BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020367
(327 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 239 bits (611), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 168/242 (69%), Gaps = 2/242 (0%)
Query: 82 DGYASKSEDDDHSNSFLNVFLKKFHALYRFMRAYACAGVIIATTSNSLLPVQTLADLTPA 141
+ A + E D SNS F A YRF R + G +++ S S L V+ ++D++P
Sbjct: 75 NATAGQPEAFD-SNSKQKSFRDSLDAFYRFSRPHTVIGTVLSILSVSFLAVEKVSDISPL 133
Query: 142 YFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALM 201
FTG++EA+V A++M+IY+V +NQLSDVE+DKVNKPYLPLASGE S+ TGIAI + ++M
Sbjct: 134 LFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSIM 193
Query: 202 SLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVY 261
S ++ S P WA+ +GTAYS+ LPLLRWK + +AA C++++ ++ Q Y
Sbjct: 194 SFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFY 253
Query: 262 VHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKE 321
+HIQ +V GRP+ +FTRPL+FATAF+S F VVIA KD+ D++GDK FGI++ SV LG++
Sbjct: 254 LHIQTHVFGRPI-LFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQK 312
Query: 322 RV 323
RV
Sbjct: 313 RV 314
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 162/253 (64%), Gaps = 4/253 (1%)
Query: 74 HRAPVTLQD--GYASKSEDDDH-SNSFLNVFLKKFHALYRFMRAYACAGVIIATTSNSLL 130
HR + D G +S + H S+S A YRF R + G ++ S SLL
Sbjct: 74 HRPTSSSADASGQPLQSSAEAHDSSSIWKPISSSLDAFYRFSRPHTVIGTALSIVSVSLL 133
Query: 131 PVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGT 190
V+ L+D++P + TGL+EA+V A+ M+IY+V +NQL D+E+DKVNKP LPLASGE S T
Sbjct: 134 AVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPAT 193
Query: 191 GIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVS 250
G+A+ A A MS + S P A+ +GTAYS+ LP LRWK ++ +AA C+++
Sbjct: 194 GVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILA 253
Query: 251 LNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFG 310
+ ++ Q ++HIQ +V RP +FTRPL+FATAF++ F VVIA KD+ D++GD+ FG
Sbjct: 254 VRAVIVQLAFFLHIQTFVFRRP-AVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFG 312
Query: 311 IKTLSVMLGKERV 323
IK+ SV LG+++V
Sbjct: 313 IKSFSVRLGQKKV 325
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 143/232 (61%), Gaps = 8/232 (3%)
Query: 92 DHSNSFLNVFLKKFHALYRFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGLMEALV 151
D N L++F Y+F R YA +++ T SL+ V+ L+DL+ A+F G ++ +V
Sbjct: 108 DSVNDALDIF-------YKFCRPYAMFTIVLGATFKSLVAVEKLSDLSLAFFIGWLQVVV 160
Query: 152 PAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRS 211
+ +HI+ V +NQL D+E+DK+NKP LPLASG++S + IT +S ++ L +A ++ S
Sbjct: 161 AVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAWIVDS 220
Query: 212 PPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGR 271
P W V V +AY+V LPLLRWK L A ++ + ++H+Q V R
Sbjct: 221 WPLFWTVFISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKR 280
Query: 272 PLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERV 323
P F RPL+F TA +S + +VIA KD+ D++GD+KFGI++LS+ LG +RV
Sbjct: 281 P-TTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRV 331
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 133/216 (61%), Gaps = 1/216 (0%)
Query: 107 ALYRFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQL 166
A Y F Y G+ + S+SLL V+ L+D++ ++ G+++ ++P + + IY+ +NQL
Sbjct: 115 AFYWFSYPYTMIGITLCAFSSSLLAVEKLSDISLSFLIGVLQGVLPQLFIEIYLCGVNQL 174
Query: 167 SDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGT 226
D+E+DK+NKP+LP+ASG+ S TG+ I+ A +S + + S P I ++ T
Sbjct: 175 YDLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWITGSWPLICNLVVIASSWT 234
Query: 227 AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAF 286
AYS+ +PLLRWK F+AA CM+S L + H+Q VL RP+ F R L F AF
Sbjct: 235 AYSIDVPLLRWKRYPFVAAMCMISTWALALPISYFHHMQTVVLKRPIG-FPRSLGFLVAF 293
Query: 287 ISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 322
++ + + +A KD+ DV+GDK+ GI + +V LG++R
Sbjct: 294 MTFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKR 329
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 133/244 (54%), Gaps = 16/244 (6%)
Query: 88 SEDDDHSNSFLNVFLKKFHALYRFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGL- 146
+E DD L+ + +A +RF+R + G + +T+ L + L + T L
Sbjct: 77 AESDD---PVLDRIARFQNACWRFLRPHTIRGTALGSTA---LVTRALIENTHLIKWSLV 130
Query: 147 ---MEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSL 203
+ L+ + + Y+V INQ+ D+ +DKVNKPYLP+A+G++S+ + + + A+ L
Sbjct: 131 LKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGL 190
Query: 204 AYAVMIRSPPFIWAVIAW-IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYV 262
V PFI ++ + +F+GT YSV P LR K A + ++ G L F VY
Sbjct: 191 -LVVGFNFGPFITSLYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY- 246
Query: 263 HIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 322
H + LG P + ++ P+ F T+F++ F +VIA KDL DV+GD+KF I TL+ LG
Sbjct: 247 HATRAALGLPFQ-WSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRN 305
Query: 323 VSKL 326
++ L
Sbjct: 306 IAFL 309
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 10/181 (5%)
Query: 149 ALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTG--IAITLASALMSLAYA 206
LV + + Y+V INQ+ D+ +DKVNKPYLP+A+G++S+ T + + A+A S+
Sbjct: 129 GLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWLLVVLFAAAGFSI--- 185
Query: 207 VMIRSPPFIWAVIAW-IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQ 265
V+ PFI ++ +F+GT YSV P R K A + ++ G L F VY +
Sbjct: 186 VVTNFGPFITSLYCLGLFLGTIYSV--PPFRLKRYPVAAFLIIATVRGFLLNFGVY-YAT 242
Query: 266 KYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVSK 325
+ LG + ++ P+ F T F++ F +VIA KDL DV+GD+K+ I TL+ LG ++
Sbjct: 243 RAALGLTFQ-WSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAF 301
Query: 326 L 326
L
Sbjct: 302 L 302
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 21/164 (12%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN D E+D++N+P PL G + T + +L + LA A++I F +A++A+I
Sbjct: 56 INDYFDYEIDRINRPERPLPRGAMDRRTALWYSLFLFAVGLALALLISLKAFAFALLAYI 115
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 282
+ Y+ +L L + GN +AA V+ P+Y I +G +
Sbjct: 116 TM-FLYAWKLKPLPFIGNIAVAALTGVT--------PLYGAIAVGKIG----------LA 156
Query: 283 ATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVS 324
T + F V +A +KD+ DV+GD K G KTL ++LG+ + +
Sbjct: 157 GTLAVCAFLVNVAREIVKDIEDVEGDLKKGAKTLPIILGRRKAA 200
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 30/206 (14%)
Query: 116 ACAGVIIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVN 175
A G +IATT TP +F L+ +V + YV IN + D+EVDK+N
Sbjct: 22 AFMGYVIATTWK----------FTPLFFLPLL--VVSLIAAGGYV--INDVYDIEVDKIN 67
Query: 176 KPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLL 235
KP PL SG I++ ++ + L ++ + PF +A+I + + Y+ L L
Sbjct: 68 KPERPLPSGRIAVNIARRFSIVLFAVGLIISIPLGLIPFGFALITIVLL-YEYARSLKKL 126
Query: 236 RWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIA 295
GN +V+L L+ + Y + G L F P T +I F +
Sbjct: 127 GLVGN------FIVALTSALSAY--YGGLAS---GSLLGNFIIP----TIYIFFFTLSRE 171
Query: 296 FIKDLHDVDGDKKFGIKTLSVMLGKE 321
F+K + D++GDK+ G+ TL+V LG++
Sbjct: 172 FVKGIEDIEGDKRNGVNTLAVKLGEK 197
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 29/168 (17%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASAL--MSLAYAVMIRSPPFIWAVIA 220
IN D E+DK+N+P PL G +MG +A+ + L + LA A MI FI VIA
Sbjct: 56 INDYFDYEIDKINRPERPLPRG--AMGRKVALYYSMLLFAVGLALAYMINIYAFILGVIA 113
Query: 221 WI--FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTR 278
++ F+ Y+ +L L + GN +A GL P+Y + LG
Sbjct: 114 YVTMFI---YAWKLKPLPFVGNIVVA--------GLTGATPLYGAVAVEHLG-------- 154
Query: 279 PLMFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVS 324
+ I F V +A IKD+ DV+GD G KTL ++ GK+R +
Sbjct: 155 --LAGYLAICAFLVNVAREVIKDIEDVEGDMAKGAKTLPIIWGKKRAA 200
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D E+D +NKPY P+ SG IS + I +A +L +A ++ + F+ V A+
Sbjct: 54 AINDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSLFGIALSIFLGFIEFL-IVTAF 112
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
AY+ RW + + +VSL T ++ + L + IF+
Sbjct: 113 SLSWYAYA------RWLKRTGVPGNALVSLGVAFTL--IFGSLAAGNLTNKVIIFS---- 160
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVSKLI 327
+ AF S ++ F+K + D+ GD+ G++T++V +G +R L+
Sbjct: 161 -SVAFTS--NLIREFVKAVEDLPGDRAHGVRTIAVRIGVKRTGILV 203
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN DVE+DK+N+P P+ G I+ + + L A+++ F++A+ A+
Sbjct: 56 INDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAY- 114
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVY--VHIQKYVLGRPLEIFTRPL 280
F+ Y+ +L L + GN V++ L P+Y V + + L L I
Sbjct: 115 FLTFVYAWKLKPLPFIGN--------VTVALLTAATPIYGAVGVGRIDLAGYLAI----- 161
Query: 281 MFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 322
F V ++ +KD+ D +GDK+ G +TL +M+GK++
Sbjct: 162 -------CAFLVNVSREIMKDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN + D+E+DK+NKP PL SG I + ++++ L+ + +V++ FI A++ +
Sbjct: 56 INDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLT-V 114
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVS-LNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
Y+ L GN +A +S G L F +V+ R L+
Sbjct: 115 LALYYYAKDLKKQGLVGNLIVALTSALSAFYGGLAFFE-----GSWVI--------RTLI 161
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER---VSKLI 327
T +I F + F+K + DV GD G+KTL+V +G E+ +SK+I
Sbjct: 162 -PTLYIFFFTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKTWFISKII 209
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN D E+DK+N+P PL G +S + ++A + A I F+ A++A++
Sbjct: 56 INDYFDYEIDKINRPERPLPRGAMSRKAALWYSVALFATGIVLAWFINIWDFLLAIVAYV 115
Query: 223 --FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 280
F+ Y+ +L + + GN +A SL G P+Y I +G
Sbjct: 116 TMFI---YAWKLKPMPFIGNVVVA-----SLTG---ATPLYGAIAVGEIG---------- 154
Query: 281 MFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVS 324
+ T + F V +A IKD+ D++GD G KTL +++G++R +
Sbjct: 155 LAGTLALCAFLVNVAREVIKDIEDIEGDMAKGAKTLPILIGRKRAA 200
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 18/169 (10%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
A N D VD VN+P P+ SG I G+ I L ++SLA M+ P A +
Sbjct: 69 AANNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWML-GPWGFGATVFG 127
Query: 222 IFVGTAYSVQLPLLR---WKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRP-LEIFT 277
+ AYSV+ L+ W G L A C L P + G P I T
Sbjct: 128 VLAAWAYSVEPIRLKRSGWWGPG-LVALCYEGL-------PWFTGAAVLSAGAPSFFIVT 179
Query: 278 RPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVSKL 326
L++A I + D ++GD++ G+++L VMLG E +KL
Sbjct: 180 VALLYAFGAHG-----IMTLNDFKALEGDRQHGVRSLPVMLGPEVAAKL 223
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
A N D VD +N+P+ P+ SG I G+ I +A +L+SL W + +W
Sbjct: 70 AANDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVG---------WQLGSW 120
Query: 222 IFVGT--------AYSVQLPLLR---WKGNSFLAAFCMVSLNGL--LTQFPVYVHIQKYV 268
FV T AYSV+ L+ W G + ++ GL +T V +
Sbjct: 121 GFVATLLGVAAAWAYSVEPIRLKRSGWWGPGLVG----LAYEGLPWITGAAVLLATADTS 176
Query: 269 LGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVSKL 326
G P+ +M AT + + I I D ++GD+K GIK+L + G E +K+
Sbjct: 177 PGFPI------VMMATLY-ALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKI 227
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 21/166 (12%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN D E+DK+N+P PL G +S + ++ +++ A +I FI+A+ A++
Sbjct: 56 INDYFDYEIDKINRPNRPLPRGALSKNIALVYGISLGGVAILIAYLINFEAFIFALGAYL 115
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 282
+ Y+ +L K F+ + +L G+ P+Y I +G +
Sbjct: 116 LM-YLYARKL-----KPQPFIGNLVVATLTGIT---PIYGAIAVGKIG----------LA 156
Query: 283 ATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVSKL 326
+ F V +A KD+ D++GDK G KTL ++ G E SK+
Sbjct: 157 GYLALCAFLVNVAREIFKDIEDIEGDKAQGAKTLPIVWGIESSSKI 202
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 164 NQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMS--LAYAVMIRSPPFIWAVIAW 221
N D E+DK+N+P PL G +S + L + LAY + IR+ F++A IA+
Sbjct: 57 NDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRA--FVFATIAY 114
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
F+ Y +L L GN +AA + P+Y I +G +
Sbjct: 115 -FLTFLYGWKLKPLPLVGNITVAALTAAT--------PIYGAIGVGRIG----------L 155
Query: 282 FATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVS 324
I F V ++ +KD+ D++GDK G +TL +++G+++ +
Sbjct: 156 AGYLAICAFLVNVSREIMKDIEDIEGDKALGARTLPIIIGEKKAA 200
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN DVE+D+VN+P P+ G I + L ++ LA A + ++A+ A+
Sbjct: 56 INDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYA 115
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 282
Y+ +L L + GN V++ L P+Y + +G +
Sbjct: 116 LT-FIYAWKLKPLPFIGN--------VAVALLTAATPIYGALGVGRVG----------LA 156
Query: 283 ATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVS 324
I F V ++ +KD+ D++GD K G KTL +++GK R +
Sbjct: 157 GYLAICAFLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAA 200
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 110 RFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSDV 169
+ +R + G + L+ Q +L + L+ L+ A YV IN + DV
Sbjct: 8 QLVRIHNVIGAALGAIMGFLVSSQWYLELKGILLSALVVGLIAA---GGYV--INDVYDV 62
Query: 170 EVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYS 229
E+DK+NKPY P+ SG+IS+ A+++A ++ +A ++++ + A++ I + Y+
Sbjct: 63 EIDKINKPYRPIPSGKISVNKAKALSIALFIIGIALSILLNIYALVIALVTAIGL-IYYA 121
Query: 230 VQLPLLRWKGNSFLAAFCMVSL-NGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFIS 288
L + GN +A +S+ G L F ++L ++ T +
Sbjct: 122 KDLKKTGFYGNLLVATTTALSIFYGGLAFFS-----DNWLL---------RIIIPTLYAF 167
Query: 289 CFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 322
++ +K + D +GD +KTL+ LG +
Sbjct: 168 FLTLIREIVKGIEDYNGDSLNNVKTLATTLGINK 201
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 70/244 (28%)
Query: 110 RFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSD- 168
MRA CA A L+ L+ +P L + + ++ + A N L+D
Sbjct: 6 ELMRAGNCAMAAFAGLIGVLIAYNILSSASPYVSLSLFDTSLIFAIVFLVTGAGNGLNDY 65
Query: 169 --VEVDKVNKPYLPLASGEISMG-----------TGIA-----------ITLASALMSLA 204
+E+DKVNKP P+ SG+IS+ TGI I L ++++ +
Sbjct: 66 FDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAFLVNPLCGIIALFNSMVLIL 125
Query: 205 YAVMIRSPPFIW-AVIAWIFVGTAYSVQLPLLRWKGNSFL---AAFCMVSLNGLLTQFPV 260
YA ++ PF A + ++ G++FL A F M L L+ F
Sbjct: 126 YAQSLKRTPFFGNASVGYL---------------TGSTFLFGGAVFGMAGLQALVVLF-- 168
Query: 261 YVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGK 320
L L R + +KD+ D+ GDKK G +TL +++G
Sbjct: 169 --------LLATLATIAREI----------------VKDVEDIVGDKKDGARTLPILIGA 204
Query: 321 ERVS 324
++ S
Sbjct: 205 KKAS 208
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 159 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA- 217
Y IN D ++D +N+PY P+ SG IS I A L L ++ +WA
Sbjct: 139 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLD----VWAG 194
Query: 218 ----VIAWIFVGT---AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 270
+I ++ VG +Y P L+ K N ++ F + + Y+ + +
Sbjct: 195 HDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGA---------SYIGLPWWAGQ 245
Query: 271 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKE 321
T ++ T+ S + IA + D V+GD+ G+++L V G E
Sbjct: 246 ALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGME 296
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN D E+D++N P P+ SG+I + + +L L+S+ +I I ++ I
Sbjct: 51 INDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFIISLENGIVVILCTI 110
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 282
+ Y+ L K F+ C+ L GL F + + LG L F +
Sbjct: 111 LM-IIYAYDL-----KQRCFIGNLCVAILTGLTFVFGGLIT-KDVNLGFILGFFAFLMTL 163
Query: 283 ATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVSKL 326
+ IKD+ D++GDKK TL ++ G ++ L
Sbjct: 164 SR----------EIIKDIEDIEGDKKEDAHTLPIIYGTKKAVML 197
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 21/171 (12%)
Query: 159 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA- 217
Y IN D ++D +N+PY P+ SG IS I L L ++ IWA
Sbjct: 141 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLD----IWAG 196
Query: 218 ----VIAWIFVGT---AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 270
+I ++ +G +Y P L+ K N ++ F + + Y+ + +
Sbjct: 197 HDFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGA---------SYIGLPWWAGQ 247
Query: 271 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKE 321
T ++ T S + IA + D ++GD+ G+++L V G E
Sbjct: 248 ALFGTLTPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVAFGME 298
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 43/174 (24%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGT-----------GIAITLASALMSLAYAVMIRS 211
IN + DVE+D++N+P P+ +G+IS+ GIAI + + LA A++
Sbjct: 54 INDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIATLTTTLCLAIAIINSV 113
Query: 212 PPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQF-PVYVHIQKYVLG 270
++AV R K L + L G + F + I+ V
Sbjct: 114 ILIVYAV-----------------RLKRTPVLGNVAVAYLAGSVFLFGGAFAGIEGLVRN 156
Query: 271 RPLEIFTRPLMFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 322
L T F IA +KD DVDGD G +TL +++G +
Sbjct: 157 LSLAAIT------------FLATIARELLKDAEDVDGDAAGGARTLPMIVGVRK 198
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D ++D +N+P P+ G +S A+ + AL ++A + + P A+ A
Sbjct: 55 AINDYFDRDIDAINEPDRPIPRGAVSPRG--ALVYSVALFAVAVVLTLLLPWLAIAIAAI 112
Query: 222 IFVG-TAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 280
V AY+ L GN+ +A L G +++ V G ++ +
Sbjct: 113 NLVALVAYTEVFKGLPGVGNALVA-----YLTG-----STFLYGGAAVGG---DLAAVVV 159
Query: 281 MFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 322
+FA A +C + +KD+ D+DGD+ G++TL +++G+ R
Sbjct: 160 LFALA--ACATMAREIVKDVEDIDGDRAEGLRTLPIVIGERR 199
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
A+N + D+E+DK+NKP PL S +IS+ + T+ S L+ ++ ++I I IA
Sbjct: 58 ALNDIQDIEIDKINKPNRPLPSNKISLKSA---TIFSYLLMIS-GIIISLFNMICFAIAL 113
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
I + + L ++K N + + L G +++ V + + ++
Sbjct: 114 I---NSIVLYLYAKKYKRNKIIGNLIVAYLTG-----SIFIFGGASVGNVEITL----IL 161
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERV 323
F A + + I IKD D+DGDK G+ +L + GK +
Sbjct: 162 FLCALFATWSREI--IKDYEDLDGDKSEGVISLPIKYGKNSI 201
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 43/172 (25%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D +DK+N+P P+ G IS I S + +A V P I V+A
Sbjct: 61 AINDYFDRAIDKINRPMRPIPRGAISERGAIVF---SGFLFVAAVVSTSVLPLIAIVLAL 117
Query: 222 --IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRP 279
+ AY+ L GN+ +A Y+ ++ G
Sbjct: 118 MNLLALVAYTELFKGLPGVGNAIVA----------------YLTGSTFLFGAA------- 154
Query: 280 LMFATAFISCFCVVIAFI------------KDLHDVDGDKKFGIKTLSVMLG 319
A I+ F VV+ FI KD+ D+DGD+K G++TL +++G
Sbjct: 155 ---AIGRITDFGVVVLFILAALATATREIIKDIEDLDGDRKEGLQTLPIVIG 203
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 21/161 (13%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D EVD VN+P P+ SG +S + L + + A +I
Sbjct: 51 AINDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMATVINR--------MC 102
Query: 222 IFVGTAYSVQLPLLRW--KGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRP 279
+ + SV L L W KG + MVS Y+ ++ G + P
Sbjct: 103 LAIAALNSVLLYLYSWRLKGTPLIGNV-MVS----------YLVGSCFLFGAAVGQRPAP 151
Query: 280 LMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGK 320
++ +V +KDL DV+GD G+KTL + G+
Sbjct: 152 AVWLFLLAFLANLVREILKDLEDVEGDAALGLKTLPIAYGE 192
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 21/171 (12%)
Query: 159 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA- 217
Y IN D ++D +N+PY P+ SG IS I L L A ++ +WA
Sbjct: 150 YTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILD----VWAG 205
Query: 218 ----VIAWIFVGT---AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 270
+ ++ +G +Y P L+ K N ++ F + + Y+ + +
Sbjct: 206 HTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGA---------SYISLPWWAGQ 256
Query: 271 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKE 321
T ++ T S + IA + D V+GD+ G+++L V G E
Sbjct: 257 ALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTE 307
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 67/186 (36%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D EVD++N P + G +S +LAY+V++
Sbjct: 56 AINDYFDREVDRINDPDRAIPRGAVS-----------PRGALAYSVVL------------ 92
Query: 222 IFVGTA-YSVQLPLLRWKGNSFLAAFCMVSLN--GLLTQFPVYVHIQKYVLGRPLE---- 274
FVG A + LP+L A C+ +LN GLLT +Y+ GRP
Sbjct: 93 -FVGAAALAATLPVL---------AVCIAALNLAGLLTY-------TQYLKGRPGAGNAL 135
Query: 275 ---IFTRPLMFATAFI---------------SCFCVVIAFIKDLHDVDGDKKFGIKTLSV 316
+ +F A + S F + IKD+ D+ GD+ G++TL V
Sbjct: 136 VAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREV--IKDVEDLAGDRAAGLRTLPV 193
Query: 317 MLGKER 322
++G +R
Sbjct: 194 VVGHQR 199
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 67/186 (36%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D EVD++N P + G +S +LAY+V++
Sbjct: 56 AINDYFDREVDRINDPDRAIPRGAVS-----------PRGALAYSVVL------------ 92
Query: 222 IFVGTA-YSVQLPLLRWKGNSFLAAFCMVSLN--GLLTQFPVYVHIQKYVLGRPLE---- 274
FVG A + LP+L A C+ +LN GLLT +Y+ GRP
Sbjct: 93 -FVGAAALAATLPVL---------AVCIAALNLAGLLTY-------TQYLKGRPGAGNAL 135
Query: 275 ---IFTRPLMFATAFI---------------SCFCVVIAFIKDLHDVDGDKKFGIKTLSV 316
+ +F A + S F + IKD+ D+ GD+ G++TL V
Sbjct: 136 VAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREV--IKDVEDLAGDRAAGLRTLPV 193
Query: 317 MLGKER 322
++G +R
Sbjct: 194 VVGHQR 199
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 25/169 (14%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAV-IAW 221
+N D+E+DKVN+P P+ SG++S A+ A L + A + IW + IA
Sbjct: 54 LNDYFDLEIDKVNRPDRPIPSGKVSPKG--AVVWAGILFAAGVAAACFTN--IWCLAIAL 109
Query: 222 IFVGTAYSVQLPLL---RWKGNSFLAAFCMVSLNGLLTQFPVY-VHIQKYVLGRPLEIFT 277
+ +V L ++ ++KG FL + L+G + F + V + +++ PL
Sbjct: 110 V------NVVLLIIYAAKFKGIPFLGNLSVAYLSGSIFLFGGFLVGPESFLVMLPL---- 159
Query: 278 RPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVSKL 326
FA F +KD D++GD+ G +TL + +G + S L
Sbjct: 160 ----FAITFFGTLAR--ELLKDAEDIEGDRLGGARTLPMQIGVRKTSVL 202
>sp|A2BIU7|DGGGP_HYPBU Digeranylgeranylglyceryl phosphate synthase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0025 PE=3
SV=1
Length = 302
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAV-MIRSPPFI---WAV 218
IN D+E D V KP+ P+ SG +S G A A L ++ + ++ P FI +AV
Sbjct: 65 INDYYDIETDMVAKPWRPIVSGRVSPGA--ARFYAYMLFTIGLIIALVTCPNFIVFGFAV 122
Query: 219 IAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPL--EIF 276
+ + V YS RW + L +++ N T ++ + G+ + +
Sbjct: 123 LNALLV-HEYS------RWIKRTGLPGNIVIAFNSASTIVFGALYASCMIKGKVVLPSVA 175
Query: 277 TRPLMFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLG 319
P+++A F +V+ F+K + DV GD GI TL+V G
Sbjct: 176 LIPVLYA------FLLVLGREFVKGIEDVKGDAIAGIGTLAVRFG 214
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLA 204
AIN + DVE+D++NKP P+ SG +S+ T A +L+ LM +
Sbjct: 53 AINDVYDVEIDRINKPDRPIPSGAVSLRT--ATSLSYGLMGVG 93
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 37/176 (21%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN DV +D +N+P P+ SG + + A+ + L +L + P I VIA
Sbjct: 69 AINDYFDVRIDSINRPDRPIPSGRMKLKE--ALYFSYTLFALGTLLAFSINP-ICGVIAL 125
Query: 222 ------IFV-----GTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 270
IF GT L + G+SFL + L GL F +++ +
Sbjct: 126 FNSLVLIFYAKTLKGTPLLGNLSIGYLTGSSFLFGASVFGLEGLKALFVLFLLAALAITA 185
Query: 271 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVSKL 326
R + +KD+ D++GDK G TL + +G ++ S L
Sbjct: 186 REI-----------------------VKDIEDMEGDKMEGADTLPLRVGAKKASYL 218
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 34/173 (19%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTG-----IAITLASAL---MSLAYAVMIRSPPF 214
IN D E+D +N+P P+ SG IS G I LAS + + L +++ S
Sbjct: 51 INDYFDHEIDAINRPERPIPSGRISRGVAGVYSIILFALASLMGFYLGLLPGLVVVSSSL 110
Query: 215 IWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLE 274
+ AW R K + + L GL F VLG E
Sbjct: 111 LMVYYAW--------------RLKKRCLVGNITISFLTGLSFVF------GGIVLG---E 147
Query: 275 IFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVSKLI 327
+ L+ AF+ I +KD+ DV+GD+ G TL + G R+S ++
Sbjct: 148 VRASILLGFYAFLMTMAREI--VKDMEDVEGDRAEGATTLPITHGM-RISGVL 197
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 27/166 (16%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D E+D VN+P P+ SG IS + ++A + A +I A++
Sbjct: 52 AINDYFDREIDAVNRPDRPIPSGRISPRAALIWSVALFIAGCLIAGLINQSCLALALLNS 111
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVS-LNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 280
FV Y+ +L L GN ++ + L G L P +
Sbjct: 112 -FVLIIYAARLKGLPVAGNIAISYLTGTTFLFGGLAASPSSI------------------ 152
Query: 281 MFATAFISCFCVVIAF----IKDLHDVDGDKKFGIKTLSVMLGKER 322
TAF+S + +KD+ D+ GD G KTL +GK +
Sbjct: 153 ---TAFLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIGKRK 195
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 38.1 bits (87), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 36/168 (21%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIW-----A 217
IN D E+D +N+P P+ SG+I G + + L+ A++ P +
Sbjct: 54 INDYYDKEIDAINQPDRPIPSGQIIPGHALMYAILLFLIGNGIAILFTPLPLAGIAMGNS 113
Query: 218 VIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMV------SLNGLLTQFPVYVHIQKYVLGR 271
VI W++ ++ + PL+ S+LAA + G+++ FP+ +L R
Sbjct: 114 VILWLY--ASFLKKTPLIGNISVSYLAASIFLFGGAIQGTQGIISVFPIAGATWGVMLAR 171
Query: 272 PLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLG 319
L IKD D+ GD + G +T ++ G
Sbjct: 172 EL-----------------------IKDAEDMPGDNEHGARTFPLLYG 196
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
IN + D+E+D++NKP PL SG+I + + ++ L ++ I I AVI
Sbjct: 60 VINDIFDIEIDRINKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIAVINA 119
Query: 222 IF---VGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTR 278
+F Y P+ GN F + L G V + V G+ +
Sbjct: 120 LFLYLYAKKYKKYKPI----GN-----FIIGYLTG-------SVFLFGGVAGK--NVMPV 161
Query: 279 PLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKE 321
++F + +S + I +KD D++GDKK G+ +L + GK+
Sbjct: 162 VILFLCSLLSIWGREI--VKDFEDMEGDKKEGVISLPIKYGKK 202
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 33/171 (19%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN D +D +N+P P+ SG +S +A + L+ LA +V +P + +
Sbjct: 54 INDYFDAAIDTINRPDRPIPSGAVSRNAALAWAFSLFLLGLAVSVF-TTPLCMGIALVNA 112
Query: 223 FVGTAYSVQLPLLRWKGNS---------FLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPL 273
+ Y+ +L + GN+ FL + LL P+ +L R L
Sbjct: 113 LLLVLYAARLKSTPFFGNAAVAFLSASIFLFGGAYAGWHALLDMLPIAAITFLAMLAREL 172
Query: 274 EIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVS 324
+KD D++GD+ G TL++ +G + +
Sbjct: 173 -----------------------LKDAEDIEGDRAHGADTLAIRIGVRKTA 200
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 35.0 bits (79), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
A+N + D+++DK+NKP P+ S IS+G + +M L + M F+ AV+
Sbjct: 56 ALNDIYDLKIDKINKPKRPIPSKRISLGEARIFSYLLVVMGLIIS-MFNITCFLMAVLNS 114
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
I + S +K N + + L G + F +G I ++
Sbjct: 115 IVLQQYAS------TYKKNKIVGNLIVAYLTGSVFIF------GGIAVG---NIDVTIML 159
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERV 323
F A + + I IKD D++GD K + ++ + G++ +
Sbjct: 160 FLCALFAMWSREI--IKDYEDIEGDIKEKVISIPIKCGEKSI 199
>sp|Q3SZP0|IRF1_BOVIN Interferon regulatory factor 1 OS=Bos taurus GN=IRF1 PE=2 SV=1
Length = 322
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 37 LNRSQEKKYAIKCSQSNSFYNLTNKIASSRNCKPFNSHRAPVTLQDGYASKSEDDDHSNS 96
L +SQ K+ K S+ S KP+ + +P T DG +S + DDHSN
Sbjct: 115 LTKSQRKERKSKSSRD---------ARSKAKKKPYGEY-SPDTFSDGLSSSTLPDDHSNY 164
Query: 97 FLNVFLKKFHALYRFMRAYACAGVIIATTSNSLLPVQTLADLT 139
+ ++ + + R + + +T N +PV+ + D T
Sbjct: 165 TVRSYMGQDLDIERTLTPALSPCGVSSTLPNWSIPVEIVPDST 207
>sp|Q3IHW5|UBIA_PSEHT 4-hydroxybenzoate octaprenyltransferase OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=ubiA PE=3 SV=1
Length = 292
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 42/210 (20%)
Query: 131 PVQTLADLTPAYFT-GLMEALVPA-----------VLMHIYVVAINQLSDVEVDKVNKPY 178
P+ TL L P Y+ L A +P+ V+M IN +D ++D K
Sbjct: 23 PIGTLLLLWPTYWALWLANAGMPSLTNFIVFTLGVVIMRSAGCVINDFADRKIDGSVKRT 82
Query: 179 L--PLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLR 236
+ PL SG++S +G AI+L L+++A+ +++ SV LL
Sbjct: 83 MQRPLVSGQVS--SGEAISLFILLITVAFLLVLM-----------------LSVNTILLS 123
Query: 237 WKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPL----EIFTRPLMFATAFISCFCV 292
+ + AFC + TQ P V + P+ I P+ FI+ C
Sbjct: 124 FGALAL--AFCYPFMKRY-TQLPQVVLGAAFGWAIPMAFMASINALPIQAWLLFIANICW 180
Query: 293 VIAF--IKDLHDVDGDKKFGIKTLSVMLGK 320
+A+ + + D D D K G+K+ +++ GK
Sbjct: 181 TVAYDTMYAMVDRDDDLKIGVKSTAILFGK 210
>sp|A1TJR2|UBIA_ACIAC 4-hydroxybenzoate octaprenyltransferase OS=Acidovorax citrulli
(strain AAC00-1) GN=ubiA PE=3 SV=1
Length = 295
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 32/183 (17%)
Query: 154 VLMHIYVVAINQLSDVEVDKVNK--PYLPLASGEISMGTGIAITLASALMSLAYAVMIRS 211
+LM +N ++D + D+ K P+ SG +S+ + + AL+S + +
Sbjct: 62 ILMRSAGCCVNDVADRDFDRHVKRTAQRPVTSGAVSVREALGVGAVLALVSFGLVLTTNA 121
Query: 212 PPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGR 271
A IAW A ++ P + P V + +G
Sbjct: 122 -----ATIAWSLPALAVTIAYPFAK-----------------RFVSMPQAVLGVAFSMGI 159
Query: 272 PLEIFTR-----PLMFATAFISCFCVVIAFIKD--LHDVDGDKKFGIKTLSVMLGKERVS 324
P+ FT P++ A + C V+A+ + + D D D K G+KT ++ LG+ V
Sbjct: 160 PMA-FTAVGGAVPMLAAWLVLGNLCWVLAYDTEYAMVDRDDDLKIGMKTSAITLGRHDVP 218
Query: 325 KLI 327
++
Sbjct: 219 AVM 221
>sp|A6UQV8|DGGGP_METVS Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_0977 PE=3 SV=1
Length = 278
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 149 ALVPAVLMHIYVV-------AINQLSDVEVDKVNKPYLPLASGEISM 188
AL P +L + V ++N + D+++D++NKP+ P+ S IS+
Sbjct: 36 ALFPLILAFLVVFFICGFGNSLNDIYDLKIDRINKPFRPIPSKRISL 82
>sp|P33326|BCHG_CHLAA Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=bchG PE=4 SV=2
Length = 310
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
+N +D EVD +N+P+ + SG++S+ +T + + A+ + + + +
Sbjct: 85 VNDYADREVDAINEPHRLIPSGQVSLRHVYILTAVLTWIGASIALFLGRQVAFFVALGLV 144
Query: 223 FVGTAYSVQLPLLRWKGNSFLA-AFCMVSLNGLLTQFPVYVHIQKYVLGRPL--EIFTRP 279
F AYS++ P +R K N ++ A +S GL + + PL E T
Sbjct: 145 FA-LAYSLR-P-IRGKRNGWIGNALVAISYEGL-------AWMAGHAAFAPLTGESVTIA 194
Query: 280 LMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVSKLI 327
L++ S I + D + GD GI+++ V GK ++++
Sbjct: 195 LLY-----SLGAHGIMTVNDFKSIRGDTIMGIRSIPVQYGKVMAARMV 237
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 59/187 (31%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEI-------------SMGTGIA---------ITLASA 199
AIN D+++D +N+P P+ SG + ++GT IA I L ++
Sbjct: 69 AINDYFDIKIDSINRPERPIPSGRVKAKEAFYFSYLLFALGTLIAFSINSICGSIALFNS 128
Query: 200 LMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFP 259
L+ + YA ++ P + + G+ + + + G L+ +++
Sbjct: 129 LLLILYAKTLKGTPLLGNLSIGYLTGSVFLFGASIFGFGGIKALSVLFLLA--------- 179
Query: 260 VYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLG 319
L I R + +KD+ D++GD G TL + +G
Sbjct: 180 ------------ALAITAREI----------------VKDIEDMEGDSLEGADTLPLRIG 211
Query: 320 KERVSKL 326
++ L
Sbjct: 212 AKKAGYL 218
>sp|Q6LWN2|DGGGP_METMP Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1677 PE=3 SV=1
Length = 278
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSL 203
A+N + D+++D++NKP P+ S I++ + + +M L
Sbjct: 56 ALNDIYDLKIDRINKPKRPIPSKRITLNNAKVFSYSLVVMGL 97
>sp|A8AY51|EZRA_STRGC Septation ring formation regulator EzrA OS=Streptococcus gordonii
(strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=ezrA
PE=3 SV=1
Length = 574
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/72 (19%), Positives = 33/72 (45%)
Query: 49 CSQSNSFYNLTNKIASSRNCKPFNSHRAPVTLQDGYASKSEDDDHSNSFLNVFLKKFHAL 108
+++ Y+LT + + + +TL + +DDD++ +N+++ K H +
Sbjct: 374 SAENKQAYSLTQEALEATQERLKEIEDEQITLGERLERIEKDDDNARQKVNIYINKLHTI 433
Query: 109 YRFMRAYACAGV 120
R+M G+
Sbjct: 434 KRYMEKRNLPGI 445
>sp|A5ULR8|DGGGP_METS3 Digeranylgeranylglyceryl phosphate synthase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0941
PE=3 SV=1
Length = 283
Score = 31.6 bits (70), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 29/169 (17%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTG--------IAITLASALMSLAYAVMIRSPPF 214
IN D ++D +NKP P+ SG IS+ I + L+S I
Sbjct: 51 INDYFDYKIDLINKPQRPIPSGRISLDNAKNYAYLLFILAAIVGFLISCLVDTWIPCTIV 110
Query: 215 IWA-VIAWIFVGTAYSVQ-LPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRP 272
I++ +I +++ AY ++ PL+ F+ C + Y
Sbjct: 111 IFSDIILYLY---AYKLKSTPLIGNLTVGFMTGLCFI--------------FAGYTFNEG 153
Query: 273 LEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKE 321
L I+ L+ A I I KD+ D++GD G KT ++ G +
Sbjct: 154 LIIYESYLLAFFALIMTTAREIT--KDIEDMEGDMAEGAKTFPILYGPK 200
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,124,500
Number of Sequences: 539616
Number of extensions: 4291293
Number of successful extensions: 12409
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 12316
Number of HSP's gapped (non-prelim): 92
length of query: 327
length of database: 191,569,459
effective HSP length: 118
effective length of query: 209
effective length of database: 127,894,771
effective search space: 26730007139
effective search space used: 26730007139
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)