Query 020366
Match_columns 327
No_of_seqs 177 out of 1258
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 15:48:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020366.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020366hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 2E-63 6.7E-68 493.0 32.0 304 1-323 215-542 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.6E-60 5.5E-65 470.5 26.7 288 1-323 264-565 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 2.8E-58 9.5E-63 449.1 29.5 290 1-327 197-496 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 3.1E-58 1E-62 448.7 27.7 287 1-324 200-493 (495)
5 1zpu_A Iron transport multicop 100.0 7E-58 2.4E-62 450.7 30.5 291 1-322 189-503 (534)
6 1v10_A Laccase; multicopper bl 100.0 1.1E-56 3.9E-61 441.4 27.3 288 1-326 223-515 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 3.1E-56 1E-60 436.8 26.5 288 1-326 196-494 (503)
8 2q9o_A Laccase-1; multicopper 100.0 4.4E-56 1.5E-60 440.4 27.2 295 1-324 226-545 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 1.3E-51 4.4E-56 397.9 27.4 223 1-300 198-439 (439)
10 3abg_A Bilirubin oxidase; clea 100.0 2.4E-49 8.3E-54 389.5 25.3 239 1-303 222-477 (534)
11 2wsd_A Spore coat protein A; o 100.0 1.5E-47 5.1E-52 376.0 25.4 242 1-302 251-511 (513)
12 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.9E-47 9.9E-52 368.3 22.0 223 1-302 203-442 (451)
13 3gyr_A PHS, phenoxazinone synt 100.0 2E-46 6.7E-51 376.1 27.5 261 1-304 275-594 (612)
14 3aw5_A Multicopper oxidase; be 100.0 9.2E-47 3.2E-51 364.4 24.1 226 1-299 190-447 (448)
15 3zx1_A Oxidoreductase, putativ 100.0 1.6E-44 5.6E-49 350.0 26.5 231 1-301 231-481 (481)
16 2g23_A PHS, phenoxazinone synt 100.0 9.4E-43 3.2E-47 345.8 30.1 243 1-301 275-591 (612)
17 3od3_A Blue copper oxidase CUE 100.0 6.8E-43 2.3E-47 338.7 23.4 231 1-299 204-488 (488)
18 2dv6_A Nitrite reductase; elec 100.0 1.8E-28 6E-33 237.1 10.4 225 1-302 206-434 (447)
19 3cg8_A Laccase; oxidoreductase 99.9 1.9E-27 6.6E-32 221.8 13.4 94 201-302 211-307 (343)
20 2zwn_A Two-domain type laccase 99.9 1.8E-26 6.3E-31 215.1 14.5 218 1-300 46-276 (339)
21 3gdc_A Multicopper oxidase; be 99.9 5.3E-25 1.8E-29 200.7 12.7 206 1-301 77-288 (288)
22 3kw8_A Laccase, putative coppe 99.9 7.6E-25 2.6E-29 198.5 13.0 97 201-305 170-269 (276)
23 3tas_A Small laccase, multi-co 99.9 4E-23 1.4E-27 190.4 13.9 111 201-321 176-290 (313)
24 3t9w_A Small laccase, multi-co 99.9 1.4E-23 4.7E-28 192.2 9.6 96 201-304 192-290 (299)
25 3g5w_A Multicopper oxidase typ 99.9 7.6E-23 2.6E-27 188.9 11.3 91 201-301 180-276 (318)
26 2j5w_A Ceruloplasmin, ferroxid 99.9 2E-22 6.7E-27 212.4 10.4 89 199-303 970-1060(1065)
27 1sdd_B Coagulation factor V; c 99.8 4.5E-20 1.5E-24 185.8 15.9 227 1-300 80-326 (647)
28 1sdd_A Coagulation factor V; c 99.8 2.2E-21 7.4E-26 178.3 0.4 213 1-302 71-301 (306)
29 2j5w_A Ceruloplasmin, ferroxid 99.8 2.8E-19 9.6E-24 188.5 14.9 262 1-302 282-562 (1065)
30 2bw4_A Copper-containing nitri 99.8 2E-17 6.7E-22 154.1 18.0 89 201-301 233-324 (340)
31 2r7e_B Coagulation factor VIII 99.7 1.8E-19 6E-24 183.5 0.4 84 201-300 370-455 (770)
32 1kbv_A ANIA, major outer membr 99.7 3.5E-17 1.2E-21 151.5 15.1 90 201-301 216-307 (327)
33 2r7e_A Coagulation factor VIII 99.7 3E-18 1E-22 174.1 2.5 82 201-301 246-329 (742)
34 2r7e_A Coagulation factor VIII 99.7 2.5E-18 8.6E-23 174.7 -1.3 83 201-302 628-712 (742)
35 1mzy_A Copper-containing nitri 99.6 1.3E-14 4.5E-19 134.6 12.2 90 201-301 227-318 (333)
36 1kbv_A ANIA, major outer membr 99.5 6.6E-15 2.3E-19 136.2 6.5 85 1-86 225-309 (327)
37 1oe1_A Dissimilatory copper-co 99.4 2.9E-12 9.8E-17 118.9 13.0 89 201-301 227-318 (336)
38 2zoo_A Probable nitrite reduct 99.4 1.2E-12 4.2E-17 125.8 10.8 92 201-303 206-299 (442)
39 2dv6_A Nitrite reductase; elec 99.4 2.3E-11 7.7E-16 117.1 18.7 80 201-301 197-281 (447)
40 2aan_A Auracyanin A; cupredoxi 99.3 2.4E-12 8.1E-17 104.3 7.6 92 201-299 37-138 (139)
41 2zoo_A Probable nitrite reduct 99.3 1.3E-12 4.6E-17 125.6 6.4 85 1-86 215-299 (442)
42 3cvb_A Plastocyanin; cupredoxi 99.3 2E-11 6.9E-16 93.6 9.1 85 199-300 19-104 (105)
43 2zwn_A Two-domain type laccase 99.2 3.4E-11 1.2E-15 111.8 11.3 84 1-86 190-279 (339)
44 3gdc_A Multicopper oxidase; be 99.2 3.7E-11 1.3E-15 109.0 11.0 85 201-302 68-155 (288)
45 3g5w_A Multicopper oxidase typ 99.1 2.1E-10 7.3E-15 105.4 11.3 84 1-86 189-278 (318)
46 1oe1_A Dissimilatory copper-co 99.0 1.9E-10 6.4E-15 106.6 5.8 84 1-86 234-320 (336)
47 2gim_A Plastocyanin; beta shee 99.0 1.7E-09 5.9E-14 82.9 8.3 84 200-300 21-105 (106)
48 1qhq_A Protein (auracyanin); e 98.9 4.5E-09 1.5E-13 84.9 9.3 95 201-300 35-139 (140)
49 2bw4_A Copper-containing nitri 98.9 1.3E-09 4.5E-14 101.1 5.7 84 1-86 240-326 (340)
50 1mzy_A Copper-containing nitri 98.9 1.4E-09 4.9E-14 100.6 5.8 84 1-86 234-320 (333)
51 1pcs_A Plastocyanin; electron 98.8 8.7E-09 3E-13 77.8 6.4 78 200-299 20-97 (98)
52 1bxv_A Plastocyanin; copper pr 98.8 3.1E-08 1E-12 73.5 9.2 71 200-299 20-90 (91)
53 2plt_A Plastocyanin; electron 98.8 2E-08 6.9E-13 75.7 8.3 79 200-299 19-97 (98)
54 1b3i_A PETE protein, protein ( 98.7 1.4E-08 4.9E-13 76.4 4.4 77 200-299 20-96 (97)
55 1iby_A Nitrosocyanin; RED copp 98.7 1.1E-07 3.8E-12 73.5 9.4 73 200-300 39-111 (112)
56 1byp_A Protein (plastocyanin); 98.6 6.5E-08 2.2E-12 73.0 5.5 81 200-299 18-98 (99)
57 4hci_A Cupredoxin 1; structura 98.5 4.4E-07 1.5E-11 68.7 8.6 70 201-299 30-99 (100)
58 3kw8_A Laccase, putative coppe 98.5 2.4E-07 8.3E-12 83.2 7.5 87 200-303 37-142 (276)
59 1kdj_A Plastocyanin; electron 98.4 4.6E-07 1.6E-11 68.6 7.0 84 199-299 17-101 (102)
60 1sdd_B Coagulation factor V; c 98.4 2E-07 7E-12 93.6 5.8 61 1-67 250-311 (647)
61 3cg8_A Laccase; oxidoreductase 98.3 1E-06 3.6E-11 81.6 7.8 86 200-302 78-182 (343)
62 1aoz_A Ascorbate oxidase; oxid 98.3 2.4E-06 8.2E-11 84.2 10.7 88 201-302 36-124 (552)
63 3tas_A Small laccase, multi-co 98.3 1.4E-06 4.7E-11 79.7 7.6 88 199-303 42-148 (313)
64 1plc_A Plastocyanin; electron 98.3 1.4E-06 4.6E-11 65.7 6.3 82 199-299 17-98 (99)
65 2q9o_A Laccase-1; multicopper 98.3 3.1E-06 1.1E-10 83.4 10.1 88 201-302 69-158 (559)
66 1hfu_A Laccase 1; oxidoreducta 98.2 4E-06 1.4E-10 81.6 9.9 89 201-303 36-130 (503)
67 2xu9_A Laccase; oxidoreductase 98.2 2.5E-06 8.6E-11 81.6 8.0 76 200-286 189-265 (439)
68 1v10_A Laccase; multicopper bl 98.2 5.5E-06 1.9E-10 81.0 10.3 83 201-303 57-151 (521)
69 3t9w_A Small laccase, multi-co 98.2 3.7E-06 1.3E-10 76.4 8.5 88 199-303 58-164 (299)
70 1sdd_A Coagulation factor V; c 98.2 2.8E-06 9.4E-11 77.5 7.2 93 200-302 61-167 (306)
71 3pxl_A Laccase; 4-copper prote 98.1 1.5E-05 5E-10 77.5 11.7 90 201-304 36-131 (499)
72 3t6v_A Laccase; beta barrel, o 98.1 1.8E-05 6.1E-10 76.8 12.0 85 200-304 36-132 (495)
73 2cal_A Rusticyanin; iron respi 98.1 1.9E-05 6.4E-10 64.5 9.8 82 200-299 62-153 (154)
74 1zpu_A Iron transport multicop 98.1 1.3E-05 4.3E-10 78.7 10.2 89 201-303 36-126 (534)
75 3sqr_A Laccase; multicopper ox 98.1 1.6E-05 5.4E-10 78.5 10.9 89 201-303 100-189 (580)
76 2uxt_A Protein SUFI, SUFI; oxi 98.1 5E-06 1.7E-10 79.8 7.1 85 200-303 51-140 (451)
77 2ov0_A Amicyanin; beta-sandwic 98.1 1.7E-05 5.9E-10 60.3 8.6 70 201-299 35-104 (105)
78 1fwx_A Nitrous oxide reductase 98.0 2E-05 6.9E-10 77.5 10.7 76 199-301 513-592 (595)
79 3aw5_A Multicopper oxidase; be 98.0 1.2E-05 4.2E-10 77.1 8.1 86 200-304 39-129 (448)
80 3od3_A Blue copper oxidase CUE 97.9 2E-05 6.9E-10 76.2 8.5 86 200-304 49-139 (488)
81 3zx1_A Oxidoreductase, putativ 97.9 2.2E-05 7.6E-10 75.8 8.3 85 201-304 84-174 (481)
82 3abg_A Bilirubin oxidase; clea 97.7 5.6E-05 1.9E-09 74.0 8.2 87 199-304 69-160 (534)
83 2r7e_B Coagulation factor VIII 97.7 1.6E-05 5.4E-10 81.1 3.6 89 199-303 199-299 (770)
84 3erx_A Pseudoazurin; copper pr 97.6 0.00011 3.7E-09 57.6 6.6 75 200-303 22-96 (123)
85 3tu6_A Pseudoazurin (blue copp 97.6 6.3E-05 2.2E-09 59.3 5.0 75 200-303 24-98 (127)
86 3ef4_A Pseudoazurin, blue copp 97.5 0.00018 6E-09 56.4 6.4 75 200-303 23-97 (124)
87 1iuz_A Plastocyanin; electron 97.5 0.00067 2.3E-08 50.6 9.0 80 199-299 18-97 (98)
88 2wsd_A Spore coat protein A; o 97.3 0.00031 1.1E-08 68.4 7.2 90 201-304 60-179 (513)
89 2g23_A PHS, phenoxazinone synt 97.3 0.00039 1.3E-08 69.0 7.9 44 260-303 148-196 (612)
90 1id2_A Amicyanin; beta barrel, 97.3 0.001 3.5E-08 50.4 8.4 70 201-299 36-105 (106)
91 3c75_A Amicyanin; copper prote 97.1 0.0017 5.9E-08 51.3 8.4 70 201-299 62-131 (132)
92 1paz_A Pseudoazurin precursor; 97.1 0.00098 3.4E-08 52.1 6.7 38 262-303 59-96 (123)
93 1pmy_A Pseudoazurin; electron 97.1 0.001 3.4E-08 52.0 6.6 39 261-303 58-96 (123)
94 3sbq_A Nitrous-oxide reductase 96.6 0.011 3.8E-07 57.4 10.7 75 199-300 558-636 (638)
95 2ux6_A Pseudoazurin; type-1 co 96.5 0.0067 2.3E-07 47.2 7.1 73 200-303 22-94 (122)
96 3gyr_A PHS, phenoxazinone synt 96.5 0.0024 8.2E-08 63.3 5.7 105 200-304 66-197 (612)
97 3ay2_A Lipid modified azurin p 96.3 0.013 4.3E-07 48.1 8.0 94 201-300 60-166 (167)
98 1cuo_A Protein (azurin ISO-2); 96.2 0.029 9.8E-07 44.0 9.2 95 201-300 20-128 (129)
99 2cua_A Protein (CUA); CUA cent 95.9 0.047 1.6E-06 43.1 9.2 72 201-300 62-134 (135)
100 3s8f_B Cytochrome C oxidase su 95.5 0.09 3.1E-06 43.0 9.4 72 201-300 95-167 (168)
101 2iaa_C Azurin; quinoprotein, t 95.2 0.11 3.6E-06 40.6 8.7 95 201-300 19-127 (128)
102 2ccw_A Azurin II, AZN-2; elect 95.2 0.12 3.9E-06 40.5 8.9 94 201-300 20-128 (129)
103 1nwp_A Azurin; electron transp 94.9 0.13 4.4E-06 40.1 8.5 89 201-299 20-127 (128)
104 3fsa_A Azurin; copper, cupredo 93.7 0.54 1.8E-05 36.4 9.4 91 201-299 20-124 (125)
105 2aan_A Auracyanin A; cupredoxi 89.3 0.25 8.5E-06 38.8 3.2 29 37-66 96-124 (139)
106 1cyx_A CYOA; electron transpor 86.9 2.1 7.1E-05 36.0 7.5 74 199-300 41-115 (205)
107 3hb3_B Cytochrome C oxidase su 84.7 2.7 9.4E-05 37.4 7.7 77 199-303 189-266 (298)
108 2gsm_B Cytochrome C oxidase su 79.2 5 0.00017 35.0 7.2 76 199-302 171-247 (262)
109 3isy_A Bsupi, intracellular pr 78.5 6.6 0.00023 29.9 6.8 30 37-66 69-100 (120)
110 3cvb_A Plastocyanin; cupredoxi 76.5 1 3.6E-05 32.9 1.7 30 37-66 61-90 (105)
111 1iby_A Nitrosocyanin; RED copp 76.4 5.2 0.00018 29.6 5.8 28 39-67 70-97 (112)
112 2r39_A FIXG-related protein; s 74.2 6.7 0.00023 29.5 5.9 44 1-54 36-81 (118)
113 1v54_B Cytochrome C oxidase po 72.0 7.6 0.00026 33.1 6.3 76 199-302 140-216 (227)
114 1fft_B Ubiquinol oxidase; elec 59.1 7.8 0.00027 34.8 3.9 73 200-300 152-225 (315)
115 1nwp_A Azurin; electron transp 48.5 13 0.00045 28.5 3.2 26 41-66 86-113 (128)
116 1x9u_A Umecyanin; cupredoxin, 46.9 20 0.00069 27.0 3.9 33 270-302 73-106 (116)
117 2iaa_C Azurin; quinoprotein, t 44.5 18 0.0006 27.8 3.3 28 39-66 83-112 (128)
118 2ccw_A Azurin II, AZN-2; elect 35.0 26 0.00088 26.8 2.9 27 40-66 85-113 (129)
119 4b9x_A TDRD1, tudor domain-con 34.2 13 0.00045 31.3 1.2 36 31-66 2-37 (226)
120 3lae_A UPF0053 protein HI0107; 31.6 44 0.0015 23.0 3.5 24 14-37 55-78 (81)
121 1ws8_A Mavicyanin; oxidized fo 31.1 52 0.0018 24.3 4.0 33 270-302 73-105 (109)
122 4b9w_A TDRD1, tudor domain-con 31.1 16 0.00055 30.1 1.2 36 31-66 2-37 (201)
123 1cuo_A Protein (azurin ISO-2); 30.5 34 0.0012 26.1 3.0 27 40-66 85-113 (129)
124 2wgn_B Inhibitor of cysteine p 30.2 1.8E+02 0.0061 22.2 7.0 69 201-279 37-105 (132)
125 1jer_A Cucumber stellacyanin; 29.8 73 0.0025 24.6 4.8 33 271-303 77-110 (138)
126 1eqw_A Cu,Zn superoxide dismut 28.3 32 0.0011 27.3 2.5 27 203-229 27-53 (156)
127 1eso_A SOD, Cu, Zn superoxide 27.8 33 0.0011 27.2 2.5 27 203-229 27-53 (154)
128 3t91_A Stage II sporulation pr 27.5 73 0.0025 26.4 4.9 26 2-29 107-132 (242)
129 2aqm_A Superoxide dismutase [C 27.4 32 0.0011 27.3 2.3 26 204-229 28-53 (154)
130 1oal_A Superoxide dismutase; o 27.2 34 0.0012 27.0 2.5 27 203-229 24-50 (151)
131 3llb_A Uncharacterized protein 26.8 62 0.0021 22.3 3.6 24 14-37 55-78 (83)
132 2pls_A CBS domain protein; APC 25.4 64 0.0022 22.3 3.5 24 14-37 59-82 (86)
133 2v33_A E1 envelope glycoprotei 24.9 52 0.0018 23.4 2.7 22 264-285 22-43 (91)
134 2x3c_A Toxic extracellular end 24.9 62 0.0021 29.2 4.0 31 37-67 92-127 (343)
135 2aqp_A Superoxide dismutase [C 24.7 40 0.0014 27.0 2.5 27 203-229 36-62 (164)
136 2wyt_A Superoxide dismutase [C 24.5 52 0.0018 26.0 3.1 23 207-229 29-51 (153)
137 2oai_A Hemolysin; PFAM03471, x 24.2 68 0.0023 22.7 3.5 24 14-37 67-90 (94)
138 1z9n_A Superoxide dismutase [C 23.7 43 0.0015 27.2 2.5 27 203-229 49-75 (177)
139 2pli_A Uncharacterized protein 23.5 76 0.0026 22.2 3.6 24 14-37 64-87 (91)
140 3f7l_A Copper,zinc superoxide 23.1 51 0.0017 26.0 2.8 26 204-229 24-49 (152)
141 2q2l_A Superoxide dismutase; S 23.0 55 0.0019 25.8 3.0 26 204-229 24-50 (152)
142 3pu7_A Superoxide dismutase [C 22.9 62 0.0021 25.5 3.2 27 203-229 24-51 (154)
143 3kbe_A Superoxide dismutase [C 22.8 66 0.0022 25.5 3.4 23 207-229 28-50 (157)
144 2p4p_A Hypothetical protein HD 22.6 78 0.0027 21.9 3.5 24 14-37 57-80 (86)
145 3pu9_A Protein serine/threonin 22.3 1.4E+02 0.005 24.7 5.8 13 2-14 110-122 (242)
146 2p13_A CBS domain; alpha-beta 22.2 53 0.0018 23.0 2.5 24 14-37 63-86 (90)
147 2o3g_A Putative protein; APC85 22.0 80 0.0027 22.2 3.5 24 14-37 65-88 (92)
148 2yev_B Cytochrome C oxidase su 27.2 19 0.00066 32.4 0.0 75 200-302 142-217 (337)
149 2nqw_A CBS domain protein; PFA 21.4 87 0.003 22.0 3.6 23 14-36 66-88 (93)
150 2z0b_A GDE5, KIAA1434, putativ 21.4 1.5E+02 0.005 22.4 5.1 48 226-273 21-75 (131)
151 1xtm_B Hypothetical superoxide 21.2 62 0.0021 26.1 3.0 26 204-229 42-70 (175)
152 4a7u_A Superoxide dismutase [C 20.6 44 0.0015 26.4 1.9 23 207-229 29-51 (153)
153 3arc_O Photosystem II manganes 20.3 1.5E+02 0.0051 25.1 5.1 39 15-56 82-121 (243)
154 3l9y_A Cu-znsod1, superoxide d 20.3 45 0.0015 26.4 1.9 24 206-229 27-50 (154)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2e-63 Score=493.03 Aligned_cols=304 Identities=28% Similarity=0.524 Sum_probs=233.4
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEe-CCCCCceEEEEEecccC-CCceeEE
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTL-NQPPKDYYIVASTRFTK-NVLTATA 78 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~-~~~~~~y~ir~~~~~~~-~~~~~~a 78 (327)
||||||+|+.+.+.|+|+||+|+|||+||++++|+.+++|.|++||||||+|++ ++++|+|||++....+. ......|
T Consensus 215 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~a 294 (552)
T 1aoz_A 215 RIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLT 294 (552)
T ss_dssp EEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEE
T ss_pred EEEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEE
Confidence 899999999999999999999999999999999999999999999999999999 55678999999876542 3456889
Q ss_pred EEEecCCCCC--CCCCCCCCCC-CcccccccccccccccccccC---CCCCCCCCCCCCCcCceEEEEEeccccccCCeE
Q 020366 79 ILHYTNSHSP--ASGPLPTGPT-YEIHWSMKQARTFRWNLTANA---ARPNPQGSFHYGKINTTRTIVLANSAPLINGKL 152 (327)
Q Consensus 79 il~y~~~~~~--~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 152 (327)
+|+|.+.... .+.+.|..|. ++.+.. |. + .+.+.. +.+.| ..+++++.+...+...++..
T Consensus 295 il~y~~~~~~~~p~~~~p~~p~~~~~~~~---~~-~--~l~~l~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~ 360 (552)
T 1aoz_A 295 LLNYLPNSVSKLPTSPPPQTPAWDDFDRS---KN-F--TYRITAAMGSPKPP--------VKFNRRIFLLNTQNVINGYV 360 (552)
T ss_dssp EEEETTSCTTSCCSSCCCCCCCTTCHHHH---HH-H--HTTCCBCTTCCCCC--------SSCSEEEEEEEEEEEETTEE
T ss_pred EEEECCCCCCCCCCCCCCCCCcccccccc---cc-c--cccccccCCCCCCC--------CCCcEEEEEEEeeccCCCeE
Confidence 9999876421 1112222221 111110 00 0 111111 11111 24577877765433345567
Q ss_pred EEEEcCccCcCCCCccccccccCCCCccccCCCCC----------CCCCCCCcceeeEEEecCCcEEEEEEEeCCC----
Q 020366 153 RYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQS----------VPSGGASSVATSVMQVNLHEYIEVVFQNNEK---- 218 (327)
Q Consensus 153 ~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~----------~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~---- 218 (327)
.|+|||++|..++.|+|.+.+.++.|+|+.+.... .+.+...+.+++++.++.|++|||+|+|.+.
T Consensus 361 ~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~ 440 (552)
T 1aoz_A 361 KWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKEN 440 (552)
T ss_dssp EEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTT
T ss_pred EEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccc
Confidence 89999999998899999877666666665332110 0112344667888999999999999999874
Q ss_pred --CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEE
Q 020366 219 --TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFY 296 (327)
Q Consensus 219 --~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~ 296 (327)
..||||||||+||||++|.|.|++.....+|+.+|+|||||.|+++||++|||+|||||+|||||||++|+++|||++
T Consensus 441 ~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~ 520 (552)
T 1aoz_A 441 LSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVV 520 (552)
T ss_dssp CCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEE
T ss_pred cCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEE
Confidence 469999999999999999999987545578999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcccccccCCCCCchhhccccC
Q 020366 297 LKVWNAVHSLANEYDIPSNILVCGKAV 323 (327)
Q Consensus 297 ~~v~~~~~~~~~~~~~P~~~~~C~~~~ 323 (327)
|.+... .+ .++|+++++|++++
T Consensus 521 ~~~~~~--~~---~~~P~~~~~C~~~~ 542 (552)
T 1aoz_A 521 FAEGVE--KV---GRIPTKALACGGTA 542 (552)
T ss_dssp EEECGG--GC---CCCCHHHHSSHHHH
T ss_pred EEeCch--hh---ccCCcchhhhhccC
Confidence 976532 33 66899999999876
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.6e-60 Score=470.55 Aligned_cols=288 Identities=20% Similarity=0.294 Sum_probs=214.6
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC----CCcee
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK----NVLTA 76 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~----~~~~~ 76 (327)
||||||+|+.+.+.|+||||+|+|||+||.+++|+++++|.|++||||||||+++++.|+||||+.....+ ...+.
T Consensus 264 RlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~ 343 (580)
T 3sqr_A 264 RLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANA 343 (580)
T ss_dssp EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGC
T ss_pred EEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCce
Confidence 89999999999999999999999999999999999999999999999999999999889999999875321 12468
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCccccccccccccc-ccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEE
Q 020366 77 TAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFR-WNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYA 155 (327)
Q Consensus 77 ~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~-~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 155 (327)
+|||+|.++... .|..+.... ...|.+.. ..|.|..+.+.|. ..+.++.+... .++..+|+
T Consensus 344 ~aiL~Y~~~~~~----~P~~~~~~~---~~~~~~~~~~~L~P~~~~~~~~--------~~~~~~~l~~~---~~~~~~w~ 405 (580)
T 3sqr_A 344 TGILRYDSSSIA----NPTSVGTTP---RGTCEDEPVASLVPHLALDVGG--------YSLVDEQVSSA---FTNYFTWT 405 (580)
T ss_dssp EEEEESSTTCCC----CCCCCCCCC---CCCSCCSCGGGCCBSSCCBCCS--------EEEEEEEEEEE---ESSSEEEE
T ss_pred EEEEEECCCCCC----CCCCCCCCc---cchhhcccccccccCCCCCCCC--------ccceEEEEEec---cCCceeEE
Confidence 999999865421 121111000 01121111 2355543333221 23344444331 24567999
Q ss_pred EcCccCc-CCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEec----CCcEEEEEEEeCC--CCcCceeecCC
Q 020366 156 VNGISYV-NSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVN----LHEYIEVVFQNNE--KTMQSWHLDGY 228 (327)
Q Consensus 156 iN~~~~~-~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~g~~v~ivi~N~~--~~~HP~HLHG~ 228 (327)
|||++|. ++..|+|.+.+.+. ...|. ..+++.++ .|++|||+|+|.+ ...||||||||
T Consensus 406 iN~~s~~~~~~~P~L~~~~~g~---------~~~~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh 470 (580)
T 3sqr_A 406 INSSSLLLDWSSPTTLKIFNNE---------TIFPT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGH 470 (580)
T ss_dssp ETTBCCCCCTTSCHHHHHHTTC---------CCCCG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSC
T ss_pred ECCEecccCCCCCchhhhhcCC---------ccCCC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCc
Confidence 9999997 57889876543211 01121 23455665 6999999999988 78999999999
Q ss_pred CeEEEEeccCCCCccc-cccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCccccc
Q 020366 229 DFWVVGYGSGQWAAEK-RRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLA 307 (327)
Q Consensus 229 ~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~ 307 (327)
+||||++|.|.|+++. ...+|+.||++|||+.|+++||++|||++||||+|+|||||++|+.+||+++|.+ ++ +.++
T Consensus 471 ~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~-~~i~ 548 (580)
T 3sqr_A 471 DFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQ-SSIA 548 (580)
T ss_dssp CEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SG-GGCC
T ss_pred eEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CH-HHHh
Confidence 9999999999998653 3578999999999999999999999999999999999999999999999999975 33 3343
Q ss_pred ccCCCCCchh-hccccC
Q 020366 308 NEYDIPSNIL-VCGKAV 323 (327)
Q Consensus 308 ~~~~~P~~~~-~C~~~~ 323 (327)
+..++|+++. .|.+|.
T Consensus 549 ~~~~~~~~~~~~C~~~~ 565 (580)
T 3sqr_A 549 VKMTDTAIFEDTCANWN 565 (580)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred hccCCcHHHHHhhHHHh
Confidence 3234777765 897663
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.8e-58 Score=449.08 Aligned_cols=290 Identities=21% Similarity=0.295 Sum_probs=211.8
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCC---ceeE
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNV---LTAT 77 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~---~~~~ 77 (327)
||||||+|+.+.+.|+||||+|+|||+||.+++|+.+++|.|++||||||||+++++.|+||||+........ ....
T Consensus 197 RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ 276 (499)
T 3pxl_A 197 RFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINS 276 (499)
T ss_dssp EEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTE
T ss_pred EEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceE
Confidence 8999999999999999999999999999999999999999999999999999999877899999986532211 2357
Q ss_pred EEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEc
Q 020366 78 AILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVN 157 (327)
Q Consensus 78 ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN 157 (327)
|+|+|.++....+...+..+... +. +.+|.|..+.+.|... ....+++++.+...+ ++ ..|+||
T Consensus 277 ail~Y~~~~~~~p~~~~~~~~~~-------~~--~~~L~p~~~~~~p~~~---~~~~~d~~~~l~~~~---~~-~~w~iN 340 (499)
T 3pxl_A 277 AILRYDGAPAVEPTTNQTTSVKP-------LN--EVDLHPLVSTPVPGAP---SSGGVDKAINMAFNF---NG-SNFFIN 340 (499)
T ss_dssp EEEEETTSCSSCCCCCCCCCSSB-------CC--GGGCCBSSCCCCSSCS---STTCSSEEEECCEEE---CS-SCEEET
T ss_pred EEEEeCCCCCCCCCCCCCCCCcc-------cc--cccccccccccCCCcc---cCCCCcEEEEEEEEe---cC-cEEEEc
Confidence 99999876421110000000011 00 1234444322222110 012356676655422 12 279999
Q ss_pred CccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEE---eCCCCcCceeecCCCeEEEE
Q 020366 158 GISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQ---NNEKTMQSWHLDGYDFWVVG 234 (327)
Q Consensus 158 ~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~---N~~~~~HP~HLHG~~F~Vl~ 234 (327)
|++|..++.|+|.+.+. |.+.... .....+++.++.|++|||+|+ |...+.||||||||+||||+
T Consensus 341 g~s~~~~~~P~L~~~~~---g~~~~~~---------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~ 408 (499)
T 3pxl_A 341 GASFVPPTVPVLLQILS---GAQTAQD---------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVR 408 (499)
T ss_dssp TBCCCCCSSCHHHHHHT---TCCSTTT---------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEE
T ss_pred CEecCCCCCchhhhhhc---CCccccc---------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEe
Confidence 99999999998876532 2211110 011246789999999999999 56678999999999999998
Q ss_pred eccCCCCccccccCCCCCCCceeeEEeCC---CCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCC
Q 020366 235 YGSGQWAAEKRRTYNLADTLTRHTAQVYP---QSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYD 311 (327)
Q Consensus 235 ~g~G~~~~~~~~~~n~~~p~~rDTv~vp~---~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~ 311 (327)
.+ | ...+|+.||+||||+.|++ +||++|||+|||||.|||||||++|+.+||+++|. .. .+.+++...
T Consensus 409 ~~-g------~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~-e~-~~~~~~~~~ 479 (499)
T 3pxl_A 409 SA-G------STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-ED-TPDVKAVNP 479 (499)
T ss_dssp CT-T------CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEE-ES-GGGHHHHSC
T ss_pred cc-C------CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEE-EC-hhHhccccC
Confidence 75 3 2357889999999999997 99999999999999999999999999999998884 33 344543456
Q ss_pred CCCchh-hccccCCCCC
Q 020366 312 IPSNIL-VCGKAVGHHP 327 (327)
Q Consensus 312 ~P~~~~-~C~~~~~~~~ 327 (327)
+|+++. .|.+|...++
T Consensus 480 ~p~~~~~~C~~~~~~~~ 496 (499)
T 3pxl_A 480 VPQAWSDLCPTYDALDP 496 (499)
T ss_dssp CCHHHHTHHHHHHTSCG
T ss_pred CCHHHHHhhhHhhccCc
Confidence 787765 9998877653
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=3.1e-58 Score=448.68 Aligned_cols=287 Identities=20% Similarity=0.252 Sum_probs=209.1
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCC---ceeE
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNV---LTAT 77 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~---~~~~ 77 (327)
||||||+|+.+.+.|+||||+|+|||+||.+++|+.+++|.|++||||||||+++++.|+||||+........ ....
T Consensus 200 RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ 279 (495)
T 3t6v_A 200 RMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINS 279 (495)
T ss_dssp EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTE
T ss_pred EEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceE
Confidence 8999999999999999999999999999999999999999999999999999999887899999986532211 2347
Q ss_pred EEEEecCCCCCCCC-CCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEE
Q 020366 78 AILHYTNSHSPASG-PLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAV 156 (327)
Q Consensus 78 ail~y~~~~~~~~~-~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i 156 (327)
|||+|.++....+. ..+..+..+ +. +.+|.|..+.+.|... ....+++++.+...+ . + ..|+|
T Consensus 280 ail~Y~~~~~~~p~~~~~~~~~~~-------~~--~~~L~p~~~~~~p~~~---~~~~~d~~~~l~~~~--~-~-~~w~i 343 (495)
T 3t6v_A 280 AILRYDGATTADPVTVASTVHTKC-------LI--ETDLHPLSRNGVPGNP---HQGGADCNLNLSLGF--A-C-GNFVI 343 (495)
T ss_dssp EEEEETTSCSSCCCCCCCSSCSSB-------CC--GGGCCBSSCCCCSSCS---STTCSSEEEECCEEE--E-T-TEEEE
T ss_pred EEEEECCCCCCCCCCCCCCCCccc-------cc--cccccccccccCCCcc---CCCCCcEEEEEEEEe--c-C-cEEEE
Confidence 99999875421110 000001011 00 1234444322222100 011356666654422 1 2 27999
Q ss_pred cCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEE-eCCCCcCceeecCCCeEEEEe
Q 020366 157 NGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQ-NNEKTMQSWHLDGYDFWVVGY 235 (327)
Q Consensus 157 N~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~-N~~~~~HP~HLHG~~F~Vl~~ 235 (327)
||++|..++.|+|.+.+. |.+.... .....+++.++.|++|||+|+ |.....||||||||+|+||++
T Consensus 344 Ng~s~~~~~~P~L~~~~~---g~~~~~~---------~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~ 411 (495)
T 3t6v_A 344 NGVSFTPPTVPVLLQICS---GANTAAD---------LLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSES 411 (495)
T ss_dssp TTBCCCCCSSCHHHHHHT---TCCSSTT---------SSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEEC
T ss_pred cCEecCCCCCcchhhhhc---CCcCccc---------ccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEec
Confidence 999999989998866532 2221110 011245789999999999998 667789999999999999987
Q ss_pred ccCCCCccccccCCCCCCCceeeEEeCC-CCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCCCCC
Q 020366 236 GSGQWAAEKRRTYNLADTLTRHTAQVYP-QSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPS 314 (327)
Q Consensus 236 g~G~~~~~~~~~~n~~~p~~rDTv~vp~-~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~ 314 (327)
+ | ...+|+.||+||||+.|++ +||++|||+|||||.|||||||++|+++||+++|. ..+ +.+++..++|+
T Consensus 412 ~-g------~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~-e~~-~~~~~~~~~p~ 482 (495)
T 3t6v_A 412 A-S------NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFA-EDI-PNTASANPVPE 482 (495)
T ss_dssp T-T------CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEE-ETH-HHHHHHCCCCH
T ss_pred C-C------CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEE-ECh-hHhccccCCCH
Confidence 5 3 1357889999999999997 89999999999999999999999999999998884 333 44433356787
Q ss_pred chh-hccccCC
Q 020366 315 NIL-VCGKAVG 324 (327)
Q Consensus 315 ~~~-~C~~~~~ 324 (327)
++. .|.+|..
T Consensus 483 ~~~~~C~~~~~ 493 (495)
T 3t6v_A 483 AWSNLCPSYDS 493 (495)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhhHhhc
Confidence 765 9987753
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-58 Score=450.74 Aligned_cols=291 Identities=24% Similarity=0.296 Sum_probs=212.0
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCC-CCceEEEEEeccc-------CC
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQP-PKDYYIVASTRFT-------KN 72 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~-~~~y~ir~~~~~~-------~~ 72 (327)
||||||+|+.+.+.|+||||+|+|||+||++++|+.+++|.|++||||||||++++. .++|||++..... ..
T Consensus 189 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~ 268 (534)
T 1zpu_A 189 LLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDL 268 (534)
T ss_dssp EEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTC
T ss_pred EEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCC
Confidence 899999999999999999999999999999999999999999999999999999864 5789999976422 12
Q ss_pred CceeEEEEEecCCCCCCCCCCCCCCC-Ccccccccc-cccccccccccCCCCCCCCCCCCCCcCceEEEEEecccc-ccC
Q 020366 73 VLTATAILHYTNSHSPASGPLPTGPT-YEIHWSMKQ-ARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAP-LIN 149 (327)
Q Consensus 73 ~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~-~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 149 (327)
.....++|+|.++.. .|..+. .. +.. +.+ ..|.|....+.+ ..+++++.+...+. ..+
T Consensus 269 ~~~~~ail~y~~~~~-----~p~~~~~~~----~~~~~~~--~~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~ 329 (534)
T 1zpu_A 269 QLNATSYMVYNKTAA-----LPTQNYVDS----IDNFLDD--FYLQPYEKEAIY--------GEPDHVITVDVVMDNLKN 329 (534)
T ss_dssp CCEEEEEEESCTTSC-----BCCCCCCSC----SSCSCCG--GGCCBSSCCCCC--------CSCSEEEEEEEEEEECTT
T ss_pred CcceEEEEEeCCCCC-----CCCCCcccc----ccccccc--ccceeCCCCCCC--------CCCCeEEEEEEEeeccCC
Confidence 356789999987531 111110 01 111 111 123333222221 23567777765432 134
Q ss_pred CeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCC
Q 020366 150 GKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 150 g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
+...|+|||++|..++.|+|.+.+. .+.+.. .+. ..+.+++++.++.|++|+|+|+|.+.+.||||||||+
T Consensus 330 ~~~~~~iNg~s~~~~~~P~L~~~~~--~~~~~~-----~~~--~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~ 400 (534)
T 1zpu_A 330 GVNYAFFNNITYTAPKVPTLMTVLS--SGDQAN-----NSE--IYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHA 400 (534)
T ss_dssp SCEEEEETTBCCCCCSSCHHHHHTT--SGGGTT-----CGG--GGCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCC
T ss_pred ceeEEEECCCcccCCCCCceeeecc--cCcccC-----CCc--ccCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCc
Confidence 5568999999999999998865432 111110 111 0112356789999999999999999999999999999
Q ss_pred eEEEEeccC----------CCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366 230 FWVVGYGSG----------QWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 230 F~Vl~~g~G----------~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v 299 (327)
||||+++.| .|+...... +..+|+|||||.|+++||++|||+|||||.|||||||++|+++|||++|.+
T Consensus 401 F~Vl~~~~~~~~~~~G~p~~~~~~~~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~ 479 (534)
T 1zpu_A 401 FQTIQRDRTYDDALGEVPHSFDPDNHPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVE 479 (534)
T ss_dssp EEEEEECCCCCGGGTCCCCCCBTTBCCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEE
T ss_pred eEEEeecCCccccccCcccccCcccccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEE
Confidence 999999864 444332222 246899999999999999999999999999999999999999999999976
Q ss_pred EcCccccccc--CCCCCchh-hcccc
Q 020366 300 WNAVHSLANE--YDIPSNIL-VCGKA 322 (327)
Q Consensus 300 ~~~~~~~~~~--~~~P~~~~-~C~~~ 322 (327)
. + +.+++. .++|+++. .|.++
T Consensus 480 ~-~-~~~~~~~~~~~p~~~~~~C~~~ 503 (534)
T 1zpu_A 480 D-P-FGIQDAHSQQLSENHLEVCQSC 503 (534)
T ss_dssp C-H-HHHHHCGGGSCCHHHHHHHHHT
T ss_pred C-c-cccccccccCCChhHhhhhhcc
Confidence 4 2 234333 56787765 66444
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.1e-56 Score=441.36 Aligned_cols=288 Identities=20% Similarity=0.258 Sum_probs=209.5
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCC---CceeE
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKN---VLTAT 77 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~---~~~~~ 77 (327)
||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|++++++|+|||++....... .....
T Consensus 223 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ 302 (521)
T 1v10_A 223 RFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINS 302 (521)
T ss_dssp EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTE
T ss_pred EEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCcee
Confidence 899999999999999999999999999999999999999999999999999999987789999998653211 11236
Q ss_pred EEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEc
Q 020366 78 AILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVN 157 (327)
Q Consensus 78 ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN 157 (327)
|+|+|.+.....+...+. +..+++ +.+|.+....+.|... .....++++.+...+ .++...|+||
T Consensus 303 ail~y~~~~~~~p~~~~~-~~~~~~---------~~~l~p~~~~~~p~~~---~~~~~~~~~~l~~~~--~~~~~~~~iN 367 (521)
T 1v10_A 303 AIFRYQGAAVAEPTTSQN-SGTALN---------EANLIPLINPGAPGNP---VPGGADINLNLRIGR--NATTADFTIN 367 (521)
T ss_dssp EEEEETTCCSCCCCCCCC-CSCBCC---------GGGCCBSSCCCCSSCS---STTCSSEEEECCEEC--CSSSSCCEES
T ss_pred EEEEECCCCCCCCCCCCC-cccccc---------hhhcccCCcccCCCcc---cCCcceEEEEEEEec--CCceeEEEEC
Confidence 999998764211111000 001110 0123333222222210 011345555554321 1122379999
Q ss_pred CccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEecc
Q 020366 158 GISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGS 237 (327)
Q Consensus 158 ~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~ 237 (327)
|++|..++.|+|.+.+. |.++.. ..+.+++++.++.|++|||+++| .+.||||||||+||||+++.
T Consensus 368 g~~~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~ 433 (521)
T 1v10_A 368 GAPFIPPTVPVLLQILS---GVTNPN---------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPG 433 (521)
T ss_dssp SCCCCCCSSCHHHHHHH---TCCCGG---------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTT
T ss_pred CCcccCCCCchhhhhhc---CCcccc---------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCC
Confidence 99999888888765431 111100 11124567899999999999999 78999999999999999985
Q ss_pred CCCCccccccCCCCCCCceeeEEe-CCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCCCCCc-
Q 020366 238 GQWAAEKRRTYNLADTLTRHTAQV-YPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSN- 315 (327)
Q Consensus 238 G~~~~~~~~~~n~~~p~~rDTv~v-p~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~~- 315 (327)
|. .+|+.+|+|||||.| +++||++|||+|||||.|||||||++|+++|||++|.+.. .+ +++..++|+.
T Consensus 434 ~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~-~~-~~~~~~~p~~~ 504 (521)
T 1v10_A 434 SS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDI-PN-IPIANAISPAW 504 (521)
T ss_dssp CS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESG-GG-HHHHSCCCHHH
T ss_pred CC-------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECC-cc-hhhccCCChHH
Confidence 52 467889999999999 8999999999999999999999999999999999998753 22 3334556755
Q ss_pred hhhccccCCCC
Q 020366 316 ILVCGKAVGHH 326 (327)
Q Consensus 316 ~~~C~~~~~~~ 326 (327)
.+.|.+|....
T Consensus 505 ~~~C~~~~~~~ 515 (521)
T 1v10_A 505 DDLCPKYNANN 515 (521)
T ss_dssp HTHHHHHTTCC
T ss_pred hhhchhhhccC
Confidence 56999887753
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=3.1e-56 Score=436.79 Aligned_cols=288 Identities=22% Similarity=0.308 Sum_probs=208.7
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCC-------C
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKN-------V 73 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~-------~ 73 (327)
||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|++++++|+|||++....... .
T Consensus 196 RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ 275 (503)
T 1hfu_A 196 RMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFAN 275 (503)
T ss_dssp EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGG
T ss_pred EEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCC
Confidence 899999999999999999999999999999999999999999999999999999987789999998653211 1
Q ss_pred ceeEEEEEecCCCCCCCCCCCCCCC-CcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeE
Q 020366 74 LTATAILHYTNSHSPASGPLPTGPT-YEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKL 152 (327)
Q Consensus 74 ~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 152 (327)
....++|+|.+.....+. .+..|. .+++ ..+|.+....+.|.... ....++++.+.... ++.
T Consensus 276 ~~~~ail~y~~~~~~~p~-~~~~~~~~~l~---------~~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~~---~~~- 338 (503)
T 1hfu_A 276 GVNSAILRYAGAANADPT-TSANPNPAQLN---------EADLHALIDPAAPGIPT---PGAADVNLRFQLGF---SGG- 338 (503)
T ss_dssp GTTEEEEEETTSCSSCCC-CCCCSSCCBCC---------GGGCBBSSSCSCSSCSS---TTCSSEEEECCEEE---ETT-
T ss_pred CceEEEEEECCCCCCCCC-CCCCCccCCCc---------cccccccCccCCCCccc---CCcceEEEEEEeec---cCc-
Confidence 123699999876421110 000111 1111 01233332222222100 01234555443211 122
Q ss_pred EEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEe-CCCCcCceeecCCCeE
Q 020366 153 RYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQN-NEKTMQSWHLDGYDFW 231 (327)
Q Consensus 153 ~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N-~~~~~HP~HLHG~~F~ 231 (327)
.|+|||++|..++.|+|.+.+. |.++.. ..+.+++++.++.|++|||+++| ...+.||||||||+|+
T Consensus 339 ~~~iNg~~~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~ 406 (503)
T 1hfu_A 339 RFTINGTAYESPSVPTLLQIMS---GAQSAN---------DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFS 406 (503)
T ss_dssp EEEETTBCCCCCSSCHHHHHHT---TCCSGG---------GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEE
T ss_pred eEEECCCccCCCCCcchhhhhc---CCcccc---------cCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEE
Confidence 7999999999888888765432 211100 11224577899999999999995 5578999999999999
Q ss_pred EEEeccCCCCccccccCCCCCCCceeeEEe-CCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccC
Q 020366 232 VVGYGSGQWAAEKRRTYNLADTLTRHTAQV-YPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEY 310 (327)
Q Consensus 232 Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v-p~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~ 310 (327)
||+++.|. .+|+.+|+|||||.| +++||++|||+|||||.|||||||++|+++|||++|.+... + +++..
T Consensus 407 Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~-~-~~~~~ 477 (503)
T 1hfu_A 407 VVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMA-N-TVDAN 477 (503)
T ss_dssp EEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHH-H-HHHHC
T ss_pred EEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECch-h-hhhcc
Confidence 99998552 467889999999999 99999999999999999999999999999999999987532 2 32335
Q ss_pred CCCCc-hhhccccCCCC
Q 020366 311 DIPSN-ILVCGKAVGHH 326 (327)
Q Consensus 311 ~~P~~-~~~C~~~~~~~ 326 (327)
++|++ .+.|.+|...+
T Consensus 478 ~~p~~~~~~C~~~~~~~ 494 (503)
T 1hfu_A 478 NPPVEWAQLCEIYDDLP 494 (503)
T ss_dssp CCCHHHHHHHHHHHTCC
T ss_pred CCChHHhhhccchhhcC
Confidence 56755 56999887643
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=4.4e-56 Score=440.38 Aligned_cols=295 Identities=20% Similarity=0.262 Sum_probs=209.6
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe--cc-c--CCCce
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST--RF-T--KNVLT 75 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~--~~-~--~~~~~ 75 (327)
||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||||++++++|+||||+.. .. + .....
T Consensus 226 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ 305 (559)
T 2q9o_A 226 RLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPH 305 (559)
T ss_dssp EEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSC
T ss_pred EEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCc
Confidence 8999999999999999999999999999999999999999999999999999999877899999986 31 1 12335
Q ss_pred eEEEEEecCCCCCCCCCCCCCCC-CcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEE
Q 020366 76 ATAILHYTNSHSPASGPLPTGPT-YEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRY 154 (327)
Q Consensus 76 ~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 154 (327)
..|+|+|.+.... +|..+. ...+ ..|.+. ..|.|..+.+.|.... ....++++.+.... ...+...|
T Consensus 306 ~~ail~y~~~~~~----~P~~~~~~~~~---~~~~~~-~~l~p~~~~~~p~~~~---~~~~~~~~~~~~~~-~~~~~~~~ 373 (559)
T 2q9o_A 306 PAAIFHYAGAPGG----LPTDEGTPPVD---HQCLDT-LDVRPVVPRSVPVNSF---VKRPDNTLPVALDL-TGTPLFVW 373 (559)
T ss_dssp CEEEEEETTSCCS----CCCCCCCCCCC---CTTCCC-SCCCBSSCCBCCCTTC---CCCGGGEEEEEEEC-SSSSSCEE
T ss_pred eeEEEEECCCCCC----CCCCCCCcCCC---cccccc-cccccCCCCCCCCccc---ccceeEEEEEEeec-CCCceEEE
Confidence 6899999875421 111110 0000 001111 1233332222222110 01123344443211 12345689
Q ss_pred EEcCccCcC-CCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecC-CcEEEEEEEeCC----CCcCceeecCC
Q 020366 155 AVNGISYVN-SDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNL-HEYIEVVFQNNE----KTMQSWHLDGY 228 (327)
Q Consensus 155 ~iN~~~~~~-~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-g~~v~ivi~N~~----~~~HP~HLHG~ 228 (327)
+|||++|.. +..|+|.+...+.. ..| .+.+++.++. ++|++|+|+|.+ .+.||||||||
T Consensus 374 ~iNg~s~~~~~~~P~L~~~~~g~~---------~~~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh 438 (559)
T 2q9o_A 374 KVNGSDINVDWGKPIIDYILTGNT---------SYP------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGH 438 (559)
T ss_dssp EETTBCCCCCTTSCHHHHHHHTCC---------CCC------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSS
T ss_pred EECCEecccCCCCCcHhHhhcCCc---------cCC------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCC
Confidence 999999974 57787754321110 011 2456677765 578888999976 78999999999
Q ss_pred CeEEEEecc---------CCCCcc-ccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEE
Q 020366 229 DFWVVGYGS---------GQWAAE-KRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLK 298 (327)
Q Consensus 229 ~F~Vl~~g~---------G~~~~~-~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~ 298 (327)
+||||++|. |.|++. ....+|+.+|+|||||.|+++||++|||+|||||.|||||||++|+++|||++|.
T Consensus 439 ~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~ 518 (559)
T 2q9o_A 439 DFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFL 518 (559)
T ss_dssp CEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEE
T ss_pred ceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEE
Confidence 999999997 778753 1346789999999999999999999999999999999999999999999999997
Q ss_pred EEcCcccccccCCC--CCch-hhccccCC
Q 020366 299 VWNAVHSLANEYDI--PSNI-LVCGKAVG 324 (327)
Q Consensus 299 v~~~~~~~~~~~~~--P~~~-~~C~~~~~ 324 (327)
+. +++ +++..++ |+++ ++|.+|..
T Consensus 519 v~-~~~-~~~~~~~~~p~~~~~~C~~~~~ 545 (559)
T 2q9o_A 519 ER-PAD-LRQRISQEDEDDFNRVCDEWRA 545 (559)
T ss_dssp EC-HHH-HGGGCCHHHHHHHHHHHHHHHH
T ss_pred EC-cch-hhhccccCCchhhhhhcccccc
Confidence 74 223 3333444 6654 69987753
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.3e-51 Score=397.94 Aligned_cols=223 Identities=19% Similarity=0.221 Sum_probs=177.0
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC--------
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-------- 71 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-------- 71 (327)
||||||+|+.+.+.|+|+||+|+|||+||+++ +|+.+++|.|++||||||+|++++ +|+|||++......
T Consensus 198 RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~ 276 (439)
T 2xu9_A 198 RLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMG 276 (439)
T ss_dssp EEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSS
T ss_pred EEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccc
Confidence 89999999999999999999999999999997 899999999999999999999998 68899998643211
Q ss_pred ----------CCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEE
Q 020366 72 ----------NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVL 141 (327)
Q Consensus 72 ----------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~ 141 (327)
......++|+|.+... +.++|. .+.+....+.+ ..++++.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~p~------------------~l~~~~~l~~~---------~~~r~~~l 327 (439)
T 2xu9_A 277 GMAHAMPQGPSRPETLLYLIAPKNPK--PLPLPK------------------ALSPFPTLPAP---------VVTRRLVL 327 (439)
T ss_dssp SCCEEEECCSCCCEEEEEEEECSSCC--CCCCCS------------------CCCCCCCCCCC---------SEEEEEEE
T ss_pred cccccccCCCCCcceeEEEEecCCCc--cccCcc------------------cCCCcccCCCC---------CcceEEEE
Confidence 1125678899976531 112221 11111111111 23477777
Q ss_pred eccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcC
Q 020366 142 ANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQ 221 (327)
Q Consensus 142 ~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~H 221 (327)
...+ .+ ..|+|||++|..+..+ +.++.|++++|+|+|.+.+.|
T Consensus 328 ~~~~---~g-~~~~iNg~~~~~~~~~---------------------------------~~~~~g~~~~~~~~N~~~~~H 370 (439)
T 2xu9_A 328 TEDM---MA-ARFFINGQVFDHRRVD---------------------------------LKGQAQTVEVWEVENQGDMDH 370 (439)
T ss_dssp EEEG---GG-TEEEETTBCCCTTCCC---------------------------------EEECTTCEEEEEEEECSSSCE
T ss_pred Eeec---cC-ceEeECCEECCCCCCc---------------------------------eecCCCCEEEEEEEcCCCCCC
Confidence 6532 11 3799999999742211 467899999999999999999
Q ss_pred ceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366 222 SWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 222 P~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
|||||||+||||+++.+. +.+|+|||||.|+++||++|||++||||.|||||||++|++.|||+.++|+
T Consensus 371 P~HLHG~~F~Vl~~~g~~----------~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 371 PFHLHVHPFQVLSVGGRP----------FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EEEESSCCBEEEEETTEE----------CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CceeCCCcEEEEeeCCCC----------CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 999999999999998542 346999999999999999999999999999999999999999999999874
No 10
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=2.4e-49 Score=389.49 Aligned_cols=239 Identities=13% Similarity=0.125 Sum_probs=178.2
Q ss_pred CeeEEecCCCcEEEEEEeC-------CeEEEEEecCcc-ceeeEeeEEEEcCCceEEEEEEeCCCCC-ceEEEEEec--c
Q 020366 1 MFRISNVGLSTSFNFRIQG-------HTMKLVEVEGSH-TIQNIYDSLDVHVGQSVSVLVTLNQPPK-DYYIVASTR--F 69 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidg-------h~l~VIa~DG~~-v~P~~v~~l~l~~GqRydvlv~~~~~~~-~y~ir~~~~--~ 69 (327)
||||||+|+.+.|.|+|++ |+|+|||+||++ ++|+.+++|.|++||||||||++++.+| +|||++... .
T Consensus 222 RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~ 301 (534)
T 3abg_A 222 RFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIG 301 (534)
T ss_dssp EEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSS
T ss_pred EEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEecccccc
Confidence 8999999999999999987 999999999985 6899999999999999999999998555 699998531 1
Q ss_pred c----CCCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccc
Q 020366 70 T----KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSA 145 (327)
Q Consensus 70 ~----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 145 (327)
+ .......++|+|.....+........| ..|.+.. .+.+. ...++++.+...
T Consensus 302 ~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P---------------~~L~~~~-~p~~~-------~~~~~~~~~~~~- 357 (534)
T 3abg_A 302 GIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP---------------ANLRDVP-FPSPT-------TNTPRQFRFGRT- 357 (534)
T ss_dssp SCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC---------------CCCCCCS-CCCCC-------CCCCEEEECSCC-
T ss_pred ccccccCcCCcceeEEEecCCCCcCCCCCCCc---------------cccccCC-CCCCc-------cccceEEEEecc-
Confidence 1 111245689999754321000000001 1122211 01111 134666665421
Q ss_pred cccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCC-CcCcee
Q 020366 146 PLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEK-TMQSWH 224 (327)
Q Consensus 146 ~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~H 224 (327)
+ ..|+|||++|..+..|++ +.++.|++++|+|+|.+. +.||||
T Consensus 358 ---~--~~w~iNG~~f~~~~~p~l-------------------------------~~v~~G~~~~w~i~N~~~~~~HP~H 401 (534)
T 3abg_A 358 ---G--PTWTINGVAFADVQNRLL-------------------------------ANVPVGTVERWELINAGNGWTHPIH 401 (534)
T ss_dssp ---C--STTCCCCBTTBCTTSCCC-------------------------------CEECTTCEEEEEEEECSSSCCCCEE
T ss_pred ---C--ceeEECCcccCCCCCcce-------------------------------eeccCCCEEEEEEEcCCCCCCcCEE
Confidence 1 269999999976544432 246789999999999874 699999
Q ss_pred ecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEE-ecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366 225 LDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVS-LDNQGMWNMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 225 LHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~-adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
||||+|+||+++.|.+.. ..+++++ .|||||.|++++|++|||+ +||||.|||||||++|++.|||+.|.|...+
T Consensus 402 LHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 402 IHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp ESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred ECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 999999999997664421 1345566 8999999999999999998 9999999999999999999999999987543
No 11
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.5e-47 Score=376.04 Aligned_cols=242 Identities=12% Similarity=0.136 Sum_probs=172.8
Q ss_pred CeeEEecCCCcEEEEEEeCC-eEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEec-cc--C-CCc
Q 020366 1 MFRISNVGLSTSFNFRIQGH-TMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR-FT--K-NVL 74 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh-~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~-~~--~-~~~ 74 (327)
||||||+|+.+.+.|+|+|| +|+|||+||+++ +|+.+++|.|++||||||||++++.+|. |+++... .+ . ...
T Consensus 251 RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~-~~~l~~~~~~~~~~~~~ 329 (513)
T 2wsd_A 251 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGE-SIILANSAGCGGDVNPE 329 (513)
T ss_dssp EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTC-EEEEEECCCSSSSCCTT
T ss_pred EEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCc-EEEEEecccccccCCCC
Confidence 89999999999999999999 999999999998 8999999999999999999999985565 3333322 11 1 112
Q ss_pred eeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEE
Q 020366 75 TATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRY 154 (327)
Q Consensus 75 ~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 154 (327)
...++|+|..............|. .|.+....+.. ....++++.+...+. ..|...|
T Consensus 330 ~~~~il~~~~~~~~~~~~~~~~p~---------------~l~~~~~~~~~-------~~~~~~~~~l~~~~~-~~g~~~~ 386 (513)
T 2wsd_A 330 TDANIMQFRVTKPLAQKDESRKPK---------------YLASYPSVQHE-------RIQNIRTLKLAGTQD-EYGRPVL 386 (513)
T ss_dssp TTTEEEEEECCSCCSSCCCCCCCS---------------BCSCCGGGCCC-------CEEEEEEEEEEEEEC-TTSCEEE
T ss_pred CCcceEEEEeccCcccCccCCCCc---------------cccCCCCcccC-------CCcceEEEEEEeecC-CCCCceE
Confidence 345889997543111000001111 01110000100 113456666654322 2345679
Q ss_pred EEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEE
Q 020366 155 AVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVG 234 (327)
Q Consensus 155 ~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~ 234 (327)
+|||++|..+. .+.++.|++++|+|+|.+.+.||||||||+||||+
T Consensus 387 ~iNg~~~~~~~----------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~ 432 (513)
T 2wsd_A 387 LLNNKRWHDPV----------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLD 432 (513)
T ss_dssp EETTBCTTSCC----------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEE
T ss_pred eECCccCCCcc----------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEE
Confidence 99999986421 02457899999999999999999999999999999
Q ss_pred eccC---CCCccccccCCCCC---------CCceeeEEeCCCCEEEEEEEe-cCCeeeEEEeeehhhhccCceEEEEEEc
Q 020366 235 YGSG---QWAAEKRRTYNLAD---------TLTRHTAQVYPQSWTVILVSL-DNQGMWNMRSAIWERQYLGQQFYLKVWN 301 (327)
Q Consensus 235 ~g~G---~~~~~~~~~~n~~~---------p~~rDTv~vp~~g~~virf~a-dnpG~W~~HCHi~~h~~~Gm~~~~~v~~ 301 (327)
++.+ .|+.. ..+|+.+ +.|||||.|+++++++|+|++ ||||.|||||||++|++.|||+.++|..
T Consensus 433 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 433 RRPFDIARYQES--GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp EEEBCHHHHHHH--CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred ecCccccccccc--ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 9742 22211 1223333 469999999999999998888 8999999999999999999999999875
Q ss_pred C
Q 020366 302 A 302 (327)
Q Consensus 302 ~ 302 (327)
+
T Consensus 511 ~ 511 (513)
T 2wsd_A 511 P 511 (513)
T ss_dssp C
T ss_pred C
Confidence 4
No 12
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.9e-47 Score=368.34 Aligned_cols=223 Identities=15% Similarity=0.171 Sum_probs=169.2
Q ss_pred CeeEEecCCCcEEEEEE-eCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc--------
Q 020366 1 MFRISNVGLSTSFNFRI-QGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT-------- 70 (327)
Q Consensus 1 RlRliNa~~~~~~~~si-dgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~-------- 70 (327)
||||||+|+.+.+.|+| |||+|+|||+||+++ +|+.+++|.|++||||||+|++++ +++|||++.....
T Consensus 203 RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~ 281 (451)
T 2uxt_A 203 RLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGF 281 (451)
T ss_dssp EEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT-CCCEEEEC-------------
T ss_pred EEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccc
Confidence 89999999999999999 899999999999997 899999999999999999999996 5789999865321
Q ss_pred ---CCCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccc
Q 020366 71 ---KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPL 147 (327)
Q Consensus 71 ---~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 147 (327)
.......++|+|........ .....| ..|.+....+. ....++++.+.
T Consensus 282 ~~~~~~~~~~~il~~~~~~~~~~-~~~~~p---------------~~L~~~~~~~~--------~~~~~~~~~l~----- 332 (451)
T 2uxt_A 282 FEPSSILVSTLVLTLRPTGLLPL-VTDSLP---------------MRLLPTEIMAG--------SPIRSRDISLG----- 332 (451)
T ss_dssp ---CCCCSCCEEEEEEECSCCC-----CCC---------------SCSSSSCCCCC--------CCSEEEEEEEC-----
T ss_pred cccCCCCCCcceEEEEecCCCcC-ccccCc---------------cccCCCCCCCC--------CCcceEEEEEe-----
Confidence 01123467888875431110 000011 11222211111 12345666553
Q ss_pred cCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecC
Q 020366 148 INGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDG 227 (327)
Q Consensus 148 ~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG 227 (327)
+ .|+|||++|..++. .+.++.|++++|+|+|. +.|||||||
T Consensus 333 --~--~~~iNg~~f~~~~~---------------------------------~~~~~~G~~~~~~l~N~--~~HP~HLHG 373 (451)
T 2uxt_A 333 --D--DPGINGQLWDVNRI---------------------------------DVTAQQGTWERWTVRAD--EPQAFHIEG 373 (451)
T ss_dssp --S--SSSBTTBCCCTTCC---------------------------------CEEEETTCEEEEEEEEE--EEEEEEETT
T ss_pred --e--EEEECCEeCCCCCC---------------------------------cEEcCCCCEEEEEEECC--CCcCeEECC
Confidence 1 58999999874211 14678999999999998 799999999
Q ss_pred CCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee----eEEEeeehhhhccCceEEEEEEcC
Q 020366 228 YDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM----WNMRSAIWERQYLGQQFYLKVWNA 302 (327)
Q Consensus 228 ~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~----W~~HCHi~~h~~~Gm~~~~~v~~~ 302 (327)
|+|+||+++ |. .+++.+|.|||||.| +++++|+|++||||. |||||||++|++.|||+.|.|...
T Consensus 374 h~F~Vl~~~-G~-------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~ 442 (451)
T 2uxt_A 374 VMFQIRNVN-GA-------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPV 442 (451)
T ss_dssp CEEEEEEET-TB-------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECS
T ss_pred ceEEEEeeC-Cc-------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccC
Confidence 999999997 42 245667999999999 899999999999988 999999999999999999998754
No 13
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2e-46 Score=376.14 Aligned_cols=261 Identities=11% Similarity=0.073 Sum_probs=162.9
Q ss_pred CeeEEecCCCcEEEEEEeCCe-------EEEEEecCccc-eeeEee------EEEEcCCceEEEEEEeCCCCCceEEEEE
Q 020366 1 MFRISNVGLSTSFNFRIQGHT-------MKLVEVEGSHT-IQNIYD------SLDVHVGQSVSVLVTLNQPPKDYYIVAS 66 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~-------l~VIa~DG~~v-~P~~v~------~l~l~~GqRydvlv~~~~~~~~y~ir~~ 66 (327)
||||||+|+.+.|.|+|++|+ |+|||+||+++ +|++++ +|.|++||||||||++++..+.++....
T Consensus 275 RlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~ 354 (612)
T 3gyr_A 275 RLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVD 354 (612)
T ss_dssp EEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEE
T ss_pred EEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEe
Confidence 899999999999999999994 99999999998 477664 8999999999999999987665444333
Q ss_pred ec-ccC-------CCceeEEEEEecCCCC--CCCCCCCCCCCCcccccccccccccc--cccccCCCCCCCCCCCCCCcC
Q 020366 67 TR-FTK-------NVLTATAILHYTNSHS--PASGPLPTGPTYEIHWSMKQARTFRW--NLTANAARPNPQGSFHYGKIN 134 (327)
Q Consensus 67 ~~-~~~-------~~~~~~ail~y~~~~~--~~~~~~p~~p~~~~~~~~~~~~~~~~--~l~~~~~~~~p~~~~~~~~~~ 134 (327)
.. ... ......++++|..... +.+..+|........ ... ..++. .+..... +.... ...
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~--~~~~~~~~~~~~~~-~~~~~-----~~~ 425 (612)
T 3gyr_A 355 KGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFR-RMS--HDIPHGHRLIVLTP-PGTKG-----SGG 425 (612)
T ss_dssp CCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCC-CCC--TTSCCEEEEEEEEC-TTCTT-----TTT
T ss_pred cCCcCCcCccCccccccccceeeecccCCCCCCccccccccccccc-ccc--cccccccccccccc-ccccc-----ccc
Confidence 22 111 1123445666653321 111112110000000 000 00000 0000000 00000 000
Q ss_pred ceEEEEEeccc----------------cccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCccee
Q 020366 135 TTRTIVLANSA----------------PLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVAT 198 (327)
Q Consensus 135 ~~~~~~~~~~~----------------~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 198 (327)
......+.... ........|.+|+..|. +.
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~----------------------------------~~ 471 (612)
T 3gyr_A 426 HPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN----------------------------------DG 471 (612)
T ss_dssp CCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT----------------------------------SC
T ss_pred cccccccccccccccccccccceeeeccCCCccccccccCccCC----------------------------------CC
Confidence 00000000000 00001122333333322 12
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc----------------ccccCCCCCCCceeeEEeC
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE----------------KRRTYNLADTLTRHTAQVY 262 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~----------------~~~~~n~~~p~~rDTv~vp 262 (327)
..+.++.|++++|+|+|.+.+.||||||||+||||+++.+.+... .....+..++.|||||.|+
T Consensus 472 ~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~ 551 (612)
T 3gyr_A 472 LGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVP 551 (612)
T ss_dssp CCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEEC
T ss_pred cceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEEC
Confidence 236789999999999999999999999999999999874433211 0123456778999999999
Q ss_pred CCCEEEEEEE-ecCCeeeEEEeeehhhhccCceEEEEEEcCcc
Q 020366 263 PQSWTVILVS-LDNQGMWNMRSAIWERQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 263 ~~g~~virf~-adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~ 304 (327)
++||++|||+ +||||.|||||||++|+++|||+.|+|..++.
T Consensus 552 ~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 552 GPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp SSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred CCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 9999999998 89999999999999999999999999987754
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=9.2e-47 Score=364.37 Aligned_cols=226 Identities=17% Similarity=0.221 Sum_probs=170.4
Q ss_pred CeeEEecCCCcEEEEEE--eC---CeEEEEEecCccce-eeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc--C-
Q 020366 1 MFRISNVGLSTSFNFRI--QG---HTMKLVEVEGSHTI-QNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT--K- 71 (327)
Q Consensus 1 RlRliNa~~~~~~~~si--dg---h~l~VIa~DG~~v~-P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~--~- 71 (327)
||||||+|+.+.+.|+| +| |+|+|||+||++++ |+.+++|.|++||||||+|++++ +.|||++..... .
T Consensus 190 RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~ 267 (448)
T 3aw5_A 190 RLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE--GVYLLKNTPFDPMHLE 267 (448)
T ss_dssp EEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECS--EEEEEEECCCCCCCCT
T ss_pred EEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECCC--CceEEEccccccccCc
Confidence 89999999999999999 99 99999999999998 99999999999999999999983 689999875421 0
Q ss_pred -----------CCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEE
Q 020366 72 -----------NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIV 140 (327)
Q Consensus 72 -----------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 140 (327)
......++|+|.+.... +. |. .|.+.++.+. ....++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-p~---------------~L~~lp~~~~--------~~~~~~~~~ 318 (448)
T 3aw5_A 268 MGHGMQEALPEGSEYTIATFLVEGKGEA-----VP-VE---------------ALSDPPPEPP--------KPTRTRRFA 318 (448)
T ss_dssp TSSCCCCSSCTTSCEEEEEEEEEEECCC-----CC-CC---------------CCSCCCCCCC--------CCSEEEEEE
T ss_pred cccccccccCCCCCceEEEEEEcCCCCC-----CC-cc---------------ccCCCCCCCC--------CCCceEEEE
Confidence 11245677888654311 11 11 0111111011 123567777
Q ss_pred EeccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEE-ecCCcEEEEEEEeCC-C
Q 020366 141 LANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQ-VNLHEYIEVVFQNNE-K 218 (327)
Q Consensus 141 ~~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~g~~v~ivi~N~~-~ 218 (327)
+.... ..|+|||++|... .|+ +. ++.|++|+|+|+|.+ .
T Consensus 319 l~~~~------~~~~iNg~~~~~~-~p~--------------------------------~~~~~~g~~v~~~i~N~~~~ 359 (448)
T 3aw5_A 319 LSLSG------MQWTINGMFWNAS-NPL--------------------------------FEHVSVEGVELWEIVNDKAS 359 (448)
T ss_dssp EEEET------TEEEETTBCCCTT-CTT--------------------------------CCCEEECEEEEEEEEECSSS
T ss_pred EeCCC------ceeeECCCcCCCC-CCc--------------------------------eeccCCCCeEEEEEEcCCCC
Confidence 76421 2599999999742 111 23 678999999999998 8
Q ss_pred CcCceeecCCCeEEEEeccCCCCc-cccccCC----CCCCCceeeEEeCCCCEEEEE--EE---ecCCeeeEEEeeehhh
Q 020366 219 TMQSWHLDGYDFWVVGYGSGQWAA-EKRRTYN----LADTLTRHTAQVYPQSWTVIL--VS---LDNQGMWNMRSAIWER 288 (327)
Q Consensus 219 ~~HP~HLHG~~F~Vl~~g~G~~~~-~~~~~~n----~~~p~~rDTv~vp~~g~~vir--f~---adnpG~W~~HCHi~~h 288 (327)
+.||||||||+||||+++ |.+.. .....+| ..++.|||||.|+++|+++|+ |+ +||| |||||||++|
T Consensus 360 ~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H 436 (448)
T 3aw5_A 360 MPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEH 436 (448)
T ss_dssp CCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHH
T ss_pred CCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHH
Confidence 999999999999999996 65531 1112222 234579999999999999655 99 9999 9999999999
Q ss_pred hccCceEEEEE
Q 020366 289 QYLGQQFYLKV 299 (327)
Q Consensus 289 ~~~Gm~~~~~v 299 (327)
++.|||+.|+|
T Consensus 437 ~d~GMm~~~~V 447 (448)
T 3aw5_A 437 EDGGMMINIAV 447 (448)
T ss_dssp HHTTCEEEEEE
T ss_pred HhCCCceEEEe
Confidence 99999999987
No 15
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.6e-44 Score=350.03 Aligned_cols=231 Identities=18% Similarity=0.197 Sum_probs=168.6
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCcc-ceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC-----CCc
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSH-TIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-----NVL 74 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~-v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-----~~~ 74 (327)
||||||+|+.+.|.|+|+||+|+|||+||++ ++|+.+++|.|++||||||||++++ .+.|.|++...... ...
T Consensus 231 RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~ 309 (481)
T 3zx1_A 231 RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEP 309 (481)
T ss_dssp EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCC
T ss_pred EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCC
Confidence 8999999999999999999999999999877 5899999999999999999999986 56788877533210 011
Q ss_pred eeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccC-----
Q 020366 75 TATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLIN----- 149 (327)
Q Consensus 75 ~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 149 (327)
....++++.... .+..+|. .|.+.+..+. ...++++.+...+....
T Consensus 310 ~~~~~~~~~~~~--~~~~lP~------------------~l~~~~~~~~---------~~~~r~~~l~~~~~~~~~~~~~ 360 (481)
T 3zx1_A 310 NTLFLANINLKK--ENVELPK------------------NLKIFKPSEE---------PKEFKEIIMSEDHMQMHGMMGK 360 (481)
T ss_dssp CCEEEEEEEEEC--CCCCCCS------------------CSCCCCCCCC---------CCEEEEEEEEECCSTTTTGGGC
T ss_pred CceeEEEEecCC--CCccCCc------------------cccCCCCCCC---------CCcEEEEEEeccchhccccccc
Confidence 233344433221 1112221 1111111111 12466676654221000
Q ss_pred Ce--------EEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcC
Q 020366 150 GK--------LRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQ 221 (327)
Q Consensus 150 g~--------~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~H 221 (327)
+. ..|+|||+.|... .| .+.++.|++|+|+|.|.+.+.|
T Consensus 361 ~~~~~~~~~~~~~~iNG~~~~~~-~~--------------------------------~~~~~~G~~v~w~l~N~~~~~H 407 (481)
T 3zx1_A 361 SEGELKIALASMFLINRKSYDLK-RI--------------------------------DLSSKLGVVEDWIVINKSHMDH 407 (481)
T ss_dssp CHHHHHHHHHTTEEETTBCCCTT-CC--------------------------------CEEEETTCCEEEEEEECSSSCE
T ss_pred ccccccccccceeEECCEeCCCC-Cc--------------------------------eEEeCCCCEEEEEEEcCCCCce
Confidence 11 1499999988631 11 1568899999999999999999
Q ss_pred ceeecCCCeEEEEec-cCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366 222 SWHLDGYDFWVVGYG-SGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 222 P~HLHG~~F~Vl~~g-~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
|||||||.|+|++++ .|. .....++.|||||.|+|+++++|+|++||||.||||||+++|++.|||..|+|.
T Consensus 408 p~HlHG~~F~vl~~~~~g~-------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 408 PFHIHGTQFELISSKLNGK-------VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEEETTCCEEEEEEEETTE-------EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred eEEEeccEEEEEEecccCC-------CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 999999999999983 232 111234899999999999999999999999999999999999999999999986
Q ss_pred c
Q 020366 301 N 301 (327)
Q Consensus 301 ~ 301 (327)
|
T Consensus 481 ~ 481 (481)
T 3zx1_A 481 E 481 (481)
T ss_dssp C
T ss_pred C
Confidence 3
No 16
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=9.4e-43 Score=345.79 Aligned_cols=243 Identities=14% Similarity=0.125 Sum_probs=166.2
Q ss_pred CeeEEecCCCcEEEEEEeCC-------eEEEEEecCccc-eeeEee------EEEEcCCceEEEEEEeCCCCC-ceEEEE
Q 020366 1 MFRISNVGLSTSFNFRIQGH-------TMKLVEVEGSHT-IQNIYD------SLDVHVGQSVSVLVTLNQPPK-DYYIVA 65 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh-------~l~VIa~DG~~v-~P~~v~------~l~l~~GqRydvlv~~~~~~~-~y~ir~ 65 (327)
||||||+|+.+.|.|+|++| +|+|||+||+++ +|++++ +|.|++||||||||++++..| +|+|+.
T Consensus 275 RlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~ 354 (612)
T 2g23_A 275 RLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVD 354 (612)
T ss_dssp EEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEE
T ss_pred EEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEe
Confidence 89999999999999999999 899999999999 599999 999999999999999998545 699887
Q ss_pred EecccCC-------CceeEEEEEecCCCC--CCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCce
Q 020366 66 STRFTKN-------VLTATAILHYTNSHS--PASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTT 136 (327)
Q Consensus 66 ~~~~~~~-------~~~~~ail~y~~~~~--~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~ 136 (327)
....... ......|+++..... ..+..+|. .|.+... +.+.. .....
T Consensus 355 ~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~------------------~L~~~~~-~l~~~-----~~~~~ 410 (612)
T 2g23_A 355 KGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPE------------------VLSGSFR-RMSHD-----IPHGH 410 (612)
T ss_dssp CCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCS------------------SCCSSCC-CCCTT-----SCCEE
T ss_pred CCccCCCCccccccCccccceEEEEEccCCCCCCCCCCh------------------hhccccc-cCCcc-----cccce
Confidence 6431111 001113554442211 11111221 0100000 00000 00001
Q ss_pred EEEEE-----------------ecc---------------ccccCC-eEEEEEcCccCcCCCCccccccccCCCCccccC
Q 020366 137 RTIVL-----------------ANS---------------APLING-KLRYAVNGISYVNSDTPLKLADYFNIPGIFSVN 183 (327)
Q Consensus 137 ~~~~~-----------------~~~---------------~~~~~g-~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~ 183 (327)
|.+.+ ... ....+| ...|+|||+.|.+.
T Consensus 411 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~------------------- 471 (612)
T 2g23_A 411 RLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDG------------------- 471 (612)
T ss_dssp EEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSC-------------------
T ss_pred eEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCC-------------------
Confidence 11111 100 000122 24577888777521
Q ss_pred CCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc----------------cccc
Q 020366 184 SIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE----------------KRRT 247 (327)
Q Consensus 184 ~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~----------------~~~~ 247 (327)
..+.++.|++|+|.|.|.+.+.||||||||.|+||+++.+.++.. ....
T Consensus 472 ---------------~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 536 (612)
T 2g23_A 472 ---------------LGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp ---------------CCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred ---------------CceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccC
Confidence 115788999999999999999999999999999999863322100 0023
Q ss_pred CCCCCCCceeeEEeCCCCEEEEEEEec-CCeeeEEEeeehhhhccCceEEEEEEc
Q 020366 248 YNLADTLTRHTAQVYPQSWTVILVSLD-NQGMWNMRSAIWERQYLGQQFYLKVWN 301 (327)
Q Consensus 248 ~n~~~p~~rDTv~vp~~g~~virf~ad-npG~W~~HCHi~~h~~~Gm~~~~~v~~ 301 (327)
++..++.|||||.|+++++++|+|++| |||.|||||||++|++.|||..|.|..
T Consensus 537 ~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p 591 (612)
T 2g23_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMP 591 (612)
T ss_dssp CCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEEC
T ss_pred CCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECc
Confidence 445567899999999999999999999 999999999999999999999999863
No 17
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=6.8e-43 Score=338.75 Aligned_cols=231 Identities=18% Similarity=0.236 Sum_probs=161.0
Q ss_pred CeeEEecCCCcEEEEEE-eCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC-----CC
Q 020366 1 MFRISNVGLSTSFNFRI-QGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-----NV 73 (327)
Q Consensus 1 RlRliNa~~~~~~~~si-dgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-----~~ 73 (327)
||||||+|+.+.|.|+| |||+|+|||+||+++ +|+++++|.|++||||||||++++ .+.|+|++...... ..
T Consensus 204 RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~ 282 (488)
T 3od3_A 204 RLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPF 282 (488)
T ss_dssp EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTT
T ss_pred EEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccc
Confidence 89999999999999999 699999999999986 899999999999999999999996 56799987643221 00
Q ss_pred ceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEecc---------
Q 020366 74 LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANS--------- 144 (327)
Q Consensus 74 ~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------- 144 (327)
.....+++......+.+..+|. .|.+.+.. |. .....+|++.+...
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~P~------------------~L~~~~~~--~~-----~~~~~~r~~~l~~~~~~~~~~~~ 337 (488)
T 3od3_A 283 DKPHPVMRIQPIAISASGALPD------------------TLSSLPAL--PS-----LEGLTVRKLQLSMDPMLDMMGMQ 337 (488)
T ss_dssp TSCEEEEEEEEEEEECCCCCCS------------------CCCCCCCC--CC-----CTTCCEEEEEEEECHHHHHHHHH
T ss_pred cCccceeEecccccCCCCCCCc------------------ccccCCCC--cc-----cccccceEEEEEecccccccccc
Confidence 1122233332111001111111 11111110 10 00123555555321
Q ss_pred ----------cc-c---------cCCe-------------EEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCC
Q 020366 145 ----------AP-L---------INGK-------------LRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSG 191 (327)
Q Consensus 145 ----------~~-~---------~~g~-------------~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~ 191 (327)
+. . ..|. ..|+|||++|... .|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~-~~------------------------ 392 (488)
T 3od3_A 338 MLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMN-KP------------------------ 392 (488)
T ss_dssp HHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTT-CC------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccccceeeECCeeCCCC-CC------------------------
Confidence 00 0 0110 1389999998631 11
Q ss_pred CCCcceeeEEEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEE
Q 020366 192 GASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVIL 270 (327)
Q Consensus 192 ~~~~~~~~~~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~vir 270 (327)
.+.++.|++++|.|.|.+ .+.|||||||++|+|++++.... ...++.|||||.|+ ++++.|+
T Consensus 393 --------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~--------~~~~~~~kDTV~v~-g~~~~i~ 455 (488)
T 3od3_A 393 --------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP--------AAHRAGWKDTVKVE-GNVSEVL 455 (488)
T ss_dssp --------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCC--------CGGGSSSBSEEEES-SSEEEEE
T ss_pred --------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCcc--------ccccCCceeEEEeC-CCEEEEE
Confidence 146789999999999988 67999999999999999963211 12246899999999 9999999
Q ss_pred EEe----cCCeeeEEEeeehhhhccCceEEEEE
Q 020366 271 VSL----DNQGMWNMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 271 f~a----dnpG~W~~HCHi~~h~~~Gm~~~~~v 299 (327)
|++ +|||.||||||+++|++.|||..|+|
T Consensus 456 ~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 456 VKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp ECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred EEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 997 45789999999999999999999975
No 18
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.95 E-value=1.8e-28 Score=237.07 Aligned_cols=225 Identities=15% Similarity=0.085 Sum_probs=145.1
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc-CC-CceeEE
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT-KN-VLTATA 78 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~-~~-~~~~~a 78 (327)
||||+|++.. .+.++|+.|.+ ++.||.+ +.+.|+|||||++++++++ +|.||++...... .+ .....+
T Consensus 206 ~~rl~N~~~~-~~~~~ih~Hg~--~~~DG~~------~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~~~~~Gl~g 275 (447)
T 2dv6_A 206 ELHLKNHKDS-LMVHSVDFHGA--TGPGGAA------AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPTHITNGMYG 275 (447)
T ss_dssp EEEEEECTTC-SSCBCCEETTC--CSGGGGG------GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHHHHHTTCEE
T ss_pred EEEEEeCCCC-ceeEEEeeccc--cCCCCCC------ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHHHHhCCCEE
Confidence 7999999862 23345555654 4789984 2235999999999999987 5899999864210 00 012346
Q ss_pred EEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEcC
Q 020366 79 ILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNG 158 (327)
Q Consensus 79 il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~ 158 (327)
.|.|.+.. .+|. .+.+..+ .+.......... ......+............|+|||
T Consensus 276 ~l~v~~~~-----~~P~---~d~~~~~--------~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~~~~~iNG 330 (447)
T 2dv6_A 276 LLLVEPEG-----GLPQ---VDREFYV--------MQGEIYTVKSFG---------TSGEQEMDYEKLINEKPEYFLFNG 330 (447)
T ss_dssp EEEEECTT-----CSCC---CSEEEEE--------EEEEECBSSCTT---------CCEECCBBHHHHHTTCCSEEEETT
T ss_pred EEEEeCCC-----CCCC---CCeeEEE--------EecccccCCccc---------ccccccCChHHhhccCCCEEEECC
Confidence 67675432 1221 1111100 000000000000 000000110000001124689999
Q ss_pred ccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEecc
Q 020366 159 ISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGS 237 (327)
Q Consensus 159 ~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~ 237 (327)
+.+.... ..++.++.|++++|+|.|.+ ...||||||||+|+||+++
T Consensus 331 ~~~~~~~--------------------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~d- 377 (447)
T 2dv6_A 331 SVGSLTR--------------------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSL- 377 (447)
T ss_dssp STTCCCC--------------------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGG-
T ss_pred cccCCCC--------------------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcC-
Confidence 8774210 12367899999999999987 5789999999999999997
Q ss_pred CCCCccccccCCCCCCC-ceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcC
Q 020366 238 GQWAAEKRRTYNLADTL-TRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA 302 (327)
Q Consensus 238 G~~~~~~~~~~n~~~p~-~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~ 302 (327)
|.+ +.+|. +|||+.|+++++++|+|++||||.|+||||+++|...||++.+.|..+
T Consensus 378 G~~---------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~ 434 (447)
T 2dv6_A 378 GSV---------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGP 434 (447)
T ss_dssp GCS---------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSC
T ss_pred Ccc---------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCC
Confidence 421 22344 799999999999999999999999999999999999999999998643
No 19
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.95 E-value=1.9e-27 Score=221.77 Aligned_cols=94 Identities=11% Similarity=0.127 Sum_probs=81.5
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe---cCCe
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL---DNQG 277 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a---dnpG 277 (327)
+.++.|++|+|+|.|.+...||||||||.|+|++. |.+.. ....+.++||+.|++++++.++|.+ ||||
T Consensus 211 l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG 282 (343)
T 3cg8_A 211 FEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAG 282 (343)
T ss_dssp EEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred EEeCCCCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCe
Confidence 67899999999999999899999999999999743 43321 1123678999999999999999995 8999
Q ss_pred eeEEEeeehhhhccCceEEEEEEcC
Q 020366 278 MWNMRSAIWERQYLGQQFYLKVWNA 302 (327)
Q Consensus 278 ~W~~HCHi~~h~~~Gm~~~~~v~~~ 302 (327)
.|+||||+++|+++||+..|.|..+
T Consensus 283 ~w~~HCHi~~H~~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 283 AWMYHCHVQSHSDMGMVGLFLVKKP 307 (343)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEECT
T ss_pred eEEEeCCCHHHHhccCcEEEEEecC
Confidence 9999999999999999999998754
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.94 E-value=1.8e-26 Score=215.07 Aligned_cols=218 Identities=16% Similarity=0.187 Sum_probs=145.5
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEe---cCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc---C-CC
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEV---EGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT---K-NV 73 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~---DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~---~-~~ 73 (327)
|+||+|.+.. ..+|..|-+.+++. ||.+. +....|+|||||++.+++++ +|.||..+..... . ..
T Consensus 46 ~v~v~N~l~~---~~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~~~-~Gt~wyH~H~~~~~q~~~~G 117 (339)
T 2zwn_A 46 IVNVTNNTSL---PHTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKADR-IGTLWYHCHVNVNEHVGVRG 117 (339)
T ss_dssp EEEEEEESSS---CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS-CEEEEEECCSSHHHHTTTSC
T ss_pred EEEEEECCCC---CccEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEECCC-CEEEEEEecCCchhhhhcCC
Confidence 6899999864 36888888888886 99863 34456999999999999985 7899999765321 1 22
Q ss_pred ceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEE
Q 020366 74 LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLR 153 (327)
Q Consensus 74 ~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 153 (327)
+.+.-|+. ... + ..++.....++...+. + +.+.. ...+... .. . ......
T Consensus 118 l~G~liV~--p~~-~--~~~~~~~d~e~~l~l~---d--~~~~~-~~~~~~~------g~------------~-~~~~~~ 167 (339)
T 2zwn_A 118 MWGPLIVD--PKQ-P--LPIEKRVTKDVIMMMS---T--WESAV-ADKYGEG------GT------------P-MNVADY 167 (339)
T ss_dssp CEEEEEEE--CSS-C--CTTGGGCSEEEEEEEE---E--ECGGG-TTCTTCC------CS------------T-TSCCCE
T ss_pred ceEeEEec--CCC-c--ccccccCCceEEEEee---h--eeccc-ccccCCC------CC------------C-ccccce
Confidence 33322332 221 0 0111100011100000 0 01100 0000000 00 0 001236
Q ss_pred EEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEE
Q 020366 154 YAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVV 233 (327)
Q Consensus 154 ~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl 233 (327)
|+|||+.|.. ..++.++.|++|+|+|.|.+...||||||||+|+|+
T Consensus 168 ~~ING~~~~~----------------------------------~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi 213 (339)
T 2zwn_A 168 FSVNAKSFPL----------------------------------TQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVT 213 (339)
T ss_dssp EEETTBCTTS----------------------------------SCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEE
T ss_pred EEEccccCCC----------------------------------cccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEE
Confidence 8999976631 112578899999999999988899999999999999
Q ss_pred EeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhh------hccCceEEEEEE
Q 020366 234 GYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWER------QYLGQQFYLKVW 300 (327)
Q Consensus 234 ~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h------~~~Gm~~~~~v~ 300 (327)
+.+.+ ++.+|.++||+.|++|+++.|+|++||||.|+||||++.| ...||++.+.+.
T Consensus 214 ~~DG~----------~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~ 276 (339)
T 2zwn_A 214 HKDGL----------PLDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYD 276 (339)
T ss_dssp EETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEET
T ss_pred EeCCe----------ecCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEEC
Confidence 99632 2234789999999999999999999999999999999998 678999988875
No 21
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.92 E-value=5.3e-25 Score=200.74 Aligned_cols=206 Identities=16% Similarity=0.149 Sum_probs=137.8
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc----CCCcee
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT----KNVLTA 76 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~----~~~~~~ 76 (327)
|+|+.|.... ...+++-|.. ..+.||.+- +....|.|||+++.-+++++ +|.||........ ...+.+
T Consensus 77 ~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl~G 148 (288)
T 3gdc_A 77 RIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDATP-FGTHLYHCHQSPLAPHIAKGLYG 148 (288)
T ss_dssp EEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECCS-CEEEEEECCCSSHHHHHHTTCEE
T ss_pred EEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcCC-CccEEEEecCcchHHHHhCcCeE
Confidence 4678887643 4456666653 457888763 13356899999999999964 7899998765310 112223
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEE
Q 020366 77 TAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAV 156 (327)
Q Consensus 77 ~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i 156 (327)
.|...... ..+ + .+-++.+ .+.... . ........|+|
T Consensus 149 --~liV~~~~-----~~~--~-~d~e~~l--------~~~d~~-----------------------~--~~g~~~~~~~i 185 (288)
T 3gdc_A 149 --GFIVEPKE-----GRP--P-ADDEMVM--------VMNGYN-----------------------T--DGGDDNEFYSV 185 (288)
T ss_dssp --EEEEECSS-----CCC--C-CSEEEEE--------EEEEEC-----------------------C--SSTTCCSEEEE
T ss_pred --EEEEeCCc-----cCC--C-CcceEEE--------EEeeEe-----------------------c--CCCCCcceEEE
Confidence 22222211 010 0 0101000 000000 0 00001236899
Q ss_pred cCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCC--cCceeecCCCeEEEE
Q 020366 157 NGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKT--MQSWHLDGYDFWVVG 234 (327)
Q Consensus 157 N~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~--~HP~HLHG~~F~Vl~ 234 (327)
||+.|.... ..+.++.|++|+|.|.|.+.. .||||||||.|+|++
T Consensus 186 NG~~~~~~~---------------------------------~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~ 232 (288)
T 3gdc_A 186 NGLPFHFMD---------------------------------FPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP 232 (288)
T ss_dssp TTSTTHHHH---------------------------------SCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE
T ss_pred CcccccccC---------------------------------cccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc
Confidence 998874200 115778999999999999753 599999999999998
Q ss_pred eccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEc
Q 020366 235 YGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWN 301 (327)
Q Consensus 235 ~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~ 301 (327)
.|. .+..|.++||+.|++++++.|+|++++||.|+||||+++|++.|||..++|.+
T Consensus 233 ~g~-----------~~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 233 TGT-----------MLTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp TTC-----------CSSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CCC-----------ccCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 542 12346899999999999999999999999999999999999999999999863
No 22
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.92 E-value=7.6e-25 Score=198.49 Aligned_cols=97 Identities=10% Similarity=0.123 Sum_probs=83.8
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec---CCe
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD---NQG 277 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad---npG 277 (327)
+.++.|++|+|+|.|.+...||||||||.|++++. |.++. ....+.++||+.|+++++..++|+++ |||
T Consensus 170 i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~--G~~~~------p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG 241 (276)
T 3kw8_A 170 FEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAG 241 (276)
T ss_dssp EEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred EEEecCCEEEEEEecCCCcceeEEEccceeEEecc--CccCC------CcccccCCccEEeCCCceEEEEEEeccCCCCC
Confidence 67899999999999998899999999999999764 43321 11235799999999999999999997 899
Q ss_pred eeEEEeeehhhhccCceEEEEEEcCccc
Q 020366 278 MWNMRSAIWERQYLGQQFYLKVWNAVHS 305 (327)
Q Consensus 278 ~W~~HCHi~~h~~~Gm~~~~~v~~~~~~ 305 (327)
.|+||||+++|++.||+..|+|.++++.
T Consensus 242 ~w~~HCH~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 242 AWMYHCHVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred eEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence 9999999999999999999999876553
No 23
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.89 E-value=4e-23 Score=190.41 Aligned_cols=111 Identities=12% Similarity=0.041 Sum_probs=89.7
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEE---ecCCe
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVS---LDNQG 277 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~---adnpG 277 (327)
+.++.|++|+|+|.|.+...||||||||.|+|++.+... .....|.++||+.|.|++...++|. ++|||
T Consensus 176 l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG 247 (313)
T 3tas_A 176 FEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG 247 (313)
T ss_dssp EEEETTCEEEEEEEEESSCCEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred cccccCCEEEEEEecccccceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE
Confidence 678899999999999999999999999999999876321 1234578999999999998877775 46999
Q ss_pred eeEEEeeehhhhccCceEEEEEEcCcccccccCCCCCch-hhccc
Q 020366 278 MWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNI-LVCGK 321 (327)
Q Consensus 278 ~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~~~-~~C~~ 321 (327)
.||||||+++|+++|||..|.|.+++..+ ....|.+. ..|-.
T Consensus 248 ~w~~HCHi~~H~~~GM~~~f~V~~~d~~~--p~~~p~~~~~~~~~ 290 (313)
T 3tas_A 248 AWMYHCHVQSHSDMGMVGLFLVKKPDGTI--PGYDPHRHHHGAAS 290 (313)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEECTTCCC--TTCCTTCCBTTBCC
T ss_pred eEEEEeCChHHHHCCCeEEEEEECCCCCC--CCCCcccccccccc
Confidence 99999999999999999999998776543 23345443 35543
No 24
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.89 E-value=1.4e-23 Score=192.24 Aligned_cols=96 Identities=19% Similarity=0.197 Sum_probs=81.4
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEE---EEEEEecCCe
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWT---VILVSLDNQG 277 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~---virf~adnpG 277 (327)
+.++.|++|+|+|.|.+...||||||||.|+|+..+... .....+.++||+.|.+++.. +++|++||||
T Consensus 192 l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~--------~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG 263 (299)
T 3t9w_A 192 FEANLGERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRT--------SEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG 263 (299)
T ss_dssp EEEETTCEEEEEEEEESSCCCEEEETTCCEESSSSSSCC--------STTCCCCEESEEECCTTCEEEEEEETTTTTCSE
T ss_pred ceecCCCEEEEEEEeccccceeeeEecceEEEEeccccc--------CCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe
Confidence 678899999999999999999999999999998886432 12334678999999998754 5566778999
Q ss_pred eeEEEeeehhhhccCceEEEEEEcCcc
Q 020366 278 MWNMRSAIWERQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 278 ~W~~HCHi~~h~~~Gm~~~~~v~~~~~ 304 (327)
.||||||+++|++.||+..|+|.+.+.
T Consensus 264 ~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 264 MWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 999999999999999999999986543
No 25
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.88 E-value=7.6e-23 Score=188.86 Aligned_cols=91 Identities=13% Similarity=0.167 Sum_probs=81.3
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~ 280 (327)
+.++.|++|+|+|.|.+...||||||||.|+|++++.+ .+.+|.++||+.|++++++.|+|++||||.|+
T Consensus 180 l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~----------~~~~p~~~dtv~l~pger~~v~~~a~~pG~w~ 249 (318)
T 3g5w_A 180 IRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGF----------PLDKPIKGDTVLIGPGERYDVILNMDNPGLWM 249 (318)
T ss_dssp EEECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEEE
T ss_pred EEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCc----------ccCCCccccEEEECCCCEEEEEEECCCCeeEE
Confidence 57899999999999998889999999999999999632 22357899999999999999999999999999
Q ss_pred EEeeehhhhc------cCceEEEEEEc
Q 020366 281 MRSAIWERQY------LGQQFYLKVWN 301 (327)
Q Consensus 281 ~HCHi~~h~~------~Gm~~~~~v~~ 301 (327)
||||+++|++ .||+..+.+..
T Consensus 250 ~hCH~~~H~~~g~~~~~Gm~~~i~~~g 276 (318)
T 3g5w_A 250 IHDHVDTHTTNGDKPDGGIMTTIEYEE 276 (318)
T ss_dssp EEESSGGGSCBTTBSSCBSEEEEEETT
T ss_pred EEeccHHHhhccCcCCCCCEEEEEECC
Confidence 9999999998 57888888753
No 26
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.87 E-value=2e-22 Score=212.42 Aligned_cols=89 Identities=10% Similarity=0.237 Sum_probs=81.2
Q ss_pred eEEEecCCcEEEEEEEeCC--CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC
Q 020366 199 SVMQVNLHEYIEVVFQNNE--KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ 276 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~--~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp 276 (327)
..+.++.|++|+|+|.|.+ ...||||||||.|+|+++| |.||||+.|+++++++|+|++|||
T Consensus 970 ~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~ad~p 1033 (1065)
T 2j5w_A 970 QGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTP 1033 (1065)
T ss_dssp CCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSC
T ss_pred ccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------CceeeEEEECCCCeEEEEEECCCC
Confidence 3467899999999999985 5789999999999998653 679999999999999999999999
Q ss_pred eeeEEEeeehhhhccCceEEEEEEcCc
Q 020366 277 GMWNMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 277 G~W~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
|.|+||||+++|++.|||+.|.|.+..
T Consensus 1034 G~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1034 GIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp EEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred eeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 999999999999999999999997543
No 27
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.83 E-value=4.5e-20 Score=185.84 Aligned_cols=227 Identities=14% Similarity=0.172 Sum_probs=130.8
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEE-EEecCccce---e-eEeeEEEEcCCceEEEEEEeCCC-----CC----ceEEEEE
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKL-VEVEGSHTI---Q-NIYDSLDVHVGQSVSVLVTLNQP-----PK----DYYIVAS 66 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~V-Ia~DG~~v~---P-~~v~~l~l~~GqRydvlv~~~~~-----~~----~y~ir~~ 66 (327)
|+||.|.... .. +|.-|-|.+ .+.||.+.. | ..+....|.|||+++..+++++. +| .||....
T Consensus 80 ~v~~~N~l~~-~~--siH~HGl~~~~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH 156 (647)
T 1sdd_B 80 QVRFKNLASR-PY--SLHAHGLSYEKSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSA 156 (647)
T ss_dssp EEEECCCSSS-CB--CCEEETCC---------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECC
T ss_pred EEEEEECCCC-ce--EEecCcceeCCCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccC
Confidence 4788888753 33 444444444 688998742 2 23446679999999999999874 46 8999887
Q ss_pred eccc---CCCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEE-Ee
Q 020366 67 TRFT---KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIV-LA 142 (327)
Q Consensus 67 ~~~~---~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~-~~ 142 (327)
.... ...+.+.-|++-.+.. .. .+..|..+.+..+- +.++..+. ........ ...+. ..
T Consensus 157 ~~~~~q~~~GL~G~lIV~~~~~~-~~---~~~~~~~~~e~~l~-l~~~d~~~-~w~~~~~~-----------~~~~~~~~ 219 (647)
T 1sdd_B 157 VNPEKDIHSGLIGPLLICRKGTL-DK---ETNMPVDMREFVLL-FMVFDEKK-SWYYDKKP-----------TRSWRRAS 219 (647)
T ss_dssp SSHHHHHTTTCEEEEEEECTTSS-CT---TSCCCSSCCEEEEE-EEEEEGGG-SSCCC----------------------
T ss_pred CCCcccccccCccCEEEeeCCCc-cc---ccCCCCcceeEEEE-EEeecCcc-ccccccCc-----------ccccccCC
Confidence 6321 1233443334322211 10 01112111111110 00000000 00000000 00000 00
Q ss_pred ccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCC--Cc
Q 020366 143 NSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEK--TM 220 (327)
Q Consensus 143 ~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~--~~ 220 (327)
.. .......++|||+.|. .| .+.++.|++|+|.|.|.+. ..
T Consensus 220 ~~--~~~~~~~~~iNG~~~~---~p--------------------------------~l~v~~G~~vrlrliN~~~~~~~ 262 (647)
T 1sdd_B 220 SE--VKNSHEFHAINGMIYN---LP--------------------------------GLRMYEQEWVRLHLLNLGGSRDI 262 (647)
T ss_dssp ------CCCEEEEETTBSSC---CC--------------------------------CCEEETTCEEEEEEEECCCTTCC
T ss_pred cc--hhhcCceeccCCEecC---CC--------------------------------CeEEcCCCEEEEEEEeCCCCCcc
Confidence 00 0111246899998762 11 1467889999999999874 48
Q ss_pred CceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366 221 QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 221 HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
||||+|||.|+|++.+ +.++||+.|.||+++.|+|++++||.|+||||+.+|+++||++.|.|.
T Consensus 263 h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 263 HVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIV 326 (647)
T ss_dssp EEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEE
T ss_pred eeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCcccccccccccceeee
Confidence 9999999999998643 458999999999999999999999999999999999999999999996
No 28
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.81 E-value=2.2e-21 Score=178.31 Aligned_cols=213 Identities=15% Similarity=0.127 Sum_probs=117.9
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccce----eeEeeEEEEcCCceEEEEEEeCCCC---------CceEEEEEe
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI----QNIYDSLDVHVGQSVSVLVTLNQPP---------KDYYIVAST 67 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~----P~~v~~l~l~~GqRydvlv~~~~~~---------~~y~ir~~~ 67 (327)
|+||+|... ..+.++.-|..+. .+.||.+.. ++......|+||||++..+++++.. |.||.....
T Consensus 71 ~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~ 148 (306)
T 1sdd_A 71 KVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYV 148 (306)
T ss_dssp EEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCS
T ss_pred EEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCCceEEEEeccC
Confidence 689999764 4444444444421 268998752 2333456799999999999997643 589999874
Q ss_pred ccc---CCCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEecc
Q 020366 68 RFT---KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANS 144 (327)
Q Consensus 68 ~~~---~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 144 (327)
... ...+.+ ++|.+...... ..+.+ +..+.+ +...+..... . .+
T Consensus 149 ~~~~q~~~GL~G-~liV~~~~~~~-~~~~~--~~~d~e--------~~l~~~d~d~----~-----------------~~ 195 (306)
T 1sdd_A 149 NLVEDFNSGLIG-PLLICKKGTLT-EDGTQ--KMFEKQ--------HVLMFAVFDE----S-----------------KS 195 (306)
T ss_dssp SSHHHHHTTCCE-EEEEECTTCBC-TTSSB--SSSCCC--------CCCBCCEEET----T-----------------SS
T ss_pred CchhhhccCceE-EEEEccCCCCC-ccCCc--Ccccce--------EEEEEEeccc----c-----------------cc
Confidence 321 122334 34444322100 00111 000000 0000000000 0 00
Q ss_pred ccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCC--CcCc
Q 020366 145 APLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEK--TMQS 222 (327)
Q Consensus 145 ~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~--~~HP 222 (327)
.. ......|+|||+.+.. .| .+.++.|++|+|.|.|.+. ..||
T Consensus 196 ~~-~~~~~~~~ING~~~~~--~p--------------------------------~l~v~~G~~vrlrliN~g~~~~~h~ 240 (306)
T 1sdd_A 196 WN-QTSSLMYTVNGYVNGT--MP--------------------------------DITVCAHDHISWHLIGMSSGPELFS 240 (306)
T ss_dssp SS-CCCCEEECSSSCCSSC--CC--------------------------------CCCCCCC------BBCCCSSSCEEC
T ss_pred cc-cCCCcceeeCCEecCC--Cc--------------------------------ceEEcCCCEEEEEEEeCCCCCccEE
Confidence 00 0112357889987631 11 1356789999999999875 4799
Q ss_pred eeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcC
Q 020366 223 WHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA 302 (327)
Q Consensus 223 ~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~ 302 (327)
||+|||.|.+ .| .++||+.|.||+.+.|+|.+++||.|+||||+++|++.||+..+.|.+.
T Consensus 241 ~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 241 IHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 9999999986 23 3589999999999999999999999999999999999999999998643
No 29
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.80 E-value=2.8e-19 Score=188.45 Aligned_cols=262 Identities=13% Similarity=0.149 Sum_probs=159.3
Q ss_pred CeeEEecCCC-cEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEE
Q 020366 1 MFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAI 79 (327)
Q Consensus 1 RlRliNa~~~-~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ai 79 (327)
||||||+|.. ..+.|+|+||+|+ ++|+.+++|.|++||||||+|++++ +|.|+|++....-. .....++
T Consensus 282 RlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dVlv~~~~-pG~y~i~~h~~~h~-~~Gm~~~ 351 (1065)
T 2j5w_A 282 KWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQN-PGEWMLSCQNLNHL-KAGLQAF 351 (1065)
T ss_dssp EEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEEEEEEECCS-CEEEEEEECSHHHH-HTTCEEE
T ss_pred EEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEEEEEeCC-CeeEEEEecCcchh-hCCCEEE
Confidence 8999999986 7999999999999 4688999999999999999999997 68999998764210 0124577
Q ss_pred EEecCCCCCCCCCCCCCCCCcccccccccccccccccccCC------CCCCCCCCCCCCcCceEEEEEeccccccCCeEE
Q 020366 80 LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA------RPNPQGSFHYGKINTTRTIVLANSAPLINGKLR 153 (327)
Q Consensus 80 l~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 153 (327)
++|.+...+.+.+.|..+. ...+ +..++.+.|++.|... .+.++++ ....+ +.......++++.
T Consensus 352 ~~V~~~~~~~~~~~~~g~~-~~~~-~i~A~e~~wdy~~~~~~~~~~~~~~~~~s-------~~~~~-l~~~~~~ig~~y~ 421 (1065)
T 2j5w_A 352 FQVQECNKSSSKDNIRGKH-VRHY-YIAAEEIIWNYAPSGIDIFTKENLTAPGS-------DSAVF-FEQGTTRIGGSYK 421 (1065)
T ss_dssp EEEECSCCCCCCCCCTTSE-EEEE-EEEEEEEEEESCTTSBCTTTCCBTTCTTC-------TTHHH-HCCBTTBCCSEEE
T ss_pred EEEecCCCccccccccccc-eeEE-EEeceecccccCCCCcccccccccCCCcc-------cchhh-hccCCcccCceEe
Confidence 8887654332222222211 1112 3345556666665432 1112211 01111 2221123344444
Q ss_pred EEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEE
Q 020366 154 YAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVV 233 (327)
Q Consensus 154 ~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl 233 (327)
-.++ +.|.+ ++|..+.. ..|.........+++.++.|++|+|+|.|.....|+||+||+.|+++
T Consensus 422 k~v~-~~y~d--------------~~f~~~~~-~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~ 485 (1065)
T 2j5w_A 422 KLVY-REYTD--------------ASFTNRKE-RGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKN 485 (1065)
T ss_dssp EEEE-EEESS--------------TTCCSBCC-CCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGG
T ss_pred eeee-ecccC--------------CceEEcCc-CCcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeecc
Confidence 4444 44432 12221100 00100001112467899999999999999999999999999999999
Q ss_pred EeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe---cCCe-------eeEEEeeehh--hhccCceEEEEEEc
Q 020366 234 GYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL---DNQG-------MWNMRSAIWE--RQYLGQQFYLKVWN 301 (327)
Q Consensus 234 ~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a---dnpG-------~W~~HCHi~~--h~~~Gm~~~~~v~~ 301 (327)
+.|. .+.... .+..+...++...|.||+..+-++.. +.|| .|+||+|+.. .+..|+...+.|-.
T Consensus 486 ~~g~-~~~~~~---~~~~~~~~~~~~~v~Pg~~~~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGpllic~ 561 (1065)
T 2j5w_A 486 NEGT-YYSPNY---NPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICK 561 (1065)
T ss_dssp GCSB-CCBCC----------CCCCSSCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEEC
T ss_pred CCCc-cccccc---ccccCCccCCCcccCCCCcEEEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceEEec
Confidence 9863 221110 00011224555667888876666654 4565 6999999966 56778888887765
Q ss_pred C
Q 020366 302 A 302 (327)
Q Consensus 302 ~ 302 (327)
.
T Consensus 562 ~ 562 (1065)
T 2j5w_A 562 K 562 (1065)
T ss_dssp T
T ss_pred c
Confidence 4
No 30
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.76 E-value=2e-17 Score=154.09 Aligned_cols=89 Identities=15% Similarity=0.159 Sum_probs=77.1
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCC--ceeeEEeCCCCEEEEEEEecCCee
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL--TRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~virf~adnpG~ 278 (327)
+.++.|++++|++.|.+...|++|+|||.|+|++. |.+ .+++ ++||+.|++|+.+.|.|.+++||.
T Consensus 233 l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~d--G~~----------~~~p~~~~dtv~l~pGer~~v~v~~~~pG~ 300 (340)
T 2bw4_A 233 LTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWAT--GKF----------RNPPDLDQETWLIPGGTAGAAFYTFRQPGV 300 (340)
T ss_dssp EEEETTCEEEEEEEESSSCBCEEEETCCEEEEETT--CCT----------TSCCEEEESCCCBCTTEEEEEEEECCSCEE
T ss_pred eEcCCCCEEEEEECCCCCccceEEecCcceEEeCC--Ccc----------cCCccccceEEEeCCCceEEEEEECCCCee
Confidence 67889999999988888889999999999999863 421 2233 479999999999999999999999
Q ss_pred eEEEeeeh-hhhccCceEEEEEEc
Q 020366 279 WNMRSAIW-ERQYLGQQFYLKVWN 301 (327)
Q Consensus 279 W~~HCHi~-~h~~~Gm~~~~~v~~ 301 (327)
|+||||++ +|.+.||++.+.|..
T Consensus 301 y~~~~h~~~~h~~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 301 YAYVNHNLIEAFELGAAGHFKVTG 324 (340)
T ss_dssp EEEEESSHHHHHTTSCEEEEEEES
T ss_pred eEEEcCchHHHHhCCCEEEEEECC
Confidence 99999999 599999999999873
No 31
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.74 E-value=1.8e-19 Score=183.53 Aligned_cols=84 Identities=17% Similarity=0.247 Sum_probs=76.9
Q ss_pred EEecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 201 MQVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
+.++.|++|+|.|.|.+. ..||||||||.|+|++.+ | .++||+.|+|++++.|+|++||||.
T Consensus 370 l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~d-g---------------~~~Dtv~l~Pg~~~~v~~~ad~pG~ 433 (770)
T 2r7e_B 370 LVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKE-E---------------YKMALYNLYPGVFETVEMLPSKAGI 433 (770)
T ss_dssp CCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSS-C---------------CEESEEECCTTCCCEEEECCSSCBC
T ss_pred eEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecC-C---------------ceeeEEEECCCeEEEEEEEeCCCCc
Confidence 567899999999999874 389999999999998764 2 3899999999999999999999999
Q ss_pred eEEEeeehhhhccCceEEEEEE
Q 020366 279 WNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 279 W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
|+||||+++|++.||++.|.|.
T Consensus 434 w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 434 WRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp CCBCCCSHHHHTTBCCCCCCBC
T ss_pred eEEEeccccccccccccccccc
Confidence 9999999999999999999884
No 32
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.73 E-value=3.5e-17 Score=151.54 Aligned_cols=90 Identities=18% Similarity=0.123 Sum_probs=79.7
Q ss_pred EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
+.++.|++++|.|.|.+ ...|+||||||.|+|++.+.+. .+|.++|++.|.+|+.+.|.|++++||.|
T Consensus 216 l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y 284 (327)
T 1kbv_A 216 LKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIPGNY 284 (327)
T ss_dssp EEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSCEEE
T ss_pred EEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCCeEE
Confidence 67899999999999986 4689999999999999997441 22778999999999999999999999999
Q ss_pred EEEeeehhhh-ccCceEEEEEEc
Q 020366 280 NMRSAIWERQ-YLGQQFYLKVWN 301 (327)
Q Consensus 280 ~~HCHi~~h~-~~Gm~~~~~v~~ 301 (327)
+||||+..|. ..||.+.+.+..
T Consensus 285 ~l~~h~~~~~~~~g~~a~l~~~g 307 (327)
T 1kbv_A 285 TLVDHSIFRAFNKGALGQLKVEG 307 (327)
T ss_dssp EEEESSTHHHHHSSCEEEEEEES
T ss_pred EEEeccccccccCCcEEEEEECC
Confidence 9999999995 788999998863
No 33
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.69 E-value=3e-18 Score=174.10 Aligned_cols=82 Identities=18% Similarity=0.158 Sum_probs=75.3
Q ss_pred EEecCCcEEEEEEEeCCCC--cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 201 MQVNLHEYIEVVFQNNEKT--MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~--~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
+.++.|++|+|.|.|.+.. .||||||||.|+|++ .++||+.|.|++.+.|+|+++|||.
T Consensus 246 l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg-------------------~~~Dtv~v~Pg~~~~v~~~~~~pG~ 306 (742)
T 2r7e_A 246 LIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRN-------------------HRQASLEISPITFLTAQTLLMDLGQ 306 (742)
T ss_dssp CEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETT-------------------EECCSCCCCTTCCCEEEECCCSCSE
T ss_pred eEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEe-------------------EecceEEeCCCcEEEEEEEeCCCee
Confidence 4688999999999998865 699999999999963 1489999999999999999999999
Q ss_pred eEEEeeehhhhccCceEEEEEEc
Q 020366 279 WNMRSAIWERQYLGQQFYLKVWN 301 (327)
Q Consensus 279 W~~HCHi~~h~~~Gm~~~~~v~~ 301 (327)
|+||||+++|++.||+..+.|..
T Consensus 307 w~~hCH~~~H~~~GM~~~~~V~~ 329 (742)
T 2r7e_A 307 FLLFCHISSHQHDGMEAYVKVDS 329 (742)
T ss_dssp ECCCCCSSSSSTTSCCBCEEECC
T ss_pred EEEEeCChhHHhCCCeEEEEEec
Confidence 99999999999999999999973
No 34
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.67 E-value=2.5e-18 Score=174.68 Aligned_cols=83 Identities=23% Similarity=0.313 Sum_probs=75.4
Q ss_pred EEecCCcEEEEEEEeCC--CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 201 MQVNLHEYIEVVFQNNE--KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~--~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
+.++.|++|+|.|.|.+ ...||||||||.|+|+ +.++||+.|.|++.+.|.|.+||||.
T Consensus 628 l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~-------------------~~~~Dtv~l~Pg~~~~v~~~ad~pG~ 688 (742)
T 2r7e_A 628 LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK-------------------MVYEDTLTLFPFSGETVFMSMENPGL 688 (742)
T ss_dssp CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB-------------------SSSBCSSCCCCCSSEECCEECCCCCC
T ss_pred EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe-------------------ccceeEEEECCCcEEEEEEEcCCCeE
Confidence 57899999999999964 3579999999999986 24799999999999999999999999
Q ss_pred eEEEeeehhhhccCceEEEEEEcC
Q 020366 279 WNMRSAIWERQYLGQQFYLKVWNA 302 (327)
Q Consensus 279 W~~HCHi~~h~~~Gm~~~~~v~~~ 302 (327)
|+||||+++|++.|||..|+|.+-
T Consensus 689 w~~hcH~~~H~~~GM~~~~~V~~~ 712 (742)
T 2r7e_A 689 WILGCHNSDFRNRGMTALLKVSSC 712 (742)
T ss_dssp SCCEECCCSTTHHHHSCCCCCCCC
T ss_pred EEEEeCCchHHhCCCeEEEEEEeC
Confidence 999999999999999999998743
No 35
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.57 E-value=1.3e-14 Score=134.56 Aligned_cols=90 Identities=10% Similarity=0.048 Sum_probs=74.8
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCC-ceeeEEeCCCCEEEEEEEecCCeee
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL-TRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~-~rDTv~vp~~g~~virf~adnpG~W 279 (327)
+.++.|++++|++.|.....+++++|||.|.|++ . |.+. ..|. ++||+.|.+|+.+.+.|.+++||.|
T Consensus 227 l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~v~a~~pG~y 295 (333)
T 1mzy_A 227 LKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFH---------NAPERDLETWFIRGGTAGAALYKFLQPGVY 295 (333)
T ss_dssp EEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEE
T ss_pred eEecCCCEEEEEECCCCCccccEEECCCCeEEEe-C-Cccc---------CCCccCcceEEECCCceEEEEEEcCCCEEE
Confidence 6788999999988877666666668889999987 3 5321 1122 5899999999999999999999999
Q ss_pred EEEeeehhhh-ccCceEEEEEEc
Q 020366 280 NMRSAIWERQ-YLGQQFYLKVWN 301 (327)
Q Consensus 280 ~~HCHi~~h~-~~Gm~~~~~v~~ 301 (327)
+||||+++|+ +.|||..|+|..
T Consensus 296 ~~~ch~~~h~~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 296 AYVNHNLIEAVHKGATAHVLVEG 318 (333)
T ss_dssp EEEESSHHHHHTTCCEEEEEEES
T ss_pred EEecChhhhHhhCCCEEEEEEcC
Confidence 9999999997 999999999974
No 36
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.53 E-value=6.6e-15 Score=136.24 Aligned_cols=85 Identities=24% Similarity=0.259 Sum_probs=74.6
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL 80 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail 80 (327)
||||||+|+.+.+.|+|+||.|+||+.||.+++|+.++++.|++||||||++++++ +|.|||++............|+|
T Consensus 225 RlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~~~~g~~a~l 303 (327)
T 1kbv_A 225 RMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRAFNKGALGQL 303 (327)
T ss_dssp EEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHHHHSSCEEEE
T ss_pred EEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-CeEEEEEeccccccccCCcEEEE
Confidence 89999999999999999999999999999999999999999999999999999997 68999999765431122468999
Q ss_pred EecCCC
Q 020366 81 HYTNSH 86 (327)
Q Consensus 81 ~y~~~~ 86 (327)
+|.+..
T Consensus 304 ~~~g~~ 309 (327)
T 1kbv_A 304 KVEGAE 309 (327)
T ss_dssp EEESCC
T ss_pred EECCCC
Confidence 998754
No 37
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.38 E-value=2.9e-12 Score=118.93 Aligned_cols=89 Identities=16% Similarity=0.201 Sum_probs=74.2
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCC--ceeeEEeCCCCEEEEEEEecCCee
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL--TRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~virf~adnpG~ 278 (327)
+.++.|++++|+..+.....+++++|||.|+|++ .|.+ .+|+ +.||+.|++|+.+.+.|.+++||.
T Consensus 227 l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~----------~~p~~~~~dtv~i~pGer~dvlv~~~~pG~ 294 (336)
T 1oe1_A 227 LTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKF----------ANPPQRDLETWFIRGGSAGAALYTFKQPGV 294 (336)
T ss_dssp EEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCT----------TSCCEEEESBCCBCTTEEEEEEEECCSCEE
T ss_pred eEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcC----------cCCccccceEEEECCCCcEEEEEEcCCCce
Confidence 6788999999876666666677778999999996 3422 2233 479999999999999999999999
Q ss_pred eEEEeeehhhh-ccCceEEEEEEc
Q 020366 279 WNMRSAIWERQ-YLGQQFYLKVWN 301 (327)
Q Consensus 279 W~~HCHi~~h~-~~Gm~~~~~v~~ 301 (327)
|+||||.+.|. ..||++.+.|..
T Consensus 295 y~~~~h~~~~~~~~G~~~~~~V~~ 318 (336)
T 1oe1_A 295 YAYLNHNLIEAFELGAAGHIKVEG 318 (336)
T ss_dssp EEEEESSHHHHHTTSCEEEEEEES
T ss_pred EEEEechhhccccCCCeEEEEECC
Confidence 99999999885 899999999973
No 38
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.38 E-value=1.2e-12 Score=125.84 Aligned_cols=92 Identities=16% Similarity=0.129 Sum_probs=80.5
Q ss_pred EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
+.++.|++|+|.|.|.+ ...|+||+|||.|.|++.+.+ ...|.+.|++.|.+|+...|.|.+++||.|
T Consensus 206 l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~-----------~~~p~~~~~~~l~pg~r~~v~v~~~~~G~y 274 (442)
T 2zoo_A 206 LTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGG-----------SLKNHNVQTTLIPAGGAAIVEFKVEVPGTF 274 (442)
T ss_dssp EEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGS-----------SCEECSBSEEEECTTEEEEEEEECCSCEEE
T ss_pred eEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCc-----------cCCCccceEEEECCCeeEEEEEEcCCCCeE
Confidence 67889999999999975 468999999999999999733 122778999999999999999999999999
Q ss_pred EEEeeehhh-hccCceEEEEEEcCc
Q 020366 280 NMRSAIWER-QYLGQQFYLKVWNAV 303 (327)
Q Consensus 280 ~~HCHi~~h-~~~Gm~~~~~v~~~~ 303 (327)
++|||...| ...||++.+.|....
T Consensus 275 ~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 275 ILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EEEESSTHHHHTTSCEEEEEEESCC
T ss_pred EEEecccccccccCceEEEEecCCC
Confidence 999999999 588999999987443
No 39
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.37 E-value=2.3e-11 Score=117.13 Aligned_cols=80 Identities=21% Similarity=0.219 Sum_probs=65.4
Q ss_pred EEecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 201 MQVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
++++.|++++|.+.|... ..|++|+||.. ..+ | ..|++.|.+|+...++|.+++||.
T Consensus 197 i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~----~~D-G----------------~~~~~~i~pG~~~~~~~~~~~~G~ 255 (447)
T 2dv6_A 197 LRVRVGDTVELHLKNHKDSLMVHSVDFHGAT----GPG-G----------------AAAFTQTDPGEETVVTFKALIPGI 255 (447)
T ss_dssp EEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGG-G----------------GGGGCCBCTTCEEEEEEECCSCEE
T ss_pred EEecCCCEEEEEEEeCCCCceeEEEeecccc----CCC-C----------------CCccEEeCCCCEEEEEEECCCCeE
Confidence 678999999999999853 68999999953 111 2 025567999999999999999999
Q ss_pred eEEEeee---hhhhccCceEEEEEEc
Q 020366 279 WNMRSAI---WERQYLGQQFYLKVWN 301 (327)
Q Consensus 279 W~~HCHi---~~h~~~Gm~~~~~v~~ 301 (327)
|.||||. ..|...||...+.|..
T Consensus 256 ~~yh~h~~~~~~~~~~Gl~g~l~v~~ 281 (447)
T 2dv6_A 256 YVYHCATPSVPTHITNGMYGLLLVEP 281 (447)
T ss_dssp EEEECCSSSHHHHHHTTCEEEEEEEC
T ss_pred EEEEeCCCChHHHHhCCCEEEEEEeC
Confidence 9999996 3678899999988854
No 40
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.33 E-value=2.4e-12 Score=104.26 Aligned_cols=92 Identities=12% Similarity=0.086 Sum_probs=71.4
Q ss_pred EEecCCcEEEEEEEeCCCC-cCceeecCCCeEEEE------eccC---CCCccccccCCCCCCCceeeEEeCCCCEEEEE
Q 020366 201 MQVNLHEYIEVVFQNNEKT-MQSWHLDGYDFWVVG------YGSG---QWAAEKRRTYNLADTLTRHTAQVYPQSWTVIL 270 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~-~HP~HLHG~~F~Vl~------~g~G---~~~~~~~~~~n~~~p~~rDTv~vp~~g~~vir 270 (327)
++++.|++|+|+|.|.+.+ .|.||+|+..+.+.. ...| .|.+. -....++||..|.+++...+.
T Consensus 37 i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 37 LTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp EEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTTCEEEEE
T ss_pred EEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCCCEEEEE
Confidence 6789999999999999888 899999987532110 0001 11100 012357899999999999999
Q ss_pred EEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366 271 VSLDNQGMWNMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 271 f~adnpG~W~~HCHi~~h~~~Gm~~~~~v 299 (327)
|.+++||.|+||||+..|+. ||...++|
T Consensus 111 f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 111 FTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 99999999999999988988 99999887
No 41
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.31 E-value=1.3e-12 Score=125.59 Aligned_cols=85 Identities=20% Similarity=0.237 Sum_probs=73.9
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL 80 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail 80 (327)
||||+|+|....+.|+|+||+|+||++||.+++|..++++.|++||||||+|++++ +|.|+++.............++|
T Consensus 215 rlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~~~~g~~a~l 293 (442)
T 2zoo_A 215 RLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRAFNKGALAML 293 (442)
T ss_dssp EEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHHHTTSCEEEE
T ss_pred EEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCC-CCeEEEEecccccccccCceEEE
Confidence 89999999989999999999999999999999999999999999999999999996 68999998754321123467999
Q ss_pred EecCCC
Q 020366 81 HYTNSH 86 (327)
Q Consensus 81 ~y~~~~ 86 (327)
+|.+..
T Consensus 294 ~v~~~~ 299 (442)
T 2zoo_A 294 KVEGPD 299 (442)
T ss_dssp EEESCC
T ss_pred EecCCC
Confidence 998764
No 42
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.26 E-value=2e-11 Score=93.60 Aligned_cols=85 Identities=16% Similarity=0.050 Sum_probs=66.4
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCe
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQG 277 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG 277 (327)
..+.++.|++|+| .|.+...|++|+||..|... .|.. . +....++..+++|+...++|.+ +.||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~~----~------~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKEL----A------DKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHHH----H------HHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---cccc----c------ccccccccccCCCCeEEEEEecCCCCe
Confidence 3478999999976 48888899999999876431 0100 0 0122588899999999999998 7999
Q ss_pred eeEEEeeehhhhccCceEEEEEE
Q 020366 278 MWNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 278 ~W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
.|.||||. |..+||...+.|.
T Consensus 84 ~y~y~C~~--H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECTT--TGGGTCEEEEEEC
T ss_pred eEEEEeCC--chhcCCEEEEEEc
Confidence 99999995 9999999999874
No 43
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.24 E-value=3.4e-11 Score=111.79 Aligned_cols=84 Identities=14% Similarity=0.210 Sum_probs=69.3
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccce-eeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc---C--CCc
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI-QNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT---K--NVL 74 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~-P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~---~--~~~ 74 (327)
||||+|++.. .+.|+|+||+|+||+.||.+++ |..++++.|++||||||++++++ +|.|++......- . ...
T Consensus 190 rlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~ 267 (339)
T 2zwn_A 190 KIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPG 267 (339)
T ss_dssp EEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSC
T ss_pred EEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCC
Confidence 7999999954 8999999999999999999986 89999999999999999999987 5777777764431 1 122
Q ss_pred eeEEEEEecCCC
Q 020366 75 TATAILHYTNSH 86 (327)
Q Consensus 75 ~~~ail~y~~~~ 86 (327)
...++|+|.+..
T Consensus 268 gm~a~l~~~g~~ 279 (339)
T 2zwn_A 268 GPITVIEYDGVP 279 (339)
T ss_dssp SSEEEEEETTSC
T ss_pred CcEEEEEECCCC
Confidence 346899998653
No 44
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.23 E-value=3.7e-11 Score=109.04 Aligned_cols=85 Identities=11% Similarity=-0.028 Sum_probs=69.8
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~ 280 (327)
++++.|+.|+|.+.|.....|++|+||... ....|. |. .+...|+||+....+|.++++|.|.
T Consensus 68 i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~-------------p~-~~~~~i~PG~~~~y~f~~~~~Gt~~ 130 (288)
T 3gdc_A 68 LWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGT-------------PG-IGAGSIAPGQSFTYEFDATPFGTHL 130 (288)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCC-------------TT-STTCSBCTTCEEEEEEECCSCEEEE
T ss_pred EEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCC-------------CC-ccceeECCCCEEEEEEEcCCCccEE
Confidence 788999999999999999999999999862 111221 11 2445789999999999999999999
Q ss_pred EEeeeh---hhhccCceEEEEEEcC
Q 020366 281 MRSAIW---ERQYLGQQFYLKVWNA 302 (327)
Q Consensus 281 ~HCHi~---~h~~~Gm~~~~~v~~~ 302 (327)
||||.. .|...||...+.|..+
T Consensus 131 yH~H~~~~~~~~~~Gl~G~liV~~~ 155 (288)
T 3gdc_A 131 YHCHQSPLAPHIAKGLYGGFIVEPK 155 (288)
T ss_dssp EECCCSSHHHHHHTTCEEEEEEECS
T ss_pred EEecCcchHHHHhCcCeEEEEEeCC
Confidence 999996 6889999999988644
No 45
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.14 E-value=2.1e-10 Score=105.42 Aligned_cols=84 Identities=13% Similarity=0.167 Sum_probs=69.1
Q ss_pred CeeEEecCCCcEEEEEEeCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC-----CCc
Q 020366 1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-----NVL 74 (327)
Q Consensus 1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-----~~~ 74 (327)
||||||++.. .+.|+|+||.|+||+.||.++ +|..++++.|+||||+||++++++ +|.|.+......-. ...
T Consensus 189 rlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~ 266 (318)
T 3g5w_A 189 RLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDG 266 (318)
T ss_dssp EEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSC
T ss_pred EEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCC
Confidence 7999999975 689999999999999999997 799999999999999999999986 68887777653211 112
Q ss_pred eeEEEEEecCCC
Q 020366 75 TATAILHYTNSH 86 (327)
Q Consensus 75 ~~~ail~y~~~~ 86 (327)
.-.++|+|.+..
T Consensus 267 Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 267 GIMTTIEYEEVG 278 (318)
T ss_dssp BSEEEEEETTTC
T ss_pred CCEEEEEECCCC
Confidence 346889998753
No 46
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.02 E-value=1.9e-10 Score=106.64 Aligned_cols=84 Identities=15% Similarity=0.115 Sum_probs=67.4
Q ss_pred CeeEEecCCCcEEEEE-EeCCeEEEEEecCccceee--EeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeE
Q 020366 1 MFRISNVGLSTSFNFR-IQGHTMKLVEVEGSHTIQN--IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTAT 77 (327)
Q Consensus 1 RlRliNa~~~~~~~~s-idgh~l~VIa~DG~~v~P~--~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ 77 (327)
|+||+|+++.+.+.|. |+||.++||+ ||.+++|. .++.+.|++||||||+|++++ +|.|++..............
T Consensus 234 rvRlin~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~~~~G~~ 311 (336)
T 1oe1_A 234 TVLLIHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEAFELGAA 311 (336)
T ss_dssp EEEEEEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCE
T ss_pred EEEEEecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhccccCCCe
Confidence 6899999988777654 5999999998 99999864 368999999999999999997 68999998764211112356
Q ss_pred EEEEecCCC
Q 020366 78 AILHYTNSH 86 (327)
Q Consensus 78 ail~y~~~~ 86 (327)
|+++|.+..
T Consensus 312 ~~~~V~~~~ 320 (336)
T 1oe1_A 312 GHIKVEGKW 320 (336)
T ss_dssp EEEEEESCC
T ss_pred EEEEECCCC
Confidence 899998654
No 47
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.97 E-value=1.7e-09 Score=82.90 Aligned_cols=84 Identities=13% Similarity=0.076 Sum_probs=63.2
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGM 278 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~ 278 (327)
.+.++.|++|+|+ |.+...|.+|+|+..+.. . .|. ... ....|++.+.+|+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~----~~~------~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD----LAK------SLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH----HHH------HHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc----cch------hccccceeeCCCCEEEEEEecCCCCce
Confidence 4788999999886 777788999999865421 0 010 000 011467788899999999988 89999
Q ss_pred eEEEeeehhhhccCceEEEEEE
Q 020366 279 WNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 279 W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
|.|||| .|..+||...+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 49999999999874
No 48
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.92 E-value=4.5e-09 Score=84.88 Aligned_cols=95 Identities=12% Similarity=0.043 Sum_probs=69.9
Q ss_pred EEecCCcEEEEEEEe--CCCCcCceeecCCC--eEEEE-ec--cC---CCCccccccCCCCCCCceeeEEeCCCCEEEEE
Q 020366 201 MQVNLHEYIEVVFQN--NEKTMQSWHLDGYD--FWVVG-YG--SG---QWAAEKRRTYNLADTLTRHTAQVYPQSWTVIL 270 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N--~~~~~HP~HLHG~~--F~Vl~-~g--~G---~~~~~~~~~~n~~~p~~rDTv~vp~~g~~vir 270 (327)
++++.|++|+|++.| .+.+.|.||++... |.-+. .+ .| .|-+. .-....+.+|..|.+|....+.
T Consensus 35 i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 35 LSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPP-----PDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp EEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC-----TTCTTEEEECCCBCTTEEEEEE
T ss_pred EEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCc-----cccccccccceeeCCCceeEEE
Confidence 688999999999999 67789999998532 21100 00 00 01000 0011346899999999999999
Q ss_pred EEecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366 271 VSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 271 f~adnpG~W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
|.++.||.|.|||++..|...||...++|.
T Consensus 110 ~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 110 FRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999889999999998874
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=98.88 E-value=1.3e-09 Score=101.09 Aligned_cols=84 Identities=15% Similarity=0.107 Sum_probs=65.0
Q ss_pred CeeEEecCCCcEEEEE-EeCCeEEEEEecCccce-ee-EeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeE
Q 020366 1 MFRISNVGLSTSFNFR-IQGHTMKLVEVEGSHTI-QN-IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTAT 77 (327)
Q Consensus 1 RlRliNa~~~~~~~~s-idgh~l~VIa~DG~~v~-P~-~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ 77 (327)
|+||+|++..+.+.|. +++|.++||+ ||.+++ |. .++++.|++||||||+|++++ +|.|+++.............
T Consensus 240 r~Rl~n~~~~~~~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h~~~Gm~ 317 (340)
T 2bw4_A 240 RVLVVHSQANRDTRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAFELGAA 317 (340)
T ss_dssp EEEEEEEESSSCBCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCE
T ss_pred EEEEEECCCCCccceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHHHhCCCE
Confidence 6789998877665555 7899999997 999986 44 589999999999999999997 69999998764211111245
Q ss_pred EEEEecCCC
Q 020366 78 AILHYTNSH 86 (327)
Q Consensus 78 ail~y~~~~ 86 (327)
++++|.+..
T Consensus 318 ~~~~V~~~~ 326 (340)
T 2bw4_A 318 GHFKVTGEW 326 (340)
T ss_dssp EEEEEESCC
T ss_pred EEEEECCCC
Confidence 889998654
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=98.88 E-value=1.4e-09 Score=100.57 Aligned_cols=84 Identities=17% Similarity=0.058 Sum_probs=63.9
Q ss_pred CeeEEecCCCcEEEE-EEeCCeEEEEEecCcccee-e-EeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeE
Q 020366 1 MFRISNVGLSTSFNF-RIQGHTMKLVEVEGSHTIQ-N-IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTAT 77 (327)
Q Consensus 1 RlRliNa~~~~~~~~-sidgh~l~VIa~DG~~v~P-~-~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ 77 (327)
|+||+|+++.+.+.| .|++|.++||+ ||.+++| . .++++.|++|||+||+|++++ +|+|++..............
T Consensus 234 r~Rl~n~~~~~~~~~h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~~~~Gm~ 311 (333)
T 1mzy_A 234 NVLFVHSQPNRDSRPHLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAVHKGAT 311 (333)
T ss_dssp EEEEEEEESSSCBCEEEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTCCE
T ss_pred EEEEEECCCCCccccEEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhHhhCCCE
Confidence 578888876554332 38999999999 9999974 4 489999999999999999997 59999988754211012356
Q ss_pred EEEEecCCC
Q 020366 78 AILHYTNSH 86 (327)
Q Consensus 78 ail~y~~~~ 86 (327)
++++|.+..
T Consensus 312 ~~~~v~~~~ 320 (333)
T 1mzy_A 312 AHVLVEGEW 320 (333)
T ss_dssp EEEEEESCC
T ss_pred EEEEEcCCC
Confidence 899998653
No 51
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.79 E-value=8.7e-09 Score=77.78 Aligned_cols=78 Identities=12% Similarity=0.038 Sum_probs=60.0
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.+.++.|++|.|+ |.+...|.+|+|+..+- +. ... ....|+..+.+|+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p----g~------~~~------~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP----AD------TAA------KLSHKGLLFAAGESFTSTF--TEPGTY 79 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC----HH------HHH------HHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC----cc------ccc------cccccccccCCCCEEEEEc--CCCeEE
Confidence 4789999999886 77778899999875421 10 000 0125788999999888877 899999
Q ss_pred EEEeeehhhhccCceEEEEE
Q 020366 280 NMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v 299 (327)
.|||+. |..+||...+.|
T Consensus 80 ~~~C~~--H~~~gM~G~i~V 97 (98)
T 1pcs_A 80 TYYCEP--HRGAGMVGKVVV 97 (98)
T ss_dssp EEECGG--GTTTTCEEEEEE
T ss_pred EEEcCC--ccccCCeEEEEE
Confidence 999995 999999999887
No 52
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.78 E-value=3.1e-08 Score=73.52 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=57.4
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.+.++.|++|.|+ |.+...|.+|+|+. + +...++..+.+|+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~~H~v~~~~~---------~--------------~~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------P--------------ELSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEETTC---------G--------------GGCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCC---------C--------------ccCcccceeCCCCEEEEEe--CCCEEE
Confidence 4789999999875 77778899999872 1 1125777888998888777 899999
Q ss_pred EEEeeehhhhccCceEEEEE
Q 020366 280 NMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v 299 (327)
.|||+. |..+||...+.|
T Consensus 73 ~~~C~~--H~~~gM~g~i~V 90 (91)
T 1bxv_A 73 TYYCEP--HRGAGMVGKIVV 90 (91)
T ss_dssp EEECTT--TGGGTCEEEEEE
T ss_pred EEEeCC--CccCCCEEEEEE
Confidence 999995 998899998876
No 53
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.78 E-value=2e-08 Score=75.68 Aligned_cols=79 Identities=18% Similarity=0.119 Sum_probs=60.5
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.+.++.|++|+| .|.+...|.+|+|+..+- .| ++. ...++|+..+.+|+...++| +.||.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p-----~~-~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGFPHNIVFDEDAIP-----SG-VNA---------DAISRDDYLNAPGETYSVKL--TAAGEY 79 (98)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEECGGGSC-----TT-CCH---------HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCC-----Cc-ccc---------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 478999999987 688778999999875320 01 100 01347889999999888877 599999
Q ss_pred EEEeeehhhhccCceEEEEE
Q 020366 280 NMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v 299 (327)
.||||. |..+||...+.|
T Consensus 80 ~y~C~~--H~~~gM~G~i~V 97 (98)
T 2plt_A 80 GYYCEP--HQGAGMVGKIIV 97 (98)
T ss_dssp EEECGG--GGGGTCEEEEEE
T ss_pred EEEcCC--ccccCCeEEEEE
Confidence 999995 999999999877
No 54
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.67 E-value=1.4e-08 Score=76.38 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=58.4
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.+.++.|++|+|+ |.+...|.+++++..+ ..|. . ....++..+.+|+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~-----~~~~------~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPA-----GESA------P------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCT-----TSCH------H------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCC-----cccc------c------cccccceecCCCCEEEEEe--CCCeEE
Confidence 3688999998876 7777889999887654 1110 0 0114667788888888877 899999
Q ss_pred EEEeeehhhhccCceEEEEE
Q 020366 280 NMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v 299 (327)
.|||+. |..+||...++|
T Consensus 79 ~y~C~~--H~~~gM~G~i~V 96 (97)
T 1b3i_A 79 SFYCTP--HRGAGMVGTITV 96 (97)
T ss_dssp EEECSS--TTTTTCEEEEEE
T ss_pred EEEccC--hhhcCCEEEEEE
Confidence 999995 999999998876
No 55
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.66 E-value=1.1e-07 Score=73.50 Aligned_cols=73 Identities=15% Similarity=0.250 Sum_probs=55.0
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.+.++.|+.|+|.+.|.+...|-|++.+. | -+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------~------------------~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------G------------------VQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------T------------------EEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------C------------------ceeEeCCCCEEEEEEECCCCEEE
Confidence 36889999999999999866454443321 1 15678999999999999999999
Q ss_pred EEEeeehhhhccCceEEEEEE
Q 020366 280 NMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
.||||+..|.. +|...++|.
T Consensus 92 ~~~C~~~~~~~-~M~g~i~V~ 111 (112)
T 1iby_A 92 TIWCQLHPKNI-HLPGTLNVV 111 (112)
T ss_dssp EEBCSSSCTTT-BCCEEEEEE
T ss_pred EEECCCCCchH-HCEEEEEEe
Confidence 99999933322 277777764
No 56
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.57 E-value=6.5e-08 Score=73.03 Aligned_cols=81 Identities=14% Similarity=0.086 Sum_probs=59.4
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.+.++.|++|+| .|.+...|.+|+++..|- .| ++.. .. ...+|++.+.+|+...+.| +.||.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~~---~~----~~~~~~~~~~~G~~~~~~f--~~~G~y 80 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDVT---KI----SMPEEDLLNAPGEEYSVTL--TEKGTY 80 (99)
T ss_dssp EEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCHH---HH----SCCTTCCBCSTTCEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-cccc---cc----cccccceeeCCCCEEEEEe--CCCcEE
Confidence 478999999877 688878999999986541 11 0000 00 1125667788898888877 599999
Q ss_pred EEEeeehhhhccCceEEEEE
Q 020366 280 NMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v 299 (327)
.|||+. |..+||...+.|
T Consensus 81 ~~~C~~--H~~~gM~G~i~V 98 (99)
T 1byp_A 81 KFYCAP--HAGAGMVGKVTV 98 (99)
T ss_dssp EEECGG--GTTTTCEEEEEE
T ss_pred EEEcCC--ccccCCEEEEEE
Confidence 999995 999999998876
No 57
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.51 E-value=4.4e-07 Score=68.66 Aligned_cols=70 Identities=13% Similarity=0.194 Sum_probs=57.4
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~ 280 (327)
++++.|+.|+|++.|.+...|-|.+.+..+ ...+.+|....+.|.++.||.|.
T Consensus 30 i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y~ 82 (100)
T 4hci_A 30 ITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTYE 82 (100)
T ss_dssp EEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEEE
T ss_pred EEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceEE
Confidence 789999999999999988877776544322 12456778888999999999999
Q ss_pred EEeeehhhhccCceEEEEE
Q 020366 281 MRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 281 ~HCHi~~h~~~Gm~~~~~v 299 (327)
|+|.. |..+||...++|
T Consensus 83 y~C~~--H~~~gM~G~i~V 99 (100)
T 4hci_A 83 LICRY--HLLKGMEGKVIV 99 (100)
T ss_dssp EECTT--TGGGTCEEEEEE
T ss_pred EECcc--ccCCCCEEEEEE
Confidence 99987 998999888876
No 58
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=98.47 E-value=2.4e-07 Score=83.24 Aligned_cols=87 Identities=17% Similarity=0.234 Sum_probs=68.1
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC----
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN---- 275 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn---- 275 (327)
+++++.|+.|++.+.|.....+.+|+||..+.- ...|. | ...-.|+||+..+-+|.++.
T Consensus 37 ~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~-------------~--~t~~~i~pG~~~~Y~f~~~~~~~~ 99 (276)
T 3kw8_A 37 LIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGT-------------A--MNKSDVEPGGTRTYTWRTHKPGRR 99 (276)
T ss_dssp CEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCC-------------T--TTTCSBCTTCEEEEEEECCCCEEC
T ss_pred eEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCC-------------c--CCcCCCCCCCEEEEEEEcCCcccc
Confidence 478999999999999998889999999998632 11221 1 11235789999999999975
Q ss_pred ---------CeeeEEEeeeh------hhhccCceEEEEEEcCc
Q 020366 276 ---------QGMWNMRSAIW------ERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 276 ---------pG~W~~HCHi~------~h~~~Gm~~~~~v~~~~ 303 (327)
+|.|+||||.. .+...||...+.|..+.
T Consensus 100 ~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 142 (276)
T 3kw8_A 100 DDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 142 (276)
T ss_dssp TTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred ccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCC
Confidence 58999999983 57889999999886543
No 59
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.43 E-value=4.6e-07 Score=68.64 Aligned_cols=84 Identities=14% Similarity=-0.003 Sum_probs=58.1
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCc-eeeEEeCCCCEEEEEEEecCCe
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLT-RHTAQVYPQSWTVILVSLDNQG 277 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~-rDTv~vp~~g~~virf~adnpG 277 (327)
..++++.|++|+|+ |.+...|.++++.-... .+.+.... . .+.+ .+++.+.+|+...+.| +.||
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~-----~-~~~~~~~~~~~~pG~~~~~tf--~~~G 81 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL-----K-AASMDENDLLSEDEPSFKAKV--STPG 81 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH-----H-HTSCCTTCCBBTTBCEEEECC--CSCE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh-----h-cccccccceecCCCCEEEEEe--CCCe
Confidence 34789999999875 77778899998731100 00000000 0 0222 3667788888888877 8999
Q ss_pred eeEEEeeehhhhccCceEEEEE
Q 020366 278 MWNMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 278 ~W~~HCHi~~h~~~Gm~~~~~v 299 (327)
.|.|||+. |..+||...++|
T Consensus 82 ~y~y~C~~--H~~~gM~G~i~V 101 (102)
T 1kdj_A 82 TYTFYCTP--HKSANMKGTLTV 101 (102)
T ss_dssp EEEEECST--TGGGTCEEEEEE
T ss_pred EEEEEeCC--CcccCCeEEEEE
Confidence 99999995 999999999887
No 60
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=98.40 E-value=2e-07 Score=93.57 Aligned_cols=61 Identities=11% Similarity=0.120 Sum_probs=53.6
Q ss_pred CeeEEecCCCc-EEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe
Q 020366 1 MFRISNVGLST-SFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST 67 (327)
Q Consensus 1 RlRliNa~~~~-~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~ 67 (327)
||||||++... .+.|+|+||.|+||+.||. .++.+.|+||||+||++++++ +|.|.+....
T Consensus 250 rlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~v~~~~~~-pG~w~~hch~ 311 (647)
T 1sdd_B 250 RLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKTLEMKASK-PGWWLLDTEV 311 (647)
T ss_dssp EEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEECTTEEEEEEEECCS-SEEEEEECCC
T ss_pred EEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEECCCeEEEEEEEecc-ceEeecccCc
Confidence 79999999864 8999999999999999864 689999999999999999987 5877766654
No 61
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=98.31 E-value=1e-06 Score=81.57 Aligned_cols=86 Identities=17% Similarity=0.246 Sum_probs=66.8
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC---
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ--- 276 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp--- 276 (327)
++.++.|+.|+|.+.|.....+.+|.||..+.. .. .|. | -+...|+||+....+|.++.|
T Consensus 78 ~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~-~~-DG~-------------~--~t~~~I~PG~~~~y~f~~~~pg~~ 140 (343)
T 3cg8_A 78 LIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI-SS-DGT-------------A--MNKSDVEPGGTRTYTWRTHKPGRR 140 (343)
T ss_dssp CEEEETTCEEEEEEEECSSSCBCCEESSSBCCG-GG-SCC-------------T--TTTCSBCTTCEEEEEEECCCCEEC
T ss_pred EEEEECCCEEEEEEEECCCCCeeEEecCcccCC-cC-CCc-------------c--cccccccCCCEEEEEEEeCCCCcc
Confidence 488999999999999998888889999998761 22 231 1 123357899999999998765
Q ss_pred ----------eeeEEEeee------hhhhccCceEEEEEEcC
Q 020366 277 ----------GMWNMRSAI------WERQYLGQQFYLKVWNA 302 (327)
Q Consensus 277 ----------G~W~~HCHi------~~h~~~Gm~~~~~v~~~ 302 (327)
|.|+||||. ..+...||...+.|..+
T Consensus 141 ~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~ 182 (343)
T 3cg8_A 141 DDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 182 (343)
T ss_dssp TTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT
T ss_pred cccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecC
Confidence 789999996 35678899888877543
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=98.31 E-value=2.4e-06 Score=84.17 Aligned_cols=88 Identities=15% Similarity=0.066 Sum_probs=67.7
Q ss_pred EEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 201 MQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
++++.|++|++.+.|.-. ..+.+|.||.... +.+..+.. |.. ---.|+||+..+-+|.++.+|.|
T Consensus 36 I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~----~~~~~DGv---------~~v-tq~~I~PG~s~tY~f~~~~~GT~ 101 (552)
T 1aoz_A 36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQR----GTPWADGT---------ASI-SQCAINPGETFFYNFTVDNPGTF 101 (552)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEEETCCCT----TCGGGSCC---------BTT-TBCCBCTTCEEEEEEECCSCEEE
T ss_pred EEEeCCCEEEEEEEeCCCCCCeeEEeCCCccC----CCcccCCC---------ccc-ccCCcCCCCeEEEEEECCCCEEE
Confidence 788999999999999886 8899999997631 11000100 000 01247899999999999999999
Q ss_pred EEEeeehhhhccCceEEEEEEcC
Q 020366 280 NMRSAIWERQYLGQQFYLKVWNA 302 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v~~~ 302 (327)
.||||...+...||...+.|..+
T Consensus 102 wYHsH~~~q~~~Gl~G~liV~~~ 124 (552)
T 1aoz_A 102 FYHGHLGMQRSAGLYGSLIVDPP 124 (552)
T ss_dssp EEEECSTTTGGGTCEEEEEEECC
T ss_pred EEEECchhHHhccCeeeEEEeCC
Confidence 99999988889999999988755
No 63
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=98.27 E-value=1.4e-06 Score=79.72 Aligned_cols=88 Identities=16% Similarity=0.207 Sum_probs=65.0
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC--
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ-- 276 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp-- 276 (327)
++++++.|++|+|.+.|.....+.+|.||.++-- ...|. |. ..-.|+||+..+-+|++..|
T Consensus 42 P~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~--~~dG~-------------~~--~~~~i~PG~~~~Y~~~~~~P~~ 104 (313)
T 3tas_A 42 PLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEI--SSDGT-------------KQ--SRSDVEPGGTRTYTWRTHVPGR 104 (313)
T ss_dssp CCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCS-------------TT--TTCCBCTTCEEEEEEBCCCCEE
T ss_pred CeEEEECCCEEEEEEEECCCCCccEeecCCcCCc--cCCCC-------------cc--ccCCcCCCCEEEEEEEeccCCc
Confidence 3488999999999999998889999999987521 11221 11 11237899999999987654
Q ss_pred -----------eeeEEEeeehh------hhccCceEEEEEEcCc
Q 020366 277 -----------GMWNMRSAIWE------RQYLGQQFYLKVWNAV 303 (327)
Q Consensus 277 -----------G~W~~HCHi~~------h~~~Gm~~~~~v~~~~ 303 (327)
|.|.||||... +...||...+.|..+.
T Consensus 105 ~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 148 (313)
T 3tas_A 105 RADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 148 (313)
T ss_dssp CTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred cccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccc
Confidence 89999999732 3467999998886543
No 64
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.27 E-value=1.4e-06 Score=65.66 Aligned_cols=82 Identities=16% Similarity=0.081 Sum_probs=58.3
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
..+.++.|++|+| .|.+...|.+++++..+- . | .+.. .. ...++.+.+.+|+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p---~--~-~~~~---~~----~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP---S--G-VDAS---KI----SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC---T--T-CCHH---HH----CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc---c--c-cccc---cc----ccccCccccCCCCEEEEEE--CCCce
Confidence 3478999999887 688778999999875431 0 1 0000 00 1123556778888887776 69999
Q ss_pred eEEEeeehhhhccCceEEEEE
Q 020366 279 WNMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 279 W~~HCHi~~h~~~Gm~~~~~v 299 (327)
|.|||+. |..+||...+.|
T Consensus 80 y~~~C~~--H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCSP--HQGAGMVGKVTV 98 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEE
T ss_pred EEEEcCC--CcccCCEEEEEE
Confidence 9999995 999999998876
No 65
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.25 E-value=3.1e-06 Score=83.43 Aligned_cols=88 Identities=15% Similarity=0.031 Sum_probs=66.7
Q ss_pred EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCC-CCEEEEEEEecCCee
Q 020366 201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYP-QSWTVILVSLDNQGM 278 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~-~g~~virf~adnpG~ 278 (327)
++++.|+.|++.+.|.. ...+.+|.||....--....|. |.. ---.|+| |+..+-+|.++.+|.
T Consensus 69 i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~-------------~~~-tq~~I~P~G~~~~Y~f~~~q~GT 134 (559)
T 2q9o_A 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA-------------NGV-TECPIPPKGGQRTYRWRARQYGT 134 (559)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC-------------BTT-TBCCBCTTTEEEEEEEECCSCEE
T ss_pred EEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC-------------Ccc-ccCccCCCCCeEEEEEECCCCEE
Confidence 78899999999999987 5689999999763100000110 000 0013788 999999999999999
Q ss_pred eEEEeeehhhhccCceEEEEEEcC
Q 020366 279 WNMRSAIWERQYLGQQFYLKVWNA 302 (327)
Q Consensus 279 W~~HCHi~~h~~~Gm~~~~~v~~~ 302 (327)
|.||||...+...||..++.|.++
T Consensus 135 ~wYH~H~~~q~~~Gl~G~liV~~~ 158 (559)
T 2q9o_A 135 SWYHSHFSAQYGNGVVGTIQINGP 158 (559)
T ss_dssp EEEEECSTTGGGGTCEEEEEEECC
T ss_pred EEEEEcccchhcCCceEEEEecCC
Confidence 999999988899999999988754
No 66
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.22 E-value=4e-06 Score=81.62 Aligned_cols=89 Identities=11% Similarity=0.067 Sum_probs=66.8
Q ss_pred EEecCCcEEEEEEEeCCC-----CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEE-ec
Q 020366 201 MQVNLHEYIEVVFQNNEK-----TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVS-LD 274 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~-----~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~-ad 274 (327)
++++.|+.|++.+.|.-. ..+.+|.||.+. .+....+.. |.. ---.|+||+..+-+|. ++
T Consensus 36 i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~----~~~~~~DGv---------~~v-tq~~I~PG~~~~Y~f~~~~ 101 (503)
T 1hfu_A 36 IRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQ----RGTNWADGA---------DGV-NQCPISPGHAFLYKFTPAG 101 (503)
T ss_dssp EEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCC----TTCGGGSCC---------BTT-TBCCBCTTCEEEEEECCTT
T ss_pred EEEeCCCEEEEEEEeCCCCccCCCcccEeccceec----cCCCccCCC---------ccc-ccCCcCCCCeEEEEEEeCC
Confidence 678899999999999876 789999999763 110000000 000 0013789999999999 68
Q ss_pred CCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366 275 NQGMWNMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 275 npG~W~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
.+|.+.||||...+...||...+.|.++.
T Consensus 102 ~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 102 HAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCccEEEEecchhhhhCcceeeEEEcCCC
Confidence 89999999999888889999999987654
No 67
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=98.20 E-value=2.5e-06 Score=81.64 Aligned_cols=76 Identities=13% Similarity=0.239 Sum_probs=65.7
Q ss_pred EEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 200 VMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
.+.++.| +++|.|.|.+. ..|.||++||.|+|++.+.+. +..|...|++.|.+|+.+.|-+.++++|.
T Consensus 189 ~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~----------~~~p~~~~~l~l~pgeR~dv~v~~~~~G~ 257 (439)
T 2xu9_A 189 TLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGF----------LEEPLEVSELLLAPGERAEVLVRLRKEGR 257 (439)
T ss_dssp EEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEE----------EEEEEEESCEEECTTCEEEEEEECCSSEE
T ss_pred cEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCC----------CCCceEeceEEECCceeEEEEEEcCCCce
Confidence 4678999 99999999975 469999999999999997431 22467889999999999999999999999
Q ss_pred eEEEeeeh
Q 020366 279 WNMRSAIW 286 (327)
Q Consensus 279 W~~HCHi~ 286 (327)
|.++|+..
T Consensus 258 ~~l~~~~~ 265 (439)
T 2xu9_A 258 FLLQALPY 265 (439)
T ss_dssp EEEEEECC
T ss_pred EEEEeccc
Confidence 99999863
No 68
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.19 E-value=5.5e-06 Score=81.00 Aligned_cols=83 Identities=14% Similarity=0.133 Sum_probs=67.1
Q ss_pred EEecCCcEEEEEEEeCCC-----CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceee------EEeCCCCEEEE
Q 020366 201 MQVNLHEYIEVVFQNNEK-----TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHT------AQVYPQSWTVI 269 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~-----~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDT------v~vp~~g~~vi 269 (327)
++++.|+.|++.+.|.-. ..+-+|.||.... + +.+-|- -.|+||+..+-
T Consensus 57 i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~------~--------------~~~~DGv~~vtq~~I~PG~s~~Y 116 (521)
T 1v10_A 57 ITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQA------G--------------TTEMDGPAFVNQCPIIPNESFVY 116 (521)
T ss_dssp EEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCT------T--------------CGGGSCCBTTTBCCBCTTEEEEE
T ss_pred EEEeCCCEEEEEEEECCCCccCCCCceEecCCeecc------C--------------CCccCCCcceeeCCcCCCCeEEE
Confidence 788999999999999877 7899999998731 1 011111 13789999999
Q ss_pred EEE-ecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366 270 LVS-LDNQGMWNMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 270 rf~-adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
+|. ++.+|.+.||||...+...||...+.|.++.
T Consensus 117 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 117 DFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 999 6889999999999888889999999987654
No 69
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.19 E-value=3.7e-06 Score=76.37 Aligned_cols=88 Identities=17% Similarity=0.171 Sum_probs=65.2
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec----
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD---- 274 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad---- 274 (327)
++++++.|++|+|.+.|.....+.+|.||..+. ....|. |.-. -.|+||+..+-+|++.
T Consensus 58 P~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~-------------~~~~--~~i~PG~t~~Y~~~~~~~~~ 120 (299)
T 3t9w_A 58 PVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGT-------------LMNG--SAVMPGQTRRYTWRSHVGYR 120 (299)
T ss_dssp CCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCC-------------TTTT--CCBCTTCEEEEEEBCCCCEE
T ss_pred ceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCC-------------cccc--CccCCCCeEEEEEEeecccc
Confidence 348899999999999999888999999998642 111221 1101 1378899999999875
Q ss_pred ---------CCeeeEEEeeehh------hhccCceEEEEEEcCc
Q 020366 275 ---------NQGMWNMRSAIWE------RQYLGQQFYLKVWNAV 303 (327)
Q Consensus 275 ---------npG~W~~HCHi~~------h~~~Gm~~~~~v~~~~ 303 (327)
.+|.|.||||... +...||...+.|..+.
T Consensus 121 ~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~ 164 (299)
T 3t9w_A 121 RADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG 164 (299)
T ss_dssp CTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred cCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccc
Confidence 5699999999732 4567999999886543
No 70
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=98.17 E-value=2.8e-06 Score=77.47 Aligned_cols=93 Identities=15% Similarity=0.076 Sum_probs=68.0
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCC--CceeeEEeCCCCEEEEEEEecCC-
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADT--LTRHTAQVYPQSWTVILVSLDNQ- 276 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p--~~rDTv~vp~~g~~virf~adnp- 276 (327)
++.++.|++|+|.+.|.....+.+|.||..+-. + ..|.. + .+++ ..++...|+||+....+|.++.+
T Consensus 61 ~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~-~-~dG~~-------~-~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~ 130 (306)
T 1sdd_A 61 TLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSK-F-SEGAS-------Y-SDHTLPMEKMDDAVAPGQEYTYEWIISEHS 130 (306)
T ss_dssp CEEEETTCEEEEEEEECSSSCBCCEEESSCCCT-T-TSCCC-------S-CCCCCHHHHTTTCBCTTCEEEEEEECCGGG
T ss_pred EEEEeCCCEEEEEEEECCCCcccEeecceeccc-c-cCCCc-------c-CCCCcccccCCCccCCCCeEEEEEEeCCcc
Confidence 488999999999999988888999999998422 1 12210 0 0111 12223568899999999999654
Q ss_pred ---------eeeEEEeeehh--hhccCceEEEEEEcC
Q 020366 277 ---------GMWNMRSAIWE--RQYLGQQFYLKVWNA 302 (327)
Q Consensus 277 ---------G~W~~HCHi~~--h~~~Gm~~~~~v~~~ 302 (327)
|.|.||||... +...||...+.|..+
T Consensus 131 gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~ 167 (306)
T 1sdd_A 131 GPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK 167 (306)
T ss_dssp SCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECT
T ss_pred CCCCCCCCceEEEEeccCCchhhhccCceEEEEEccC
Confidence 89999999755 557899888887644
No 71
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=98.12 E-value=1.5e-05 Score=77.46 Aligned_cols=90 Identities=13% Similarity=0.139 Sum_probs=66.9
Q ss_pred EEecCCcEEEEEEEeCCC-----CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-c
Q 020366 201 MQVNLHEYIEVVFQNNEK-----TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-D 274 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~-----~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-d 274 (327)
++++.|++|++.+.|.-. ..+-+|.||....--....| ++.----.|+||+..+-+|.+ +
T Consensus 36 I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG--------------v~~vtq~pI~PG~s~tY~f~~~~ 101 (499)
T 3pxl_A 36 VAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADG--------------PAFINQCPISPGHSFLYDFQVPD 101 (499)
T ss_dssp EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSC--------------CBTTTBCCBCTTCEEEEEEECSS
T ss_pred EEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccC--------------CCccccCCCCCCCeEEEEEEcCC
Confidence 788999999999999865 36899999986321000011 000000147899999999999 7
Q ss_pred CCeeeEEEeeehhhhccCceEEEEEEcCcc
Q 020366 275 NQGMWNMRSAIWERQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 275 npG~W~~HCHi~~h~~~Gm~~~~~v~~~~~ 304 (327)
.+|.+.||||...+...||...+.|.++.+
T Consensus 102 ~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~ 131 (499)
T 3pxl_A 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPND 131 (499)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred CCceeeeeccchhHHhccceeEEEEcCCcc
Confidence 899999999998888899999999876543
No 72
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.11 E-value=1.8e-05 Score=76.79 Aligned_cols=85 Identities=15% Similarity=0.041 Sum_probs=67.4
Q ss_pred EEEecCCcEEEEEEEeCCCC-----cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeE------EeCCCCEEE
Q 020366 200 VMQVNLHEYIEVVFQNNEKT-----MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTA------QVYPQSWTV 268 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~-----~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv------~vp~~g~~v 268 (327)
+++++.|+.|++.+.|.-.. .+-+|.||.... + +.|-|-+ .|+||+..+
T Consensus 36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~------~--------------~~~~DGv~~vtq~pI~PG~sft 95 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQK------G--------------TNWADGPAFITQCPIIVGNSFS 95 (495)
T ss_dssp EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT------T--------------CGGGSCCBTTTBCCBCTTCEEE
T ss_pred eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccC------C--------------CccccCCCccccCCCCCCCeEE
Confidence 47889999999999998653 688999998732 1 1112211 478999999
Q ss_pred EEEEe-cCCeeeEEEeeehhhhccCceEEEEEEcCcc
Q 020366 269 ILVSL-DNQGMWNMRSAIWERQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 269 irf~a-dnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~ 304 (327)
-+|.+ +.+|.+.||||...+...||...+.|.++.+
T Consensus 96 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~ 132 (495)
T 3t6v_A 96 YNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPND 132 (495)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred EEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccc
Confidence 99999 7899999999998888899999999876543
No 73
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.08 E-value=1.9e-05 Score=64.51 Aligned_cols=82 Identities=13% Similarity=0.095 Sum_probs=58.2
Q ss_pred EEEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceee-------EEeCCCC--EEEE
Q 020366 200 VMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHT-------AQVYPQS--WTVI 269 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDT-------v~vp~~g--~~vi 269 (327)
.++++.|+.|.|++.|.+ ...|-+-++. .+. .+.. .|...+. ..|.||+ ...+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~-------~~~-~~~~---------~~~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITK-------KGP-PYAV---------MPVIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEES-------CCS-CCCS---------SCCCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEee-------cCc-chhc---------cccccccccccccccccCCCCceEEEE
Confidence 478999999999999974 4555544442 221 1110 0111111 1567888 8899
Q ss_pred EEEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366 270 LVSLDNQGMWNMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 270 rf~adnpG~W~~HCHi~~h~~~Gm~~~~~v 299 (327)
.|.+ .||.+.||||+..|..+||-..++|
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 9999 9999999999988999999998876
No 74
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.08 E-value=1.3e-05 Score=78.66 Aligned_cols=89 Identities=17% Similarity=0.130 Sum_probs=67.6
Q ss_pred EEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec-CCee
Q 020366 201 MQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD-NQGM 278 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad-npG~ 278 (327)
++++.|+.|++.+.|.-. ..+.+|.||.+...-....|. |.. ---.|+||+..+-+|.++ .+|.
T Consensus 36 i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~-------------~~v-tq~pI~PG~~~~Y~f~~~~~~GT 101 (534)
T 1zpu_A 36 ITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGV-------------PFL-TQCPIAPGSTMLYNFTVDYNVGT 101 (534)
T ss_dssp EEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCC-------------BTT-TBCCBCTTCEEEEEEECSSCCEE
T ss_pred EEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCC-------------Ccc-ccCCcCCCCeEEEEEEeCcccee
Confidence 788999999999999876 889999999773210000110 000 001378999999999998 9999
Q ss_pred eEEEeeehhhhccCceEEEEEEcCc
Q 020366 279 WNMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 279 W~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
+.||||...+...||...+.|.++.
T Consensus 102 ~wYH~H~~~q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 102 YWYHSHTDGQYEDGMKGLFIIKDDS 126 (534)
T ss_dssp EEEECCSSSGGGGTCEEEEEEECTT
T ss_pred EEEEEcCcccccCcceeeEEeCCCC
Confidence 9999999888899999999887553
No 75
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.07 E-value=1.6e-05 Score=78.46 Aligned_cols=89 Identities=13% Similarity=-0.021 Sum_probs=67.4
Q ss_pred EEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 201 MQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
++++.|+.|++.+.|.-. ...-+|.||.... +. .|.... |.. ---.|+||+..+-+|.++.+|.+
T Consensus 100 I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~----~t-~~~DGv--------p~v-Tq~pI~PG~sftY~f~~~q~GT~ 165 (580)
T 3sqr_A 100 IIADWGDNLIIHVTNNLEHNGTSIHWHGIRQL----GS-LEYDGV--------PGV-TQCPIAPGDTLTYKFQVTQYGTT 165 (580)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEETTCCCT----TC-GGGSCC--------BTT-TBCCBCTTCEEEEEEECCCCEEE
T ss_pred EEEeCCCEEEEEEEECCCCCcceEEecccccC----CC-ccccCC--------Ccc-ccCCCCCCCeEEEEEECCCCcce
Confidence 788999999999999876 6799999998631 10 110000 000 00137899999999999999999
Q ss_pred EEEeeehhhhccCceEEEEEEcCc
Q 020366 280 NMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
.||||...+...||...+.|.++.
T Consensus 166 WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 166 WYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEeecccccccCcCEEEEEeeCcc
Confidence 999999888889999999887553
No 76
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=98.07 E-value=5e-06 Score=79.81 Aligned_cols=85 Identities=13% Similarity=0.100 Sum_probs=68.3
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC-Cee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN-QGM 278 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn-pG~ 278 (327)
+++++.|+.|++.+.|.-...+.+|.||.... ....|. | --.|+||+..+-+|.++. +|.
T Consensus 51 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~-------------~----~~~i~PG~~~~Y~f~~~~~~GT 111 (451)
T 2uxt_A 51 TIRVWKGDDVKLIYSNRLTENVSMTVAGLQVP--GPLMGG-------------P----ARMMSPNADWAPVLPIRQNAAT 111 (451)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCC--GGGSCS-------------G----GGCBCTTCEECCEEECCSCSEE
T ss_pred eEEEeCCCEEEEEEEECCCCCccEEECCccCC--CCCCCC-------------C----cCcCCCCCeEEEEEEcCCCCcc
Confidence 47889999999999999888999999997732 111120 1 135789999999999987 999
Q ss_pred eEEEeee----hhhhccCceEEEEEEcCc
Q 020366 279 WNMRSAI----WERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 279 W~~HCHi----~~h~~~Gm~~~~~v~~~~ 303 (327)
|.||||. ..+...||..++.|.++.
T Consensus 112 ~wYH~H~~~~t~~q~~~Gl~G~liV~~~~ 140 (451)
T 2uxt_A 112 LWYHANTPNRTAQQVYNGLAGMWLVEDEV 140 (451)
T ss_dssp EEEEECCTTTHHHHHHTTCEEEEEEECHH
T ss_pred eEEecCCCCchhhhHhhcceEEEEEecCc
Confidence 9999998 667889999999987554
No 77
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.06 E-value=1.7e-05 Score=60.30 Aligned_cols=70 Identities=10% Similarity=0.087 Sum_probs=50.2
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~ 280 (327)
+.++.|+.|+|+ |.+...|-+|.|+.. .|. +.+ ++-.+.+|+...+.| +.||.+.
T Consensus 35 i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf--~~~G~y~ 89 (105)
T 2ov0_A 35 LHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF--TEAGTYD 89 (105)
T ss_dssp EEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEEE
T ss_pred EEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEEE
Confidence 688999999885 877788999988522 121 001 122366777766666 8999999
Q ss_pred EEeeehhhhccCceEEEEE
Q 020366 281 MRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 281 ~HCHi~~h~~~Gm~~~~~v 299 (327)
|||++ |. ||...+.|
T Consensus 90 y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 90 YHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EECSS--CT--TCEEEEEE
T ss_pred EEeCC--CC--CCEEEEEE
Confidence 99998 65 88888776
No 78
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.04 E-value=2e-05 Score=77.48 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=59.3
Q ss_pred eEEEecCCcEEEEEEEeCCC---CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC
Q 020366 199 SVMQVNLHEYIEVVFQNNEK---TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN 275 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~---~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn 275 (327)
..+.++.|+.|+|.+.|.+. ..|.|+++++.+. ..+.||+...++|.++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 45789999999999999753 4788888875321 35777888899999999
Q ss_pred CeeeEEEeeeh-hhhccCceEEEEEEc
Q 020366 276 QGMWNMRSAIW-ERQYLGQQFYLKVWN 301 (327)
Q Consensus 276 pG~W~~HCHi~-~h~~~Gm~~~~~v~~ 301 (327)
||.|.||||.. ...|.||...+.|..
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p 592 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEP 592 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEc
Confidence 99999999931 123459999998864
No 79
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=97.99 E-value=1.2e-05 Score=77.06 Aligned_cols=86 Identities=12% Similarity=0.109 Sum_probs=68.5
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec-CCee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD-NQGM 278 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad-npG~ 278 (327)
+++++.|+.|++.+.|.-...+-+|.||...- ....|. |. -.|+||+..+-+|.++ .+|.
T Consensus 39 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~-------------~~----~~i~PG~~~~Y~f~~~~~~GT 99 (448)
T 3aw5_A 39 TIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAH-------------PS----FAITPGESYNYSFDVVNRAGT 99 (448)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTC-------------GG----GCBCTTCEEEEEEECCSCSEE
T ss_pred eEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCC-------------CC----ccCCCCCEEEEEEEcCCCCCc
Confidence 37889999999999999888999999998731 111120 11 3578999999999998 7999
Q ss_pred eEEEee----ehhhhccCceEEEEEEcCcc
Q 020366 279 WNMRSA----IWERQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 279 W~~HCH----i~~h~~~Gm~~~~~v~~~~~ 304 (327)
+.|||| ...+...||...+.|.++.+
T Consensus 100 ~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~ 129 (448)
T 3aw5_A 100 YLYHPHPHGLTAKQFYMGQLGLVIVEDSGS 129 (448)
T ss_dssp EEEEECCTTTHHHHHHTTCCEEEEEECTTT
T ss_pred eEeccCCCCchHHHHhccceEEEEEeCCcc
Confidence 999999 66778899999998876543
No 80
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=97.93 E-value=2e-05 Score=76.15 Aligned_cols=86 Identities=10% Similarity=0.088 Sum_probs=67.5
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC-ee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ-GM 278 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp-G~ 278 (327)
++.++.|+.|++.+.|.-...+.+|+||...- ....|. | --.|+||+...-+|.++.| |.
T Consensus 49 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~-------------p----~~~i~PG~~~~Y~f~~~~~aGT 109 (488)
T 3od3_A 49 AVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGG-------------P----QGIIPPGGKRSVTLNVDQPAAT 109 (488)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCC-------------T----TCCBCTTCEEEEEEECCSCSEE
T ss_pred eEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCC-------------C----cCcCcCCCeEEEEEecCCCcee
Confidence 47889999999999999888999999999742 111121 1 1257899999999999885 99
Q ss_pred eEEEeee----hhhhccCceEEEEEEcCcc
Q 020366 279 WNMRSAI----WERQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 279 W~~HCHi----~~h~~~Gm~~~~~v~~~~~ 304 (327)
+.||||. ..+...||...+.|.++.+
T Consensus 110 ~wYH~H~~~~t~~q~~~GL~G~liV~~~~~ 139 (488)
T 3od3_A 110 CWFHPHQHGKTGRQVAMGLAGLVVIEDDEI 139 (488)
T ss_dssp EEEECCCTTTHHHHHHTTCCEEEEEECHHH
T ss_pred EEEEecCCCcchhhhhccceeEEEEcCccc
Confidence 9999997 4567789999998875543
No 81
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=97.91 E-value=2.2e-05 Score=75.80 Aligned_cols=85 Identities=11% Similarity=0.135 Sum_probs=67.0
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC--Cee
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN--QGM 278 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn--pG~ 278 (327)
++++.|+.|++.+.|.-...+.+|+||... -....|. | --.|+||+..+-+|.++. +|.
T Consensus 84 Ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~-------------p----q~~I~PG~s~~Y~f~~~~~~~GT 144 (481)
T 3zx1_A 84 IEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGS-------------P----HDPILAGEERIYRFEIPQDSAGT 144 (481)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCC-------------T----TSCBCTTCEEEEEEECCTTCCEE
T ss_pred EEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCC-------------c----cCcCCCCCeEEEEEeCCCCCCce
Confidence 788999999999999988899999999973 1111120 1 125789999999999976 799
Q ss_pred eEEEeee----hhhhccCceEEEEEEcCcc
Q 020366 279 WNMRSAI----WERQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 279 W~~HCHi----~~h~~~Gm~~~~~v~~~~~ 304 (327)
+.||||. ..+...||...+.|.++.+
T Consensus 145 ~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~ 174 (481)
T 3zx1_A 145 YWYHPHPHYTASKQVFMGLAGAFVIKAKKD 174 (481)
T ss_dssp EEEECCCTTTHHHHHHTTCCEEEEEECSSC
T ss_pred EEEeecCCCcchhhhhccceEEEEEcCccc
Confidence 9999996 4577889999998876543
No 82
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=97.74 E-value=5.6e-05 Score=74.00 Aligned_cols=87 Identities=20% Similarity=0.083 Sum_probs=65.5
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC-e
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ-G 277 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp-G 277 (327)
++++++.|+.|++.+.|.....+.+|.||.... ....|. ..+ .|+||+..+-+|.++.+ |
T Consensus 69 PtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~----------~~~-------~i~PG~~~~Y~f~~~~~~G 129 (534)
T 3abg_A 69 PTFQVPRGVETVVRFINNAEAPNSVHLHGSFSR--AAFDGW----------AED-------ITEPGSFKDYYYPNRQSAR 129 (534)
T ss_dssp EEEEEETTCCEEEEEEECSSSCBCEEEETCCCC--TTTTTC----------SSS-------CBSSCSCCCEEECCCSSSC
T ss_pred ceEEEeCCcEEEEEEEECCCCCceEEECCCcCC--CCCCCC----------CCC-------CCCCCCeEEEEEecCCcce
Confidence 457899999999999999888999999998621 111120 011 27899999999999875 7
Q ss_pred eeEEEeeehh----hhccCceEEEEEEcCcc
Q 020366 278 MWNMRSAIWE----RQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 278 ~W~~HCHi~~----h~~~Gm~~~~~v~~~~~ 304 (327)
.+.||||... +...||..++.|.++.+
T Consensus 130 T~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~ 160 (534)
T 3abg_A 130 TLWYHDHAMHITAENAYRGQAGLYMLTDPAE 160 (534)
T ss_dssp EEEEEECCTTCHHHHHHTBCEEEEEEECTTT
T ss_pred eEEEecCccccchhhhhhcceEEEEEECCcc
Confidence 9999999942 45689999998876543
No 83
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=97.70 E-value=1.6e-05 Score=81.07 Aligned_cols=89 Identities=15% Similarity=0.088 Sum_probs=68.7
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec----
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD---- 274 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad---- 274 (327)
+++.++.|++|++.+.|.....+.+|.||..+..-.. .|. |.- --.|+||+..+-+|.+.
T Consensus 199 P~Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~-------------~~~--~~~I~PG~~~tY~f~~~~~~g 262 (770)
T 2r7e_B 199 PYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR-QGA-------------EPR--KNFVKPNETKTYFWKVQHHMA 262 (770)
T ss_dssp CCCCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCSS-SCT-------------TTT--SSCCCSSCEEEEECCCCSSSS
T ss_pred CeEEEEcCCEEEEEEEECCCCCcceeecccccccccC-CCC-------------cCc--cCccCCCCeEEEEEEecCccC
Confidence 4578899999999999998889999999998643221 121 110 12478999999999987
Q ss_pred ------CCeeeEEEeeehh--hhccCceEEEEEEcCc
Q 020366 275 ------NQGMWNMRSAIWE--RQYLGQQFYLKVWNAV 303 (327)
Q Consensus 275 ------npG~W~~HCHi~~--h~~~Gm~~~~~v~~~~ 303 (327)
.+|.|.||||... +...||...+.|..+.
T Consensus 263 p~~~d~~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 263 PTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp CCSSCCSEEEEEECCCSSSSHHHHTSCCEEEEEECST
T ss_pred CccCCCCCeeEEeeccCCcHHHHhCCceeeEEECCCc
Confidence 7899999999955 5678999999886543
No 84
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.62 E-value=0.00011 Score=57.57 Aligned_cols=75 Identities=9% Similarity=0.047 Sum_probs=50.8
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.++++.|++|.|++.|. .|-+..+. +.+.. . .+.+.+.+++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~P~-g-----------~~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIK----------EILPE-G-----------VESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECT----------TSSCT-T-----------CCCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcC----------CcCCC-C-----------ccceecCCCCEEEEEe--CCCeEE
Confidence 37899999999998773 34443331 11110 0 0111234677666666 899999
Q ss_pred EEEeeehhhhccCceEEEEEEcCc
Q 020366 280 NMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
.|+|-. |..+||-..++|.++.
T Consensus 75 ~y~C~~--H~~~GM~G~I~V~~~~ 96 (123)
T 3erx_A 75 GVKCTP--HFGMGMVGLVQVGDAP 96 (123)
T ss_dssp EEECGG--GTTTTCEEEEEESSSC
T ss_pred EEEeCC--CCcCCcEEEEEECCCC
Confidence 999997 9999999999998633
No 85
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.60 E-value=6.3e-05 Score=59.26 Aligned_cols=75 Identities=12% Similarity=0.046 Sum_probs=49.7
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.++++.|++|.|++.|. .|-+..+. +.+.. -...+.+.+++...+.| +.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~----------~~~P~------------g~~~f~s~pGet~s~TF--~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMK----------GGAPE------------GAETWKGKINEEITVTL--SKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECT----------TCSCT------------TCCCCBCCTTCCCEEEC--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcc----------CcCCC------------CccceecCCCCEEEEEe--CCCeEE
Confidence 47899999999887663 34433321 11100 00111224566655555 899999
Q ss_pred EEEeeehhhhccCceEEEEEEcCc
Q 020366 280 NMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
.|||-. |..+||...+.|.++.
T Consensus 77 ~y~C~~--H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 77 MYQCAP--HVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEeCC--CCcCCcEEEEEECcCC
Confidence 999996 9999999999998654
No 86
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.51 E-value=0.00018 Score=56.37 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=51.2
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.++++.|++|+|+..+ ..|-+..+. +.+. .-.+.+.+.+++...+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~~Hnv~~~~----------~~~p------------~g~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---KSHNAESVR----------EVWP------------EGVAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECSS---SSCCCEECT----------TTSC------------TTSCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEEECC---CCccEEEeC----------CcCC------------CCccccccCCCCEEEEEe--CCCeEE
Confidence 3789999999988543 556555442 1111 001122344667666666 899999
Q ss_pred EEEeeehhhhccCceEEEEEEcCc
Q 020366 280 NMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
.|||-. |..+||...++|.+|.
T Consensus 76 ~Y~C~~--H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCAP--HYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEcCC--CCcCCCEEEEEECCCC
Confidence 999986 9999999999998753
No 87
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.47 E-value=0.00067 Score=50.56 Aligned_cols=80 Identities=19% Similarity=0.141 Sum_probs=54.7
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
..+.++.|++|+|+ |.+...|-+.+... .+.. ..+. ...-.+...+.+|+...+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~----------~~p~----g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDED----------AVPA----GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTT----------SSCT----TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCC----------CCcc----cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 34789999999886 76667776665541 1100 0000 00123456788888877777 89999
Q ss_pred eEEEeeehhhhccCceEEEEE
Q 020366 279 WNMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 279 W~~HCHi~~h~~~Gm~~~~~v 299 (327)
+.|+|-+ |..+||...+.|
T Consensus 79 y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEE
T ss_pred EEEEchh--hccCCCEEEEEE
Confidence 9999998 888899888876
No 88
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=97.34 E-value=0.00031 Score=68.39 Aligned_cols=90 Identities=13% Similarity=-0.015 Sum_probs=60.3
Q ss_pred EEecCCcEEEEEEEeCCCC----------------------cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceee
Q 020366 201 MQVNLHEYIEVVFQNNEKT----------------------MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHT 258 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~----------------------~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDT 258 (327)
++++.|+.|++.+.|.-.. .+-+|+||...- ....|.- -+...|.
T Consensus 60 I~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~--~~~DG~p-------~~~i~~g---- 126 (513)
T 2wsd_A 60 IEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYP-------EAWFSKD---- 126 (513)
T ss_dssp EEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC--GGGSCCT-------TSCBCGG----
T ss_pred EEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC--CccCCCC-------cccccCC----
Confidence 7889999999999997643 677999998632 1112210 0000010
Q ss_pred EEeCCC---CEEEEEEEec-CCeeeEEEeeehh----hhccCceEEEEEEcCcc
Q 020366 259 AQVYPQ---SWTVILVSLD-NQGMWNMRSAIWE----RQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 259 v~vp~~---g~~virf~ad-npG~W~~HCHi~~----h~~~Gm~~~~~v~~~~~ 304 (327)
-|++| +..+-+|.++ .+|.+.||||... +...||..++.|..+.+
T Consensus 127 -~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~ 179 (513)
T 2wsd_A 127 -FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 179 (513)
T ss_dssp -GSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred -cccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccc
Confidence 13345 5568899886 6899999999842 45679999998875543
No 89
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=97.33 E-value=0.00039 Score=68.95 Aligned_cols=44 Identities=11% Similarity=-0.065 Sum_probs=36.9
Q ss_pred EeCCCCEEEEEEEec-CCeeeEEEeeehh----hhccCceEEEEEEcCc
Q 020366 260 QVYPQSWTVILVSLD-NQGMWNMRSAIWE----RQYLGQQFYLKVWNAV 303 (327)
Q Consensus 260 ~vp~~g~~virf~ad-npG~W~~HCHi~~----h~~~Gm~~~~~v~~~~ 303 (327)
.|+||+..+.+|.++ .+|.+.||||... +...||...+.|.++.
T Consensus 148 ~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~ 196 (612)
T 2g23_A 148 AVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDE 196 (612)
T ss_dssp CBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHH
T ss_pred CCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcc
Confidence 488999999999987 6999999999954 6678999999887554
No 90
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.31 E-value=0.001 Score=50.38 Aligned_cols=70 Identities=11% Similarity=-0.004 Sum_probs=48.8
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~ 280 (327)
+.++.|+.|+|+ |.+...|-+++.... .|. ..-++-.+.+|+...+.| +.||.+.
T Consensus 36 i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~~--------------~~~~s~~l~~g~~~~~tf--~~~G~y~ 90 (106)
T 1id2_A 36 VTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE--------------DAFRGEMMTKDQAYAITF--NEAGSYD 90 (106)
T ss_dssp EEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS--------------SCEECCCBCTTEEEEEEE--CSCEEEE
T ss_pred EEECCCCEEEEE--ECCCCcEEEEEeCCC-------CCc--------------ccccccccCCCCEEEEEe--CCCEEEE
Confidence 688999999887 777777776655422 010 001223456777777776 8999999
Q ss_pred EEeeehhhhccCceEEEEE
Q 020366 281 MRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 281 ~HCHi~~h~~~Gm~~~~~v 299 (327)
|+|-+ |. ||...+.|
T Consensus 91 ~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 91 YFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EECSS--CT--TCEEEEEE
T ss_pred EEeCC--CC--CCEEEEEE
Confidence 99998 65 88888876
No 91
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.14 E-value=0.0017 Score=51.27 Aligned_cols=70 Identities=11% Similarity=0.006 Sum_probs=49.6
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~ 280 (327)
+.++.|+.|+|+ |.+...|-+++.... .|. .. -++-.+.+|+...+.| +.||.+.
T Consensus 62 i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~-------------~~-~~s~~l~pG~t~~~tF--~~~G~y~ 116 (132)
T 3c75_A 62 VTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------DA-FRGEMMTKDQAYAITF--NEAGSYD 116 (132)
T ss_dssp EEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SC-EECCCBCTTEEEEEEE--CSCEEEE
T ss_pred EEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc-------------cc-ccccccCCCCEEEEEc--CCCEEEE
Confidence 688999999886 777777877764321 010 01 1233467777777777 8999999
Q ss_pred EEeeehhhhccCceEEEEE
Q 020366 281 MRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 281 ~HCHi~~h~~~Gm~~~~~v 299 (327)
|||-+ |. ||...+.|
T Consensus 117 y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 117 YFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EECSS--CT--TCEEEEEE
T ss_pred EEeCC--Cc--CCEEEEEE
Confidence 99998 66 89888876
No 92
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=97.13 E-value=0.00098 Score=52.05 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=30.4
Q ss_pred CCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366 262 YPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 262 p~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
.+|+...+.| +.||.|.|+|-. |..+||...+.|.++.
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~~--H~~~gM~G~I~V~~~~ 96 (123)
T 1paz_A 59 KINENYVLTV--TQPGAYLVKCTP--HYAMGMIALIAVGDSP 96 (123)
T ss_dssp CTTCCEEEEC--CSCEEEEEECTT--TGGGTCEEEEEESSSC
T ss_pred CCCCEEEEEe--CCCEEEEEEeCC--cccCCCEEEEEEcCCC
Confidence 4566555555 899999999986 9999999999997643
No 93
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=97.11 E-value=0.001 Score=52.01 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=31.2
Q ss_pred eCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366 261 VYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 261 vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
+.+|+...+.| +.||.|.|+|-. |..+||...+.|.++.
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~~--H~~~gM~G~I~V~~~~ 96 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCAP--HYMMGMVALVVVGDKR 96 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECST--TTTTTCEEEEEESSCC
T ss_pred cCCCCEEEEEe--CCCeEEEEEeCC--ccccCCEEEEEEcCCC
Confidence 34666655555 899999999986 9999999999997643
No 94
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.63 E-value=0.011 Score=57.44 Aligned_cols=75 Identities=12% Similarity=0.084 Sum_probs=57.4
Q ss_pred eEEEecCCcEEEEEEEeCC---CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC
Q 020366 199 SVMQVNLHEYIEVVFQNNE---KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN 275 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~---~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn 275 (327)
..+.++.|+.|+|++.|.+ +..|.|.+.++... +.+.||....+.|.++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK---------------------------~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS---------------------------MEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce---------------------------eeeCCCCeEEEEEEcCC
Confidence 3567999999999999974 56777776654322 14567778889999999
Q ss_pred CeeeEEEeeehhhh-ccCceEEEEEE
Q 020366 276 QGMWNMRSAIWERQ-YLGQQFYLKVW 300 (327)
Q Consensus 276 pG~W~~HCHi~~h~-~~Gm~~~~~v~ 300 (327)
||.+.+||...-|. |.+|...+.|.
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CEEEEEECCCcCCCCcccceEEEEEe
Confidence 99999999975443 67788888764
No 95
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=96.53 E-value=0.0067 Score=47.16 Aligned_cols=73 Identities=8% Similarity=0.069 Sum_probs=46.0
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.+.++.|++|.|+ |.+. .|-+++.. |.+... . ..+.+.+++...+.| +.||.+
T Consensus 22 ~i~V~~GdtV~f~--n~d~-~H~v~~~~----------~~~p~~-~-----------~~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-GHNVETIK----------GMIPDG-A-----------EAFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-SCCCEECT----------TCSCTT-C-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCC-CcEEEEcc----------cccCCC-c-----------ceeecCCCCEEEEEe--CCCEEE
Confidence 4788999999887 4433 45554443 111100 0 011234666666666 899999
Q ss_pred EEEeeehhhhccCceEEEEEEcCc
Q 020366 280 NMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 280 ~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
.|+|-+ |.. |...+.|.++.
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~~p 94 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGDAP 94 (122)
T ss_dssp EEEETT--EEE--EEEEEEESSSC
T ss_pred EEEeCC--Ccc--CEEEEEEeCCC
Confidence 999988 666 98999887643
No 96
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=96.52 E-value=0.0024 Score=63.28 Aligned_cols=105 Identities=10% Similarity=-0.041 Sum_probs=65.1
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccc----------------cccC---CCCCCCceeeE-
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEK----------------RRTY---NLADTLTRHTA- 259 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~----------------~~~~---n~~~p~~rDTv- 259 (327)
+++++.|+.|++.+.|.-...+-+|.||....--..+.+.-.... .... -+..+..-|-+
T Consensus 66 ti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~~DGv~ 145 (612)
T 3gyr_A 66 TIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGGGNDGWA 145 (612)
T ss_dssp EEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCCTTTSCCG
T ss_pred EEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCCCCceEEcCCCccCCcccCcc
Confidence 478899999999999987777777777754321111111000000 0000 00011122222
Q ss_pred --EeCCCCEEEEEEEecCC-eeeEEEeee----hhhhccCceEEEEEEcCcc
Q 020366 260 --QVYPQSWTVILVSLDNQ-GMWNMRSAI----WERQYLGQQFYLKVWNAVH 304 (327)
Q Consensus 260 --~vp~~g~~virf~adnp-G~W~~HCHi----~~h~~~Gm~~~~~v~~~~~ 304 (327)
.|+||+..+-+|.++.+ |.+.||+|. ..+...||...+.|.++.+
T Consensus 146 q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~ 197 (612)
T 3gyr_A 146 DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEE 197 (612)
T ss_dssp GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHH
T ss_pred cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccc
Confidence 37899999999999876 789999997 3466789999998876544
No 97
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.34 E-value=0.013 Score=48.13 Aligned_cols=94 Identities=7% Similarity=0.028 Sum_probs=60.0
Q ss_pred EEe-cCCcEEEEEEEeCCCCc-CceeecCCCeEEEEeccCCCCcc-----ccccCCC----CCCCceeeEEeCCCCEEEE
Q 020366 201 MQV-NLHEYIEVVFQNNEKTM-QSWHLDGYDFWVVGYGSGQWAAE-----KRRTYNL----ADTLTRHTAQVYPQSWTVI 269 (327)
Q Consensus 201 ~~~-~~g~~v~ivi~N~~~~~-HP~HLHG~~F~Vl~~g~G~~~~~-----~~~~~n~----~~p~~rDTv~vp~~g~~vi 269 (327)
+++ +.|+.|.|+|.|.+... --| +|.|-+...+ .+... .....++ +......+..|.+|+...|
T Consensus 60 itV~kaG~~Vtv~~~N~g~~p~~~m---~Hn~vi~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~sv 134 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQPKASM---GHNLVIAKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSL 134 (167)
T ss_dssp EEEETTCSSEEEEEEECSCSCHHHH---CBCCEEEEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred EEEecCCCEEEEEEEECCCCccccc---cceEEeccCc--chhhhHHHhhhccccccccccccchhccceeeCCCCEEEE
Confidence 788 89999999999997653 001 1334333322 11000 0000011 0012345667899999999
Q ss_pred EEEec--CCeeeEEEeeehhhhccCceEEEEEE
Q 020366 270 LVSLD--NQGMWNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 270 rf~ad--npG~W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
.|.++ .||.+-|+|-+--|+. ||-..++|.
T Consensus 135 tf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 135 TLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred EEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 99988 8999999999877877 888888875
No 98
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.23 E-value=0.029 Score=43.98 Aligned_cols=95 Identities=9% Similarity=-0.008 Sum_probs=60.0
Q ss_pred EEecCC-cEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc------ccccCCC----CCCCceeeEEeCCCCEEEE
Q 020366 201 MQVNLH-EYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE------KRRTYNL----ADTLTRHTAQVYPQSWTVI 269 (327)
Q Consensus 201 ~~~~~g-~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~------~~~~~n~----~~p~~rDTv~vp~~g~~vi 269 (327)
++++.| +.|.|++.|.+.... --=+|.|-+...+ .+... .....++ +.-....+..|.||+...+
T Consensus 20 i~V~~G~~~vtv~~~N~g~~~~--~~m~H~~vi~~~~--~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~sv 95 (129)
T 1cuo_A 20 ISVPASCAEFTVNFEHKGHMPK--TGMGHNWVLAKSA--DVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSV 95 (129)
T ss_dssp EEEETTCSEEEEEEEECSSSCH--HHHCBCCEEEEGG--GHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEE
T ss_pred EEEcCCCeEEEEEEEECCCCcc--cccccceEEecCc--chhhhHHHhhhccccccccccccccceeeeeEECCCCEEEE
Confidence 789999 999999999975430 0002344443322 10000 0000011 0012235667899999999
Q ss_pred EEEec---CCeeeEEEeeehhhhccCceEEEEEE
Q 020366 270 LVSLD---NQGMWNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 270 rf~ad---npG~W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
.|.++ .||.+-|.|-+--|+. ||-..+.|.
T Consensus 96 tf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 96 KFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp EEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 99997 9999999998877777 788888774
No 99
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.93 E-value=0.047 Score=43.10 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=49.7
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~ 280 (327)
+.++.|+.|+|++.|.+ ..|. |+|-+. + .. +.+.||....+.|.++.||.+.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~-------------~----~k---~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGT-------------N----IN---VEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETTS-------------S----CE---EEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecCC-------------C----ce---eEeCCCCcEEEEEEcCCCEEEE
Confidence 67899999999999975 4443 444111 1 11 2345666678899999999999
Q ss_pred EEeeehh-hhccCceEEEEEE
Q 020366 281 MRSAIWE-RQYLGQQFYLKVW 300 (327)
Q Consensus 281 ~HCHi~~-h~~~Gm~~~~~v~ 300 (327)
++|...- .-|.+|-..+.|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9996522 2346788887764
No 100
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.46 E-value=0.09 Score=43.05 Aligned_cols=72 Identities=11% Similarity=0.146 Sum_probs=52.6
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~ 280 (327)
+.++.|+.|+|.++|. +..|.|.+=+... .. .+-||....+.|.++.||.+.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi------------------------k~---da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTNI------------------------NV---EVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSSC------------------------EE---EECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCCe------------------------EE---EecCCceeEEEEEeCCCEEEE
Confidence 6789999999999997 4556554432211 12 234566677889999999999
Q ss_pred EEeee-hhhhccCceEEEEEE
Q 020366 281 MRSAI-WERQYLGQQFYLKVW 300 (327)
Q Consensus 281 ~HCHi-~~h~~~Gm~~~~~v~ 300 (327)
+.|.. --+-|.+|-..+.|.
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99985 335678898888775
No 101
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.20 E-value=0.11 Score=40.65 Aligned_cols=95 Identities=9% Similarity=0.002 Sum_probs=58.4
Q ss_pred EEe-cCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc------ccccCCC---CC-CCceeeEEeCCCCEEEE
Q 020366 201 MQV-NLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE------KRRTYNL---AD-TLTRHTAQVYPQSWTVI 269 (327)
Q Consensus 201 ~~~-~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~------~~~~~n~---~~-p~~rDTv~vp~~g~~vi 269 (327)
+++ +.|+.|.+++.|.+..+ ---=+|.|-+...+ .+... ....-++ .+ -....|..|.+|+...+
T Consensus 19 i~V~k~G~~vtv~~~N~g~~p--~~~m~Hn~vi~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~v 94 (128)
T 2iaa_C 19 IVVDKTCKEFTINLKHTGKLP--KAAMGHNVVVSKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSV 94 (128)
T ss_dssp EEECTTCSEEEEEEEECSCSC--HHHHCBCCEEEETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred EEEecCCcEEEEEEEECCCCc--ccCCCceEEEcccc--chhhHHHhhhhccccccccccccchhhccceeeCCCCEEEE
Confidence 688 88999999999997653 00001233332211 10000 0000011 01 11235667899999999
Q ss_pred EEEec--CCe-eeEEEeeehhhhccCceEEEEEE
Q 020366 270 LVSLD--NQG-MWNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 270 rf~ad--npG-~W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
.|.+. .|| .+-|.|-+--|+. ||-..+.|.
T Consensus 95 tf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 95 TFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99998 899 5999999877877 898888774
No 102
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.18 E-value=0.12 Score=40.46 Aligned_cols=94 Identities=11% Similarity=0.017 Sum_probs=58.5
Q ss_pred EEe-cCCcEEEEEEEeCCCCc-CceeecCCCeEEEEeccCCCCcc------ccccCCCC---C-CCceeeEEeCCCCEEE
Q 020366 201 MQV-NLHEYIEVVFQNNEKTM-QSWHLDGYDFWVVGYGSGQWAAE------KRRTYNLA---D-TLTRHTAQVYPQSWTV 268 (327)
Q Consensus 201 ~~~-~~g~~v~ivi~N~~~~~-HP~HLHG~~F~Vl~~g~G~~~~~------~~~~~n~~---~-p~~rDTv~vp~~g~~v 268 (327)
+++ +.|+.|.+++.|.+... --| +|.|-+...+ .+... ....-++. + .....+..|.||+...
T Consensus 20 i~V~k~G~~vtv~~~N~g~~p~~~m---~H~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~s 94 (129)
T 2ccw_A 20 IVVDKSCKQFTMHLKHVGKMAKVAM---GHNLVLTKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp EEECTTCSEEEEEEEECSCCCHHHH---CBCCEEEEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred EEEecCCCEEEEEEEECCCcccccC---cceEEEcCcc--chhhhHHHhhhhcccccccccccccceeeeeEECCCCEEE
Confidence 788 88999999999997652 000 2334333322 11000 00000110 1 1123456789999999
Q ss_pred EEEEec--CCee-eEEEeeehhhhccCceEEEEEE
Q 020366 269 ILVSLD--NQGM-WNMRSAIWERQYLGQQFYLKVW 300 (327)
Q Consensus 269 irf~ad--npG~-W~~HCHi~~h~~~Gm~~~~~v~ 300 (327)
+-|.++ .||. +-|.|-+--|+. ||-..+.|.
T Consensus 95 vtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 95 VTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999998 8865 999998877877 898888774
No 103
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.94 E-value=0.13 Score=40.11 Aligned_cols=89 Identities=6% Similarity=0.001 Sum_probs=57.3
Q ss_pred EEe-cCCcEEEEEEEeCCCCc-----CceeecCCCeEEEEeccCCCCcc------ccccCCCC---C-CCceeeEEeCCC
Q 020366 201 MQV-NLHEYIEVVFQNNEKTM-----QSWHLDGYDFWVVGYGSGQWAAE------KRRTYNLA---D-TLTRHTAQVYPQ 264 (327)
Q Consensus 201 ~~~-~~g~~v~ivi~N~~~~~-----HP~HLHG~~F~Vl~~g~G~~~~~------~~~~~n~~---~-p~~rDTv~vp~~ 264 (327)
+++ +.|+.|.|++.|.+..+ |- |-+...+ ..... ....-++. + .....|-.|.||
T Consensus 20 i~V~k~G~~vtv~~~N~g~~p~~~m~H~-------~vi~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pG 90 (128)
T 1nwp_A 20 IAIDKSCKTFTVELTHSGSLPKNVMGHN-------LVISKEA--DMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAG 90 (128)
T ss_dssp EEECTTCSEEEEEEEECSSCCHHHHCBC-------CEEEEGG--GHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTT
T ss_pred EEEecCCCEEEEEEEECCCCcccCCCce-------EEEcccc--chhhHHHHHhhccccccccccccchhheeeeeeCCC
Confidence 788 89999999999997653 54 3332221 00000 00000111 1 122345568999
Q ss_pred CEEEEEEEec--CCee-eEEEeeehhhhccCceEEEEE
Q 020366 265 SWTVILVSLD--NQGM-WNMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 265 g~~virf~ad--npG~-W~~HCHi~~h~~~Gm~~~~~v 299 (327)
+...+.|.++ .||. +-|.|-+--|+. ||-..+.|
T Consensus 91 et~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 91 EKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp CEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred CEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 9999999998 7876 999999877877 78887776
No 104
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.65 E-value=0.54 Score=36.36 Aligned_cols=91 Identities=9% Similarity=0.089 Sum_probs=57.1
Q ss_pred EEecC-CcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCc---c--cc-ccCCC----CCCCceeeEEeCCCCEEEE
Q 020366 201 MQVNL-HEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAA---E--KR-RTYNL----ADTLTRHTAQVYPQSWTVI 269 (327)
Q Consensus 201 ~~~~~-g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~---~--~~-~~~n~----~~p~~rDTv~vp~~g~~vi 269 (327)
+.++. |+.|+++|.|.+..+ ---=||.| ||+.. +.... + .. ..-++ +....-.|.+|.+|+...|
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~-~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~v 95 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTA-ADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSV 95 (125)
T ss_dssp EEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEH-HHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEE
T ss_pred EEEecCCCEEEEEEEECCccc--ccccCceE-EEccc-chHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEE
Confidence 78876 999999999997542 11113444 44432 11100 0 00 00111 1234456778999999999
Q ss_pred EEEec---CCeeeEEEeeehhhhccCceEEEEE
Q 020366 270 LVSLD---NQGMWNMRSAIWERQYLGQQFYLKV 299 (327)
Q Consensus 270 rf~ad---npG~W~~HCHi~~h~~~Gm~~~~~v 299 (327)
-|.+. .||.+-|-|- -|+ ||-..+.|
T Consensus 96 tf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 96 TFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 99987 8999999999 588 89888876
No 105
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=89.25 E-value=0.25 Score=38.79 Aligned_cols=29 Identities=17% Similarity=0.179 Sum_probs=23.5
Q ss_pred eeEEEEcCCceEEEEEEeCCCCCceEEEEE
Q 020366 37 YDSLDVHVGQSVSVLVTLNQPPKDYYIVAS 66 (327)
Q Consensus 37 v~~l~l~~GqRydvlv~~~~~~~~y~ir~~ 66 (327)
.+...|.+||++++.+++++ +|.|++...
T Consensus 96 ~~t~~l~pGet~~v~f~~~~-pG~y~f~C~ 124 (139)
T 2aan_A 96 AESPLANGNETVEVTFTAPA-AGTYLYICT 124 (139)
T ss_dssp EECCCBCTTCEEEEEEECCS-SEEEEEECC
T ss_pred ccccccCCCCEEEEEEECCC-CeEEEEEcC
Confidence 45667899999999999874 688887765
No 106
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=86.88 E-value=2.1 Score=35.99 Aligned_cols=74 Identities=12% Similarity=0.054 Sum_probs=51.9
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
+.+.++.|+.|++.|++.+- . |.|+|-+.| ...| +-||....+.|.++.||.
T Consensus 41 n~l~lP~g~~V~~~lTS~DV-i-------HSF~IP~lg-----------------vK~d---aiPGr~n~l~~~~~~pG~ 92 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNSV-M-------HSFFIPRLG-----------------SQIY---AMAGMQTRLHLIANEPGT 92 (205)
T ss_dssp SEEEEETTSCEEEEEEESSS-C-------EEEEEGGGT-----------------EEEE---ECTTCCEEEEECCSSSEE
T ss_pred ceEEEeCCCEEEEEEecCCc-e-------eeEEecccC-----------------cEEE---ecCCceEEEEEEeCCCeE
Confidence 34789999999999998754 3 356663222 1122 224556678899999999
Q ss_pred eEEEeeehh-hhccCceEEEEEE
Q 020366 279 WNMRSAIWE-RQYLGQQFYLKVW 300 (327)
Q Consensus 279 W~~HCHi~~-h~~~Gm~~~~~v~ 300 (327)
+...|--.- .-|..|-..+.+.
T Consensus 93 y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 93 YDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEE
T ss_pred EEEEcccccccchhhceEEEEEE
Confidence 999998644 3366788888776
No 107
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=84.68 E-value=2.7 Score=37.42 Aligned_cols=77 Identities=9% Similarity=0.132 Sum_probs=53.7
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
+.+.+|.|+.|++.+++.+ ..| .|+|=+-| ...| +-||....+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViH-------sf~iP~lg-----------------~k~d---aiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIH-------AWTIPAFA-----------------VKQD---AVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCE-------EEEEGGGT-----------------EEEE---ECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeCC-ccc-------eeeEcccC-----------------ceEE---ecCCceEEEEEEeCCCEE
Confidence 3478999999999999865 344 45552221 1223 234555678899999999
Q ss_pred eEEEeeehh-hhccCceEEEEEEcCc
Q 020366 279 WNMRSAIWE-RQYLGQQFYLKVWNAV 303 (327)
Q Consensus 279 W~~HCHi~~-h~~~Gm~~~~~v~~~~ 303 (327)
+...|.-.- .-|..|-..+++..++
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~ 266 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQE 266 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHH
Confidence 999999643 4477788888887553
No 108
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=79.19 E-value=5 Score=35.02 Aligned_cols=76 Identities=12% Similarity=0.187 Sum_probs=52.4
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
+.+.+|.|+.|++.+++.+- .| .|+|-+-| ...| +-||....+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~DV-iH-------sf~ip~l~-----------------~k~d---a~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADV-IH-------SWTVPAFG-----------------VKQD---AVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEESSS-CE-------EEEEGGGT-----------------EEEE---ECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEECcc-cc-------eeeecccC-----------------ceEE---ecCCceeEEEEecCCcEE
Confidence 34789999999999998754 34 45552222 1223 224555678899999999
Q ss_pred eEEEeeehh-hhccCceEEEEEEcC
Q 020366 279 WNMRSAIWE-RQYLGQQFYLKVWNA 302 (327)
Q Consensus 279 W~~HCHi~~-h~~~Gm~~~~~v~~~ 302 (327)
+...|.-.- .-|..|-..+.+..+
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~ 247 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSE 247 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECH
T ss_pred EEEEChHhcccCcccCeEEEEEEcH
Confidence 999998643 336668888877654
No 109
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=78.48 E-value=6.6 Score=29.92 Aligned_cols=30 Identities=13% Similarity=0.360 Sum_probs=16.2
Q ss_pred eeEEEEcCCceEEEEEEeCC--CCCceEEEEE
Q 020366 37 YDSLDVHVGQSVSVLVTLNQ--PPKDYYIVAS 66 (327)
Q Consensus 37 v~~l~l~~GqRydvlv~~~~--~~~~y~ir~~ 66 (327)
.....|.|||...+=.+.++ .+|.|.+.+.
T Consensus 69 ~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 69 FQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp CEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred hceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 44555666665555555553 2455555554
No 110
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=76.51 E-value=1 Score=32.91 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=23.6
Q ss_pred eeEEEEcCCceEEEEEEeCCCCCceEEEEE
Q 020366 37 YDSLDVHVGQSVSVLVTLNQPPKDYYIVAS 66 (327)
Q Consensus 37 v~~l~l~~GqRydvlv~~~~~~~~y~ir~~ 66 (327)
.+.+.|.+||++++-++++..+|.||+...
T Consensus 61 ~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 61 HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 466889999999997776445789998765
No 111
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=76.44 E-value=5.2 Score=29.55 Aligned_cols=28 Identities=11% Similarity=0.203 Sum_probs=22.8
Q ss_pred EEEEcCCceEEEEEEeCCCCCceEEEEEe
Q 020366 39 SLDVHVGQSVSVLVTLNQPPKDYYIVAST 67 (327)
Q Consensus 39 ~l~l~~GqRydvlv~~~~~~~~y~ir~~~ 67 (327)
...+.|||.+++.+++++ +|.|+.....
T Consensus 70 ~~~i~pG~~~~~~f~~~~-~G~y~~~C~~ 97 (112)
T 1iby_A 70 QEVIKAGETKTISFTADK-AGAFTIWCQL 97 (112)
T ss_dssp EEEECTTCEEEEEEECCS-CEEEEEBCSS
T ss_pred eeEeCCCCEEEEEEECCC-CEEEEEECCC
Confidence 567999999999998875 6889877653
No 112
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=74.23 E-value=6.7 Score=29.54 Aligned_cols=44 Identities=16% Similarity=0.428 Sum_probs=31.2
Q ss_pred CeeEEecCC-CcEEEEEEeCC-eEEEEEecCccceeeEeeEEEEcCCceEEEEEEe
Q 020366 1 MFRISNVGL-STSFNFRIQGH-TMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTL 54 (327)
Q Consensus 1 RlRliNa~~-~~~~~~sidgh-~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~ 54 (327)
+|||+|.+. ...|.|+++|. .+.++ | +. .+.+.+||..++-|..
T Consensus 36 tlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~~---~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 36 TLKVINKTQQVQEYNLDVKGLNDVSWY---G----KQ---TIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEECSSSCEEEEEEEESCSSCEEE---S----CC---EEEECTTCEEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeCCcccEEe---C----CC---cEEECCCCEEEEEEEE
Confidence 488999997 78888898874 34433 2 11 3899999977766654
No 113
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=71.99 E-value=7.6 Score=33.07 Aligned_cols=76 Identities=9% Similarity=0.111 Sum_probs=51.2
Q ss_pred eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366 199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM 278 (327)
Q Consensus 199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~ 278 (327)
+.+.+|.|+.|++.+++.+- .| .|+|=+-| .+.|. -||-.-.+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~DV-iH-------sf~vP~lg-----------------~K~Da---iPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSEDV-LH-------SWAVPSLG-----------------LKTDA---IPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEESSS-CE-------EEEEGGGT-----------------EEEEE---CTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeCcc-cc-------eeeecccC-----------------cEEEe---cCCceEEEEEecCCcEE
Confidence 44789999999999998654 34 45552221 12332 23445567889999999
Q ss_pred eEEEeeehh-hhccCceEEEEEEcC
Q 020366 279 WNMRSAIWE-RQYLGQQFYLKVWNA 302 (327)
Q Consensus 279 W~~HCHi~~-h~~~Gm~~~~~v~~~ 302 (327)
+...|.-.- .-|..|-..+++..+
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPL 216 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECH
T ss_pred EEEEehhhcccccccCeEEEEEEcH
Confidence 999998643 336668887777654
No 114
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=59.08 E-value=7.8 Score=34.75 Aligned_cols=73 Identities=14% Similarity=0.152 Sum_probs=49.3
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
.+.++.|+.|++.+++.+- .| .|+|=+-| ...| +-||-...+.|.++.||.+
T Consensus 152 ~l~lP~g~~V~~~lTS~DV-iH-------sf~IP~lg-----------------~k~D---aiPGr~n~~~~~~~~~G~y 203 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSV-MN-------SFFIPRLG-----------------SQIY---AMAGMQTRLHLIANEPGTY 203 (315)
T ss_dssp BCCCCSSSEEEEEECBSSS-CE-------EEEEGGGT-----------------EEEE---ECBTSCEEEEEECCSCBCC
T ss_pred eEEEeCCCEEEEEEEeCCc-cc-------eeeecccC-----------------cEEe---ecCCcceeeEEecCCCeEE
Confidence 3578999999999987754 34 45552222 1223 2244556788999999999
Q ss_pred EEEeeehh-hhccCceEEEEEE
Q 020366 280 NMRSAIWE-RQYLGQQFYLKVW 300 (327)
Q Consensus 280 ~~HCHi~~-h~~~Gm~~~~~v~ 300 (327)
...|.-.- .-|..|-..+.+.
T Consensus 204 ~g~CsE~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 204 DGISASYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp EEBCCSCCSTTTTTCCEECCBC
T ss_pred EEeccccchhhHHhccceEEEe
Confidence 99998643 3366677777665
No 115
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=48.46 E-value=13 Score=28.48 Aligned_cols=26 Identities=19% Similarity=0.249 Sum_probs=20.5
Q ss_pred EEcCCceEEEEEEeC--CCCCceEEEEE
Q 020366 41 DVHVGQSVSVLVTLN--QPPKDYYIVAS 66 (327)
Q Consensus 41 ~l~~GqRydvlv~~~--~~~~~y~ir~~ 66 (327)
.|++||++++.+++. +++++|+....
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~ 113 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFFCS 113 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEECC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEEC
Confidence 589999999999986 44455987654
No 116
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=46.92 E-value=20 Score=26.96 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=27.9
Q ss_pred EEEecCCeeeEEEeeehhhhccCceEEE-EEEcC
Q 020366 270 LVSLDNQGMWNMRSAIWERQYLGQQFYL-KVWNA 302 (327)
Q Consensus 270 rf~adnpG~W~~HCHi~~h~~~Gm~~~~-~v~~~ 302 (327)
+|..+.+|...|=|=...|-..||-+++ .|..+
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4566889999999999999999999999 77654
No 117
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=44.52 E-value=18 Score=27.75 Aligned_cols=28 Identities=21% Similarity=0.283 Sum_probs=20.6
Q ss_pred EEEEcCCceEEEEEEeC--CCCCceEEEEE
Q 020366 39 SLDVHVGQSVSVLVTLN--QPPKDYYIVAS 66 (327)
Q Consensus 39 ~l~l~~GqRydvlv~~~--~~~~~y~ir~~ 66 (327)
.-.|++||++++.+++. +++++|+....
T Consensus 83 t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~ 112 (128)
T 2iaa_C 83 TSVIGGGETDSVTFDVSKLKEGEDYAFFCS 112 (128)
T ss_dssp CCCBCTTCEEEEEEESSCCCTTCCEEEECC
T ss_pred ceeeCCCCEEEEEEeccccCCCceEEEEEC
Confidence 33589999999999986 43336977654
No 118
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=35.02 E-value=26 Score=26.80 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=21.3
Q ss_pred EEEcCCceEEEEEEeC--CCCCceEEEEE
Q 020366 40 LDVHVGQSVSVLVTLN--QPPKDYYIVAS 66 (327)
Q Consensus 40 l~l~~GqRydvlv~~~--~~~~~y~ir~~ 66 (327)
-.|++||+++|.+++. +++++||....
T Consensus 85 ~~l~pGet~svtf~~~~l~~G~~Y~f~C~ 113 (129)
T 2ccw_A 85 KVIGGGESDSVTFDVSKIAAGENYAYFCS 113 (129)
T ss_dssp CCBCTTCEEEEEEEGGGSCTTCCEEEECC
T ss_pred eEECCCCEEEEEEeccccCCCceEEEEeC
Confidence 3589999999999987 55566987654
No 119
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=34.18 E-value=13 Score=31.31 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=27.1
Q ss_pred cceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEE
Q 020366 31 HTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAS 66 (327)
Q Consensus 31 ~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~ 66 (327)
.+++.+-..+.|.+|+.+||.|..-..++.||++..
T Consensus 2 ~~~~l~~~~~~l~~~~~~~V~Vt~v~sP~~Fyvq~~ 37 (226)
T 4b9x_A 2 PAEALEWTWVEFTVDETVDVVVCMMYSPGEFYCHFL 37 (226)
T ss_dssp ----CCCCBCCCCTTCEEEEEEEEEEETTEEEEEEC
T ss_pred CccceeeEEEEcCCCCEEEEEEEEEeCCCEEEEEEc
Confidence 456777778889999999999986555789999875
No 120
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=31.57 E-value=44 Score=22.99 Aligned_cols=24 Identities=21% Similarity=0.206 Sum_probs=19.2
Q ss_pred EEEEeCCeEEEEEecCccceeeEe
Q 020366 14 NFRIQGHTMKLVEVEGSHTIQNIY 37 (327)
Q Consensus 14 ~~sidgh~l~VIa~DG~~v~P~~v 37 (327)
.+.++|..|+|.++|+.-++-+.+
T Consensus 55 ~v~~~~~~f~V~~~~~~rI~~v~v 78 (81)
T 3lae_A 55 ICEIDGLLITILEVGDNMIKQAKV 78 (81)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEE
T ss_pred EEEECCEEEEEEEeeCCEEEEEEE
Confidence 577899999999999987655443
No 121
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=31.12 E-value=52 Score=24.30 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=28.0
Q ss_pred EEEecCCeeeEEEeeehhhhccCceEEEEEEcC
Q 020366 270 LVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA 302 (327)
Q Consensus 270 rf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~ 302 (327)
+|..+.+|...|=|=...|-..||-+++.|..+
T Consensus 73 ~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 73 SIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred EEEECCCcCEEEECCCCCcccCCCEEEEEEcCC
Confidence 356689999999999999999999999988643
No 122
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=31.06 E-value=16 Score=30.12 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=26.9
Q ss_pred cceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEE
Q 020366 31 HTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAS 66 (327)
Q Consensus 31 ~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~ 66 (327)
++++.+-..+.|.+|+.++|.|..-..++.||++..
T Consensus 2 ~~~~l~~~~~~l~~~~~~~V~Vt~v~sP~~Fyvq~~ 37 (201)
T 4b9w_A 2 PAEALEWTWVEFTVDETVDVVVCMMYSPGEFYCHFL 37 (201)
T ss_dssp ----CCCCBCCCCTTCEEEEEEEEEEETTEEEEEEC
T ss_pred CcCcceeEEEEcCCCCEEEEEEEEEeCCCEEEEEEC
Confidence 456666677889999999999987555789999874
No 123
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=30.49 E-value=34 Score=26.08 Aligned_cols=27 Identities=19% Similarity=0.186 Sum_probs=21.7
Q ss_pred EEEcCCceEEEEEEeC--CCCCceEEEEE
Q 020366 40 LDVHVGQSVSVLVTLN--QPPKDYYIVAS 66 (327)
Q Consensus 40 l~l~~GqRydvlv~~~--~~~~~y~ir~~ 66 (327)
-.|++||+++|.++++ ..+|.||....
T Consensus 85 ~~l~pGet~svtf~~~~~~~~G~Y~f~C~ 113 (129)
T 1cuo_A 85 PIIGGGEKTSVKFKVSALSKDEAYTYFCS 113 (129)
T ss_dssp CCBCTTCEEEEEEEGGGCCTTSCEEEECC
T ss_pred eEECCCCEEEEEEeccccCCCceEEEEeC
Confidence 4589999999999986 24789987765
No 124
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=30.16 E-value=1.8e+02 Score=22.16 Aligned_cols=69 Identities=7% Similarity=0.045 Sum_probs=40.6
Q ss_pred EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
+.++.|+.+.|.|..+... |+...+.....+......... +. |.-.+.-.+..+|.-+++|+|-.||..
T Consensus 37 I~v~~Ge~~~I~L~~NPTT-------GY~W~~~~~~~~vl~~l~~~~--y~-~~~~~~~~vGagG~~~w~f~A~~~G~~ 105 (132)
T 2wgn_B 37 LKLTQGQELVLTLPSNPTT-------GFRWELRNPAASVLKRLGPEV--YS-NSEEDSGLVGSGGESTWRFRVAASGDD 105 (132)
T ss_dssp EEECTTCEEEEEECCCTTT-------SCEEEEEECCTTTEEECCSCC--SC-SSCSSCCCSSSSCCEEEEEEECSCEEE
T ss_pred EEEcCCCEEEEEeCCCCCC-------CeEEEEecCCCceEEecccce--ec-CCCCccCCcCCCceEEEEEEEcCCceE
Confidence 6899999999999744322 666555443311111000000 11 111234467789999999999999954
No 125
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=29.82 E-value=73 Score=24.64 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=28.6
Q ss_pred EEe-cCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366 271 VSL-DNQGMWNMRSAIWERQYLGQQFYLKVWNAV 303 (327)
Q Consensus 271 f~a-dnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~ 303 (327)
|.. +.+|..-|=|=...|-..||-+++.|....
T Consensus 77 v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 77 IERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp EEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred EEeccCCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 555 889999999999999999999999997543
No 126
>1eqw_A Cu,Zn superoxide dismutase; greek KEY B-barrel, oxidoreductase; 2.30A {Salmonella typhimurium} SCOP: b.1.8.1 PDB: 2wn0_A* 2wn1_A* 2wwn_A* 2wwo_A*
Probab=28.27 E-value=32 Score=27.32 Aligned_cols=27 Identities=4% Similarity=0.039 Sum_probs=21.3
Q ss_pred ecCCcEEEEEEEeCCCCcCceeecCCC
Q 020366 203 VNLHEYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 203 ~~~g~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
.+.+..|++.|.+.....|-||+|-.-
T Consensus 27 ~~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (156)
T 1eqw_A 27 TPYGLLFTPHLNGLTPGIHGFHVHTNP 53 (156)
T ss_dssp ETTEEEEEEEECSCCSEEECEEEESSS
T ss_pred cCCcEEEEEEEeCCCCCceeEEECCCC
Confidence 345667888888888889999999764
No 127
>1eso_A SOD, Cu, Zn superoxide dismutase; oxidoreductase, monomeric superoxide dismutase, copper enzymes, enzyme evolution, X- RAY; 2.00A {Escherichia coli} SCOP: b.1.8.1 PDB: 2k4w_A
Probab=27.82 E-value=33 Score=27.18 Aligned_cols=27 Identities=4% Similarity=-0.015 Sum_probs=21.2
Q ss_pred ecCCcEEEEEEEeCCCCcCceeecCCC
Q 020366 203 VNLHEYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 203 ~~~g~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
.+.+..|++.|.+.....|-||+|-.-
T Consensus 27 ~~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (154)
T 1eso_A 27 TDKGLEFSPDLKALPPGEHGFHIHAKG 53 (154)
T ss_dssp ETTEEEEEEEECSCCSEEECEEEESSS
T ss_pred cCCCEEEEEEEECCCCCcccEEEcCCC
Confidence 345667888888888888999999764
No 128
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=27.50 E-value=73 Score=26.43 Aligned_cols=26 Identities=27% Similarity=0.383 Sum_probs=12.6
Q ss_pred eeEEecCCCcEEEEEEeCCeEEEEEecC
Q 020366 2 FRISNVGLSTSFNFRIQGHTMKLVEVEG 29 (327)
Q Consensus 2 lRliNa~~~~~~~~sidgh~l~VIa~DG 29 (327)
++++|+|-.+.|.++ +.++..+..++
T Consensus 107 l~~~~aG~~~~~l~r--~g~~~~l~~~~ 132 (242)
T 3t91_A 107 CKFLKVGSTPSFIKR--GDQVMKVQASN 132 (242)
T ss_dssp EEEEEESCCCEEEEE--TTEEEECCCC-
T ss_pred EEEEcCCCCceEEEE--CCEEEEecCCC
Confidence 556666665555443 23444444444
No 129
>2aqm_A Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10A {Brucella abortus}
Probab=27.42 E-value=32 Score=27.26 Aligned_cols=26 Identities=8% Similarity=0.019 Sum_probs=20.8
Q ss_pred cCCcEEEEEEEeCCCCcCceeecCCC
Q 020366 204 NLHEYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 204 ~~g~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
+.+..|++.|.+.....|-||+|-.-
T Consensus 28 ~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (154)
T 2aqm_A 28 PGGLHFKVNMEKLTPGYHGFHVHENP 53 (154)
T ss_dssp TTSEEEEEEECSCCSEEECEEEESSS
T ss_pred CCCEEEEEEEECCCCCcceEEEccCC
Confidence 44667888888888889999999765
No 130
>1oal_A Superoxide dismutase; oxidoreductase, prokaryotic Cu, protein-subunit interaction recognition, protein electrostatic; 1.5A {Photobacterium leiognathi} SCOP: b.1.8.1 PDB: 1bzo_A 1ibh_A 1ibd_A 1yai_A 1ib5_A 1oaj_A 1ibb_A 1ibf_A
Probab=27.19 E-value=34 Score=26.97 Aligned_cols=27 Identities=4% Similarity=-0.021 Sum_probs=21.4
Q ss_pred ecCCcEEEEEEEeCCCCcCceeecCCC
Q 020366 203 VNLHEYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 203 ~~~g~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
.+.+..|++.|.+.....|-||+|-.-
T Consensus 24 ~~~gv~v~~~l~GL~pG~hGfHIHe~G 50 (151)
T 1oal_A 24 NKYGVVFIPELADLTPGEHGFHIHQNG 50 (151)
T ss_dssp ETTEEEEEEEECSCCSEEECEEEESSS
T ss_pred cCCcEEEEEEEECCCCCcceEEEccCC
Confidence 455667888888888889999999754
No 131
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=26.82 E-value=62 Score=22.28 Aligned_cols=24 Identities=0% Similarity=0.033 Sum_probs=19.0
Q ss_pred EEEEeCCeEEEEEecCccceeeEe
Q 020366 14 NFRIQGHTMKLVEVEGSHTIQNIY 37 (327)
Q Consensus 14 ~~sidgh~l~VIa~DG~~v~P~~v 37 (327)
.+.++|..|+|.++|+.-++-+.+
T Consensus 55 ~v~~~~~~f~V~~~~~~rI~~v~v 78 (83)
T 3llb_A 55 VVELGEFRFRVLNADSRRVHLLRL 78 (83)
T ss_dssp EEEETTEEEEEEEECSSCEEEEEE
T ss_pred EEEECCEEEEEEEeeCCEEEEEEE
Confidence 477899999999999987655443
No 132
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=25.43 E-value=64 Score=22.35 Aligned_cols=24 Identities=0% Similarity=0.052 Sum_probs=19.0
Q ss_pred EEEEeCCeEEEEEecCccceeeEe
Q 020366 14 NFRIQGHTMKLVEVEGSHTIQNIY 37 (327)
Q Consensus 14 ~~sidgh~l~VIa~DG~~v~P~~v 37 (327)
.+.++|..|+|+++|+.-++-+.+
T Consensus 59 ~v~~~~~~f~V~~~~~~rI~~v~v 82 (86)
T 2pls_A 59 ITFWENWRLEVIDMDSKRIDKVLA 82 (86)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEE
T ss_pred EEEECCEEEEEEEeeCCEEEEEEE
Confidence 467899999999999987655443
No 133
>2v33_A E1 envelope glycoprotein; transmembrane, viral protein; 1.55A {Semliki forest virus} SCOP: b.1.18.4
Probab=24.90 E-value=52 Score=23.43 Aligned_cols=22 Identities=9% Similarity=0.058 Sum_probs=20.4
Q ss_pred CCEEEEEEEecCCeeeEEEeee
Q 020366 264 QSWTVILVSLDNQGMWNMRSAI 285 (327)
Q Consensus 264 ~g~~virf~adnpG~W~~HCHi 285 (327)
||-+.|+|.+|-+|.-..|-|-
T Consensus 22 GGvatl~Y~a~k~GkCaVHs~S 43 (91)
T 2v33_A 22 GGVLTLTYKTNKNGDCSVHSHS 43 (91)
T ss_dssp EEEEEEEEEESSCEEEEEECCC
T ss_pred CCeEEEEEecCCCccceeeccC
Confidence 7889999999999999999994
No 134
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=24.87 E-value=62 Score=29.19 Aligned_cols=31 Identities=23% Similarity=0.212 Sum_probs=25.4
Q ss_pred eeEEEEcCCceEEEEEEeCC-----CCCceEEEEEe
Q 020366 37 YDSLDVHVGQSVSVLVTLNQ-----PPKDYYIVAST 67 (327)
Q Consensus 37 v~~l~l~~GqRydvlv~~~~-----~~~~y~ir~~~ 67 (327)
-+-+.|+|||..++-+++.+ .+|.|.|++..
T Consensus 92 d~f~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~~g 127 (343)
T 2x3c_A 92 KDFQLLKAGQSLTVQAEVSGLYDMSAQGQYSIRYQL 127 (343)
T ss_dssp GGEEEECTTCEEEEEEECTTTBTCCSCEEEEEEEC-
T ss_pred hhcEEeCCCCeEEEEEehhhccccCCCceEEEEEee
Confidence 46899999999999999965 35789988864
No 135
>2aqp_A Superoxide dismutase [CU-ZN]; electrostatic guidance, neisseria MENI oxidoreductase; 1.30A {Neisseria meningitidis} PDB: 2aqn_A 2aqr_A 2aqq_A 2aqt_C 2aqs_A 2aps_A 1z9p_A
Probab=24.74 E-value=40 Score=26.98 Aligned_cols=27 Identities=11% Similarity=0.111 Sum_probs=21.3
Q ss_pred ecCCcEEEEEEEeCCCCcCceeecCCC
Q 020366 203 VNLHEYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 203 ~~~g~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
.+.+..|++.|.......|-||+|-.-
T Consensus 36 ~~~gv~v~~~l~GL~pG~HGfHIHe~G 62 (164)
T 2aqp_A 36 SNYGLVFTPDLQGLSAGLHGFHIHENP 62 (164)
T ss_dssp ETTEEEEEEEECSCCSEEECEEEESSS
T ss_pred cCCcEEEEEEEeCCCCCceeEEEecCC
Confidence 345667888888888888999999754
No 136
>2wyt_A Superoxide dismutase [CU-ZN]; oxidoreductase, disease mutation, amyotrophic lateral sclero antioxidant; HET: SO4; 1.00A {Homo sapiens} PDB: 2wyz_A* 2wz0_A* 2wz5_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A 3re0_A 2wko_A 3gzo_A 2wz6_A* 3gzp_A 1uxl_A ...
Probab=24.55 E-value=52 Score=25.96 Aligned_cols=23 Identities=4% Similarity=0.173 Sum_probs=19.1
Q ss_pred cEEEEEEEeCCCCcCceeecCCC
Q 020366 207 EYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 207 ~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
..|++.|.+.....|-||+|-.-
T Consensus 29 v~v~~~i~GL~pG~hg~HIHe~g 51 (153)
T 2wyt_A 29 VKVWGSIKGVTEGLHGFHVHEFG 51 (153)
T ss_dssp EEEEEEEESCCSEEEEEEEESCC
T ss_pred EEEEEEECCCCCcceeEEEecCC
Confidence 57888888888888999999654
No 137
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=24.21 E-value=68 Score=22.71 Aligned_cols=24 Identities=17% Similarity=0.414 Sum_probs=19.1
Q ss_pred EEEEeCCeEEEEEecCccceeeEe
Q 020366 14 NFRIQGHTMKLVEVEGSHTIQNIY 37 (327)
Q Consensus 14 ~~sidgh~l~VIa~DG~~v~P~~v 37 (327)
.+.++|..|+|+++||.-++-+.+
T Consensus 67 ~v~~~~~~f~V~~~d~~rI~~V~v 90 (94)
T 2oai_A 67 YFDWAGWRIEIVDLDGARIDXLLL 90 (94)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEE
T ss_pred EEEECCEEEEEEEEcCCEEEEEEE
Confidence 467899999999999987655443
No 138
>1z9n_A Superoxide dismutase [CU-ZN]; Cu-Zn SOD, SOD, oxidoreductase; HET: HEM; 1.50A {Haemophilus ducreyi}
Probab=23.75 E-value=43 Score=27.21 Aligned_cols=27 Identities=4% Similarity=0.080 Sum_probs=21.3
Q ss_pred ecCCcEEEEEEEeCCCCcCceeecCCC
Q 020366 203 VNLHEYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 203 ~~~g~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
.+.|..|++.|.+.....|-||+|-.-
T Consensus 49 ~~~gv~v~~~l~GL~pG~HGfHIHe~G 75 (177)
T 1z9n_A 49 SAYGLVFTPKLHDLAHGLHGFHIHEKP 75 (177)
T ss_dssp ETTEEEEEEEECSCCSEEECEEEESSS
T ss_pred cCCcEEEEEEEeCCCCCceeEEEecCC
Confidence 345667888888888888999999764
No 139
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=23.49 E-value=76 Score=22.25 Aligned_cols=24 Identities=8% Similarity=0.111 Sum_probs=19.2
Q ss_pred EEEEeCCeEEEEEecCccceeeEe
Q 020366 14 NFRIQGHTMKLVEVEGSHTIQNIY 37 (327)
Q Consensus 14 ~~sidgh~l~VIa~DG~~v~P~~v 37 (327)
.+.++|..|+|+++||.-++-+.+
T Consensus 64 ~v~~~~~~f~V~~~d~~rI~~v~v 87 (91)
T 2pli_A 64 KVLIGGLQFTVARADNRRLHTLMA 87 (91)
T ss_dssp EEEETTEEEEEEEECSSCEEEEEE
T ss_pred EEEECCEEEEEEEEeCCEEEEEEE
Confidence 467889999999999988765543
No 140
>3f7l_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor), greek KEY beta-barrel, amyloid filaments, ALS, FALS; 0.99A {Alvinella pompejana} SCOP: b.1.8.1 PDB: 3f7k_A
Probab=23.07 E-value=51 Score=25.97 Aligned_cols=26 Identities=4% Similarity=0.029 Sum_probs=20.8
Q ss_pred cCCcEEEEEEEeCCCCcCceeecCCC
Q 020366 204 NLHEYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 204 ~~g~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
..+..|++.|.+.....|-||+|-.-
T Consensus 24 ~~~v~v~~~l~GL~pG~hgfHIHe~G 49 (152)
T 3f7l_A 24 GDMVTVTGEITGLTPGKHGFHVHEFG 49 (152)
T ss_dssp TTEEEEEEEEESCCSEEEEEEEESCC
T ss_pred CCcEEEEEEEECCCCCcccEEEeecC
Confidence 44567888899988888999999754
No 141
>2q2l_A Superoxide dismutase; SOD, SAD, antioxidant, oxidoreductase, metal-binding; 2.37A {Potentilla atrosanguinea}
Probab=23.00 E-value=55 Score=25.76 Aligned_cols=26 Identities=4% Similarity=0.072 Sum_probs=20.6
Q ss_pred cCC-cEEEEEEEeCCCCcCceeecCCC
Q 020366 204 NLH-EYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 204 ~~g-~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
+.| ..|++.|.+.....|-||+|-.-
T Consensus 24 ~~g~v~v~~~i~GL~pG~hg~HIHe~G 50 (152)
T 2q2l_A 24 GDGPTTVTGNISGLKPGLHGFHVHALG 50 (152)
T ss_dssp TTSCEEEEEEEESCCSEEEEEEEESCC
T ss_pred CCCcEEEEEEECCCCCcceeEEEeecC
Confidence 345 57888888888889999999653
No 142
>3pu7_A Superoxide dismutase [CU-ZN], chloroplastic; oxidoreductase, antioxidant, metal-binding, DIS bond, transit peptide; 1.80A {Solanum lycopersicum} PDB: 3km1_A 3km2_A 3mkg_A 3hog_A 3s0p_A 1srd_A
Probab=22.85 E-value=62 Score=25.54 Aligned_cols=27 Identities=15% Similarity=0.242 Sum_probs=21.0
Q ss_pred ecCC-cEEEEEEEeCCCCcCceeecCCC
Q 020366 203 VNLH-EYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 203 ~~~g-~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
...+ ..|++.|.+.....|-||+|-.-
T Consensus 24 ~~~g~v~v~~~i~GL~pG~hgfHIHe~G 51 (154)
T 3pu7_A 24 DDDGPTTVNVRITGLAPGLHGFHLHEYG 51 (154)
T ss_dssp ETTSCEEEEEEEESCCSEEEEEEEESCC
T ss_pred eCCCcEEEEEEEECCCCCcccEEEeecC
Confidence 3444 47888999988888999999753
No 143
>3kbe_A Superoxide dismutase [CU-ZN]; Cu-Zn superoxide dismutase, antioxidant, oxidoreductase, NEM disulfide bond, metal-binding; 1.10A {Caenorhabditis elegans} SCOP: b.1.8.1 PDB: 3kbf_A
Probab=22.77 E-value=66 Score=25.49 Aligned_cols=23 Identities=17% Similarity=0.328 Sum_probs=19.5
Q ss_pred cEEEEEEEeCCCCcCceeecCCC
Q 020366 207 EYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 207 ~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
..|++.|.+.....|-||+|-.-
T Consensus 28 v~v~~~l~GL~pG~hgfHIHe~G 50 (157)
T 3kbe_A 28 AVIEGEIKGLTPGLHGFHVHQYG 50 (157)
T ss_dssp CEEEEEEESCCSSCEEEEEESCC
T ss_pred EEEEEEEECCCCCcccEEEeecC
Confidence 57888999998889999999753
No 144
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=22.56 E-value=78 Score=21.89 Aligned_cols=24 Identities=8% Similarity=-0.021 Sum_probs=18.9
Q ss_pred EEEEeCCeEEEEEecCccceeeEe
Q 020366 14 NFRIQGHTMKLVEVEGSHTIQNIY 37 (327)
Q Consensus 14 ~~sidgh~l~VIa~DG~~v~P~~v 37 (327)
.+.++|..|+|+++|+.-++-+.+
T Consensus 57 ~v~~~~~~f~V~~~~~~rI~~v~v 80 (86)
T 2p4p_A 57 FVLYDXYXFEIIDTENFRIDQLMV 80 (86)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEE
T ss_pred EEEEeeEEEEEEEccCCEEEEEEE
Confidence 467889999999999987655443
No 145
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=22.31 E-value=1.4e+02 Score=24.75 Aligned_cols=13 Identities=0% Similarity=-0.128 Sum_probs=5.8
Q ss_pred eeEEecCCCcEEE
Q 020366 2 FRISNVGLSTSFN 14 (327)
Q Consensus 2 lRliNa~~~~~~~ 14 (327)
+++.|+|....|.
T Consensus 110 l~~~~aG~~~~~l 122 (242)
T 3pu9_A 110 VLVTRNSEVPMLL 122 (242)
T ss_dssp EEEEEESCCCEEE
T ss_pred EEEEeCCCCcEEE
Confidence 3444554444433
No 146
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=22.24 E-value=53 Score=23.04 Aligned_cols=24 Identities=13% Similarity=0.192 Sum_probs=19.3
Q ss_pred EEEEeCCeEEEEEecCccceeeEe
Q 020366 14 NFRIQGHTMKLVEVEGSHTIQNIY 37 (327)
Q Consensus 14 ~~sidgh~l~VIa~DG~~v~P~~v 37 (327)
.+.++|..|+|+++||.-++-+.+
T Consensus 63 ~v~~~~~~f~V~~~d~~rI~~v~v 86 (90)
T 2p13_A 63 QITVDGLIFEIVSVNKHNIGKVRV 86 (90)
T ss_dssp EEEETTEEEEECCBCSSSBCEEEE
T ss_pred EEEECCEEEEEEEEeCCEEEEEEE
Confidence 467889999999999988765544
No 147
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=21.96 E-value=80 Score=22.15 Aligned_cols=24 Identities=21% Similarity=0.227 Sum_probs=19.1
Q ss_pred EEEEeCCeEEEEEecCccceeeEe
Q 020366 14 NFRIQGHTMKLVEVEGSHTIQNIY 37 (327)
Q Consensus 14 ~~sidgh~l~VIa~DG~~v~P~~v 37 (327)
.+.++|..|+|+++||.-++-+.+
T Consensus 65 ~v~~~~~~f~V~~~~~~rI~~V~v 88 (92)
T 2o3g_A 65 FADFHGWRFEVVEKEGQRIERVKI 88 (92)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEE
T ss_pred EEEECCEEEEEEEeeCCEEEEEEE
Confidence 467889999999999988755443
No 148
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Probab=27.20 E-value=19 Score=32.40 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=49.3
Q ss_pred EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366 200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279 (327)
Q Consensus 200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W 279 (327)
-+.++.|+.|++.+++.+-. |.|+|=+-| + ..|. -||-...+.|.++.||.+
T Consensus 142 ~l~~P~~~~v~~~~ts~DVi--------Hsf~vp~~~-~----------------k~d~---~PG~~~~~~~~~~~~G~y 193 (337)
T 2yev_B 142 ELVLPAGVPVELEITSKDVI--------HSFWVPGLA-G----------------KRDA---IPGQTTRISFEPKEPGLY 193 (337)
Confidence 36789999999999876543 466665544 1 1232 134445678899999999
Q ss_pred EEEeeehhhh-ccCceEEEEEEcC
Q 020366 280 NMRSAIWERQ-YLGQQFYLKVWNA 302 (327)
Q Consensus 280 ~~HCHi~~h~-~~Gm~~~~~v~~~ 302 (327)
...|--.-.. |..|...+.+..+
T Consensus 194 ~g~c~e~cG~~Hs~M~~~v~~vs~ 217 (337)
T 2yev_B 194 YGFCAELCGASHARMLFRVVVLPK 217 (337)
Confidence 9999864433 5556666655443
No 149
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=21.43 E-value=87 Score=22.01 Aligned_cols=23 Identities=4% Similarity=0.085 Sum_probs=18.6
Q ss_pred EEEEeCCeEEEEEecCccceeeE
Q 020366 14 NFRIQGHTMKLVEVEGSHTIQNI 36 (327)
Q Consensus 14 ~~sidgh~l~VIa~DG~~v~P~~ 36 (327)
.+.++|..|+|+++||.-++-+.
T Consensus 66 ~v~~~~~~f~V~~~d~~rI~~V~ 88 (93)
T 2nqw_A 66 TAVYEPFRFQVTQMDKRRIIEIK 88 (93)
T ss_dssp EEEETTEEEEEEEECSSSEEEEE
T ss_pred EEEECCEEEEEEEeeCCEEEEEE
Confidence 46789999999999998865443
No 150
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=21.42 E-value=1.5e+02 Score=22.44 Aligned_cols=48 Identities=15% Similarity=0.057 Sum_probs=34.3
Q ss_pred cCCCeEEEEec--cCCCCccccccCC-----CCCCCceeeEEeCCCCEEEEEEEe
Q 020366 226 DGYDFWVVGYG--SGQWAAEKRRTYN-----LADTLTRHTAQVYPQSWTVILVSL 273 (327)
Q Consensus 226 HG~~F~Vl~~g--~G~~~~~~~~~~n-----~~~p~~rDTv~vp~~g~~virf~a 273 (327)
-|...+|++.- .|.|++.....+. -..|.|+=++.||.+..+..+|..
T Consensus 21 ~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 21 PGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp TTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 46677888764 5899876432222 256899999999988777777765
No 151
>1xtm_B Hypothetical superoxide dismutase-like protein YO; SOD, Cu-Zn SOD, SOD-like, superoxide dismutase mutants, STRU genomics, unknown function; 1.60A {Bacillus subtilis} PDB: 1xtl_B 1s4i_B 1u3n_A
Probab=21.19 E-value=62 Score=26.15 Aligned_cols=26 Identities=8% Similarity=0.118 Sum_probs=20.9
Q ss_pred cCCcEEEEEEE--eC-CCCcCceeecCCC
Q 020366 204 NLHEYIEVVFQ--NN-EKTMQSWHLDGYD 229 (327)
Q Consensus 204 ~~g~~v~ivi~--N~-~~~~HP~HLHG~~ 229 (327)
+.+..|++.|. +. ....|-||+|-.-
T Consensus 42 ~~~v~v~~~i~~~GL~~pG~hg~HIHe~G 70 (175)
T 1xtm_B 42 SDDEGLDIHISANSLRPGASLGFHIHEKG 70 (175)
T ss_dssp CSSSSEEEEEEECSCCTTCEECEEEESSC
T ss_pred CCCEEEEEEEEcCCCCCCCcceEEEecCC
Confidence 45678888999 88 7789999999654
No 152
>4a7u_A Superoxide dismutase [CU-ZN]; oxidoreductase, amyotrophic lateral sclerosis, antioxidant, mutation, metal-binding, Zn superoxide dismutase; HET: ALE; 0.98A {Homo sapiens} PDB: 3ecv_A 1uxl_A* 4a7g_F* 4a7q_A* 4a7t_A* 4a7s_A* 4a7v_A* 4b3e_A 4a7g_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A ...
Probab=20.57 E-value=44 Score=26.39 Aligned_cols=23 Identities=4% Similarity=0.162 Sum_probs=19.3
Q ss_pred cEEEEEEEeCCCCcCceeecCCC
Q 020366 207 EYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 207 ~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
..|++.|.+.....|-||+|-.-
T Consensus 29 v~v~~~i~GL~pG~hg~HIHe~G 51 (153)
T 4a7u_A 29 VKVWGSIKGLTEGLHGFHVHEFG 51 (153)
T ss_dssp EEEEEEEESCCSEEEEEEEESCC
T ss_pred EEEEEEEECCCCCcccEEEeecC
Confidence 56888899988888999999754
No 153
>3arc_O Photosystem II manganese-stabilizing polypeptide; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3bz1_O* 2axt_O* 3bz2_O* 3prq_O* 3prr_O* 1s5l_O* 3kzi_O* 3a0b_O* 3a0h_O*
Probab=20.28 E-value=1.5e+02 Score=25.12 Aligned_cols=39 Identities=15% Similarity=0.344 Sum_probs=30.7
Q ss_pred EEEe-CCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCC
Q 020366 15 FRIQ-GHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ 56 (327)
Q Consensus 15 ~sid-gh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~ 56 (327)
|.++ +-.++..+-||..-.|+.| .|.-|||+=++...++
T Consensus 82 l~v~~dG~l~f~E~dGiDfa~~TV---qlPGGErVPFlFTvK~ 121 (243)
T 3arc_O 82 LKVNSDGSLTFVEEDGIDFQPVTV---QMAGGERIPLLFTVKN 121 (243)
T ss_dssp EEECTTSCEEEEEEEEECEEEEEE---ECTTSCEEEEEEECTT
T ss_pred EEECCCCceEEEEecCeecceEEE---EcCCCcccceEeeehh
Confidence 4444 3367888899998888765 7899999999999886
No 154
>3l9y_A Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY-barrel, antioxidant, copper, cytoplasm, metal- binding, oxidoreductase; 1.80A {Bombyx mori} SCOP: b.1.8.1 PDB: 3l9e_A
Probab=20.27 E-value=45 Score=26.36 Aligned_cols=24 Identities=13% Similarity=0.177 Sum_probs=19.8
Q ss_pred CcEEEEEEEeCCCCcCceeecCCC
Q 020366 206 HEYIEVVFQNNEKTMQSWHLDGYD 229 (327)
Q Consensus 206 g~~v~ivi~N~~~~~HP~HLHG~~ 229 (327)
+..|++.|.+.....|-||+|-.-
T Consensus 27 ~v~v~~~l~GL~pG~hg~HIHe~G 50 (154)
T 3l9y_A 27 PVVVSGEVQGLTKGKHGFHVHEFG 50 (154)
T ss_dssp CEEEEEEEESCCSEEEEEEEESCC
T ss_pred cEEEEEEEECCCCCCccEEEEecC
Confidence 457888899988888999999754
Done!