BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020366
(327 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 162/340 (47%), Gaps = 39/340 (11%)
Query: 3 RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDS-LDVHVGQSVSVLVTLNQ-PPKD 60
RI++ + NF I H + +VE +G++ +Q Y S +D++ G+S SVL+T +Q P ++
Sbjct: 217 RIASTTALAALNFAIGNHQLLVVEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSEN 275
Query: 61 YYIVASTRF----TKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLT 116
Y++ TR T LT L + S P S P P P ++ +++ F + +T
Sbjct: 276 YWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPP-PQTPAWD---DFDRSKNFTYRIT 331
Query: 117 ANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNI 176
A P P F+ R I L N+ +ING +++A+N +S TP A +N+
Sbjct: 332 AAMGSPKPPVKFN-------RRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNL 384
Query: 177 ---------PGIFSVN-SIQSVPSGGASSVATSVMQVNLHEYIEVVFQN------NEKTM 220
P +F + I + P+ + + V Q + E ++V+ QN N
Sbjct: 385 LHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSET 444
Query: 221 QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
WHL G+DFWV+GYG G+++AE+ + NL + R+T ++P WT I DN G+W
Sbjct: 445 HPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWA 504
Query: 281 MRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCG 320
I ++G V + IP+ L CG
Sbjct: 505 FHCHIEPHLHMGMGVVFA--EGVEKVGR---IPTKALACG 539
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 113/290 (38%), Gaps = 48/290 (16%)
Query: 2 FRISNVGLSTSFN--FRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPK 59
+R+ + LS N F I GH + ++EV+G T + D L + GQ S ++ NQP
Sbjct: 195 YRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVD 254
Query: 60 DYYIVASTRFTKNVLTAT-------AILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFR 112
+Y+I A +N L T AIL Y +G PT + + Q
Sbjct: 255 NYWIRAQPNKGRNGLAGTFANGVNSAILRY-------AGAANADPTTSANPNPAQLNEAD 307
Query: 113 WNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLAD 172
+ + A P G G + L S R+ +NG +Y + P L
Sbjct: 308 LHALIDPAAP---GIPTPGAADVNLRFQLGFSG------GRFTINGTAYESPSVPTLLQ- 357
Query: 173 YFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFW 231
+ G S N + +P+G SV ++ ++ +E+V +HL G+ F
Sbjct: 358 --IMSGAQSANDL--LPAG-------SVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFS 406
Query: 232 VVGYGSGQWAAEKRRTYNLADTLTRHTAQ--VYPQSWTVILVSLDNQGMW 279
VV + TYN + + R V T+ V+ DN G W
Sbjct: 407 VV-------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-DNPGPW 448
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 113/290 (38%), Gaps = 48/290 (16%)
Query: 2 FRISNVGLSTSFN--FRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPK 59
+R+ + LS N F I GH + ++EV+G T + D L + GQ S ++ NQP
Sbjct: 195 YRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVD 254
Query: 60 DYYIVASTRFTKNVLTAT-------AILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFR 112
+Y+I A +N L T AIL Y +G PT + + Q
Sbjct: 255 NYWIRAQPNKGRNGLAGTFANGVNSAILRY-------AGAANADPTTSANPNPAQLNEAD 307
Query: 113 WNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLAD 172
+ + A P G G + L S R+ +NG +Y + P L
Sbjct: 308 LHALIDPAAP---GIPTPGAADVNLRFQLGFSG------GRFTINGTAYESPSVPTLLQ- 357
Query: 173 YFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFW 231
+ G S N + +P+G SV ++ ++ +E+V +HL G+ F
Sbjct: 358 --IMSGAQSANDL--LPAG-------SVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFS 406
Query: 232 VVGYGSGQWAAEKRRTYNLADTLTRHTAQ--VYPQSWTVILVSLDNQGMW 279
VV + TYN + + R V T+ V+ DN G W
Sbjct: 407 VV-------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-DNPGPW 448
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 122/322 (37%), Gaps = 82/322 (25%)
Query: 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLV-TLNQPPK 59
+ RI NVG S F I+ H M +VE++G T +N+ D L + V Q +VLV T N K
Sbjct: 189 LLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDK 248
Query: 60 DYYIVASTRFTKNV---------LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQART 110
++ I+ +F + L AT+ + Y + LPT +
Sbjct: 249 NFAIMQ--KFDDTMLDVIPSDLQLNATSYMVYN-----KTAALPT---------QNYVDS 292
Query: 111 FRWNLTANAARPNPQGSFHYGKIN--TTRTIVLANSAPLINGKLRYAVNGISYVNSDTPL 168
L +P + + YG+ + T +V+ N L NG N I+Y P
Sbjct: 293 IDNFLDDFYLQPYEKEAI-YGEPDHVITVDVVMDN---LKNGVNYAFFNNITYTAPKVP- 347
Query: 169 KLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLH-------EYIEVVFQNNEKTMQ 221
++ +V S G + + + N H E +E+V N +
Sbjct: 348 ---------------TLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTH 392
Query: 222 SWHLDGYDFWVVGYGSGQWAAEKRRTYNLA----------DT--------LTRHTAQVYP 263
+HL G+ F + ++ RTY+ A D + R T V P
Sbjct: 393 PFHLHGHAFQTI---------QRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRP 443
Query: 264 QSWTVILVSLDNQGMWNMRSAI 285
QS VI DN G+W I
Sbjct: 444 QSNFVIRFKADNPGVWFFHCHI 465
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FRI + ++ F I GH M ++EV+G DSL + GQ SV+V NQ +Y
Sbjct: 224 FRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNY 283
Query: 62 YIVASTRFTKNVLTA---TAILHY 82
+I A+ +N T +AI Y
Sbjct: 284 WIRANPSNGRNGFTGGINSAIFRY 307
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ ++ F I GH M ++E + +T + DS+ + Q S ++ NQ +Y
Sbjct: 198 FRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQAVDNY 257
Query: 62 YIVASTRFTKNVLTA---TAILHY 82
+I A+ F T +AIL Y
Sbjct: 258 WIRANPNFGNVGFTGGINSAILRY 281
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 24/121 (19%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ +F F I GH + ++EV+ S++ DS+ + Q S ++ NQ +Y
Sbjct: 198 FRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVDNY 257
Query: 62 YIVASTRF------------------------TKNVLTATAILHYTNSHSPASGPLPTGP 97
+I A+ F T N T+ L+ N H S P+P P
Sbjct: 258 WIRANPNFGNVGFNGGINSAILRYDGAPAVEPTTNQTTSVKPLNEVNLHPLVSTPVPGSP 317
Query: 98 T 98
+
Sbjct: 318 S 318
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 106/291 (36%), Gaps = 43/291 (14%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
R+ ++ +++F I GH M ++E +G + + D + + Q S ++ NQP +Y
Sbjct: 201 MRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNY 260
Query: 62 YIVASTRFTKNVLTA---TAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 118
+I A+ +AIL Y + + + P+ T ++ T L+ N
Sbjct: 261 WIRANPNSGGEGFDGGINSAILRYDGATT--ADPVTVASTVHTKCLIE---TDLHPLSRN 315
Query: 119 AARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTP--LKLADYFNI 176
NP +N + N + +NG+S+ P L++ N
Sbjct: 316 GVPGNPHQGGADCNLNLSLGFACGN----------FVINGVSFTPPTVPVLLQICSGAN- 364
Query: 177 PGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGY 235
+ +PSG SV+ + + IE+ +HL G+DF V
Sbjct: 365 ------TAADLLPSG-------SVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVS-- 409
Query: 236 GSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTV-ILVSLDNQGMWNMRSAI 285
+ T N D + R + V I DN G W + I
Sbjct: 410 -----ESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHI 455
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ ++ F I GH + ++EV+G ++ + DS+ + Q S ++ NQ +Y
Sbjct: 198 FRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGNY 257
Query: 62 YIVASTRF 69
+I A+ F
Sbjct: 258 WIRANPNF 265
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 115/317 (36%), Gaps = 64/317 (20%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
R+ NVG+ + F F I HT+ ++ + + D+L + +GQ V+V N +Y
Sbjct: 265 LRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNY 324
Query: 62 YIV---ASTRFTKN-VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 117
+I +T T N AT IL Y +S + P G T
Sbjct: 325 WIRGNWGTTCSTNNEAANATGILRYDSSS--IANPTSVGTT------------------- 363
Query: 118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN-- 175
P+G T +A+ P L V G S V+ +YF
Sbjct: 364 ------PRG--------TCEDEPVASLVP----HLALDVGGYSLVDEQVSSAFTNYFTWT 405
Query: 176 -----------IPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSW- 223
P + + +++ + VA + Q N +E V + W
Sbjct: 406 INSSSLLLDWSSPTTLKIFNNETIFPTEYNVVA--LEQTNANEEWVVYVIEDLTGFGIWH 463
Query: 224 --HLDGYDFWVVGYGSGQW-AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
HL G+DF++V + + + E +NL + R A + + I LDN G W
Sbjct: 464 PIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWL 523
Query: 281 MRSAI-WE-RQYLGQQF 295
+ I W + L QF
Sbjct: 524 LHCHIAWHASEGLAMQF 540
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 110/305 (36%), Gaps = 62/305 (20%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
R+ NVG+ + F F I HT+ ++ + + D+L + +GQ V+V N +Y
Sbjct: 265 LRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNY 324
Query: 62 YIV---ASTRFTKN-VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 117
+I +T T N AT IL Y +S + P G T
Sbjct: 325 WIRGNWGTTCSTNNEAANATGILRYDSSS--IANPTSVGTT------------------- 363
Query: 118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN-- 175
P+G T +A+ P L V G S V+ +YF
Sbjct: 364 ------PRG--------TCEDEPVASLVP----HLALDVGGYSLVDEQVSSAFTNYFTWT 405
Query: 176 -----------IPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSW- 223
P + + +++ + VA + Q N +E V + W
Sbjct: 406 INSSSLLLDWSSPTTLKIFNNETIFPTEYNVVA--LEQTNANEEWVVYVIEDLTGFGIWH 463
Query: 224 --HLDGYDFWVVGYGSGQW-AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
HL G+DF++V + + + E +NL + R A + + I LDN G W
Sbjct: 464 PIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWL 523
Query: 281 MRSAI 285
+ I
Sbjct: 524 LHCHI 528
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ ++ F I GH++ ++E + + + DSL + Q S ++ +Q +Y
Sbjct: 197 FRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVDNY 256
Query: 62 YIVA-STRFTKNVL--TATAILHY--------TNSHSPASGPL 93
+I A T+N T +AIL Y T S +P++ PL
Sbjct: 257 WIRALPNSGTQNFAGGTNSAILRYDGAAPVEPTTSQTPSTNPL 299
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ ++ F I GH++ ++E + + + DSL + Q S ++ +Q +Y
Sbjct: 197 FRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVDNY 256
Query: 62 YIVA-STRFTKNVL--TATAILHY--------TNSHSPASGPL 93
+I A T+N T +AIL Y T S +P++ PL
Sbjct: 257 WIRALPNSGTQNFAGGTNSAILRYDGAAPVEPTTSQTPSTNPL 299
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 115/299 (38%), Gaps = 47/299 (15%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
RI N F + HTM ++ + DSL + VGQ V++ ++ P +Y
Sbjct: 227 LRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Query: 62 YI------VASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNL 115
+ A+ + N A AI HY A G LPT E + ++
Sbjct: 287 WFNVTFGGQAACGGSLNPHPA-AIFHYAG----APGGLPTD---EGTPPVDHQCLDTLDV 338
Query: 116 TANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN 175
R P SF NT + PL + VNG S +N D + DY
Sbjct: 339 RPVVPRSVPVNSFVKRPDNTLPVALDLTGTPL----FVWKVNG-SDINVDWGKPIIDY-- 391
Query: 176 IPGIFSVNSIQSVPSGGASSVATSVMQVN-LHEYIEVVFQNNEKTMQS----WHLDGYDF 230
I + N+ + V+ +++QV+ + ++ + +N+ + S HL G+DF
Sbjct: 392 ---ILTGNT--------SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDF 440
Query: 231 WVVGYGSGQWAAEKRR-TYNLADTLTRHTAQVYPQ---------SWTVILVSLDNQGMW 279
V+G AA ++R ++ A L R P+ W ++ DN G W
Sbjct: 441 LVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAW 499
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 115/299 (38%), Gaps = 47/299 (15%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
RI N F + HTM ++ + DSL + VGQ V++ ++ P +Y
Sbjct: 227 LRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Query: 62 YI------VASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNL 115
+ A+ + N A AI HY A G LPT E + ++
Sbjct: 287 WFNVTFGGQAACGGSLNPHPA-AIFHYAG----APGGLPTD---EGTPPVDHQCLDTLDV 338
Query: 116 TANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN 175
R P SF NT + PL + VNG S +N D + DY
Sbjct: 339 RPVVPRSVPVNSFVKRPDNTLPVALDLTGTPL----FVWKVNG-SDINVDWGKPIIDY-- 391
Query: 176 IPGIFSVNSIQSVPSGGASSVATSVMQVN-LHEYIEVVFQNNEKTMQS----WHLDGYDF 230
I + N+ + V+ +++QV+ + ++ + +N+ + S HL G+DF
Sbjct: 392 ---ILTGNT--------SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDF 440
Query: 231 WVVGYGSGQWAAEKRR-TYNLADTLTRHTAQVYPQ---------SWTVILVSLDNQGMW 279
V+G AA ++R ++ A L R P+ W ++ DN G W
Sbjct: 441 LVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAW 499
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 115/299 (38%), Gaps = 47/299 (15%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
RI N F + HTM ++ + DSL + VGQ V++ ++ P +Y
Sbjct: 227 LRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Query: 62 YI------VASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNL 115
+ A+ + N A AI HY A G LPT E + ++
Sbjct: 287 WFNVTFGGQAACGGSLNPHPA-AIFHYAG----APGGLPTD---EGTPPVDHQCLDTLDV 338
Query: 116 TANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN 175
R P SF NT + PL + VNG S +N D + DY
Sbjct: 339 RPVVPRSVPVNSFVKRPDNTLPVALDLTGTPL----FVWKVNG-SDINVDWGKPIIDY-- 391
Query: 176 IPGIFSVNSIQSVPSGGASSVATSVMQVN-LHEYIEVVFQNNEKTMQS----WHLDGYDF 230
I + N+ + V+ +++QV+ + ++ + +N+ + S HL G+DF
Sbjct: 392 ---ILTGNT--------SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDF 440
Query: 231 WVVGYGSGQWAAEKRR-TYNLADTLTRHTAQVYPQ---------SWTVILVSLDNQGMW 279
V+G AA ++R ++ A L R P+ W ++ DN G W
Sbjct: 441 LVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAW 499
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ + F I HTM ++E + +T DS+ + Q S ++ +QP +Y
Sbjct: 198 FRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDASQPVDNY 257
Query: 62 YIVASTRFTKNVLTA---TAILHY 82
+I A+ F +AIL Y
Sbjct: 258 WIRANPAFGNTGFAGGINSAILRY 281
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ ++ F I H + ++E +G T DS+ + Q S ++ NQ +Y
Sbjct: 198 FRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQDVDNY 257
Query: 62 YIVASTRFTKNVLTA---TAILHYTNS 85
+I A+ F +AIL Y ++
Sbjct: 258 WIRANPNFGTTGFADGVNSAILRYDDA 284
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 24/120 (20%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ +F F I GH ++E + ++ DS+ + Q S + NQ +Y
Sbjct: 198 FRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNANQAVDNY 257
Query: 62 YIVASTRF------------------------TKNVLTATAILHYTNSHSPASGPLPTGP 97
+I A+ F T N T+T L+ TN H S P+P P
Sbjct: 258 WIRANPNFGNVGFNGGINSAILRYDGAPAVEPTTNQSTSTQPLNETNLHPLVSTPVPGSP 317
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ +F F I GH M ++EV+G + DS+ + Q S ++ Q +Y
Sbjct: 198 FRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQSVDNY 257
Query: 62 YIVA 65
+I A
Sbjct: 258 WIRA 261
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ + + F I GH + ++EV+ ++ DS+ + Q S ++ NQ +Y
Sbjct: 198 FRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNY 257
Query: 62 YIVASTRF 69
+I A+ F
Sbjct: 258 WIRANPNF 265
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ + + F I GH + ++EV+ ++ DS+ + Q S ++ NQ +Y
Sbjct: 198 FRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNY 257
Query: 62 YIVASTRF 69
+I A+ F
Sbjct: 258 WIRANPNF 265
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 109/299 (36%), Gaps = 58/299 (19%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ ++ + F I GH++ ++E + + DS+ + Q S ++ +Q +Y
Sbjct: 197 FRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSFVLNADQDVGNY 256
Query: 62 YIVA-STRFTKNVLTA--TAILHY--------TNSHSPASGPLPTGPTYEIHWSMKQART 110
+I A T+N +AIL Y T S +P++ PL ++ A T
Sbjct: 257 WIRALPNSGTRNFDGGVNSAILRYDGAAPVEPTTSQTPSTNPL-----------VESALT 305
Query: 111 FRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKL 170
TA P P G + LA + ++ +NG S+ P+ L
Sbjct: 306 -TLEGTAAPGSPAPGG------------VDLALNMAFGFAGGKFTINGASFTPPTVPVLL 352
Query: 171 ADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKT---MQSWHLDG 227
+ G S + +PSG SV + + IE+ +HL G
Sbjct: 353 Q---ILSGAQSAQDL--LPSG-------SVYSLPANADIEISLPATAAAPGFPHPFHLHG 400
Query: 228 YDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQV-YPQSWTVILVSLDNQGMWNMRSAI 285
+ F VV + TYN + + R P I DN G W + I
Sbjct: 401 HTFAVV-------RSAGSSTYNYENPVYRDVVSTGSPGDNVTIRFRTDNPGPWFLHCHI 452
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
FR+ + ++ F I GH M +++V+ + + + ++ Q S ++ NQ +Y
Sbjct: 198 FRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSFILNANQAVNNY 257
Query: 62 YIVASTR-----FTKNVLTATAILHYTNS 85
+I A+ FT + +AIL Y+ +
Sbjct: 258 WIRANPNQGNVGFTNGI--NSAILRYSGA 284
>pdb|1TCM|A Chain A, Cyclodextrin Glycosyltransferase W616a Mutant From
Bacillus Circulans Strain 251
pdb|1TCM|B Chain B, Cyclodextrin Glycosyltransferase W616a Mutant From
Bacillus Circulans Strain 251
Length = 686
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKN 72
+ G + + T N+YD+ +V G VSV +N ++ Y+ S N
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGN 615
Query: 73 VLTATAI--------LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 118
A AI Y N + S +P G T E + KQ T W +N
Sbjct: 616 ADPAKAIGPMYNQVVYQYPNWYYDVS--VPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1PJ9|A Chain A, Bacillus Circulans Strain 251 Loop Mutant 183-195
Length = 686
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CGW|A Chain A, Site Directed Mutations Of The Active Site Residue
Tyrosine 195 Of Cyclodextrin Glycosyltransferase From
Bacillus Circulans Strain 251 Affecting Activity And
Product Specificity
Length = 686
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1KCL|A Chain A, Bacillus Ciruclans Strain 251 Cyclodextrin Glycosyl
Transferase Mutant G179l
Length = 686
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1OT2|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyl
Transferase Mutant D135n
Length = 686
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CGX|A Chain A, Site Directed Mutations Of The Active Site Residue
Tyrosine 195 Of Cyclodextrin Glyxosyltransferase From
Bacillus Circulans Strain 251 Affecting Activity And
Product Specificity
Length = 686
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1OT1|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyl
Transferase Mutant D135a
Length = 686
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1EO5|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin
Glycosyltransferase In Complex With Maltoheptaose
pdb|1EO7|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin
Glycosyltransferase In Complex With Maltohexaose
Length = 686
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CGV|A Chain A, Site Directed Mutations Of The Active Site Residue
Tyrosine 195 Of Cyclodextrin Glycosyltransferase From
Bacillus Circulans Strain 251 Affecting Activity And
Product Specificity
pdb|2DIJ|A Chain A, Complex Of A Y195f Mutant Cgtase From B. Circulans Strain
251 Complexed With A Maltononaose Inhibitor At Ph 9.8
Obtained After Soaking The Crystal With Acarbose And
Maltohexaose
Length = 686
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1KCK|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyl
Transferase Mutant N193g
Length = 686
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CXK|A Chain A, Complex Between A Maltononaose Substrate And Bacillus
Circulans Strain 251 Cgtase E257qD229N
pdb|1D3C|A Chain A, Michaelis Complex Of Bacillus Circulans Strain 251
Cyclodextrin Glycosyltransferase With Gamma-Cyclodextrin
pdb|1CXF|A Chain A, Complex Of A (D229nE257Q) DOUBLE MUTANT CGTASE FROM
Bacillus Circulans Strain 251 With Maltotetraose At 120
K And Ph 9.1 Obtained After Soaking The Crystal With
Alpha- Cyclodextrin
Length = 686
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CDG|A Chain A, Nucleotide Sequence And X-Ray Structure Of Cyclodextrin
Glycosyltransferase From Bacillus Circulans Strain 251
In A Maltose-Dependent Crystal Form
pdb|1CXE|A Chain A, Complex Of Cgtase With Maltotetraose At Room Temperature
And Ph 9.1 Based On Diffraction Data Of A Crystal Soaked
With Alpha-Cyclodextrin
pdb|1CXH|A Chain A, Complex Of Cgtase With Maltotetraose At Room Temperature
And Ph 9.6 Based On Diffraction Data Of A Crystal Soaked
With Maltoheptaose
pdb|1CXI|A Chain A, Wild-Type Cgtase From Bacillus Circulans Strain 251 At 120
K And Ph 7.55
pdb|2CXG|A Chain A, Cyclodextrin Glycosyltransferase Complexed To The
Inhibitor Acarbose
Length = 686
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1DTU|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin
Glycosyltransferase: A Mutant Y89dS146P COMPLEXED TO AN
Hexasaccharide Inhibitor
Length = 686
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CXL|A Chain A, Complex Between A Covalent Intermediate And Bacillus
Circulans Strain 251 Cgtase E257q
Length = 686
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1CGY|A Chain A, Site Directed Mutations Of The Active Site Residue
Tyrosine 195 Of Cyclodextrin Glyxosyltransferase From
Bacillus Circulans Strain 251 Affecting Activity And
Product Specificity
Length = 686
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSN 667
>pdb|1PEZ|A Chain A, Bacillus Circulans Strain 251 Mutant A230v
Length = 686
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 26/120 (21%)
Query: 17 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTA 76
+ G + + T N+YD+ +V G VSV +N A+T +NV
Sbjct: 556 VAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNN--------ATTALGQNVYLT 607
Query: 77 TAILHYTN-SHSPASGPL-----------------PTGPTYEIHWSMKQARTFRWNLTAN 118
++ N + A GP+ P G T E + KQ T W +N
Sbjct: 608 GSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTATWEGGSN 667
>pdb|1P15|A Chain A, Crystal Structure Of The D2 Domain Of Rptpa
pdb|1P15|B Chain B, Crystal Structure Of The D2 Domain Of Rptpa
Length = 253
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 210 EVVFQNNEKTMQSWHLDGYDFWVVGYGS---GQWAAEKRRTYNLADTL--------TRHT 258
E+ + EK Q W DG +V YG E+ +Y + D L +R
Sbjct: 85 ELEERGQEKCAQYWPSDG----LVSYGDITVELKKEEECESYTVRDLLVTNTRENKSRQI 140
Query: 259 AQVYPQSWTVILVSLDNQGMWNMRSAIWERQ 289
Q + W + + D +GM N+ +A+ ++Q
Sbjct: 141 RQFHFHGWPEVGIPSDGKGMINIIAAVQKQQ 171
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.131 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,237,383
Number of Sequences: 62578
Number of extensions: 422814
Number of successful extensions: 1094
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1041
Number of HSP's gapped (non-prelim): 63
length of query: 327
length of database: 14,973,337
effective HSP length: 99
effective length of query: 228
effective length of database: 8,778,115
effective search space: 2001410220
effective search space used: 2001410220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)