYPKAY 438
Query: 162 I-DPSKPCPNSAFFWGLSRK------EVGTSKECQ------QFDFQGTVKNF-----RRG 203
DP + G R E G +E + + D QG + F R
Sbjct: 439 HEDPVADKDGTEATTGPWRTAWYLALEFGIKQEGRIEPAPSKLDLQGPLVAFYGRLRDRT 498
Query: 204 IDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 242
+ R ++ + + LP +++P G HR R
Sbjct: 499 VTMSRYDETTMNVDVQAMKQSKLPGYLYPGGVNPHRKVR 537
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +++ W+WP PV++ P+ VWDP+ P D+ HRMP+ITPAY M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T V++ +F + I K ++ +F+ FF Y+ + ++ ++
Sbjct: 317 NVSNSTQHVISMEFARAHEILSSPE-------KNDFRKIFDLSDFFSRYKLFAEILAMST 369
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ + W+G+VES+ R L K E + +L P+P +
Sbjct: 370 EEEGFPKWEGYVESKVRILASKFEA-VDDILYAIPFPKAF 408
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 82/148 (55%), Gaps = 13/148 (8%)
Query: 1 MLVSRFFRVYTQWRWPN--PVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
MLV+R ++ PN PV + + LGF VWDPR N + R MPIITPAY N
Sbjct: 174 MLVARTCQL------PNVVPVFLKRPDTVNLGFQVWDPRVNVQGRFDLMPIITPAYPQQN 227
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI 118
S++ VS T ++M +F G +I + EI LGKA W LFE FF Y ++ + +
Sbjct: 228 STFHVSSSTRKIMLNEFNRGMQITD-----EIMLGKAGWDKLFEAPSFFFKYRYFIVLLV 282
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIEQ 146
+ + DDLL W G VES+ R L +E+
Sbjct: 283 TSNNTDDLLEWCGLVESKIRYLIQNLER 310
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V++FF + +W WP PV++ IE G +VW+P+ DR+H+MPIITPAY M
Sbjct: 261 VIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLYASDRNHKMPIITPAYPSMC 320
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVD 117
+++ V T+ V+ ++ + G +I + EI +G+ W LF + FF ++ YL V
Sbjct: 321 ATHNVGNSTMAVIQQELEKGAQITD-----EIMVGRRPWKDLFTKHTFFTNGFKYYLTVI 375
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+ W G++ESR R L K+E + +L P+ Y
Sbjct: 376 SSSRTKQAQNAWSGFIESRVRLLVNKLEMHPDIVL-ARPFNKGY 418
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 7/121 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF++Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ ++ T +++ +F G I EI G+ WS L E + FF Y+ YL V VA
Sbjct: 313 HNITNSTQKIIMNEFNRGVEIIG-----EIFTGQKVWSHLLERHSFFHQYKFYLCV--VA 365
Query: 121 A 121
A
Sbjct: 366 A 366
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 20/259 (7%)
Query: 39 NPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWS 98
NP DR H MPIITPAY NS+Y VS+ T VM E+F+ G I + EI L KAEWS
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWS 56
Query: 99 ALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCH 155
LFE FF+ Y++Y+ + A L W G VES+ R L +E++ T +
Sbjct: 57 KLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ 116
Query: 156 PYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRRE 212
+P +P K + + GL K+ S+ +D Q R N ++
Sbjct: 117 SFPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV 176
Query: 213 GRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKE 272
I +V R+ L + PS ++ E V++ S L +
Sbjct: 177 DMKIAAMHVKRKQLHQLL---------PSHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSD 227
Query: 273 HEIKEVRPDKSVKQAFISS 291
+ + P ++K + ++S
Sbjct: 228 NSMSVPSPTSAMKTSPLNS 246
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 41/226 (18%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE-----MGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
+V R F +++ W WP+PV++ ++ + L +WDPRK DR H MPIITPA+
Sbjct: 259 IVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRFHLMPIITPAFPE 318
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ V+ T ++ + G IC+ +I GKA W LF+ FF Y++Y+ +
Sbjct: 319 QNSTHNVTRSTCHIIRNEICEGLEICK-----DITEGKATWEDLFKEVKFFSRYKHYIGI 373
Query: 117 DIVAADADDLLTWKG-----WVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNS 171
+D + +G ++ESR R L +E++ + +L H NK+ +P PN+
Sbjct: 374 ----SDHGYIHRRRGIELWRFLESRIRLLVQSLERNQD-ILIAHNDTNKH----RPSPNA 424
Query: 172 AF------------FWGLSRKEVGTSKECQQFDFQGTVKNFRRGID 205
F F GL E T+ D ++ FR ++
Sbjct: 425 KFDVRPENTRITIWFIGLEFAEHATN-----LDLTSEIQRFRTNVE 465
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ IE G L +W+P+ P DR H MPIITPAY M ++
Sbjct: 261 VVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCAT 320
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ + V+ + + + I +GK W LF+ + FF + ++ Y+QV
Sbjct: 321 FNITKSSKDVIGRELVKAADLTNL-----IMVGKLPWKDLFQKHTFFTKDFKYYIQVIAA 375
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQ 146
+ D + W G+VES+ R L +E+
Sbjct: 376 SKDKESHKLWSGFVESKVRLLVQGLER 402
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ IE G L +W+P+ P DR H MPIITPAY M ++
Sbjct: 261 VVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCAT 320
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ + V+ + + + I +GK W LF+ + FF + ++ Y+QV
Sbjct: 321 FNITKSSKDVIGRELVKAADLTNL-----IMVGKLPWKDLFQKHTFFTKDFKYYIQVIAA 375
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQ 146
+ D + W G+VES+ R L +E+
Sbjct: 376 SKDKESHKLWSGFVESKVRLLVQGLER 402
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ IE G L +W+P+ P DR H MPIITPAY M ++
Sbjct: 134 VVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCAT 193
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ + V+ + + + I +GK W LF+ + FF + ++ Y+QV
Sbjct: 194 FNITKSSKDVIGRELVKAADLTNL-----IMVGKLPWKDLFQKHTFFTKDFKYYIQVIAA 248
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQ 146
+ D + W G+VES+ R L +E+
Sbjct: 249 SKDKESHKLWSGFVESKVRLLVQGLER 275
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 81/161 (50%), Gaps = 10/161 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE-MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
M+V FF +++QW WP PV + E + L VWDPR NP D+ H MPI+TP+Y NS
Sbjct: 265 MIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYHLMPILTPSYPSQNS 324
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
+Y V ++ + + G + VRA + K WS LFE FF+ Y +Y+ V +V
Sbjct: 325 TYNVQRSNRIIIERELKQGLNV--VRASM---MHKGSWSNLFEAAFFFQ-YRHYVVVIVV 378
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPY 157
+ G VESR R L E + + CH Y
Sbjct: 379 GNTKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAY 419
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V++FF + +W WP PV++ IE G +VW+P+ DR+HRMPIITP+Y M
Sbjct: 260 VIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIYASDRNHRMPIITPSYPSMC 319
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVD 117
+++ V ++ V+ ++ + G ++ E +I GK W LF + FF + + YL V
Sbjct: 320 ATHNVGRSSMAVIKDELEKGVQVTE-----DIMRGKRPWKDLFTKHTFFTSGFRYYLTVI 374
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA 172
+ W G+VESR R L K+E + L P+ NK D C N+A
Sbjct: 375 SSSRTKKAQNVWSGFVESRVRLLVNKLEMHPSISL-ARPF-NKGYDREHRCKNNA 427
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 8/171 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MPIITPAY M ++
Sbjct: 262 VIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITPAYPSMCAT 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ + V+ + Q G CE+ + L K W LF + FF Y+ Y+ V
Sbjct: 322 FNITKSAMTVIQRELQRG---CEITD--NVMLSKRPWGDLFIKHTFFTSGYKYYISVVTT 376
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 170
+ + W G+VES+ R L +EQ + + H + NK D C N
Sbjct: 377 STTKEAHKIWSGYVESKVRVLVQGLEQHQS-IAIAHAF-NKGYDRRHVCHN 425
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V++FF + +W WP PV++ IE VW+P+ DR+H+MPIITPAY M
Sbjct: 260 VIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYASDRNHKMPIITPAYPSMC 319
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEA-YENYLQVD 117
+++ V ++ V+ ++ + G + E EI LG+ W LF + FF + ++ YL V
Sbjct: 320 ATHNVGRSSMVVIQQELKKGAEVTE-----EIMLGRRPWKDLFTKHTFFTSGFKYYLTVI 374
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA 172
+ W G++ESR R L KIE + L P+ NK D C N A
Sbjct: 375 SSSRTKKAQNVWSGFIESRVRLLVNKIEMHPSIAL-ARPF-NKGYDRMHRCKNDA 427
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + QW WP PV++ PI G L VW+PR D H MP+ITPAY M ++
Sbjct: 261 VIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDSYHLMPVITPAYPSMCAT 320
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ V+ ++ V+ + Q I I W +F + FF + ++ Y+QV
Sbjct: 321 FNVTRSSMTVIKRELQLAAEITN-----NIMCSTKPWKDMFAKHTFFTKDFKYYMQVISA 375
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQ 146
+ D + W G+VES+ R L +E+
Sbjct: 376 SRDKEAHKIWSGFVESKVRMLVQSLER 402
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 203 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 262
Query: 62 KVSLGTLQVMTEQFQ----CGNRICEVRAYFEIELGKAEWSALFEHYP 105
VS T VM E+F+ N I ++ +IE + L + P
Sbjct: 263 NVSTSTRTVMVEEFKQVYRQANNINMLKEGMKIEATHVKKKQLHHYLP 310
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 95/225 (42%), Gaps = 53/225 (23%)
Query: 5 RFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVS 64
RFF+V ++W+WP PVM+ I LGF +WDPR++ DRSH MPIITPAY MNSS +VS
Sbjct: 699 RFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVS 758
Query: 65 LGTLQVMTEQFQCGNRICEVRAYF--------------EIELGKA--------------- 95
T V+ E+ + E+ E +L A
Sbjct: 759 QPTFSVIYEELWRARYLAEIAVGISKPFPTAAPSPESSEADLKAAVVCMATSMPSFDQPL 818
Query: 96 --------------------EWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVES 135
W LF+ FF Y +Y+ + AA + W +V+S
Sbjct: 819 NAVDSTEGVVQTTQGFGEGSAWDKLFQPSNFFIRYSSYMVFNFQAASESAMHKWGKFVQS 878
Query: 136 RFRQLTLKIEQDTNGLLQCHPYPNKY---IDPSKPCPNSAFFWGL 177
R R+L + + + + H +P + D + P S F G+
Sbjct: 879 RLRKLVDNLHH-MSPVSRVHAFPRYFPHTCDAERRGPGSCMFIGI 922
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 32/216 (14%)
Query: 2 LVSRFFRVYTQWRW---PNPVMMCPIEMGELGFSVW-DPRKNPKDRSHR-MPIITPAYHC 56
L+ RFF +++QW+W P + C +W + + + H M I+TP Y
Sbjct: 250 LIERFFFIFSQWKWNELPVVIQKCD--------EIWRNSLFEQQQKQHNVMSILTPVYPY 301
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
+NS+Y VS T ++ EQ + N I + +I L + +WS L + FF+ Y YLQ+
Sbjct: 302 INSAYNVSNCTFTIIEEQLKLANIIMQ-----KICLSELQWSDLLKKIQFFDIYYTYLQI 356
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPNKYID-----PSKPCPN 170
++ + DDL+ WK +ES+ R+L +++ D N ++ H YP + P
Sbjct: 357 RALSKNKDDLIQWKSHIESKLRKLNKMLDEGDVNKAIEFHLYPKSFQTDYVQGDENDTPG 416
Query: 171 S------AFFWGLSRKEVGTSKECQQFDFQGTVKNF 200
S +FF+G+ K+ KE + D + ++ F
Sbjct: 417 SLFNFSESFFYGIRIKDEELVKE--KLDIENIIRQF 450
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 25/247 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCP-----IEMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C +M L W +N DR H MPIITPA+
Sbjct: 263 LVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWG--RNHADRFHLMPIITPAFPE 320
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ VS T++V+ ++ IC +I GK +W LFE F+ Y++++ +
Sbjct: 321 QNSTHNVSRSTMEVIKKEMADALVICN-----DIFDGKCDWKFLFEEVNFYSQYKHFVVM 375
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
+ A + ++ G++ESRFRQL E++ G+ H P K SK S +F G
Sbjct: 376 KLDAKKEETENSYGGFLESRFRQLIGAFERN-RGIKMAHLNPKKCQPTSK--AQSLWFIG 432
Query: 177 LSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFVFP 232
L +V + D + NF+ + N + ++ E ++ SY R L ++ P
Sbjct: 433 LEFDDV-----VKNMDLTREIDNFKWNL-NVQAKQIAGFEEVELDISYAKRSQLIKYMPP 486
Query: 233 DGYKWHR 239
K R
Sbjct: 487 AELKKGR 493
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 25/238 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C P +M L W +N DR H MPIITPA+
Sbjct: 263 LVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFHLMPIITPAFPE 320
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ VS T++V+ ++ IC ++ GK +W LFE F+ Y++++ +
Sbjct: 321 QNSTHNVSRSTMEVIKKEMTDALTICN-----DVFEGKCDWKHLFEEVNFYSQYKHFVVM 375
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
+ A + ++ G++ESR R L E++ G+ H P K SK S +F G
Sbjct: 376 KLDAKKEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQPTSK--SQSLWFIG 432
Query: 177 LSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFV 230
L EV + D + NF+ + N + ++ E ++ SYV R HL ++
Sbjct: 433 LEFDEV-----VKNMDLTREINNFKWNL-NVQAKQIAGFEDVELDISYVKRSHLIKYL 484
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L S FF +++ W WP PV + +W P D MPI+ P + +
Sbjct: 303 LFSMFFDIFSHWPWPLPVAL------HDQAPLWGP-----DGCSLMPIVMPCFPPEFCAS 351
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + E+ + G + + +I +W+ +F YP+ YE++L + + A
Sbjct: 352 SITKSTFNKIKEELRRGFALTK-----DIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAP 406
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
++L W GWV+SRFR L LK+E + C P P++ ++ + PN FFWGL +
Sbjct: 407 TTEELRDWVGWVKSRFRNLILKLESLD---VDCDPDPSEKVNHTIAAPNVVFFWGLIYRS 463
Query: 182 VGTSKECQQFDFQGTVKN 199
S + DF +V N
Sbjct: 464 TKISASSLKNDFMKSVIN 481
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ RFF + + W WP P+M+ IE G L VW+P+ P D+ H MPIITPAY M ++
Sbjct: 259 VVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPGDKRHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ T +V+ + ++I +I K W LF+ + FF + ++ YL +
Sbjct: 319 HNITHSTQKVIKRELLRASQITS-----DILSEKRRWRDLFDRHTFFTQDFKYYLSIVAA 373
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
+ D + W VES+ R+L IEQ P + ++ ++P F G R
Sbjct: 374 SHDKEAQDNWSSSVESKVRKLVGLIEQS----------PAEDVELAQP-----FNKGFKR 418
Query: 180 KEVGTSKECQQFDFQGTVK 198
++E ++ QG+VK
Sbjct: 419 VHHCKTEEEKEEVLQGSVK 437
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWD-PRKNPKDRSHRMPIITPAYHCMN 58
L+ FF Y QW+WP PV + I +L VW DR H MPII+P Y N
Sbjct: 154 LLYFFFFTYCQWKWPQPVELAEIVANSHDLNLPVWGYGATEMSDRRHLMPIISPCYPAQN 213
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI 118
++ VS TL++M E F +C+ +I GKA W LFE F Y N+LQ+
Sbjct: 214 TAALVSRSTLKIMKEMFIRAMGVCK-----QIHEGKAGWCDLFEPVDLFSTYANFLQIQA 268
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLL-QCHPYPNKYIDPSK 166
A D WKG+ + + +E+ + L + HP Y P K
Sbjct: 269 SARSKADHNMWKGFCAANIHNMISYLERCPDAYLDRAHPIQRSYAKPRK 317
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF + W+WP PV++ D + MPI P +
Sbjct: 248 LLANFFYTFAHWQWPTPVVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNS 296
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + +F G+ + + Y ++ W LFE YP+ Y + ++ + AA
Sbjct: 297 TITRSTFYKIVAEFLLGHNL--TKDYLKLNF---SWKDLFELYPYANTYTWFTKIHLSAA 351
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+ +DL W GWV+SRFR L +KIE+ G+ C P P +Y++ PN F+WGL +
Sbjct: 352 NQEDLSDWVGWVKSRFRCLLIKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT 408
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 227
+ S D + +F + +++ R I + V LP
Sbjct: 409 INVS------DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 448
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 91.3 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C P +M L W +N DR H MPIITPA+
Sbjct: 1068 LVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFHLMPIITPAFPE 1125
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ VS T++V+ ++ IC ++ GK +W LFE F+ Y++++ +
Sbjct: 1126 QNSTHNVSRSTMEVIKKEMADALIICN-----DVFEGKCDWKFLFEEVNFYSQYKHFVVM 1180
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
+ A + ++ G++ESR R L E++ G+ H P K SK S +F G
Sbjct: 1181 KLDAKKEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQPTSK--SQSLWFIG 1237
Query: 177 LSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFV 230
L EV + D + NF+ + N + ++ E ++ SYV R L ++
Sbjct: 1238 LEFDEV-----VKNMDLTREIDNFKWNL-NVQAKQIAGFEDVELDISYVKRSQLIKYL 1289
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF + W+WP PV++ D + MPI P +
Sbjct: 223 LLANFFYTFAHWQWPTPVVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNS 271
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + +F G+ + + Y ++ W LFE YP+ Y + ++ + AA
Sbjct: 272 TITRSTFYKIVAEFLLGHNL--TKDYLKLNF---SWKDLFELYPYANTYTWFTKIHLSAA 326
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+ +DL W GWV+SRFR L +KIE+ G+ C P P +Y++ PN F+WGL +
Sbjct: 327 NQEDLSDWVGWVKSRFRCLLIKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT 383
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 227
+ S D + +F + +++ R I + V LP
Sbjct: 384 INVS------DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 423
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF + W+WP PV++ D + MPI P +
Sbjct: 224 LLANFFYTFALWQWPTPVVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNS 272
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + +F G+ + + Y ++ W LFE YP+ Y + ++ + AA
Sbjct: 273 TITRSTFYKIVAEFLLGHNL--TKDYLKLNF---SWKDLFELYPYANTYTWFTKIHLSAA 327
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+ +DL W GWV+SRFR L +KIE+ G+ C P P +Y++ PN F+WGL +
Sbjct: 328 NQEDLSDWVGWVKSRFRCLLIKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT 384
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 227
+ S D + +F + +++ R I + V LP
Sbjct: 385 INVS------DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 424
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V +FF V+ +W+WP PV + + LGF VWD R N +DR H M IITPAY NS++
Sbjct: 227 VHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFH 286
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFE 102
VS T +VM +F +I + EI LGKA W LFE
Sbjct: 287 VSSSTRKVMLNEFNSDMQITD-----EIMLGKAGWDKLFE 321
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 25/238 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C P +M L W +N DR H MPIITPA+
Sbjct: 261 LVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWG--RNHADRFHLMPIITPAFPE 318
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ VS T++V+ ++ IC +I GK++W LFE F+ Y++++ +
Sbjct: 319 QNSTHNVSRSTMEVIKKEMADALVICN-----DIFEGKSDWKFLFEEVNFYSQYKHFVVM 373
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
+ A + ++ G++ESR R L E++ G+ H P K SK S +F G
Sbjct: 374 KLDAKKEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQPTSK--AQSIWFIG 430
Query: 177 LSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFV 230
L EV + D + NF+ + N + ++ E ++ SYV R L ++
Sbjct: 431 LEFDEV-----VKNMDLTREIDNFKWNL-NVQAKQIAGFEEVELDISYVKRSQLIKYL 482
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MPIITPAY M ++
Sbjct: 262 VIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITPAYPSMCAT 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ ++ + V+ + Q G CE+ + L K W LF + FF Y+ Y+ V
Sbjct: 322 FNITKSAMTVIQRELQRG---CEITD--NVMLSKRPWGDLFIKHTFFTSGYKYYISVVTT 376
Query: 120 AADADDLLTWKGWVESRFRQLTLK 143
+ + W G+VES+ ++ +L+
Sbjct: 377 STTKEAHKIWSGYVESKVQEGSLQ 400
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
Query: 14 RWPNPVMMCPIE--MGELGFS------VWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSL 65
+WP P+++ IE + EL FS VW+PR DR+H MPIITP+Y M S++ V+
Sbjct: 77 KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134
Query: 66 GTLQVMTEQFQCG-------------NRICEVRAYFEIELGKAEWSALFEHYPFFEAYEN 112
T+ VM ++F G N+ + +I +AEWS LF + FF+ Y
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRAEWSELFAKHDFFQKYRY 194
Query: 113 YLQVDIVAADADDLLTW----------------KGWVESRFRQLTLKIEQDTNGLLQCHP 156
YLQ+ + A+D L W G VESR RQL +K+E + L HP
Sbjct: 195 YLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLEF-VDQLEVAHP 253
Query: 157 Y 157
+
Sbjct: 254 F 254
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+L+S FF+ ++ W WP PV + E G L P ++ MPI P
Sbjct: 305 VLMSSFFKTFSGWPWPTPVAL---EDGRL------PTGGTRETRALMPIQLPCSPYGYCH 355
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
++ T +T + G+ + R ++ +W+ +FE + + + Y ++++ + +
Sbjct: 356 SNITKSTFYRITTELTLGHALT--RDLLRLDF---DWNDIFEPFCYSKKYSRFIKIYLSS 410
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
++ D+L W GWV+SRFR L K+E+ GL C P P ++IDP PN FFWG+
Sbjct: 411 SNQDELGDWVGWVKSRFRFLLAKVEE-VQGL--CDPNPTEFIDPDAGGPNVVFFWGVQPG 467
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSF 229
+ S D +F + I+N + + S + LP +
Sbjct: 468 RINFS------DIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 510
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 23/233 (9%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+L+S FF+ ++ W WP PV + E G L P ++ MPI P
Sbjct: 346 VLMSSFFKTFSGWPWPTPVAL---EDGRL------PTGGTRETRALMPIQLPCSPYGYCH 396
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
++ T +T + G+ + R ++ +W+ +FE + + + Y ++++ + +
Sbjct: 397 SNITKSTFYRITTELTLGHAL--TRDLLRLDF---DWNDIFEPFCYSKKYSRFIKIYLSS 451
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
++ D+L W GWV+SRFR L K+E+ GL C P P ++IDP PN FFWG+
Sbjct: 452 SNQDELGDWVGWVKSRFRFLLAKVEE-VQGL--CDPNPTEFIDPDAGEPNVVFFWGVQPG 508
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
+ S D +F + I+N + + S + LP + D
Sbjct: 509 RINFS------DIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAXLD 555
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C P +M L W +N DR H MPIITPA+
Sbjct: 262 LVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWG--RNHADRFHLMPIITPAFPE 319
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
NS++ VS T++V+ ++ IC FE GK +W LFE F+ Y++++ +
Sbjct: 320 QNSTHNVSRSTMEVIKKEMADALVICN--DVFE---GKCDWKHLFEELNFYSQYKHFVVL 374
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWG 176
+ A + ++ G++ESR R L E++ G+ H P K SK S +F G
Sbjct: 375 KLDAKKEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQPTSK--AQSLWFIG 431
Query: 177 LSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFV 230
L EV + D + NF+ + N + ++ E ++ SYV R L ++
Sbjct: 432 LEFDEV-----VKNMDLTREIDNFKWNL-NVQAKQIPGFEDVELDISYVKRSQLIKYL 483
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 105/240 (43%), Gaps = 21/240 (8%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML FF +QW WP P+ + GEL WDP D + MPIITPAY NS
Sbjct: 262 MLALYFFSEISQWTWPTPIYINRPNYGEL--LSWDPTTE-SDHNDVMPIITPAYPSTNSQ 318
Query: 61 YKVSLGT----LQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQV 116
+ + +Q M + Q I G WSA+ E + FFE+Y+NY+++
Sbjct: 319 RSATTSSRNRIIQEMVKALQIMPNIIT---------GDLPWSAVCEDHEFFESYKNYIEI 369
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP-YPNKYIDPSKPCPNSAFFW 175
DI A D WKG V S+ ++L +E ++C P +P+ + + + F
Sbjct: 370 DIRAEGLADYNWWKGTVISKVKRLITSLEAIER--VKCAPIFPSSFDRENNNKYQGSIFI 427
Query: 176 GLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVC-RRHLPSFVFPDG 234
GL E E ++ + +K + I R I V R+ +P F FP+G
Sbjct: 428 GL-ETEKTKDDEGKKVNPSAAIKKYLEEIYKLTNRPLSTKIENPQVINRKKIPDFCFPNG 486
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 35/185 (18%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ ++F +Y +W+WP PVM+ IE VWDP+ +P D+ H+MP+ITP+Y M S++
Sbjct: 429 IICKYFELYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTH 488
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
+ T++ E+ + +++ + AEW+ F FF+ Y ++L V I+
Sbjct: 489 NIMNSTMKRYKEELERAHKLL---------VEGAEWNEFFRGTDFFQRYRSFLAVFILLK 539
Query: 122 DA-----DDLLT--------------------WKGWVESRFRQLTLKIEQDTNGLLQCHP 156
+A +D + W+G V SR R L+ K+E L P
Sbjct: 540 NAGCTTNNDARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLET-VEQLDSAPP 598
Query: 157 YPNKY 161
+P +
Sbjct: 599 FPQTF 603
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 15 WPNPVMMCPIE------MGELGFSVWDPR------KNPKDRSHRMPIITPAYHCMNSSYK 62
WP+PV++ E M L VWDPR ++P R H MPI+TPA+ NS++
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 122
V+ +L+++ + + G + +I GKA WSALFE FF Y+++L + ++A
Sbjct: 97 VTKSSLKIIMNEIEEG-----LVTINDIMKGKAGWSALFEEVNFFSRYKHFLALLCLSAT 151
Query: 123 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 169
D L W G VES+ R L +E+ + CH + Y + P P
Sbjct: 152 EQDELVWCGLVESKIRFLIASLERR-ESIRVCHVHTKYYQPRNDPFP 197
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE-MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
M+V FF +++QW WP PV + E + L VWDPR NP D+ H MPI+TP+Y NS
Sbjct: 261 MIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYHLMPILTPSYPSQNS 320
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
+Y V ++ + + G + VRA + K WS LFE FF+ Y +Y+ V +V
Sbjct: 321 TYNVQRSNRIIIERELKQGLNV--VRASM---MHKRSWSNLFEAAFFFQ-YRHYVVVIVV 374
Query: 120 AADADDLLTWKGWVESRFRQLTLKIE 145
+ G VESR R L E
Sbjct: 375 GNVKHTFIELCGLVESRLRVLVSNFE 400
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 9/118 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ ++F +Y +W+WP PVM+ IE VWDP+ +P D+ H+MP+ITP+Y M S++
Sbjct: 418 MICKYFELYKEWKWPTPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTH 477
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
+ T++ E+ + G+R+ + GK EW F FF+ Y+++L V I+
Sbjct: 478 NIINSTMKRYKEELERGHRL--------LAEGK-EWKEFFRSTDFFQRYKSFLAVFIL 526
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 27/199 (13%)
Query: 42 DRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALF 101
DR H MPIITPAY NS+Y VS T VM E+F+ G + + EI GK++WS L
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLL 55
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP 158
E FF+ Y +Y+ + A+ ++ W G VES+ R L +E++ T + +P
Sbjct: 56 EPPNFFQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFP 115
Query: 159 --------NKYIDPSKPCPNSAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNY 207
N Y+ S +F G+ + V ++ +D Q R +N
Sbjct: 116 GNKEHHKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNI 167
Query: 208 RVRREGRDIYFSYVCRRHL 226
+ +EG I ++V ++ L
Sbjct: 168 NMLKEGMKIEATHVKKKQL 186
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 18 PVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQC 77
P+M M L VWDPR N DR H MPIITPA+ NS++ VS TL ++ E+ +
Sbjct: 144 PIMTL---MSTLNNLVWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKS 200
Query: 78 GNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRF 137
IC+ +I G A W+ LFE FF Y +++ + + + G+ ESR
Sbjct: 201 ALLICD-----QIHAGSATWNNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRI 249
Query: 138 RQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN-SAFFWGLSRKEVGTSKECQQFDFQGT 196
RQL +E++ L H P K+ K N S +F GL E + D
Sbjct: 250 RQLVQIMERNCQVKL-AHINPKKF----KSVQNASVWFLGLELIE-----NVKNLDLTAE 299
Query: 197 VKNFRRGID 205
++ F++ ++
Sbjct: 300 IEGFKKNVE 308
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 110/259 (42%), Gaps = 30/259 (11%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V RFF + +W WP PV + L WDP + D H MPI+TPA N++
Sbjct: 257 LIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLMPILTPAVPSTNTA 316
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIV 119
+ V T VM + + G +I +I W ALFE + FF AY++Y+ V
Sbjct: 317 HTVGPSTKMVMMRELERGEQIIA-----DIYSKSKPWKALFERHNFFTTAYKHYICVVTA 371
Query: 120 AADADDLLTWKGWVESRFRQLTLKIE-QDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
+ D W G V+S+ + L IE D N + P+ NK G
Sbjct: 372 SKSKDAQDAWAGLVQSKIKWLVQGIESSDANSIELVQPF-NK---------------GFE 415
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 238
R +E Q +G+++ +G V+ E D + L + DG + H
Sbjct: 416 RVHDCQGEEELQKTLEGSLEFQVKG-----VKTETTDQLTG--IKTQLVAQSDTDGVEPH 468
Query: 239 RPSRHFNEQSGKPCEDVKM 257
P+ ++Q G P + K+
Sbjct: 469 APNGDASKQEGTPGQSQKV 487
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 23/180 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSVWDPRKNP--------KDRSHRMPIITP 52
L+ +FF ++ +W WP P ++C P++ G GF VW R++ MPI+TP
Sbjct: 224 LLCKFFAIFAKWDWPAPAILCRPLDHG-YGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTP 282
Query: 53 AYHCMNSSYKVSLGTLQVMTEQFQCGNRICE--VRAYFEI--------ELGKAEWSALFE 102
AY MNS+ V+ + V+ ++F G +C+ V + E+ ++G W L E
Sbjct: 283 AYPAMNSAANVNPWSFAVLRDEFARGAEVCKRIVARHAELAENGAVDPDVGGPLWDELVE 342
Query: 103 HYPFFEAYENYLQVDIVA-ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
FF+ Y+ YL V+++ + +D +KG++ SR R+L K+ L H +P +Y
Sbjct: 343 KTDFFDKYDAYLAVNVLGDGEKEDFDNFKGFLSSRLRKLVEKMGHLP--LKMIHLFPKEY 400
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 37/290 (12%)
Query: 6 FFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSL 65
FF V ++W+WP P+M+ +LG W + +DR+H MPIITPAY MNSS +V+
Sbjct: 503 FFYVLSEWQWPKPIMLNIPYDAKLGLECWSFQL--RDRTHVMPIITPAYPQMNSSAQVTA 560
Query: 66 GTLQVMTEQFQCGNRICEVRAYFEI-----------ELGKAE---------WSALFEHYP 105
TL V+ E+ + E I E G E W L++
Sbjct: 561 STLSVIKEELWRARDLLEREILSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSS 620
Query: 106 FFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPS 165
FF Y+ Y+ + I D+ +L W+ +V SR +L +K+ QD + H YP ++ +
Sbjct: 621 FFVRYDWYVGLTI-QIDSSELGRWETFVCSRLHKL-VKMLQDLPMIDLVHGYPQFLVNKA 678
Query: 166 KPCPNSAFFWGLSRKE------VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFS 219
S+ F GL R+ + + F ++ + ++ R + + +
Sbjct: 679 ----GSSLFLGLKRRSEDDEEFLSSVNRTISFFIATDLQQNAQSSESPAKRMQTTAVLLN 734
Query: 220 YVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKR 269
+ LP FVF +G +R ++Q K M + +++ + +R
Sbjct: 735 W---DDLPDFVFENGNADALQNREHDDQHLKQLSLTCMGSTSNAQHKSRR 781
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 20/210 (9%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEMGELGFSVWDPRKNPKDRS-HRMPIITPAYHCMNS 59
++ RFF +Y++W+W + V + I+ + + P+++ M IITP + C+N
Sbjct: 267 IIERFFFLYSRWKWHDMAVQIEYIQEDIYNQMICGNQWVPENKGISNMMIITPCFPCINC 326
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKA--EWSALFEHYPFFEAYENYLQVD 117
+Y V+ TL+V+ EQFQ G RI + EI+ ++ ++ LF+ + FF+ Y +LQ+
Sbjct: 327 AYNVTESTLRVIQEQFQYGYRILD-----EIQKNQSHYDYQDLFKPFEFFKRYNAFLQIR 381
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPNKYID------PSKPCPN 170
I+A + ++ WKG VE R+LT IE + ++ HP+ +K+ID
Sbjct: 382 ILAKNKNEYFQWKGHVEINLRKLTKIIENGKLSKIILIHPF-SKFIDLCLKEQLGDYSLG 440
Query: 171 SAFFWGLSRKEVGTSKECQQFDFQGTVKNF 200
+F+G+ K+ ++ Q F+ +K F
Sbjct: 441 CVYFYGIKVKD---NQNDIQISFEEEIKKF 467
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+S FF Y W WP PVM+ + G S P ++ + MPI P
Sbjct: 236 LISNFFATYATWPWPTPVML------QDGMS--SPAEDFIETRSFMPIRLPCSPHEYCHS 287
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + +F G+ + + ++ +W+ +FE +P+ + Y ++++ + A
Sbjct: 288 NITKSTYYRIRTEFLRGHSLTK-----DLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAP 342
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLL-QCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
D D++ W GWV+SRFR L LK+E GL QC P P +Y D PN F+WGL+
Sbjct: 343 DQDEVGDWVGWVKSRFRALLLKLE----GLQGQCDPSPVEYADRDVSEPNVVFYWGLN-- 396
Query: 181 EVGTSKECQQFDFQGTVKNFRRGI-DNYRVRREGRDIYFSYVCRRHLP 227
D + ++F R I Y R R + S V LP
Sbjct: 397 ----PSRSNYIDLESVEEDFLRNIYSGYHGTR--RKLELSIVKAAELP 438
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 305 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 353
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGK----AEWSALFEHYPFFEAYENYLQVD 117
++ T + E+ Q G + ++ +E G W+ LF +P+ Y+++L++
Sbjct: 354 SITRSTFNKIKEELQRGFALTKL-GVCTVEQGDRNGDINWTELFAPFPYTVRYKHFLRIV 412
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL 177
+ A A++L W GWV+SRFR L LK+E + C P P++ D S PN FFWGL
Sbjct: 413 LSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGL 469
Query: 178 S-RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
R + + DF +V N G + + DI S V HLP V+
Sbjct: 470 MYRTSTNICIDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 520
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 309 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 357
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A
Sbjct: 358 SITRSTFNKIKEELQRGFALTKGDRN-----GDINWTELFAPFPYTVRYKHFLRIVLSAP 412
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RK 180
A++L W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 413 VAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYRT 469
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
+ + DF +V N G + + DI S V HLP V+
Sbjct: 470 STNICIDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 516
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 282 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 330
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A
Sbjct: 331 SITRSTFNKIKEELQRGFALTKGDRN-----GDINWTELFAPFPYTVRYKHFLRIVLSAP 385
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RK 180
A++L W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 386 VAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYRT 442
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
+ + DF +V N G + + DI S V HLP V+
Sbjct: 443 STNICIDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 489
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 27/194 (13%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPF 106
MPIITPAY NS+Y VS T VM E+F+ G + + EI GK++WS L E F
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNF 55
Query: 107 FEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP----- 158
F+ Y +Y+ + A+ ++ L W G VES+ R L +E++ T + +P
Sbjct: 56 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 115
Query: 159 ---NKYIDPSKPCPNSAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRRE 212
N Y+ S +F G+ + V ++ +D Q R +N + +E
Sbjct: 116 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 167
Query: 213 GRDIYFSYVCRRHL 226
G I ++V ++ L
Sbjct: 168 GMKIEATHVKKKQL 181
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 23 PIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRIC 82
PIE G L VW+P+ DR H MPIITPAY M +++ VSL T V+ + + G I
Sbjct: 248 PIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIV 307
Query: 83 EVRAYFEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADDLLTWKGWVESRFRQLT 141
+ +I LG+ W+ LF + FF + Y+ YL + + + W G VES+ R L
Sbjct: 308 D-----KIFLGQLTWNDLFTRHTFFSQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLV 362
Query: 142 LKIEQDTNGLLQCHPYPNKY 161
+++ ++ + HP+P +
Sbjct: 363 GALDRKSS-IEVAHPFPKGF 381
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 194 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 242
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A
Sbjct: 243 SITRSTFNKIKEELQRGFALTKGDRN-----GDINWTELFAPFPYTVRYKHFLRIVLSAP 297
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RK 180
A++L W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 298 VAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYRT 354
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
+ + DF +V N G + + DI S V HLP V+
Sbjct: 355 STNICIDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 401
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 194 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 242
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A
Sbjct: 243 SITRSTFNKIKEELQRGFALTKGDRN-----GDINWTELFAPFPYTVRYKHFLRIVLSAP 297
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RK 180
A++L W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 298 VAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYRT 354
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
+ + DF +V N G + + DI S V HLP V+
Sbjct: 355 STNICIDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 401
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWD-PRKNPKDRSHRMPIITPAYHCMNSS 60
L + FF +++ W WP PV S++D P MPI+ P +
Sbjct: 282 LFNSFFDIFSHWHWPLPV------------SLFDQPTPWRPHCCSFMPIVMPCSPPEFCA 329
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A
Sbjct: 330 SSITRSTFNKIKEELQRGFALTKGDRN-----GDINWTELFAPFPYTVRYKHFLRIVLSA 384
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-R 179
A++L W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 385 PVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYR 441
Query: 180 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
+ + DF +V N G + + DI S V HLP V+
Sbjct: 442 TSTNICIDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 489
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 35/258 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPII---TPAYHCMN 58
L + FF ++ W W PV + G+ P + + MPI+ TP CM+
Sbjct: 320 LFTMFFEIFAHWDWQIPVNL----HGQ-------PTNCKRSDGYYMPIVMPCTPPELCMS 368
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI 118
+ K T + + E+ G + + ++ EW+ LF +P+ Y+ +L++ +
Sbjct: 369 NMTKC---TFKKIREELMRGYALTK-----DLWRHDFEWTWLFAPFPYATRYQQFLRIAL 420
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
+ +++L W GWV+SRFRQL LK+E+ NG L+C PY ++ +D PN + WGL
Sbjct: 421 CSPTSEELRDWTGWVKSRFRQLILKLER--NG-LECDPYSSEEVDHRVIKPNIMYHWGL- 476
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDN---YRVRREGRDIYFSYVCRRHLPSFVFPD-G 234
S+ D ++F + I N +V+ ++ S V LP ++ D
Sbjct: 477 -----ISEANTYLDISSLREDFMKDIINDVYGKVKCRRSELTLSVVGSSQLPKSMYSDSA 531
Query: 235 YKWHRPSRHFNEQSGKPC 252
Y + P Q C
Sbjct: 532 YLGYMPQYMVGYQPAPDC 549
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF ++ W+WP PV++ D MPI P +
Sbjct: 250 LLANFFYIFAHWQWPTPVVLLE-----------DTYPATGAPPGLMPIQLPCGSHQYCNS 298
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T + +F G+ + + Y + W LFE YP+ Y + ++ + AA
Sbjct: 299 NITRSTFYKIMAEFLRGHNL--TKDYLKPNF---SWKNLFELYPYENTYTWFTKIHLSAA 353
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+ +DL W GWV+SRFR L KIE+ G+ C P P +Y++ PN F+WGL +
Sbjct: 354 NQEDLSDWVGWVKSRFRCLLSKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT 410
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 227
+ S D + F + +++ + I S V LP
Sbjct: 411 INVS------DIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLP 450
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 11/186 (5%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPF 106
MPIITPAY NS+Y VS+ T VM E+F+ G I + EI L KAEWS LFE F
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNF 55
Query: 107 FEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYID 163
F+ Y++Y+ + A L W G VES+ R L +E++ T + +P +
Sbjct: 56 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 115
Query: 164 PSKPCPNSAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSY 220
P K + + GL K+ S+ +D Q R N ++ I +
Sbjct: 116 PDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMH 175
Query: 221 VCRRHL 226
V R+ L
Sbjct: 176 VKRKQL 181
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
+ +FF V+ WRWPNPVM+ ELG VW+ + R P+ITPAY MNS+
Sbjct: 231 LRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQAANMR-QVAPMITPAYPAMNSTLS 289
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 122
VS TLQ++ E+F G+ I + + Y + + G+ ++ I
Sbjct: 290 VSRQTLQILHEEFCRGHGIVD-KLYKDYQRGRDRPGG---------------RLCITGPT 333
Query: 123 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY----------IDPSKPCPNSA 172
D W G+VESR R+L + + L + +P K+ + ++ +
Sbjct: 334 LHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDVCCADKTALLTHAQRANSIT 393
Query: 173 FFWGLSRKEVGTSKECQQFDFQGTVKNFRR-GIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
+F G ++ E Q D + + NFR+ + + G DI + LP+ F
Sbjct: 394 YFIGFRVDKLRMRGE--QLDIERQLSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICF 451
Query: 232 PDGYK 236
Y+
Sbjct: 452 DGTYE 456
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 13/187 (6%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
+ +FF V+++W WP PV++ + VW+P+ N ++ +MP+ITP Y + S++
Sbjct: 241 IEKFFEVFSKWAWPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTHN 300
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 122
++ TL VM +FQ G I + E K L E FF ++ Y + + +
Sbjct: 301 ITTSTLFVMKREFQRGTAIFAESLQNKTEPFKV-LDELCEDTDFFTRHKTYFMIAMACDN 359
Query: 123 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEV 182
+ + + G+ E+R R K+E N I+ + P + G+++KEV
Sbjct: 360 SKEFGRFMGFAETRVRMFAQKLESIEN------------IEYAYTLPKNYHLEGVTQKEV 407
Query: 183 GTSKECQ 189
K+ Q
Sbjct: 408 PLLKDLQ 414
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+S FF Y W WP PVM+ + G S ++ + MPI P
Sbjct: 224 LISNFFSTYAMWPWPTPVML------QDGMS--SNVEDVIETRFYMPIRLPCSPYEYCHS 275
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ T + +F G+ + R +++L ++ +FE +P+ Y ++++ + A
Sbjct: 276 NVTKSTFTKIRAEFLRGHSM--TRDLLKLKL-DSDVGRIFEPFPYSTNYTRFVKIYLSAP 332
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 179
D D+L W GWV+S FR L LK+E G C P P +Y+D PN F+WGL+R
Sbjct: 333 DQDELGDWVGWVKSHFRCLLLKLEA-VQGF--CDPNPMEYVDMDASEPNVVFYWGLNR 387
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
LV RFF + ++W W NPV +CPI E+G + F VW+P++ DRSH MP+ITPA+ M
Sbjct: 26 LVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITPAFPSM 85
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRI 81
NS+Y V+ T +++ + + +++
Sbjct: 86 NSTYNVTETTKRIIMGEIERAHKL 109
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRK--NPKDRSHRMPIITPAYHCMNS 59
L+S FF ++ W WP PV S+ DP D MPI+ P
Sbjct: 300 LLSLFFDIFVHWPWPLPV------------SLLDPPVLCGGPDGCSLMPIMLPCIPPEFC 347
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
S + T + E+ + G + + + ++WS LF +P+ Y+ +L++ +
Sbjct: 348 SSSTTESTFSKIKEELRRGYALSK-----DTRSTDSDWSWLFAPFPYGARYKCFLRIVLS 402
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS- 178
A D+L W GWV+SRFR L LK+E + C P P+K +D + PN FFWGL
Sbjct: 403 APMEDELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSKQVDHTITDPNVVFFWGLIY 459
Query: 179 RKEVGTSKECQQFDFQGTVKN 199
R+ + + DF +V N
Sbjct: 460 RRSIQICTNSLKEDFMKSVCN 480
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
LV FF + W WP+PV + I+ +L WDP++N +D MPI+TP + N++
Sbjct: 191 LVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNAQDGRDLMPILTPVFPNKNAA 250
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+ V T +++T++ I ++ G W LFE Y + + ++L + +
Sbjct: 251 FTVRQATRKIVTDELIRARDIVS-----DVLRGSGTWEKLFERYDLRDDHRHFLLLTLQT 305
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQD 147
++L+ G ++SR R L +E +
Sbjct: 306 TSKEELVVVGGLIDSRLRDLAQALEDE 332
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 40/253 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF+ + W W PV + EL + MPI+ P +
Sbjct: 318 LFAVFFQTFAHWPWQVPVSL----HDELTTCL-------HSEGRLMPIVMPCTPPEFCAS 366
Query: 62 KVSLGTLQVMTEQFQCGNRICE--VRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
V+ G+L+ + E+ G + +R F+ WS LFE +P+ + Y+ +L++ +
Sbjct: 367 TVTKGSLKKIREELTRGYVLTRDPLRHDFQ-------WSWLFEPFPYDQKYQQFLRIALR 419
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL-S 178
A +L W GWV+SRFR L LK+E+ ++C P P++ +D + PN F+WGL
Sbjct: 420 APTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHTDNDPNVVFYWGLIP 476
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP----SFVFP-- 232
++ + + DF + N G V+ D+ S V LP S V+P
Sbjct: 477 KRIIQVDTSSLKGDFMEDLTNDVYG----TVKCTHSDVTISVVGLPQLPKSMCSRVYPPA 532
Query: 233 ------DGYKWHR 239
DG + HR
Sbjct: 533 VHAALYDGLRGHR 545
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 18/238 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ FF W WP P+ + G S WDP + +D MPIITPAY +NS +
Sbjct: 254 IIVMFFNDLATWTWPEPIYINTPTTGNR--SNWDPTRQ-QDHKDCMPIITPAYPTINSLH 310
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
+ + MT +F+ G ++ E A W + + FF + +++V +VA
Sbjct: 311 SATKSSRNRMTVEFKRGFKVASACLKSE-----ASWERIIDSPKFFVRHRKFVEVLVVAT 365
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGL 177
+ + +V+SR R L + IE + + +P ++ P+ S F+ GL
Sbjct: 366 EEKVYTEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEF--PANGYRGNEFCSVFYIGL 423
Query: 178 SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRR-EGRDIYFSYVCRRHLPSFVFPDG 234
S + + D K + +D+ R + D+ V + LPSF+FP+G
Sbjct: 424 SYHVPKDENQSRTLDLTSPAKKW---VDDIRQKAPPNADVILDVVDTKDLPSFLFPNG 478
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 40/253 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF+ + W W PV + EL + MPI+ P +
Sbjct: 203 LFAVFFQTFAHWPWQVPVSL----HDELTTCL-------HSEGRLMPIVMPCTPLEFCAS 251
Query: 62 KVSLGTLQVMTEQFQCGNRICE--VRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
V+ G+L+ + E+ G + +R F+ WS LFE +P+ + Y+ +L++ +
Sbjct: 252 TVTKGSLKKIREELTRGYVLTRDPLRHDFQ-------WSWLFEPFPYDQKYQQFLRIALR 304
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL-S 178
A +L W GWV+SRFR L LK+E+ ++C P P++ +D + PN F+WGL
Sbjct: 305 APTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHTDNDPNVVFYWGLIP 361
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP----SFVFP-- 232
++ + + DF + N G V+ D+ S V LP S V+P
Sbjct: 362 KRIIQVDTSSLKGDFMEDLTNDVYG----TVKCTHSDVTISVVGLPQLPKSMCSRVYPPA 417
Query: 233 ------DGYKWHR 239
DG + HR
Sbjct: 418 VHAALYDGLRGHR 430
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 40/253 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF+ + W W PV + EL + MPI+ P +
Sbjct: 203 LFAVFFQTFAHWPWQVPVSL----HDELTTCL-------HSEGRLMPIVMPCTPPEFCAS 251
Query: 62 KVSLGTLQVMTEQFQCGNRICE--VRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
V+ G+L+ + E+ G + +R F+ WS LFE +P+ + Y+ +L++ +
Sbjct: 252 TVTKGSLKKIREELTRGYVLTRDPLRHDFQ-------WSWLFEPFPYDQKYQQFLRIALR 304
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL-S 178
A +L W GWV+SRFR L LK+E+ ++C P P++ +D + PN F+WGL
Sbjct: 305 APTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHTDNDPNVVFYWGLIP 361
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP----SFVFP-- 232
++ + + DF + N G V+ D+ S V LP S V+P
Sbjct: 362 KRIIQVDTSSLKGDFMEDLTNDVYG----TVKCTHSDVTISVVGLPQLPKSMCSRVYPPA 417
Query: 233 ------DGYKWHR 239
DG + HR
Sbjct: 418 VHAALYDGLRGHR 430
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 40/253 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF+ + W W PV + EL + MPI+ P +
Sbjct: 38 LFAVFFQTFAHWPWQVPVSL----HDELTTCL-------HSEGRLMPIVMPCTPPEFCAS 86
Query: 62 KVSLGTLQVMTEQFQCGNRICE--VRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
V+ G+L+ + E+ G + +R F+ WS LFE +P+ + Y+ +L++ +
Sbjct: 87 TVTKGSLKKIREELTRGYVLTRDPLRHDFQ-------WSWLFEPFPYDQKYQQFLRIALR 139
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL-S 178
A +L W GWV+SRFR L LK+E+ ++C P P++ +D + PN F+WGL
Sbjct: 140 APTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHTDNDPNVVFYWGLIP 196
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP----SFVFP-- 232
++ + + DF + N G V+ D+ S V LP S V+P
Sbjct: 197 KRIIQVDTSSLKGDFMEDLTNDVYG----TVKCTHSDVTISVVGLPQLPKSMCSRVYPPA 252
Query: 233 ------DGYKWHR 239
DG + HR
Sbjct: 253 VHAALYDGLRGHR 265
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
+ +FF V+++W WP PV++ + VW+P+ NP+ ++ +MP+ITP Y + S++
Sbjct: 241 IEKFFDVFSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHN 300
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 122
++ TL V ++F G I A + + L E FF ++ Y + + +
Sbjct: 301 ITNSTLFVAKKEFLRGVAIFSENA--DKKDPMKILDQLCEDADFFTRHKTYFMIALACDN 358
Query: 123 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI 162
+ + G+ E+R R K+E N + + +P KYI
Sbjct: 359 PKEFSRFMGFAETRVRMFAQKLENIEN-IEYAYTFPKKYI 397
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 26/191 (13%)
Query: 2 LVSRFFRVYTQWRWPN-PV----MMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ RFF +Y++WRW + PV ++ + +L W P + M IITP + C
Sbjct: 268 LLERFFFLYSRWRWQDFPVQVEYIVDDVANSKLSADQWRP-----EYKSSMMIITPCFPC 322
Query: 57 MNSSYKVSLGTLQVMTEQFQCG-NRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
MN ++ VS TL+++ EQ G IC+++ G +S LF+ + FF+ Y+++L+
Sbjct: 323 MNCAHNVSSTTLRIIQEQLWHGYETICKIQN------GSKNYSDLFKSFKFFKKYKHFLE 376
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPN---KYIDPSKPCPNS 171
+ I+A + +D WKG VES R+LT E LL+ HPYP+ ++D ++ N
Sbjct: 377 IKILATNKNDYTVWKGHVESGLRKLTRLFESPQYMNLLEVHPYPSYIENFLDDTQSQKNK 436
Query: 172 -----AFFWGL 177
+++GL
Sbjct: 437 YKFQCKYYYGL 447
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 21/211 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF VY +W+W + G S R+ DR H MP+ITP + N++Y
Sbjct: 277 IVERFFFVYARWQW--------TATRDYGNSNVPLRRYTSDRHHVMPVITPIFPTHNTTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEV----RAYFEIELGKAEWSALFEHYPFFEAYENYLQVD 117
V +V+ + + G I E+ ++ + + W+ L +PFF+ Y +L ++
Sbjct: 329 NVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLLE 388
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY---------IDPSKPC 168
I A L +KG VESR R L +E + P+P + I P
Sbjct: 389 ISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHPVMFPRGPLGADAIPGEAPT 448
Query: 169 PNSAFFWGLSRKEVGTSKECQQFDFQGTVKN 199
AF G++ + T + +K
Sbjct: 449 FLGAFVLGITFDHIATDDLAASAEVSKEIKT 479
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 104/251 (41%), Gaps = 27/251 (10%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGEL-----GFSV---WDPRKNPKDRSHRMPIITPAY 54
V FF + W+WP PV + + + G +V W+P + +D H PI+TPAY
Sbjct: 399 VQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAVLPSWNPAIHIRDGLHVCPILTPAY 458
Query: 55 HCMNSSYKVSLGTLQVMTEQFQ-CGNRICE--VRAYFEIELG-----KAEWSALFE-HYP 105
MNSSY V+L L+ MTE Q ++I R++ G K W L+ +
Sbjct: 459 PVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSHTTYNRGVPVRRKIPWHRLWSLNAG 518
Query: 106 FFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTN-----GLLQCHPYPNK 160
+ +++Y+ I A + +TW VESR R L +E + G P
Sbjct: 519 WVFRHQHYVHATIRAPQGEAFVTWFRLVESRLRVLISSLETPDSHAWPHGRFFYRNVPIA 578
Query: 161 YIDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSY 220
D + FF GL + D + +F R ++ + R D+ +
Sbjct: 579 PYDELNGLREAHFFIGLR-----FASHVDTADVRTLTLDFLRQVNGWIGRDSSMDLSLGH 633
Query: 221 VCRRHLPSFVF 231
V +LP FV
Sbjct: 634 VTLPNLPRFVL 644
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 30/256 (11%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGEL-------GFSVWDPRKNPKDRSHRMPIITPA 53
+L+ +FF +Y W++ + +++ P E + WDP + R + +ITP
Sbjct: 273 LLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTRRHFSR-RPLTVITPT 331
Query: 54 YHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENY 113
Y NS++ V+ L V+ + N + + A G++ ++ LFE FF+ Y +
Sbjct: 332 YPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQ-----GESSYNDLFEPAMFFKQYGTF 386
Query: 114 LQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCH-------PYPNKYI---D 163
+Q++++ ++ + + G+VES+ R+L K+ GL H P P +++ D
Sbjct: 387 VQIEVLGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLGGGD 445
Query: 164 PSK-PCPNSAFFWGLSRKEVGT---SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFS 219
P P N F+ GL + Q DF VK F GI + I
Sbjct: 446 PEDGPWQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEFLLGI--HITDPTQTSISIK 503
Query: 220 YVCRRHLPSFVFPDGY 235
V RR LP +V + Y
Sbjct: 504 VVKRRALPEWVKKEYY 519
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC--PIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
L+S FF ++ W WP PV + P+ P + P D MPI+ P
Sbjct: 300 LLSLFFDIFVHWPWPLPVSLLDPPV-----------PCRGP-DGCSLMPIMLPCIPPEFC 347
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
S + T + E+ G + + + WS LF +P+ Y+ +L++ +
Sbjct: 348 SSSTTESTFSKIKEELWRGYALSK-----DTRSTDFNWSWLFAPFPYGARYKCFLRIVLS 402
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS- 178
A ++L W GWV+SRFR L LK+E + C P P++ +D + PN FFWGL
Sbjct: 403 APMGEELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSEQVDHTITDPNVVFFWGLIY 459
Query: 179 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
R+ + + DF +V N G + + DI S V LP VF
Sbjct: 460 RRNIQICISSLKEDFMKSVCNNIYG----KEKCAHSDITMSIVGPPQLPKSVF 508
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 24/159 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V+RFFR Y W PNP M +G WDPR++ D
Sbjct: 255 MVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR----GWDPRESKSDAMALF 310
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ Y V+L L+ + ++FQ G+ + KA+ WS +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVL 370
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
E PFF +++YLQ+ + +DA+ + VESR R L
Sbjct: 371 EPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 24/159 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V+RFFR Y W PNP M +G WDPR++ D
Sbjct: 255 MVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR----GWDPRESKSDAMALF 310
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ Y V+L L+ + ++FQ G+ + KA+ WS +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVL 370
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
E PFF +++YLQ+ + +DA+ + VESR R L
Sbjct: 371 EPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 24/159 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+++RFFR Y W PNP M +G WDPR++ D
Sbjct: 255 MITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR----GWDPRESKSDAMALF 310
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ Y V+L L+ + ++FQ G+ + KA+ WS +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVL 370
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
E PFF +++YLQ+ + +DA+ + VESR R L
Sbjct: 371 EPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF VY +W+W + G S R+ DR H MP+ITP + N++Y
Sbjct: 277 IVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSDRHHVMPVITPIFPTHNTTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEV----RAYFEIELGKAEWSALFEHYPFFEAYENYLQVD 117
V +V+ + + G I E+ ++ + + W+ L +PFF+ Y +L ++
Sbjct: 329 NVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLLE 388
Query: 118 IVAADADDLLTWKGWVESRFRQLTLKIE 145
I A L +KG VESR R L +E
Sbjct: 389 ISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWD-PRKNPKDRSHRMPIITPAYHCMN 58
L+ FF Y+QW+WP PV + + +L VW DR H MPIITP Y N
Sbjct: 224 LLYFFFFTYSQWKWPQPVGLTEVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQN 283
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHY-PFFEA 109
++ VS TL+VM E+F IC+ +I G AEWS LFE PF +A
Sbjct: 284 ATANVSKSTLKVMQEEFTRAKDICK-----QILEGNAEWSDLFEPLDPFSKA 330
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 24/183 (13%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 MVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGR----GWDPRESKSDALALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ Y V++ L+ + ++F G+ IC +E K + WS +
Sbjct: 308 PVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKIL 367
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
E FF Y+ YL V + DA+ + VES+ R L + L+ P+
Sbjct: 368 EPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQSLESFPHVRLR 427
Query: 162 IDP 164
++P
Sbjct: 428 LNP 430
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 24/183 (13%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 MVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGR----GWDPRESKSDALALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ Y V++ L+ + ++F G+ IC +E K + WS +
Sbjct: 308 PVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKIL 367
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
E FF Y+ YL V + DA+ + VES+ R L + L+ P+
Sbjct: 368 EPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQSLESFPHVRLR 427
Query: 162 IDP 164
++P
Sbjct: 428 LNP 430
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 23/144 (15%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V + F V+++W+ LGF +WDPR N + + H M IITPAY NS++
Sbjct: 416 VHKCFLVFSRWKLRQ----------NLGFQLWDPRVNVQGQFHLMSIITPAYPQQNSTFH 465
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 122
VS T +VM +F G +I + EI L KA W L + + + +
Sbjct: 466 VSRSTRKVMLNEFNRGMQITD-----EIMLDKAGWDKLIATLSY--------STLVTSNN 512
Query: 123 ADDLLTWKGWVESRFRQLTLKIEQ 146
DD L W G VES+ R L +E+
Sbjct: 513 TDDHLEWCGLVESKIRYLIQNLER 536
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 33/37 (89%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
MLVSRFFRVYTQWRWPNPVM+C IE +LGF VWDPR
Sbjct: 251 MLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE-MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
LV +FF Y +W W PV + +E +G W P N D S M I+TP Y N+S
Sbjct: 249 LVEKFFWHYKRWDWAIPVELQHVEDLGITHIPHWSPINNYHDMS-VMKILTPVYPSQNAS 307
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y V+ TL + + + + +I GKA W L++ PFF Y +Y+ V +
Sbjct: 308 YTVTRSTLYRIKRELDRAESVVQ-----KIADGKATWPRLWKQIPFFGVYSHYICVQALT 362
Query: 121 ADADDLLTWKGWVESRFRQLTLKIE 145
D ++G VES R L +E
Sbjct: 363 NSEQDRTLYEGLVESTVRNLVTSLE 387
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 74.3 bits (181), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FF +Y+ W+WPNPV++ +WDP+ + DR H+MPIITPAY + S++
Sbjct: 739 ILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMHKMPIITPAYPSICSTH 798
Query: 62 KVSLGTLQVMTEQFQ 76
V+ TL V+ E+ +
Sbjct: 799 NVTNTTLGVINEELK 813
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 100 LFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNG-----LLQC 154
LF+ FF+ Y+ YL + + D WKG++ES+ R L K+E ++ G +++
Sbjct: 896 LFQQSDFFKKYKFYLNIKLTNDD-----KWKGFIESKIRLLCAKLE-NSEGFSIGYMIKA 949
Query: 155 HPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGR 214
P+P ++ FF GL K+ + + V +F R ++++ + EG
Sbjct: 950 VPFPQSFVYND----FVHFFVGLDYKDR------IKINIDKPVNDFLRILNDWDKKDEGS 999
Query: 215 DIYFSYVCRRHLPSFV 230
+I ++ + F+
Sbjct: 1000 EISIKINKKKEIGEFL 1015
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 5 RFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
RFF+V ++W+WP PVM+ I LGF +WDPR++ DRSH MPIITPAY MN
Sbjct: 656 RFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMN 709
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 37/46 (80%)
Query: 143 KIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKEC 188
+IE+DTNG+LQCHPYPN+YID SK CP+ AFF GL RKE T+ C
Sbjct: 5 QIERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGVTADGC 50
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 96 EWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCH 155
+WS LFE +P+ + Y+ +L++ + A +L W GWV+SRFR L LK+E+ ++C
Sbjct: 333 QWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECD 389
Query: 156 PYPNKYIDPSKPCPNSAFFWGL-SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGR 214
P P++ +D + PN F+WGL ++ + + DF + N G V+
Sbjct: 390 PCPSEEVDHTDNDPNVVFYWGLIPKRIIQVDTSSLKGDFMEDLTNDVYG----TVKCTHS 445
Query: 215 DIYFSYVCRRHLP----SFVFP--------DGYKWHR 239
D+ S V LP S V+P DG + HR
Sbjct: 446 DVTISVVGLPQLPKSMCSRVYPPAVHAALYDGLRGHR 482
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++++FF V +QWRWP PVM+ P G + +W + P D MPIITP Y NSS+
Sbjct: 267 ILNKFFLVMSQWRWPEPVMLLPEGYG-VSSQLWSITQMPWD---IMPIITPVYPQQNSSF 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENY--LQVDIV 119
VS TL VM G RI + +I + + +W + F + YE+Y LQ
Sbjct: 323 NVSKSTLLVMKNALTEGVRITD-----DILMERCDWKSFFHPVHIADMYEHYVVLQTFRY 377
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPS 165
D + W VE ++ NG+ C KY+ S
Sbjct: 378 TTDPHEKELWIMSVERSMKKF-------LNGIDACARCAIKYLHVS 416
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 36/241 (14%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHR----MPIITPAYHCM 57
L + FF ++ W W PV D P + H MPI+ P
Sbjct: 305 LFTMFFGIFAHWPWHIPV---------------DLHGQPTNCRHSDGCLMPIVMPCTPPE 349
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKA--EWSALFEHYPFFEAYENYLQ 115
+ ++ GT + + E+ G + + +LG EW+ +FE +P+ Y +L+
Sbjct: 350 LCASNMTEGTFRKIREELMRGYVLTK-------DLGSHDFEWAWIFEPFPYSTTYGQFLR 402
Query: 116 VDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFW 175
+ + A +++L W GWV+SRF L LK+E N ++C P ++ +D + PN+ + W
Sbjct: 403 IALCAPTSEELHDWIGWVKSRFPYLILKLE---NIGIECDPNSSQEVDHTVIKPNTVYHW 459
Query: 176 GL-SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 234
GL +V + DF + N G +V+ ++ S V LP + D
Sbjct: 460 GLIPLSDVYLDPSSLKEDFMKYIINDVYG----KVKCTDSELTISIVDASELPKSMSNDS 515
Query: 235 Y 235
+
Sbjct: 516 F 516
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR---KNPKDRSHRMPIITPAYHCMN 58
L+S FF ++ W WP PV S+ DP + P D MPI+ P
Sbjct: 354 LLSLFFDIFAHWPWPLPV------------SLLDPPVLCRGP-DGCSLMPIMLPCNPPEF 400
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI 118
S + T + E+ + G + + + +WS LF +P+ Y+ +L++ +
Sbjct: 401 CSSSTTESTFSKIKEELRRGYALTK-----DTRSTDFDWSWLFASFPYGARYKCFLRIVL 455
Query: 119 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
A ++L W GWV+SRFR L LK+E + C P ++ +D + PN FFWGL
Sbjct: 456 SAPLDEELRDWVGWVKSRFRNLLLKLESLG---VYCDPDSSEQVDHTITEPNVVFFWGLV 512
Query: 179 -RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
+ + + DF +V N G + + DI + V LP +F
Sbjct: 513 FTRNIQICTSSLKEDFMKSVCNNIYG----KEKCAHSDITMAIVGPPQLPKSIF 562
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR----GWDPRESKSDAMALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ + V+L L+ + +F G+ IC E K+ WS L
Sbjct: 308 PVLTPAVPYGNACFNVTLTNLRQLCAEFARGHEICSSSLVASAEEAKSRFGPHGIWSRLL 367
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
E FF Y+ YL V + DA+ + VES+ R L
Sbjct: 368 EPVKFFGNYKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+++RFFR Y W PNP M +G WDPR++ D
Sbjct: 255 MITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR----GWDPRESKSDAMALF 310
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCG-----NRICEVRAYFEIELGK-AEWSALF 101
P++TPA N+ Y V+L L+ + ++FQ G N + E + G WS +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSNDLGMSAVEAEAKFGPFGVWSRVL 370
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
E PFF + +YL + + +DA+ + VESR R L
Sbjct: 371 EPAPFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 96 EWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCH 155
+W+ LFE +P+ + Y+ +L++ + A +L W GWV+SRFR L LK+E+ ++C
Sbjct: 301 QWTWLFEPFPYDKKYQQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLERAG---IECD 357
Query: 156 PYPNKYIDPSKPCPNSAFFWGL-SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGR 214
P P++ +D + PN F+WGL + + + DF ++ N G V+
Sbjct: 358 PCPSEEVDHTDNDPNVVFYWGLIPERIIQVDTSSLKEDFMESITNDVYGT----VKCTHS 413
Query: 215 DIYFSYVCRRHLP 227
D+ S V LP
Sbjct: 414 DVTISVVGLPQLP 426
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR----GWDPRESKSDAMALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ + V+L L+ + +F G+ IC E K+ WS L
Sbjct: 308 PVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLL 367
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
E FF ++ YL V + DA+ + VESR R L
Sbjct: 368 EPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESRIRFL 406
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 13 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR----GWDPRESKSDAMALF 68
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ + V+L L+ + +F G+ IC E K+ WS L
Sbjct: 69 PVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLL 128
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
E FF ++ YL V + DA+ + VES+ R L
Sbjct: 129 EPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 167
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 MVVRFFRIYHAWFSPNPQGSGKENRAIYLTETMRVKTNLGR----CWDPRESKSDALALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ + V++ L+ + +F G+ IC + K + WS +
Sbjct: 308 PVLTPAVPYGNACFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNETKEKFGPHGLWSKIL 367
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
E FF Y+ Y+ V + +DA+ + VES+ R L + ++ P+ +
Sbjct: 368 EPVKFFGEYKYYMHVQVTCSDAELYQGYVEAVESKIRFLWAGTAESRAQSIESFPHIQLH 427
Query: 162 IDPSK 166
++P +
Sbjct: 428 LNPRR 432
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGEL-------GFSVWDPRKNPKDRSHRMPIITPA 53
+L+ +FF +Y W++ + +++ P E + WDP ++ R + +ITP
Sbjct: 273 LLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHHFSR-RPLTVITPT 331
Query: 54 YHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENY 113
Y NS++ ++ L V+ + N + + A G++ ++ LFE FF+ Y +
Sbjct: 332 YPMANSTFNITDSALNVIRNEISRANSLTQGLAQ-----GESSYNDLFEPAMFFKQYGTF 386
Query: 114 LQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCH-------PYPNKYI---D 163
+Q++++ ++ + + G+VES+ R+L K+ GL H P P +++ D
Sbjct: 387 VQIEVLGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLGGGD 445
Query: 164 PSK-PCPNSAFFWGL 177
P P N F+ GL
Sbjct: 446 PEDGPWQNIFFYLGL 460
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 69/242 (28%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGEL---------GFSVWDPRKNPKDRSHRMPIITP 52
++ +FF VY W+W +PV I +G+ V D MPI+TP
Sbjct: 291 IIYKFFEVYADWKWFDPVF---IRVGKKKDKTKLDLNKLQVLDAYS-----QDIMPILTP 342
Query: 53 AYHCMNSSYKV-----------------------------------SLGTLQVMTE---- 73
+ NS+Y+V +L L + E
Sbjct: 343 NTNPKNSAYRVCSHTFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKL 402
Query: 74 -----QFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLT 128
Q Q N+ +V++ + + K W LF+ + FF+ YE++L++DI++ D L
Sbjct: 403 TVDALQIQESNQESQVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLK 462
Query: 129 WKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-DPSKPCPNSAF------FWGLSRKE 181
W G+VES+ R+L +++ QD + YP + + ++ N+AF F G+ E
Sbjct: 463 WLGYVESQLRRL-MQLLQDIEQISGLRIYPRSFNREETQDTINNAFKCCDSYFIGIKFNE 521
Query: 182 VG 183
G
Sbjct: 522 AG 523
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF VY W W PV + P R P +S +MPI+TP NS+
Sbjct: 963 LLAEFFEVYNHWDWQQPVAITP----------GSARYKPGHKSDKMPIVTPTPPFNNSAR 1012
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ TL M ++F I + + +A + L + FF+ Y YL V++ +
Sbjct: 1013 NVARSTLTEMQQEFFRAFDITQASQWN----SEAGLNDLLQPTNFFKDYHYYLMVEVHSL 1068
Query: 122 DADDLLTWK-------GWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
+D++ W GW+ESR L +E+ N P+P +++
Sbjct: 1069 SSDEVTKWPTNFSLSLGWLESRLIALIFDLEK--NPQTYARPFPGTFVN 1115
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR----GWDPRESKSDAMALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE------WSALF 101
P++TPA N+ + V+L L+ + +F G+ IC E K+ WS L
Sbjct: 308 PVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLL 367
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
E FF ++ YL V + DA+ + VES+ R L
Sbjct: 368 EPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 37/58 (63%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
LV +FF V +W WPNPV++ E L VWDPR NP DR H MPIITPAY NS
Sbjct: 26 LVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNS 83
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
VS FF++Y+QW W PV++ E + + + D K M IITPAY N+++K
Sbjct: 281 VSLFFQIYSQWNWKVPVVIDESEQEIICYYLQDEDKR---NDKIMQIITPAYPFFNTTFK 337
Query: 63 VSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 122
V T Q + ++FQ G + +LG +W+ + + FF+ ++ ++ + IV+
Sbjct: 338 VHKITFQTIFQEFQIGAQ----------KLG--DWNEVLRPFDFFDCFQYFVALSIVSKT 385
Query: 123 ADDLLTWKGWVESRFRQL 140
+++ W G+ E++ +L
Sbjct: 386 SENFHKWTGFCEAQLPKL 403
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDP----RKNPKDRSHRMPIITPAYHCMN 58
VS FF++Y+QW W PV++ E + + R K M IITPAY N
Sbjct: 257 VSLFFQIYSQWNWKIPVVIDESEQDFIQIETFKTLCWKRDEDKRNDKIMQIITPAYPFFN 316
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDI 118
+++KV+ T Q + ++FQ G + +LG +W+ + FF+ ++ ++ + I
Sbjct: 317 TTFKVNKITFQTIFQEFQIGAQ----------KLG--DWNEVLRPLDFFDCFQYFVAISI 364
Query: 119 VAADADDLLTWKGWVESRFRQL 140
V+ +++ W G+ E++ +L
Sbjct: 365 VSKSSENFHKWTGFCEAQLPKL 386
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF VY W W PV + P R P +S +MPI+TP NS+
Sbjct: 740 LLAEFFEVYNHWDWQQPVAITP----------GSARYKPGHKSDKMPIVTPTPPFNNSAR 789
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
V+ TL M ++F I + + +A + L + FF+ Y YL V++ +
Sbjct: 790 NVARSTLTEMQQEFFRAFDITQAPQWNS----EAGLNDLLQPTNFFKDYHYYLMVEVHSL 845
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
+D++ GW+ESR L +E+ N P+P +++
Sbjct: 846 SSDEVTKCLGWLESRLIALIFDLEK--NPQTYARPFPGTFVN 885
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V+ WRWP P+++ G VW + + P+ITPAY MNS+
Sbjct: 229 LLRKFFLVFKTWRWPQPLLLTKPHDAGYGLPVWSVATAVRQVA---PMITPAYPAMNSTL 285
Query: 62 KVSLGTLQVMTEQFQCGNRICEV--RAYFEIELGKAEWSALFEHYPFFEAY 110
VS TLQ++ E+F G+ + + + Y + + W+ LFE FF Y
Sbjct: 286 AVSRQTLQILQEEFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 28/233 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF ++ W W PV + G+ P + MPI+ P +
Sbjct: 221 LFTIFFDIFAHWNWQIPVSL----HGQ-------PTNCRRPDGSFMPILLPCTPPEFCTS 269
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ GT + + E+ G + + E EW LF +P+ YE +L++ + A
Sbjct: 270 NMTKGTFKKIREELMRGYALTK-----EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAP 324
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+++L W GWV+SRFR L LK+E ++C P + +D + P+ WGL
Sbjct: 325 TSEELRDWAGWVKSRFRNLILKLESIG---VECDPDSTEEVDHTVFEPSIVCHWGL---- 377
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDN---YRVRREGRDIYFSYVCRRHLPSFVF 231
K D ++F + + N +V+ + S V LP ++
Sbjct: 378 --IYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRSSQLPKSLY 428
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++ +FF Y+ W+WP V++ P FS P + K++ M I TPAY NS+
Sbjct: 388 IIEQFFLQYSSWKWPTMEVLLGP-------FS--QPEERQKNQKFEMSIYTPAYPEYNST 438
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
+V L+++ + + NRI + EI+ G+A W L + F Y ++++D++
Sbjct: 439 ERVKKINLEIIDYKIKEANRIIQE----EIKTGQAPWDRLIQEEDFLNKYTKFIEIDLIR 494
Query: 121 ADADDLL----TWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN-SAFFW 175
+ D+ + T + + + L Q L+ P+P Y + P SAF
Sbjct: 495 IERDETMREFKTQQDKLSVKLLTLFEFFSQKKPQELEIRPWPFFYKKKDQKYPQCSAFLI 554
Query: 176 GLSRKEVGTSKECQQFDFQGTVKNF----RRGID 205
G+ K S +++ F+ ++ F R+ +D
Sbjct: 555 GIKAK----SHIQEEYSFKNCIQEFAMQQRKSLD 584
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE-MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLV FF++++QW WP PV + E + L VWDPR N D+ H MPI+TP+Y NS
Sbjct: 1133 MLVYLFFKIFSQWPWPKPVRLRESEYIPSLCLPVWDPRLNLMDQYHLMPILTPSYPSQNS 1192
Query: 60 SYKV 63
+Y V
Sbjct: 1193 AYNV 1196
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 MVVRFFRIYHSWFSPNPHESGKENRAIYLTETMRVKTSLGR----CWDPRESKSDALALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEI-----ELGK-AEWSALF 101
P++TPA N+ Y V++ L+ + +F G+ IC + + GK W+ +
Sbjct: 308 PVLTPAVPYGNACYNVTITNLRQLCSEFARGHEICSSCIGMSVNDTRTKFGKYGLWNKIL 367
Query: 102 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 140
E F Y YL + I D + + VES+ R L
Sbjct: 368 EPVKVFGEYRYYLHIQITCTDPEAYQGYVDAVESKIRFL 406
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + ++W WP PV++ P+E G + P D++HRMPIITP + M +++
Sbjct: 248 IVSRFFHIMSKWEWPQPVLLKPMEEGPI---------YPADKAHRMPIITPGFPSMCATH 298
Query: 62 KVSLGTLQVMTEQF 75
V+ T +M +F
Sbjct: 299 NVTNSTRSIMMNEF 312
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 17/188 (9%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPF 106
MPI+ P + ++ GT + + E+ G + + E EW LF +P+
Sbjct: 93 MPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK-----EPWRHDFEWVWLFAPFPY 147
Query: 107 FEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSK 166
YE +L++ + A +++L W GWV+SRFR L LK+E ++C P + +D +
Sbjct: 148 ATKYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLESIG---VECDPDSTEEVDHTV 204
Query: 167 PCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDN---YRVRREGRDIYFSYVCR 223
P+ WGL K D ++F + + N +V+ + S V
Sbjct: 205 FEPSIVCHWGL------IYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRS 258
Query: 224 RHLPSFVF 231
LP ++
Sbjct: 259 SQLPKSLY 266
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 33/51 (64%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITP 52
LV +FF V+++W WPNPV++ E L VW PR P DR H MPIITP
Sbjct: 117 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 37/207 (17%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGEL----GF---SVW--DPRKNPKDR-----SHRM 47
LV RFFRVY++W W + E GF VW P++ D+ + M
Sbjct: 257 LVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTTDQPLPLAASPM 316
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE-WSALFEHYPF 106
+ITPAY MNS++ V+ T+ + ++ + G I + ++L E W L E F
Sbjct: 317 AVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKG---VDLRSRECWETLLEPIHF 373
Query: 107 FE----AYENYLQVDIVAADADDLLTWKGWVESRFRQLTLK-----IEQDTNGLLQCHPY 157
F+ Y+ +LQ++I A + +G V S+ + L L+ +DTN PY
Sbjct: 374 FDYDQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLLLRKMPEVAPEDTNK----APY 429
Query: 158 -----PNKYIDPSKPCPN-SAFFWGLS 178
DP K P SA F GLS
Sbjct: 430 RAWTGAVALEDPYKEYPYCSALFVGLS 456
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+S FF + W WP PV + P R P+ + +P+I PA N++
Sbjct: 808 LLSHFFGTFAAWPWPQPVTLTP----------ETARYRPEGKRDLLPVIAPALPARNTAR 857
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS T +V+ E+ R E+ A + W+ALF+ E L++ + A
Sbjct: 858 NVSRSTYRVIREELL---RARELVARARSSRAPSSWAALFQPLSAHETSPAALRLSVDAP 914
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD 147
A+D GW+ L ++E D
Sbjct: 915 TAEDREVVAGWILGHVTALVYRLEGD 940
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPF 106
MPIITPAY NS+Y VS+ T VM E+F+ G I + EI L KAEWS LFE F
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITD-----EILLSKAEWSKLFEAPNF 55
Query: 107 FEAYE 111
F+ Y+
Sbjct: 56 FQKYK 60
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 29/233 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF ++ W W PV + G+ P + MPI+ P +
Sbjct: 221 LFTIFFDIFAHWNWQIPVSL----HGQ-------PTNCRRPDGSFMPILLPCTPPEFCTS 269
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ GT + + E+ G + + E EW LF +P+ YE +L++ + A
Sbjct: 270 NMTKGTFKKIREELMRGYALTK-----EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAP 324
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+++L W GWV+SRF L LK+E ++C P + +D + P+ WGL
Sbjct: 325 TSEELRDWAGWVKSRF-NLILKLESIG---VECDPDSTEEVDHTVFEPSIVCHWGL---- 376
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDN---YRVRREGRDIYFSYVCRRHLPSFVF 231
K D ++F + + N +V+ + S V LP ++
Sbjct: 377 --IYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRSSQLPKSLY 427
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 26/205 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF ++ W W PV + G+ P + MPI+ P +
Sbjct: 239 LFTIFFDIFAHWNWQIPVSL----HGQ-------PTNCRRPDGSFMPILLPCTPPEFCTS 287
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ GT + + E+ G + + E EW LF +P+ YE +L++ + A
Sbjct: 288 NMTKGTFKKIREELMRGYALTK-----EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAP 342
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+++L W GWV+SRF L LK+E ++C P + +D + P+ WGL
Sbjct: 343 TSEELRDWAGWVKSRF-NLILKLESIG---VECDPDSTEEVDHTVFEPSIVCHWGL---- 394
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDN 206
K D ++F + + N
Sbjct: 395 --IYKTSTHIDISSLGEDFMKDVIN 417
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 62/236 (26%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ + F V++ W+WP+PV++ + C++S
Sbjct: 110 IIQKVFFVFSTWKWPSPVVL------------------------------KQFGCVDSKL 139
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
TL ++ E+ + IC+ +I+ G A W+ LFE FF Y++++ + I
Sbjct: 140 ANLKSTLHIIQEEMKSALEICD-----QIQKGNATWNDLFEEINFFSRYKHFVALTI--- 191
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN-SAFFWGLSRK 180
+ D T G+ ES+ RQL IE+++ + H P K K N S +F GL
Sbjct: 192 NED---TNIGFFESKIRQLVQIIERNSQ-VKTAHINPRKL----KNIRNESTWFLGLEFT 243
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIY------FSYVCRRHLPSFV 230
E + D ++ F+R + R++ + I +YV R L F+
Sbjct: 244 E-----NAKNLDLTSEIEGFKRNM----ARQQSKGIVGQIQLDATYVKRSDLIKFI 290
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 27/171 (15%)
Query: 70 VMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTW 129
VM E+F+ G + + EI GK++WS L E FF+ Y +Y+ + A+ ++ L W
Sbjct: 3 VMVEEFKQGLAVTD-----EILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEW 57
Query: 130 KGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFWGLS 178
G VES+ R L +E++ T + +P N Y+ S +F G+
Sbjct: 58 VGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFLGII 109
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
+ V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 110 FRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 160
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHR-MPIITPAYHCMNS 59
+L++ FF++ +Q W P+ + E G ++ P +S P+IT C NS
Sbjct: 832 ILLAHFFQILSQHDWTQPIAL--TEGG---------KQYPVRKSREWFPVITSIEPCQNS 880
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
+ V+ T +++ + G I E E+ G W+ LFE E +L + +
Sbjct: 881 TRNVTRSTAEILRRELGRGAEIAE-----EVLAGNTAWTTLFESADLPEQSNAFLVLTVS 935
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 158
+A+ +L GW+E L + +EQ N + P P
Sbjct: 936 SAEVGELEKCGGWLEGNTIGLAINLEQKLN--IHVRPRP 972
>gi|194696942|gb|ACF82555.1| unknown [Zea mays]
Length = 131
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 123 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKE 181
++L W GWV+SRFR L LK+E + C P P++ +D + PN FFWGL R+
Sbjct: 2 GEELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSEQVDHTITDPNVVFFWGLIYRRN 58
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 231
+ + DF +V N G + + DI S V LP VF
Sbjct: 59 IQICISSLKEDFMKSVCNNIYG----KEKCAHSDITMSIVGPPQLPKSVF 104
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 90/238 (37%), Gaps = 67/238 (28%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR + ITP ++ +
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS----------ITPVFYLL---- 311
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
+ HY A A+
Sbjct: 312 --------------------------------------MVLHYIVLTAS---------AS 324
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
++ L W G VES+ R L +E++ T + +P + ++ S +F G+
Sbjct: 325 TEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGII 384
Query: 179 RKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 233
K+V ++ +D Q R +N + +EG I ++V ++ L ++ P+
Sbjct: 385 FKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHQYLPPE 442
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 22/177 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ FF ++ W WP PV + P R P+ + +MP++ PA N++
Sbjct: 822 LLDYFFEMFAAWPWPLPVTLTP----------GTARYVPEGKRDQMPVVAPALPPRNTAR 871
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS TL+V+ E+ R E E W ALF + V + A
Sbjct: 872 NVSRSTLRVLREELA---RASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAK 928
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 178
+D GW+ L ++E D L+ P+P PS+ P F GLS
Sbjct: 929 AHEDRQVAAGWILGHLTALVYRLEGDRRLFLR--PFP-----PSQ--PEGPFRIGLS 976
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPF 106
MPI+ P + ++ GT + + E+ G + + E EW LF +P+
Sbjct: 280 MPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK-----EPWRHDFEWVWLFAPFPY 334
Query: 107 FEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSK 166
YE +L++ + A +++L W GWV+SRF L LK+E ++C P + +D +
Sbjct: 335 ATKYEEFLRIALCAPTSEELRDWAGWVKSRF-NLILKLESIG---VECDPDSTEEVDHTV 390
Query: 167 PCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDN 206
P+ WGL K D ++F + + N
Sbjct: 391 FEPSIVCHWGL------IYKTSTHIDISSLGEDFMKDVIN 424
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 20/166 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ FF ++ W WP PV + P R P+ + +MP++ PA N++
Sbjct: 878 LLDYFFEMFAAWPWPLPVTLTP----------GTARYVPEGKRDQMPVVAPALPPRNTAR 927
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
VS TL+V+ E+ R E E W ALF + V + A
Sbjct: 928 NVSRSTLRVLREELA---RASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAK 984
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKP 167
+D GW+ L ++E D L+ P+P PS+P
Sbjct: 985 AHEDRQVAAGWILGHLTALVYRLEGDRRLFLR--PFP-----PSQP 1023
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 39 NPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQ----CGNRICEVRAYFEIELGK 94
NP DR H MPIITPAY NS+Y VS T VM E+F+ N I ++ +IE
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQVYRQANNINMLKEGMKIEATH 275
Query: 95 AEWSALFEHYP 105
+ L ++ P
Sbjct: 276 VKKKQLHQYLP 286
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 119/280 (42%), Gaps = 35/280 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF+VY+ W W + P+ +G + N K + + I+TPA N+++
Sbjct: 233 LLEKFFQVYSSWDW----LRAPVMLGT------NDDFNDKKKEGVIQILTPASPSENAAF 282
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ +L+++ + + G I F E G +W+ LF+ F Y +++ + ++
Sbjct: 283 SITKFSLELIKRELKRGQEIVH---EFSSE-GVNDWAKLFKPRHLFCGYYIFIEFIVTSS 338
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 181
+ L T G ES L +K + +++ + PN ++D N +F+ +
Sbjct: 339 SLEGLTTTIGKFESGLVNL-MKGLSEIEEIVEANVIPNGFLDEE----NEKYFYYVG--- 390
Query: 182 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYF--SYVCRRHLPSFVFPDGYKWHR 239
+ ++C D + +F + G+D+ S R +P+ K
Sbjct: 391 MNVKRDC-PVDISTPLNSF------LSIVNSGKDLIVDASIKKRSEIPTKFAHSVKKSIN 443
Query: 240 PSRHFNEQSGK----PCEDVKMCQSCSSERQLKRKKEHEI 275
S+ E S + E + S E+QLK K+E+ I
Sbjct: 444 KSQEVKETSSQVPSSVTETFDIPTKPSIEQQLKAKEENSI 483
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK-DRSHRMPIITPAYHCMNS- 59
LV+ FF Y Q+ W N E+ + V+ +K P+ +RS R P++ +H NS
Sbjct: 761 LVTSFFHHYGQFDWTN----------EMVYDVFFHKKRPRYNRSAREPMVVLGFHAPNSN 810
Query: 60 -SYKVSLGTLQVMTEQFQ-CGNRICEVRAYFEIELG-----KAEWSALFEHYPFFEAYEN 112
++ ++ LQ + ++F+ G R+CE ++ G + S F E Y N
Sbjct: 811 IAHTSTVPGLQTLVKEFKAAGERLCEQGMTWDAFFGLGPTLSSVSSPSLGAAGFLETYHN 870
Query: 113 YLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKP 167
+++VDI L+ GWVESR L ++I + T + +P ++ +
Sbjct: 871 FVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK-TLPNSEVRIWPGRFTNNETS 926
Query: 168 CPNSA------FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNY 207
+ + + GLS+ TS + D Q + + ID +
Sbjct: 927 AADESRDYHGCYLIGLSKATNFTSVDAPD-DKQAAKQALEKVIDRF 971
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 96/269 (35%), Gaps = 87/269 (32%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF +Y QW MP+ITPAY M S++
Sbjct: 229 IVSKFFPIYYQW---------------------------------MPVITPAYPSMCSTH 255
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T+ ++ + +R G + W LF FF Y Y+QV A+
Sbjct: 256 NITQSTMTIIKNEM--------LRDKIVNNPGSS-WVELFTPVDFFSLYRTYVQVVASAS 306
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC----PNSAFFWGL 177
A DL W R L +E N LL HP N I + C + G
Sbjct: 307 SAQDLKDW-------LRTLVQDLEMTDNVLL-AHPQVNG-ISKTYICLTEEEQAQASQGE 357
Query: 178 SRKEVGTSKECQQFDFQGT---VKNFRRGIDNYRVRREGR-----DIY-----FSYVC-- 222
E KE D + T KNF G+D + ++G+ ++Y F + C
Sbjct: 358 LPPEAMMRKEEDYADKEHTKVYTKNFFIGLDIEKKPKDGQQPRQLNLYYASKRFCFACQS 417
Query: 223 -----------------RRHLPSFVFPDG 234
R LP+F FPDG
Sbjct: 418 WDKYNEQDMSVILRPCKRSELPAFCFPDG 446
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 27/159 (16%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK-DRSHRMPIITPAYHCMNS- 59
LV+ FF Y Q+ W N ++ + V+ +K P+ +RS R P++ +H NS
Sbjct: 840 LVASFFHHYGQFDWTN----------DMVYDVFFHKKRPRYNRSTREPMVVLGFHTPNSN 889
Query: 60 -SYKVSLGTLQVMTEQFQCGN-RICEVRAYFEIELGKAEW-----SALFEHYPFFEAYEN 112
++ ++ LQ++ ++F+ + R+CE ++ G S F E Y+N
Sbjct: 890 IAHTSTMPGLQILVKEFKAADKRLCEPGMTWDAFFGPGSTLSPVSSPSLGAAGFLETYQN 949
Query: 113 YLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIEQ 146
+++VDI L+ GWVESR L ++I +
Sbjct: 950 FVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK 985
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 6 FFRVYTQWRWPNPVMMCP-IEMGELGFSVWDPRKNPKDRSHR--MPIITPAYHCMNSSYK 62
FF + M P + ELGF + P + S+ + ++TP Y MN++
Sbjct: 129 FFHFVADHLGSEIIAMTPQLSFPELGFDEENWSDKPSNFSNHDSLVLLTPTYPRMNTART 188
Query: 63 VSLGTLQVMTEQFQCGNRICE-VRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
+S +LQ + Q R+ E +++Y + G++ + E Y FFE + Y +V + A+
Sbjct: 189 ISRSSLQFIRSQ---ARRVYEKIKSYVD---GESTLLQMVEPYQFFEGFPIYFEVLVSAS 242
Query: 122 DADDLLTWKGWVESRFRQ----LTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA-FFWG 176
+ W G VES+ R L+L+IE + +P P SK N+A F+ G
Sbjct: 243 ANSEFKDWLGLVESKIRYLVFFLSLRIEN-----VALNPNP----IVSKSNSNAACFYIG 293
Query: 177 LS 178
L+
Sbjct: 294 LT 295
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF+VY+ W W + P+ +G + N K + + I+TPA N+++
Sbjct: 233 LLEKFFQVYSSWDW----LRTPVMLGT------NDDFNDKKKEGVIQILTPASPSENAAF 282
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ +L+++ + + G I F E G +W+ LF+ F Y +++ + ++
Sbjct: 283 SITKFSLEMIKRELKRGQEIVH---EFSSE-GVNDWAKLFKPRHLFCGYYIFIEFIVTSS 338
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
+ L T G ES L +K + +++ + PN ++D
Sbjct: 339 SLEGLTTTIGKFESGLVNL-MKGLSEIEEIIEANVIPNGFLD 379
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 15/144 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF Q+ W P+ + + G+ +SV PR +PIIT C N++
Sbjct: 884 LLANFFNHLNQYNWRQPIALT--DAGK-QYSVQVPRD-------LLPIITSIEPCQNTAR 933
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T ++++ +F + + EI G +WS+LFE + + +L + ++
Sbjct: 934 NITRSTAEILSGEFARATEMTQ-----EIAAGNLDWSSLFEPINLQQESDIFLNLKLIGN 988
Query: 122 DADDLLTWKGWVESRFRQLTLKIE 145
D L G++E L +++E
Sbjct: 989 DKQQLEKECGYLEGYIISLIIQLE 1012
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 161
+IV A A W GWVESR RQL+ ++E DT+G+L CH +P Y
Sbjct: 164 EIVKAGA----MWVGWVESRLRQLSARVEADTSGVLLCHLHPQAY 204
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF+VY+ W W + P+ +G + N K + + I+TPA N+++
Sbjct: 233 LLEKFFQVYSSWDW----LRTPVMLGT------NDDFNDKKKEGIIQILTPASPSENAAF 282
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ +L+++ + + G I F E G +W+ LF+ F Y +++ + ++
Sbjct: 283 SITKFSLEMIKRELKRGQEIVH---EFSSE-GVNDWAKLFKPRHLFCGYYIFIEFIVTSS 338
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 163
+ L T G ES L +K + +++ + PN ++D
Sbjct: 339 SLEGLTTTIGKFESGLVNL-MKGLSEIEEIIEANVIPNGFLD 379
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 33/176 (18%)
Query: 42 DRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALF 101
D + P++ PA +N+++ V LQ+ ++ ++C L +SAL+
Sbjct: 286 DAADLFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCS--------LVPMPYSALW 337
Query: 102 EHYPFFEAYENYLQVDI------VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCH 155
E Y + + ++ V I +AA D + WKG+VES+ R +E + +
Sbjct: 338 EPYNVLDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVR 393
Query: 156 PYPNKYID-PSKP---------CPNSAFFWGL--SRKEVGTS---KECQQFDFQGT 196
P+P +D P + C + AFF+G+ K+V S ++F+F T
Sbjct: 394 PFPCPVVDEPPRAVTRRGVTVHCRSRAFFFGVRNGNKDVAHSDVESAFREFEFAVT 449
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 34/214 (15%)
Query: 1 MLVSRFFRVYTQWR----WPNPVMMCPI--EMGEL-GF-SVWDPRKNPKDRSHRMPIITP 52
+L+ FF YTQW +PV + G + G W P KN R P+I+P
Sbjct: 105 VLLRFFFLFYTQWMSRHDHISPVYLTATLESRGRIPGLPESWKPAKNECFRD-LFPVISP 163
Query: 53 AYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYEN 112
AY +N + V L+ + + R+ +E L+ Y E + +
Sbjct: 164 AYPYVNDASNVGRCGLESLYSEITQAQRVISASDTLSLE-------KLWRPYCIMEDFAH 216
Query: 113 YLQVDIVA-----ADADDLLT-WKGWVESRFRQLTLKIEQDTNGLLQCHPYPNK------ 160
+L V++ + ADA+ +L W +V S+ R L +E+ + P+P+K
Sbjct: 217 FLLVEVSSLGDDMADAERILGRWGSYVGSKLRFLIYSVER----FVHARPHPHKLRAKMD 272
Query: 161 --YIDPSKPCPNSAFFWGLSRKEVGTSKECQQFD 192
++D C + F G+ K G+S FD
Sbjct: 273 GTFVDRKVCCSSIYFLIGVRSKNSGSSLRRCMFD 306
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI----EMGELGFSVWDPR 37
LV RFF + ++W W NPV +CPI E+G + F VW+P+
Sbjct: 266 LVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 30/234 (12%)
Query: 1 MLVSRFFRVYTQWRW----PNPVMMCPIEMGELGFSVWDPRKNPK-----DRSHRMPIIT 51
+++ FF +Y W +PV + P E E V P P D + P++
Sbjct: 155 VILRFFFSLYVWWLLRDTRMDPVSIVPKE--EDAAIVRVPGMPPPWDAVWDAADLFPVLN 212
Query: 52 PAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYE 111
PA +N+++ V LQ+ ++ ++C EL K ++ L EH FF
Sbjct: 213 PAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVPLSYSELWK-PYNILDEHR-FFVGVH 270
Query: 112 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPS------ 165
+ +AA D + WKG+VES+ R L +E + + P+P +D S
Sbjct: 271 ISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----CVAEVRPFPRPVVDESPREVTR 326
Query: 166 ----KPCPNSAFFWGL--SRKEVGTSKECQQF-DFQGTVKNFRRGIDNYRVRRE 212
C + AFF+G+ K+V S F +F+ +V G + + RE
Sbjct: 327 SGVTMHCRSRAFFFGVRNGNKDVARSDVEAAFSEFEFSVTEGTTGKNPFEWDRE 380
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 90/225 (40%), Gaps = 45/225 (20%)
Query: 6 FFRVYTQWRWPN----PVMMCPIEMGELGFSV------WDPRKNPKDRSHRMPIITPAYH 55
FF +Y W + PV + P + V WD + D P++ PA
Sbjct: 243 FFSLYVWWLLRDTRIAPVSIVPTDENAAIARVPGMPPPWDAVWDAADL---FPVLNPARP 299
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
+N+++ V LQ+ ++ ++C L +SAL+E Y + + ++
Sbjct: 300 TVNAAHAVGRSGLQLFLKELLRAEQLCA--------LVPMSYSALWEPYNILDEHRFFVG 351
Query: 116 VDI------VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID-PSKP- 167
V I +AA D + WKG+VES+ R +E + + P+ +D P +
Sbjct: 352 VHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVRPFSRPVVDEPPRVV 407
Query: 168 --------CPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGI 204
C + AFF+G+ +K+ + D + + F +
Sbjct: 408 TRRGVKVHCRSRAFFFGVRNG----NKDVEHSDVEAAFREFEFAV 448
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 22/133 (16%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGEL----GF---SVW--DPRKNPKDR-----SHRM 47
LV RFFRVY++W W + E GF VW P++ D+ + M
Sbjct: 145 LVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTTDQPLPLAASPM 204
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE-WSALFEHYPF 106
+ITPAY MNS++ V+ ++ + ++ + G I + ++L E W L E F
Sbjct: 205 AVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKG---VDLRSRECWETLLEPIHF 261
Query: 107 FE----AYENYLQ 115
F+ Y+ +LQ
Sbjct: 262 FDYDQGGYKQFLQ 274
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 8/48 (16%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEM--GELGFSVWDPRKNPKDRSHR 46
ML+ RFFRV+ +W+WP+PVM+C IE GELG +++P R HR
Sbjct: 40 MLLPRFFRVFARWKWPSPVMLCAIEHDDGELGL-----KRHPA-RHHR 81
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 41/198 (20%)
Query: 6 FFRVYTQWRWPN----PVMMCPIEMGELGFSV------WDPRKNPKDRSHRMPIITPAYH 55
FF +Y W + PV + P++ V WD + D P++ PA
Sbjct: 243 FFSLYVWWLLRDTRIAPVSIVPMDENAAIARVPGMPPPWDAVWDAADL---FPVLNPARP 299
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQ 115
+N+++ V LQ+ ++ ++C L +SAL+ Y + + ++
Sbjct: 300 TVNAAHAVGRSGLQLFLKELLRAEQLCA--------LVPMSYSALWAPYNILDEHRFFVG 351
Query: 116 VDI------VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID-PSKP- 167
V I +AA + + WKG+VES+ R +E + + P+P +D P +
Sbjct: 352 VHISSEHQSLAACEEAINAWKGYVESKLRMFVYALE----CVAEVRPFPRPVVDEPPRAV 407
Query: 168 --------CPNSAFFWGL 177
C + AFF+G+
Sbjct: 408 TRRGVTVHCRSRAFFFGV 425
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 189 QQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQS 248
+QFD + TV FR + Y + + G +I S++ RR +PSFVFP G + R ++ + +
Sbjct: 2 EQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTK-MSGTA 60
Query: 249 GKP 251
G+P
Sbjct: 61 GRP 63
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 20/162 (12%)
Query: 34 WDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELG 93
WDPR++ R +P+I PAY +N + V +L+V + R+ + E L
Sbjct: 277 WDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLL---SNLETPL- 331
Query: 94 KAEWSALFEHYPFFEAYENYLQVDIVAADADD------LLTWKGWVESRFRQLTLKIEQD 147
A++E Y + Y + V + + ++ L W +V S+ R L +E+
Sbjct: 332 ----EAIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER- 386
Query: 148 TNGLLQCHPYPNKYID-PSKPCPNSAFFWGLSRKEVGTSKEC 188
++ PYP K D P + P S F S VG ++
Sbjct: 387 ---IVDARPYPQKLNDGPPRSAPKSGRFLKGSCFIVGIKEKV 425
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 26/171 (15%)
Query: 70 VMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTW 129
V E+F+ G I + EI L KA+WS FE FF+ ++Y+ + A L W
Sbjct: 2 VAVEEFKQGLAITD-----EILLSKAKWSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEW 56
Query: 130 KGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFW--GLSRKEVGTSKE 187
G VES+ R L +E+ N++I + P W GL K+ S+
Sbjct: 57 VGLVESKIRILVGSLEK------------NEFITLAHVNPEFRTIWVIGLVFKKTENSEN 104
Query: 188 CQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFVF 231
+D Q + R N ++ +V R+ LPS+V
Sbjct: 105 LNVDLTYDIQSFMDTVYRQAINSKMFELDMKTAAMHVKRKQLHQLLPSYVL 155
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 42/225 (18%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYH--CMNS 59
+V FF Y+++ W N ++ P EL + +R+ R P+ +H +N+
Sbjct: 825 IVVTFFHYYSEFDWKNSMVFDPFFHKELRY----------NRTFREPLCLIGWHAPALNT 874
Query: 60 SYKVSLGTLQVMTEQFQCGNRI-----CEVRAYFEIE----LGKAEWSALFEHYPFFEAY 110
+ S+ T+ ++ +F R+ C IE LG + A E F A+
Sbjct: 875 APIASIPTVATISSEFGRAKRMLSDDDCIWGKLLGIEPETALGSVQAPAATE---FLHAF 931
Query: 111 ENYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 168
+ Y+++D + + GW+ESR L + I + LL +P++++D S
Sbjct: 932 KTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINRKLKHLL-ARIWPSRFLDVSAGA 990
Query: 169 PNSA------FFWGLS---------RKEVGTSKECQQFDFQGTVK 198
S + GL+ KEVG + + DF+ ++
Sbjct: 991 ETSGAEYHGCYLIGLAWDDDSNKEDAKEVGMAMQTVLQDFEARIR 1035
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK 41
+VSRFF + QW WP PV++ IE G L VW+P+ K
Sbjct: 250 IVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPKVRVK 289
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
LV +FF V+++W WPNPV++ E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 34 WDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELG 93
WDPR++ R +P+I PAY +N + VS L+V + +R+ +
Sbjct: 77 WDPRRD-ACRDDLLPVINPAYPYVNDARNVSRCGLEVFYAELTYAHRL--------LSNS 127
Query: 94 KAEWSALFEHYPFFEAYENYLQVDIVAADADD------LLTWKGWVESRFRQLTLKIEQD 147
+ +++ + + Y + V++ + + L W +V S+ R L +E+
Sbjct: 128 ETPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLSKLRILLYALER- 186
Query: 148 TNGLLQCHPYPNKYID-PSKPCPNSAFFWGLSRKEVGTSKE 187
++ PYP K D P + P S F S VG ++
Sbjct: 187 ---IVDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREK 224
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
LV +FF V+++W WPNPV++ E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
LV +FF V+++W WPNPV++ E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
LV +FF V+++W WPNPV++ E L VWDPR
Sbjct: 254 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 2 LVSRFFRVYTQWRWP-NPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+ +FF Y W W NPVM+ V D R K + + +ITPA NS
Sbjct: 233 LLEKFFHAYATWDWARNPVML----------GVSDDRPERK-KEEMVQVITPAAPRENSM 281
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
Y ++ +L+++ + G RI V+ Y G +W+ LF+ F Y +++ V
Sbjct: 282 YNMTRSSLELLKREMLRGERI--VKGYK--SEGGNDWNLLFKKRHCFCGYYIFVEFS-VR 336
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
+ L G ES+ + +E+ +++ + P Y++ ++ G++ K
Sbjct: 337 GSLESLENKIGMFESKIVRFVRSLEE-MEEVIEVNVIPEGYLEVENAV--DYYYVGMNVK 393
Query: 181 E 181
+
Sbjct: 394 K 394
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 34 WDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELG 93
WDPR++ R +P+I PAY +N + V +L+V + R+ + E L
Sbjct: 77 WDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLL---SNLETPL- 131
Query: 94 KAEWSALFEHYPFFEAYENYLQVDIVAADADD------LLTWKGWVESRFRQLTLKIEQD 147
++E Y + Y + V + + ++ L W +V S+ R L +E+
Sbjct: 132 ----ETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER- 186
Query: 148 TNGLLQCHPYPNKYID-PSKPCPNSAFFWGLSRKEVGTSKE 187
L+ PYP K D P + P S F S VG ++
Sbjct: 187 ---LVDARPYPQKLNDGPPRSVPKSGRFLKGSCFIVGIKEK 224
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 9/133 (6%)
Query: 97 WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP 156
W+ L +PFF+ Y +L ++I A L +KG VESR R L +E + P
Sbjct: 20 WADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQP 79
Query: 157 YPNKY---------IDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNY 207
+P + I P AF G++ + T + +K G +
Sbjct: 80 HPVMFPRGPLGADAIPGEAPTFLGAFVLGITFDHIATDDLAASAEVSKEIKTACDGFAEH 139
Query: 208 RVRREGRDIYFSY 220
+ D + S+
Sbjct: 140 ITQAALSDEWDSF 152
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
M++SRFF +++QW W PVM+ G G + D + MPI++P + N +
Sbjct: 240 MILSRFFSMWSQWPWQMPVMLTDYIPGINGTKIEYNSLAEFDNA-VMPIVSPCHPVCNVA 298
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAY-FEIELGKAEWSALFEHYPFFEAYENYLQVDIV 119
V+ T ++M +F+ G + A+ F I LF + + Y++++ +
Sbjct: 299 PYVTKSTRRIMQIEFERGWTLLNKNAHPFAI------IDKLFNPVNYTQRYKHFINIVTS 352
Query: 120 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP 156
+ TW + ++ + IE D N +LQ P
Sbjct: 353 STTITSHDTWVRKMATQIPRYLELIESDPN-ILQAQP 388
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 42.7 bits (99), Expect = 0.23, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF++ +Q W I + ELG K P+D +PII+ C N++
Sbjct: 818 LLANFFQILSQHNWRQT-----IALTELGKQ--HQVKLPQDL---LPIISSIEPCKNTAR 867
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 121
++ T +++ ++F R E+ I +GK W++L+E L ++I+
Sbjct: 868 NITRSTAKILRDEFA---RAAEIST--NILVGKDAWTSLYEPIDLTIGTNALLSIEILDT 922
Query: 122 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSK 166
D +ES LT+++EQ L PN I S+
Sbjct: 923 DEQCRQKCSDLLESTIIGLTIQLEQ-----LDVFVRPNPQISTSE 962
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 42.7 bits (99), Expect = 0.23, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 23/151 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF+ + W WP PV + G P + MP+I PA N++
Sbjct: 813 LLAHFFQTFASWPWPQPVALTQETAG----------YRPDGKRDLMPVIAPAEPLRNTAR 862
Query: 62 KVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAE-----WSALFEHYPFFEAYENYLQV 116
VS T + + E+ VRA + +A W LF+ L++
Sbjct: 863 NVSRSTFRTVREEL--------VRARELVTGARASSSPHAWEPLFQPVDAPRDLPARLRL 914
Query: 117 DIVAADADDLLTWKGWVESRFRQLTLKIEQD 147
+ A + GWV L ++E D
Sbjct: 915 SVEAPTPEAHEAAMGWVLGHLTALVYRLEGD 945
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 20/228 (8%)
Query: 70 VMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTW 129
VM E+ + G I + EI L KAEWS LFE FF+ Y++Y+ + A L
Sbjct: 2 VMVEELKQGLAITD-----EILLSKAEWSKLFEAPNFFQKYKHYIVLLASAHTEKQRLEC 56
Query: 130 KGWVESRFRQLTLKIEQDT-NGLLQCHP--YPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 186
VES+ L +E++ L +P +P +P K + + GL K+ S+
Sbjct: 57 VDLVESKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPDKEEFRTMWVIGLVFKKTENSE 116
Query: 187 ECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRH 243
+D Q N ++ I +V R+ L + PS
Sbjct: 117 NLSVDLTYDIQSFTDTVYSQAINSKMFELDMKIAAMHVKRKQLHQLL---------PSHM 167
Query: 244 FNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 291
++ E VK+ S L ++ + P ++K + ++S
Sbjct: 168 LQKRKKHSTEGVKLTALNDSTLDLSMDSDNSMSVPSPTSAMKTSPLNS 215
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus ND90Pr]
Length = 1226
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 40/206 (19%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK-DRSHRMPIITPAYHCMNSS 60
+V FF+ Y + W N ++ + + +K P+ +RS R P++ ++H NS+
Sbjct: 840 IVVSFFQHYANFDWSN----------DMVYDAFFHKKKPRYNRSTREPMVILSFHAPNSN 889
Query: 61 Y--KVSLGTLQVMTEQFQCGN-RICEVRAYFEIELGKAEWSALFEHYP-----FFEAYEN 112
+ K ++ LQ++ ++F+ + ++ E ++ + AL P F AY +
Sbjct: 890 FAQKSTVPGLQMLIKEFKAADMKLSEPGMTWQKFFSTSSDLALKPCLPSGVVEFLNAYSD 949
Query: 113 YLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKP 167
++++DI + A L+ GWVESR + + I + G + +P + D +
Sbjct: 950 FVKIDIQFWGRMLAKGKGLV---GWVESRCISIVVDIHKALPG-SEVRVWPALFTDDA-- 1003
Query: 168 CPNSA---------FFWGLSRKEVGT 184
PN + + GLS+ G+
Sbjct: 1004 -PNDSTDSNDFQGCYLIGLSKAAEGS 1028
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 28/226 (12%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+ FF ++ W W + ++ F + DP M ++T +Y +NS
Sbjct: 248 MLIFHFFEYFSSWDWD---IQLNLDSNTPDFQLNDP----------MILMTQSYPQINSL 294
Query: 61 YKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 120
V+ + + + ++ Q R E + + W LF+ FF Y +L +D++
Sbjct: 295 RAVTTSSRKRIIKELQ---RALETTK--KALISDLSWQELFKGGCFFADYRYFLCIDLIP 349
Query: 121 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 180
++ G++ S+ +L +KI ++ G+ + + +P+K K F+ GL+ K
Sbjct: 350 TNSQIKDEIIGFLSSKLTRL-VKILEEIPGICEANIWPSKISYGGKII----FYIGLNTK 404
Query: 181 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 226
S + + D NF I + + + I F + ++ L
Sbjct: 405 ----SGQSKTIDINHAKNNFISYISSSTLGK-AMSINFKIIRKKEL 445
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 20/161 (12%)
Query: 34 WDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELG 93
WDPR++ R +P+I PAY +N + V L+V + R+ + E L
Sbjct: 77 WDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCGLEVFYAELTYAYRLL---SNLETPL- 131
Query: 94 KAEWSALFEHYPFFEAYENYLQVDIVAADADD------LLTWKGWVESRFRQLTLKIEQD 147
++E Y + Y + V + + ++ L W +V S+ R L +E+
Sbjct: 132 ----ETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER- 186
Query: 148 TNGLLQCHPYPNKYID-PSKPCPNSAFFWGLSRKEVGTSKE 187
++ PYP K D P + P F S VG ++
Sbjct: 187 ---IVDARPYPQKLNDVPPRSVPKPGRFLKGSCFIVGIKEK 224
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 35/127 (27%)
Query: 5 RFFRVYTQWRWPNPVMMCPIEMGELGF-------------------SVWDPRKNPKDRSH 45
+FF+ Y+ W WPNP+++ + GF +W+P D H
Sbjct: 558 KFFKFYSSWEWPNPIIL------DQGFYDQENLLNPNGQQVKMNVKKIWNPISCIGDSQH 611
Query: 46 RMPIITPAYHC--------MNSSYKVSLGTLQVMTEQFQCGNRICEVRAYFEIELGKAEW 97
MPII+P N++ +V LQ+ +F+ +I ++ ++ ++ E
Sbjct: 612 LMPIISPQIKINTQKTITSTNTADQVLNSNLQIYLYEFKRAYKI--MKKIYKGKIKLKEL 669
Query: 98 SALFEHY 104
+ FE +
Sbjct: 670 GSAFESF 676
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 39.7 bits (91), Expect = 2.2, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 18/82 (21%)
Query: 2 LVSRFFRVYTQWRWPNPVMM-----CPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ FF W WP P+++ + +G SV MP++TP +
Sbjct: 1010 LMHAFFVHVANWPWPQPILLNMPLGATLPADAIGESV-------------MPVMTPTWPT 1056
Query: 57 MNSSYKVSLGTLQVMTEQFQCG 78
NS+ VS+ TL VM + Q G
Sbjct: 1057 RNSARVVSVSTLSVMRAELQRG 1078
>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
gi|219888671|gb|ACL54710.1| unknown [Zea mays]
Length = 214
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 207 YRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQ 266
Y + + G D+ ++V R +PS+VF GYK P+ H N+Q D S E Q
Sbjct: 2 YSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPTMHANQQEQS---DGDGTFSPYLESQ 58
Query: 267 LKRKKEHEIK-EVRPDKSVKQAFIS 290
LKRK + V KSVK+A +S
Sbjct: 59 LKRKYISDGDGHVDLCKSVKRASVS 83
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,620,981,183
Number of Sequences: 23463169
Number of extensions: 241142776
Number of successful extensions: 478463
Number of sequences better than 100.0: 718
Number of HSP's better than 100.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 476695
Number of HSP's gapped (non-prelim): 765
length of query: 327
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 185
effective length of database: 9,027,425,369
effective search space: 1670073693265
effective search space used: 1670073693265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)