BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020372
(327 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255559360|ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
gi|223540085|gb|EEF41662.1| RNA binding protein, putative [Ricinus communis]
Length = 436
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/328 (82%), Positives = 297/328 (90%), Gaps = 1/328 (0%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAEVS LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK
Sbjct: 109 MLPKNVSEAEVSELFSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGSSVPLVVKWADTEKERQARRAQK QSQA+NLPNADSQHPSLFGALPMGY P YNGYG
Sbjct: 169 MEGSSVPLVVKWADTEKERQARRAQKVQSQASNLPNADSQHPSLFGALPMGYVPQYNGYG 228
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMR-GASPDLSSNMGPRNYAMPPSGF 179
YQA G+YGLM YRLPP+Q+QP FH IIPPVNQGNA+R G PDL +MGPRNYA+PP+ +
Sbjct: 229 YQAPGTYGLMPYRLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASY 288
Query: 180 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
VGS YPAVPG+QYPM YPGGM+ RPL++SPG+VSP V +SN +TSS + SGGQ+EGP
Sbjct: 289 VGSAYPAVPGIQYPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGP 348
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
PG+NLFIYHIPQEFGDQEL +AFQ +G+VLSAKVFVDKATGVSKCFGFVSY+SP +AQ A
Sbjct: 349 PGSNLFIYHIPQEFGDQELASAFQPYGKVLSAKVFVDKATGVSKCFGFVSYDSPTAAQTA 408
Query: 300 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
I MMNGCQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 409 INMMNGCQLGGKKLKVQLKRDNKQSKPY 436
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E ++ A+F + + ++ I++ + + S+GC F+ ++++A A+ A + K
Sbjct: 22 VPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 82 LPGASSPLQVKYADGELER 100
>gi|225436819|ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
vinifera]
gi|296086641|emb|CBI32276.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/329 (80%), Positives = 294/329 (89%), Gaps = 2/329 (0%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAEVS+LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK
Sbjct: 109 MLPKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGY 119
MEGSSVPLVVKWADTEKERQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGY
Sbjct: 169 MEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGY 228
Query: 120 GYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGF 179
GYQA G+YGLMQYR+PPMQ+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + +
Sbjct: 229 GYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASY 288
Query: 180 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
+GS YPA+PGLQYPM Y GG++ H+PL+ SPGS PA+ SN T+S G SGGQ+EGP
Sbjct: 289 MGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGP 348
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
PGANLFIYHIPQEFGD EL +AFQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ+A
Sbjct: 349 PGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSA 408
Query: 300 IAMMNGCQLGGKKLKVQLKRD-NKQNKPY 327
I+MMNGCQLGGKKLKVQLKRD NKQNKPY
Sbjct: 409 ISMMNGCQLGGKKLKVQLKRDNNKQNKPY 437
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN++EA++ A+F + + ++ I++ + + S+GC F+ ++++A A+ A + K
Sbjct: 22 VPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNACHNKRT 81
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 82 LPGASSPLQVKYADGELER 100
>gi|359479768|ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
vinifera]
Length = 447
Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/329 (80%), Positives = 294/329 (89%), Gaps = 2/329 (0%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAEVS+LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK
Sbjct: 119 MLPKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 178
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGY 119
MEGSSVPLVVKWADTEKERQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGY
Sbjct: 179 MEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGY 238
Query: 120 GYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGF 179
GYQA G+YGLMQYR+PPMQ+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + +
Sbjct: 239 GYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASY 298
Query: 180 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
+GS YPA+PGLQYPM Y GG++ H+PL+ SPGS PA+ SN T+S G SGGQ+EGP
Sbjct: 299 MGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGP 358
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
PGANLFIYHIPQEFGD EL +AFQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ+A
Sbjct: 359 PGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSA 418
Query: 300 IAMMNGCQLGGKKLKVQLKRD-NKQNKPY 327
I+MMNGCQLGGKKLKVQLKRD NKQNKPY
Sbjct: 419 ISMMNGCQLGGKKLKVQLKRDNNKQNKPY 447
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN++EA++ A+F + + ++ I++ + + S+GC F+ ++++A A+ A + K
Sbjct: 22 VPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNACHNKRT 81
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 82 LPGASSPLQVKYADGELER 100
>gi|224128620|ref|XP_002320377.1| predicted protein [Populus trichocarpa]
gi|222861150|gb|EEE98692.1| predicted protein [Populus trichocarpa]
Length = 432
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/327 (81%), Positives = 287/327 (87%), Gaps = 5/327 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAEVS LFS YGTIKDLQILRGSQQTSK CAFLKYETKEQALAALE INGKHK
Sbjct: 110 MLPKNVSEAEVSDLFSKYGTIKDLQILRGSQQTSKSCAFLKYETKEQALAALEDINGKHK 169
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGSSVPLVVKWADTEKERQARRAQKAQSQA +PN DSQHPSLFGALPMGYAPPYNGYG
Sbjct: 170 MEGSSVPLVVKWADTEKERQARRAQKAQSQA--MPNTDSQHPSLFGALPMGYAPPYNGYG 227
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRG-ASPDLSSNMGPRNYAMPPSGF 179
YQA G YGLM YRLPPMQNQP FH ++PPVNQGN +RG PDLS N+ PRNYA P+ +
Sbjct: 228 YQAPGVYGLMPYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA--PATY 285
Query: 180 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
+GS YP V GLQYP+ YPG M+ HRPL++SPG++SP V +SN +T S G SG Q+EGP
Sbjct: 286 MGSAYPTVTGLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQVEGP 345
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
PGANLFIYHIPQEFGDQEL NAF+AFG+VLSAKVFVDK TGVSKCFGFVSY+SPA+AQNA
Sbjct: 346 PGANLFIYHIPQEFGDQELANAFEAFGKVLSAKVFVDKVTGVSKCFGFVSYDSPAAAQNA 405
Query: 300 IAMMNGCQLGGKKLKVQLKRDNKQNKP 326
I MMNG QLGGKKLKVQLKRDNKQ+KP
Sbjct: 406 ITMMNGFQLGGKKLKVQLKRDNKQSKP 432
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN++EAE+ A+F + + ++ I++ + + S+GC FL ++++A A+ A + K
Sbjct: 23 VPKNMTEAELLAMFKDFALVDEVNIIKDKTTRASRGCCFLICPSRQEADKAVNACHNKKT 82
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 83 LPGASSPLQVKYADGELER 101
>gi|356505495|ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 431
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/327 (79%), Positives = 285/327 (87%), Gaps = 4/327 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSE E+SALFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQAL ALEAINGKHK
Sbjct: 109 MLPKNVSEVEISALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALTALEAINGKHK 168
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGSSVPLVVKWADTEKERQARRAQKAQSQA+N+P+ DSQHPSLFGALPM Y PPYNGYG
Sbjct: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQASNVPHTDSQHPSLFGALPMSYVPPYNGYG 228
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
YQA YGLM YR+PPMQ+Q G+H ++P +NQGNA+R PDL NM PRNY +PP+ +V
Sbjct: 229 YQAPVGYGLMPYRMPPMQSQHGYHNMMPHMNQGNALR---PDLGPNMNPRNYHVPPASYV 285
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 240
GS YPAVPGLQ+PM YP GM+ RP+N SPGSVSPA N+N + SS SGGQ EGPP
Sbjct: 286 GS-YPAVPGLQHPMAYPTGMISPRPMNTSPGSVSPASGNNNHAASSGASKNSGGQAEGPP 344
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
GANLFIYHIPQEFGDQEL AFQ FGRVLSAKVFVDKATGVSKCFGFVSY++P +AQ+AI
Sbjct: 345 GANLFIYHIPQEFGDQELATAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAI 404
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+MMNGCQLGGKKLKVQLKRDNKQ KPY
Sbjct: 405 SMMNGCQLGGKKLKVQLKRDNKQGKPY 431
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E E+ A+F + + ++ I++ + + S+GC F+ ++E+A A+ A + K
Sbjct: 22 VPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVNACHNKRT 81
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 82 LPGASSPLQVKYADGELER 100
>gi|356572661|ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
Length = 429
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/327 (78%), Positives = 283/327 (86%), Gaps = 4/327 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSE E+SALFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK
Sbjct: 107 MLPKNVSEVEISALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 166
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
ME SSVPLVVKWADTEKERQARRAQKAQSQA+N+P+ DSQH S+FGALPM Y PPYNGY
Sbjct: 167 MEDSSVPLVVKWADTEKERQARRAQKAQSQASNVPHTDSQHLSMFGALPMSYVPPYNGYA 226
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
YQA G YGLM YR+PPMQ+Q G+H ++P +NQ NA+R PDL NM PRNY +PP+ +V
Sbjct: 227 YQAPGGYGLMPYRMPPMQSQHGYHNVMPHMNQVNALR---PDLGPNMNPRNYHVPPASYV 283
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 240
S YPAVPGLQ+PM YP GM+ RP+N SPGSVSPA N++ + SS SGGQ+EGPP
Sbjct: 284 -SSYPAVPGLQHPMAYPTGMISPRPMNTSPGSVSPAGGNNSSAASSGASKNSGGQVEGPP 342
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
GANLFIYHIPQEFGDQEL AFQ FGRVLSAKVFVDKATGVSKCFGFVSY++P +AQ+AI
Sbjct: 343 GANLFIYHIPQEFGDQELATAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAI 402
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+MMNGCQLGGKKLKVQLKRDNKQ KPY
Sbjct: 403 SMMNGCQLGGKKLKVQLKRDNKQGKPY 429
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E E+ A+F + + ++ I++ + + S+GC FL ++E+A A+ A + K
Sbjct: 20 VPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFLICPSREEADKAVNACHNKKT 79
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 80 LPGASSPLQVKYADGELER 98
>gi|449462310|ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
Length = 438
Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust.
Identities = 254/327 (77%), Positives = 279/327 (85%), Gaps = 4/327 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSE EVS LFS YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGK K
Sbjct: 116 MLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCK 175
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGSSVPLVVKWADTEKERQAR+AQKAQSQA N+ NADSQHPSLFGA+P+GY PPYNGYG
Sbjct: 176 MEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYG 235
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
YQA GSYGLMQY LPPMQNQ GF +IP +NQGNAMRG PDL M RNYAMPP+ +
Sbjct: 236 YQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY- 294
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 240
S YP VP LQ+PM YPGGM+ +++SPG P N S +SS G GSGGQIEGPP
Sbjct: 295 -SAYPGVPALQHPMAYPGGMMSPGVVSSSPGP-GPFTGGKN-SPTSSMGKGSGGQIEGPP 351
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
GANLFIYHIPQEFGD+EL N+F+AFGRVLSAKVFVDK +GVSKCFGFVSY+S +AQ+AI
Sbjct: 352 GANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAI 411
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+ MNGCQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 412 STMNGCQLGGKKLKVQLKRDNKQSKPY 438
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E ++ +F + + ++ I+R + + S+GC F+ ++++A A+ A + K
Sbjct: 29 VPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 88
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 89 LPGASSPLQVKYADGELER 107
>gi|356500250|ref|XP_003518946.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 426
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/327 (75%), Positives = 272/327 (83%), Gaps = 9/327 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKN+SE EVS LFS YGTIKDLQILRGSQ TSKGCAFLKYETKEQA ALEAINGKH
Sbjct: 109 MLPKNISEDEVSNLFSKYGTIKDLQILRGSQHTSKGCAFLKYETKEQAFTALEAINGKHT 168
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGSSVPLVVKWADTEKER ARRAQK QS+ +N P+AD QHPSLFGALPMGY PPYNGYG
Sbjct: 169 MEGSSVPLVVKWADTEKERLARRAQKTQSRVSNAPHADPQHPSLFGALPMGYVPPYNGYG 228
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
YQA G YGLM YR PP+QNQPGFH + NQ NA+R PDL +M PRNY PP+ ++
Sbjct: 229 YQAPGGYGLMPYRFPPVQNQPGFHNM----NQANAVR---PDLGHSMNPRNYPAPPASYI 281
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 240
GS YPAVPG+Q+PM YP G++ RP+++ PGSVSPA NSN S+SS S GQIEGPP
Sbjct: 282 GS-YPAVPGIQHPMVYPRGIVSPRPMSSCPGSVSPAGGNSN-SSSSGASKSSSGQIEGPP 339
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
GANLFIYHIPQE+GDQEL AFQ FGRVLSAK+FVDK TGVSKCFGFVSY++P +AQ AI
Sbjct: 340 GANLFIYHIPQEYGDQELTTAFQPFGRVLSAKIFVDKVTGVSKCFGFVSYDTPEAAQAAI 399
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+ MNGCQLGGKKLKVQLKRDNKQ+K Y
Sbjct: 400 STMNGCQLGGKKLKVQLKRDNKQSKIY 426
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK +SE EV A+F + ++ I+R + + S+GC F+ ++E+A A+ A + K
Sbjct: 22 VPKRMSEDEVLAMFKELALVDEVNIIRDKATRASRGCCFVICPSREEADKAVNACHNKKT 81
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 82 LPGASSPLQVKYADGELER 100
>gi|147772817|emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
Length = 450
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/288 (78%), Positives = 253/288 (87%), Gaps = 1/288 (0%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAEVS+LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK
Sbjct: 163 MLPKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 222
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGY 119
MEGSSVPLVVKWADTEKERQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGY
Sbjct: 223 MEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGY 282
Query: 120 GYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGF 179
GYQA G+YGLMQYR+PPMQ+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + +
Sbjct: 283 GYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASY 342
Query: 180 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
+GS YPA+PGLQYPM Y GG++ H+PL+ SPGS PA+ SN T+S G SGGQ+EGP
Sbjct: 343 MGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGP 402
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 287
PGANLFIYHIPQEFGD EL +AFQ FGRVLSAKVFVDKATG SKCFG
Sbjct: 403 PGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGI 450
>gi|356535559|ref|XP_003536312.1| PREDICTED: CUGBP Elav-like family member 1-B-like [Glycine max]
Length = 429
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/327 (75%), Positives = 276/327 (84%), Gaps = 7/327 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKN+SE EVS LFS+YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKH
Sbjct: 110 MLPKNISEDEVSDLFSMYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHT 169
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGSSVPLVVKWADTEKER ARRAQKAQSQ +N+P AD QHPSLFGALPMGY PPYNGYG
Sbjct: 170 MEGSSVPLVVKWADTEKERLARRAQKAQSQVSNMPQADPQHPSLFGALPMGYVPPYNGYG 229
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
YQA G YGLM YR PPMQNQPGFH + +NQ NA+R PDL ++ PRNY PP+ ++
Sbjct: 230 YQAPGGYGLMAYRFPPMQNQPGFHNM--NMNQVNAVR---PDLGHSVNPRNYHAPPASYI 284
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 240
G YPAVPG+Q+PM YP ++ RP+++S GSVSPA NSN S+SS S GQIEGPP
Sbjct: 285 GP-YPAVPGVQHPMVYPRRIVSPRPMSSSSGSVSPAGGNSN-SSSSGASKSSSGQIEGPP 342
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
GANLFIYHIPQE+GD+EL FQ FGRVLSAK+FVDK TGVSKCFGFVSY++P +AQ+AI
Sbjct: 343 GANLFIYHIPQEYGDEELATTFQPFGRVLSAKIFVDKVTGVSKCFGFVSYDTPEAAQSAI 402
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+ MNGCQLGGKKLKVQLKRDNKQ+K Y
Sbjct: 403 STMNGCQLGGKKLKVQLKRDNKQSKIY 429
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK ++E EV A+F + + ++ I+R + + S+GC F+ ++E+A A+ A + K
Sbjct: 23 VPKRMAEDEVLAMFKEFALVDEVNIIRDKASRASRGCCFVICPSREEADKAVNACHNKKT 82
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 83 LPGASSPLQVKYADGELER 101
>gi|224068763|ref|XP_002302819.1| predicted protein [Populus trichocarpa]
gi|222844545|gb|EEE82092.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/327 (72%), Positives = 257/327 (78%), Gaps = 43/327 (13%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAE+S LFS YG IKDLQILRGSQQTSKGCAFLKYETKEQA AALE INGKHK
Sbjct: 113 MLPKNVSEAELSDLFSKYGIIKDLQILRGSQQTSKGCAFLKYETKEQAHAALEDINGKHK 172
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGSSVPLVVKWADTEKERQARRAQKAQSQA +PN DSQHPSLFGALPMGYAPPYNGYG
Sbjct: 173 MEGSSVPLVVKWADTEKERQARRAQKAQSQA--MPNTDSQHPSLFGALPMGYAPPYNGYG 230
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
YQA G+Y L+ YRL G PDLS N+ PRNYA P+G++
Sbjct: 231 YQAPGAYELVPYRL---------------------RGGIRPDLSLNISPRNYA--PAGYM 267
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 240
GS YP +PGLQYP+ YPG ++ HRPL+NSPG++SP V PS PP
Sbjct: 268 GSAYPTMPGLQYPIAYPGAIMSHRPLSNSPGTLSPTV----PSC--------------PP 309
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
GANLFIYHIPQEFGDQEL N FQAFG+VLSAKVFVDKAT VSKCFGFVSY+SPA+AQNAI
Sbjct: 310 GANLFIYHIPQEFGDQELANTFQAFGQVLSAKVFVDKATCVSKCFGFVSYDSPAAAQNAI 369
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
MMNGCQLGGK LKVQLK+DNKQ+KPY
Sbjct: 370 TMMNGCQLGGKMLKVQLKKDNKQSKPY 396
>gi|115442121|ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|20160777|dbj|BAB89718.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|20161317|dbj|BAB90241.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113534871|dbj|BAF07254.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|215704529|dbj|BAG94162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189701|gb|EEC72128.1| hypothetical protein OsI_05123 [Oryza sativa Indica Group]
gi|222619840|gb|EEE55972.1| hypothetical protein OsJ_04706 [Oryza sativa Japonica Group]
Length = 460
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/331 (68%), Positives = 267/331 (80%), Gaps = 8/331 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++ E++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKH
Sbjct: 134 MLPKNVTDTELTDLFSKYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKH 193
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD-SQHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ Q++N+P+A Q SLFGAL MGY P YNG
Sbjct: 194 KIEGSSVPLVVKWADTEKERQARKAQKAQLQSSNMPSASPMQQSSLFGALQMGYMPQYNG 253
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPS 177
+GYQ G+YGLMQY L PMQNQ F ++ PVNQGN++RG +P+LS N PR++ AM
Sbjct: 254 FGYQPPGTYGLMQYPLSPMQNQATFPNMVQPVNQGNSIRGVNPELSPNSVPRSFNAMQ-- 311
Query: 178 GFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIE 237
+ S YP VPG+QY YPGG++ +RP NS S+ + N+N SSS + GGQIE
Sbjct: 312 --LSSPYPPVPGVQYAGSYPGGLMNNRPFGNSFSSIKVPIVNANSPASSSPSSNPGGQIE 369
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLFIYHIPQ++GDQ+L NAFQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ
Sbjct: 370 GPPGANLFIYHIPQDYGDQDLSNAFQRFGRVLSAKVFVDKATGSSKCFGFVSYDSPASAQ 429
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 327
AI +MNG QLG KKLKVQLKRDN K +KP+
Sbjct: 430 AAIGVMNGFQLGSKKLKVQLKRDNSKHSKPF 460
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++EAE+ A+F + ++ +++ + + S+GC FL ++E+A A+ A + KH
Sbjct: 47 VPKHMTEAELLAMFQEVAIVDEVTVIKDKATKASRGCCFLICPSREEADKAVNAYHNKHT 106
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 107 LPGASSPLQVKYADGELER 125
>gi|326528321|dbj|BAJ93342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/330 (70%), Positives = 267/330 (80%), Gaps = 6/330 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++ E++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKH
Sbjct: 141 MLPKNVTDVEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKH 200
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ NA++ Q SLFGAL MGY PPYNG
Sbjct: 201 KIEGSSVPLVVKWADTEKERQARKAQKAQYPPSNMSNANAMQQSSLFGALQMGYVPPYNG 260
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 178
+GYQ G+YGLMQY L PMQNQ GF ++ PVNQG+++RG S +LS N R++ S
Sbjct: 261 FGYQPQGTYGLMQYPLSPMQNQAGFQNMVQPVNQGSSIRGVSSELSPNSVARSFN---SM 317
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
+GS YPA PG+QYP YPGG + RP NS SV AN+ TSSS G+ +G Q+EG
Sbjct: 318 QLGSPYPAGPGMQYPGSYPGGGINSRPYMNSHNSVKVPNANATSPTSSSTGSNTGPQLEG 377
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
PPGANLFIYHIPQEFGDQ+L +AFQ+FGRVLSAKVFVDKATG SKCFGFVSY+SPA AQ
Sbjct: 378 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 437
Query: 299 AIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 327
AI+MMNG QLGGKKLKVQLKRDN K NK Y
Sbjct: 438 AISMMNGFQLGGKKLKVQLKRDNSKHNKLY 467
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK ++EAE++A+F + ++ ++R + + S+GC FL ++E+A A+ A + K
Sbjct: 54 VPKLMTEAELAAMFRDVAIVDEVTVIRDKATKASRGCCFLICPSREEADKAVNAYHNKRT 113
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+ PL VK+AD E ER
Sbjct: 114 LPGAPSPLQVKYADGELER 132
>gi|357129324|ref|XP_003566314.1| PREDICTED: CUGBP Elav-like family member 2-like [Brachypodium
distachyon]
Length = 459
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/330 (69%), Positives = 262/330 (79%), Gaps = 6/330 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKH
Sbjct: 133 MLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAMAAIEALNGKH 192
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKA Q +N+ NA + Q SLFGAL MGY P YNG
Sbjct: 193 KIEGSSVPLVVKWADTEKERQARKAQKAHFQPSNMSNATAMQQNSLFGALQMGYMPQYNG 252
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 178
+GYQ G+YGLMQY L PMQNQ F ++ PVNQG+++RG + +LS N R++ S
Sbjct: 253 FGYQPQGTYGLMQYPLSPMQNQAAFQNMVQPVNQGSSIRGVNSELSPNSVTRSFN---SM 309
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
+GS YPA PG+QYP YPGG + RP NS ++ N+ TSSS + G QIEG
Sbjct: 310 QLGSPYPAAPGMQYPGSYPGGAINSRPYMNSHNAIKVPNTNATSPTSSSTSSNPGPQIEG 369
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
PPGANLFIYHIPQEFGDQ+L NAFQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ
Sbjct: 370 PPGANLFIYHIPQEFGDQDLANAFQNFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQA 429
Query: 299 AIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 327
AI+MMNG QLGGKKLKVQLKRDN K NK Y
Sbjct: 430 AISMMNGFQLGGKKLKVQLKRDNSKHNKLY 459
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK ++EAE++A+F + ++ ++R + + S+GC FL ++E+A A+ A + K
Sbjct: 46 VPKQMTEAELAAMFRDVAIVDEVTVIRDKATKVSRGCCFLICPSREEADKAVNAYHNKRT 105
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+ PL VK+AD E ER
Sbjct: 106 LPGAPSPLQVKYADGELER 124
>gi|226492020|ref|NP_001152526.1| LOC100286166 [Zea mays]
gi|195657131|gb|ACG48033.1| RNA binding protein [Zea mays]
Length = 463
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 268/325 (82%), Gaps = 8/325 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++ E++ LFS YG + DLQILRGSQQT+K GCAF+KY+TK+QALAA+EA+NGKH
Sbjct: 134 MLPKNVTDTELTDLFSKYGNVTDLQILRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKH 193
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD--SQHPSLFGALPMGYAPPYN 117
K+EGSSVPLVVKWADTEKERQAR+AQKAQSQ +++PNA QH S+FGAL MGY P YN
Sbjct: 194 KIEGSSVPLVVKWADTEKERQARKAQKAQSQLSHIPNASPMQQHSSVFGALQMGYMPQYN 253
Query: 118 GYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPP 176
G+GYQ +G+YGLMQY L PMQNQ F ++ P+NQGN++RG +P++S + R++ AM
Sbjct: 254 GFGYQPTGTYGLMQYPLSPMQNQGPFQNMVQPLNQGNSIRGVNPEVSPSSVQRSFNAMQ- 312
Query: 177 SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQI 236
+GS YPA+PG+QYP YPGG +G+R L NS + +N+N + SSS + +GGQ+
Sbjct: 313 ---LGSPYPAMPGMQYPGSYPGGPMGNRHLGNSHNPIKVPNSNANSTVSSSPSSNAGGQV 369
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGPPGANLFIYHIPQE+GDQEL +AFQ+FGRV+SAKVFVDKATGVSKCFGFVSY+SPASA
Sbjct: 370 EGPPGANLFIYHIPQEYGDQELSSAFQSFGRVVSAKVFVDKATGVSKCFGFVSYDSPASA 429
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDN 321
Q AI MNG QLGGKKLKVQLKR+N
Sbjct: 430 QAAINRMNGYQLGGKKLKVQLKREN 454
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++EA++ ALF + ++ +++ + + S+GC F+ ++E+A A+ A + K
Sbjct: 37 VPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVNAYHNKQT 96
Query: 61 MEG----------SSVPLVVKWADTEKER 79
+ G +S PL VK+AD E ER
Sbjct: 97 LSGVCEHTTNLVLASSPLQVKYADGELER 125
>gi|413951358|gb|AFW84007.1| hypothetical protein ZEAMMB73_397161 [Zea mays]
Length = 455
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 267/325 (82%), Gaps = 8/325 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++ E++ LFS YG + DLQILRGSQQT+K GCAF+KY+TK+QALAA+EA+NGKH
Sbjct: 126 MLPKNVTDTELTDLFSKYGNVTDLQILRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKH 185
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD--SQHPSLFGALPMGYAPPYN 117
K+EGSSVPLVVKWADTEKERQAR+AQKAQSQ +++PNA QH S+FGAL MGY P YN
Sbjct: 186 KIEGSSVPLVVKWADTEKERQARKAQKAQSQLSHIPNASPMQQHSSVFGALQMGYMPQYN 245
Query: 118 GYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPP 176
G+GYQ G+YGLMQY L PMQNQ F ++ P+NQGN++RG +P++S + R++ AM
Sbjct: 246 GFGYQPPGTYGLMQYPLSPMQNQGPFQNMVQPLNQGNSIRGVNPEVSPSSVQRSFNAMQ- 304
Query: 177 SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQI 236
+GS YPA+PG+QYP YPGG +G+R L NS + +N+N + SSS + +GGQ+
Sbjct: 305 ---LGSPYPAMPGMQYPGSYPGGPMGNRHLGNSHNPIKAPNSNANSTVSSSPSSNAGGQV 361
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGPPGANLFIYHIPQE+GDQEL +AFQ+FGRV+SAKVFVDKATGVSKCFGFVSY+SPASA
Sbjct: 362 EGPPGANLFIYHIPQEYGDQELSSAFQSFGRVVSAKVFVDKATGVSKCFGFVSYDSPASA 421
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDN 321
Q AI MNG QLGGKKLKVQLKR+N
Sbjct: 422 QAAINRMNGYQLGGKKLKVQLKREN 446
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++EA++ ALF + ++ +++ + + S+GC F+ ++E+A A+ A + K
Sbjct: 39 VPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVNAYHNKQT 98
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 99 LSGASSPLQVKYADGELER 117
>gi|242087741|ref|XP_002439703.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
gi|241944988|gb|EES18133.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
Length = 455
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/331 (68%), Positives = 267/331 (80%), Gaps = 8/331 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG H
Sbjct: 129 MLPKNVTDAEMTDLFSKYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTH 188
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ Q++N+ N ++ Q S+FGAL MGY P YNG
Sbjct: 189 KIEGSSVPLVVKWADTEKERQARKAQKAQFQSSNMLNPNAMQQNSVFGALQMGYVPQYNG 248
Query: 119 YGYQASGSYGLMQYR-LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPS 177
+GYQ G+YGLMQY L P+QNQ F ++ PVNQG+++RGA+ +LS N PR++ S
Sbjct: 249 FGYQPQGTYGLMQYPPLSPVQNQTAFQNMVQPVNQGSSIRGANSELSPNSVPRSFN---S 305
Query: 178 GFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIE 237
+GS Y +PGLQYP YPGG + HRP +NS S + ++ S SSS + G QIE
Sbjct: 306 AQLGSPYSPLPGLQYPGVYPGGPINHRPFSNSHSS-TKVQNSNANSPSSSPSSNPGPQIE 364
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLFIYHIPQEFGD +L NAF +FGRVLSAKVFVDKATGVSKCFGFVSY+SPASAQ
Sbjct: 365 GPPGANLFIYHIPQEFGDHDLANAFHSFGRVLSAKVFVDKATGVSKCFGFVSYDSPASAQ 424
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 327
AI++MNG QLGGKKLKVQLKRDN K NKP+
Sbjct: 425 AAISVMNGYQLGGKKLKVQLKRDNSKHNKPF 455
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK +SEAE++ALF + ++ ++R + + S+GC F+ ++E+A A+ A + K
Sbjct: 42 VPKQMSEAELAALFRGVALVDEVTVIRDRATRVSRGCCFVICPSREEADKAVTAYHNKRT 101
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 102 LPGASSPLQVKYADGELER 120
>gi|297604406|ref|NP_001055367.2| Os05g0373400 [Oryza sativa Japonica Group]
gi|215707181|dbj|BAG93641.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676313|dbj|BAF17281.2| Os05g0373400 [Oryza sativa Japonica Group]
Length = 466
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/330 (68%), Positives = 261/330 (79%), Gaps = 6/330 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKH
Sbjct: 140 MLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKH 199
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNG
Sbjct: 200 KIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNG 259
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 178
YGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS N PR++ S
Sbjct: 260 YGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SM 316
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
+GS Y VP +QYP YPG + RP NS S+ AN++ TSSS + G QIEG
Sbjct: 317 QLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSMKVPNANASSPTSSSTSSNPGPQIEG 376
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
PPGANLFIYHIPQEFGDQ+L AFQ FGRVLSAKVFVDKATG+SKCFGF+SY+SPASAQ
Sbjct: 377 PPGANLFIYHIPQEFGDQDLAGAFQGFGRVLSAKVFVDKATGLSKCFGFISYDSPASAQT 436
Query: 299 AIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 327
AI+MMNG QLGGKKLKVQLKRDN K +K Y
Sbjct: 437 AISMMNGYQLGGKKLKVQLKRDNSKHSKTY 466
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK ++E E++A+F+ + ++ ++R + + S+GC FL ++E+A A+ A + K
Sbjct: 53 VPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADKAVNAYHNKRT 112
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 113 LPGASSPLQVKYADGELER 131
>gi|297809825|ref|XP_002872796.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
gi|297318633|gb|EFH49055.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/326 (69%), Positives = 261/326 (80%), Gaps = 8/326 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAEV +LFS YGTIKDLQILRG+QQTSKGCAFLKYETKEQA++A+E+INGKHK
Sbjct: 112 MLPKNVSEAEVQSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHK 171
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGS+VPLVVKWADTE+ER RR QKAQS L NAD +PSLFGALPMGY PPYNGYG
Sbjct: 172 MEGSTVPLVVKWADTERERHTRRLQKAQSHIARLSNADPTNPSLFGALPMGYVPPYNGYG 231
Query: 121 Y-QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPP 176
Y Q G+YG Y LPP+QNQ F +I NQG NA++G SPD + + RN+ MPP
Sbjct: 232 YHQPPGTYG---YMLPPIQNQAAFPNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPP 288
Query: 177 SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSG-GTGSGGQ 235
+ ++GSGYPAV G +P YP G++ RPL++SPGS+SP +ANS ST+ G G S Q
Sbjct: 289 ANYMGSGYPAVRGHPFPFAYPRGIVSPRPLSSSPGSISPGIANSGMSTTPLGIGLSSVVQ 348
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
EGP GANLFIY+IP+EFGDQEL AFQ+FG VLSAKVFVDKATGVSKCFGFVSY+S A+
Sbjct: 349 TEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAA 408
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDN 321
AQNAI +MNG LGGKKLKVQLKRDN
Sbjct: 409 AQNAIDVMNGRHLGGKKLKVQLKRDN 434
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++SE+++ LF + + ++ I++ + S+GC FL ++E+A + A + K
Sbjct: 25 IPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVNACHNKKT 84
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S L VK+AD E ER
Sbjct: 85 LPGASSLLQVKYADGELER 103
>gi|413944942|gb|AFW77591.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 456
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/331 (67%), Positives = 265/331 (80%), Gaps = 8/331 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV+ AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG H
Sbjct: 130 MLPKNVTHAEMTDLFSKYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTH 189
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ Q++N+ NA++ Q S+FG L MGY P YNG
Sbjct: 190 KIEGSSVPLVVKWADTEKERQARKAQKAQFQSSNMLNANAMQQNSVFGGLQMGYVPQYNG 249
Query: 119 YGYQASGSYGLMQYR-LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPS 177
+GYQ G+YGLMQY L P+QNQ F ++ PVNQG+++ GA+ ++S N PR++ S
Sbjct: 250 FGYQPQGTYGLMQYPPLSPVQNQAAFQNMVQPVNQGSSIHGANSEVSPNPVPRSFN---S 306
Query: 178 GFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIE 237
+GS Y +PGLQYP YPGG + HRP ++S S + +S S SSS + G QIE
Sbjct: 307 AQLGSPYSPLPGLQYPGVYPGGPINHRPFSSSHSS-TKVQNSSANSPSSSPSSNPGPQIE 365
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLFIYHIPQEFGD +L +AF +FGRVLSAKVFVDKATGVSKCFGFVSY+SPASAQ
Sbjct: 366 GPPGANLFIYHIPQEFGDHDLASAFHSFGRVLSAKVFVDKATGVSKCFGFVSYDSPASAQ 425
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 327
AI++MNG QLGGKKLKVQLKRDN K +KP+
Sbjct: 426 AAISVMNGYQLGGKKLKVQLKRDNSKHSKPF 456
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK +SEAE++A+F + ++ ++R + S+GC F+ ++E+A A+ + K
Sbjct: 43 VPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEADKAVTTYHNKRT 102
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 103 LPGASSPLQVKYADGELER 121
>gi|326489549|dbj|BAK01755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 253/332 (76%), Gaps = 8/332 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++ E++ LFS YG IKDLQILRGSQQTSK GCAF+KYE KEQA+AA+E +NGKH
Sbjct: 125 MLPKNVADTELTDLFSKYGNIKDLQILRGSQQTSKAGCAFIKYEMKEQAVAAIEDLNGKH 184
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ Q+ N+PN S+FGAL MGY P YNG
Sbjct: 185 KIEGSSVPLVVKWADTEKERQARKAQKAQLQSPNMPNGRPMPQSSVFGALQMGYMPQYNG 244
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 178
+ YQ G+YGLMQY L PMQNQ F + PVNQGN++RG +P+LS N GPR++
Sbjct: 245 FSYQPPGTYGLMQYPLSPMQNQGPFQNMGQPVNQGNSIRGVNPELSPNSGPRSFN---PM 301
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG-GQIE 237
+GS YPAVPG+QY YPGG + RP N + N N S G G Q E
Sbjct: 302 HLGSPYPAVPGMQYQGSYPGGPMNSRPFGNPHNPLKVPGVNVNSVAFSPRSNGGGQTQTE 361
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLFIYHIPQEFGDQEL +AFQ FGRV+SAKVFVDKATG SKCFGFVSY++P SAQ
Sbjct: 362 GPPGANLFIYHIPQEFGDQELSDAFQRFGRVISAKVFVDKATGSSKCFGFVSYDNPVSAQ 421
Query: 298 NAIAMMNGCQLGGKKLKVQLKRD--NKQNKPY 327
+AIAMMNG QLGGKKLKVQLKRD NK +KP+
Sbjct: 422 SAIAMMNGFQLGGKKLKVQLKRDNNNKHSKPF 453
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++EAE++A+F + ++ +++ + + S+GC F+ ++++A A+ A + KH
Sbjct: 38 VPKHMTEAELAAMFKDVAVVDEVTLIKDKATKASRGCCFVICPSRDEADKAVNAYHNKHT 97
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G++ PL VK+AD E ER
Sbjct: 98 LPGAASPLQVKYADGELER 116
>gi|357126724|ref|XP_003565037.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Brachypodium distachyon]
Length = 459
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/334 (67%), Positives = 258/334 (77%), Gaps = 13/334 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV + E++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKH
Sbjct: 132 MLPKNVEDTELTDLFSEYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKH 191
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAP-PYN 117
K+EGSSVPLVVKWADTEKERQAR+AQKAQ + N+PN S+FGAL MGY P YN
Sbjct: 192 KIEGSSVPLVVKWADTEKERQARKAQKAQLPSPNMPNGGPMPQSSVFGALQMGYLPHQYN 251
Query: 118 GYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPP 176
G+ YQ G+YGLMQY L PMQNQ F ++ P NQGN++RG +P+LS N R++ AM
Sbjct: 252 GFSYQPPGTYGLMQYPLSPMQNQAAFQNMVQP-NQGNSIRGVNPELSPNAVSRSFNAM-- 308
Query: 177 SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNS--PGSVSPAVANSNPSTSSSGGTGSGG 234
+GS YP VPG+QY YPGG + +RP NS P V A NS + SS G G
Sbjct: 309 --HLGSPYPGVPGMQYTGSYPGGPMSNRPFGNSHNPLKVPSANVNSIAYSPSSNGGGQT- 365
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGPPGANLFIYHIPQEFGDQEL +AFQ FGRV+SAKVFVDKATG SKCFGFVSY+SPA
Sbjct: 366 QTEGPPGANLFIYHIPQEFGDQELSDAFQRFGRVVSAKVFVDKATGASKCFGFVSYDSPA 425
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 327
SAQ+AI MMNG QLGGKKLKVQLKRDN K +KP+
Sbjct: 426 SAQSAIGMMNGFQLGGKKLKVQLKRDNSKHSKPF 459
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E E+ A+F + ++ +++ + + S+GC FL ++++A A+ A + KH
Sbjct: 36 VPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINAYHNKHT 95
Query: 61 MEG---------SSVPLVVKWADTEKER 79
+ G +S PL VK+AD E ER
Sbjct: 96 LPGVCEHSSLVLASSPLQVKYADGELER 123
>gi|357126722|ref|XP_003565036.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Brachypodium distachyon]
Length = 450
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/334 (67%), Positives = 258/334 (77%), Gaps = 13/334 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV + E++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKH
Sbjct: 123 MLPKNVEDTELTDLFSEYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKH 182
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAP-PYN 117
K+EGSSVPLVVKWADTEKERQAR+AQKAQ + N+PN S+FGAL MGY P YN
Sbjct: 183 KIEGSSVPLVVKWADTEKERQARKAQKAQLPSPNMPNGGPMPQSSVFGALQMGYLPHQYN 242
Query: 118 GYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPP 176
G+ YQ G+YGLMQY L PMQNQ F ++ P NQGN++RG +P+LS N R++ AM
Sbjct: 243 GFSYQPPGTYGLMQYPLSPMQNQAAFQNMVQP-NQGNSIRGVNPELSPNAVSRSFNAM-- 299
Query: 177 SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNS--PGSVSPAVANSNPSTSSSGGTGSGG 234
+GS YP VPG+QY YPGG + +RP NS P V A NS + SS G G
Sbjct: 300 --HLGSPYPGVPGMQYTGSYPGGPMSNRPFGNSHNPLKVPSANVNSIAYSPSSNGGGQT- 356
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGPPGANLFIYHIPQEFGDQEL +AFQ FGRV+SAKVFVDKATG SKCFGFVSY+SPA
Sbjct: 357 QTEGPPGANLFIYHIPQEFGDQELSDAFQRFGRVVSAKVFVDKATGASKCFGFVSYDSPA 416
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 327
SAQ+AI MMNG QLGGKKLKVQLKRDN K +KP+
Sbjct: 417 SAQSAIGMMNGFQLGGKKLKVQLKRDNSKHSKPF 450
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E E+ A+F + ++ +++ + + S+GC FL ++++A A+ A + KH
Sbjct: 36 VPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINAYHNKHT 95
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 96 LPGASSPLQVKYADGELER 114
>gi|3924594|gb|AAC79095.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|4262139|gb|AAD14439.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|7270181|emb|CAB77796.1| putative ribonucleoprotein [Arabidopsis thaliana]
Length = 492
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/330 (67%), Positives = 256/330 (77%), Gaps = 12/330 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAEV +LFS YGTIKDLQILRG+QQTSKGCAFLKYETKEQA++A+E+INGKHK
Sbjct: 112 MLPKNVSEAEVQSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHK 171
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGS+VPLVVKWADTE+ER RR QKAQS L N D +PSLFGALPMGY PPYNGYG
Sbjct: 172 MEGSTVPLVVKWADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYG 231
Query: 121 Y-QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPP 176
Y Q G+YG Y LPP+QNQ F +I NQG NA++G SPD + + RN+ MPP
Sbjct: 232 YHQPPGTYG---YMLPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPP 288
Query: 177 SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQI 236
++GSGYPA+ G +P YP G++ RPL++SPGS+SP + ST G S Q
Sbjct: 289 GNYMGSGYPAMRGHPFPFAYPRGIVSPRPLSSSPGSISPGM-----STPLGIGLSSVVQT 343
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP GANLFIY+IP+EFGDQEL AFQ+FG VLSAKVFVDKATGVSKCFGFVSY+S A+A
Sbjct: 344 EGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAA 403
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 326
QNAI MMNG LGGKKLKVQLKRD+ +P
Sbjct: 404 QNAIDMMNGRHLGGKKLKVQLKRDSNNGQP 433
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++SE+++ LF + + ++ I++ + S+GC FL ++E+A + A + K
Sbjct: 25 IPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVNACHNKKT 84
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G++ L VK+AD E ER
Sbjct: 85 LPGANSLLQVKYADGELER 103
>gi|18412143|ref|NP_567249.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|21536899|gb|AAM61231.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|222423375|dbj|BAH19660.1| AT4G03110 [Arabidopsis thaliana]
gi|332656872|gb|AEE82272.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 441
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/330 (67%), Positives = 256/330 (77%), Gaps = 12/330 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAEV +LFS YGTIKDLQILRG+QQTSKGCAFLKYETKEQA++A+E+INGKHK
Sbjct: 112 MLPKNVSEAEVQSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHK 171
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGS+VPLVVKWADTE+ER RR QKAQS L N D +PSLFGALPMGY PPYNGYG
Sbjct: 172 MEGSTVPLVVKWADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYG 231
Query: 121 Y-QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPP 176
Y Q G+YG Y LPP+QNQ F +I NQG NA++G SPD + + RN+ MPP
Sbjct: 232 YHQPPGTYG---YMLPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPP 288
Query: 177 SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQI 236
++GSGYPA+ G +P YP G++ RPL++SPGS+SP + ST G S Q
Sbjct: 289 GNYMGSGYPAMRGHPFPFAYPRGIVSPRPLSSSPGSISPGM-----STPLGIGLSSVVQT 343
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP GANLFIY+IP+EFGDQEL AFQ+FG VLSAKVFVDKATGVSKCFGFVSY+S A+A
Sbjct: 344 EGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAA 403
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 326
QNAI MMNG LGGKKLKVQLKRD+ +P
Sbjct: 404 QNAIDMMNGRHLGGKKLKVQLKRDSNNGQP 433
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++SE+++ LF + + ++ I++ + S+GC FL ++E+A + A + K
Sbjct: 25 IPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVNACHNKKT 84
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G++ L VK+AD E ER
Sbjct: 85 LPGANSLLQVKYADGELER 103
>gi|413948822|gb|AFW81471.1| hypothetical protein ZEAMMB73_420516 [Zea mays]
Length = 486
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/363 (60%), Positives = 262/363 (72%), Gaps = 40/363 (11%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++AE+ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG H
Sbjct: 128 MLPKNVTDAEMIDLFSKYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTH 187
Query: 60 KME--------------------------------GSSVPLVVKWADTEKERQARRAQKA 87
K+E GSSVPLVVKWADTEKERQAR+AQK+
Sbjct: 188 KIEFRMKDAYRDCNLQTSPISHTLDGTSSLHIIVLGSSVPLVVKWADTEKERQARKAQKS 247
Query: 88 QSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR-LPPMQNQPGFHG 145
Q++N+ NA++ + S+FGAL MGY P YNG+GYQ G+YGLMQY L P+QNQ F
Sbjct: 248 PFQSSNMLNANAMRQNSVFGALQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQNQAAFQN 307
Query: 146 IIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRP 205
++ P+NQ ++ RGA+ +L ++ PR++ S +GS Y +PGLQYP YPGG + HRP
Sbjct: 308 MVQPINQASSTRGANSELPPDLVPRSFN---STQLGSPYSPLPGLQYPGVYPGGPINHRP 364
Query: 206 LNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAF 265
+NS S N+N +SS + QIEGPPGANLFIYHIPQEFGD +L NAF +F
Sbjct: 365 FSNSHSSTKVQNLNANLPSSSPSSNPAP-QIEGPPGANLFIYHIPQEFGDHDLANAFHSF 423
Query: 266 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN-KQN 324
GRVLSAKVFVDKATGVSKCFGFVSY+SPASAQ AI++MNG QLGGKKLKVQLKRDN K +
Sbjct: 424 GRVLSAKVFVDKATGVSKCFGFVSYDSPASAQAAISVMNGYQLGGKKLKVQLKRDNSKHS 483
Query: 325 KPY 327
KP+
Sbjct: 484 KPF 486
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK +SEAE+ A+F + ++ ++R + + S+GC FL ++E+A A+ A + K
Sbjct: 41 VPKQMSEAELVAMFRGVALVDEVTVIRDRATRVSRGCCFLICPSREEADKAVTAYHNKRT 100
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 101 LPGASSPLQVKYADGELER 119
>gi|218196669|gb|EEC79096.1| hypothetical protein OsI_19721 [Oryza sativa Indica Group]
Length = 555
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 252/334 (75%), Gaps = 10/334 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKH
Sbjct: 140 MLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKH 199
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNG
Sbjct: 200 KIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNG 259
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 178
YGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS N PR++ S
Sbjct: 260 YGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SM 316
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
+GS Y VP +QYP YPG + RP NS S+ AN++ TSSS + G QIEG
Sbjct: 317 QLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSMKVPNANASSPTSSSTSSNPGPQIEG 376
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
PPGANLFIYHIPQEFGDQ+L AFQ FGRVLSAKVFVDKATG+SKCFGF+SY+SPASAQ
Sbjct: 377 PPGANLFIYHIPQEFGDQDLAGAFQGFGRVLSAKVFVDKATGLSKCFGFISYDSPASAQT 436
Query: 299 AIAMMNGCQLG-----GKKLKVQLKRDNKQNKPY 327
AI+MMNG QLG G K + N Q K +
Sbjct: 437 AISMMNGYQLGERFAQGTKFTQKTAARNSQEKTH 470
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK ++E E++A+F+ + ++ ++R + + S+GC FL ++E+A A+ A + K
Sbjct: 53 VPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADKAVNAYHNKRT 112
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 113 LPGASSPLQVKYADGELER 131
>gi|222631366|gb|EEE63498.1| hypothetical protein OsJ_18314 [Oryza sativa Japonica Group]
Length = 492
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 252/334 (75%), Gaps = 10/334 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKH
Sbjct: 77 MLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKH 136
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNG
Sbjct: 137 KIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNG 196
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 178
YGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS N PR++ S
Sbjct: 197 YGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SM 253
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
+GS Y VP +QYP YPG + RP NS S+ AN++ TSSS + G QIEG
Sbjct: 254 QLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSMKVPNANASSPTSSSTSSNPGPQIEG 313
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
PPGANLFIYHIPQEFGDQ+L AFQ FGRVLSAKVFVDKATG+SKCFGF+SY+SPASAQ
Sbjct: 314 PPGANLFIYHIPQEFGDQDLAGAFQGFGRVLSAKVFVDKATGLSKCFGFISYDSPASAQT 373
Query: 299 AIAMMNGCQLG-----GKKLKVQLKRDNKQNKPY 327
AI+MMNG QLG G K + N Q K +
Sbjct: 374 AISMMNGYQLGERFAQGTKFTQKTAARNSQEKTH 407
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 79
GC FL ++E+A A+ A + K + G+S PL VK+AD E ER
Sbjct: 25 GCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYADGELER 68
>gi|297848560|ref|XP_002892161.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
gi|297338003|gb|EFH68420.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
Length = 435
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/332 (62%), Positives = 238/332 (71%), Gaps = 25/332 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSE EV +LFS YGTIKDLQILRGS QTSKGC FLKYE KEQA+ A+EA+NG+H
Sbjct: 115 MLPKNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYEFKEQAVTAMEALNGRHI 174
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG++VPL+VKWADTE+ERQARR QK QS + D Q+PS+FGALPM Y PPYNGYG
Sbjct: 175 MEGANVPLIVKWADTERERQARRLQKVQSHVSR---PDPQNPSMFGALPMAYVPPYNGYG 231
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP--PSG 178
Y G+YG Y LPP+Q QP FH +I P NQGN L+ ++ PR A P+
Sbjct: 232 YHVPGTYG---YMLPPIQTQPAFHNVISP-NQGNGRALLGTALTESVPPRLAARRNFPTA 287
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
GY GLQYPM +P GM+ RP +VSP ++N+ S S Q EG
Sbjct: 288 LGNYGYH---GLQYPMAFPRGMVPPRP---PLTTVSPGISNNGTSIPSLL------QTEG 335
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P GANLFIY+IP+EFGDQEL AFQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A+AQN
Sbjct: 336 PAGANLFIYNIPREFGDQELAAAFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQN 395
Query: 299 AIAMMNGCQLGGKKLKVQLKRDNKQ----NKP 326
AI MNGCQL GKKLKVQLKRDN Q NKP
Sbjct: 396 AINTMNGCQLSGKKLKVQLKRDNGQQQQSNKP 427
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E ++ LFS + + ++ I++ + + +GC FL ++E+A + + K
Sbjct: 19 VPKHMTEIQLLTLFSEFSIVDEVNIIKEKTTRVPRGCCFLTCPSREEADKVINGFHNKKT 78
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E+ER
Sbjct: 79 LPGASSPLQVKYADGERER 97
>gi|42571323|ref|NP_973752.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189453|gb|AEE27574.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 438
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 241/329 (73%), Gaps = 33/329 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSE EV +LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H
Sbjct: 115 MLPKNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHI 174
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG++VPL+VKWADTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYG
Sbjct: 175 MEGANVPLIVKWADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYG 231
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGN--AMRGASPDLSSNMGP-----RNYA 173
Y G+YG Y LPP+Q Q FH +I P NQGN A++G + L+ ++ P RN+
Sbjct: 232 YHVPGTYG---YMLPPIQTQHAFHNVISP-NQGNGRALQGTA--LTESVPPRLAPRRNF- 284
Query: 174 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSSGGTGS 232
P+ GY GLQYPM +P GM+ R PL +VSP ++N+ S SS
Sbjct: 285 --PTALGNYGY---HGLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSS----- 330
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
Q EGP GANLFIY+IP+EF DQEL FQ FG+VLSAKVFVDKATG+SKCFGF+SY+S
Sbjct: 331 -LQTEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDS 389
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDN 321
A+AQNAI MNGCQL GKKLKVQLKRDN
Sbjct: 390 QAAAQNAINTMNGCQLSGKKLKVQLKRDN 418
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E ++ LF + + ++ I++ + + +GC FL T+E A + + + K
Sbjct: 19 VPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDADKVINSFHNKKT 78
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 79 LPGASSPLQVKYADGELER 97
>gi|22329313|ref|NP_171845.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449591|dbj|BAC41921.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|28950997|gb|AAO63422.1| At1g03457 [Arabidopsis thaliana]
gi|332189452|gb|AEE27573.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 429
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/327 (62%), Positives = 236/327 (72%), Gaps = 29/327 (8%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSE EV +LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H
Sbjct: 106 MLPKNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHI 165
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG++VPL+VKWADTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYG
Sbjct: 166 MEGANVPLIVKWADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYG 222
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMP 175
Y G+YG Y LPP+Q Q FH +I P NQGN L+ ++ P RN+
Sbjct: 223 YHVPGTYG---YMLPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF--- 275
Query: 176 PSGFVGSGYPAVPGLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSSGGTGSGG 234
P+ GY GLQYPM +P GM+ R PL +VSP ++N+ S SS
Sbjct: 276 PTALGNYGY---HGLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSS------L 322
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP GANLFIY+IP+EF DQEL FQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A
Sbjct: 323 QTEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQA 382
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDN 321
+AQNAI MNGCQL GKKLKVQLKRDN
Sbjct: 383 AAQNAINTMNGCQLSGKKLKVQLKRDN 409
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E ++ LF + + ++ I++ + + +GC FL T+E A + + + K
Sbjct: 19 VPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDADKVINSFHNKKT 78
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 79 LPGASSPLQVKYADGELER 97
>gi|9280669|gb|AAF86538.1|AC002560_31 F21B7.8 [Arabidopsis thaliana]
Length = 440
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/328 (61%), Positives = 236/328 (71%), Gaps = 24/328 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSE EV +LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H
Sbjct: 110 MLPKNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHI 169
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG++VPL+VKWADTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYG
Sbjct: 170 MEGANVPLIVKWADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYG 226
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMP 175
Y G+YG Y LPP+Q Q FH +I P NQGN L+ ++ P RN+
Sbjct: 227 YHVPGTYG---YMLPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF--- 279
Query: 176 PSGFVGSGYPAVPGLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSSGGTGSGG 234
P+ GY GLQYPM +P GM+ R PL +VSP ++N+ S SS T +
Sbjct: 280 PTALGNYGY---HGLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSSLQTEAIS 332
Query: 235 -QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
GP GANLFIY+IP+EF DQEL FQ FG+VLSAKVFVDKATG+SKCFGF+SY+S
Sbjct: 333 LMFSGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQ 392
Query: 294 ASAQNAIAMMNGCQLGGKKLKVQLKRDN 321
A+AQNAI MNGCQL GKKLKVQLKRDN
Sbjct: 393 AAAQNAINTMNGCQLSGKKLKVQLKRDN 420
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E ++ LF + + ++ I++ + + +GC FL T+E A + + + K
Sbjct: 14 VPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDADKVINSFHNKKT 73
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 74 LPGASSPLQVKYADGELER 92
>gi|30679366|ref|NP_849294.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|17529054|gb|AAL38737.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|332656873|gb|AEE82273.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 439
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/294 (65%), Positives = 226/294 (76%), Gaps = 11/294 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVSEAEV +LFS YGTIKDLQILRG+QQTSKGCAFLKYETKEQA++A+E+INGKHK
Sbjct: 112 MLPKNVSEAEVQSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHK 171
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEGS+VPLVVKWADTE+ER RR QKAQS L N D +PSLFGALPMGY PPYNGYG
Sbjct: 172 MEGSTVPLVVKWADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYG 231
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPS 177
Y G+YG Y LPP+QNQ F +I NQG NA++G SPD + + RN+ MPP
Sbjct: 232 YHPPGTYG---YMLPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPG 288
Query: 178 GFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIE 237
++GSGYPA+ G +P YP G++ RPL++SPGS+SP + ST G S Q E
Sbjct: 289 NYMGSGYPAMRGHPFPFAYPRGIVSPRPLSSSPGSISPGM-----STPLGIGLSSVVQTE 343
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
GP GANLFIY+IP+EFGDQEL AFQ+FG VLSAKVFVDKATGVSKCFG +S++
Sbjct: 344 GPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGKLSFD 397
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++SE+++ LF + + ++ I++ + S+GC FL ++E+A + A + K
Sbjct: 25 IPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVNACHNKKT 84
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G++ L VK+AD E ER
Sbjct: 85 LPGANSLLQVKYADGELER 103
>gi|413944941|gb|AFW77590.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 435
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/289 (65%), Positives = 227/289 (78%), Gaps = 7/289 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV+ AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG H
Sbjct: 130 MLPKNVTHAEMTDLFSKYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTH 189
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ Q++N+ NA++ Q S+FG L MGY P YNG
Sbjct: 190 KIEGSSVPLVVKWADTEKERQARKAQKAQFQSSNMLNANAMQQNSVFGGLQMGYVPQYNG 249
Query: 119 YGYQASGSYGLMQY-RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPS 177
+GYQ G+YGLMQY L P+QNQ F ++ PVNQG+++ GA+ ++S N PR++ S
Sbjct: 250 FGYQPQGTYGLMQYPPLSPVQNQAAFQNMVQPVNQGSSIHGANSEVSPNPVPRSFN---S 306
Query: 178 GFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIE 237
+GS Y +PGLQYP YPGG + HRP ++S S + +S S SSS + G QIE
Sbjct: 307 AQLGSPYSPLPGLQYPGVYPGGPINHRPFSSSHSS-TKVQNSSANSPSSSPSSNPGPQIE 365
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
GPPGANLFIYHIPQEFGD +L +AF +FGRVLSAKVFVDKATGVSKCFG
Sbjct: 366 GPPGANLFIYHIPQEFGDHDLASAFHSFGRVLSAKVFVDKATGVSKCFG 414
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK +SEAE++A+F + ++ ++R + S+GC F+ ++E+A A+ + K
Sbjct: 43 VPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEADKAVTTYHNKRT 102
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 103 LPGASSPLQVKYADGELER 121
>gi|168043683|ref|XP_001774313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674305|gb|EDQ60815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 224/332 (67%), Gaps = 32/332 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPK S+A+V+A+FS YGTIK+L +++GSQ TSKGCAFLKYETKEQA+AA+EA+NG HK
Sbjct: 110 MLPKAASKADVTAVFSQYGTIKELSVIKGSQPTSKGCAFLKYETKEQAVAAIEALNGVHK 169
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA---PPYN 117
MEGS LVVKWADTEKERQAR+ QKAQS ++ P PS+FGA+PMGY PPYN
Sbjct: 170 MEGSPSALVVKWADTEKERQARKVQKAQSVSS--PPIPGHQPSIFGAVPMGYVTTPPPYN 227
Query: 118 GYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA-MPP 176
GY YQ +Y M Y QPG G+ A+ G D+++ YA M P
Sbjct: 228 GYSYQPMSNYA-MAY-----PQQPGMVGL------PTAIPGTQSDMTA------YAPMQP 269
Query: 177 SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSG-GTGSGGQ 235
+ F QYP PY G M+GH+ + P ++P + +N +++ T G Q
Sbjct: 270 TTF------PFGAQQYPNPYQGQMMGHQG-QSYPSPIAPLIGMNNAQAAAAAVRTSVGPQ 322
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
EGP GANLFIYHIP EFGD EL AF +FG V+SAKVFVDK TG SKCFGFVSY++P +
Sbjct: 323 TEGPAGANLFIYHIPPEFGDDELSTAFSSFGNVISAKVFVDKTTGASKCFGFVSYDTPDA 382
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AQ AI +MNG QL GK+LKVQLKRD KQ+KPY
Sbjct: 383 AQAAINVMNGFQLSGKRLKVQLKRDTKQSKPY 414
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPK +SE ++ +FS GT+ ++ I++ + S+GC FL Y T+++A A+E + K
Sbjct: 23 LPKQMSEQQLVEIFSEAGTVNEINIIKDKLTKLSRGCCFLTYTTRQEADKAIEIFHNKRT 82
Query: 61 MEGSSVPLVVKWADTEKER 79
++ + PL VK+AD E ER
Sbjct: 83 LQPVASPLQVKYADGEMER 101
>gi|302786984|ref|XP_002975262.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
gi|300156836|gb|EFJ23463.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
Length = 427
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 228/335 (68%), Gaps = 20/335 (5%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPK+V+EAEV +FS YG IK+LQ+++GSQQT+K CAFLKYET+E+A A+EA+NG ++
Sbjct: 105 MLPKSVTEAEVRDVFSEYGNIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYR 164
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQ--SQANN--LPNADSQHPSL--FGALPMGYAP 114
MEG+S LVVKWADTEKERQAR+ QK+Q S A N L Q P+ FG LP+ P
Sbjct: 165 MEGASSALVVKWADTEKERQARKMQKSQTLSPATNGALAAPLPQQPASASFGPLPLA-TP 223
Query: 115 PYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSN-MGPRNYA 173
+NG+ YQAS +YG++ Y +QNQP G+ Q ++ G D+ S + P
Sbjct: 224 QFNGFAYQAS-TYGIVPYPASSLQNQPLISGMTTGTTQ--SLPGTLSDIGSGVLTP---- 276
Query: 174 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG 233
+ P+G+V S + V G QYP+ Y G +LG G+ + AV N + + S
Sbjct: 277 VQPAGYVNSAFSNVAGRQYPLAYQGALLGQA----YAGATTTAVVGYNSTPVAPKAKASI 332
Query: 234 G-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
Q EGPPGANLFIYHIP EFGD EL AF +FG V+SAKVFVDK TG+SKCFGFVSY+S
Sbjct: 333 TPQAEGPPGANLFIYHIPAEFGDSELSTAFASFGNVISAKVFVDKTTGISKCFGFVSYDS 392
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P +AQ+AI +MNG QL GK+LKVQLKRDNK NKPY
Sbjct: 393 PEAAQSAINVMNGFQLSGKRLKVQLKRDNKPNKPY 427
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++++ E+ +F G + D+ I++ S + S+GC FL Y ++ +A A++ + K
Sbjct: 18 IPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRSEADNAIDLFHNKKT 77
Query: 61 MEGSSVPLVVKWADTEKER 79
+ + P+ VK+AD E ER
Sbjct: 78 ISPMNSPMQVKYADGELER 96
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
+ P LF+ IP+ +EL F+ G V + DK+T S+ F++Y S + A
Sbjct: 6 KAPDAVKLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRSEA 65
Query: 297 QNAIAMMN 304
NAI + +
Sbjct: 66 DNAIDLFH 73
>gi|302811484|ref|XP_002987431.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
gi|300144837|gb|EFJ11518.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
Length = 428
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 226/337 (67%), Gaps = 23/337 (6%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPK+V+EAEV +FS YG IK+LQ+++GSQQT+K CAFLKYET+E+A A+EA+NG ++
Sbjct: 105 MLPKSVTEAEVRDVFSEYGNIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYR 164
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQ--SQANN------LPNADSQHPSLFGALPMGY 112
MEG+S LVVKWADTEKERQAR+ QK+Q S A N LP S FG LP+
Sbjct: 165 MEGASSALVVKWADTEKERQARKMQKSQTLSPATNGALAAPLPGQQPASAS-FGPLPLA- 222
Query: 113 APPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSN-MGPRN 171
P +NG+ YQAS +YG++ Y +QNQP G+ Q + G D+ S + P
Sbjct: 223 TPQFNGFAYQAS-TYGIVPYPASSLQNQPLISGMTTGTTQ--PLPGTLSDIGSGVLTP-- 277
Query: 172 YAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 231
+ P+G+V S + V G QYP+ Y G +LG G+ + AV N + +
Sbjct: 278 --VQPAGYVNSAFSNVAGRQYPLAYQGALLGQA----YAGATTTAVVGYNSTPVAPKAKA 331
Query: 232 SGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
S Q EGPPGANLFIYHIP EFGD EL AF +FG V+SAKVFVDK TG+SKCFGFVSY
Sbjct: 332 SITPQAEGPPGANLFIYHIPAEFGDSELSTAFASFGNVISAKVFVDKTTGISKCFGFVSY 391
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SP +AQ+AI +MNG QL GK+LKVQLKRDNK NKPY
Sbjct: 392 DSPEAAQSAINVMNGFQLSGKRLKVQLKRDNKPNKPY 428
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++++ E+ +F G + D+ I++ S + S+GC FL Y ++ +A A++ + K
Sbjct: 18 IPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRSEADNAIDLFHNKKT 77
Query: 61 MEGSSVPLVVKWADTEKER 79
+ + P+ VK+AD E ER
Sbjct: 78 ISPMNSPMQVKYADGELER 96
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
+ P LF+ IP+ +EL F+ G V + DK+T S+ F++Y S + A
Sbjct: 6 KAPDAVKLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRSEA 65
Query: 297 QNAIAMMN 304
NAI + +
Sbjct: 66 DNAIDLFH 73
>gi|388511171|gb|AFK43647.1| unknown [Medicago truncatula]
Length = 218
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/222 (74%), Positives = 185/222 (83%), Gaps = 6/222 (2%)
Query: 108 LPMGYAPPYNGYGYQASGSYGLMQYRLPP-MQNQPGFHGIIPPVNQGNAMRGASPDLSSN 166
+PMGY PPYNGYGYQA GSYGLM YR+PP MQNQPG+H ++P +NQGNA+R PDL N
Sbjct: 1 MPMGYVPPYNGYGYQAPGSYGLMPYRMPPPMQNQPGYHNMMPHMNQGNALR---PDLGPN 57
Query: 167 MGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS 226
M PRNY +PP+ +VGS YPAVPGLQ+PM YPGGM+ RPLN+ PGSV P+ N N +TSS
Sbjct: 58 MNPRNYHVPPASYVGS-YPAVPGLQHPMAYPGGMISPRPLNSPPGSVLPSGGNGNSATSS 116
Query: 227 SGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
SGG Q EGPPGANLFIYHIPQEFGDQEL NAFQ FGRVLSAKVFVDKATGVSKCF
Sbjct: 117 GSSKNSGGGQAEGPPGANLFIYHIPQEFGDQELANAFQPFGRVLSAKVFVDKATGVSKCF 176
Query: 286 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
GFVSY+SP +AQ+AI+MMNGCQLGGKKLKVQ KRDNK KPY
Sbjct: 177 GFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKPGKPY 218
>gi|168002776|ref|XP_001754089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694643|gb|EDQ80990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 223/351 (63%), Gaps = 55/351 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPK S+A+V A+FS YG+IK+L +++GSQ TSKGCAFLKYETKEQA+AA+EA+NG H+
Sbjct: 110 MLPKGASKADVMAVFSPYGSIKELSVIKGSQPTSKGCAFLKYETKEQAIAAIEALNGVHR 169
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA---PPYN 117
MEGS LVVKWADTEKERQAR+ QKAQS ++ P Q PS+FGA+PMGY PPYN
Sbjct: 170 MEGSPSALVVKWADTEKERQARKVQKAQSVSS--PPIPGQQPSIFGAVPMGYVTAPPPYN 227
Query: 118 GYGYQASGSYGLMQYRLPPMQN-------QPGFHGIIPPVNQGNAMRGASPDLSSN--MG 168
GY YQ L+Q P+ N QPG G+ A+ G+ DL++ M
Sbjct: 228 GYPYQP-----LVQ----PISNYAIAYPQQPGMVGL------PTAIPGSQSDLTAYAPMQ 272
Query: 169 PRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSG 228
P Y G QYP+PY G ++GH+ + P + P++ N + ++
Sbjct: 273 PATYPFA-------------GQQYPVPYQGQIIGHQG-QSYPSPLPPSLIGMNTAQVAAA 318
Query: 229 GTGSGGQ------------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVD 276
Q + GP GANLFIYHIP EFGDQEL AF +FG V+SAKVFVD
Sbjct: 319 AIVHFVQFPTSVQAVCVLYLAGPAGANLFIYHIPPEFGDQELSTAFSSFGNVISAKVFVD 378
Query: 277 KATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
K TG SKCFGFVSY++P +AQ AI +MNG QL GK+LKVQLKRD KQ KPY
Sbjct: 379 KTTGASKCFGFVSYDTPEAAQAAINVMNGFQLSGKRLKVQLKRDTKQRKPY 429
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPK +SE ++ +FS GT+ ++ I++ + S+GC FL Y T+++A A+E + K
Sbjct: 23 LPKQMSEQQLVEVFSEAGTVHEINIIKDKLTKQSRGCCFLTYTTRQEADKAIEIFHNKRT 82
Query: 61 MEGSSVPLVVKWADTEKER 79
++ + PL VK+AD E ER
Sbjct: 83 LQPVASPLQVKYADGEMER 101
>gi|115473901|ref|NP_001060549.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|33354192|dbj|BAC81150.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|50510234|dbj|BAD31432.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|113612085|dbj|BAF22463.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|215713561|dbj|BAG94698.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/328 (48%), Positives = 213/328 (64%), Gaps = 15/328 (4%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG--CAFLKYETKEQALAALEAINGK 58
MLP++V E EVSALFS YG I+ L++LR Q+T K CA L++ +KE A AA+EA+NG
Sbjct: 108 MLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKAAACAILEFGSKEHARAAIEALNGT 167
Query: 59 HKM-EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLF---GALPMGYAP 114
+ GSS LVVK ADTE+E+QAR+AQKAQ+Q + P P L GA M + P
Sbjct: 168 RVVFNGSSATLVVKLADTEREKQARKAQKAQAQPSK-PLRFYLFPQLLSISGAPQMSFLP 226
Query: 115 PYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPR-NYA 173
PYN Y+ G YG + L + + P VNQGN ++G + ++ P+ +
Sbjct: 227 PYNVLDYKVPGHYGHTKNPLAL------YSTMYPHVNQGNLLQGLNTNIFPGTDPKISNL 280
Query: 174 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG 233
+ +G++ YP + GL YP+ Y G ++G P S G V+ ++SN SS+ T G
Sbjct: 281 IQSAGYIQPPYPDLSGLHYPVSYAGALVGDTPQYFSDGKVNIPNSHSN-HASSAANTKIG 339
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
+IEGPP ANLF+Y IPQE+GD++L N FQ FGR+LS KVF+D+ATGVSKCFGFVSY++P
Sbjct: 340 SKIEGPPRANLFVYDIPQEYGDEDLANLFQEFGRILSTKVFIDRATGVSKCFGFVSYDTP 399
Query: 294 ASAQNAIAMMNGCQLGGKKLKVQLKRDN 321
ASAQ AI MNG Q+GGK LKVQLKR+
Sbjct: 400 ASAQAAIRRMNGSQIGGKMLKVQLKRET 427
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P++++E ++ A+ D ++R S+GC F+ ++E+A A+ A + K
Sbjct: 19 VPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEADKAIAAYHNKCT 78
Query: 61 MEGSSVPLVVKWADTEKERQA 81
+ G+S + VK+AD E ER A
Sbjct: 79 LPGASRAMQVKYADGELERLA 99
>gi|218200205|gb|EEC82632.1| hypothetical protein OsI_27223 [Oryza sativa Indica Group]
gi|222637626|gb|EEE67758.1| hypothetical protein OsJ_25469 [Oryza sativa Japonica Group]
Length = 497
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 222/392 (56%), Gaps = 73/392 (18%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLP++V E EVSALFS YG I+ L++LR Q+T K CA L++ +KE A AA+EA+NG
Sbjct: 108 MLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKACAILEFGSKEHARAAIEALNGTRV 167
Query: 61 M-EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLF---GALPMGYAPPY 116
+ GSS LVVK ADTE+E+QAR+AQKAQ+Q + P P L GA M + PPY
Sbjct: 168 VFNGSSATLVVKLADTEREKQARKAQKAQAQPSK-PLRFYLFPQLLSISGAPQMSFLPPY 226
Query: 117 NGYGYQASGSY-----GLM----------------------------------QYRLPPM 137
N Y+ G+ LM Q+ L P+
Sbjct: 227 NVLDYKTEGTTDPELKDLMKMTNDKLEMLVTELKSVVNLLENRVTYNDPIQPIQHSLLPV 286
Query: 138 QNQ----------------PGFHG-----------IIPPVNQGNAMRGASPDLSSNMGPR 170
++ PG +G + P VNQGN ++G + ++ P+
Sbjct: 287 EHDEKQYKPNECDSKTLEVPGHYGHTKNPLALYSTMYPHVNQGNLLQGLNTNIFPGTDPK 346
Query: 171 -NYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG 229
+ + +G++ YP + GL YP+ Y G ++G P S G V+ ++SN SS+
Sbjct: 347 ISNLIQSAGYIQPPYPDLSGLHYPVSYAGALVGDTPQYFSDGKVNIPNSHSN-HASSAAN 405
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
T G +IEGPP ANLF+Y IPQE+GD++L N FQ FGR+LS KVF+D+ATGVSKCFGFVS
Sbjct: 406 TKIGSKIEGPPRANLFVYDIPQEYGDEDLANLFQEFGRILSTKVFIDRATGVSKCFGFVS 465
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 321
Y++PASAQ AI MNG Q+GGK LKVQLKR+
Sbjct: 466 YDTPASAQAAIRRMNGSQIGGKMLKVQLKRET 497
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P++++E ++ A+ D ++R S+GC F+ ++E+A A+ A + K
Sbjct: 19 VPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEADKAIAAYHNKCT 78
Query: 61 MEGSSVPLVVKWADTEKERQA 81
+ G+S + VK+AD E ER A
Sbjct: 79 LPGASRAMQVKYADGELERLA 99
>gi|49328140|gb|AAT58838.1| unknown protein, contains RNA recognition motif,PF00076 [Oryza
sativa Japonica Group]
Length = 381
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 152/249 (61%), Positives = 183/249 (73%), Gaps = 5/249 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKH 59
MLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKH
Sbjct: 116 MLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKH 175
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNG 118
K+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNG
Sbjct: 176 KIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNG 235
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 178
YGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS N PR++ S
Sbjct: 236 YGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SM 292
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
+GS Y VP +QYP YPG + RP NS S+ AN++ TSSS + G QIEG
Sbjct: 293 QLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSMKVPNANASSPTSSSTSSNPGPQIEG 352
Query: 239 PPGANLFIY 247
+ FIY
Sbjct: 353 LSSWSQFIY 361
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 79
GC FL ++E+A A+ A + K + G+S PL VK+AD E ER
Sbjct: 64 GCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYADGELER 107
>gi|50508361|dbj|BAD30314.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|50510235|dbj|BAD31433.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|215687308|dbj|BAG91895.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 414
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/394 (40%), Positives = 207/394 (52%), Gaps = 75/394 (19%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK--GCAFLKYETKEQALAALEAINGK 58
MLP++V E EVSALFS YG I+ L++LR Q+T K CA L++ +KE A AA+EA+NG
Sbjct: 23 MLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKAAACAILEFGSKEHARAAIEALNGT 82
Query: 59 HKM-EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLF---GALPMGYAP 114
+ GSS LVVK ADTE+E+QAR+AQKAQ+Q + P P L GA M + P
Sbjct: 83 RVVFNGSSATLVVKLADTEREKQARKAQKAQAQPSK-PLRFYLFPQLLSISGAPQMSFLP 141
Query: 115 PYNGYGYQASGSYGLMQYRLPPMQN---------------------------QPGFHGII 147
PYN Y+ G+ L M N QP H ++
Sbjct: 142 PYNVLDYKTEGTTDPELKDLMKMTNDKLEMLVTELKSVVNLLENRVTYNDPIQPIQHSLL 201
Query: 148 PPVNQGNAMRGASPDLSSNMGPRNYAMP--PSGFVGSGYPAV--------------PG-- 189
P + + D + P +Y P + YP V PG
Sbjct: 202 PVEHDEKQYKPNECDSKTLEVPGHYGHTKNPLALYSTMYPHVNQGNLLQGLNTNIFPGTD 261
Query: 190 ------------LQYPMP----------YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSS 227
+Q P P Y G ++G P S G V+ ++SN SS+
Sbjct: 262 PKISNLIQSAGYIQPPYPDLSGLHYPVSYAGALVGDTPQYFSDGKVNIPNSHSN-HASSA 320
Query: 228 GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 287
T G +IEGPP ANLF+Y IPQE+GD++L N FQ FGR+LS KVF+D+ATGVSKCFGF
Sbjct: 321 ANTKIGSKIEGPPRANLFVYDIPQEYGDEDLANLFQEFGRILSTKVFIDRATGVSKCFGF 380
Query: 288 VSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 321
VSY++PASAQ AI MNG Q+GGK LKVQLKR+
Sbjct: 381 VSYDTPASAQAAIRRMNGSQIGGKMLKVQLKRET 414
>gi|327493207|gb|AEA86310.1| RNA-binding protein [Solanum nigrum]
Length = 187
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPKNVS+ EVS+LFS YGTI DLQILRGSQQ S+G AFLKYE KEQA+AA+EA+NGKH
Sbjct: 57 MLPKNVSDLEVSSLFSQYGTITDLQILRGSQQASRGYAFLKYEKKEQAIAAVEALNGKHT 116
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG++VPLVVKWADTE+ERQARR QKA SQA+N N+ QHPSL+G+L MGY PPYNGY
Sbjct: 117 MEGATVPLVVKWADTERERQARRTQKALSQASNASNS-GQHPSLYGSLSMGYMPPYNGYA 175
Query: 121 YQASGSYGLMQY 132
YQ G+YGLMQY
Sbjct: 176 YQTPGTYGLMQY 187
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 32 QTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 79
+ S+GC F+ ++E+A A+ A + K + G+S PL VK+AD ER
Sbjct: 1 RASRGCCFVICPSREEANKAITACHNKQTLPGASSPLQVKYADGVLER 48
>gi|270013480|gb|EFA09928.1| hypothetical protein TcasGA2_TC012080 [Tribolium castaneum]
Length = 469
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 185/336 (55%), Gaps = 36/336 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K + E +V LFS YGTI++ +LR + SKGCAF+ + +K+ AL+A++A++
Sbjct: 161 MLSKKLCENDVRTLFSGYGTIEECTVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQT 220
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S PLVVK+ADT+KE++ +R Q+ Q+ N A S P ++P +
Sbjct: 221 MEGCSAPLVVKFADTQKEKELKRQQQIQANVWNALAAPQLQTS-----PQQFSPVLSN-- 273
Query: 121 YQASGSYGLMQYR-----LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP 175
+ S L+Q L P Q G ++ P+ N + L++ P +
Sbjct: 274 --DATSLQLLQAMSGGSALLPQQLLTGAENLLAPLGVQNLVT-----LAAMSQPTAAPLC 326
Query: 176 PSGFVGSG----YPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 231
+ +G G GLQ M ++ GS+ +N + +++
Sbjct: 327 VANLLGKGAGVERTLTTGLQTGMSTSDL--------STYGSLI-----TNATLNAAAIAA 373
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS++
Sbjct: 374 AGKQIEGPDGCNLFIYHLPQEFTDTDLASTFLPFGPVISAKVFIDKQTNLSKCFGFVSFD 433
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+ SAQ AIA MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 NATSAQQAIAAMNGFQIGTKRLKVQLKRAKDASKPY 469
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F YG + + +LR SKGC F+ + T++ AL A +A++
Sbjct: 75 VPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFTRKAALQAQDALHNVKT 134
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 135 LNGMHHPIQMKPADSENRNERK 156
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS-YESPASAQNAIAM 302
+F+ +P+ + +L F+ +GRV S V DK TG SK FV+ + A+ Q A+
Sbjct: 70 MFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFTRKAALQAQDAL 129
Query: 303 MNGCQLGGKKLKVQLKRDNKQNK 325
N L G +Q+K + +N+
Sbjct: 130 HNVKTLNGMHHPIQMKPADSENR 152
>gi|91090137|ref|XP_976135.1| PREDICTED: similar to arrest CG31762-PC isoform 4 [Tribolium
castaneum]
Length = 494
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 185/336 (55%), Gaps = 36/336 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K + E +V LFS YGTI++ +LR + SKGCAF+ + +K+ AL+A++A++
Sbjct: 186 MLSKKLCENDVRTLFSGYGTIEECTVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQT 245
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S PLVVK+ADT+KE++ +R Q+ Q+ N A S P ++P +
Sbjct: 246 MEGCSAPLVVKFADTQKEKELKRQQQIQANVWNALAAPQLQTS-----PQQFSPVLSN-- 298
Query: 121 YQASGSYGLMQYR-----LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP 175
+ S L+Q L P Q G ++ P+ N + L++ P +
Sbjct: 299 --DATSLQLLQAMSGGSALLPQQLLTGAENLLAPLGVQNLVT-----LAAMSQPTAAPLC 351
Query: 176 PSGFVGSG----YPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 231
+ +G G GLQ M ++ GS+ +N + +++
Sbjct: 352 VANLLGKGAGVERTLTTGLQTGMSTSDL--------STYGSLI-----TNATLNAAAIAA 398
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS++
Sbjct: 399 AGKQIEGPDGCNLFIYHLPQEFTDTDLASTFLPFGPVISAKVFIDKQTNLSKCFGFVSFD 458
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+ SAQ AIA MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 NATSAQQAIAAMNGFQIGTKRLKVQLKRAKDASKPY 494
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F YG + + +LR SKGC F+ + T++ AL A +A++
Sbjct: 100 VPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFTRKAALQAQDALHNVKT 159
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 160 LNGMHHPIQMKPADSENRNERK 181
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS-YESPASAQNAIAM 302
+F+ +P+ + +L F+ +GRV S V DK TG SK FV+ + A+ Q A+
Sbjct: 95 MFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFTRKAALQAQDAL 154
Query: 303 MNGCQLGGKKLKVQLKRDNKQNK 325
N L G +Q+K + +N+
Sbjct: 155 HNVKTLNGMHHPIQMKPADSENR 177
>gi|340725302|ref|XP_003401011.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 4 [Bombus
terrestris]
Length = 360
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 191/369 (51%), Gaps = 51/369 (13%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G
Sbjct: 1 MLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADTEKERQ RR Q+ A N+ + + FGA
Sbjct: 61 MPGASSSLVVKFADTEKERQLRRMQQ---MAGNMSLLNPFVFNQFGAYGAYAQQAALMAA 117
Query: 121 YQASGSY----------GLMQYRLPPMQNQPGFHGIIPPVN---QGNAMRGASPDLSSNM 167
A G+Y G + + L M N ++PP + G + GA P L S
Sbjct: 118 ATAQGTYINPMAALVGAGQLPHALNGMPNP-----VVPPTSGTGTGQPVNGAIPSLPSPT 172
Query: 168 GPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS---- 209
P N+ M P+G P V P YPG L G L ++
Sbjct: 173 MP-NFNMAAQTPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNGEAALQHAAAYP 231
Query: 210 -----PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQEL 258
PG PAV A P T+ + G I GP G NLFIYH+PQEFGD EL
Sbjct: 232 GMQPYPGVAYPAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGEL 291
Query: 259 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 318
F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLK
Sbjct: 292 MQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLK 351
Query: 319 RDNKQNKPY 327
R ++PY
Sbjct: 352 RPKDASRPY 360
>gi|350403945|ref|XP_003486959.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
4-like [Bombus impatiens]
Length = 522
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 189/373 (50%), Gaps = 58/373 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G
Sbjct: 162 MLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQT 221
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL----PMGYAPPY 116
M G+S LVVK+ADTEKERQ RR Q+ + L +P +F
Sbjct: 222 MPGASSSLVVKFADTEKERQLRRMQQMAGNMSLL------NPFVFNQFGAYGAYAQQQAA 275
Query: 117 NGYGYQASGSY----------GLMQYRLPPMQNQPGFHGIIPPVN---QGNAMRGASPDL 163
A G+Y G + + L M N ++PP + G + GA P L
Sbjct: 276 LMAAATAQGTYINPMAALVGAGQLPHALNGMPNP-----VVPPTSGTGTGQPVNGAIPSL 330
Query: 164 SSNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS 209
S P N+ M P+G P V P YPG L G L ++
Sbjct: 331 PSPTMP-NFNMAAQTPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNGEAALQHA 389
Query: 210 ---------PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFG 254
PG PAV A P T+ + G I GP G NLFIYH+PQEFG
Sbjct: 390 AAYPGMQPYPGVAYPAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIYHLPQEFG 449
Query: 255 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 314
D EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LK
Sbjct: 450 DGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLK 509
Query: 315 VQLKRDNKQNKPY 327
VQLKR ++PY
Sbjct: 510 VQLKRPKDASRPY 522
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 78
GCAFL Y +++ A++A A++ K + G + P+ VK AD+E
Sbjct: 111 GCAFLTYYSRDSAISAQNALHEKRTLPGMNRPIQVKPADSENR 153
>gi|386769533|ref|NP_001246001.1| bruno-2, isoform I [Drosophila melanogaster]
gi|383291459|gb|AFH03675.1| bruno-2, isoform I [Drosophila melanogaster]
Length = 350
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 191/362 (52%), Gaps = 47/362 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 117 NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNAMRGASPDLSSNMGPRNY 172
G + + S +P +Q Q G P P+N A+ S L+ N+ N
Sbjct: 121 AG---RTNPSMAAALAAVPQVQ-QAGSAATAPTTLVPLNSTTAL---SASLTPNLLATNA 173
Query: 173 AMPPSGFVGS-------------------GYPAVPGLQYP------MPYPGGMLGHRPLN 207
A + + GY P P PY + G L
Sbjct: 174 AHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGPPNAADPYSSSLSG---LT 230
Query: 208 NSP--GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAF 265
N G+ S V S +++G TG QIEGP G+NLFIYH+PQEF D +L + F F
Sbjct: 231 NGAAYGAASQPVTTSALQAAAAGVTGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPF 288
Query: 266 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
G VLSAKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR K
Sbjct: 289 GNVLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAK 348
Query: 326 PY 327
PY
Sbjct: 349 PY 350
>gi|340725300|ref|XP_003401010.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 3 [Bombus
terrestris]
Length = 384
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 189/373 (50%), Gaps = 58/373 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G
Sbjct: 24 MLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQT 83
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL----PMGYAPPY 116
M G+S LVVK+ADTEKERQ RR Q+ + L +P +F
Sbjct: 84 MPGASSSLVVKFADTEKERQLRRMQQMAGNMSLL------NPFVFNQFGAYGAYAQQQAA 137
Query: 117 NGYGYQASGSY----------GLMQYRLPPMQNQPGFHGIIPPVN---QGNAMRGASPDL 163
A G+Y G + + L M N ++PP + G + GA P L
Sbjct: 138 LMAAATAQGTYINPMAALVGAGQLPHALNGMPNP-----VVPPTSGTGTGQPVNGAIPSL 192
Query: 164 SSNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS 209
S P N+ M P+G P V P YPG L G L ++
Sbjct: 193 PSPTMP-NFNMAAQTPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNGEAALQHA 251
Query: 210 ---------PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFG 254
PG PAV A P T+ + G I GP G NLFIYH+PQEFG
Sbjct: 252 AAYPGMQPYPGVAYPAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIYHLPQEFG 311
Query: 255 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 314
D EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LK
Sbjct: 312 DGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLK 371
Query: 315 VQLKRDNKQNKPY 327
VQLKR ++PY
Sbjct: 372 VQLKRPKDASRPY 384
>gi|221307768|gb|ACM16743.1| MIP02242p [Drosophila melanogaster]
Length = 350
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 191/362 (52%), Gaps = 47/362 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 117 NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNAMRGASPDLSSNMGPRNY 172
G + + S +P +Q Q G P P+N A+ S L+ N+ N
Sbjct: 121 AG---RTNPSMAAALAAVPQVQ-QAGSAATAPTTLVPLNSTTAL---SASLTPNLLATNA 173
Query: 173 AMPPSGFVGS-------------------GYPAVPGLQYP------MPYPGGMLGHRPLN 207
A + + GY P P PY + G L
Sbjct: 174 AHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGPPNAADPYSSSLSG---LT 230
Query: 208 NSP--GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAF 265
N G+ S V S +++G TG QIEGP G+NLFIYH+PQEF D +L + F F
Sbjct: 231 NGAAYGAASQPVTTSALQAAAAGVTGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPF 288
Query: 266 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
G VLSAKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR K
Sbjct: 289 GNVLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAVK 348
Query: 326 PY 327
PY
Sbjct: 349 PY 350
>gi|242013336|ref|XP_002427366.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212511730|gb|EEB14628.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 382
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 180/356 (50%), Gaps = 45/356 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG + SKGCAF+K+ + ++A AA+ ++G
Sbjct: 43 MLSKQQSEEDVRQLFGPFGAIEECTILRGPEGASKGCAFVKFSSHQEAQAAINNLHGSQT 102
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL-PNADSQHPSLFGALPMGYAPPYNGY 119
M G+S LVVK+ADTEKERQ RR Q+ L P +Q +
Sbjct: 103 MPGASSSLVVKFADTEKERQLRRMQQMAGNIGLLNPFVFNQFGAYGAYAQQAALMAAASQ 162
Query: 120 GYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNAMRGASPD---------LSSN 166
G S L N +G +P P +M +P+ + SN
Sbjct: 163 GTYISPMAALASQLPHTTLNGQHVNGAMPSLPSPTIPNFSMAAQTPNGQPGGTEPGVYSN 222
Query: 167 MGPRNY-------AMPPSGFVGS--------GYPAVPGLQYPMPYPGGMLGHRPLNNSPG 211
P+ Y ++PP G G G P PG+ +P Y P
Sbjct: 223 GIPQTYPAYALHLSIPPQGLNGEAALQTAFPGMPPYPGVAFPAVY----------GQFPQ 272
Query: 212 SVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 271
++ PA+A+ P+ G I GP G NLFIYH+PQEFGD EL F FG V+S+
Sbjct: 273 AIPPALASVPPTHR------EGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISS 326
Query: 272 KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 327 KVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 382
>gi|28574145|ref|NP_788039.1| bruno-2, isoform D [Drosophila melanogaster]
gi|442627591|ref|NP_001260410.1| bruno-2, isoform K [Drosophila melanogaster]
gi|28380348|gb|AAO41184.1| bruno-2, isoform D [Drosophila melanogaster]
gi|440213740|gb|AGB92945.1| bruno-2, isoform K [Drosophila melanogaster]
Length = 737
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 191/362 (52%), Gaps = 47/362 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 388 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 447
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 448 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 507
Query: 117 NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNAMRGASPDLSSNMGPRNY 172
G + + S +P +Q Q G P P+N A+ S L+ N+ N
Sbjct: 508 AG---RTNPSMAAALAAVPQVQ-QAGSAATAPTTLVPLNSTTAL---SASLTPNLLATNA 560
Query: 173 AMPPSGFVGS-------------------GYPAVPGLQYP------MPYPGGMLGHRPLN 207
A + + GY P P PY + G L
Sbjct: 561 AHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGPPNAADPYSSSLSG---LT 617
Query: 208 NSP--GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAF 265
N G+ S V S +++G TG QIEGP G+NLFIYH+PQEF D +L + F F
Sbjct: 618 NGAAYGAASQPVTTSALQAAAAGVTGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPF 675
Query: 266 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
G VLSAKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR K
Sbjct: 676 GNVLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAK 735
Query: 326 PY 327
PY
Sbjct: 736 PY 737
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E + +F +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 302 IPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 361
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 362 LDGMHHPIQMKPADSENRNERK 383
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 236 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 286 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYT 345
Query: 293 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
+A A A+ N L G +Q+K + +N+
Sbjct: 346 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 379
>gi|332375404|gb|AEE62843.1| unknown [Dendroctonus ponderosae]
Length = 361
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 184/336 (54%), Gaps = 28/336 (8%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V ALFS GTI++ +LR S+GCAF+ + K AL A+++++
Sbjct: 45 MLSKKFCENDVRALFSGVGTIEECTVLRDPAGNSRGCAFVTFSNKHAALLAIKSLHQSQT 104
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAP--PYNG 118
MEG S PLVVK+ADT+KE++ +R Q+ Q+ N P+L + P Y+P P
Sbjct: 105 MEGCSAPLVVKFADTQKEKELKRHQQMQASVWN----ALATPTL-ASPPQQYSPVLPSEA 159
Query: 119 YGYQ---ASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP 175
Q A G L+Q + + N ++ P+ N + L++ P A
Sbjct: 160 TSLQLLQAMGGSALLQQQF--LSNS---ENLLAPIGVQNLV-----TLAAMTQPATAATA 209
Query: 176 P---SGFVGSGYPAVPGLQYPMPYPGGMLGHRP-LNNSPGSVSPAVANSNPSTSSSGGTG 231
P + +G G G++ + G G + L + S +N + +++
Sbjct: 210 PLCMANLLGKG----AGVERTLTAAGLQAGLQSGLGTTTDLSSYGSLITNATLNAAAVAA 265
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS++
Sbjct: 266 AGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGPVISAKVFIDKQTNLSKCFGFVSFD 325
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+ SAQ AIA MNG Q+G K+LKVQLKR + KPY
Sbjct: 326 NANSAQQAIAAMNGFQIGTKRLKVQLKRAKEAAKPY 361
>gi|410921166|ref|XP_003974054.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 3 [Takifugu
rubripes]
Length = 491
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 181/343 (52%), Gaps = 39/343 (11%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G
Sbjct: 172 MLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQT 231
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q FG A P++ Y
Sbjct: 232 MPGASSSLVVKFADTDKERTIRRMQQMVGQ--------------FGIFNPAIALPFSTY- 276
Query: 121 YQASGSYGLMQYRLPPMQNQPGFH---GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPS 177
+S ++ LMQ + M G + + P Q + M GA L+ N P P S
Sbjct: 277 --SSYAHALMQQQAAIMAASHGGYLTPSVAFPATQIHQM-GA---LNINSLPPTPMTPVS 330
Query: 178 GF----VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG 233
G AVP + P+ + H+P N P +V N P S+ T +
Sbjct: 331 GLSSPPANITTSAVPSIVTPIVNGFTGIPHQP-NGHP-AVETMYTNGLPPYSTQSPTAAD 388
Query: 234 G---------QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 284
Q GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKC
Sbjct: 389 TLQQAFTGVQQYTGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKC 448
Query: 285 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
FGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 449 FGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 491
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E A+ A A++ +
Sbjct: 85 IPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKT 144
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 145 LPGMTRPIQVKPADSESRGEDRK 167
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 290
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 291 ESPASAQNAI 300
ES AQNA+
Sbjct: 130 ESAIKAQNAL 139
>gi|260788580|ref|XP_002589327.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
gi|229274504|gb|EEN45338.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
Length = 336
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 180/339 (53%), Gaps = 46/339 (13%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E++V +F+ YGTI++ +LR S+GCAF+ + T+ AL A++A++
Sbjct: 32 MVSKKCNESDVRIMFAPYGTIEECTVLRDQNGQSRGCAFVTFSTRASALNAIKALHQSQT 91
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S PLVVK+ADT+K+++ +R Q+ +QA + NA + AL Y
Sbjct: 92 MEGCSSPLVVKFADTQKDKEQKRLQQLNAQAWSQMNALAS----LAALNPQYLALLAAAT 147
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
S G G + P++ A + S +G +G
Sbjct: 148 AANQASAG------------TGSSSAVNPLSSTGAGGNTNTSALSGLGAL------AGLQ 189
Query: 181 GSGYP-AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG------ 233
G G P + GLQ G+ G LN + G+ + + S+SG G+G
Sbjct: 190 GLGTPNSTLGLQALT----GLSGMGSLNGTLGAAT--------ALSASGTAGNGVDPLSQ 237
Query: 234 -----GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 288
Q GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFV
Sbjct: 238 AYSGIQQFAGPEGANLFIYHLPQEFGDQDLMQTFMPFGNVISAKVFIDKQTNLSKCFGFV 297
Query: 289 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SY++P +AQ AI MNG Q+G K+LKVQLKR NKPY
Sbjct: 298 SYDNPVAAQAAIQAMNGFQIGMKRLKVQLKRPKDANKPY 336
>gi|218196668|gb|EEC79095.1| hypothetical protein OsI_19720 [Oryza sativa Indica Group]
Length = 338
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 119/154 (77%), Gaps = 4/154 (2%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 95
GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+
Sbjct: 178 GCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMS 237
Query: 96 NADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGN 154
N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+
Sbjct: 238 NPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGS 297
Query: 155 AMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 188
++RG + +LS N PR++ S +GS Y VP
Sbjct: 298 SIRGVNSELSPNSAPRSFN---STQLGSPYSPVP 328
>gi|393906351|gb|EJD74254.1| HrETR-1 protein [Loa loa]
Length = 507
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 185/379 (48%), Gaps = 67/379 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V ALF+ +G I ++ +LRG+ SKGCAF+K+ T QA A+ A++G
Sbjct: 144 MLSKQHNEDDVRALFAPFGVIDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQT 203
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGA------------- 107
M G+S LVVK+ADTEKERQ RR Q+ +Q L ++
Sbjct: 204 MPGASSSLVVKFADTEKERQLRRMQQMAAQMGLLNPVLVNQAGVYNTAYQQLLQQQATLV 263
Query: 108 ---------LPMGYAPPYNGYGYQASGSYG----LMQYRLPPMQNQPGFHGIIPPVNQGN 154
P+ AP +G+ L Q+ L P+ P + Q +
Sbjct: 264 AAQTAAAAYFPVAMAPQTALTAAGLAGTTNPATFLTQHPLQPISALP--------LQQAH 315
Query: 155 AMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-------AVPGLQYPMPYPGGMLGHRPLN 207
+++ S LS P +YA + V P AV Y +P G + P
Sbjct: 316 SVQAISA-LSQPYAPVDYAATAAASVTQYAPSSTAAAVAVDSTAYTLPASGTL----PAG 370
Query: 208 NSPGSVSPAVAN--------SNPSTSSSGGT-----------GSGGQIEGPPGANLFIYH 248
P P+V N +NP + G+ ++ GP G NLFIYH
Sbjct: 371 TIPAVTLPSVYNPLVNLEQQANPYNQALQQAIALQQAAILFPGAQKEVLGPEGCNLFIYH 430
Query: 249 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 308
+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVSY++ ASA AI MNG Q+
Sbjct: 431 LPQEFGDTELMQMFMPFGHVISAKVFIDRATNQSKCFGFVSYDNTASAMAAIQAMNGFQI 490
Query: 309 GGKKLKVQLKRDNKQNKPY 327
G K+LKVQLKR ++KPY
Sbjct: 491 GMKRLKVQLKR--PRDKPY 507
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I + IL+ KGCAFL Y ++ A+ A++ +
Sbjct: 51 IPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRCQAALHDQKT 110
Query: 61 MEGSSVPLVVKWADTE 76
+ G + + VK AD E
Sbjct: 111 LPGMNRAMQVKPADNE 126
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 200 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQEL 258
M+ H+ N S + N + S S T S G ++ LF+ IP+ +++L
Sbjct: 1 MVHHQQQNKGKQQQSGSKMNGDSRMSRSSSTDSNGFPVKDADTIKLFVGQIPRNLEEKDL 60
Query: 259 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQL 317
+ F+ FG++ + DK TG+ K F++Y SA A ++ + L G +Q+
Sbjct: 61 RHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRCQAALHDQKTLPGMNRAMQV 120
Query: 318 KRDNKQNKP 326
K + +++P
Sbjct: 121 KPADNESRP 129
>gi|66269429|gb|AAY43159.1| napor protein short isoform [Danio rerio]
Length = 473
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 184/349 (52%), Gaps = 43/349 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 146 MVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ S SL G G P Y
Sbjct: 206 MEGCSSPMVVKFADTQKDKEQRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALL 263
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
QA+ S L G + Q A G++ + S+ MG G
Sbjct: 264 QQATSSSNL---------------GAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLA 306
Query: 181 GS-----GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPA-------------VANSNP 222
G+ A+ G M G LG L+N GS P A + P
Sbjct: 307 GATVGLNNINALAGSVNSMAALNGGLGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALP 364
Query: 223 STSSSG----GTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 278
+ S + +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK
Sbjct: 365 TLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQ 424
Query: 279 TGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 425 TNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 473
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 55 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 114
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 115 KTLTGMHHPIQMKPADSEK 133
>gi|60729622|pir||JC7967 Napor protein - zebra fish
gi|14030309|gb|AAK52851.1|AF321194_1 Napor [Danio rerio]
Length = 441
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 184/349 (52%), Gaps = 43/349 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ S SL G G P Y
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALL 231
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
QA+ S L G + Q A G++ + S+ MG G
Sbjct: 232 QQATSSSNL---------------GAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLA 274
Query: 181 GS-----GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPA-------------VANSNP 222
G+ A+ G M G LG L+N GS P A + P
Sbjct: 275 GATVGLNNINALAGSVNSMAALNGGLGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALP 332
Query: 223 STSSSG----GTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 278
+ S + +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK
Sbjct: 333 TLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQ 392
Query: 279 TGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 393 TNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 441
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLTGMHHPIQMKPADSEK 101
>gi|340725298|ref|XP_003401009.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 2 [Bombus
terrestris]
Length = 374
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 184/359 (51%), Gaps = 41/359 (11%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G
Sbjct: 25 MLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADTEKERQ R + Q A N+ +P +F G Y
Sbjct: 85 MPGASSSLVVKFADTEKERQLR---RMQQMAGNM---SLLNPFVFNQF--GAYGAYAQQQ 136
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVN---QGNAMRGASPDLSSNMGPRNYAM--- 174
+ + PM G + +N G + GA P L S P N+ M
Sbjct: 137 AALMAAATAQGTYINPMAALVGAGQLPHALNGTGTGQPVNGAIPSLPSPTMP-NFNMAAQ 195
Query: 175 PPSGFVGSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS---------PGSVS 214
P+G P V P YPG L G L ++ PG
Sbjct: 196 TPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNGEAALQHAAAYPGMQPYPGVAY 255
Query: 215 PAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 268
PAV A P T+ + G I GP G NLFIYH+PQEFGD EL F FG V
Sbjct: 256 PAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFIPFGNV 315
Query: 269 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 316 ISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDASRPY 374
>gi|340725296|ref|XP_003401008.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 1 [Bombus
terrestris]
Length = 373
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 184/359 (51%), Gaps = 41/359 (11%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G
Sbjct: 24 MLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQT 83
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADTEKERQ R + Q A N+ +P +F G Y
Sbjct: 84 MPGASSSLVVKFADTEKERQLR---RMQQMAGNM---SLLNPFVFNQF--GAYGAYAQQQ 135
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVN---QGNAMRGASPDLSSNMGPRNYAM--- 174
+ + PM G + +N G + GA P L S P N+ M
Sbjct: 136 AALMAAATAQGTYINPMAALVGAGQLPHALNGTGTGQPVNGAIPSLPSPTMP-NFNMAAQ 194
Query: 175 PPSGFVGSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS---------PGSVS 214
P+G P V P YPG L G L ++ PG
Sbjct: 195 TPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPAQGLPNGEAALQHAAAYPGMQPYPGVAY 254
Query: 215 PAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 268
PAV A P T+ + G I GP G NLFIYH+PQEFGD EL F FG V
Sbjct: 255 PAVYGQFPQAIPQPMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFIPFGNV 314
Query: 269 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 315 ISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDASRPY 373
>gi|328776307|ref|XP_393833.4| PREDICTED: CUGBP Elav-like family member 4-like [Apis mellifera]
Length = 525
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 192/386 (49%), Gaps = 81/386 (20%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G
Sbjct: 162 MLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQT 221
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADTEKERQ R + Q A N+ SL + +N +G
Sbjct: 222 MPGASSSLVVKFADTEKERQLR---RMQQMAGNM--------SLLNPFNV-----FNQFG 265
Query: 121 YQAS---------------GSY------------GLMQYRLPPMQNQPGFHGIIPPVN-- 151
+ G+Y G + + L M N ++PP +
Sbjct: 266 AYGAYAQQQAALMAAATAQGTYINPMAALAHVGAGQLPHALNGMPNP-----VVPPTSGT 320
Query: 152 -QGNAMRGASPDLSSNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML------ 201
G + GA P L S P N+ M P+G P V P YPG L
Sbjct: 321 GTGQPVNGAIPSLPSPTMP-NFNMAAQTPNGQPAGSDPGVYTNGIPQTYPGHALHLSIPA 379
Query: 202 -----GHRPLNNS---------PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPG 241
G L ++ PG PAV A P T+ + G I GP G
Sbjct: 380 QGLPNGEAALQHAAAYPGMQPYPGVAYPAVYGQFPQAIPQPMTAVAPTQREGCSISGPEG 439
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 440 CNLFIYHLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQ 499
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 500 AMNGFQIGMKRLKVQLKRPKDASRPY 525
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 78
GCAFL Y +++ A++A A++ K + G + P+ VK AD+E
Sbjct: 111 GCAFLTYYSRDSAISAQNALHEKRTLPGMNRPIQVKPADSENR 153
>gi|301776386|ref|XP_002923617.1| PREDICTED: CUGBP Elav-like family member 5-like [Ailuropoda
melanoleuca]
Length = 418
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 181/346 (52%), Gaps = 47/346 (13%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 101 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 161 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAY- 208
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 209 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 261
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 262 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 318
Query: 222 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
P+ S Q GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT
Sbjct: 319 PAFSGVQ------QYTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQ 372
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 373 SKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 418
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 14 IPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR-----AQKAQSQANNL 94
+ G + P+ VK AD+E R+ K QS+ + L
Sbjct: 74 LPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSEEDVL 112
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 301
LF+ IP+ +++L F+ FGR+ V D TG+ K F++Y + SA A A
Sbjct: 8 KLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTA 67
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNK 325
+ L G +Q+K + +++
Sbjct: 68 LHEQKTLPGMARPIQVKPADSESR 91
>gi|66269433|gb|AAY43161.1| napor protein isoform [Danio rerio]
Length = 483
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/346 (39%), Positives = 184/346 (53%), Gaps = 41/346 (11%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 160 MVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 219
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ S SL G G P Y
Sbjct: 220 MEGCSSPMVVKFADTQKDKEQRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALL 277
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
QA+ S L G + Q A G++ + S+ MG G
Sbjct: 278 QQATSSSNL---------------GAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLA 320
Query: 181 GS--GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPA-------------VANSNPSTS 225
G+ G + L GG LG L+N GS P A + P+
Sbjct: 321 GATVGLNNINALAGMAALNGG-LGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALPTLY 377
Query: 226 SSG----GTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
S + +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +
Sbjct: 378 SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNL 437
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 438 SKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 69 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 128
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 129 KTLTGMHHPIQMKPADSEK 147
>gi|212286102|ref|NP_001131056.1| CUGBP, Elav-like family member 5 [Xenopus laevis]
gi|197359138|gb|ACH69785.1| RNA binding protein Bruno-like 5 [Xenopus laevis]
Length = 484
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 188/366 (51%), Gaps = 60/366 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE EV+++F +G+I++ +LRG +SKGCAF+K+ + +A AA++A++G
Sbjct: 140 MLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q PSL ALP+ PY+ Y
Sbjct: 200 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIF------TPSL--ALPIS---PYSAY- 247
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + G + + P V + ++ N P P SG
Sbjct: 248 -----AQALMQQQTTVLSTSHGSY-LSPSVAFPSCHIQQIGAVNLNGLPAAPITPASGLH 301
Query: 181 G---SGYPAVPGLQYPM--------PYPGGMLGHRPLNNS-PGSVSPAVANSNPSTSSSG 228
G AVPGL P+ P+P H L+ S+ P A S + S
Sbjct: 302 SPPVIGTAAVPGLVAPLTNGFPGLVPFPSS---HPALDTIYTNSIVPYPAQSPLTVESLH 358
Query: 229 GTGSG---------------------------GQIEGPPGANLFIYHIPQEFGDQELGNA 261
+ +G Q EGP G NLFIYH+PQEFGD EL
Sbjct: 359 PSFTGVQQYSAIYPTATLTPVTHSTPQPPPILQQREGPEGCNLFIYHLPQEFGDNELTQM 418
Query: 262 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 321
F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 419 FLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPK 478
Query: 322 KQNKPY 327
+PY
Sbjct: 479 DTTQPY 484
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 53 IPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E R+
Sbjct: 113 LPGMARPIQVKPADSESRGGDRK 135
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 301
LF+ IP+ +++L F+ FG++ V D+ TG+ K F++Y + SA A A
Sbjct: 47 KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTA 106
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNK 325
+ L G +Q+K + +++
Sbjct: 107 LHEQKTLPGMARPIQVKPADSESR 130
>gi|147902406|ref|NP_001090639.1| CUGBP Elav-like family member 5 [Xenopus (Silurana) tropicalis]
gi|152013396|sp|A0JM51.1|CELF5_XENTR RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|117558445|gb|AAI25740.1| brunol5 protein [Xenopus (Silurana) tropicalis]
Length = 486
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 186/367 (50%), Gaps = 61/367 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE EV+++F +G+I++ +LRG +SKGCAF+K+ + +A AA++A++G
Sbjct: 141 MLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q PSL ALP+ PY+ Y
Sbjct: 201 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIF------TPSL--ALPIS---PYSAY- 248
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + G + + P V + ++ N P P SG
Sbjct: 249 -----AQALMQQQTTVLSTSHGSY-LSPSVAFPSCHIQQIGAVNLNGLPAAPITPASGLH 302
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNNS-PGSVSPAVANSNPSTSSSG 228
G AVPGL P+ P+P H L+ S+ P A S T S
Sbjct: 303 SPPVIGTAAVPGLVAPLTNGFPGLVPFPSS---HPALDTIYTNSIVPYPAQSPALTVESL 359
Query: 229 GTGSGG----------------------------QIEGPPGANLFIYHIPQEFGDQELGN 260
G Q EGP G NLFIYH+PQEFGD EL
Sbjct: 360 HPSFTGVQQYSAIYPTAALTPVTHSTPQPPPILQQREGPEGCNLFIYHLPQEFGDNELTQ 419
Query: 261 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 420 MFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRP 479
Query: 321 NKQNKPY 327
+PY
Sbjct: 480 KDTTQPY 486
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 54 IPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 113
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E R+
Sbjct: 114 LPGMARPIQVKPADSESRGGDRK 136
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 301
LF+ IP+ +++L F+ FG++ V D+ TG+ K F++Y + SA A A
Sbjct: 48 KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTA 107
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNK 325
+ L G +Q+K + +++
Sbjct: 108 LHEQKTLPGMARPIQVKPADSESR 131
>gi|432853509|ref|XP_004067742.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Oryzias
latipes]
Length = 489
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 182/345 (52%), Gaps = 44/345 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ +LRG SKGCAF+K+ +A +A+ A++G
Sbjct: 171 MLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQT 230
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q FG A P++ Y
Sbjct: 231 MPGASSSLVVKFADTDKERTIRRMQQMVGQ--------------FGIFNPAIALPFSTY- 275
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGF 179
+S ++ LMQ + M G G + P A + MGP N ++PP+
Sbjct: 276 --SSYAHALMQQQAAIMAASHG--GYLTPSVAFPATQ------IHQMGPLNINSLPPTPM 325
Query: 180 V---GSGYPA------VPGLQYPMPYPGGMLGHRPLNNSPGSVS------PAVANSNPST 224
G PA VP + P+ + H+P N P + P + +P+
Sbjct: 326 TPVSGDSPPANITTSAVPSIVTPIVNGFTGIPHQP-NGHPAVETVYTNGLPPYSTQSPNA 384
Query: 225 SSSGGTGSGG--QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
+ + G Q GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT S
Sbjct: 385 ADTLQQAFTGVQQYTGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQS 444
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
KCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 445 KCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 489
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E A+ A A++ +
Sbjct: 84 IPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKT 143
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 144 LPGMTRPIQVKPADSESRGEDRK 166
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 290
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 69 GAMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 128
Query: 291 ESPASAQNAI 300
ES AQNA+
Sbjct: 129 ESAIKAQNAL 138
>gi|13537210|dbj|BAB40781.1| HrETR-1 [Halocynthia roretzi]
Length = 594
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 191/404 (47%), Gaps = 83/404 (20%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E ++ LF +G I++ ILR SKGC+F+K T A AA++A++G
Sbjct: 197 MLGKRQTEEDIRQLFEKFGHIEECTILRTPDGQSKGCSFVKLSTSTGARAAIDALHGSQT 256
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ--------------ANNLPNADSQHPSLF- 105
M G+S +VVK ADT+KER R+ Q+ + LP +QHP +
Sbjct: 257 MPGASSSIVVKLADTDKERAIRKMQQMAQNYGLVSPVTLQLGPYGSPLPQM-AQHPVMAT 315
Query: 106 --GALPM--GYAP-------------------------PYNGYGYQASG----------S 126
G +P G++P NG+G Q +G S
Sbjct: 316 TPGVMPAAAGWSPLATAFGTATQLGQMTNLGPASAIMQATNGHGAQIAGIPSTPQSPVAS 375
Query: 127 YGLMQYRLPPMQNQ---------------PGFHGIIPPVNQGNAMRGASPDLSSNMGPRN 171
+ PPM +Q PG P V ++M +P L+ + G +
Sbjct: 376 ITTLNLVQPPMASQSGMTTPQEIYPLQAYPGTRLAAPVVTTTHSM---TPSLAVHNGSSS 432
Query: 172 YAMPPSGFVGSGYPAVPGLQ---YPMPY-----PGGMLGHRPLNNSPGSVSPAVANSNPS 223
P + P + +Q YP PY P G P +P ++P
Sbjct: 433 DPSPMTLCASQTPPTMEMIQAPAYPQPYTVVYVPPGQYAPVPQQLTPTHLTPITTTQGAP 492
Query: 224 TSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 283
+ T Q EGP G NLFIYH+PQEF D +L N FQ FG V+SAKVF+D+AT SK
Sbjct: 493 ALVNSPTAP--QKEGPEGCNLFIYHLPQEFTDADLANVFQPFGNVISAKVFIDRATNQSK 550
Query: 284 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
CFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +Q++PY
Sbjct: 551 CFGFVSYDNPVSAQTAIQTMNGFQIGMKRLKVQLKRPKEQSRPY 594
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN +E E+ +F YG I +L +L KGCAFL Y K A+ A ++ +
Sbjct: 110 VPKNWTEHELRPIFEPYGEIYELSVLHDKYTGMHKGCAFLTYCKKTPAINAQNFLHEQKT 169
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK ADT + + R+
Sbjct: 170 LPGMNHPMQVKPADTVNKGEDRK 192
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
LFI +P+ + + EL F+ +G + V DK TG+ K F++Y A NA
Sbjct: 102 AVKLFIGQVPKNWTEHELRPIFEPYGEIYELSVLHDKYTGMHKGCAFLTYCKKTPAINAQ 161
Query: 301 AMMNGCQ-LGGKKLKVQLKRDNKQNK 325
++ + L G +Q+K + NK
Sbjct: 162 NFLHEQKTLPGMNHPMQVKPADTVNK 187
>gi|431922279|gb|ELK19370.1| CUG-BP- and ETR-3-like factor 5 [Pteropus alecto]
Length = 377
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 180/346 (52%), Gaps = 47/346 (13%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 60 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 119
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 120 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 167
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 168 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 220
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 221 SPPLLSTAAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 277
Query: 222 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
P+ S Q GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT
Sbjct: 278 PAFSGVQ------QYTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQ 331
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 332 SKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPRDPGHPY 377
>gi|170584368|ref|XP_001896973.1| RNA binding protein [Brugia malayi]
gi|158595662|gb|EDP34201.1| RNA binding protein, putative [Brugia malayi]
Length = 489
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 187/378 (49%), Gaps = 65/378 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +LF+ +G I ++ +LRG+ SKGCAF+K+ T QA A+ A++G
Sbjct: 126 MLSKQHNEDDVRSLFAPFGVIDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQT 185
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGA------------- 107
M G+S LVVK+ADTEKERQ RR Q+ +Q L ++
Sbjct: 186 MPGASSSLVVKFADTEKERQLRRMQQMAAQMGLLNPVLVNQAGVYNTAYQQLLQQQATLV 245
Query: 108 ---------LPMGYAPPYNGYGYQASGSYG----LMQYRLPPMQNQPGFHGIIPPVNQGN 154
P+ AP +G+ L Q+ L P+ P + Q N
Sbjct: 246 AAQTAAAAYFPVAMAPQTALTAAGLAGTTNPATFLTQHPLQPLSALP--------LQQAN 297
Query: 155 AMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-------AVPGLQYPMP----YPGGMLGH 203
+++ S LS P +YA + V P AV Y +P P G +
Sbjct: 298 SVQAISA-LSQPYAPVDYAAAAAASVTQYAPSSTAAAVAVDSTAYTLPASGTLPAGTIST 356
Query: 204 RPLNNSPGSVSPAVA---NSNPSTSSSGGT-----------GSGGQIEGPPGANLFIYHI 249
L P + +P V+ +NP + G+ ++ GP G NLFIYH+
Sbjct: 357 VTL---PSAYNPLVSLEQQANPYNQALQQAIALQQAAILFPGAQKEVLGPEGCNLFIYHL 413
Query: 250 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 309
PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVSY++ ASA AI MNG Q+G
Sbjct: 414 PQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFVSYDNTASAMAAIQAMNGFQIG 473
Query: 310 GKKLKVQLKRDNKQNKPY 327
K+LKVQLKR ++KPY
Sbjct: 474 MKRLKVQLKR--PRDKPY 489
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I + IL+ KGCAFL Y ++ A+ A++ +
Sbjct: 33 IPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRCQAALHDQKT 92
Query: 61 MEGSSVPLVVKWADTE 76
+ G + + VK AD E
Sbjct: 93 LPGMNRAMQVKPADNE 108
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 219 NSNPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 277
N + S S T S G ++ LF+ IP+ +++L + F+ FG++ + DK
Sbjct: 2 NGDSMMSRSSSTDSNGFPVKDADTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDK 61
Query: 278 ATGVSKCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 326
TG+ K F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 62 YTGLHKGCAFLTYCHRDSAVRCQAALHDQKTLPGMNRAMQVKPADNESRP 111
>gi|226503733|ref|NP_001142011.1| uncharacterized protein LOC100274164 [Zea mays]
gi|194706784|gb|ACF87476.1| unknown [Zea mays]
Length = 212
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 134/188 (71%), Gaps = 5/188 (2%)
Query: 100 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR-LPPMQNQPGFHGIIPPVNQGNAMRG 158
Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QNQ F ++ PVNQG+++ G
Sbjct: 8 QQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQNQAAFQNMVQPVNQGSSIHG 67
Query: 159 ASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVA 218
A+ ++S N PR++ S +GS Y +PGLQYP YPGG + HRP ++S S
Sbjct: 68 ANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGGPINHRPFSSSHSSTK-VQN 123
Query: 219 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 278
+S S SSS + G QIEGPPGANLFIYHIPQEFGD +L +AF +FGRVLSAKVFVDKA
Sbjct: 124 SSANSPSSSPSSNPGPQIEGPPGANLFIYHIPQEFGDHDLASAFHSFGRVLSAKVFVDKA 183
Query: 279 TGVSKCFG 286
TGVSKCFG
Sbjct: 184 TGVSKCFG 191
>gi|348526888|ref|XP_003450951.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2
[Oreochromis niloticus]
Length = 405
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 179/336 (53%), Gaps = 40/336 (11%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K S+ +V LF +G+I + +LRG TSKGCAF+K++ +A AA+ +++G
Sbjct: 101 MLGKQQSDEDVRRLFEPFGSIDECTVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADTEKER RR Q+ SQ +F + + + P YN Y
Sbjct: 161 MPGASSSLVVKFADTEKERGLRRMQQVASQLG-----------IFSPMTLNF-PAYNAY- 207
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVN----QGNAMRGASPDLSSNMGPR--NYAM 174
+ L+Q + + Q + + V Q A A+ +++ + P + A
Sbjct: 208 -----TQALVQQQ--ALVAQSAYLSPVATVAAVQMQQMAALNANGIIATPITPITPSSAQ 260
Query: 175 PPSGFVGSGYPAVPGLQ-YPMPYPG--GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 231
P+ + A G+Q Y YP G++G +P P V+
Sbjct: 261 SPAAALDPLQQAYAGMQHYTAAYPAAYGLVG-QPFPQQPTLVAQQHQQPQQQQQR----- 314
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS++
Sbjct: 315 -----EGPEGCNIFIYHLPQEFSDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFD 369
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 370 NPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 405
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSEGRGEDRK 96
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQ+A
Sbjct: 8 KLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 300 I 300
+
Sbjct: 68 L 68
>gi|66269431|gb|AAY43160.1| napor protein long isoform [Danio rerio]
Length = 493
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 186/354 (52%), Gaps = 33/354 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 146 MVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY---N 117
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ S SL G G P Y
Sbjct: 206 MEGCSSPMVVKFADTQKDKEQRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLAVR 263
Query: 118 GYGYQAS--GSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP 175
G+ + A+ S L G + Q A G++ + S+ MG
Sbjct: 264 GHTHAATPTSSTANAAAALLQQATSSSNLGAFSGIQQMAA--GSTANSSAAMGSLGSLGT 321
Query: 176 PSGFVGS-----GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPA-------------V 217
G G+ A+ G M G LG L+N GS P
Sbjct: 322 LQGLAGATVGLNNINALAGSVNSMAALNGGLGSTGLSN--GSAGPMDALTQAYSGIQQYA 379
Query: 218 ANSNPSTSSSG----GTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 273
A + P+ S + +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKV
Sbjct: 380 AAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKV 439
Query: 274 FVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
F+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 440 FIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 493
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 55 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 114
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 115 KTLTGMHHPIQMKPADSEK 133
>gi|348586640|ref|XP_003479076.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Cavia
porcellus]
gi|410968368|ref|XP_003990679.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Felis catus]
Length = 413
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 167/328 (50%), Gaps = 16/328 (4%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 212
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
Q + L PM Q A A+ +++ + P + A P+ V
Sbjct: 213 QQQAALVAAHSAYLSPMATMAAVQ------MQHMAAINANGLIATPITPSS-AQSPAAPV 265
Query: 181 GSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
A G+Q Y YP P P ++ P Q EGP
Sbjct: 266 DPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQREGP 325
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ A
Sbjct: 326 DGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAA 385
Query: 300 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
I MNG Q+G K+LKVQLKR N+PY
Sbjct: 386 IQAMNGFQIGMKRLKVQLKRPKDANRPY 413
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|348549848|ref|XP_003460745.1| PREDICTED: CUGBP Elav-like family member 5-like [Cavia porcellus]
Length = 424
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 186/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 79 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 138
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL ALP PY+ Y
Sbjct: 139 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--ALPFS---PYSAY- 186
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 187 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPVAPASGLH 239
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 240 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 296
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 297 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQRQREGPEGCNLFIYHLPQEFGDMELT 356
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 357 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 416
Query: 320 DNKQNKPY 327
PY
Sbjct: 417 PKDLGHPY 424
>gi|354488715|ref|XP_003506512.1| PREDICTED: CUGBP Elav-like family member 5-like [Cricetulus
griseus]
Length = 569
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/373 (38%), Positives = 183/373 (49%), Gaps = 74/373 (19%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 225 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 284
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT++ER RR Q+ Q L PSL LP PY+ Y
Sbjct: 285 MPGASSSLVVKFADTDRERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 332
Query: 121 YQASGSYGLMQYRLPPMQNQ-----PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP 175
+ LMQ + + PG PP + GA +S N P P
Sbjct: 333 -----AQALMQQQTTVLSTSGSYLSPGV--AFPPCHIQQI--GA---VSLNGLPATPITP 380
Query: 176 PSGFVGS---GYPAVPGLQYPMP--YPGGMLGHRPLNNSPGSVSPAVAN-------SNPS 223
SG G AVPGL P+P +PG + P S ++ A AN +P+
Sbjct: 381 ASGLHSPPLLGTAAVPGLVAPIPNAFPGVL----PFPGSHPALETAYANGLVPYPAQSPT 436
Query: 224 TSSSGGTGSGG-----------------------------QIEGPPGANLFIYHIPQEFG 254
+ S G Q EGP G NLFIYH+PQEFG
Sbjct: 437 VAESLHPAFSGVQQYTAMYPTAAIAPVAHCVPQPPHLLQQQREGPEGCNLFIYHLPQEFG 496
Query: 255 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 314
D EL F FG ++S+KVF+D+AT SKCFGFVS++ PASAQ AI MNG Q+G K+LK
Sbjct: 497 DTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDHPASAQAAIQAMNGFQIGMKRLK 556
Query: 315 VQLKRDNKQNKPY 327
VQLKR PY
Sbjct: 557 VQLKRPKDPGHPY 569
>gi|350580719|ref|XP_003123087.3| PREDICTED: CUGBP, Elav-like family member 5 [Sus scrofa]
Length = 444
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 185/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 99 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 158
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 159 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAY- 206
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 207 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 259
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 260 SPPLLGTAAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 316
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 317 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 376
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 377 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 436
Query: 320 DNKQNKPY 327
PY
Sbjct: 437 PKDPGHPY 444
>gi|432908655|ref|XP_004077968.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 457
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 189/380 (49%), Gaps = 76/380 (20%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V LF +GTI + +LRG TSKGCAF+K++ +A AA+ +++G
Sbjct: 101 MLGKQQTDEDVRRLFEPFGTIDECTVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADTEKER RR Q+ SQ +F + + + P YN Y
Sbjct: 161 MPGASSSLVVKFADTEKERGLRRMQQVASQLG-----------IFSPMTLNF-PAYNAYT 208
Query: 121 YQASGSYGLMQYR--------LPP--------MQNQPGFH--GIIPPVNQGNAMRGASPD 162
+ L+Q++ L P MQ + GII + +P
Sbjct: 209 QAVNAQ--LVQHQALVAQSAYLSPVATVAAVQMQQMAALNANGII-----ATPITPITPS 261
Query: 163 LSSNMGPRNYAMP------PSGFVGSGYPAVP----GLQYPMPYPGGMLGHRPLNNSPGS 212
+N P A P P G +GY +VP G Q Y G+ H+ SP +
Sbjct: 262 SGTNTPPAIAATPVPALPPPIGM--NGYSSVPAPTNGQQTETLYTNGV--HQYQAQSPAA 317
Query: 213 VSP---AVANSNPSTSSS-GGTGSGGQ---------------------IEGPPGANLFIY 247
+ P A A T++ G GQ EGP G N+FIY
Sbjct: 318 LDPLQQAYAGMQHYTAAYPAAYGLVGQPFPQQQTLVAQQHQQPQQQQQREGPEGCNIFIY 377
Query: 248 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 307
H+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q
Sbjct: 378 HLPQEFSDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQ 437
Query: 308 LGGKKLKVQLKRDNKQNKPY 327
+G K+LKVQLKR N+PY
Sbjct: 438 IGMKRLKVQLKRPKDANRPY 457
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSEGRGEDRK 96
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQ+A
Sbjct: 8 KLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 300 I 300
+
Sbjct: 68 L 68
>gi|410928558|ref|XP_003977667.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 435
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 178/360 (49%), Gaps = 68/360 (18%)
Query: 7 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 66
S+ +V LF +G+I + +LRG TSKGCAF+K++ +A AA+ +++G M G+S
Sbjct: 105 SDEDVRRLFEPFGSIDECTVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASS 164
Query: 67 PLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGS 126
LVVK+ADTEKER RR Q+ SQ +FG + + + P YN Y QA +
Sbjct: 165 SLVVKFADTEKERGLRRMQQVASQLG-----------IFGPMTLNF-PAYNAYT-QAVNA 211
Query: 127 YGLMQYRLPP---------------MQNQPGFH--GIIPPVNQGNAMRGASPDLSSNMGP 169
+ Q L MQ + GII + +P +N P
Sbjct: 212 QLVQQQALVAQSAYLSPVATVAAVQMQQMAALNANGII-----ATPITPITPSSGTNTPP 266
Query: 170 RNYAMPPSGFVG----SGYPAVP----GLQ------------YPMPYPG--GMLGHRPLN 207
A P S +GY ++P G Q Y YP G++G +P
Sbjct: 267 AIAATPVSAISAPIGVNGYSSLPAPTNGQQATEALYTNGVHPYQAAYPAAYGLVG-QPFP 325
Query: 208 NSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGR 267
P V+ EGP G N+FIYH+PQEF D EL F FG
Sbjct: 326 QQPTLVAQQHQQPQQQQQR----------EGPEGCNIFIYHLPQEFSDSELLQMFLPFGN 375
Query: 268 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 376 VISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 435
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G VV + +E
Sbjct: 74 LPGLVYSGVVASSSSE 89
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQ+A+
Sbjct: 9 LFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSAL 68
>gi|189241911|ref|XP_971057.2| PREDICTED: similar to bruno-3 CG12478-PA [Tribolium castaneum]
Length = 569
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 183/369 (49%), Gaps = 60/369 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF+ +GTI++ ILRG SKGCAF+KY + ++A AA+ +++G
Sbjct: 219 MLSKQQTEEDVRQLFAPFGTIEECTILRGPDGASKGCAFVKYSSHQEAQAAINSLHGSQT 278
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADTEKE R+ ++ Q A N +P +F + YG
Sbjct: 279 MPGASSSLVVKFADTEKE---RQLRRMQQMAG---NMSLLNPFVFNQ--------FGAYG 324
Query: 121 YQASGSYGLMQYR------------LPPMQNQPGFHGIIPPVN---QGNAMRGASPDLSS 165
A S Q + PM IP G + GA P L S
Sbjct: 325 AYAQHSLDFQQQAALMAAATAQGTYINPMA---ALATQIPHATLNGSGQPVNGAIPSLPS 381
Query: 166 NMGP--RNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML-----------GHRPLNNS--- 209
P A P+G G G AV P YP L G L ++
Sbjct: 382 PTMPTFNMAAQTPNGQPG-GTEAVYTNGIPQTYPAHALHLSIPAQGLPNGEAALQHAAYP 440
Query: 210 -----PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQEL 258
PG PAV A P ++ + G I GP G NLFIYH+PQEFGD EL
Sbjct: 441 GMQPYPGVAYPAVYGQFPQAIPQPMSAVAPAQREGCSISGPEGCNLFIYHLPQEFGDAEL 500
Query: 259 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 318
F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLK
Sbjct: 501 MQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLK 560
Query: 319 RDNKQNKPY 327
R N+PY
Sbjct: 561 RPKDANRPY 569
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I + +L+ KGCAFL Y + E AL A A++ KH
Sbjct: 131 IPRHLEEDDLRPMFEEFGKIYEFTVLKDKYTGMHKGCAFLTYFSPESALNAQNALHEKHT 190
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 191 LPGMNRPIQVKPADSE 206
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 302
LF+ IP+ + +L F+ FG++ V DK TG+ K F++Y SP SA NA A+
Sbjct: 126 LFVGQIPRHLEEDDLRPMFEEFGKIYEFTVLKDKYTGMHKGCAFLTYFSPESALNAQNAL 185
Query: 303 MNGCQLGGKKLKVQLKRDNKQNK 325
L G +Q+K + +N+
Sbjct: 186 HEKHTLPGMNRPIQVKPADSENR 208
>gi|440912153|gb|ELR61745.1| CUGBP Elav-like family member 5, partial [Bos grunniens mutus]
Length = 398
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 185/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 53 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 112
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 113 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 160
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 161 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 213
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 214 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 270
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 271 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 330
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 331 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 390
Query: 320 DNKQNKPY 327
PY
Sbjct: 391 PKDPGHPY 398
>gi|350583383|ref|XP_003481500.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Sus scrofa]
gi|397492760|ref|XP_003817288.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Pan paniscus]
gi|426331465|ref|XP_004026701.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gorilla
gorilla gorilla]
Length = 414
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 166/329 (50%), Gaps = 17/329 (5%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 212
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
Q + L PM Q A A+ +++ + P + A P+ V
Sbjct: 213 QQQAALVAAHSAYLSPMATMAAVQ------MQHMAAINANGLIATPITPSS-AQSPAAPV 265
Query: 181 GSGYPAVPGLQ-YPMPYPGGMLGHRP-LNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
A G+Q Y YP P P V+ Q EG
Sbjct: 266 DPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQREG 325
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 326 PDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQA 385
Query: 299 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 386 AIQAMNGFQIGMKRLKVQLKRPKDANRPY 414
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|395831373|ref|XP_003788777.1| PREDICTED: CUGBP Elav-like family member 5 [Otolemur garnettii]
Length = 485
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 185/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 140 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 200 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 247
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 248 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 300
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 301 SPPLLGTAAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 357
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 358 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 417
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 418 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 477
Query: 320 DNKQNKPY 327
PY
Sbjct: 478 PKDPGHPY 485
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 52 IPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 111
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 112 LPGMARPIQVKPADSE 127
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 301
LF+ IP+ +++L F+ FGR+ V D TG+ K F++Y + SA A A
Sbjct: 46 KLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTA 105
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNK 325
+ L G +Q+K + +++
Sbjct: 106 LHEQKTLPGMARPIQVKPADSESR 129
>gi|359322160|ref|XP_854891.3| PREDICTED: CUGBP, Elav-like family member 5 [Canis lupus
familiaris]
Length = 485
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 185/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 140 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 200 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 247
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 248 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 300
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 301 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 357
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 358 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 417
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 418 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 477
Query: 320 DNKQNKPY 327
PY
Sbjct: 478 PKDPGHPY 485
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 52 IPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 111
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 112 LPGMARPIQVKPADSE 127
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 226 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 283 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>gi|410033642|ref|XP_524868.3| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Pan
troglodytes]
Length = 414
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 166/329 (50%), Gaps = 17/329 (5%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 212
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
Q + L PM Q A A+ +++ + P + A P+ V
Sbjct: 213 QQQAALEAAHSAYLSPMATMAAVQ------MQHMAAINANGLIATPITPSS-AQSPAAPV 265
Query: 181 GSGYPAVPGLQ-YPMPYPGGMLGHRP-LNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
A G+Q Y YP P P V+ Q EG
Sbjct: 266 DPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQREG 325
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 326 PDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQA 385
Query: 299 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 386 AIQAMNGFQIGMKRLKVQLKRPKDANRPY 414
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|344248420|gb|EGW04524.1| CUG-BP- and ETR-3-like factor 6 [Cricetulus griseus]
Length = 321
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 175/341 (51%), Gaps = 34/341 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 1 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 61 MSGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPT---PLPLGACGAY---- 107
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG G + V A +++ + P P
Sbjct: 108 ---TTAILQHQAALLAAAQGPGL-GQVAAVAAQMQHVAAFSLVAAPLLPTAANTSPG--- 160
Query: 181 GSGYPAVPGLQYPM---------PYPGGMLGHRPLNNS-----PGSVSPAVANSNPSTSS 226
GSG A+PGL PM P G G L N+ P + A A + + S
Sbjct: 161 GSGPGALPGLPAPMGVNGFGSLTPQTNGQPGSDTLYNNGLSPYPAAYPSAYAPVSTAFSQ 220
Query: 227 SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFG
Sbjct: 221 QPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFG 280
Query: 287 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
FVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 281 FVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 321
>gi|395535953|ref|XP_003769985.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Sarcophilus
harrisii]
Length = 408
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 168/328 (51%), Gaps = 21/328 (6%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 212
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
Q + L PM Q A A+ +++ + P + A P+ V
Sbjct: 213 QQQAALVAAHSAYLNPMATMAAVQ------MQHMAAINANGLIATPITPSS-AQSPAAPV 265
Query: 181 GSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
A G+Q Y YP P P PA+ P + EGP
Sbjct: 266 DPLQQAYAGMQHYTAAYPAAYSLVTPAFPQP----PALVTQQPPPPPQQQQQQQQR-EGP 320
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ A
Sbjct: 321 DGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAA 380
Query: 300 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
I MNG Q+G K+LKVQLKR N+PY
Sbjct: 381 IQAMNGFQIGMKRLKVQLKRPKDANRPY 408
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSENRGEDRK 96
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|281337967|gb|EFB13551.1| hypothetical protein PANDA_012783 [Ailuropoda melanoleuca]
Length = 462
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 184/365 (50%), Gaps = 60/365 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 120 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 179
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 180 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 227
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 228 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 280
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 281 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 337
Query: 222 PSTSSS---GGTGS----------------GGQIEGPPGANLFIYHIPQEFGDQELGNAF 262
P+ S GTG+ G P G NLFIYH+PQEFGD EL F
Sbjct: 338 PAFSGVQQYTGTGAVRPSLGRGPAPRPRLPGVATPRPEGCNLFIYHLPQEFGDTELTQMF 397
Query: 263 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 322
FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 398 LPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKD 457
Query: 323 QNKPY 327
PY
Sbjct: 458 PGHPY 462
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 32 IPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 91
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 92 LPGMARPIQVKPADSE 107
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 226 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 6 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 65
Query: 283 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 66 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 109
>gi|426386618|ref|XP_004059780.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Gorilla
gorilla gorilla]
Length = 370
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 185/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 25 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 85 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 132
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 133 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 185
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 186 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 242
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 243 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 302
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 303 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 362
Query: 320 DNKQNKPY 327
PY
Sbjct: 363 PKDPGHPY 370
>gi|24762232|ref|NP_068757.2| CUGBP Elav-like family member 5 isoform 1 [Homo sapiens]
gi|402903694|ref|XP_003914695.1| PREDICTED: CUGBP Elav-like family member 5 [Papio anubis]
gi|74762534|sp|Q8N6W0.1|CELF5_HUMAN RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|20380221|gb|AAH28101.1| Bruno-like 5, RNA binding protein (Drosophila) [Homo sapiens]
gi|119589733|gb|EAW69327.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|119589734|gb|EAW69328.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|123981490|gb|ABM82574.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
gi|123996323|gb|ABM85763.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
Length = 485
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 185/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 140 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 200 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 247
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 248 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 300
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 301 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 357
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 358 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 417
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 418 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 477
Query: 320 DNKQNKPY 327
PY
Sbjct: 478 PKDPGHPY 485
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 52 IPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 111
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 112 LPGMARPIQVKPADSE 127
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 226 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 283 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>gi|390468527|ref|XP_003733960.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Callithrix
jacchus]
Length = 454
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 173/339 (51%), Gaps = 36/339 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACSAY---- 246
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG + Q + S + + PP
Sbjct: 247 ---TTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP---- 299
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ- 235
GSG +PGL P P G+ G PL N PGS + +P + S G Q
Sbjct: 300 GSGPGTLPGL----PTPIGINGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQ 355
Query: 236 -------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 288
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFV
Sbjct: 356 AYAGMHHYAGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 415
Query: 289 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FG + V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|426331471|ref|XP_004026704.1| PREDICTED: CUGBP Elav-like family member 3-like [Gorilla gorilla
gorilla]
Length = 348
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 168/335 (50%), Gaps = 19/335 (5%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 25 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 85 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 136
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP--- 175
Q + L PM N + +P ++ P A P
Sbjct: 137 QQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSA 196
Query: 176 -PSGFVGSGYPAVPGLQYPMPYPGGML--GHRPLNNSPGSVSPAVANSNPSTSSSGGTGS 232
P+ +GY VP P P + G P + + VA P+
Sbjct: 197 IPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAAYPAAYSLVA---PAFPQPPALQQ 253
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
Q EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++
Sbjct: 254 QQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDN 313
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 314 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 348
>gi|338725075|ref|XP_003365078.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Equus
caballus]
gi|426331469|ref|XP_004026703.1| PREDICTED: CUGBP Elav-like family member 3 isoform 4 [Gorilla
gorilla gorilla]
gi|355758212|gb|EHH61449.1| hypothetical protein EGM_19912 [Macaca fascicularis]
Length = 419
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 167/338 (49%), Gaps = 30/338 (8%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 212
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP--- 175
Q + L PM N + +P ++ P A P
Sbjct: 213 QQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSA 272
Query: 176 -PSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANS-----NPSTSSSGG 229
P+ +GY VP P P + P V P A S +P + G
Sbjct: 273 IPAALGVNGYSPVPTQPTGQPAPDALY--------PNGVHPYPAQSPAAPVDPLQQAYAG 324
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS
Sbjct: 325 MQ---HYTGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVS 381
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 382 FDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 419
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|410052930|ref|XP_003953367.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Pan troglodytes]
Length = 484
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 185/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 139 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 198
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 199 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAY- 246
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 247 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 299
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 300 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 356
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 357 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 416
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 417 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 476
Query: 320 DNKQNKPY 327
PY
Sbjct: 477 PKDPGHPY 484
>gi|334324674|ref|XP_003340553.1| PREDICTED: CUGBP, Elav-like family member 3 [Monodelphis domestica]
Length = 408
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 168/328 (51%), Gaps = 21/328 (6%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 212
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
Q + L PM Q A A+ +++ + P + A P+ V
Sbjct: 213 QQQAALVAAHSAYLNPMATMAAVQ------MQHMAAINANGLIATPITPSS-AQSPAAPV 265
Query: 181 GSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
A G+Q Y YP P P PA+ P + EGP
Sbjct: 266 DPLQQAYAGMQHYTAAYPAAYSLVTPAFPQP----PALVAQQPPPPPQQQQQQQQR-EGP 320
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ A
Sbjct: 321 DGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAA 380
Query: 300 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
I MNG Q+G K+LKVQLKR N+PY
Sbjct: 381 IQAMNGFQIGMKRLKVQLKRPKDANRPY 408
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSENRGEDRK 96
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|390478372|ref|XP_002761622.2| PREDICTED: CUGBP Elav-like family member 5 [Callithrix jacchus]
Length = 383
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 178/369 (48%), Gaps = 64/369 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 37 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 96
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 97 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 144
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 145 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 197
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANSNP 222
G AVPGL P+ P+PGG H L + G V SP VA
Sbjct: 198 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVARDTD 254
Query: 223 ------------------------STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQEL 258
S Q EGP G NLFIYH+PQEFGD EL
Sbjct: 255 ILPSPRVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTEL 314
Query: 259 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 318
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLK
Sbjct: 315 TQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLK 374
Query: 319 RDNKQNKPY 327
R PY
Sbjct: 375 RPKDPGHPY 383
>gi|326934283|ref|XP_003213221.1| PREDICTED: CUGBP Elav-like family member 5-like [Meleagris
gallopavo]
Length = 379
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 177/345 (51%), Gaps = 54/345 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G
Sbjct: 71 MLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQT 130
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q PSL LP PY+ Y
Sbjct: 131 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFT------PSL--TLPFS---PYSAY- 178
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + G + ++ G A SP +G +
Sbjct: 179 -----AQALMQQQTTVLSTSHGSY-----LSPGVAF---SPCHIQQIGAVSL-------- 217
Query: 181 GSGYPAVPGLQY------PMPYPGGMLGHRPLNNSPGS---VSPAVANSNPSTSSS---- 227
+G PA P Q P G G + + PG+ +SP + P+TS +
Sbjct: 218 -NGLPAAPIAQTSGEGTDSAPLSSGRPGFK--VSPPGARFVLSPWITAVYPTTSITPIAQ 274
Query: 228 -----GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
Q EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT S
Sbjct: 275 SIPQPPPVLQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQS 334
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
KCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR N PY
Sbjct: 335 KCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY 379
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ L ++ + S+GCAFL Y ++ A+ A A++ + + G + P+ VK AD+E
Sbjct: 5 ESLTLVMSTWNLSQGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGD 64
Query: 82 RR 83
R+
Sbjct: 65 RK 66
>gi|403276016|ref|XP_003929713.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 181/346 (52%), Gaps = 45/346 (13%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 25 MLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 85 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACSAY---- 131
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG G + V A +++ + P PP
Sbjct: 132 ---TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAAFSLVAAPLLPAAANSPP---- 183
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS-------VSPAVANSNPSTSSSGG 229
GSG +PGL P P G+ G PL N PGS +SP A + PS +
Sbjct: 184 GSGPGTLPGL----PAPIGINGFGPLTPQTNGQPGSDTLYNNGLSPYPA-AYPSAYAPVS 238
Query: 230 TGSGGQ--------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
T Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT
Sbjct: 239 TAFAQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQ 298
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 299 SKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
>gi|359321741|ref|XP_003639690.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Canis
lupus familiaris]
Length = 412
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 168/328 (51%), Gaps = 17/328 (5%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 212
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
Q + L PM Q A A+ +++ + P + A P+ V
Sbjct: 213 QQQAALVAAHSAYLSPMATMAAVQ------MQHMAAINANGLIATPITPSS-AQSPAAPV 265
Query: 181 GSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
A G+Q Y YP P P ++ A P Q EGP
Sbjct: 266 DPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALV-AQQPPPPPQQQQQQQQQQQQREGP 324
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ A
Sbjct: 325 DGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAA 384
Query: 300 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
I MNG Q+G K+LKVQLKR N+PY
Sbjct: 385 IQAMNGFQIGMKRLKVQLKRPKDANRPY 412
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|606976|gb|AAA81375.1| ribonucleoprotein [Xenopus laevis]
Length = 462
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 185/383 (48%), Gaps = 77/383 (20%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +G I + +LRG TSKGCAF+K++T +A AA+ A++G
Sbjct: 101 MLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ AN L +F + + + Y+ Y
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQV---ANQL--------GMFSPIALQFGA-YSAYT 208
Query: 121 YQASGSYGLMQYR----------LPPMQNQPGF----------HGII-PPVNQGNAMRGA 159
S LMQ + L PM +GII P+ Q N + +
Sbjct: 209 QAVSDQ--LMQQQAALVAAHSAYLNPMATMAAVQMQQMATINPNGIIATPITQINPITSS 266
Query: 160 S-----PDLSSNMGPRNYAMPPSGFVGSGYPAVP---------------GLQ-YPMPYPG 198
S P L++ + P+ +GY AVP GL YP P
Sbjct: 267 SGTSTPPTLTAT----QVSAIPATLGVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPV 322
Query: 199 GMLGHRPLNNSP--------------GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANL 244
L PL + G VSPA + EGP G N+
Sbjct: 323 AQLD--PLQQAYAGMQHYTAAYPAAYGLVSPAFTQPPAIIQQQPPQQQQQR-EGPEGCNI 379
Query: 245 FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 304
FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MN
Sbjct: 380 FIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMN 439
Query: 305 GCQLGGKKLKVQLKRDNKQNKPY 327
G Q+G K+LKVQLKR N+PY
Sbjct: 440 GFQIGMKRLKVQLKRPKDANRPY 462
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|147907254|ref|NP_001079936.1| CUGBP Elav-like family member 3-A [Xenopus laevis]
gi|152013388|sp|Q91579.2|CEL3A_XENLA RecName: Full=CUGBP Elav-like family member 3-A; Short=CELF-3A;
AltName: Full=Bruno-like protein 1-A; AltName:
Full=CUG-BP- and ETR-3-like factor 3-A; AltName:
Full=ELAV-type RNA-binding protein 1-A; Short=ETR-1-A;
AltName: Full=RNA-binding protein BRUNOL-1-A; AltName:
Full=Trinucleotide repeat-containing gene 4 protein A
gi|34785486|gb|AAH57704.1| Etr-1 protein [Xenopus laevis]
gi|47937574|gb|AAH72134.1| Etr-1 protein [Xenopus laevis]
Length = 462
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 185/383 (48%), Gaps = 77/383 (20%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +G I + +LRG TSKGCAF+K++T +A AA+ A++G
Sbjct: 101 MLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ AN L +F + + + Y+ Y
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQV---ANQL--------GMFSPIALQFGA-YSAYT 208
Query: 121 YQASGSYGLMQYR----------LPPMQNQPGF----------HGII-PPVNQGNAMRGA 159
S LMQ + L PM +GII P+ Q N + +
Sbjct: 209 QAVSDQ--LMQQQAALVAAHSAYLNPMATMAAVQMQQMATINPNGIIATPITQINPITSS 266
Query: 160 S-----PDLSSNMGPRNYAMPPSGFVGSGYPAVP---------------GLQ-YPMPYPG 198
S P L++ + P+ +GY AVP GL YP P
Sbjct: 267 SGTSTPPTLTAT----QVSAIPATLGVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPV 322
Query: 199 GMLGHRPLNNSP--------------GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANL 244
L PL + G VSPA + EGP G N+
Sbjct: 323 AQLD--PLQQAYAGMQHYTAAYPAAYGLVSPAFTQPPAILQQQPPQQQQQR-EGPEGCNI 379
Query: 245 FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 304
FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MN
Sbjct: 380 FIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMN 439
Query: 305 GCQLGGKKLKVQLKRDNKQNKPY 327
G Q+G K+LKVQLKR N+PY
Sbjct: 440 GFQIGMKRLKVQLKRPKDANRPY 462
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|397496989|ref|XP_003819302.1| PREDICTED: CUGBP Elav-like family member 5 [Pan paniscus]
Length = 433
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 185/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 88 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 147
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 148 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 195
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 196 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 248
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 249 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 305
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 306 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 365
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 366 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 425
Query: 320 DNKQNKPY 327
PY
Sbjct: 426 PKDPGHPY 433
>gi|431896648|gb|ELK06060.1| CUG-BP- and ETR-3-like factor 3 [Pteropus alecto]
Length = 419
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 167/338 (49%), Gaps = 30/338 (8%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 212
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP--- 175
Q + L PM N + +P ++ P A P
Sbjct: 213 QQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSA 272
Query: 176 -PSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANS-----NPSTSSSGG 229
P+ +GY VP P P + P V P A S +P + G
Sbjct: 273 IPAALGVNGYSPVPTQPAGQPAPDALY--------PNGVHPYPAQSPAAPVDPLQQAYAG 324
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS
Sbjct: 325 MQ---HYTGPDGCNIFIYHLPQEFTDSEVLQMFVPFGHVISAKVFVDRATNQSKCFGFVS 381
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 382 FDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 419
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|363743697|ref|XP_423569.3| PREDICTED: CUGBP Elav-like family member 5 [Gallus gallus]
Length = 404
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 178/365 (48%), Gaps = 56/365 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G
Sbjct: 58 MLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQT 117
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ------ANNLPNAD---------SQHPSLF 105
M G+S LVVK+ADT+KER RR Q+ Q + LP + Q ++
Sbjct: 118 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVL 177
Query: 106 GALPMGYAPP---YNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPD 162
Y P ++ Q G+ L P+ G H PP+ AM G
Sbjct: 178 STSHGSYLSPGVAFSPCHIQQIGAVSLNGLPAAPIAQTSGLHS--PPLLGTTAMPGLVAP 235
Query: 163 LSS---------NMGPRNYAMPPSGFV----------GSGYPAVPGL-QYPMPYPGGMLG 202
+S+ N P + +GFV + +PA G+ QY YP
Sbjct: 236 ISNGFTGVVPFPNGHPALETVYTNGFVPYSAQSPSVAETLHPAFSGVQQYAAVYPT---- 291
Query: 203 HRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 262
S++P S Q EGP G NLFIYH+PQEFGD EL F
Sbjct: 292 --------TSITPIAQ----SIPQPPPVLQQQQREGPEGCNLFIYHLPQEFGDNELMQMF 339
Query: 263 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 322
FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 340 LPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKD 399
Query: 323 QNKPY 327
N PY
Sbjct: 400 ANHPY 404
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 33 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 83
++KGCAFL Y ++ A+ A A++ + + G + P+ VK AD+E R+
Sbjct: 3 SAKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRK 53
>gi|449270204|gb|EMC80905.1| CUG-BP- and ETR-3-like factor 5, partial [Columba livia]
Length = 403
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 184/368 (50%), Gaps = 62/368 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G
Sbjct: 54 MLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQT 113
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q PSL LP PY+ Y
Sbjct: 114 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFT------PSL--TLPFS---PYSAY- 161
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + G + + P V +S N P P SG
Sbjct: 162 -----AQALMQQQTTVLSTSHGSY-LSPGVAFSPCHIQQIGAVSLNGLPAAPIAPASGLH 215
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-- 220
G A+PGL P+ P+P G H L + G V SP+VA +
Sbjct: 216 SPPLLGTAAMPGLVAPISNGFTGVIPFPNG---HPTLETVYTNGLVPYSAQSPSVAETLH 272
Query: 221 ------------NPSTSSSGGTGSGGQI---------EGPPGANLFIYHIPQEFGDQELG 259
P+T+ + S Q EGP G NLFIYH+PQEFGD EL
Sbjct: 273 PAFTGVQQYAAVYPTTTITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELM 332
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 333 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKR 392
Query: 320 DNKQNKPY 327
N PY
Sbjct: 393 PKDANHPY 400
>gi|145306686|gb|ABP57107.1| CUG-BP and ETR-3-like factor 5 [Gallus gallus]
Length = 371
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 178/365 (48%), Gaps = 56/365 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G
Sbjct: 25 MLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ------ANNLPNAD---------SQHPSLF 105
M G+S LVVK+ADT+KER RR Q+ Q + LP + Q ++
Sbjct: 85 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVL 144
Query: 106 GALPMGYAPP---YNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPD 162
Y P ++ Q G+ L P+ G H PP+ AM G
Sbjct: 145 STSHGSYLSPGVAFSPCHIQQIGAVSLNGLPAAPIAQTSGLHS--PPLLGTTAMPGLVAP 202
Query: 163 LSS---------NMGPRNYAMPPSGFV----------GSGYPAVPGL-QYPMPYPGGMLG 202
+S+ N P + +GFV + +PA G+ QY YP
Sbjct: 203 ISNGFTGVVPFPNGHPALETVYTNGFVPYSAQSPSVAETLHPAFSGVQQYAAVYPT---- 258
Query: 203 HRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAF 262
S++P S Q EGP G NLFIYH+PQEFGD EL F
Sbjct: 259 --------TSITPIAQ----SIPQPPPVLQQQQREGPEGCNLFIYHLPQEFGDNELMQMF 306
Query: 263 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 322
FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 307 LPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKD 366
Query: 323 QNKPY 327
N PY
Sbjct: 367 ANHPY 371
>gi|359067200|ref|XP_003586320.1| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 685
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 184/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 340 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 399
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 400 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 447
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 448 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 500
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G VPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 501 SPPLLGTATVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 557
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 558 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 617
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 618 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 677
Query: 320 DNKQNKPY 327
PY
Sbjct: 678 PKDPGHPY 685
>gi|158253638|gb|AAI54064.1| tnrc4 protein [Xenopus (Silurana) tropicalis]
Length = 462
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 186/382 (48%), Gaps = 75/382 (19%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +G I + +LRG TSKGCAF+K++T +A AA+ A++G
Sbjct: 101 MLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ AN L +F + + + Y+ Y
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQV---ANQL--------GMFSPIALQFGA-YSAYT 208
Query: 121 YQASGSYGLMQYR----------LPPMQNQPGF----------HGII-PPVNQGNAMRGA 159
S LMQ + L PM +GII P+ N + +
Sbjct: 209 QAVSDQ--LMQQQAALVAAHSAYLNPMATMAAVQMQQMATINPNGIIATPITPINPITSS 266
Query: 160 SPDLSSNMGPRNYAMPPSGFVGS----GYPAVP---------------GLQ-YPMPYPGG 199
S ++ P A P S + GY AVP GL YP P
Sbjct: 267 S---GTSTPPTLAATPVSAIPATLGVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPVA 323
Query: 200 MLGHRPLNNSP--------------GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLF 245
L PL + G VSPA + P+ Q EGP G N+F
Sbjct: 324 QLD--PLQQAYAGMQHYTAAYPAAYGLVSPAFTQA-PAILPQQPPQQQQQREGPEGCNIF 380
Query: 246 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 305
IYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG
Sbjct: 381 IYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNG 440
Query: 306 CQLGGKKLKVQLKRDNKQNKPY 327
Q+G K+LKVQLKR N+PY
Sbjct: 441 FQIGMKRLKVQLKRPKDANRPY 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|332844222|ref|XP_003314797.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Pan
troglodytes]
Length = 345
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 179/346 (51%), Gaps = 44/346 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 25 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ HP+ LP+G Y
Sbjct: 85 MAGASSSLVVKLADTDRERALRRMQQMAGHLGAF------HPA---PLPLGACGAYTTAI 135
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
Q G +++ + G + V A +++ + P PP
Sbjct: 136 LQHQGGLAGSRHKAQDL-------GPVGAVAAQMQHVAAFSLVAAPLLPAAANSPP---- 184
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS-------VSPAVANSNPSTSSSGG 229
GSG +PGL P P G+ G PL N PGS +SP A + PS +
Sbjct: 185 GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPA-AYPSAYAPVS 239
Query: 230 TG--------SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
T Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT
Sbjct: 240 TAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQ 299
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 300 SKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 345
>gi|410918518|ref|XP_003972732.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 474
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 180/356 (50%), Gaps = 56/356 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 146 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ + SL G G P Y
Sbjct: 206 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALL 263
Query: 121 YQASGSYGLMQY--------------------RLPPMQNQPGFHGIIPPVNQGNAMRGAS 160
QA+ S L + L + G G +N NA+ G+
Sbjct: 264 QQAASSGNLGAFSGIQQMAAGTTASSNAGAMNSLTSLGTLQGLAGATVGLNNINALAGSI 323
Query: 161 PDL---SSNMGPRNYAMPPSGFVGSGYPAVPGLQ------YPMPYPGGMLGHRPLNNSPG 211
+ + +G +G + + A G+Q P Y +L +
Sbjct: 324 NSMAALNGGLGGAGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQ------- 376
Query: 212 SVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 271
G GS Q EGP GANLFIYH+PQEFGDQ++ F FG V+SA
Sbjct: 377 ----------------GAAGS--QKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSA 418
Query: 272 KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
KVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 419 KVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 474
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 55 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 114
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 115 KTLTGMHHPIQMKPADSEK 133
>gi|395513595|ref|XP_003761008.1| PREDICTED: CUGBP Elav-like family member 5 [Sarcophilus harrisii]
Length = 429
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 186/369 (50%), Gaps = 63/369 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G
Sbjct: 82 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQT 141
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q PSL LP PY+ Y
Sbjct: 142 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFT------PSL--TLPFS---PYSAY- 189
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + G + + P V +S N P P SG
Sbjct: 190 -----AQALMQQQTTVLSTSHGSY-LSPGVAFSPCHIQQIGAVSLNGIPATPIAPASGLH 243
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP++A + +
Sbjct: 244 SPPLLGTAAVPGLVTPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPSMAETLH 300
Query: 222 PSTS----------SSGGTGSGGQI-------------EGPPGANLFIYHIPQEFGDQEL 258
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 301 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPIIQQQQQREGPEGCNLFIYHLPQEFGDSEL 360
Query: 259 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 318
F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLK
Sbjct: 361 MQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLK 420
Query: 319 RDNKQNKPY 327
R + PY
Sbjct: 421 RPKDASHPY 429
>gi|358413030|ref|XP_610805.5| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 562
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 184/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 217 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 276
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 277 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 324
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 325 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 377
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G VPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 378 SPPLLGTATVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 434
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 435 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 494
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 495 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 554
Query: 320 DNKQNKPY 327
PY
Sbjct: 555 PKDPGHPY 562
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 129 IPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 188
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 189 LPGMARPIQVKPADSE 204
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 226 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 103 SSGPEPPGGQPDGTKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 162
Query: 283 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 163 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 206
>gi|402874765|ref|XP_003901198.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Papio anubis]
Length = 454
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 173/339 (51%), Gaps = 36/339 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACGAY---- 246
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG + Q + S + + PP
Sbjct: 247 ---TTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP---- 299
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ- 235
GSG +PGL P P G+ G PL N PGS + +P + S G Q
Sbjct: 300 GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQ 355
Query: 236 -------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 288
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFV
Sbjct: 356 AYAGMHHYAGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 415
Query: 289 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|327291733|ref|XP_003230575.1| PREDICTED: CUGBP Elav-like family member 5-like, partial [Anolis
carolinensis]
Length = 365
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 176/366 (48%), Gaps = 47/366 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE ++ LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G
Sbjct: 8 MLNKQQSEEDILRLFEPFGAIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQT 67
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP--------------NADSQHPSLFG 106
M G+S LVVK+ADT+KER RR Q+ Q L A Q ++
Sbjct: 68 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSFALPFSPYGAYAQALMQQQTVLS 127
Query: 107 ALPMGYAPPYNGYG---YQASGSYGLMQYRLPPMQNQPGFH-----------GIIPPVNQ 152
A + P + Q G+ L P+ G H G++ P+
Sbjct: 128 ASHGNFVSPTLTFSPCHIQQIGTVSLNSLPSSPITQTSGLHSPSLLGSTAVPGLVAPI-- 185
Query: 153 GNAMRGASPDLSSNMGPRNYAMPPSGFVGSG----------YPAVPGLQ-YPMPYPGGML 201
N+ G P + S+ P A+ +G V +PA G+Q Y YP +
Sbjct: 186 ANSFAGVVP-IPSSHHPSLEAVYANGLVPCAAQNPSVGEALHPAFTGVQQYAAVYPATAI 244
Query: 202 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNA 261
P+ + P + EGP G NLFIYH+PQEFGD EL
Sbjct: 245 --TPVAQAIPQPLPIIQQQQQQQQQPQQQQQR---EGPEGCNLFIYHLPQEFGDNELMQM 299
Query: 262 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 321
F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 300 FLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPK 359
Query: 322 KQNKPY 327
PY
Sbjct: 360 DAGHPY 365
>gi|444515071|gb|ELV10733.1| CUGBP Elav-like family member 3 [Tupaia chinensis]
Length = 431
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 168/347 (48%), Gaps = 36/347 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ +Q Q FGA Y+
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQ----FGA----YSAYTQALM 212
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP--- 175
Q + L PM N + +P ++ P A P
Sbjct: 213 QQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSA 272
Query: 176 -PSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANS-----NPSTSSSGG 229
P+ +GY VP P P + P V P A S +P + G
Sbjct: 273 IPAALGVNGYSPVPTQPTGQPAPDALY--------PNGVHPYPAQSPAAPVDPLQQAYAG 324
Query: 230 TGSGGQIE---------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 280
E GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT
Sbjct: 325 MQHYTVTERFLCLCFHPGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATN 384
Query: 281 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 385 QSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 431
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|332236064|ref|XP_003267225.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Nomascus
leucogenys]
Length = 454
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 173/339 (51%), Gaps = 36/339 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ HP+ LP+G Y
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGHLGAF------HPA---PLPLGACGAY---- 246
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG + Q + S + + PP
Sbjct: 247 ---TTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP---- 299
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ- 235
GSG A+PGL P P G+ G PL N PGS + +P + S G Q
Sbjct: 300 GSGPGALPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQ 355
Query: 236 -------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 288
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFV
Sbjct: 356 AYAGMHHYAGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 415
Query: 289 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|432852724|ref|XP_004067353.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 3
[Oryzias latipes]
Length = 454
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 174/345 (50%), Gaps = 44/345 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ +LRG SKGCAF+K+ + +A AA+ +++G
Sbjct: 136 MLGKQQSEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQT 195
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR + Q ++P +G
Sbjct: 196 MPGASSSLVVKFADTDKERTLRRMHQMAGQLGI------------------FSPMTIQFG 237
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSN------MGPRNYAM 174
+ S+ +MQ + M G + + P A + N M P +
Sbjct: 238 AYGTYSHAMMQQQAALMAATQGSY-LNPMAAIAAAQMQQMAAFNVNGLVATPMTPSSGTS 296
Query: 175 PPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS-------VSPAVANSNPS 223
P G + AVP + P+ G+ G L N P S + P A S
Sbjct: 297 TPPGISAT---AVPSIATPI----GVNGFSALPPQTNGQPTSEPIYTNGIHPYPAQSPTV 349
Query: 224 TSSSGGTGSGGQ-IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
T +G Q GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT S
Sbjct: 350 TDPLQQAYAGVQHYAGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQS 409
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
KCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 410 KCFGFVSFDNPSSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 49 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKT 108
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 109 LPGMNRPIQVKPADSEGRGEDRK 131
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|345478760|ref|XP_001605205.2| PREDICTED: CUGBP Elav-like family member 4-like [Nasonia
vitripennis]
Length = 382
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 186/371 (50%), Gaps = 56/371 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF+ +GTI++ ILRG TS+GCAF+K+ T ++A +A+ +++G
Sbjct: 24 MLSKQQTEDDVRQLFTAFGTIEECTILRGPDGTSRGCAFIKFSTHQEAQSAINSLHGSQT 83
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL-PMGYAPPYNG- 118
M G+S LVVK+ADTEKERQ RR Q+ N +P +F P G
Sbjct: 84 MPGASSSLVVKYADTEKERQLRRMQQMAG------NMSLINPFVFNQFGPYGAYAQQQAA 137
Query: 119 -----------YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVN---QGNAMRGASPDLS 164
G A+ + G + + L M N ++PP + G + GA P L
Sbjct: 138 LMAAATAQGTYIGPMAALAAGQLPHALNGMPNT-----VVPPTSGTGTGQPVNGALPSLP 192
Query: 165 SNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGGML-------------------G 202
S P N+ M P+G P+V P Y G L G
Sbjct: 193 SPTMP-NFNMAAQTPNGQPAGTDPSVYTNGIPQTYAGHALHLSIPAQGLPNGEAALQHAG 251
Query: 203 HRPLNNSPGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQ 256
+ + G PAV A P T+ + G I GP G NLFIYH+PQEFGD
Sbjct: 252 YPGMQAYHGVAYPAVYGQFPQAIPQPMTTVAPQQREGCSISGPEGCNLFIYHLPQEFGDA 311
Query: 257 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 316
EL F FG V+S+KVF+D+AT SKCFGFVS+++ AQ AI MNG Q+G K+LKVQ
Sbjct: 312 ELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNQQCAQAAIQAMNGFQIGMKRLKVQ 371
Query: 317 LKRDNKQNKPY 327
LKR ++PY
Sbjct: 372 LKRPKDASRPY 382
>gi|12746396|gb|AAK07476.1|AF329266_1 CUG-BP and ETR-3 like factor 5 [Homo sapiens]
Length = 481
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 183/360 (50%), Gaps = 63/360 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 140 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 200 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 247
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 248 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPVAPASGLH 300
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 301 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 357
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 358 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 417
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 418 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 477
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 52 IPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 111
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 112 LPGMARPIQVKPADSE 127
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 226 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 283 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>gi|334326938|ref|XP_001363664.2| PREDICTED: CUGBP Elav-like family member 5-like [Monodelphis
domestica]
Length = 545
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 186/369 (50%), Gaps = 63/369 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G
Sbjct: 198 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQT 257
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q PSL LP PY+ Y
Sbjct: 258 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIF------TPSL--TLPFS---PYSAY- 305
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + G + + P V +S N P P SG
Sbjct: 306 -----AQALMQQQTTVLSTSHGSY-LSPGVAFSPCHIQQIGAVSLNGIPATPIAPASGLH 359
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP++A + +
Sbjct: 360 SPPLLGTAAVPGLVTPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPSMAETLH 416
Query: 222 PSTS----------SSGGTGSGGQI-------------EGPPGANLFIYHIPQEFGDQEL 258
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 417 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPIIQQQQQREGPEGCNLFIYHLPQEFGDSEL 476
Query: 259 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 318
F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLK
Sbjct: 477 MQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLK 536
Query: 319 RDNKQNKPY 327
R + PY
Sbjct: 537 RPKDASHPY 545
>gi|363742941|ref|XP_428898.3| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Gallus
gallus]
Length = 401
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 175/340 (51%), Gaps = 52/340 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K+++ +A AA+ A++G
Sbjct: 101 MLSKQQADEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ SQ Q FGA Y+ Y
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVASQLGMFSPIALQ----FGA--------YSAY- 207
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRN------YAM 174
+ LMQ + + + + P M+ +MG N +
Sbjct: 208 -----TQALMQQQAALVAAHSAY--LSPMATMAVQMQ--------HMGTVNPNGLIATPL 252
Query: 175 PPSGFVGSGYPAVP------GLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSS 227
PPS PA P G+Q Y YP G VSPA A P +
Sbjct: 253 PPSSAQSPAAPADPLQQAYAGMQHYTAAYPAAY----------GLVSPAFAPPGPLLAPP 302
Query: 228 GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 287
+ EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGF
Sbjct: 303 PPPQQQQR-EGPEGCNIFIYHLPQEFADTEILQMFLPFGNVISAKVFVDRATNQSKCFGF 361
Query: 288 VSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
VS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 362 VSFDNPASAQAAIHAMNGFQIGMKRLKVQLKRPKDANRPY 401
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|196012894|ref|XP_002116309.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
gi|190581264|gb|EDV21342.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
Length = 456
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 175/351 (49%), Gaps = 63/351 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E E+ ++FS YG+I+++ ILR +SKGC F+K+ TK +A A++ ++G
Sbjct: 128 MLGKLDDENELKSMFSPYGSIEEVTILRAIDGSSKGCGFVKFSTKSEAQVAIQNLHGSRN 187
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADTEK++ R+ QK NA + H FG YAP YN YG
Sbjct: 188 MPGASHQLVVKFADTEKDKYIRKMQK---------NASNNHIVNFGRQYASYAPQYNNYG 238
Query: 121 YQASGSYGLMQYRLPP------------------MQNQPGFHGIIPPVNQGNAMRGASPD 162
SYG Q+ L P M H + + N+ + P
Sbjct: 239 -----SYG--QFALQPAMQQQNNSNQNYGVHVGLMGQYTANHRLNAGSHSHNSTSMSHPQ 291
Query: 163 LS------SNMGPRNYAMPPSGFVGSGYPA--------VPGLQYPMPYPGGMLGHRPLNN 208
S + N +G VG G+P V +Q P + + P N+
Sbjct: 292 TSVTFPATTTQNNSNVVTGSAGAVGYGFPGYQININGLVDQIQSPYSVKYLIAQYAPFNH 351
Query: 209 SPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 268
+ SVS + + EGP G NLFIYH+P EF D +L N F +G V
Sbjct: 352 NAASVSASTVSPK---------------EGPAGCNLFIYHLPPEFTDYDLHNIFAPYGNV 396
Query: 269 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
+SAKV+++K T SKCFGFVSY++ +SA +AI+ +NG + GKKLKV+ K+
Sbjct: 397 VSAKVYINKITKQSKCFGFVSYDNASSAHHAISTLNGMMVYGKKLKVEYKK 447
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LP++ +E ++ +LF +G I +L +++ + + KGCAF+ Y K A AA A + K
Sbjct: 42 LPRDCTEEDLHSLFDQFGPIYELAVIKDRTTKQHKGCAFVTYCKKSSAEAAQSAFHEKKV 101
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G P+ VK AD E R+ R+
Sbjct: 102 LSGMPRPMQVKPADCE-NREERK 123
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 205 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQA 264
P N+S G + +N N S + I+ LF+ +P++ +++L + F
Sbjct: 4 PGNSSNGPTTSVDSNGNDSLQITSAVKDKDAIK------LFVGQLPRDCTEEDLHSLFDQ 57
Query: 265 FGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
FG + V D+ T K FV+Y +SA+ A
Sbjct: 58 FGPIYELAVIKDRTTKQHKGCAFVTYCKKSSAEAA 92
>gi|426379619|ref|XP_004056489.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Gorilla
gorilla gorilla]
Length = 454
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 172/339 (50%), Gaps = 36/339 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ HP+ LP+G Y
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGHLGAF------HPA---PLPLGACGAY---- 246
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG + Q + S + + PP
Sbjct: 247 ---TTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP---- 299
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ- 235
GSG +PGL P P G+ G PL N PGS + +P + S G Q
Sbjct: 300 GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQ 355
Query: 236 -------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 288
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFV
Sbjct: 356 AYAGMHHYAGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 415
Query: 289 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|397495532|ref|XP_003818606.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Pan paniscus]
Length = 454
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 172/339 (50%), Gaps = 36/339 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ HP+ LP+G Y
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGHLGAF------HPA---PLPLGACGAY---- 246
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG + Q + S + + PP
Sbjct: 247 ---TTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP---- 299
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ- 235
GSG +PGL P P G+ G PL N PGS + +P + S G Q
Sbjct: 300 GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQ 355
Query: 236 -------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 288
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFV
Sbjct: 356 AYTGMHHYAGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 415
Query: 289 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|327272096|ref|XP_003220822.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Anolis
carolinensis]
Length = 487
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 181/358 (50%), Gaps = 57/358 (15%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPM--GYAPPYNG 118
MEG S P+VVK+ADT+K+++ RR Q+ +Q N + +G L G P Y
Sbjct: 216 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT-----WGNLTGLGGLTPQYLA 270
Query: 119 YGYQASGSYGLMQYR----------------------LPPMQNQPGFHGIIPPVNQGNAM 156
QA+ S L + L + G G +N NA+
Sbjct: 271 LLQQATSSSNLGAFSGIQQMAVAASTANSTAGAAMNSLTSLGTLQGLAGATVGLNNINAL 330
Query: 157 RGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ------YPMPYPGGMLGHRPLNNSP 210
G + L+ +G +G + + A G+Q P Y +L +
Sbjct: 331 AGMAA-LNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQ------ 383
Query: 211 GSVSPAVANSNPSTSSSGGTGSG-GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 269
S++G G ++GP GANLFIYH+PQEFGDQ++ F FG V+
Sbjct: 384 --------------SAAGSQKEGLSFLKGPEGANLFIYHLPQEFGDQDILQMFMPFGNVI 429
Query: 270 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 430 SAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|167521936|ref|XP_001745306.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776264|gb|EDQ89884.1| predicted protein [Monosiga brevicollis MX1]
Length = 389
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 165/319 (51%), Gaps = 56/319 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML + ++E ++ A F +G ++DL ILR + +SKGCAF+K+ ++A +A+ ++
Sbjct: 111 MLARTMNEDDLRAKFGAFGHVEDLTILRHADGSSKGCAFVKFSNADEAQSAIANLHHSET 170
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M+G P+VVK AD EK++Q R+ Q+ Q NN M PYN
Sbjct: 171 MDGCRSPIVVKVADNEKQKQHRKLQR---QLNN----------------MNVMMPYNMIP 211
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
S SY M NQ G GN M +PD + MG + P G
Sbjct: 212 NPRSMSYN--------MYNQAANFGQF-----GNGM--PAPDHGA-MGEVDGGASPVGGF 255
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 240
YP+ P P+ G +P P + P SS Q EGP
Sbjct: 256 NMPYPSNPYGMASAPF-----GQQPYMGQPMA---------PRQSSQ-------QPEGPD 294
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G+NLFIYH+PQEF DQ L F FG V+SAKVFVDK TG SKCFGFVSY++PASA+ AI
Sbjct: 295 GSNLFIYHLPQEFNDQALAATFLPFGNVISAKVFVDKMTGQSKCFGFVSYDNPASAEAAI 354
Query: 301 AMMNGCQLGGKKLKVQLKR 319
MNG Q+G K+LKVQLKR
Sbjct: 355 TAMNGFQIGMKRLKVQLKR 373
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N SE +++ +FS +G I ++ ILR Q SKGCAFL + T++ A+ A+E + K
Sbjct: 24 IPRNYSEEDLTHIFSEFGHIYEVMILRDRQTHNSKGCAFLTFTTRQAAVDAIERHHEKTT 83
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ S P+ VK ADT++ R+
Sbjct: 84 LPNMSHPMQVKIADTDQRNAERK 106
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
+ P LFI IP+ + +++L + F FG + + D+ T SK F+++ + +A
Sbjct: 12 KDPDAMKLFIGQIPRNYSEEDLTHIFSEFGHIYEVMILRDRQTHNSKGCAFLTFTTRQAA 71
Query: 297 QNAI 300
+AI
Sbjct: 72 VDAI 75
>gi|289547741|ref|NP_001166155.1| CUGBP Elav-like family member 6 isoform 2 [Homo sapiens]
gi|194381648|dbj|BAG58778.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 171/339 (50%), Gaps = 36/339 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ HP+ LP+G Y
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGHLGAF------HPA---PLPLGACGAY---- 246
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG + Q + S + + PP
Sbjct: 247 ---TTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP---- 299
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ- 235
GSG +PGL P P G+ G PL N PGS + +P + S G Q
Sbjct: 300 GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQ 355
Query: 236 -------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 288
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFV
Sbjct: 356 AYAGMHHYAGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 415
Query: 289 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|332236066|ref|XP_003267226.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Nomascus
leucogenys]
Length = 344
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 183/346 (52%), Gaps = 45/346 (13%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 25 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q A +L + HP+ LP+G Y
Sbjct: 85 MAGASSSLVVKLADTDRERALRRM---QQMAGHL---GAFHPA---PLPLGACGAY---- 131
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG G + V A +++ + P PP
Sbjct: 132 ---TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAAFSLVAAPLLPAAANSPP---- 183
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS-------VSPAVANSNPSTSSSGG 229
GSG A+PGL P P G+ G PL N PGS +SP A + PS +
Sbjct: 184 GSGPGALPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPA-AYPSAYAPVS 238
Query: 230 TG--------SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
T Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT
Sbjct: 239 TAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQ 298
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 299 SKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
>gi|146197847|dbj|BAF57635.1| bruno-like protein [Dugesia japonica]
Length = 402
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 170/342 (49%), Gaps = 33/342 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML KN ++ V +F+ +G I++ +L+ SKGCAF+K+ A AA+ A++ K
Sbjct: 43 MLSKNQTDENVQNMFTKFGKIEECTVLKDQNGNSKGCAFVKFLNHTDARAAINALHASQK 102
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN--------NLPNADSQ-----HPSLFGA 107
MEG+S LVVK+ADT+K++Q R+ Q+ N ++P SQ +P + A
Sbjct: 103 MEGASSSLVVKFADTDKQKQIRKLQQNLPDLNILNSHIPIHIPYYTSQCGPVINPEMNSA 162
Query: 108 LPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASP----- 161
+P + P N Y A + +PP I P N +M P
Sbjct: 163 IPTTQFIPNCNEYILAAQIQQINLFSNIPP----------IYPSNSIVSMPSTHPVPMID 212
Query: 162 -DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLN-NSPGSVSPAVAN 219
+ N P+ M + L P+ PG + + LN P A N
Sbjct: 213 YSIPINNLPKTDQMTMKPVLDVQQITQDNLNRPIVTPGSFMSYPFLNVQIPTGYQAAFPN 272
Query: 220 SNPST--SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 277
+N S+ +S S GP G NLFIYH+PQE GD +L F FG V+S+KV+VD+
Sbjct: 273 NNLSSINQNSNDVKSTPLPTGPEGCNLFIYHLPQEIGDLQLYQIFMHFGNVISSKVYVDR 332
Query: 278 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
AT SKCFGFVSY+ PA A AI MNG +G K+LKVQLK+
Sbjct: 333 ATNQSKCFGFVSYDDPACANAAIKSMNGYHIGTKRLKVQLKK 374
>gi|294884853|gb|ADF47437.1| Bruno 5-like protein [Dugesia japonica]
Length = 381
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 170/342 (49%), Gaps = 33/342 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML KN ++ V +F+ +G I++ +L+ SKGCAF+K+ A AA+ A++ K
Sbjct: 22 MLSKNQTDENVQNMFTKFGKIEECTVLKDQNGNSKGCAFVKFLNHTDARAAINALHASQK 81
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN--------NLPNADSQ-----HPSLFGA 107
MEG+S LVVK+ADT+K++Q R+ Q+ N ++P SQ +P + A
Sbjct: 82 MEGASSSLVVKFADTDKQKQIRKLQQNLPDLNILNSHIPIHIPYYTSQCGPVINPEMNSA 141
Query: 108 LPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASP----- 161
+P + P N Y A + +PP I P N +M P
Sbjct: 142 IPTTQFIPNCNEYILAAQIQQINLFSNIPP----------IYPSNSIVSMPSTHPVPMID 191
Query: 162 -DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLN-NSPGSVSPAVAN 219
+ N P+ M + L P+ PG + + LN P A N
Sbjct: 192 YSIPINNLPKTDQMTMKPVLDVQQITQDNLNRPIVTPGSFMSYPFLNVQIPTGYQAAFPN 251
Query: 220 SNPST--SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 277
+N S+ +S S GP G NLFIYH+PQE GD +L F FG V+S+KV+VD+
Sbjct: 252 NNLSSINQNSNDVKSTPLPTGPEGCNLFIYHLPQEIGDLQLYQIFMHFGNVISSKVYVDR 311
Query: 278 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
AT SKCFGFVSY+ PA A AI MNG +G K+LKVQLK+
Sbjct: 312 ATNQSKCFGFVSYDDPACANAAIKSMNGYHIGTKRLKVQLKK 353
>gi|340380143|ref|XP_003388583.1| PREDICTED: CUGBP Elav-like family member 4-like [Amphimedon
queenslandica]
Length = 494
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 180/361 (49%), Gaps = 69/361 (19%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K + E+ V ++F +G I++L +L+ S+GCAF+K+ ++++A +A+ ++G
Sbjct: 152 MLSKTIDESHVRSMFERFGHIEELTVLKDKDGYSRGCAFIKFSSRQEAQSAINEMHGSEI 211
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP-NADSQ---HPSLFGALPMGYAPPY 116
M G+S PLVVK+ADTE+ER AR+ QKA Q L N Q HP F P+ YA
Sbjct: 212 MAGASNPLVVKYADTERERHARKMQKAMQQFAELSLNPVFQVLPHPQFFN--PIVYAQ-- 267
Query: 117 NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPP 176
LMQ Q P G P ++ G A L S P + P
Sbjct: 268 ------------LMQ------QQSPLLSGATPTLSPGGLYSPAPHTLLSPSSPTHVPSP- 308
Query: 177 SGFVGSGYPAVP-----------GLQYPMPYPGGMLG-------------------HRPL 206
+GS + GL + + PGGM G H PL
Sbjct: 309 ---IGSSHAGATGTGTTAIGSPGGLHHGLA-PGGMGGPHTTGLSHNGLHGASSEHIHSPL 364
Query: 207 NNSPGSVS---PAVANSNPST-----SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQEL 258
+ S + +NPST + Q EGP G NLFIYH+PQ++GDQEL
Sbjct: 365 QSPLHGFSGYGLPYSFANPSTFGVPSPTPPPPLPSSQKEGPEGCNLFIYHLPQDYGDQEL 424
Query: 259 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 318
N F +G ++SAKV+VDK T SKCFGFVSY++P SA AI +NG ++G K+LKV+ K
Sbjct: 425 VNLFGQYGHIVSAKVYVDKNTQQSKCFGFVSYDNPQSASTAIFGLNGLEIGHKRLKVEHK 484
Query: 319 R 319
+
Sbjct: 485 K 485
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+ E ++ YG I +L ILR + + KGCAF+ Y ++E A A ++ K
Sbjct: 66 VPKHFEEEDLRPYLEQYGPIGELLILRHKATRQHKGCAFVTYLSRESAELAQRELHDKVI 125
Query: 61 MEGSSVPLVVKWADTEKER 79
+ + PL V A T++E
Sbjct: 126 LPTMTRPLQVNAAGTKQEE 144
>gi|207028384|ref|NP_001128707.1| CUGBP, Elav-like family member 2 [Xenopus laevis]
gi|197359134|gb|ACH69783.1| RNA binding protein Bruno-like 3b [Xenopus laevis]
Length = 493
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 181/358 (50%), Gaps = 51/358 (14%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRG----SQQTSKGCAFLKYETKEQALAALEAIN 56
M+ K +E ++ +FS +G I++ +ILRG S+ + CAF+ + T+ A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRASQHCCAFVTFSTRAMTQNAIKAMH 215
Query: 57 GKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPM--GYAP 114
MEG S P+VVK+ADT+K+++ RR Q+ +Q N + +G L G P
Sbjct: 216 QSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTP 270
Query: 115 PYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAM 174
Y QA+ S L + G + + N+ GA+ + +++G
Sbjct: 271 QYLALLQQATSSSNLGAF--------SGIQQMAVAASTANSSAGAAMNSLTSLGTLQ--- 319
Query: 175 PPSGFVGS--GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAV--------------- 217
G G+ G + L GG LG L N A+
Sbjct: 320 ---GLAGATVGLNNINALAGMAALNGG-LGATGLTNGTACTMDALTQAYSGIQQYAAAAL 375
Query: 218 ----ANSNPSTSSSGGTGSGGQI----EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 269
+ S S+ G+ G + +GP GANLFIYH+PQEFGDQ++ F FG V+
Sbjct: 376 PTLYSQSLLQQQSAAGSQKEGLLFISSQGPEGANLFIYHLPQEFGDQDILQMFMPFGNVI 435
Query: 270 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 436 SAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 493
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGVHHPIQMKPADSEK 143
>gi|426241648|ref|XP_004014701.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 2
[Ovis aries]
Length = 551
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 179/382 (46%), Gaps = 73/382 (19%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILR S+GCAF+ + T+ A A++A++
Sbjct: 188 MVSKKCNENDIRVMFSPFGQIEECRILREPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 247
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNG 118
MEG S P+VVK+ADT+K+++ RR Q+ +Q N + +G L G P Y
Sbjct: 248 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT-----WGNLTGLGGLTPQYLA 302
Query: 119 YGYQASGSYGLMQY---------RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP 169
QA+ S L + +QN G+ N + S L + P
Sbjct: 303 LLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAGL-----XANPLSTTSSALGALTSP 357
Query: 170 RNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG 229
A P+ G+ ++ L G +G +N G++ N + +GG
Sbjct: 358 V-AASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTI-------NSMAALNGG 409
Query: 230 TGSGGQIEGPPG--------------------------------------------ANLF 245
G+ G G G ANLF
Sbjct: 410 LGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLF 469
Query: 246 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 305
IYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG
Sbjct: 470 IYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNG 529
Query: 306 CQLGGKKLKVQLKRDNKQNKPY 327
Q+G K+LKVQLKR +KPY
Sbjct: 530 FQIGMKRLKVQLKRSKNDSKPY 551
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 97 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 156
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 157 KTLPGMHHPIQMKPADSEK 175
>gi|355755315|gb|EHH59062.1| CUGBP Elav-like family member 5, partial [Macaca fascicularis]
Length = 368
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 161/311 (51%), Gaps = 47/311 (15%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 95
GCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 86 GCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL- 144
Query: 96 NADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNA 155
PSL LP PY+ Y + LMQ + + + + P V
Sbjct: 145 -----TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY--LSPGVAFSPC 186
Query: 156 MRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHR 204
+S N P P SG G AVPGL P+ P+PGG H
Sbjct: 187 HIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HP 243
Query: 205 PLNN--SPGSV-----SPAVANS-NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQ 256
L + G V SP VA + +P+ S Q GP G NLFIYH+PQEFGD
Sbjct: 244 ALETVYANGLVPYPAQSPTVAETLHPAFSGVQ------QYTGPEGCNLFIYHLPQEFGDT 297
Query: 257 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 316
EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQ
Sbjct: 298 ELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQ 357
Query: 317 LKRDNKQNKPY 327
LKR PY
Sbjct: 358 LKRPKDPGHPY 368
>gi|299472576|emb|CBN78228.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 583
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 177/363 (48%), Gaps = 66/363 (18%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLP + + ++ +FS +G I ++ +R T KGCAF+K+ T+ A+AA+EA++ K
Sbjct: 78 MLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFSTRSAAIAAIEALHEKCT 137
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M+G++ LVVK+AD +K AQ A+ +P P GA P+GY Y+G G
Sbjct: 138 MDGATRALVVKFADVKK------AQTAKGWM--VP------PDARGASPLGYNGRYHGGG 183
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG-- 178
G + PG + + R PD +++ G PP G
Sbjct: 184 TSVGGYW--------QATGAPGGRDVY------SKGREVYPDYANHRGYPYQVGPPGGGY 229
Query: 179 --FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNS------PGSVSPAVANSNPSTS----- 225
G YP PG P GG + + LN S S+SP+ + S +
Sbjct: 230 SQSYGPEYPHHPGQ--PQARHGGYVAYSNLNPSHYPAQVDRSLSPSSGAGDRSHNFSSPP 287
Query: 226 --------------------SSGGTGSGGQ-IEGPPGANLFIYHIPQEFGDQELGNAFQA 264
S G G G + EGPPGANLFIYH+P + D +L AF
Sbjct: 288 GGPVPGGIGGMGGMRGDGRDSRGEHGGGARPQEGPPGANLFIYHLPNDLTDADLATAFAP 347
Query: 265 FGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 324
FG V+SAKVF+DK T SK FGFVSY PA A+ AI+ MNG Q+G K+LKVQ K+ + +
Sbjct: 348 FGHVVSAKVFLDKRTQESKGFGFVSYNHPAEAEVAISKMNGFQIGSKRLKVQHKKADHGD 407
Query: 325 KPY 327
+ +
Sbjct: 408 REH 410
>gi|325189112|emb|CCA23638.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 550
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 178/327 (54%), Gaps = 24/327 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT--SKGCAFLKYETKEQALAALEAINGK 58
M+PK +E + +F +G I ++ ILR Q T SKGCAFLK++ +E A+A++E +NGK
Sbjct: 171 MIPKTATEQAIYDIFGEFGPIDEVFILR-HQPTGQSKGCAFLKFKERESAVASIEQLNGK 229
Query: 59 HKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNG 118
M PLVVK+AD+ ++R Q+ +S N+D+ + PMG NG
Sbjct: 230 ITMMNGVSPLVVKFADSRRQR----LQRVRST-----NSDTSQAGYWQIPPMGDGS-VNG 279
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP--- 175
S + Q+ MQ F + G+ + G++ +S M YA+
Sbjct: 280 ISLPVSQMQQMQQHY---MQQVQAFGTQASGIAPGSVLPGSTSPTNSYMYYNPYALSGAV 336
Query: 176 PSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSN---PSTSSSGGTGS 232
P G+ S Y + G Y + + PGS S A++ S +S+GG S
Sbjct: 337 PYGYTNSLYETMGGPN--ASYSESAVHSGSSDVLPGSDSAALSGSMVGMDINASAGGVRS 394
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
Q+EGPPGANLFIYH+P + D +L AF FG V+SAKV++DK TG SK FGFVSY++
Sbjct: 395 TTQLEGPPGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKLTGESKGFGFVSYDA 454
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKR 319
+A NAIA MNG Q+G K+LKVQ KR
Sbjct: 455 AEAADNAIASMNGFQIGSKRLKVQHKR 481
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI +P+ + EL +AFG V+ + DK TG + F S+ SP A+ A+ +
Sbjct: 78 LFIGQVPRTMTETELLPILEAFGEVVDLTIIRDKLTGSHRGCAFASFASPEDAERAVEEL 137
Query: 304 N 304
+
Sbjct: 138 H 138
>gi|444516747|gb|ELV11280.1| Poly [ADP-ribose] polymerase 6 [Tupaia chinensis]
Length = 972
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 149/314 (47%), Gaps = 84/314 (26%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TS+GCAF+K+ ++ +AL + ++G
Sbjct: 101 MLGKQQGEEDVRRLFQPFGQIQECTVLRSPDGTSRGCAFVKFGSQGEAL---QGLHGSRT 157
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G
Sbjct: 158 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLG--------- 199
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
A G+Y N GA P S+ + P
Sbjct: 200 --ACGAY----------------------TTATNGQPGADPLYSNGLSP----------- 224
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 240
YP YP + P++ + P ++ P Q EGP
Sbjct: 225 -----------YPAAYPSA---YAPVSTA----CPQQPSALPQQ----------QREGPE 256
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI
Sbjct: 257 GCNLFIYHLPQEFGDAELTQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAI 316
Query: 301 AMMNGCQLGGKKLK 314
MNG Q+G K+LK
Sbjct: 317 QAMNGFQIGMKRLK 330
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 8 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 67
Query: 300 I 300
+
Sbjct: 68 L 68
>gi|85376478|gb|ABC70476.1| bruno-like [Schmidtea mediterranea]
Length = 404
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 172/368 (46%), Gaps = 59/368 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAING-KH 59
ML KN SE +V L YG IK+ IL+ S SKGCAF+ Y ++A A+E++NG K
Sbjct: 40 MLNKNQSEDDVRQLCEPYGCIKNCMILKDSYGNSKGCAFVTYNNSDEANMAIESLNGMKT 99
Query: 60 KMEGSSV--PLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAP--- 114
M + +V + AD E+ERQ R+ Q P P G G P
Sbjct: 100 SMACPELGSCIVARLADNEQERQLRKMQMQ------FPAIQLLTPQNVGYYNQGIVPMIL 153
Query: 115 ---PY----------NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASP 161
P+ N Y Q S PP+ N + P G M A+
Sbjct: 154 QQFPHATDQQTANLINAYALQMHLSQMYSPNLTPPLVNSSP--SVTPQPQIGVPMSAAN- 210
Query: 162 DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSV------- 213
D+SSN N+ + PS P P L Y P ++ +N +P ++
Sbjct: 211 DISSNQCSMNHFVLPS-INNENIPLSPALNSYINPAHPQLINIANINFTPEALHLPSLYS 269
Query: 214 ----------SPAVA----NSNPSTSSSGGTGSGGQ--------IEGPPGANLFIYHIPQ 251
+PA+ N P+T++ Q + GP G NLFIYH+PQ
Sbjct: 270 MFPQCGFNLNTPALGLSGQNIYPNTTALSLQYQQNQKDGIKDNIVTGPEGCNLFIYHLPQ 329
Query: 252 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 311
+FGD L F FG V+SAKV++D+AT SKCFGFVS+++ ++A+ AI MNG Q+G K
Sbjct: 330 DFGDAALAQLFTPFGNVISAKVYLDRATNQSKCFGFVSFDNASNAEAAIRGMNGFQIGTK 389
Query: 312 KLKVQLKR 319
+LKVQLKR
Sbjct: 390 RLKVQLKR 397
>gi|198431689|ref|XP_002121627.1| PREDICTED: similar to CUG triplet repeat, RNA binding protein 2
[Ciona intestinalis]
Length = 498
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 185/388 (47%), Gaps = 64/388 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K ++E ++ LF +G I++ +IL SKGCAF+ Y + A A+ ++
Sbjct: 114 MISKKMTEQDLRQLFCPFGNIEECRILMNPDGVSKGCAFVTYSKRVSAQNAIRNMHQSTT 173
Query: 61 MEGSSVPLVVKWA----DTEKERQ----ARRAQKAQSQANNLPNADSQHPSLFG-ALPMG 111
MEG S P+VVK A D E+++ A + + +Q NL + P L A
Sbjct: 174 MEGCSAPIVVKIADSPKDKERKKTQSQLAMQLNQFSNQWKNLSGLAALAPVLQSLACNNQ 233
Query: 112 YAPPYNGYGYQASGSYGLMQYRL---------PPMQNQP------------GFHGIIPPV 150
Y P N + SG + Q + + NQP G GI
Sbjct: 234 YNAPSNQHN---SGVFSTTQLQQALTIAAAAQTLLSNQPSSVSHNNSNSVPGSSGISSMT 290
Query: 151 NQGNAMRGASPD--------LSSNMGPRNYAMP-PSGFVGSGYPAVPGLQYPMPYPGGML 201
+Q ASP +SNM + ++ P PS + +G + P+ L
Sbjct: 291 SQYGGNVCASPSGTSYRSHSHNSNMWAQQHSAPYPSAGMNNGMSSGCSSTSPLDPMTMNL 350
Query: 202 GHR-------PLNNSPGSVSPAV--------ANSNPSTSSS-------GGTGSGGQIEGP 239
+ LN+SP S + + A ++P++ + + +G EGP
Sbjct: 351 AQQSGSNLTLDLNHSPSSTATGINPTAHMLAALTSPTSMYNQSMMHPHNSSPAGSHKEGP 410
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
G+NLFIYH+P F D +L F FG ++SAKVF+DK T +SKCFGFVSY++PASAQ+A
Sbjct: 411 EGSNLFIYHLPTHFTDHDLMQTFFTFGTIVSAKVFIDKQTNLSKCFGFVSYDNPASAQHA 470
Query: 300 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
I M+G Q+G K+LKVQLKR ++K Y
Sbjct: 471 IQAMHGFQIGMKRLKVQLKRPKGESKAY 498
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E+EV YG I L ILR SKGC F+ + T++ ALAA ++
Sbjct: 27 IPKTWVESEVREFLEGYGPIYQLNILREKGSVMSKGCCFVTFYTRKAALAAQNELHNMKT 86
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + +K AD+E + + R+
Sbjct: 87 LPGMHHCVQMKPADSENKSEDRK 109
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI--- 300
LFI I ++ +Q+L F FG + ++ ++ GVSK FV+Y SAQNAI
Sbjct: 110 LFIGMISKKMTEQDLRQLFCPFGNIEECRILMN-PDGVSKGCAFVTYSKRVSAQNAIRNM 168
Query: 301 ---AMMNGC 306
M GC
Sbjct: 169 HQSTTMEGC 177
>gi|219109993|ref|XP_002176749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411284|gb|EEC51212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 499
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 160/323 (49%), Gaps = 64/323 (19%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML + +E E+ LF +G I+++ ++R + +SK AFL+Y + A+ A+E +N +
Sbjct: 215 MLSRKATEVEIRELFEPFGEIREVYMIRNADGSSKCAAFLRYMKRGAAVQAIETLNNIYM 274
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA--PPYNG 118
MEG++ PL+V++AD + +R R+ + + + A+ GYA PP+
Sbjct: 275 MEGAARPLIVRFADNKHQRHQRQIRNIRRH------------EMIAAMGGGYATYPPH-- 320
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP-PS 177
+Q Q G G GASP Y +P P
Sbjct: 321 ------------------VQVQMGMPG----------HPGASP---------QYTVPVPP 343
Query: 178 GFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQ-I 236
+V + Y G PMP GH P P +P A P +S + +
Sbjct: 344 HYVEAAYGPPNGA--PMP------GH-PYMYPPQQYAPTPAYIYPEHTSEETKPTNNRPR 394
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP GANLF+YH+P + D +L AF FG V+SAKV+VDK +G SK FGFVSY+S +A
Sbjct: 395 EGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDKYSGESKGFGFVSYDSVIAA 454
Query: 297 QNAIAMMNGCQLGGKKLKVQLKR 319
+ AI MNG Q+G K+LKVQ KR
Sbjct: 455 EAAIEQMNGFQIGNKRLKVQHKR 477
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK +SE +V F +G +KD+ I+R +GCAF+ Y + A A EA++
Sbjct: 130 VPKAMSEEDVFPTFDSFGPLKDVAIIRDKHTGLHRGCAFVTYWSAADAERAQEALHDTFT 189
Query: 61 MEGSSVPLVVKWAD 74
G+ VK A+
Sbjct: 190 FPGARRAAQVKPAE 203
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 218 ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 277
A+ N SS + E P LF+ +P+ ++++ F +FG + + DK
Sbjct: 100 AHYNGGDSSGNASADNDDGEDDP-MKLFVGQVPKAMSEEDVFPTFDSFGPLKDVAIIRDK 158
Query: 278 ATGVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLK 318
TG+ + FV+Y S A A+ A A+ + G + Q+K
Sbjct: 159 HTGLHRGCAFVTYWSAADAERAQEALHDTFTFPGARRAAQVK 200
>gi|348667006|gb|EGZ06832.1| hypothetical protein PHYSODRAFT_353005 [Phytophthora sojae]
Length = 507
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 168/327 (51%), Gaps = 25/327 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKH 59
M+PK EA + +F ++GTI+++ ILR + SKGCAFLK++ + ALAA+E +NG
Sbjct: 131 MIPKTADEAAIREVFELFGTIEEVYILRHPATGQSKGCAFLKFKERSSALAAIEEVNGNV 190
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 119
M+ + PLVVK+AD+ R Q+ Q N A++ P GA G A P
Sbjct: 191 TMDRGTSPLVVKFADS-------RRQRLQRARNLAAAANAYWPLPPGA---GLAFPQLQQ 240
Query: 120 GYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGF 179
Q P G+ PV G+ + P +A +G
Sbjct: 241 LQQQYMQQMQAFGAQAAAGLNPAVAGLGSPVEATAGGPGSPTNSFMYYNPYGFAAGAAGP 300
Query: 180 VG-SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
G G P V G + + GG+ L G A A ++ +TS Q+EG
Sbjct: 301 YGFGGLPNVGGAGFDI-QAGGLGAGLDLQ---GQGVEAAAKASRTTS---------QLEG 347
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P GANLFIYH+P + D +L AF FG V+SAKV++DK TG SK FGFVSY+S +A
Sbjct: 348 PTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADA 407
Query: 299 AIAMMNGCQLGGKKLKVQLKRDNKQNK 325
AIA MNG Q+G K+LKVQ KR +++N
Sbjct: 408 AIASMNGFQIGTKRLKVQHKRIHQRND 434
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ + ++G ++DL I+R +GCAF Y T++ A A++ ++ K
Sbjct: 43 VPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAVQELHNKVT 102
Query: 61 MEGSSVPLVVKWAD 74
+ S PL V+ A+
Sbjct: 103 LPQSINPLQVRPAE 116
>gi|402590229|gb|EJW84160.1| trinucleotide repeat containing 4 [Wuchereria bancrofti]
Length = 315
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 154/328 (46%), Gaps = 65/328 (19%)
Query: 51 ALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGA--- 107
A+ A++G M G+S LVVK+ADTEKERQ RR Q+ +Q L ++
Sbjct: 2 AINALHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAAQMGLLNPVLVNQAGVYNTAYQ 61
Query: 108 -------------------LPMGYAPPYNGYGYQASGSYG-------LMQYRLPPMQNQP 141
P+ AP A+G G L Q+ L P+ P
Sbjct: 62 QLLQQQATLVAAQTAAAAYFPVAMAP---QTALTAAGLAGTTNPATFLTQHPLQPLSALP 118
Query: 142 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-------AVPGLQYPM 194
+ Q N+++ S LS P +YA + V P AV Y +
Sbjct: 119 --------LQQANSVQAIS-ALSQPYAPVDYAAAAAASVTQYAPSSTAAAVAVDSTAYTL 169
Query: 195 PYPGGM-LGHRPLNNSPGSVSPAV---ANSNPSTSSSGGT-----------GSGGQIEGP 239
P G + G P P + +P V +NP + G+ ++ GP
Sbjct: 170 PASGTLPAGTIPTVTLPSAYNPLVNLEQQANPYNQALQQAIALQQAAILFPGAQKEVLGP 229
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVSY++ ASA A
Sbjct: 230 EGCNLFIYHLPQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFVSYDNTASAMAA 289
Query: 300 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
I MNG Q+G K+LKVQLKR ++KPY
Sbjct: 290 IQAMNGFQIGMKRLKVQLKR--PRDKPY 315
>gi|294884849|gb|ADF47435.1| bruno-like protein [Dugesia japonica]
Length = 372
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 171/366 (46%), Gaps = 64/366 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAING-KH 59
ML KN SE +V L YG IK+ IL+ + + CAF+ + + ++A A+EA+NG K
Sbjct: 16 MLNKNQSEDDVRQLCEPYGCIKNCMILKDA--YGQSCAFVTFNSSDEANIAIEALNGLKT 73
Query: 60 KMEGSSV--PLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAP--- 114
M + +V + AD ++ERQ R+ Q +P P G G P
Sbjct: 74 SMACPELGSTIVARLADNDQERQLRKMQMQ------IPAVQFLTPQNVGYYNQGIVPMIL 127
Query: 115 ---PY--NGYGYQASGSYGLMQYR-------LPPMQN-------QPGF------------ 143
P+ + +Y LM + PP+ N QP
Sbjct: 128 QQFPHATDQQTTNIINAYALMHFNQMYSPNLTPPIMNSSPSVTPQPQIGVPMSASNDISS 187
Query: 144 ------HGIIPPVNQG----NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP 193
H +IP ++ N+ +P L N+ N++ P + + S Y P +
Sbjct: 188 NQCSINHYVIPAISNETLSPNSYINPNPQLI-NIANINFS-PEALHLSSLYSMFPQCGFN 245
Query: 194 MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF 253
+ P G+ N P ++S T G S + GP G NLFIYH+PQ+F
Sbjct: 246 INQPLGLSSQNVYQN-PATLSLQFQ----QTQKDGMKDSI--VTGPEGCNLFIYHLPQDF 298
Query: 254 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 313
GD L F FG V+SAKV++D+AT SKCFGFVS+++ +SA+ AI MNG Q+G K+L
Sbjct: 299 GDTALAQLFAPFGNVISAKVYLDRATNQSKCFGFVSFDNASSAEGAIRGMNGFQIGTKRL 358
Query: 314 KVQLKR 319
KVQLKR
Sbjct: 359 KVQLKR 364
>gi|410921164|ref|XP_003974053.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Takifugu
rubripes]
Length = 500
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 166/372 (44%), Gaps = 89/372 (23%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G
Sbjct: 173 MLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQT 232
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q FG A P++ Y
Sbjct: 233 MPGASSSLVVKFADTDKERTIRRMQQMVGQ--------------FGIFNPAIALPFSTY- 277
Query: 121 YQASGSYGLMQYRLPPMQNQPGFH---GIIPPVNQGNAMRGASPDL--SSNMGPRNYAMP 175
+S ++ LMQ + M G + + P Q + M + + + M P + P
Sbjct: 278 --SSYAHALMQQQAAIMAASHGGYLTPSVAFPATQIHQMGALNINSLPPTPMTPVSGDSP 335
Query: 176 PSGFVGSGYPAVPGLQYPMPYPGGMLG--HRPLNNSPGSVSPAVANSNPSTSSSGGTGSG 233
P+ S P++ P G G H+P N P +V N P S+ T +
Sbjct: 336 PANITTSAVPSI-----VTPIVNGFTGIPHQP-NGHP-AVETMYTNGLPPYSTQSPTAAD 388
Query: 234 ------------------------GQI--------------EGPPGANLFIYHIPQEFGD 255
GQ EGP G NLFIYH+PQEFGD
Sbjct: 389 TLQQAFTGVQQYTAIYPATTLTPIGQTLPQPPQVIQQQQQREGPEGCNLFIYHLPQEFGD 448
Query: 256 QELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV 315
EL F FGFVS+++PASAQ AI MNG Q+G K+LKV
Sbjct: 449 NELMQMFLP--------------------FGFVSFDNPASAQAAIQAMNGFQIGMKRLKV 488
Query: 316 QLKRDNKQNKPY 327
QLKR ++PY
Sbjct: 489 QLKRPKDASRPY 500
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E A+ A A++ +
Sbjct: 85 IPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKT 144
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 145 LPGMTRPIQVKPADSE 160
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 290
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
ES AQNA+ L G +Q+K + +++
Sbjct: 130 ESAIKAQNALHEQKT--LPGMTRPIQVKPADSESR 162
>gi|242022170|ref|XP_002431514.1| hypothetical protein Phum_PHUM533900 [Pediculus humanus corporis]
gi|212516808|gb|EEB18776.1| hypothetical protein Phum_PHUM533900 [Pediculus humanus corporis]
Length = 599
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 79/101 (78%)
Query: 227 SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
S +G+G QIEGP GANLFIYH+PQEF D +L F +FG V+SAKVF+DK T +SKCFG
Sbjct: 499 SITSGAGKQIEGPDGANLFIYHLPQEFSDADLATTFHSFGNVISAKVFIDKMTNLSKCFG 558
Query: 287 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
FVSY++ SAQ+AI MNG Q+G K+LKVQLKR + ++PY
Sbjct: 559 FVSYDNVLSAQSAIQAMNGFQIGTKRLKVQLKRSKEASRPY 599
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E++V LFS YG I++ +LR + T + CAF+ Y +K+ A+ A++A++
Sbjct: 1 MLAKKCTESDVRNLFSPYGNIEECTVLRDT--TGQSCAFVTYASKQSAINAIKAMHHSQT 58
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M+G S LVVK+ADT+KE+ +R Q+ Q+ NL
Sbjct: 59 MDGCSSALVVKFADTQKEKDQKRLQQMQANLWNL 92
>gi|344281041|ref|XP_003412289.1| PREDICTED: CUGBP Elav-like family member 1-like [Loxodonta
africana]
Length = 512
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 140 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 MEGCSSPMVVKFADTQKDKEQKR 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEKNNVEDR 134
>gi|350580113|ref|XP_003122868.3| PREDICTED: CUGBP, Elav-like family member 1, partial [Sus scrofa]
Length = 337
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 226 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 284
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 285 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 337
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 37 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 83
CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 1 CAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 47
>gi|395815677|ref|XP_003781351.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 510
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 399 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 457
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 458 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 510
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|441646598|ref|XP_004090758.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|383415255|gb|AFH30841.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939404|gb|AFI33307.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|387540328|gb|AFJ70791.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410259332|gb|JAA17632.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298516|gb|JAA27858.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357404|gb|JAA44564.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 509
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 398 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 456
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 457 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|334331817|ref|XP_001364287.2| PREDICTED: CUGBP Elav-like family member 1-like [Monodelphis
domestica]
Length = 512
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 140 MISKKCNENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 MEGCSSPIVVKFADTQKDKEQKR 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 107 HNMKILPGMHHPIQMKPADSEKNNVEDR 134
>gi|431915767|gb|ELK16100.1| CUG-BP- and ETR-3-like factor 1 [Pteropus alecto]
Length = 513
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|432090407|gb|ELK23833.1| CUGBP Elav-like family member 1 [Myotis davidii]
Length = 513
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|301772548|ref|XP_002921692.1| PREDICTED: CUGBP Elav-like family member 1-like [Ailuropoda
melanoleuca]
Length = 512
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 140 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 MEGCSSPMVVKFADTQKDKEQKR 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEKNNVEDR 134
>gi|395543757|ref|XP_003773780.1| PREDICTED: CUGBP Elav-like family member 1 [Sarcophilus harrisii]
Length = 513
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCNENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPIVVKFADTQKDKEQKR 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKILPGMHHPIQMKPADSEK 128
>gi|354469942|ref|XP_003497371.1| PREDICTED: CUGBP Elav-like family member 1-like [Cricetulus
griseus]
Length = 513
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|344247846|gb|EGW03950.1| CUG-BP- and ETR-3-like factor 1 [Cricetulus griseus]
Length = 514
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 403 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 461
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|343961815|dbj|BAK62495.1| CUG triplet repeat RNA-binding protein 1 [Pan troglodytes]
Length = 483
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 372 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 430
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|348558646|ref|XP_003465128.1| PREDICTED: CUGBP Elav-like family member 1-like [Cavia porcellus]
Length = 513
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|38570081|ref|NP_941989.1| CUGBP Elav-like family member 1 isoform 2 [Homo sapiens]
gi|332259916|ref|XP_003279030.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|402893568|ref|XP_003909964.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Papio anubis]
gi|8745537|gb|AAF78956.1|AF267534_1 CUG-binding protein A isoform [Homo sapiens]
gi|21411010|gb|AAH31079.1| CUG triplet repeat, RNA binding protein 1 [Homo sapiens]
gi|119588317|gb|EAW67911.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_f [Homo
sapiens]
gi|123994083|gb|ABM84643.1| CUG triplet repeat, RNA binding protein 1 [synthetic construct]
Length = 483
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 372 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 430
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|5729794|ref|NP_006551.1| CUGBP Elav-like family member 1 isoform 1 [Homo sapiens]
gi|402893570|ref|XP_003909965.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Papio anubis]
gi|1518802|gb|AAC50895.1| CUG-BP/hNab50 [Homo sapiens]
gi|119588313|gb|EAW67907.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Homo
sapiens]
gi|380783235|gb|AFE63493.1| CUGBP Elav-like family member 1 isoform 1 [Macaca mulatta]
gi|410222890|gb|JAA08664.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 482
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 371 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 429
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 430 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|395815679|ref|XP_003781352.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 482
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 371 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 429
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 430 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|338712047|ref|XP_003362650.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 2 [Equus
caballus]
gi|345783916|ref|XP_003432496.1| PREDICTED: CUGBP, Elav-like family member 1 [Canis lupus
familiaris]
gi|410973717|ref|XP_003993294.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Felis catus]
Length = 512
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 140 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 MEGCSSPMVVKFADTQKDKEQKR 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEKNNVEDR 134
>gi|291384970|ref|XP_002709144.1| PREDICTED: CUG triplet repeat, RNA-binding protein 1-like
[Oryctolagus cuniculus]
Length = 483
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 372 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 430
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|194217895|ref|XP_001492139.2| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Equus
caballus]
gi|345783918|ref|XP_533186.3| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Canis lupus
familiaris]
gi|410973721|ref|XP_003993296.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Felis catus]
Length = 482
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 371 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 429
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 430 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|197099692|ref|NP_001125976.1| CUGBP Elav-like family member 1 [Pongo abelii]
gi|75070672|sp|Q5R995.1|CELF1_PONAB RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|55729876|emb|CAH91665.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 55/83 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +IL G S+GCA + + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILWGPDGLSRGCALVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|149022602|gb|EDL79496.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 513
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|38570086|ref|NP_059064.2| CUGBP Elav-like family member 1 isoform 1 [Mus musculus]
gi|148695567|gb|EDL27514.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Mus
musculus]
Length = 513
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|403255513|ref|XP_003920470.1| PREDICTED: CUGBP Elav-like family member 1 [Saimiri boliviensis
boliviensis]
Length = 597
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 486 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 544
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 545 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 597
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 279 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 338
Query: 61 ME 62
ME
Sbjct: 339 ME 340
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 189 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 245
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 246 HNMKVLPGMHHPIQMKPADSEKNNVEDR 273
>gi|338712050|ref|XP_003362651.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 3 [Equus
caballus]
gi|410973719|ref|XP_003993295.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Felis catus]
Length = 486
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|281340493|gb|EFB16077.1| hypothetical protein PANDA_010600 [Ailuropoda melanoleuca]
Length = 486
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|417411512|gb|JAA52190.1| Putative rna-binding protein etr-3 rrm superfamily, partial
[Desmodus rotundus]
Length = 541
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 430 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 488
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 541
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 169 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 228
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 229 MEGCSSPMVVKFADTQKDKEQKR 251
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 78 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 134
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 135 HNMKVLPGMHHPIQMKPADSEK 156
>gi|410045110|ref|XP_003313076.2| PREDICTED: CUGBP Elav-like family member 1 [Pan troglodytes]
Length = 461
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 350 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 408
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 409 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 461
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|383415257|gb|AFH30842.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939406|gb|AFI33308.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384944856|gb|AFI36033.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410222888|gb|JAA08663.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259328|gb|JAA17630.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259330|gb|JAA17631.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298512|gb|JAA27856.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298514|gb|JAA27857.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357300|gb|JAA44561.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357302|gb|JAA44562.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357304|gb|JAA44563.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 513
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|119588314|gb|EAW67908.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Homo
sapiens]
gi|355566554|gb|EHH22933.1| hypothetical protein EGK_06290 [Macaca mulatta]
gi|355752163|gb|EHH56283.1| hypothetical protein EGM_05659 [Macaca fascicularis]
Length = 514
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 403 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 461
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|289547566|ref|NP_001166110.1| CUGBP Elav-like family member 1 isoform 4 [Homo sapiens]
gi|109106411|ref|XP_001106041.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 4 [Macaca
mulatta]
gi|296218064|ref|XP_002755281.1| PREDICTED: CUGBP Elav-like family member 1 [Callithrix jacchus]
gi|332259914|ref|XP_003279029.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|397488336|ref|XP_003815223.1| PREDICTED: CUGBP Elav-like family member 1 [Pan paniscus]
gi|402893566|ref|XP_003909963.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Papio anubis]
gi|168275618|dbj|BAG10529.1| CUG triplet repeat RNA-binding protein 1 [synthetic construct]
Length = 512
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 140 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 MEGCSSPMVVKFADTQKDKEQKR 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEKNNVEDR 134
>gi|70794748|ref|NP_001020592.1| CUGBP Elav-like family member 1 [Rattus norvegicus]
gi|81918148|sp|Q4QQT3.1|CELF1_RAT RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|67678292|gb|AAH98012.1| CUG triplet repeat, RNA binding protein 1 [Rattus norvegicus]
Length = 487
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|149022603|gb|EDL79497.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 486
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|12852385|dbj|BAB29392.1| unnamed protein product [Mus musculus]
gi|148695566|gb|EDL27513.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Mus
musculus]
Length = 487
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|38570084|ref|NP_941955.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349585220|ref|NP_001231820.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349732093|ref|NP_001231832.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|19857900|sp|P28659.2|CELF1_MOUSE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Brain protein F41; AltName:
Full=Bruno-like protein 2; AltName: Full=CUG triplet
repeat RNA-binding protein 1; Short=CUG-BP1; AltName:
Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=Deadenylation factor CUG-BP; AltName:
Full=Deadenylation factor EDEN-BP; AltName: Full=Embryo
deadenylation element-binding protein homolog;
Short=EDEN-BP homolog; AltName: Full=RNA-binding protein
BRUNOL-2
gi|12054715|emb|CAC20707.1| deadenylation factor EDEN-BP [Mus musculus]
Length = 486
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|289547568|ref|NP_001166111.1| CUGBP Elav-like family member 1 isoform 5 [Homo sapiens]
Length = 485
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 374 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 432
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 433 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 113 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 172
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 173 MEGCSSPMVVKFADTQKDKEQKR 195
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEKNNVEDR 107
>gi|71164871|ref|NP_001020767.1| CUGBP Elav-like family member 1 isoform 3 [Homo sapiens]
gi|17374605|sp|Q92879.2|CELF1_HUMAN RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Bruno-like protein 2; AltName:
Full=CUG triplet repeat RNA-binding protein 1;
Short=CUG-BP1; AltName: Full=CUG-BP- and ETR-3-like
factor 1; AltName: Full=Deadenylation factor CUG-BP;
AltName: Full=Embryo deadenylation element-binding
protein homolog; Short=EDEN-BP homolog; AltName:
Full=RNA-binding protein BRUNOL-2
gi|8745535|gb|AAF78955.1|AF267533_1 CUG-binding protein LYLQ isoform [Homo sapiens]
gi|9246973|gb|AAF86230.1|AF248648_1 RNA-binding protein BRUNOL2 [Homo sapiens]
gi|12053580|emb|CAC20566.1| deadenylation factor CUG-BP [Homo sapiens]
gi|119588315|gb|EAW67909.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|119588318|gb|EAW67912.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|387539216|gb|AFJ70235.1| CUGBP Elav-like family member 1 isoform 3 [Macaca mulatta]
Length = 486
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|119588312|gb|EAW67906.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Homo
sapiens]
Length = 487
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|194385764|dbj|BAG65257.1| unnamed protein product [Homo sapiens]
Length = 468
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 357 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 415
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 416 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 468
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 96 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 155
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 156 MEGCSSPMVVKFADTQKDKEQKR 178
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 6 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 62
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 63 HNMKVLPGMHHPIQMKPADSEKNNVEDR 90
>gi|8745539|gb|AAF78957.1|AF267535_1 CUG-binding protein LYLQ isoform [Mus musculus]
Length = 486
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|426368243|ref|XP_004051120.1| PREDICTED: CUGBP Elav-like family member 1 [Gorilla gorilla
gorilla]
Length = 551
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 440 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 498
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 551
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 47/129 (36%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQAL--------- 49
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL
Sbjct: 133 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNM 192
Query: 50 -----------------------------------AALEAINGKHKMEGSSVPLVVKWAD 74
A++A++ MEG S P+VVK+AD
Sbjct: 193 KVLPGMHHPIQMKPADSEKNNGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 252
Query: 75 TEKERQARR 83
T+K+++ +R
Sbjct: 253 TQKDKEQKR 261
>gi|68533093|dbj|BAE06101.1| CUGBP1 variant protein [Homo sapiens]
Length = 544
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 433 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 491
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 492 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 544
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 172 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 231
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 232 MEGCSSPMVVKFADTQKDKEQKR 254
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 82 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 138
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 139 HNMKVLPGMHHPIQMKPADSEKNNVEDR 166
>gi|444707599|gb|ELW48864.1| CUGBP Elav-like family member 1 [Tupaia chinensis]
Length = 487
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKH 59
M+ K +E ++ +FS +G I++ +ILRG S+G CAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQ 173
Query: 60 KMEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 TMEGCSSPMVVKFADTQKDKEQKR 197
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|12642586|gb|AAK00297.1|AF314172_1 BRUNOL2 [Mus musculus]
Length = 436
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 325 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 383
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 384 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 436
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 63 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 122
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 123 MEGCSSPMVVKFADTQKDKEQKR 145
>gi|148695568|gb|EDL27515.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
gi|148695569|gb|EDL27516.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
Length = 499
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 388 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 446
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 499
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 127 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 186
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 187 MEGCSSPMVVKFADTQKDKEQKR 209
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 36 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 92
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 93 HNMKVLPGMHHPIQMKPADSEK 114
>gi|223996717|ref|XP_002288032.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
gi|220977148|gb|EED95475.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
Length = 356
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 168/356 (47%), Gaps = 46/356 (12%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK ++E +++ LF YG I D+ ++R + T +GCAF+ YE+ E A+ + ++GK++
Sbjct: 9 VPKTLAEEDLALLFEPYGRILDMTVIRDRRTGTHRGCAFVTYESGEDAMRVVNEMHGKYR 68
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN----NLP-NADSQHP----SLFGALPMG 111
EG+ P V+ A E E + A LP AD + +G +
Sbjct: 69 FEGAMWPAQVRPAQGEIEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFTSYGDITGI 128
Query: 112 YA------PPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSS 165
Y NG + + Q + + + G+ P+ A
Sbjct: 129 YIIKKRNNEAKNGCAFVKFRERDMAQAAIDALDGEVHLEGVDKPIRVKFA--------DQ 180
Query: 166 NMGPRNY-AMPPSGFVGSGYPAVP-GLQYPMPYPGGMLGHRP---LNNSPGSVSPAVANS 220
N G ++ +M G G+ +P M + G ++G P + + PGS+SP +
Sbjct: 181 NKGQYHHRSMSGGGSRHPGHGVIPQAHDIYMNHRGHVVGAAPGYYMGHPPGSMSPVYPSP 240
Query: 221 NP-STSSSGGTGSGGQI----------------EGPPGANLFIYHIPQEFGDQELGNAFQ 263
+ S + GT + EGP GANLFIYH+P + D +L AF
Sbjct: 241 DEYSQHAHDGTPPAAMMTPGVHPPPLMVPARPREGPAGANLFIYHLPIDLTDADLATAFN 300
Query: 264 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
FG V+SAKV+VD+ TG SK FGFVSY+S +A+ AI MNG Q+G K+LKVQ KR
Sbjct: 301 PFGHVISAKVYVDRYTGESKGFGFVSYDSVMAAELAIEQMNGFQIGNKRLKVQHKR 356
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
LF+ +P+ +++L F+ +GR+L V D+ TG + FV+YES A +
Sbjct: 3 KLFVGQVPKTLAEEDLALLFEPYGRILDMTVIRDRRTGTHRGCAFVTYESGEDAMRVVNE 62
Query: 303 MNG 305
M+G
Sbjct: 63 MHG 65
>gi|351708216|gb|EHB11135.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 513
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFVPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKH 59
M+ K +E ++ +FS +G I++ +ILRG S+G CAF+ + T+ A A++A++
Sbjct: 140 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQ 199
Query: 60 KMEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 TMEGCSSPMVVKFADTQKDKEQKR 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEKNNVEDR 134
>gi|270016806|gb|EFA13252.1| hypothetical protein TcasGA2_TC001522 [Tribolium castaneum]
Length = 307
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 150/324 (46%), Gaps = 83/324 (25%)
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 121
+G+S LVVK+ADTEKERQ R + Q A N+ + + FGA Y Y
Sbjct: 9 KGASSSLVVKFADTEKERQLR---RMQQMAGNMSLLNPFVFNQFGA--------YGAYAQ 57
Query: 122 QA---------------SGSY----GLMQYRLPPMQNQPGFHGIIPPVNQ-------GNA 155
+ G+Y + ++P + ++PP + G
Sbjct: 58 HSLDFQQQAALMAAATAQGTYINPMAALATQIPHATLNGMANSVVPPTSDVGVGAGSGQP 117
Query: 156 MRGASPDLSS------NMG-------------------PRNYAMP---PSGFVGSGYPAV 187
+ GA P L S NM P+ Y P P+G + A
Sbjct: 118 VNGAIPSLPSPTMPTFNMAAQTPNGQPGGTEAVYTNGIPQTYPAPQGLPNGEAALQHAAY 177
Query: 188 PGLQYPMPYPG----GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGAN 243
PG+Q PYPG + G P A P ++ + G I GP G N
Sbjct: 178 PGMQ---PYPGVAYPAVYGQFPQ-----------AIPQPMSAVAPAQREGCSISGPEGCN 223
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI M
Sbjct: 224 LFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAM 283
Query: 304 NGCQLGGKKLKVQLKRDNKQNKPY 327
NG Q+G K+LKVQLKR N+PY
Sbjct: 284 NGFQIGMKRLKVQLKRPKDANRPY 307
>gi|74150748|dbj|BAE25504.1| unnamed protein product [Mus musculus]
Length = 486
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG ++G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFRIGMKRLKVQLKRSKNDSKPY 486
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|149632715|ref|XP_001509363.1| PREDICTED: CUGBP Elav-like family member 1 [Ornithorhynchus
anatinus]
Length = 513
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCNENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRSMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPIVVKFADTQKDKEQKR 223
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|449502234|ref|XP_002199924.2| PREDICTED: CUGBP Elav-like family member 1 [Taeniopygia guttata]
Length = 485
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 374 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 432
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 433 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ E ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKILPGMHHPIQMKPADSEK 101
>gi|391337388|ref|XP_003743051.1| PREDICTED: CUGBP Elav-like family member 2-like [Metaseiulus
occidentalis]
Length = 512
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 74/96 (77%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G QIEGP GANLFIYH+PQEF D +L AF FG+V+SAKVF+DK T +SKCFGFVSY
Sbjct: 417 AGKQIEGPDGANLFIYHLPQEFADIDLVQAFMPFGQVISAKVFIDKQTNLSKCFGFVSYA 476
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SP SAQ AI MNG Q+G K+LKVQLKR Q PY
Sbjct: 477 SPVSAQAAIQSMNGFQIGAKRLKVQLKRSKDQGTPY 512
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E++V +FS +GTI++ +LR Q SKGCAF+ Y T++ A+ A++++N
Sbjct: 151 MLSKECDESDVRLMFSSFGTIEECTVLRDGQGQSKGCAFVTYSTRQCAINAIKSMNHSQT 210
Query: 61 MEGSSVPLVVKWADT 75
M+G S PLVVK+ADT
Sbjct: 211 MKGCSNPLVVKFADT 225
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
+F+ IP+ + + EL N F+ FG+V S V DKATG S+ FV++ + SA +A +
Sbjct: 60 MFVGQIPRNWDENELRNLFEEFGKVHSINVLRDKATGNSRGCCFVTFYTRKSALDAQNDL 119
Query: 304 NGCQ-LGGKKLKVQLKRDNKQNK 325
+ + L G +Q+K + +N+
Sbjct: 120 HNIKTLPGMHHPIQMKPADSENR 142
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N E E+ LF +G + + +LR S+GC F+ + T++ AL A ++
Sbjct: 65 IPRNWDENELRNLFEEFGKVHSINVLRDKATGNSRGCCFVTFYTRKSALDAQNDLHNIKT 124
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 125 LPGMHHPIQMKPADSENRNERK 146
>gi|387015318|gb|AFJ49778.1| CUGBP Elav-like family member 1-like [Crotalus adamanteus]
Length = 511
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 400 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 458
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 511
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRSWSEKDLRDLFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKILPGMHHPIQMKPADSEK 128
>gi|60302694|ref|NP_001012539.1| CUGBP Elav-like family member 1 [Gallus gallus]
gi|60098733|emb|CAH65197.1| hypothetical protein RCJMB04_7f23 [Gallus gallus]
Length = 485
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 374 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 432
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 433 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ E ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKILPGMHHPIQMKPADSEK 101
>gi|426245410|ref|XP_004016504.1| PREDICTED: CUGBP Elav-like family member 1 [Ovis aries]
Length = 486
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQSLLTQQSVG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|152013389|sp|Q5F3T7.2|CELF1_CHICK RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
Length = 489
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 378 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 436
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 437 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKR 196
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ E ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKILPGMHHPIQMKPADSEK 101
>gi|449274607|gb|EMC83685.1| CUG-BP- and ETR-3-like factor 1 [Columba livia]
Length = 515
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 404 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 462
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 463 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 515
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 141 MISKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPIVVKFADTQKDKEQKR 223
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ E ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKILPGMHHPIQMKPADSEK 128
>gi|327259665|ref|XP_003214656.1| PREDICTED: CUGBP Elav-like family member 1-like [Anolis
carolinensis]
Length = 514
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 403 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 461
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 140 MISKKCNENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 MEGCSSPIVVKFADTQKDKEQKR 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 107 HNMKILPGMHHPIQMKPADSEKNNVEDR 134
>gi|62857945|ref|NP_001017152.1| CUGBP Elav-like family member 1 [Xenopus (Silurana) tropicalis]
gi|123910258|sp|Q28HE9.1|CELF1_XENTR RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|89272922|emb|CAJ82289.1| CUG triplet repeat, RNA binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 490
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 221 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T
Sbjct: 383 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQT 442
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 443 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|326920382|ref|XP_003206453.1| PREDICTED: CUGBP Elav-like family member 1-like [Meleagris
gallopavo]
Length = 487
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 113 MISKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 172
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 173 MEGCSSPIVVKFADTQKDKEQKR 195
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ E ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 80 HNMKILPGMHHPIQMKPADSEKNNVEDR 107
>gi|145306680|gb|ABP57104.1| CUG binding protein 1 [Gallus gallus]
Length = 487
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 113 MISKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 172
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 173 MEGCSSPIVVKFADTQKDKEQKR 195
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ E ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 80 HNMKILPGMHHPIQMKPADSEKNNVEDR 107
>gi|440903464|gb|ELR54119.1| CUGBP Elav-like family member 1 [Bos grunniens mutus]
Length = 512
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 401 PTLYNQNLLAQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 459
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 140 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 MEGCSSPMVVKFADTQKDKEQKR 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEKERQARR 83
H M+ G P+ +K AD+EK R
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEKNNVEDR 134
>gi|74148402|dbj|BAE36341.1| unnamed protein product [Mus musculus]
Length = 238
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 141 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 200
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 201 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 238
>gi|155372145|ref|NP_001094682.1| CUGBP Elav-like family member 1 [Bos taurus]
gi|154425935|gb|AAI51434.1| CUGBP1 protein [Bos taurus]
gi|296479665|tpg|DAA21780.1| TPA: CUG triplet repeat, RNA-binding protein 1 [Bos taurus]
Length = 486
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLAQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|194380292|dbj|BAG63913.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 183 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 242
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 243 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 280
>gi|324507732|gb|ADY43273.1| CUGBP Elav family member 1-A [Ascaris suum]
gi|324510717|gb|ADY44479.1| CUGBP Elav family member 1-A, partial [Ascaris suum]
Length = 594
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Query: 217 VANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVD 276
V + P+ S T SGGQ +GP G NLFIYH+PQ+F D +L F FG +LSAKVF+D
Sbjct: 468 VNAATPTMSVVTSTTSGGQSKGPDGCNLFIYHLPQDFADSDLVTTFSPFGNILSAKVFID 527
Query: 277 KATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
K T +SKCFGFVSY++ SAQNAIA +NG Q+G K+LKVQLKR K +KPY
Sbjct: 528 KQTNLSKCFGFVSYDNAVSAQNAIAALNGFQIGSKRLKVQLKR-GKDSKPY 577
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V A+F+ +G I+D +L+ S S+GCAF+ + + A A+ ++
Sbjct: 130 MLNKRLTEEDVKAMFAHFGHIEDCTVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQT 189
Query: 61 MEGSSVPLVVKWADTEKERQARRA 84
MEG S P+VVK+ADT+KE++A++
Sbjct: 190 MEGCSTPIVVKFADTQKEKEAKKT 213
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
P +F+ IP+ +G+QE F+ FG V V DK T S+ FV++
Sbjct: 34 PDTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTF 85
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P++ E E LF +G++ L +LR + Q S+GC F+ + + A+AA A++
Sbjct: 44 IPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTFYRRADAIAAQAALHNIRV 103
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ P+ +K AD+E + +
Sbjct: 104 LPQMHHPVQMKPADSENRNERK 125
>gi|9581852|gb|AAF89096.1|AF169013_1 RNA binding protein NAPOR-3, partial [Rattus norvegicus]
Length = 226
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 129 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 188
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 189 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 226
>gi|324508266|gb|ADY43493.1| CUGBP Elav family member 1-A [Ascaris suum]
Length = 539
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Query: 217 VANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVD 276
V + P+ S T SGGQ +GP G NLFIYH+PQ+F D +L F FG +LSAKVF+D
Sbjct: 413 VNAATPTMSVVTSTTSGGQSKGPDGCNLFIYHLPQDFADSDLVTTFSPFGNILSAKVFID 472
Query: 277 KATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
K T +SKCFGFVSY++ SAQNAIA +NG Q+G K+LKVQLKR K +KPY
Sbjct: 473 KQTNLSKCFGFVSYDNAVSAQNAIAALNGFQIGSKRLKVQLKR-GKDSKPY 522
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V A+F+ +G I+D +L+ S S+GCAF+ + + A A+ ++
Sbjct: 130 MLNKRLTEEDVKAMFAHFGHIEDCTVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQT 189
Query: 61 MEGSSVPLVVKWADTEKERQARRA 84
MEG S P+VVK+ADT+KE++A++
Sbjct: 190 MEGCSTPIVVKFADTQKEKEAKKT 213
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
P +F+ IP+ +G+QE F+ FG V V DK T S+ FV++
Sbjct: 34 PDTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTF 85
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P++ E E LF +G++ L +LR + Q S+GC F+ + + A+AA A++
Sbjct: 44 IPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTFYRRADAIAAQAALHNIRV 103
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ P+ +K AD+E + +
Sbjct: 104 LPQMHHPVQMKPADSENRNERK 125
>gi|194386824|dbj|BAG59778.1| unnamed protein product [Homo sapiens]
Length = 314
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 217 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 276
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 277 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 314
>gi|148224750|ref|NP_001079970.1| CUGBP Elav-like family member 1-B [Xenopus laevis]
gi|47123025|gb|AAH70706.1| Cugbp1-b protein [Xenopus laevis]
Length = 529
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 221 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T
Sbjct: 422 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQT 481
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGF+SY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 482 NLSKCFGFISYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 529
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ LFS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 154 MVSKKCNENDIRTLFSQFGQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQT 213
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFG 106
MEG S P+VVK+ADT+K+++ +R + Q NA S +L G
Sbjct: 214 MEGCSSPIVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLAG 259
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>gi|355677605|gb|AER96037.1| CUG triplet repeat, RNA binding protein 1 [Mustela putorius furo]
Length = 540
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 430 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 488
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 326
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KP
Sbjct: 489 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKP 540
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 169 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 228
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 229 MEGCSSPMVVKFADTQKDKEQKR 251
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 78 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 134
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 135 HNMKVLPGMHHPIQMKPADSEK 156
>gi|194380550|dbj|BAG58428.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 306 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 365
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 366 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 403
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 27 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 86
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 87 MEGCSSPIVVKFADTQKDKE 106
>gi|431917652|gb|ELK16917.1| CUG-BP- and ETR-3-like factor 2 [Pteropus alecto]
Length = 443
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 346 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 405
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 406 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 443
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|134152696|ref|NP_058893.2| CUGBP Elav-like family member 2 isoform 1 [Rattus norvegicus]
gi|3451291|emb|CAA09103.1| ETR-R3b protein [Rattus norvegicus]
Length = 532
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|348575365|ref|XP_003473460.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Cavia
porcellus]
Length = 532
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|156717754|ref|NP_001096417.1| CUGBP Elav-like family member 2 [Xenopus (Silurana) tropicalis]
gi|152013392|sp|A4IIM2.1|CELF2_XENTR RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|134024252|gb|AAI36077.1| LOC100125022 protein [Xenopus (Silurana) tropicalis]
Length = 513
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 416 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 475
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 476 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 133 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 192
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 193 MEGCSSPIVVKFADTQKDKE 212
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 42 IPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 101
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 102 KTLPGMHHPIQMKPADSEK 120
>gi|350589633|ref|XP_003482886.1| PREDICTED: CUGBP Elav-like family member 2-like [Sus scrofa]
Length = 270
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 175 AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 234
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 235 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 270
>gi|441625924|ref|XP_003257673.2| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Nomascus
leucogenys]
Length = 523
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 426 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 485
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 486 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 523
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG---CAFLKYETKEQALAALEAING 57
M+ K +E ++ +FS +G I++ +ILRG S+G CAF+ + T+ A A++A++
Sbjct: 150 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGNSSCAFVTFSTRAMAQNAIKAMHQ 209
Query: 58 KHKMEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 210 SQTMEGCSSPIVVKFADTQKDKE 232
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 59 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 118
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 119 KTLPGMHHPIQMKPADSEK 137
>gi|358414907|ref|XP_003582947.1| PREDICTED: CUGBP Elav-like family member 2-like [Bos taurus]
Length = 398
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 301 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 360
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 361 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 398
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 24 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 83
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 84 MEGCSSPIVVKFADTQKDKE 103
>gi|355562286|gb|EHH18880.1| hypothetical protein EGK_19447, partial [Macaca mulatta]
gi|355782632|gb|EHH64553.1| hypothetical protein EGM_17798, partial [Macaca fascicularis]
Length = 433
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 336 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 395
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 396 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 433
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 57 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 116
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 117 MEGCSSPIVVKFADTQKDKE 136
>gi|159032031|ref|NP_001103698.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|237757271|ref|NP_001153765.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|285026421|ref|NP_001077055.2| CUGBP Elav-like family member 2 isoform 2 [Rattus norvegicus]
gi|148676041|gb|EDL07988.1| CUG triplet repeat, RNA binding protein 2 [Mus musculus]
gi|149021034|gb|EDL78641.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
gi|149021035|gb|EDL78642.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 526
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|82237708|sp|Q6PF35.1|CEL1B_XENLA RecName: Full=CUGBP Elav-like family member 1-B; Short=CELF-1B;
AltName: Full=Bruno-like protein 2-B; AltName: Full=CUG
triplet repeat RNA-binding protein 1-B; Short=CUG-BP1-B;
AltName: Full=CUG-BP- and ETR-3-like factor 1-B;
AltName: Full=Embryo deadenylation element-binding
protein B; Short=EDEN-BP-B; AltName: Full=RNA-binding
protein BRUNOL-2-B; AltName: Full=p53/p55
gi|34784678|gb|AAH57743.1| Cugbp1-b protein [Xenopus laevis]
Length = 489
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 221 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T
Sbjct: 382 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQT 441
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGF+SY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 442 NLSKCFGFISYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ LFS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRTLFSQFGQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFG 106
MEG S P+VVK+ADT+K+++ +R + Q NA S +L G
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLAG 219
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|348575361|ref|XP_003473458.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Cavia
porcellus]
Length = 526
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|291401988|ref|XP_002717491.1| PREDICTED: CUG triplet repeat, RNA binding protein 2-like
[Oryctolagus cuniculus]
Length = 532
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|159032033|ref|NP_001103699.1| CUGBP Elav-like family member 2 isoform 2 [Mus musculus]
gi|74209492|dbj|BAE23295.1| unnamed protein product [Mus musculus]
Length = 524
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 427 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 486
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 487 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 524
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 150 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 209
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 210 MEGCSSPIVVKFADTQKDKE 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 59 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 118
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 119 KTLPGMHHPIQMKPADSEK 137
>gi|348545316|ref|XP_003460126.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 2
[Oreochromis niloticus]
Length = 485
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 388 SAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 447
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 448 YDNPVSSQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + ++ A +A+++++
Sbjct: 114 MISKKCNENDIRLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ +R + Q +A S +L G +G P Y
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKRMAQQLQQQMQQLSAASMWGNLTGLNSLG--PQYLALL 231
Query: 121 YQASGS 126
+Q++ +
Sbjct: 232 HQSAST 237
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE ++ LF YG + ++ +LR Q SKGC F+ Y +++ AL A A++
Sbjct: 23 IPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYSRKSALEAQNALHNM 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KILPGMHHPIQMKPADSEK 101
>gi|74140245|dbj|BAE33820.1| unnamed protein product [Mus musculus]
Length = 486
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GA LFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGAYLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|194388952|dbj|BAG61493.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|395539007|ref|XP_003771465.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Sarcophilus
harrisii]
Length = 526
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|332833593|ref|XP_003312501.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Pan
troglodytes]
gi|397515222|ref|XP_003827855.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Pan paniscus]
gi|403278083|ref|XP_003930658.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|380808894|gb|AFE76322.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
Length = 514
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|395827351|ref|XP_003786868.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Otolemur
garnettii]
Length = 514
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|301787201|ref|XP_002929016.1| PREDICTED: CUGBP Elav-like family member 2-like [Ailuropoda
melanoleuca]
Length = 488
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|268533976|ref|XP_002632118.1| C. briggsae CBR-ETR-1 protein [Caenorhabditis briggsae]
Length = 574
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 77/98 (78%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
+T+SSG G + GP GANLFIYH+PQ+FGD +L N F FG++LSAKVF+DK T +S
Sbjct: 470 ATTSSGQLVGNGDVRGPDGANLFIYHLPQDFGDTDLINTFAPFGQILSAKVFIDKVTNLS 529
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
KC+GFVSYE+P SA NAIA MNG Q+G K+LKVQLK D
Sbjct: 530 KCYGFVSYETPQSANNAIAAMNGFQIGSKRLKVQLKVD 567
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E + +F+ +G I+D +LR + S+GCAF+ + + A+ A + ++ M
Sbjct: 146 LSKKHNEENLREIFAKFGLIEDCSVLRDNDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 205
Query: 62 EGSSVPLVVKWADTEKERQAR 82
EG S PLVVK+ADT+K++ +
Sbjct: 206 EGCSAPLVVKFADTQKDKDVK 226
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E + LF YG++ ILR S QTSKGC F+ + ++ A+ A A++
Sbjct: 59 IPRQWNEVDCRRLFEQYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGALHNIKV 118
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K ADTE + +
Sbjct: 119 IDGMHHPVQMKPADTENRNERK 140
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 302
+F+ IP+++ + + F+ +G V S + DK+T SK FV++ A A A+
Sbjct: 54 MFVGQIPRQWNEVDCRRLFEQYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGAL 113
Query: 303 MNGCQLGGKKLKVQLKRDNKQNK 325
N + G VQ+K + +N+
Sbjct: 114 HNIKVIDGMHHPVQMKPADTENR 136
>gi|159032035|ref|NP_001103700.1| CUGBP Elav-like family member 2 isoform 3 [Mus musculus]
gi|74227938|dbj|BAE37963.1| unnamed protein product [Mus musculus]
Length = 520
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 423 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 482
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 483 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 520
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 150 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 209
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 210 MEGCSSPIVVKFADTQKDKE 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 59 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 118
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 119 KTLPGMHHPIQMKPADSEK 137
>gi|348545314|ref|XP_003460125.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 1
[Oreochromis niloticus]
Length = 509
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSSQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 58/83 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + ++ A +A+++++
Sbjct: 140 MISKKCNENDIRLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 MEGCSSPIVVKFADTQKDKEQKR 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE ++ LF YG + ++ +LR Q SKGC F+ Y +++ AL A A++
Sbjct: 50 IPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYSRKSALEAQNALHNM 109
Query: 59 HKMEGSSVPLVVKWADTEKERQARR 83
+ G P+ +K AD+EK R
Sbjct: 110 KILPGMHHPIQMKPADSEKNNVEDR 134
>gi|402879617|ref|XP_003903428.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Papio anubis]
Length = 533
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 436 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 495
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 496 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 533
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 145 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 205 MEGCSSPIVVKFADTQKDKE 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 54 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 113
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 114 KTLPGMHHPIQMKPADSEK 132
>gi|395827349|ref|XP_003786867.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Otolemur
garnettii]
Length = 490
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|228480217|ref|NP_001153184.1| CUGBP Elav-like family member 2 isoform 1 [Pongo abelii]
gi|55733625|emb|CAH93489.1| hypothetical protein [Pongo abelii]
Length = 514
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECWILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQIDVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|29436780|gb|AAH49453.1| Cugbp1 protein [Danio rerio]
Length = 534
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 437 SAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 496
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 497 YDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 534
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+ CAF+ + ++ A +A+++++
Sbjct: 152 MISKKCNENDIRLMFSPYGQIEECRILRGPDGLSR-CAFVTFTARQMAQSAIKSMHQSQT 210
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ +R + Q NA S +L G +G P Y
Sbjct: 211 MEGCSSPIVVKFADTQKDKEQKRIAQQLQQQMQQLNAASMWGNLTGLNSLG--PQYLAL- 267
Query: 121 YQASGSYGLMQYRLPPM 137
Q S S G L PM
Sbjct: 268 LQQSASSGNALNNLHPM 284
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ Y T++ AL A A++
Sbjct: 61 IPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQNALHNM 120
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 121 KILPGMHHPIQMKPADSEK 139
>gi|338721613|ref|XP_003364408.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Equus
caballus]
gi|345793484|ref|XP_857942.2| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Canis lupus
familiaris]
Length = 514
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|148225362|ref|NP_001079593.1| CUGBP Elav-like family member 2 [Xenopus laevis]
gi|82241541|sp|Q7ZXE2.1|CELF2_XENLA RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|27924438|gb|AAH45035.1| Cugbp2-A-prov protein [Xenopus laevis]
Length = 536
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|395539011|ref|XP_003771467.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Sarcophilus
harrisii]
Length = 536
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|380808892|gb|AFE76321.1| CUGBP Elav-like family member 2 isoform 2 [Macaca mulatta]
Length = 515
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 418 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 477
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 478 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 515
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 145 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 205 MEGCSSPIVVKFADTQKDKE 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 54 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 113
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 114 KTLPGMHHPIQMKPADSEK 132
>gi|194375526|dbj|BAG56708.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 399 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 458
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 496
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 122 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 181
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 182 MEGCSSPIVVKFADTQKDKE 201
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 31 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 90
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 91 KTLPGMHHPIQMKPADSEK 109
>gi|410963191|ref|XP_003988149.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Felis catus]
Length = 514
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|410225364|gb|JAA09901.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263770|gb|JAA19851.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263772|gb|JAA19852.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305936|gb|JAA31568.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349365|gb|JAA41286.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 519
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 422 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 481
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 482 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 519
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 145 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 205 MEGCSSPIVVKFADTQKDKE 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 54 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 113
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 114 KTLPGMHHPIQMKPADSEK 132
>gi|402879615|ref|XP_003903427.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Papio anubis]
Length = 521
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 145 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 205 MEGCSSPIVVKFADTQKDKE 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 54 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 113
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 114 KTLPGMHHPIQMKPADSEK 132
>gi|332833599|ref|XP_507653.3| PREDICTED: CUGBP, Elav-like family member 2 isoform 4 [Pan
troglodytes]
gi|410349369|gb|JAA41288.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 521
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 145 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 205 MEGCSSPIVVKFADTQKDKE 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 54 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 113
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 114 KTLPGMHHPIQMKPADSEK 132
>gi|351703688|gb|EHB06607.1| CUG-BP- and ETR-3-like factor 2, partial [Heterocephalus glaber]
Length = 496
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 399 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 458
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 496
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 120 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 179
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 180 MEGCSSPIVVKFADTQKDKE 199
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 29 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 88
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 89 KTLPGMHHPIQMKPADSEK 107
>gi|334348392|ref|XP_001367508.2| PREDICTED: CUGBP Elav-like family member 2-like [Monodelphis
domestica]
Length = 575
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 478 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 537
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 538 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 575
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++ ++
Sbjct: 199 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKTMHQSQT 258
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 259 MEGCSSPIVVKFADTQKDKE 278
>gi|134152680|ref|NP_006552.3| CUGBP Elav-like family member 2 isoform 2 [Homo sapiens]
gi|348575363|ref|XP_003473459.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Cavia
porcellus]
Length = 521
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 145 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 205 MEGCSSPIVVKFADTQKDKE 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 54 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 113
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 114 KTLPGMHHPIQMKPADSEK 132
>gi|18858491|ref|NP_571688.1| CUGBP Elav-like family member 1 [Danio rerio]
gi|82247731|sp|Q9IBD0.1|CELF1_DANRE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=EDEN-BP/Bruno-like protein; AltName:
Full=RNA-binding protein BRUNOL-2
gi|7670538|dbj|BAA95119.1| brul [Danio rerio]
Length = 501
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 404 SAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 463
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 464 YDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + ++ A +A+++++
Sbjct: 114 MISKKCNENDIRLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMG 111
MEG S P+VVK+ADT+K+++ +R + Q NA S +L G +G
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKRIAQQLQQQMQQLNAASMWGNLTGLNSLG 224
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ Y T++ AL A A++
Sbjct: 23 IPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQNALHNM 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KILPGMHHPIQMKPADSEK 101
>gi|395827347|ref|XP_003786866.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Otolemur
garnettii]
Length = 521
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 145 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 205 MEGCSSPIVVKFADTQKDKE 224
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 54 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 113
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 114 KTLPGMHHPIQMKPADSEK 132
>gi|189054263|dbj|BAG36783.1| unnamed protein product [Homo sapiens]
Length = 509
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 133 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 192
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 193 MEGCSSPIVVKFADTQKDKE 212
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 42 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 101
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 102 KTLPGMHHPIQMKPADSEK 120
>gi|119606755|gb|EAW86349.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 509
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 133 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 192
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 193 MEGCSSPIVVKFADTQKDKE 212
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 42 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 101
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 102 KTLPGMHHPIQMKPADSEK 120
>gi|402879613|ref|XP_003903426.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Papio anubis]
gi|426363973|ref|XP_004049101.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Gorilla
gorilla gorilla]
gi|14701777|gb|AAK72223.1| neuroplastoma apoptosis-related RNA-binding protein 3 [Homo
sapiens]
gi|194390100|dbj|BAG61812.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|68303647|ref|NP_001020248.1| CUGBP Elav-like family member 2 isoform 3 [Homo sapiens]
gi|402879611|ref|XP_003903425.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Papio anubis]
gi|426363975|ref|XP_004049102.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Gorilla
gorilla gorilla]
gi|74754421|sp|O95319.1|CELF2_HUMAN RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=Neuroblastoma apoptosis-related
RNA-binding protein; Short=hNAPOR; AltName:
Full=RNA-binding protein BRUNOL-3
gi|152013391|sp|Q5R8Y8.2|CELF2_PONAB RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=RNA-binding protein BRUNOL-3
gi|4249666|gb|AAD13760.1| apoptosis-related RNA binding protein [Homo sapiens]
gi|119606756|gb|EAW86350.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_e [Homo
sapiens]
gi|380808896|gb|AFE76323.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|380808898|gb|AFE76324.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|410349367|gb|JAA41287.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 508
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|326911121|ref|XP_003201910.1| PREDICTED: CUGBP Elav-like family member 2-like [Meleagris
gallopavo]
Length = 526
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|194227176|ref|XP_001916706.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Equus
caballus]
gi|344277695|ref|XP_003410635.1| PREDICTED: CUGBP Elav-like family member 2-like [Loxodonta
africana]
gi|345793487|ref|XP_003433765.1| PREDICTED: CUGBP, Elav-like family member 2 [Canis lupus
familiaris]
Length = 488
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|14701786|gb|AAK72224.1| neuroplastoma apoptosis-related RNA-binding protein 2 [Homo
sapiens]
Length = 509
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 133 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 192
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 193 MEGCSSPIVVKFADTQKDKE 212
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 42 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 101
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 102 KTLPGMHHPIQMKPADSEK 120
>gi|45383614|ref|NP_989591.1| CUGBP Elav-like family member 2 [Gallus gallus]
gi|31747199|gb|AAP57761.1| ELAV-type RNA-binding protein 3 variant 4 [Gallus gallus]
Length = 488
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|159032039|ref|NP_001103702.1| CUGBP Elav-like family member 2 isoform 5 [Mus musculus]
gi|4249672|gb|AAD13763.1| apoptosis-related RNA binding protein [Mus musculus]
gi|120538103|gb|AAI29097.1| Cugbp2 protein [Rattus norvegicus]
Length = 484
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|148228597|ref|NP_001084196.1| CUGBP Elav-like family member 1-A [Xenopus laevis]
gi|82227733|sp|O57406.1|CEL1A_XENLA RecName: Full=CUGBP Elav-like family member 1-A; Short=CELF-1A;
AltName: Full=Bruno-like protein 2-A; AltName: Full=CUG
triplet repeat RNA-binding protein 1-A; Short=CUG-BP1-A;
AltName: Full=CUG-BP- and ETR-3-like factor 1-A;
AltName: Full=Embryo deadenylation element-binding
protein A; Short=EDEN-BP-A; AltName: Full=RNA-binding
protein BRUNOL-2-A; AltName: Full=p53/p55
gi|2781419|gb|AAC41243.1| embryo deadenylation element binding protein [Xenopus laevis]
gi|80478529|gb|AAI08575.1| CUGBP1 protein [Xenopus laevis]
Length = 489
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 221 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG V+S+KVF+DK T
Sbjct: 382 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQT 441
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 442 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ KN +E ++ A+FS +G I++ +ILRG S+GCAF+ + T+ A A+++++
Sbjct: 114 MVSKNCNENDIRAMFSPFGQIEECRILRGPDGMSRGCAFVTFTTRSMAQMAIKSMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFG 106
MEG S P+VVK+ADT+K+++ +R + Q NA S +L G
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLTG 219
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|410225362|gb|JAA09900.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263776|gb|JAA19854.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305934|gb|JAA31567.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305938|gb|JAA31569.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349361|gb|JAA41284.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349363|gb|JAA41285.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 515
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 418 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 477
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 478 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 515
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 145 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 205 MEGCSSPIVVKFADTQKDKE 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 54 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 113
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 114 KTLPGMHHPIQMKPADSEK 132
>gi|327272092|ref|XP_003220820.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Anolis
carolinensis]
Length = 536
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|197100912|ref|NP_001126925.1| CUGBP Elav-like family member 2 isoform 2 [Pongo abelii]
gi|55733179|emb|CAH93273.1| hypothetical protein [Pongo abelii]
Length = 484
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVSFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|81911882|sp|Q792H5.1|CELF2_RAT RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=Protein ETR-R3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=rNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|81917931|sp|Q9Z0H4.1|CELF2_MOUSE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=mETR-3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=mNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|4249670|gb|AAD13762.1| apoptosis-related RNA binding protein [Rattus norvegicus]
gi|4249674|gb|AAD13764.1| apoptosis-related RNA binding protein [Mus musculus]
gi|20073073|gb|AAH26856.1| Cugbp2 protein [Mus musculus]
Length = 508
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|395827353|ref|XP_003786869.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Otolemur
garnettii]
Length = 488
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|22137759|gb|AAH36391.1| CUGBP2 protein [Homo sapiens]
gi|119606753|gb|EAW86347.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 521
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 133 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 192
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 193 MEGCSSPIVVKFADTQKDKE 212
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 42 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 101
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 102 KTLPGMHHPIQMKPADSEK 120
>gi|327272094|ref|XP_003220821.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Anolis
carolinensis]
Length = 488
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|449480621|ref|XP_002190740.2| PREDICTED: CUGBP Elav-like family member 2 [Taeniopygia guttata]
Length = 490
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|73949074|ref|XP_849139.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Canis lupus
familiaris]
gi|338721615|ref|XP_003364409.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Equus
caballus]
Length = 484
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|68303645|ref|NP_001020247.1| CUGBP Elav-like family member 2 isoform 1 [Homo sapiens]
gi|332833597|ref|XP_003312503.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Pan
troglodytes]
gi|397515224|ref|XP_003827856.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Pan paniscus]
gi|403278087|ref|XP_003930660.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Saimiri
boliviensis boliviensis]
gi|4104559|gb|AAD02074.1| neuroblastoma apoptosis-related RNA binding protein [Homo sapiens]
gi|15217394|gb|AAK92699.1| neuroplastoma apoptosis-related RNA-binding protein 1 [Homo
sapiens]
gi|119606754|gb|EAW86348.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_c [Homo
sapiens]
Length = 490
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|410963193|ref|XP_003988150.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Felis catus]
Length = 496
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 399 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 458
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 496
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 122 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 181
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 182 MEGCSSPIVVKFADTQKDKE 201
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 31 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 90
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 91 KTLPGMHHPIQMKPADSEK 109
>gi|82237387|sp|Q6P0B1.1|CELF2_DANRE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|41351000|gb|AAH65686.1| Cugbp2 protein [Danio rerio]
Length = 514
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 476
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 142 MVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 201
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ S SL G G P Y
Sbjct: 202 MEGCSSPMVVKFADTQKDKEQRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALL 259
Query: 121 YQASGSYGL 129
QA+ S L
Sbjct: 260 QQATSSSNL 268
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 51 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 110
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 111 KTLTGMHHPIQMKPADSEK 129
>gi|159032037|ref|NP_001103701.1| CUGBP Elav-like family member 2 isoform 4 [Mus musculus]
gi|3452501|emb|CAA09102.1| ETR-R3a protein [Rattus norvegicus]
gi|74144402|dbj|BAE36053.1| unnamed protein product [Mus musculus]
Length = 490
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|410963195|ref|XP_003988151.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Felis catus]
Length = 484
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|134152719|ref|NP_001077060.1| CUGBP Elav-like family member 2 isoform 4 [Homo sapiens]
gi|332833595|ref|XP_003312502.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Pan
troglodytes]
gi|397515226|ref|XP_003827857.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Pan paniscus]
gi|403278085|ref|XP_003930659.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Saimiri
boliviensis boliviensis]
gi|16660677|gb|AAL27627.1|AF432906_1 neuroblastoma apoptosis-related RNA-binding protein isoform 4 [Homo
sapiens]
gi|119606752|gb|EAW86346.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|221046096|dbj|BAH14725.1| unnamed protein product [Homo sapiens]
gi|410263774|gb|JAA19853.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 488
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|383415259|gb|AFH30843.1| CUGBP Elav-like family member 2 isoform 4 [Macaca mulatta]
Length = 488
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|440904320|gb|ELR54847.1| CUGBP Elav-like family member 2, partial [Bos grunniens mutus]
Length = 519
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 422 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 481
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 482 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 519
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 120 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 179
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 180 MEGCSSPIVVKFADTQKDKE 199
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 29 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 88
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 89 KTLPGMHHPIQMKPADSEK 107
>gi|296206140|ref|XP_002750082.1| PREDICTED: CUGBP Elav-like family member 2 [Callithrix jacchus]
Length = 531
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 434 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 493
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 494 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 531
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 157 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 216
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 217 MEGCSSPIVVKFADTQKDKE 236
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 66 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 125
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 126 KTLPGMHHPIQMKPADSEK 144
>gi|152013390|sp|Q7T2T1.2|CELF2_CHICK RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|31747201|gb|AAP57762.1| ELAV-type RNA-binding protein 3 variant L [Gallus gallus]
Length = 484
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|432089211|gb|ELK23234.1| CUGBP Elav-like family member 2 [Myotis davidii]
Length = 331
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 234 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 293
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 294 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 331
>gi|281345849|gb|EFB21433.1| hypothetical protein PANDA_019092 [Ailuropoda melanoleuca]
Length = 512
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 415 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 474
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 475 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 29 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 88
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 89 KTLPGMHHPIQMKPADSEK 107
>gi|35903017|ref|NP_919382.1| CUGBP Elav-like family member 2 [Danio rerio]
gi|19909954|dbj|BAB87828.1| elav-type ribonucleoprotein-3 [Danio rerio]
Length = 486
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 389 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 448
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 449 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ S SL G G P Y
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALL 231
Query: 121 YQASGSYGL 129
QA+ S L
Sbjct: 232 QQATSSSNL 240
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLTGMHHPIQMKPADSEK 101
>gi|410918516|ref|XP_003972731.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 521
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 75/97 (77%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY
Sbjct: 425 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSY 484
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 485 DNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 146 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ + SL G G P Y
Sbjct: 206 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALL 263
Query: 121 YQASGSYGL 129
QA+ S L
Sbjct: 264 QQAASSGNL 272
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 55 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 114
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 115 KTLTGMHHPIQMKPADSEK 133
>gi|410908155|ref|XP_003967556.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 468
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY+
Sbjct: 373 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYD 432
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 433 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 468
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K E E+ +FS +G I++ ++LRG S+GCAF+ + T+ A A++ ++
Sbjct: 142 MVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQT 201
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S PLVVK ADT+++++
Sbjct: 202 MEGCSSPLVVKLADTQRDKE 221
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE E+ LF +G + + ILR SKGC F+ + T++ AL A A++
Sbjct: 51 IPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNI 110
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 111 KTLSGMHHPIQMKPADSEK 129
>gi|387916084|gb|AFK11651.1| CUGBP Elav-like family member 2 isoform 2 [Callorhinchus milii]
Length = 513
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 416 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 475
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 476 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 144 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 203
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAPPYNGY 119
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ + + + GAL Y +
Sbjct: 204 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNSATWGNLTGLGALGPQYLAVSGQW 263
Query: 120 GYQASGSYG 128
G + SG G
Sbjct: 264 GTKTSGEMG 272
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ +E E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 53 IPRSWTEKELKELFEPYGAVHQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 112
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 113 KTLPGMHHPIQMKPADSEK 131
>gi|410908151|ref|XP_003967554.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 530
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY+
Sbjct: 435 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYD 494
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 530
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K E E+ +FS +G I++ ++LRG S+GCAF+ + T+ A A++ ++
Sbjct: 156 MVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S PLVVK ADT+++++
Sbjct: 216 MEGCSSPLVVKLADTQRDKE 235
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE E+ LF +G + + ILR SKGC F+ + T++ AL A A++
Sbjct: 65 IPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLSGMHHPIQMKPADSEK 143
>gi|410908157|ref|XP_003967557.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Takifugu
rubripes]
Length = 482
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY+
Sbjct: 387 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYD 446
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K E E+ +FS +G I++ ++LRG S+GCAF+ + T+ A A++ ++
Sbjct: 156 MVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S PLVVK ADT+++++
Sbjct: 216 MEGCSSPLVVKLADTQRDKE 235
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE E+ LF +G + + ILR SKGC F+ + T++ AL A A++
Sbjct: 65 IPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLSGMHHPIQMKPADSEK 143
>gi|62088448|dbj|BAD92671.1| BRUNO-like 6 RNA-binding protein variant [Homo sapiens]
Length = 305
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 156/339 (46%), Gaps = 49/339 (14%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF-LKYETKEQALAALEAINGKHK 60
LP E S L+ + + + ++TS C+ L ++ L A
Sbjct: 3 LPVRAEERTESCLWGCWASSR-------VRRTSDACSSPLATSRSARSCGVLTA-----P 50
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
++G+S LVVK ADT++ER RR Q+ HP+ LP+G Y
Sbjct: 51 VKGASSSLVVKLADTDRERALRRMQQMAGHLGAF------HPA---PLPLGACGAY---- 97
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ + Q L PG + Q + S + + PP
Sbjct: 98 ---TTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP---- 150
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGSVSPAVANSNPSTSSSGGTGSGGQ- 235
GSG +PGL P P G+ G PL N PGS + +P + S G Q
Sbjct: 151 GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQ 206
Query: 236 -------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 288
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFV
Sbjct: 207 AYAGMHHYAGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 266
Query: 289 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 267 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 305
>gi|410918520|ref|XP_003972733.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 501
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 75/97 (77%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY
Sbjct: 405 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSY 464
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 465 DNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 146 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 206 MEGCSSPIVVKFADTQKDKE 225
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 55 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 114
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 115 KTLTGMHHPIQMKPADSEK 133
>gi|348521218|ref|XP_003448123.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 483
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 75/97 (77%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY
Sbjct: 387 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSY 446
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 DNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ + SL G G P Y
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALL 231
Query: 121 YQASGSYGL 129
QA+ S L
Sbjct: 232 QQAASSGNL 240
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLTGMHHPIQMKPADSEK 101
>gi|410908153|ref|XP_003967555.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 510
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 75/96 (78%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY+
Sbjct: 415 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYD 474
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 475 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 510
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K E E+ +FS +G I++ ++LRG S+GCAF+ + T+ A A++ ++
Sbjct: 138 MVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S PLVVK ADT+++++
Sbjct: 198 MEGCSSPLVVKLADTQRDKE 217
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE E+ LF +G + + ILR SKGC F+ + T++ AL A A++
Sbjct: 47 IPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLSGMHHPIQMKPADSEK 125
>gi|4249668|gb|AAD13761.1| apoptosis-related RNA binding protein [Homo sapiens]
Length = 509
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 75/98 (76%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 133 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 192
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 193 MEGCSSPIVVKFADTQKDKE 212
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 42 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 101
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 102 KTLPGMHHPIQMKPADSEK 120
>gi|1568643|gb|AAB09040.1| RNA-binding protein BRUNOL3 [Homo sapiens]
Length = 490
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 75/98 (76%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|444724379|gb|ELW64984.1| CUGBP Elav-like family member 2 [Tupaia chinensis]
Length = 585
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 488 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 547
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 548 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 585
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 215 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 274
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 275 MEGCSSPIVVKFADTQKDKE 294
>gi|148695565|gb|EDL27512.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Mus
musculus]
Length = 478
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 331 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 389
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 324
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR N
Sbjct: 390 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDN 439
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 70 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 129
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 130 MEGCSSPMVVKFADTQKDKEQKR 152
>gi|149022604|gb|EDL79498.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 478
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 331 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 389
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 324
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR N
Sbjct: 390 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDN 439
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 70 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 129
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 130 MEGCSSPMVVKFADTQKDKEQKR 152
>gi|355677611|gb|AER96039.1| CUG triplet repeat, RNA binding protein 2 [Mustela putorius furo]
Length = 346
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 75/97 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 250 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 309
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 326
Y++P SAQ AI MNG Q+G K+LKVQLKR +KP
Sbjct: 310 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKP 346
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 37 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 80
CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 6 CAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 49
>gi|351699026|gb|EHB01945.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 483
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 83/114 (72%), Gaps = 2/114 (1%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 371 PTLYNQNLLTQQSIG-AAGSQKEGPQGANLFIYHLPQEFGDQDLLQMFVPFGNVVSAKVF 429
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK-QNKPY 327
+DK T +SKCF FVSY++P SAQ AI +NG Q+G K+LKVQLKR +K NKPY
Sbjct: 430 IDKQTNLSKCFSFVSYDNPLSAQAAIQSVNGFQIGMKQLKVQLKRSSKNDNKPY 483
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ + +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISEKCTENDIRVMFSSFGQIEEYRILRGPDGLSRGCAFVTFTTRGMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC + + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|354467972|ref|XP_003496441.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3
[Cricetulus griseus]
Length = 532
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEMANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|281203518|gb|EFA77718.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 341
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 160/335 (47%), Gaps = 31/335 (9%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+P + E E+S +F +G I ++ I++ + KGCAF+ + TKE+A A+ +N ++
Sbjct: 20 IPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLAINTVNSSNQ 79
Query: 61 MEGS-SVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQH-PSLFG--------ALPM 110
G + PL VK++D E E+ R+ L +AD S+FG +
Sbjct: 80 FLGDVTKPLQVKYSDNEIEKMERKLFIGM-----LGSADEDTVTSVFGKYGAIEELTIVR 134
Query: 111 GYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHG----IIPPVNQGNAMRGASPDLSSN 166
GYG+ + + + + + F G +I + +++
Sbjct: 135 EKEGRPKGYGFIKFSAREEAEDAIRELDGKHTFAGSSIPLIVKFADTERQKRKKQLMNTQ 194
Query: 167 MGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTS 225
P+N G G+ + P Q +PM Y + +NN+P P ++
Sbjct: 195 TQPQN----TWGGGGNNFYQQPNQQQFPMYYDNMNMHQHQVNNNP------FQRYQPRST 244
Query: 226 SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ ++LFIY++PQ +GD EL FQ +G V+SAKVF+DKAT SKCF
Sbjct: 245 NVYQMNQQYNEFQQESSDLFIYYLPQNYGDLELKMLFQTYGNVISAKVFIDKATNQSKCF 304
Query: 286 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
GFV+Y++P SA NAI +NG + GKKLKV K++
Sbjct: 305 GFVTYDNPQSALNAINDLNGFAIEGKKLKVNFKKE 339
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G +F+ HIP F ++EL F+ FG +L+ + DK T V K F+S+ + A AI
Sbjct: 12 GFKVFVGHIPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLAI 71
Query: 301 AMMN 304
+N
Sbjct: 72 NTVN 75
>gi|348513017|ref|XP_003444039.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 531
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 74/96 (77%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G Q EGP GANLFIYH+PQE GDQ+L F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 436 AGSQKEGPEGANLFIYHLPQECGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 495
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 496 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 531
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K E EV +FS +G I++ +ILRG S+GCAF+ + T+ A A++ ++
Sbjct: 158 MVSKKYGENEVRMMFSSFGQIEECRILRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S PLVVK+ADT+++++
Sbjct: 218 MEGCSSPLVVKFADTQRDKE 237
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF +G + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 67 IPRSWSETELKELFEPFGAVHQINILRDRTQNPPQSKGCCFVTFYTRKAALEAQNALHNI 126
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 127 KTLSGMHHPIQMKPADSEK 145
>gi|74142177|dbj|BAE31857.1| unnamed protein product [Mus musculus]
Length = 495
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EG GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 398 SAAGSQKEGTEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 457
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 458 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 495
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 121 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 180
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 181 MEGCSSPIVVKFADTQKDKE 200
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 30 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 89
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 90 KTLPGMHHPIQMKPADSEK 108
>gi|354467970|ref|XP_003496440.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Cricetulus griseus]
Length = 526
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEMANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|410931355|ref|XP_003979061.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 378
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 76/107 (71%)
Query: 221 NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 280
N S S G G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T
Sbjct: 272 NNLLSVSRGVIDGVLFAGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTN 331
Query: 281 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 332 LSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 378
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 58/83 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + ++ A +A+++++
Sbjct: 140 MISKKCNENDIRLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 200 MEGCSSPIVVKFADTQKDKEQKR 222
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE ++ LF YG + ++ +LR Q SKGC F+ Y T++ AL A A++
Sbjct: 50 IPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQNALHNM 109
Query: 59 HKMEGSSVPLVVKWADTEKERQARR 83
+ G P+ +K AD+EK R
Sbjct: 110 KILPGMHHPIQMKPADSEKNNVEDR 134
>gi|55731735|emb|CAH92572.1| hypothetical protein [Pongo abelii]
Length = 490
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 75/98 (76%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHPPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|354467968|ref|XP_003496439.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Cricetulus griseus]
Length = 520
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 423 SAAGSQKEGPEMANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 482
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 483 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 520
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 150 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 209
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 210 MEGCSSPIVVKFADTQKDKE 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 59 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 118
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 119 KTLPGMHHPIQMKPADSEK 137
>gi|74198996|dbj|BAE30715.1| unnamed protein product [Mus musculus]
Length = 488
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EG GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGTEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|3927998|emb|CAA77110.1| elav-type RNA-binding protein [Mus musculus]
Length = 484
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 73/93 (78%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P
Sbjct: 392 QKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPV 451
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 452 SAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ RR
Sbjct: 174 MEGCSSPIVVKFADTQKDKEKRR 196
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|344239315|gb|EGV95418.1| CUG-BP- and ETR-3-like factor 2 [Cricetulus griseus]
Length = 508
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEMANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|402592937|gb|EJW86864.1| ELAV-type RNA binding protein variant B [Wuchereria bancrofti]
Length = 509
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 85/118 (72%), Gaps = 6/118 (5%)
Query: 215 PAVANSNPSTSSSG-----GTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 269
P +A +N T+SS T SGGQ +GP G NLFIYH+PQ+F D +L F FG ++
Sbjct: 376 PQLATNNLLTASSTPNTGMNTTSGGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSII 435
Query: 270 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAKVF+DK T +SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K +KPY
Sbjct: 436 SAKVFIDKQTNLSKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDSKPY 492
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V +F+ +G I+D +L+ S+ S+GCAF+ + + A A++ ++
Sbjct: 115 MLNKKLTEDDVREMFAQFGHIEDCTVLKDSEGKSRGCAFVTFAHRSCAQQAIKQVHLSQT 174
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 99
MEG S P+VVK+ADT+KE+ A++ Q PN+ +
Sbjct: 175 MEGCSKPIVVKFADTQKEKDAKKICLLQLLQTAQPNSST 213
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P++ EAE LF +G++ L +LR QTS+GC F+ Y + A+AA A++
Sbjct: 29 IPRSWGEAECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAAQAALHNIRV 88
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ P+ +K AD E + +
Sbjct: 89 LPQMYHPVQMKPADIENRNERK 110
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTY 70
>gi|157108555|ref|XP_001650282.1| hypothetical protein AaeL_AAEL000695 [Aedes aegypti]
gi|108884042|gb|EAT48267.1| AAEL000695-PA [Aedes aegypti]
Length = 368
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 79/107 (73%)
Query: 221 NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 280
NP+ + + +G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T
Sbjct: 262 NPTMAQAVAAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQTN 321
Query: 281 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGFVS+++ ASAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 322 LSKCFGFVSFDNVASAQAAIQAMHGFQIGTKRLKVQLKRSKDASKPY 368
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 64/94 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LFS +G+I++ +LR + SKGCAF+ + TK+ A+ A+++++
Sbjct: 10 MLSKKYHENDVRHLFSGHGSIEECTVLRDTSGQSKGCAFVTFATKQAAIGAIKSLHQSKT 69
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+K++ A+R Q+ QS N+
Sbjct: 70 MEGCSAPLVVKFADTQKDKDAKRMQQMQSNLWNI 103
>gi|116007320|ref|NP_001036356.1| bruno-2, isoform E [Drosophila melanogaster]
gi|442627593|ref|NP_001260411.1| bruno-2, isoform L [Drosophila melanogaster]
gi|113194979|gb|ABI31310.1| bruno-2, isoform E [Drosophila melanogaster]
gi|440213741|gb|AGB92946.1| bruno-2, isoform L [Drosophila melanogaster]
Length = 893
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 211 GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 270
G+ S V S +++G TG QIEGP G+NLFIYH+PQEF D +L + F FG VLS
Sbjct: 779 GAASQPVTTSALQAAAAGVTGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLS 836
Query: 271 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 837 AKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 893
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 388 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 447
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 448 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 507
Query: 117 NG 118
G
Sbjct: 508 AG 509
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E + +F +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 302 IPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 361
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 362 LDGMHHPIQMKPADSENRNERK 383
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 236 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 286 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYT 345
Query: 293 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
+A A A+ N L G +Q+K + +N+
Sbjct: 346 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 379
>gi|386769529|ref|NP_001245999.1| bruno-2, isoform H [Drosophila melanogaster]
gi|386769535|ref|NP_001246002.1| bruno-2, isoform J [Drosophila melanogaster]
gi|226371828|gb|ACO51539.1| MIP06224p [Drosophila melanogaster]
gi|383291457|gb|AFH03673.1| bruno-2, isoform H [Drosophila melanogaster]
gi|383291460|gb|AFH03676.1| bruno-2, isoform J [Drosophila melanogaster]
Length = 651
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 211 GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 270
G+ S V S +++G TG QIEGP G+NLFIYH+PQEF D +L + F FG VLS
Sbjct: 537 GAASQPVTTSALQAAAAGVTGK--QIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLS 594
Query: 271 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 595 AKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 651
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 146 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 206 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 265
Query: 117 NG 118
G
Sbjct: 266 AG 267
>gi|269868303|gb|ACZ52456.1| Bruno-3 transcript variant 4 [Drosophila persimilis]
Length = 407
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------RQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIVNLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|426334349|ref|XP_004028716.1| PREDICTED: CUGBP Elav-like family member 1-like [Gorilla gorilla
gorilla]
Length = 104
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 73/94 (77%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
G EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P
Sbjct: 11 GYFEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNP 70
Query: 294 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 71 VSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 104
>gi|297275765|ref|XP_002801068.1| PREDICTED: CUGBP Elav-like family member 5-like [Macaca mulatta]
Length = 473
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 148/307 (48%), Gaps = 63/307 (20%)
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 121
+G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 189 QGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY-- 235
Query: 122 QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 181
+ LMQ + + + + P V +S N P P SG
Sbjct: 236 ----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHS 289
Query: 182 S---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NP 222
G AVPGL P+ P+PGG H L + G V SP VA + +P
Sbjct: 290 PPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLHP 346
Query: 223 STS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELGN 260
+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 347 AFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQ 406
Query: 261 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 407 MFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRP 466
Query: 321 NKQNKPY 327
PY
Sbjct: 467 KDPGHPY 473
>gi|194761394|ref|XP_001962914.1| GF19661 [Drosophila ananassae]
gi|190616611|gb|EDV32135.1| GF19661 [Drosophila ananassae]
Length = 229
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 135 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 194
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 195 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 229
>gi|327272098|ref|XP_003220823.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Anolis
carolinensis]
Length = 536
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P S
Sbjct: 445 LKGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVS 504
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 505 AQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|269868305|gb|ACZ52457.1| Bruno-3 transcript variant 4 [Drosophila persimilis]
Length = 407
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQA 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|427786275|gb|JAA58589.1| Putative cugbp elav-like family member 1 [Rhipicephalus pulchellus]
Length = 219
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G Q+EGP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 125 GKQVEGPEGANLFIYHLPQEFTDSDLAQTFMPFGNVISAKVFIDKQTNLSKCFGFVSYDN 184
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 185 SLSAQAAIQAMNGFQIGTKRLKVQLKRSKDASKPY 219
>gi|198463676|ref|XP_002135559.1| bruno-3 [Drosophila pseudoobscura pseudoobscura]
gi|198151365|gb|EDY74186.1| bruno-3 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 287 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 336
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 337 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 396
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 397 MNGFQIGMKRLKVQLKRPKDASRPY 421
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 61 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 120
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 121 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 154
>gi|194752425|ref|XP_001958523.1| GF10965 [Drosophila ananassae]
gi|190625805|gb|EDV41329.1| GF10965 [Drosophila ananassae]
Length = 422
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 288 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 337
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 338 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 397
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 398 MNGFQIGMKRLKVQLKRPKDASRPY 422
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 61 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 120
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 121 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 154
>gi|269868150|gb|ACZ52381.1| Bruno-3 transcript variant 11 [Drosophila pseudoobscura]
Length = 376
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 242 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 291
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 292 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 351
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 352 MNGFQIGMKRLKVQLKRPKDASRPY 376
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 37 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 96
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 97 RRMQQMAGHMNLL 109
>gi|269868142|gb|ACZ52377.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GRFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|24663908|ref|NP_729923.1| bruno-3, isoform A [Drosophila melanogaster]
gi|194870535|ref|XP_001972671.1| GG13757 [Drosophila erecta]
gi|195327422|ref|XP_002030418.1| GM24582 [Drosophila sechellia]
gi|195494162|ref|XP_002094720.1| GE20053 [Drosophila yakuba]
gi|16648344|gb|AAL25437.1| LD31834p [Drosophila melanogaster]
gi|23093534|gb|AAF49798.2| bruno-3, isoform A [Drosophila melanogaster]
gi|190654454|gb|EDV51697.1| GG13757 [Drosophila erecta]
gi|194119361|gb|EDW41404.1| GM24582 [Drosophila sechellia]
gi|194180821|gb|EDW94432.1| GE20053 [Drosophila yakuba]
gi|220945994|gb|ACL85540.1| bru-3-PA [synthetic construct]
gi|220955812|gb|ACL90449.1| bru-3-PA [synthetic construct]
Length = 422
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 288 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 337
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 338 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 397
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 398 MNGFQIGMKRLKVQLKRPKDASRPY 422
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 61 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 120
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 121 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 154
>gi|320545833|ref|NP_001189095.1| bruno-3, isoform H [Drosophila melanogaster]
gi|318069196|gb|ADV37531.1| bruno-3, isoform H [Drosophila melanogaster]
Length = 416
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 282 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 331
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 332 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 391
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 392 MNGFQIGMKRLKVQLKRPKDASRPY 416
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|344306569|ref|XP_003421958.1| PREDICTED: CUGBP Elav-like family member 5-like [Loxodonta
africana]
Length = 440
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 154/334 (46%), Gaps = 56/334 (16%)
Query: 37 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE------RQARRAQKAQSQ 90
CAFL Y ++ A+ A A++ + + G + P+ VK AD+E + AQ
Sbjct: 120 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGGPLGTGSSGAQWYTLT 179
Query: 91 ANNLPNA-DSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPP 149
PN ++QHP + +L G A + + + + L Q P +
Sbjct: 180 TTPPPNIRETQHPHPYPSLGAGCA--FVKFSSHTEAQAAI--HALHGSQTMPVSRATMLM 235
Query: 150 VNQGNAMRGASPDLSSNMG-----------------PRNYAMPPSGFVGS---GYPAVPG 189
Q + + LS + P P SG G AVPG
Sbjct: 236 QQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPG 295
Query: 190 LQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSGGTGSG 233
L P+ P+PGG H L + G V SP VA + +P+ S
Sbjct: 296 LVTPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLHPAFSGVQ----- 347
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
Q GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P
Sbjct: 348 -QYTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNVISSKVFMDRATNQSKCFGFVSFDNP 406
Query: 294 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
ASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 407 ASAQTAIQAMNGFQVGMKRLKVQLKRPKDPGHPY 440
>gi|269868315|gb|ACZ52462.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTLREDFLMFPGCSISGPEGC 277
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|443691317|gb|ELT93212.1| hypothetical protein CAPTEDRAFT_183838 [Capitella teleta]
Length = 462
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 73/96 (76%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+ Q EGP G NLFIYH+PQEFGD EL F FG V+SAKV++D+AT SKCFGFVS++
Sbjct: 367 TTAQKEGPEGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYIDRATNQSKCFGFVSFD 426
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 427 NPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE EV +FS YG+I++ ILR SKGCAF+K+ T A AA+ A++G
Sbjct: 111 MLNKQQSEEEVRQMFSPYGSIEECTILRDQNGNSKGCAFVKFTTHADAQAAINALHGSQT 170
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK+ADTEKERQ R+ Q+
Sbjct: 171 MPGASSSLVVKFADTEKERQLRKMQQ 196
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +L+ KGCAFL Y ++ AL A +A++ +
Sbjct: 24 IPRNLEEKDLRPIFEEFGQIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQQALHEQKT 83
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 84 LPGMNRPIQVKPADSESRAEDRK 106
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LF+ IP+ +++L F+ FG++ V D+ TG+ K F++Y +S AQ A+
Sbjct: 19 LFVGQIPRNLEEKDLRPIFEEFGQIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQQAL 78
>gi|320545827|ref|NP_001189092.1| bruno-3, isoform E [Drosophila melanogaster]
gi|318069193|gb|ADV37528.1| bruno-3, isoform E [Drosophila melanogaster]
Length = 408
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 274 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 323
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 324 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 383
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 384 MNGFQIGMKRLKVQLKRPKDASRPY 408
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|269868140|gb|ACZ52376.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|170061983|ref|XP_001866472.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880043|gb|EDS43426.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 359
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%)
Query: 220 SNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
+NP+ + + +G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T
Sbjct: 252 ANPTMAQAVAAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQT 311
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGFVS+++ ASAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 312 NLSKCFGFVSFDNGASAQAAIQAMHGFQIGTKRLKVQLKRSKDASKPY 359
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 64/94 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LFS +G+I++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 10 MLSKKYNENDVRQLFSGHGSIEECTVLRDPSGQSKGCAFVTFATKQAAIGAIKALHQSKT 69
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+K++ A+R Q+ QS N+
Sbjct: 70 MEGCSAPLVVKFADTQKDKDAKRMQQMQSNLWNI 103
>gi|83315537|ref|XP_730836.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23490683|gb|EAA22401.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana, putative
[Plasmodium yoelii yoelii]
Length = 440
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 155/325 (47%), Gaps = 80/325 (24%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPKN++E + +FS+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK
Sbjct: 121 LPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKT 180
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+EG + P+ V++A+ + +QA QSQ
Sbjct: 181 LEGCNRPVEVRFAEPKSSKQA------QSQVG---------------------------- 206
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG---NAMRGASPDLSSNMGPRNYAMPPS 177
+ P+QN P HGI P + G N G + +++N PR +
Sbjct: 207 -------------IQPLQNAP--HGISPQAHPGTPNNINYGNNFGVNNNY-PRQVGVWKE 250
Query: 178 GFVGSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGS 232
+ G G P Q+ MP L +NN+P N S SS
Sbjct: 251 YYSGEGRPYYYNEQTNTTQWEMPKEFETLF---MNNNPNI-------HNLSDSS------ 294
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
GPPGANLFI+H+P E+ +L AF FG +LSA++ +K TG ++ F FVSYE+
Sbjct: 295 -----GPPGANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYEN 349
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQL 317
SA AI+ MNG KKLKV +
Sbjct: 350 IESAAAAISQMNGFMALNKKLKVTV 374
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LFI +P+ + +++L F+ FG V + DK T + K FV S + A N
Sbjct: 12 PVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADN 71
Query: 299 AIAMMNG-----CQLGGKKLK 314
AI +N QLG ++K
Sbjct: 72 AIRSLNNQRTLDQQLGSLQVK 92
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
G A LFI +P+ ++ + + F +G V + D +TG+ K FV + A
Sbjct: 110 GVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQAL 169
Query: 298 NAIAMMNG 305
AI+ +NG
Sbjct: 170 YAISSLNG 177
>gi|269868311|gb|ACZ52460.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|442632161|ref|NP_001261807.1| bruno-3, isoform N [Drosophila melanogaster]
gi|442632163|ref|NP_001261808.1| bruno-3, isoform O [Drosophila melanogaster]
gi|440215743|gb|AGB94500.1| bruno-3, isoform N [Drosophila melanogaster]
gi|440215744|gb|AGB94501.1| bruno-3, isoform O [Drosophila melanogaster]
Length = 403
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 269 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 318
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 319 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 378
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 379 MNGFQIGMKRLKVQLKRPKDASRPY 403
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 42 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 101
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 102 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 135
>gi|269785109|ref|NP_001161510.1| bruno-like protein [Saccoglossus kowalevskii]
gi|268053989|gb|ACY92481.1| bruno-like protein [Saccoglossus kowalevskii]
Length = 485
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 75/104 (72%)
Query: 224 TSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 283
T S T Q EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SK
Sbjct: 382 TQQSNVTMPTQQREGPEGCNLFIYHLPQEFGDAELMQMFMPFGNVISSKVFVDRATNQSK 441
Query: 284 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
CFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR NKPY
Sbjct: 442 CFGFVSFDNPASAQGAIQAMNGFQIGMKRLKVQLKRPKDANKPY 485
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF YG I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 43 IPRNLEEKDLRPLFEEYGRIYELTVLKDRFTGMHKGCAFLTYCDRDSALRAQSALHEQKT 102
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 103 LPGMNRPIQVKPADSESRAEDRK 125
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 223 STSSSGGTGSGGQIEGPP---------GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 273
+ + GG + + PP LF+ IP+ +++L F+ +GR+ V
Sbjct: 8 AVQTCGGESAKNGVSNPPQTIPLKDHDAIKLFVGQIPRNLEEKDLRPLFEEYGRIYELTV 67
Query: 274 FVDKATGVSKCFGFVSY---ESPASAQNAI 300
D+ TG+ K F++Y +S AQ+A+
Sbjct: 68 LKDRFTGMHKGCAFLTYCDRDSALRAQSAL 97
>gi|320545843|ref|NP_001189100.1| bruno-3, isoform M [Drosophila melanogaster]
gi|318069201|gb|ADV37536.1| bruno-3, isoform M [Drosophila melanogaster]
Length = 370
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 236 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 285
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 286 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 345
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 346 MNGFQIGMKRLKVQLKRPKDASRPY 370
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|269868317|gb|ACZ52463.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+AD EKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADAEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|269868190|gb|ACZ52401.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 362
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIADLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|269868158|gb|ACZ52385.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 362
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAESESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|28574919|ref|NP_524059.4| bruno-3, isoform B [Drosophila melanogaster]
gi|23093533|gb|AAF49799.2| bruno-3, isoform B [Drosophila melanogaster]
Length = 363
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 229 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 278
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 279 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 338
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 339 MNGFQIGMKRLKVQLKRPKDASRPY 363
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|345310083|ref|XP_001515840.2| PREDICTED: CUGBP, Elav-like family member 2 [Ornithorhynchus
anatinus]
Length = 426
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
Query: 221 NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 280
NP +++S G+ GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T
Sbjct: 321 NPLSTTSSALGALTS-PGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTN 379
Query: 281 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 380 LSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 426
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|269868156|gb|ACZ52384.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
gi|269868192|gb|ACZ52402.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
gi|269868313|gb|ACZ52461.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|170592252|ref|XP_001900883.1| RNA recognition motif. [Brugia malayi]
gi|158591750|gb|EDP30354.1| RNA recognition motif [Brugia malayi]
Length = 487
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
Query: 218 ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 277
A+S P+T + T SGGQ +GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK
Sbjct: 364 ASSTPNTGMN--TTSGGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDK 421
Query: 278 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
T +SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K +KPY
Sbjct: 422 QTNLSKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDSKPY 470
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTY 70
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P++ E E LF +G++ L +LR QTS+GC F+ Y + A+AA A++
Sbjct: 29 IPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAAQAALHNIRV 88
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ P+ +K AD E + +
Sbjct: 89 LPQMYHPVQMKPADIENRNERK 110
>gi|321460482|gb|EFX71524.1| hypothetical protein DAPPUDRAFT_227924 [Daphnia pulex]
Length = 403
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 73/93 (78%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G+NLFIYH+PQEFGD +L AF FG +LSAKVF+DK T +SKCFGFVSY++P
Sbjct: 311 QQEGPEGSNLFIYHLPQEFGDTDLCQAFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNPM 370
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 371 SSQAAIQAMNGFQIGTKRLKVQLKRSKDASKPY 403
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 11/115 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +SE +V +FS YG+I++ +LR + S+GCAF+ + +++ A+ A++ ++
Sbjct: 107 MLSKKISENDVRIMFSAYGSIEECTVLRDNNNISRGCAFVTFTSRQSAVTAIKTVHHSQT 166
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPP 115
MEG S P+VVK+ADT+KE+ +R S N L+G + + PP
Sbjct: 167 MEGCSSPMVVKFADTQKEKDQKRVHHVGSTTN-----------LWGGIGINNLPP 210
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F YG + + +LR SKGC F+ + ++ AL A ++
Sbjct: 21 IPRSMDENDLRKMFEDYGQVHQVNVLRDKISGQSKGCCFVTFYKRKDALQAQNDMHNIKT 80
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 81 LSGMHHPIQMKPADSENRNERK 102
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS-YESPASAQ 297
P +F+ IP+ + +L F+ +G+V V DK +G SK FV+ Y+ + Q
Sbjct: 11 PDAIKMFVGQIPRSMDENDLRKMFEDYGQVHQVNVLRDKISGQSKGCCFVTFYKRKDALQ 70
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
M N L G +Q+K + +N+
Sbjct: 71 AQNDMHNIKTLSGMHHPIQMKPADSENR 98
>gi|195388102|ref|XP_002052729.1| GJ17715 [Drosophila virilis]
gi|194149186|gb|EDW64884.1| GJ17715 [Drosophila virilis]
Length = 831
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 737 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 796
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 797 PESAQMAIKAMNGFQVGTKRLKVQLKKPKDASKPY 831
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 464 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 523
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 524 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 558
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ EA++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 378 VPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 437
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 438 LNGMYHPIQMKPADSENRNERK 459
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 368 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 427
Query: 299 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N L G +Q+K + +N+
Sbjct: 428 AQDALHNVKTLNGMYHPIQMKPADSENR 455
>gi|269868200|gb|ACZ52406.1| Bruno-3 transcript variant 20 [Drosophila pseudoobscura]
Length = 356
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 222 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 271
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 272 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 331
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 332 MNGFQIGMKRLKVQLKRPKDASRPY 356
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 32 QTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQA 91
++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 27 ESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHM 86
Query: 92 NNL 94
N L
Sbjct: 87 NLL 89
>gi|285002208|ref|NP_001165444.1| CUG triplet repeat, RNA binding protein 2-b [Xenopus laevis]
gi|1568645|gb|AAB09041.1| Etr-3 [Xenopus laevis]
Length = 538
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 72/91 (79%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
+GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 448 QGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSA 507
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 508 QAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 538
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|341896837|gb|EGT52772.1| CBN-ETR-1 protein [Caenorhabditis brenneri]
Length = 585
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 222 PSTSSSGGTG--SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
P+TSSS G+ G + GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T
Sbjct: 478 PATSSSVGSQMVGNGDVRGPDGANLFIYHLPQDFGDTDLINTFAPFGAILSAKVFIDKVT 537
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
+SKC+GFVS+E+P SA NAI+ MNG Q+G K+LKVQLK D
Sbjct: 538 NLSKCYGFVSFENPQSATNAISAMNGFQIGSKRLKVQLKVD 578
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E + +FS YG I+D +LR S+GCAF+ + + A+ A + ++ M
Sbjct: 142 LSKKHNEENLREIFSKYGQIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 201
Query: 62 EGSSVPLVVKWADTEKERQAR 82
EG S PLVVK+ADT+K++ +
Sbjct: 202 EGCSAPLVVKFADTQKDKDVK 222
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N +E + LF YG + ILR S Q SKGC F+ + ++ A+ A A++
Sbjct: 55 IPRNWNEVDCRRLFEQYGPVFSCNILRDKSTQASKGCCFVTFFHRKDAIEAQGALHNIKV 114
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+EG P+ +K ADTE + +
Sbjct: 115 IEGMHHPVQMKPADTENRNERK 136
>gi|158293699|ref|XP_315047.4| AGAP004950-PA [Anopheles gambiae str. PEST]
gi|157016572|gb|EAA10371.5| AGAP004950-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 176 PSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQ 235
P+G + A PG+Q PYPG + P ++ +A P+ G
Sbjct: 207 PNGDAALPHAAYPGIQ---PYPG-VAYPAVYGQFPQAIPQPIAAVAPAQREDMLMFPGCS 262
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PAS
Sbjct: 263 ISGPEGCNLFIYHLPQEFGDGELMQMFMPFGTVISSKVFIDRATNQSKCFGFVSFDNPAS 322
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 323 AQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 354
>gi|195171586|ref|XP_002026586.1| GL21647 [Drosophila persimilis]
gi|194111502|gb|EDW33545.1| GL21647 [Drosophila persimilis]
Length = 458
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 324 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 373
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 374 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 433
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 434 MNGFQIGMKRLKVQLKRPKDASRPY 458
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 61 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 120
Query: 61 M 61
M
Sbjct: 121 M 121
>gi|427786277|gb|JAA58590.1| Putative cugbp elav-like family member 1 [Rhipicephalus pulchellus]
Length = 211
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G Q+EGP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 117 GKQVEGPEGANLFIYHLPQEFTDSDLAQTFMPFGNVISAKVFIDKQTNLSKCFGFVSYDN 176
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 177 SLSAQAAIQAMNGFQIGTKRLKVQLKRSKDASKPY 211
>gi|156368353|ref|XP_001627659.1| predicted protein [Nematostella vectensis]
gi|156214575|gb|EDO35559.1| predicted protein [Nematostella vectensis]
Length = 383
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G+NLFIYH+PQEF D +L FQ FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 291 QKEGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVM 350
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQNAI MNG Q+G K+LKVQLKR N+PY
Sbjct: 351 SAQNAIQHMNGFQIGAKRLKVQLKRPKDANRPY 383
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K+ E ++ +FS +GTI++L +LR + TSKGCAF+K+ + QA A+ ++
Sbjct: 91 MISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSKGCAFIKFANRMQAQNAIATMHNSTT 150
Query: 61 ME 62
ME
Sbjct: 151 ME 152
>gi|195035643|ref|XP_001989285.1| GH11642 [Drosophila grimshawi]
gi|193905285|gb|EDW04152.1| GH11642 [Drosophila grimshawi]
Length = 833
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 739 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 798
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 799 PESAQMAIKAMNGFQVGTKRLKVQLKKPKDASKPY 833
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 464 MLNKKLNENDVRKLFEVHGGIEECTVLRDPNGQSKGCAFVTFATKHAAISAIKVTLSQNK 523
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 524 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 558
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ EA++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 378 VPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 437
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 438 LNGMYHPIQMKPADSENRNERK 459
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 225 SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 284
S S G + P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 354 SDSAVVTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKG 413
Query: 285 FGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 414 CCFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 455
>gi|195117924|ref|XP_002003495.1| GI17944 [Drosophila mojavensis]
gi|193914070|gb|EDW12937.1| GI17944 [Drosophila mojavensis]
Length = 851
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 757 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 816
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 817 PESAQMAIKSMNGFQVGTKRLKVQLKKPKDASKPY 851
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 484 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 543
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 544 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 578
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ EA++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 398 VPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 457
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 458 LSGMYHPIQMKPADSENRNERK 479
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 388 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 447
Query: 299 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N L G +Q+K + +N+
Sbjct: 448 AQDALHNVKTLSGMYHPIQMKPADSENR 475
>gi|195590112|ref|XP_002084791.1| GD12651 [Drosophila simulans]
gi|194196800|gb|EDX10376.1| GD12651 [Drosophila simulans]
Length = 616
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 482 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 531
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 532 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 591
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 592 MNGFQIGMKRLKVQLKRPKDASRPY 616
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 255 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 314
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 315 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 348
>gi|195148186|ref|XP_002015055.1| GL18624 [Drosophila persimilis]
gi|194107008|gb|EDW29051.1| GL18624 [Drosophila persimilis]
Length = 764
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 670 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 729
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 730 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 764
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 60/86 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A+++++
Sbjct: 416 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKSLHQSQT 475
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
MEG S PLVVK+ADT+KE+ ++ Q+
Sbjct: 476 MEGCSAPLVVKFADTQKEKDQKKMQQ 501
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E + +F +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 330 IPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 389
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 390 LDGMHHPIQMKPADSENRNERK 411
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 230 TGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
T S ++ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+
Sbjct: 308 TNSNEMLKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCC 367
Query: 287 FVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV+Y + +A A A+ N L G +Q+K + +N+
Sbjct: 368 FVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 407
>gi|198474574|ref|XP_002132714.1| GA25731 [Drosophila pseudoobscura pseudoobscura]
gi|198138448|gb|EDY70116.1| GA25731 [Drosophila pseudoobscura pseudoobscura]
Length = 574
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 480 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 539
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 540 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 574
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 60/86 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A+++++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKSLHQSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
MEG S PLVVK+ADT+KE+ ++ Q+
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQ 86
>gi|195435047|ref|XP_002065513.1| GK15493 [Drosophila willistoni]
gi|194161598|gb|EDW76499.1| GK15493 [Drosophila willistoni]
Length = 866
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 772 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 831
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 832 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 866
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 472 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 531
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 532 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 566
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E ++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 386 VPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 445
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 446 LNGMYHPIQMKPADSENRNERK 467
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 363 TDATVTYGEKEPDPDNIKMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGC 422
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 423 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 463
>gi|308456493|ref|XP_003090683.1| CRE-ETR-1 protein [Caenorhabditis remanei]
gi|308261154|gb|EFP05107.1| CRE-ETR-1 protein [Caenorhabditis remanei]
Length = 612
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 81/114 (71%)
Query: 207 NNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFG 266
N S + V ++ STS +G G + GP GANLFIYH+PQ+FGD +L N F FG
Sbjct: 492 NLQATSAAVGVPSAVTSTSGAGQLIGNGDVRGPDGANLFIYHLPQDFGDTDLINTFAPFG 551
Query: 267 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
+LSAKVF+DK T +SKC+GFVS+E+P SA NAI+ MNG Q+G K+LKVQLK D
Sbjct: 552 VILSAKVFIDKVTNLSKCYGFVSFENPQSATNAISAMNGFQIGSKRLKVQLKVD 605
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K SE + +FS +G I+D +LR + S+GCAF+ + + A+ A + ++ M
Sbjct: 112 LSKKHSEENLREIFSKFGQIEDCSVLRDNDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 171
Query: 62 EGSSVPLVVKWADTEKERQAR 82
EG S PLVVK+ADT+K++ +
Sbjct: 172 EGCSAPLVVKFADTQKDKDVK 192
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E + LF YG++ ILR S QTSKGC F+ + ++ A+ A A++
Sbjct: 25 IPRQWNEVDCRRLFEAYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGALHNIKV 84
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K ADTE + +
Sbjct: 85 IDGMHHPVQMKPADTENRNERK 106
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 246 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AMMN 304
I+ IP+++ + + F+A+G V S + DK+T SK FV++ A A A+ N
Sbjct: 22 IFQIPRQWNEVDCRRLFEAYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGALHN 81
Query: 305 GCQLGGKKLKVQLKRDNKQNK 325
+ G VQ+K + +N+
Sbjct: 82 IKVIDGMHHPVQMKPADTENR 102
>gi|390176612|ref|XP_002132720.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858697|gb|EDY70122.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 818
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 724 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 783
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 784 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 818
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 370 IPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTRRAALKAQDALHNVKT 429
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 430 LAGMYHPIQMKPADSENRNERK 451
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ IP+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 360 PDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTRRAALK 419
Query: 299 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N L G +Q+K + +N+
Sbjct: 420 AQDALHNVKTLAGMYHPIQMKPADSENR 447
>gi|395539013|ref|XP_003771468.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Sarcophilus
harrisii]
Length = 540
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 451 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 510
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 511 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 540
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|195148190|ref|XP_002015057.1| GL18622 [Drosophila persimilis]
gi|194107010|gb|EDW29053.1| GL18622 [Drosophila persimilis]
Length = 398
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 304 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 363
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 364 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 398
>gi|195020121|ref|XP_001985125.1| GH14684 [Drosophila grimshawi]
gi|195378885|ref|XP_002048212.1| GJ13842 [Drosophila virilis]
gi|193898607|gb|EDV97473.1| GH14684 [Drosophila grimshawi]
gi|194155370|gb|EDW70554.1| GJ13842 [Drosophila virilis]
Length = 421
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 87/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 287 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 336
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 337 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 396
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 397 MNGFQIGMKRLKVQLKRPKDASRPY 421
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 61 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 120
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 121 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 154
>gi|195472359|ref|XP_002088468.1| GE18585 [Drosophila yakuba]
gi|194174569|gb|EDW88180.1| GE18585 [Drosophila yakuba]
Length = 508
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 414 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 473
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 474 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 508
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
M+G S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MDGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 117 NG 118
G
Sbjct: 121 AG 122
>gi|194761400|ref|XP_001962917.1| GF14192 [Drosophila ananassae]
gi|190616614|gb|EDV32138.1| GF14192 [Drosophila ananassae]
Length = 852
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 758 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 817
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 818 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 852
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 478 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 537
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 538 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 572
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 392 VPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 451
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 452 LNGMYHPIQMKPADSENRNERK 473
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 382 PDNIKMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 441
Query: 299 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N L G +Q+K + +N+
Sbjct: 442 AQDALHNVKTLNGMYHPIQMKPADSENR 469
>gi|322798836|gb|EFZ20383.1| hypothetical protein SINV_80350 [Solenopsis invicta]
Length = 385
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 74/98 (75%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
T + QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 288 TSTDKQIEGPEGCNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVS 347
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++ +SAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 348 YDNASSAQAAIQTMHGFQIGMKRLKVQLKRSKDASKPY 385
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 94
>gi|357623706|gb|EHJ74750.1| hypothetical protein KGM_06214 [Danaus plexippus]
Length = 283
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 89/149 (59%), Gaps = 24/149 (16%)
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
F G YPAV G Q+P P P M +++PA G I G
Sbjct: 159 FPGVAYPAVYG-QFPQPIPPPM----------STIAPA-------------QREGCSISG 194
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ
Sbjct: 195 PEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQA 254
Query: 299 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 255 AIQAMNGFQIGMKRLKVQLKRPKDANRPY 283
>gi|269868186|gb|ACZ52399.1| Bruno-3 transcript variant 14 [Drosophila pseudoobscura]
Length = 373
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 87/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P + P +A P+ G I GP G
Sbjct: 239 GLPPFPGVAFPAVY----------GQFPQVLPPPLAAVAPTQREDFLMFPGCSISGPEGC 288
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 289 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIRA 348
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 349 MNGFQIGMKRLKVQLKRPKDASRPY 373
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 48 GCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 106
>gi|405963038|gb|EKC28647.1| CUG-BP- and ETR-3-like factor 2 [Crassostrea gigas]
Length = 647
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 73/96 (76%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G Q EGP GANLFIYH+PQEF DQ+L F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 552 AGKQTEGPDGANLFIYHLPQEFSDQDLMQTFIPFGTVISAKVFIDKQTNLSKCFGFVSYD 611
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+ SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 612 NALSAQAAIQAMNGFQIGMKRLKVQLKRPKSDSKPY 647
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K SE++V +F+ +G+I+D ILR S+GCAF+ Y ++ AL A++ ++
Sbjct: 160 MISKKCSESDVKMMFAPFGSIEDCTILRDQNGQSRGCAFVTYANRQSALNAIKNMHHSQT 219
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S P+VVK+ADT+KE++A++ Q+ N+
Sbjct: 220 MEGCSSPVVVKFADTQKEKEAKKLQQINQNLWNI 253
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G + L +LR SKGC F+ + T++ AL A A++
Sbjct: 73 IPRSMDENDLRKMFEEFGAVYQLNVLRDKATGQSKGCCFVTFYTRKAALDAQNALHNIKT 132
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
M G P+ +K AD+EK + R+
Sbjct: 133 MSGMHHPIQMKPADSEKRNEERK 155
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 216 AVANSNPSTSSSGGTGS---GGQIE----GPPGANLFIYHIPQEFGDQELGNAFQAFGRV 268
V S S+ S G G+ GQ++ P +F+ IP+ + +L F+ FG V
Sbjct: 33 CVKKSRLSSYSDGEIGTRSMNGQVQKSEPDPDAIKMFVGQIPRSMDENDLRKMFEEFGAV 92
Query: 269 LSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLK 318
V DKATG SK FV++ + +A +A A+ N + G +Q+K
Sbjct: 93 YQLNVLRDKATGQSKGCCFVTFYTRKAALDAQNALHNIKTMSGMHHPIQMK 143
>gi|390176614|ref|XP_003736147.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858698|gb|EIM52220.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 595
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 501 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 560
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 561 PDSAQVAIKAMNGFQVGTKRLKVQLKKPKDASKPY 595
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 147 IPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTRRAALKAQDALHNVKT 206
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 207 LAGMYHPIQMKPADSENRNERK 228
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ IP+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 137 PDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTRRAALK 196
Query: 299 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N L G +Q+K + +N+
Sbjct: 197 AQDALHNVKTLAGMYHPIQMKPADSENR 224
>gi|156347048|ref|XP_001621619.1| hypothetical protein NEMVEDRAFT_v1g144256 [Nematostella vectensis]
gi|156207744|gb|EDO29519.1| predicted protein [Nematostella vectensis]
Length = 159
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G+NLFIYH+PQEF D +L FQ FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 67 QKEGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVM 126
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQNAI MNG Q+G K+LKVQLKR N+PY
Sbjct: 127 SAQNAIQHMNGFQIGAKRLKVQLKRPKDANRPY 159
>gi|328780076|ref|XP_003249751.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis mellifera]
Length = 628
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ A
Sbjct: 536 QIEGPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNVA 595
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 596 SAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 628
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 64/94 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +FS+YGTI++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 202 MLSKKFTENDVRNMFSVYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 261
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 262 MEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 295
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+P ++ E ++ LF +G + + ILR S +GC F+ + T++ AL A A++
Sbjct: 116 VPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDAQNALHNVKT 175
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
G P+ +K AD+E + +
Sbjct: 176 FNGMRHPIQMKPADSENRNERK 197
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 106 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 165
Query: 299 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N G + +Q+K + +N+
Sbjct: 166 AQNALHNVKTFNGMRHPIQMKPADSENR 193
>gi|432944122|ref|XP_004083333.1| PREDICTED: CUGBP Elav-like family member 2-like [Oryzias latipes]
Length = 578
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 489 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 548
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 549 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 578
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 62 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 121
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 122 KTLTGMHHPIQMKPADSEK 140
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 53/172 (30%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC----------------------- 37
M+ K +E ++ +FS +G I++ +ILRG S+G
Sbjct: 153 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGRLQAALQVFARIHLAEVRPVGTLF 212
Query: 38 -AFLK----------------------YETKEQALAALEAINGKHKMEGSSVPLVVKWAD 74
FL+ ++T+ ++L A E + EG S P+VVK+AD
Sbjct: 213 PVFLRLSADSVCPHRPRLLLIQAFSPDFDTQMESLFADEIVG-----EGCSSPIVVKFAD 267
Query: 75 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGS 126
T+K+++ RR Q+ +Q N+ + SL G G P Y QA+ S
Sbjct: 268 TQKDKEQRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALLQQATSS 317
>gi|410908161|ref|XP_003967559.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 6 [Takifugu
rubripes]
Length = 538
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 449 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 508
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 509 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 538
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K E E+ +FS +G I++ ++LRG S+GCAF+ + T+ A A++ ++
Sbjct: 156 MVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S PLVVK ADT+++++
Sbjct: 216 MEGCSSPLVVKLADTQRDKE 235
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE E+ LF +G + + ILR SKGC F+ + T++ AL A A++
Sbjct: 65 IPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLSGMHHPIQMKPADSEK 143
>gi|410908159|ref|XP_003967558.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 5 [Takifugu
rubripes]
Length = 490
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 401 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 460
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K E E+ +FS +G I++ ++LRG S+GCAF+ + T+ A A++ ++
Sbjct: 156 MVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S PLVVK ADT+++++
Sbjct: 216 MEGCSSPLVVKLADTQRDKE 235
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE E+ LF +G + + ILR SKGC F+ + T++ AL A A++
Sbjct: 65 IPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLSGMHHPIQMKPADSEK 143
>gi|380013066|ref|XP_003690591.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis florea]
Length = 582
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ A
Sbjct: 490 QIEGPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNVA 549
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 550 SAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 582
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 64/94 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +FS+YGTI++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 179 MLSKKFTENDVRNMFSVYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 238
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 239 MEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 272
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+P ++ E ++ LF +G + + ILR S +GC F+ + T++ AL A A++
Sbjct: 93 VPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDAQNALHNVKT 152
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
G P+ +K AD+E + +
Sbjct: 153 FNGMRHPIQMKPADSENRNERK 174
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 83 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 142
Query: 299 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N G + +Q+K + +N+
Sbjct: 143 AQNALHNVKTFNGMRHPIQMKPADSENR 170
>gi|269868194|gb|ACZ52403.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 362
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT +KCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQNKCFGFVSFDNPASAQAAIQA 337
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 338 MNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|307170912|gb|EFN63015.1| CUG-BP- and ETR-3-like factor 1 [Camponotus floridanus]
Length = 395
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 75/104 (72%)
Query: 224 TSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 283
T + T + QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SK
Sbjct: 292 TQKTKFTNTDKQIEGPEGCNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSK 351
Query: 284 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
CFGFVSY++ SAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 352 CFGFVSYDNATSAQMAIQTMHGFQIGMKRLKVQLKRSKDASKPY 395
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
>gi|260787638|ref|XP_002588859.1| hypothetical protein BRAFLDRAFT_60030 [Branchiostoma floridae]
gi|229274030|gb|EEN44870.1| hypothetical protein BRAFLDRAFT_60030 [Branchiostoma floridae]
Length = 164
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PA
Sbjct: 72 QKEGPEGCNLFIYHLPQEFGDAELMQMFMPFGNVISAKVFVDRATNQSKCFGFVSFDNPA 131
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 132 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 164
>gi|241723820|ref|XP_002404307.1| conserved hypothetical protein [Ixodes scapularis]
gi|215505391|gb|EEC14885.1| conserved hypothetical protein [Ixodes scapularis]
Length = 284
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVS+++PA
Sbjct: 192 QREGPEGCNLFIYHLPQEFGDAELMQMFMPFGNVISAKVFIDRATNQSKCFGFVSFDNPA 251
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 252 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 284
>gi|19912828|dbj|BAB88676.1| Cs-ETR1 [Ciona savignyi]
Length = 116
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 213 VSPAV-ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 271
V+P + A+ P+ + T + Q EGP G NLFIYH+PQEF D +L N FQ FG V+SA
Sbjct: 1 VAPGLPASQLPANAMLTSTTNAPQKEGPEGCNLFIYHLPQEFSDADLANVFQPFGNVISA 60
Query: 272 KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
KVF+D+AT SKCFGFVS+++ S+Q AI MNG Q+G K+LKVQLKR +Q++PY
Sbjct: 61 KVFIDRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY 116
>gi|440586603|emb|CCK33023.1| RRM domain protein Bruno, partial [Platynereis dumerilii]
Length = 154
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 72/96 (75%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G Q EGP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 59 AGKQTEGPDGANLFIYHLPQEFADHDLMQMFMPFGTVVSAKVFIDKQTNLSKCFGFVSYD 118
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+P SAQ AI MNG Q+G K+LKVQLKR KPY
Sbjct: 119 NPVSAQAAIQAMNGFQIGMKRLKVQLKRPKSDAKPY 154
>gi|198431449|ref|XP_002130974.1| PREDICTED: similar to HrETR-1 [Ciona intestinalis]
Length = 538
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 73/93 (78%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEF D +L N FQ FG V+SAKVF+D+AT SKCFGFVS+++
Sbjct: 446 QKEGPDGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFIDRATNQSKCFGFVSFDNAI 505
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+Q AI MNG Q+G K+LKVQLKR +Q++PY
Sbjct: 506 SSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY 538
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 58/86 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF +GTI++ ILR + SKGCAF+K ++A +A+EA++G
Sbjct: 169 MLGKRQNEDDVRILFEPFGTIEECTILRTPEGQSKGCAFVKLSCHQEAKSAMEALHGSQT 228
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK+ADT+KER RR Q+
Sbjct: 229 MPGASSSLVVKFADTDKERAVRRMQQ 254
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN E E+ +F+ +G I +L +LR KGCAFL Y K A+ A +++ +
Sbjct: 82 VPKNWEEKELRQVFAPFGEIFELSVLRDKYTGMHKGCAFLTYTQKTSAMNAQNSLHERKT 141
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK ADT + + R+
Sbjct: 142 LPGMNHPIQVKPADTVSKGEDRK 164
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
LFI +P+ + ++EL F FG + V DK TG+ K F++Y SA NA
Sbjct: 74 AVKLFIGQVPKNWEEKELRQVFAPFGEIFELSVLRDKYTGMHKGCAFLTYTQKTSAMNA 132
>gi|195435051|ref|XP_002065515.1| GK15495 [Drosophila willistoni]
gi|194161600|gb|EDW76501.1| GK15495 [Drosophila willistoni]
Length = 758
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 664 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 723
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 724 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 758
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 377 MLNKKYTEADVRQLFTGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQT 436
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
MEG S PLVVK+ADT+KE+ ++ Q+
Sbjct: 437 MEGCSAPLVVKFADTQKEKDQKKMQQ 462
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E ++ +F +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 291 IPKTWDETKLRRMFEQFGHVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 350
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 351 LDGMHHPIQMKPADSENRNERK 372
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 224 TSSSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 280
TS+ S + P A+ +F+ IP+ + + +L F+ FG V + V DK T
Sbjct: 263 TSALDSANSNDLTKDQPDADNIKMFVGQIPKTWDETKLRRMFEQFGHVHTLNVLRDKVTS 322
Query: 281 VSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
+S+ FV+Y + +A A A+ N L G +Q+K + +N+
Sbjct: 323 ISRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 368
>gi|395501660|ref|XP_003755209.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 399
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 309 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASA 368
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 369 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 399
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG TSKGCAF+K+ + +A AA+ +++G
Sbjct: 116 MLGKQQSEEDVRRLFEPFGQIEECTILRGPDGTSKGCAFVKFGSHAEAQAAINSLHGSQT 175
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 176 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 205
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 29 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSALHEQKT 88
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 89 LPGMNRPIQVKPADSEGRGEDRK 111
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y +S AQ+A
Sbjct: 23 KLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSA 82
Query: 300 I 300
+
Sbjct: 83 L 83
>gi|157103910|ref|XP_001648180.1| deadenylation factor EDEN-BP, putative [Aedes aegypti]
gi|108880459|gb|EAT44684.1| AAEL003979-PA, partial [Aedes aegypti]
Length = 285
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 81/124 (65%), Gaps = 6/124 (4%)
Query: 210 PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 263
PG PAV A P + + G I GP G NLFIYH+PQEFGD EL F
Sbjct: 162 PGVAYPAVYGQFPQAIPQPIATIAPAQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFM 221
Query: 264 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 222 PFGTVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDA 281
Query: 324 NKPY 327
N+PY
Sbjct: 282 NRPY 285
>gi|410950073|ref|XP_004001486.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Felis catus]
Length = 479
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 153/327 (46%), Gaps = 63/327 (19%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 74 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 133
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 134 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 181
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 182 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 234
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PG GH L + G V SP VA + +
Sbjct: 235 SPPLLGSTAVPGLVAPITNGFAGVVPFPG---GHPALETVYANGLVPYPAQSPTVAETLH 291
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQE GD EL
Sbjct: 292 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEXGDTELT 351
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFG 286
F FG ++S+KVF+D+AT SKCF
Sbjct: 352 QMFLPFGNIISSKVFMDRATNQSKCFA 378
>gi|126272943|ref|XP_001371226.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Monodelphis
domestica]
Length = 491
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 401 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASA 460
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG TSKGCAF+K+ ++ +A AA+ +++G
Sbjct: 147 MLGKQQSEEDVRRLFEPFGQIEECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQN 206
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 207 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 236
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 60 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSALHEQKT 119
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 120 LPGMNRPIQVKPADSEGRGEDRK 142
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 302
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y + SA A A+
Sbjct: 55 LFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSAL 114
Query: 303 MNGCQLGGKKLKVQLKRDNKQNK 325
L G +Q+K + + +
Sbjct: 115 HEQKTLPGMNRPIQVKPADSEGR 137
>gi|124513886|ref|XP_001350299.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23615716|emb|CAD52708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 509
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 152/324 (46%), Gaps = 74/324 (22%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPKN++E + +FS YGT++++ I++ S KGC+F+K+ KEQAL A++++NGK
Sbjct: 191 LPKNITEDNIKEMFSPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQALYAIKSLNGKKT 250
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+EG + P+ V++A+ + +Q + +P+
Sbjct: 251 LEGCTRPVEVRFAEPKSSKQPQ-------------------------IPLT--------- 276
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
L PMQN P P ++ N + + +N PR +
Sbjct: 277 -------------LQPMQNPPHAMAPQPSISSPNNINFGNNFSVNNNYPRQVGPWKEYYS 323
Query: 181 GSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQ 235
G G P Q+ MP L +NNS AN + + SSG
Sbjct: 324 GEGRPYYYNEQTNTTQWEMPKEFETLF---MNNS--------ANMHNLSESSG------- 365
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
PPGANLFI+H+P E+ +L AF FG +LSA++ +K TG ++ F FVSY+S S
Sbjct: 366 ---PPGANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYDSLES 422
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKR 319
A AI+ MNG KKLKV +K+
Sbjct: 423 AAAAISQMNGFMALNKKLKVTVKK 446
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI +P+ + +L F+ +G V + DK T V K FV S + A NAI ++
Sbjct: 87 LFIGRVPKNIEEDQLRPIFEEYGIVNEVVIIRDKITNVHKSSAFVKMASISEADNAIRLL 146
Query: 304 NG-----CQLGGKKLK 314
N QLG ++K
Sbjct: 147 NNQKTLDAQLGSLQVK 162
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN+ E ++ +F YG + ++ I+R K AF+K + +A A+ +N +
Sbjct: 92 VPKNIEEDQLRPIFEEYGIVNEVVIIRDKITNVHKSSAFVKMASISEADNAIRLLNNQKT 151
Query: 61 MEGSSVPLVVKWADTE 76
++ L VK+A E
Sbjct: 152 LDAQLGSLQVKYASGE 167
>gi|55730095|emb|CAH91772.1| hypothetical protein [Pongo abelii]
Length = 519
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 72/90 (80%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
Y++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKR 500
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTSSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|330864857|gb|AEC46884.1| FI14817p [Drosophila melanogaster]
Length = 302
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 168 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 217
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 218 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 277
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+L+VQLKR ++PY
Sbjct: 278 MNGFQIGMKRLEVQLKRPKDASRPY 302
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 1 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 34
>gi|157138640|ref|XP_001664292.1| hypothetical protein AaeL_AAEL014033 [Aedes aegypti]
gi|108869466|gb|EAT33691.1| AAEL014033-PA, partial [Aedes aegypti]
Length = 351
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 81/124 (65%), Gaps = 6/124 (4%)
Query: 210 PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 263
PG PAV A P + + G I GP G NLFIYH+PQEFGD EL F
Sbjct: 228 PGVAYPAVYGQFPQAIPQPIATIAPAQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFM 287
Query: 264 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 288 PFGTVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDA 347
Query: 324 NKPY 327
N+PY
Sbjct: 348 NRPY 351
>gi|334314038|ref|XP_003339981.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Monodelphis
domestica]
Length = 470
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 380 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASA 439
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 440 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 470
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG TSKGCAF+K+ ++ +A AA+ +++G
Sbjct: 147 MLGKQQSEEDVRRLFEPFGQIEECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQN 206
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 207 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 236
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 60 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSALHEQKT 119
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 120 LPGMNRPIQVKPADSEGRGEDRK 142
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y +S AQ+A+
Sbjct: 55 LFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSAL 114
>gi|338717391|ref|XP_003363632.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Equus caballus]
Length = 540
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 448 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 507
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 508 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 540
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 157 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 216
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 217 LPGMNRPIQVKPAASEGRGEDRK 239
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 301
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y + SA A A
Sbjct: 151 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 210
Query: 302 MMNGCQLGGKKLKVQLK 318
+ L G +Q+K
Sbjct: 211 LHEQKTLPGMNRPIQVK 227
>gi|332021723|gb|EGI62079.1| CUG-BP- and ETR-3-like factor 2 [Acromyrmex echinatior]
Length = 405
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 73/98 (74%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
T + QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 308 TSTDKQIEGPEGCNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVS 367
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++ +SAQ AI M+G Q+G K+LKVQLKR KPY
Sbjct: 368 YDNASSAQAAIQTMHGFQIGMKRLKVQLKRSKDACKPY 405
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
>gi|259089631|gb|ACV91671.1| AT31783p [Drosophila melanogaster]
Length = 810
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 717 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 776
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 777 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 810
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 450 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 509
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 510 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 544
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 364 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 423
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 424 LNGMYHPIQMKPADSENRNERK 445
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 341 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 400
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 401 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 441
>gi|195035649|ref|XP_001989288.1| GH11645 [Drosophila grimshawi]
gi|193905288|gb|EDW04155.1| GH11645 [Drosophila grimshawi]
Length = 791
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 697 GKQIEGPDGSNLFIYHLPQEFTDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 756
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 757 PHSANAAIQAMHGFQIGTKRLKVQLKRPRDSGKPY 791
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 62/89 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A+++++
Sbjct: 406 MLNKKYTEADVRQLFAGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKSLHQSQT 465
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQS 89
MEG S PLVVK+ADT+KE+ ++ Q+ Q+
Sbjct: 466 MEGCSAPLVVKFADTQKEKDQKKMQQLQA 494
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E ++ LF +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 320 IPKTWDEIKLRCLFEQFGRVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 379
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 380 LDGMHHPIQMKPADSENRNERK 401
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 302
+F+ IP+ + + +L F+ FGRV + V DK T +S+ FV+Y + +A A A+
Sbjct: 315 MFVGQIPKTWDEIKLRCLFEQFGRVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 374
Query: 303 MNGCQLGGKKLKVQLKRDNKQNK 325
N L G +Q+K + +N+
Sbjct: 375 HNIKTLDGMHHPIQMKPADSENR 397
>gi|24583873|ref|NP_723737.1| arrest, isoform B [Drosophila melanogaster]
gi|442627569|ref|NP_001260403.1| arrest, isoform G [Drosophila melanogaster]
gi|22946318|gb|AAN10810.1| arrest, isoform B [Drosophila melanogaster]
gi|375065944|gb|AFA28453.1| FI19388p1 [Drosophila melanogaster]
gi|440213733|gb|AGB92938.1| arrest, isoform G [Drosophila melanogaster]
Length = 810
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 717 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 776
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 777 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 810
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 450 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 509
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 510 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 544
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 364 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKT 423
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 424 LNGMYHPIQMKPADSENRNERK 445
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 341 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 400
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 401 CFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENR 441
>gi|354473520|ref|XP_003498983.1| PREDICTED: CUGBP Elav-like family member 6-like [Cricetulus
griseus]
Length = 551
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 459 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 518
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 519 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 551
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 123 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 182
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 183 LPGMNRPIQVKPAASEGRGEDRK 205
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 117 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 176
Query: 300 I 300
+
Sbjct: 177 L 177
>gi|2231301|gb|AAB61993.1| testis-specific RNP-type RNA binding protein [Drosophila
melanogaster]
Length = 808
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 715 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 774
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 775 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 808
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 448 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 507
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 508 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 542
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 362 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 421
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 422 LNGMYHPIQMKPADSENRNERK 443
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 339 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 398
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 399 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 439
>gi|195351033|ref|XP_002042041.1| GM26763 [Drosophila sechellia]
gi|194123865|gb|EDW45908.1| GM26763 [Drosophila sechellia]
Length = 816
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 723 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 782
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 783 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 816
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 444 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 503
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 504 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 538
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 358 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 417
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 418 LNGMYHPIQMKPADSENRNERK 439
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 335 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 394
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 395 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 435
>gi|194861289|ref|XP_001969750.1| GG23776 [Drosophila erecta]
gi|190661617|gb|EDV58809.1| GG23776 [Drosophila erecta]
Length = 837
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 744 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 803
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 804 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 837
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 465 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 524
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 525 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 559
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 379 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 438
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 439 LNGMYHPIQMKPADSENRNERK 460
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 356 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 415
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 416 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 456
>gi|356483111|gb|AET11743.1| FI15316p1 [Drosophila melanogaster]
Length = 317
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 224 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 283
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 284 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 317
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 2 MEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 35
>gi|24583879|ref|NP_723740.1| arrest, isoform D [Drosophila melanogaster]
gi|17946480|gb|AAL49272.1| RE72594p [Drosophila melanogaster]
gi|22946321|gb|AAN10813.1| arrest, isoform D [Drosophila melanogaster]
gi|220948776|gb|ACL86931.1| aret-PD [synthetic construct]
Length = 361
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 268 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 327
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 328 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 361
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 1 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 60
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 61 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 95
>gi|195472345|ref|XP_002088461.1| GE18580 [Drosophila yakuba]
gi|194174562|gb|EDW88173.1| GE18580 [Drosophila yakuba]
Length = 830
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 737 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 796
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 797 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 830
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 458 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 517
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 518 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 552
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 372 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 431
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 432 LNGMYHPIQMKPADSENRNERK 453
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 349 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 408
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 409 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 449
>gi|432852722|ref|XP_004067352.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Oryzias latipes]
Length = 493
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 73/93 (78%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
+I+GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+
Sbjct: 401 KIKGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPS 460
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 493
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ +LRG SKGCAF+K+ + +A AA+ +++G
Sbjct: 136 MLGKQQSEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQT 195
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 196 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 225
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 49 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKT 108
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 109 LPGMNRPIQVKPADSEGRGEDRK 131
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|195388108|ref|XP_002052732.1| GJ17718 [Drosophila virilis]
gi|194149189|gb|EDW64887.1| GJ17718 [Drosophila virilis]
Length = 738
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 644 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 703
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 704 PHSANAAIQAMHGFQIGTKRLKVQLKRPKDSGKPY 738
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 62/89 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 370 MLNKKFTEADVRQLFTGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQT 429
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQS 89
MEG S PLVVK+ADT+KE+ ++ Q+ Q+
Sbjct: 430 MEGCSAPLVVKFADTQKEKDQKKMQQLQA 458
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E ++ LF +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 284 IPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 343
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 344 LDGMHHPIQMKPADSENRNERK 365
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 302
+F+ IP+ + + +L F+ FGRV + V DK T +S+ FV+Y + +A A A+
Sbjct: 279 MFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 338
Query: 303 MNGCQLGGKKLKVQLKRDNKQNK 325
N L G +Q+K + +N+
Sbjct: 339 HNIKTLDGMHHPIQMKPADSENR 361
>gi|426233875|ref|XP_004010933.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Ovis aries]
Length = 451
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 359 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 418
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 419 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 451
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 25 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 84
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 85 LPGMNRPIQVKPAASEGRGEDRK 107
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 19 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 78
Query: 300 I 300
+
Sbjct: 79 L 79
>gi|335292430|ref|XP_003356729.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 2 [Sus scrofa]
Length = 344
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 252 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 311
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 312 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
>gi|312068271|ref|XP_003137136.1| hypothetical protein LOAG_01549 [Loa loa]
gi|307767708|gb|EFO26942.1| hypothetical protein LOAG_01549 [Loa loa]
Length = 528
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 223 STSSSGGTGSG-GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
S S++G + +G GQ +GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK T +
Sbjct: 407 SVSNTGVSTAGSGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQTNL 466
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K NKPY
Sbjct: 467 SKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDNKPY 511
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E V +F+ +G I+D +L+ S+ S+GCAF+ + + A A+ ++
Sbjct: 115 MLNKKLTEDSVREMFAQFGHIEDCTVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQT 174
Query: 61 MEGSSVPLVVKWADTEKERQARRA 84
MEG S P+VVK+ADT+KE+ A+++
Sbjct: 175 MEGCSKPIVVKFADTQKEKDAKKS 198
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTY 70
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P++ EAE LF +G++ L +LR Q S+GC F+ Y + A+AA A++
Sbjct: 29 IPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTYYKRADAIAAQAALHNIRV 88
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ P+ +K AD E + +
Sbjct: 89 LPQMYHPVQMKPADIENRNERK 110
>gi|432852728|ref|XP_004067355.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 5
[Oryzias latipes]
Length = 443
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 73/93 (78%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
+I+GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+
Sbjct: 351 KIKGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPS 410
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 411 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 443
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ +LRG SKGCAF+K+ + +A AA+ +++G
Sbjct: 136 MLGKQQSEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQT 195
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 196 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 225
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 49 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKT 108
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 109 LPGMNRPIQVKPADSEGRGEDRK 131
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 223 STSSSGGTGSGGQI-------EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 275
ST++S G +G I + LFI IP+ +++L F+ FG++ V
Sbjct: 16 STTNSAGRMNGLTIGQNTIPMKDHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLK 75
Query: 276 DKATGVSKCFGFVSY---ESPASAQNAI 300
D+ TG+ K F++Y ES AQ+A+
Sbjct: 76 DRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|195578717|ref|XP_002079210.1| GD23828 [Drosophila simulans]
gi|194191219|gb|EDX04795.1| GD23828 [Drosophila simulans]
Length = 821
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 728 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 787
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 788 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 821
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 449 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 508
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 509 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 543
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 363 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 422
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 423 LNGMYHPIQMKPADSENRNERK 444
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 340 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 399
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 400 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 440
>gi|410960908|ref|XP_003987029.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Felis catus]
Length = 344
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 252 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 311
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 312 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
>gi|431893701|gb|ELK03522.1| CUG-BP- and ETR-3-like factor 6 [Pteropus alecto]
Length = 505
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 413 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 472
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 473 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 505
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+++++G
Sbjct: 112 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRT 171
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 172 MAGASSSLVVKLADTDRERALRRMQQMAGQ 201
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 25 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 84
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 85 LPGMNRPIQVKPAASEGRGEDRK 107
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 19 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 78
Query: 300 I 300
+
Sbjct: 79 L 79
>gi|269868178|gb|ACZ52395.1| Bruno-3 transcript variant 5 [Drosophila pseudoobscura]
Length = 401
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 316
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 317 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 376
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 377 MNGFQIGMKRLKVQLKRPKDASRPY 401
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|193204848|ref|NP_001122629.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
gi|351063344|emb|CCD71499.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
Length = 535
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 75/98 (76%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 431 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 490
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D
Sbjct: 491 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD 528
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E + LF YG++ ILR S Q SKGC F+ + ++ A+ A A++
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+EG P+ +K ADTE + +
Sbjct: 122 IEGMHHPVQMKPADTENRNERK 143
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E + +F+ +G I+D +LR S+GCAF+ + + A+ A + ++ M
Sbjct: 149 LSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 208
Query: 62 E 62
E
Sbjct: 209 E 209
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 219 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 278
++ PST++ +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 279 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|159163851|pdb|2CPZ|A Chain A, Solution Structure Of Rna Binding Domain 3 In Cug Triplet
Repeat Rna-Binding Protein 1
gi|255311729|pdb|2RQ4|A Chain A, Refinement Of Rna Binding Domain 3 In Cug Triplet Repeat
Rna-Binding Protein 1
gi|255311730|pdb|2RQC|A Chain A, Solution Structure Of Rna-Binding Domain 3 Of Cugbp1 In
Complex With Rna (Ug)3
Length = 115
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 223 STSSSGGT-----GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 277
S+ SSG T +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK
Sbjct: 2 SSGSSGLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDK 61
Query: 278 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +K
Sbjct: 62 QTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSK 109
>gi|410049377|ref|XP_003952740.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Pan
troglodytes]
Length = 369
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 277 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 336
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 337 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 369
>gi|321448797|gb|EFX61589.1| hypothetical protein DAPPUDRAFT_338859 [Daphnia pulex]
Length = 293
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
Query: 200 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
++ +PL + V + +NP + G I GP G NLFIYH+PQEFGD EL
Sbjct: 167 VISTKPLPTAENPVLSQIPLANPKPCQTT-ERKGCSISGPEGCNLFIYHLPQEFGDAELM 225
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 226 QMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 285
Query: 320 DNKQNKPY 327
N+PY
Sbjct: 286 PKDANRPY 293
>gi|432119145|gb|ELK38360.1| CUGBP Elav-like family member 6 [Myotis davidii]
Length = 416
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 324 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 383
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 384 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 416
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+++++G
Sbjct: 67 MLGKQQGEDDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRT 126
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 127 MAGASSSLVVKLADTDRERALRRMQQMVGQ 156
>gi|119598306|gb|EAW77900.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|193784955|dbj|BAG54108.1| unnamed protein product [Homo sapiens]
Length = 342
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 250 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 309
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 310 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 342
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+ ++G
Sbjct: 1 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 61 MAGASSSLVVKLADTDRERALRRMQQ 86
>gi|34526541|dbj|BAC85148.1| FLJ00324 protein [Homo sapiens]
Length = 376
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 284 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 343
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 344 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 376
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+ ++G
Sbjct: 35 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRT 94
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 95 MAGASSSLVVKLADTDRERALRRMQQ 120
>gi|393911007|gb|EJD76121.1| hypothetical protein, variant [Loa loa]
Length = 480
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 223 STSSSGGTGSG-GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
S S++G + +G GQ +GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK T +
Sbjct: 359 SVSNTGVSTAGSGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQTNL 418
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K NKPY
Sbjct: 419 SKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDNKPY 463
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E V +F+ +G I+D +L+ S+ S+GCAF+ + + A A+ ++
Sbjct: 115 MLNKKLTEDSVREMFAQFGHIEDCTVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQT 174
Query: 61 MEGSSVPLVVKWADTEKERQARRA 84
MEG S P+VVK+ADT+KE+ A+++
Sbjct: 175 MEGCSKPIVVKFADTQKEKDAKKS 198
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTY 70
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P++ EAE LF +G++ L +LR Q S+GC F+ Y + A+AA A++
Sbjct: 29 IPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTYYKRADAIAAQAALHNIRV 88
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ P+ +K AD E + +
Sbjct: 89 LPQMYHPVQMKPADIENRNERK 110
>gi|344284431|ref|XP_003413971.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Loxodonta africana]
Length = 499
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 407 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 466
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 467 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 499
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEG 63
+ G
Sbjct: 113 LPG 115
>gi|442627571|ref|NP_001260404.1| arrest, isoform H [Drosophila melanogaster]
gi|442627573|ref|NP_001260405.1| arrest, isoform I [Drosophila melanogaster]
gi|442627575|ref|NP_001260406.1| arrest, isoform J [Drosophila melanogaster]
gi|442627577|ref|NP_001260407.1| arrest, isoform K [Drosophila melanogaster]
gi|440213734|gb|AGB92939.1| arrest, isoform H [Drosophila melanogaster]
gi|440213735|gb|AGB92940.1| arrest, isoform I [Drosophila melanogaster]
gi|440213736|gb|AGB92941.1| arrest, isoform J [Drosophila melanogaster]
gi|440213737|gb|AGB92942.1| arrest, isoform K [Drosophila melanogaster]
Length = 573
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 480 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 539
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 540 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 573
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 213 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 272
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 273 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 307
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 127 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKT 186
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 187 LNGMYHPIQMKPADSENRNERK 208
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 104 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 163
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 164 CFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENR 204
>gi|301768673|ref|XP_002919757.1| PREDICTED: CUGBP Elav-like family member 6-like, partial
[Ailuropoda melanoleuca]
Length = 473
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 381 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 440
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 441 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 473
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+++++G
Sbjct: 132 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRT 191
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 192 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACGAYT 239
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 45 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 104
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 105 LPGMNRPIQVKPAASEGRGEDRK 127
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 39 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 98
Query: 300 I 300
+
Sbjct: 99 L 99
>gi|281340436|gb|EFB16020.1| hypothetical protein PANDA_008409 [Ailuropoda melanoleuca]
Length = 470
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 378 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 437
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 438 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 470
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+++++G
Sbjct: 129 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRT 188
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 189 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACGAYT 236
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 42 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 101
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 102 LPGMNRPIQVKPAASEGRGEDRK 124
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 36 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 95
Query: 300 I 300
+
Sbjct: 96 L 96
>gi|329663834|ref|NP_001192573.1| CUGBP Elav-like family member 6 [Bos taurus]
gi|296483717|tpg|DAA25832.1| TPA: trinucleotide repeat containing 4 (predicted)-like [Bos
taurus]
Length = 480
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 388 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 447
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 448 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 480
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+++++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGQ 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|334325385|ref|XP_001367310.2| PREDICTED: CUGBP Elav-like family member 4-like [Monodelphis
domestica]
Length = 460
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 370 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 429
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 430 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 114 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 174 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 203
>gi|302565316|ref|NP_001180884.1| CUGBP Elav-like family member 6 [Macaca mulatta]
Length = 481
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGQ 229
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|410960910|ref|XP_003987030.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Felis catus]
Length = 443
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 351 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 410
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 411 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 443
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+++++G
Sbjct: 102 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRT 161
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 162 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACGAYT 209
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK A +E
Sbjct: 74 LPGMNRPIQVKPAASE 89
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 8 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 67
Query: 300 I 300
+
Sbjct: 68 L 68
>gi|311260847|ref|XP_003128555.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 1 [Sus scrofa]
Length = 480
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 388 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 447
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 448 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 480
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+++++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGQ 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|296213628|ref|XP_002753353.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Callithrix
jacchus]
Length = 481
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACSAYT 247
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FG + V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|269868144|gb|ACZ52378.1| Bruno-3 transcript variant 5 [Drosophila pseudoobscura]
Length = 401
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 316
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 317 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 376
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 377 MNGFQIGMKRLKVQLKRPKDASRPY 401
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|34194499|gb|AAH33838.1| BRUNOL6 protein [Homo sapiens]
Length = 368
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 276 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 335
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 336 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 368
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+ ++G
Sbjct: 27 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRT 86
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 87 MAGASSSLVVKLADTDRERALRRMQQ 112
>gi|157818811|ref|NP_001100297.1| CUGBP Elav-like family member 6 [Rattus norvegicus]
gi|149041860|gb|EDL95701.1| bruno-like 6, RNA binding protein (Drosophila) (predicted) [Rattus
norvegicus]
Length = 459
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 367 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 426
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 427 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 459
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|289547743|ref|NP_001166156.1| CUGBP Elav-like family member 6 isoform 3 [Homo sapiens]
gi|194377382|dbj|BAG57639.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 252 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 311
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 312 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
>gi|397495530|ref|XP_003818605.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Pan paniscus]
Length = 481
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|269868188|gb|ACZ52400.1| Bruno-3 transcript variant 15 [Drosophila pseudoobscura]
Length = 370
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 242 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 285
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 286 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 345
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 346 MNGFQIGMKRLKVQLKRPKDASRPY 370
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 37 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 96
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 97 RRMQQMAGHMNLL 109
>gi|432852720|ref|XP_004067351.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Oryzias latipes]
Length = 481
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 391 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 450
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 451 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ +LRG SKGCAF+K+ + +A AA+ +++G
Sbjct: 136 MLGKQQSEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQT 195
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 196 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 225
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 49 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKT 108
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 109 LPGMNRPIQVKPADSEGRGEDRK 131
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|426379621|ref|XP_004056490.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Gorilla
gorilla gorilla]
Length = 344
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 252 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 311
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 312 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
>gi|2148976|gb|AAB58464.1| bruno [Drosophila melanogaster]
Length = 604
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 511 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 570
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 571 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 604
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 244 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 303
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 304 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 338
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 158 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 217
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 218 LNGMYHPIQMKPADSENRNERK 239
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 135 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 194
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 195 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENR 235
>gi|351705755|gb|EHB08674.1| CUG-BP- and ETR-3-like factor 6, partial [Heterocephalus glaber]
Length = 393
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 301 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 360
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 361 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 393
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 53 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSQT 112
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q L HP+ LP+G Y
Sbjct: 113 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAL------HPA---PLPLGACGAYT 160
>gi|194861272|ref|XP_001969746.1| GG23781 [Drosophila erecta]
gi|190661613|gb|EDV58805.1| GG23781 [Drosophila erecta]
Length = 163
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 73/96 (76%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY+
Sbjct: 68 TGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYD 127
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 128 NPHSANAAIQAMHGFQIGAKRLKVQLKRSKDAAKPY 163
>gi|401409201|ref|XP_003884049.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
gi|325118466|emb|CBZ54017.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
Length = 678
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 144/334 (43%), Gaps = 62/334 (18%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +SE E+ F YGT++++ +++ S T KGCAF+K++ KE+ L A+ +NGKH
Sbjct: 240 IPRTMSEDELRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHI 299
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
EG + P+ V++A E +++R Q+ Q N +
Sbjct: 300 FEGCTRPVEVRFA----ESKSQRQQQMAGQHNLGGLGGWGGGGVM--------------- 340
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
Q G G+ R AS SN PR F
Sbjct: 341 ------------------TQAGLSGM---------SRSASTLAGSNANPRQAGQWKEYFA 373
Query: 181 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG--------- 231
G P Y Y RP ++ N ++ SGG G
Sbjct: 374 PDGRP-----YYHNEYTNVTTWERPPEFDHLPLASLALGGNQASMFSGGVGLHHGSVNSG 428
Query: 232 -SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G + GPPGAN+F++HIP E+ +L F FG ++S + VDK + ++ F FVSY
Sbjct: 429 IGGSETAGPPGANVFVFHIPNEWTKADLIQTFSGFGNIVSCHIAVDKVSHRNRGFAFVSY 488
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 324
++ SA NA+ MNGC K+L V +K+ + +
Sbjct: 489 DNVQSAANAVNHMNGCLAANKRLNVSIKKGEEHH 522
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+P+ V E + +F +G ++++ ++R K AF+K + A A + A++
Sbjct: 137 VPQTVDEDALRPIFEGFGDVREVFVIRDKNTLKHKNSAFVKMASLAAADACIRALHSNRI 196
Query: 61 MEGSSVPLVVKWADTEKER 79
++ + P++VK+A E ER
Sbjct: 197 LDAALGPIIVKYATGEAER 215
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
A LF+ IP+ + EL FQ +G V V D ATG K FV ++ +A+
Sbjct: 233 AKLFVGSIPRTMSEDELRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMR 292
Query: 302 MMNGCQL 308
+NG +
Sbjct: 293 NLNGKHI 299
>gi|426379617|ref|XP_004056488.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Gorilla
gorilla gorilla]
Length = 481
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQ 225
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|348500286|ref|XP_003437704.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Oreochromis
niloticus]
Length = 481
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 391 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 450
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 451 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ +LRG SKGCAF+K+ + +A AA+ +++G
Sbjct: 136 MLGKQQSEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQT 195
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 196 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 225
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 49 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKT 108
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 109 LPGMNRPIQVKPADSEGRGEDRK 131
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|193204852|ref|NP_001122631.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
gi|351063347|emb|CCD71502.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
Length = 588
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 75/98 (76%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 484 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 543
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D
Sbjct: 544 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD 581
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E + +F+ +G I+D +LR S+GCAF+ + + A+ A + ++ M
Sbjct: 149 LSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 208
Query: 62 EGSSVPLVVKWADTEKERQAR 82
EG S PLVVK+ADT+K++ +
Sbjct: 209 EGCSAPLVVKFADTQKDKDVK 229
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E + LF YG++ ILR S Q SKGC F+ + ++ A+ A A++
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+EG P+ +K ADTE + +
Sbjct: 122 IEGMHHPVQMKPADTENRNERK 143
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 219 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 278
++ PST++ +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 279 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|193204850|ref|NP_001122630.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
gi|351063346|emb|CCD71501.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
Length = 586
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 75/98 (76%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 482 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 541
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D
Sbjct: 542 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD 579
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E + +F+ +G I+D +LR S+GCAF+ + + A+ A + ++ M
Sbjct: 149 LSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 208
Query: 62 EGSSVPLVVKWADTEKERQAR 82
EG S PLVVK+ADT+K++ +
Sbjct: 209 EGCSAPLVVKFADTQKDKDVK 229
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E + LF YG++ ILR S Q SKGC F+ + ++ A+ A A++
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+EG P+ +K ADTE + +
Sbjct: 122 IEGMHHPVQMKPADTENRNERK 143
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 219 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 278
++ PST++ +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 279 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|24583877|ref|NP_723739.1| arrest, isoform A [Drosophila melanogaster]
gi|281364913|ref|NP_001162963.1| arrest, isoform E [Drosophila melanogaster]
gi|15291827|gb|AAK93182.1| LD29068p [Drosophila melanogaster]
gi|22946320|gb|AAN10812.1| arrest, isoform A [Drosophila melanogaster]
gi|220945910|gb|ACL85498.1| aret-PA [synthetic construct]
gi|220955600|gb|ACL90343.1| aret-PA [synthetic construct]
gi|272407017|gb|ACZ94249.1| arrest, isoform E [Drosophila melanogaster]
Length = 604
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 511 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 570
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 571 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 604
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 244 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 303
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 304 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 338
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 158 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKT 217
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 218 LNGMYHPIQMKPADSENRNERK 239
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 135 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 194
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 195 CFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENR 235
>gi|70780381|ref|NP_443072.3| CUGBP Elav-like family member 6 isoform 1 [Homo sapiens]
gi|74760888|sp|Q96J87.1|CELF6_HUMAN RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|15341327|gb|AAK95615.1|AF401233_1 BRUNO-like 6 RNA-binding protein [Homo sapiens]
gi|17046404|gb|AAL34513.1|AF425606_1 RNA-binding protein CELF6 [Homo sapiens]
gi|119598307|gb|EAW77901.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 481
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQ 225
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|402874763|ref|XP_003901197.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Papio anubis]
gi|387542958|gb|AFJ72106.1| CUGBP Elav-like family member 6 isoform 1 [Macaca mulatta]
Length = 481
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGQ 229
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|269868196|gb|ACZ52404.1| Bruno-3 transcript variant 19 [Drosophila pseudoobscura]
gi|269868198|gb|ACZ52405.1| Bruno-3 transcript variant 19 [Drosophila pseudoobscura]
Length = 356
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 271
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 272 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 331
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 332 MNGFQIGMKRLKVQLKRPKDASRPY 356
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|332236062|ref|XP_003267224.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Nomascus
leucogenys]
Length = 481
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|297697028|ref|XP_002825676.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Pongo abelii]
Length = 466
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 374 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 433
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 466
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|145306688|gb|ABP57108.1| CUG-BP and ETR-3-like factor 6 [Gallus gallus]
Length = 445
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 355 EGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 414
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 415 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 445
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G
Sbjct: 101 MLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 161 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 190
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E+++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSEGRGEDRK 96
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ + +L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 8 KLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSA 67
Query: 300 I 300
+
Sbjct: 68 L 68
>gi|21430058|gb|AAM50707.1| GM15173p [Drosophila melanogaster]
Length = 181
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 88 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 147
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 148 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 181
>gi|395822449|ref|XP_003784530.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Otolemur
garnettii]
Length = 481
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQMAGQ 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|355692855|gb|EHH27458.1| CUGBP Elav-like family member 6, partial [Macaca mulatta]
Length = 389
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 297 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 356
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 357 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 389
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 129 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 188
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 189 MAGASSSLVVKLADTDRERALRRMQQ 214
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 42 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 101
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 102 LPGMNRPIQVKPAASEGRGEDRK 124
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 36 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 95
Query: 300 I 300
+
Sbjct: 96 L 96
>gi|363737471|ref|XP_425051.3| PREDICTED: CUGBP Elav-like family member 3 [Gallus gallus]
Length = 445
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 355 EGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 414
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 415 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 445
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G
Sbjct: 101 MLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 161 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 190
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E+++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSEGRGEDRK 96
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ + +L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 8 KLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSA 67
Query: 300 I 300
+
Sbjct: 68 L 68
>gi|359323408|ref|XP_854054.3| PREDICTED: CUGBP, Elav-like family member 6 [Canis lupus
familiaris]
Length = 413
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 321 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 380
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 381 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 413
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+++++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRT 199
Query: 61 M 61
M
Sbjct: 200 M 200
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|432852726|ref|XP_004067354.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 4
[Oryzias latipes]
Length = 494
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 404 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 463
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 464 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 494
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ +LRG SKGCAF+K+ + +A AA+ +++G
Sbjct: 136 MLGKQQSEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQT 195
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 196 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 225
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 49 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKT 108
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 109 LPGMNRPIQVKPADSEGRGEDRK 131
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|193204845|ref|NP_001022295.2| Protein ETR-1, isoform b [Caenorhabditis elegans]
gi|351063345|emb|CCD71500.1| Protein ETR-1, isoform b [Caenorhabditis elegans]
Length = 352
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 248 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 307
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 308 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD--RGNPY 350
>gi|344269048|ref|XP_003406367.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 1
[Loxodonta africana]
Length = 447
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 357 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 416
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 417 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 101 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 161 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 190
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 9 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 68
>gi|380800413|gb|AFE72082.1| CUGBP Elav-like family member 6 isoform 1, partial [Macaca mulatta]
Length = 245
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 153 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 212
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 213 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 245
>gi|442627567|ref|NP_723738.2| arrest, isoform F [Drosophila melanogaster]
gi|440213732|gb|AAN10811.2| arrest, isoform F [Drosophila melanogaster]
Length = 620
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 527 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 586
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SAQ AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 587 PDSAQVAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 620
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 244 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 303
Query: 61 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 304 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 338
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E+++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 158 VPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKT 217
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 218 LNGMYHPIQMKPADSENRNERK 239
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 227 SGGTGSGGQIE-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+ T + G+ E P +F+ +P+ + +L F+ +G V S V DKATG+SK
Sbjct: 135 TDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 194
Query: 286 GFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
FV++ + +A A A+ N L G +Q+K + +N+
Sbjct: 195 CFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENR 235
>gi|410912254|ref|XP_003969605.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Takifugu
rubripes]
Length = 481
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 391 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 450
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 451 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ +LRG SKGCAF+K+ + +A AA+ +++G
Sbjct: 136 MLGKQQSEDDVRRLFESFGQIEECTVLRGPDGASKGCAFVKFSSHGEAQAAINSLHGGQT 195
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 196 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 225
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 49 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKT 108
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 109 LPGMNRPIQVKPADSEGRGEDRK 131
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|17532857|ref|NP_493673.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
gi|1289522|gb|AAA98566.1| elav-type ribonucleoprotein [Caenorhabditis elegans]
gi|151936111|gb|ABS18832.1| ELAV-type RNA binding protein variant A [Caenorhabditis elegans]
gi|351063336|emb|CCD71491.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
Length = 584
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 480 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 539
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 540 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD--RGNPY 582
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E + +F+ +G I+D +LR S+GCAF+ + + A+ A + ++ M
Sbjct: 149 LSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 208
Query: 62 EGSSVPLVVKWADTEKERQAR 82
EG S PLVVK+ADT+K++ +
Sbjct: 209 EGCSAPLVVKFADTQKDKDVK 229
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E + LF YG++ ILR S Q SKGC F+ + ++ A+ A A++
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+EG P+ +K ADTE + +
Sbjct: 122 IEGMHHPVQMKPADTENRNERK 143
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 219 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 278
++ PST++ +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 279 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|195351039|ref|XP_002042044.1| GM26796 [Drosophila sechellia]
gi|195578729|ref|XP_002079216.1| GD23834 [Drosophila simulans]
gi|194123868|gb|EDW45911.1| GM26796 [Drosophila sechellia]
gi|194191225|gb|EDX04801.1| GD23834 [Drosophila simulans]
Length = 163
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++
Sbjct: 69 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDN 128
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 129 PHSANAAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 163
>gi|363744095|ref|XP_003642971.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 496
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 406 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 465
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 466 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 496
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 150 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 209
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 210 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 239
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ---TSKGCAFLKYETKEQALAALEAINGK 58
+P+N+ E ++ LF +G I +L +L+ Q S GCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRAQLPLKSMGCAFLTYCERESALKAQSALHEQ 118
Query: 59 HKMEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 119 KTLPGMNRPIQVKPADSE 136
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFG--FVSY---ESPASAQNAI 300
F+ FG++ V D+A K G F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRAQLPLKSMGCAFLTYCERESALKAQSAL 115
>gi|297300473|ref|XP_002805600.1| PREDICTED: CUGBP Elav-like family member 2-like [Macaca mulatta]
Length = 501
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 413 PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQA 472
Query: 299 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 473 AIQAMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|193204854|ref|NP_001122632.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
gi|151936119|gb|ABS18836.1| ELAV-type RNA binding protein variant E [Caenorhabditis elegans]
gi|351063348|emb|CCD71503.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
Length = 513
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 75/98 (76%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 409 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 468
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
KCFGFVSYE+ SA NAI+ MNG Q+G K+LKVQLK D
Sbjct: 469 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD 506
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E + +F+ +G I+D +LR S+GCAF+ + + A+ A + ++ M
Sbjct: 149 LSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 208
Query: 62 EGSSVPLVVKWADTEKERQAR 82
EG S PLVVK+ADT+K++ +
Sbjct: 209 EGCSAPLVVKFADTQKDKDVK 229
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E + LF YG++ ILR S Q SKGC F+ + ++ A+ A A++
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKV 121
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+EG P+ +K ADTE + +
Sbjct: 122 IEGMHHPVQMKPADTENRNERK 143
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 219 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 278
++ PST++ +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 279 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|363744097|ref|XP_003642972.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 495
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 405 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 464
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 465 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 495
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 149 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 208
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 209 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 238
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ---TSKGCAFLKYETKEQALAALEAINGK 58
+P+N+ E ++ LF +G I +L +L+ Q S GCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRAQLPLKSMGCAFLTYCERESALKAQSALHEQ 118
Query: 59 HKMEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 119 KTLPGMNRPIQVKPADSE 136
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFG--FVSY---ESPASAQNAI 300
F+ FG++ V D+A K G F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRAQLPLKSMGCAFLTYCERESALKAQSAL 115
>gi|363744104|ref|XP_003642974.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 491
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 401 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 460
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 146 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 206 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 235
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 119 LPGMNRPIQVKPADSESRGEDRK 141
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|118103583|ref|XP_424495.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 3 [Gallus
gallus]
Length = 492
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 402 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 461
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 462 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 492
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 146 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 206 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 235
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 119 LPGMNRPIQVKPADSESRGEDRK 141
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|158288347|ref|XP_310221.4| AGAP009477-PA [Anopheles gambiae str. PEST]
gi|157019207|gb|EAA05917.4| AGAP009477-PA [Anopheles gambiae str. PEST]
Length = 373
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 279 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQTNLSKCFGFVSFDN 338
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SAQ AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 339 VSSAQAAIQAMHGFQIGTKRLKVQLKRSKDASKPY 373
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEA--INGK 58
ML K +E +V LFS +GTI++ +LR SKGCAF+ + TK+ A+ A++ ++
Sbjct: 7 MLSKKYNENDVRQLFSGHGTIEECTVLRDPSGQSKGCAFVTFATKQAAIGAIKVSQLHQS 66
Query: 59 HKMEGSSVPLVVKWADTEKERQARRAQKAQS 89
MEG S PLVVK+ADT+KE+ A+R Q+ Q+
Sbjct: 67 KTMEGCSAPLVVKFADTQKEKDAKRMQQMQT 97
>gi|327285608|ref|XP_003227525.1| PREDICTED: CUGBP Elav-like family member 3-like [Anolis
carolinensis]
Length = 236
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 146 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 205
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 206 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 236
>gi|363744108|ref|XP_003642976.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 454
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q +GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PA
Sbjct: 362 QRDGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPA 421
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 422 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 146 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 206 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 235
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 119 LPGMNRPIQVKPADSESRGEDRK 141
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|449514107|ref|XP_002187309.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Taeniopygia
guttata]
Length = 492
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 402 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 461
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 462 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 492
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 145 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 205 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 234
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 119 LPGMNRPIQVKPADSE 134
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|345326924|ref|XP_003431098.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3
[Ornithorhynchus anatinus]
Length = 447
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 357 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 416
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 417 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G
Sbjct: 102 MLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQT 161
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 162 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 191
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LF+ IP+ +++L F+ FG++ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 9 LFVGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSAL 68
>gi|2565067|gb|AAB91444.1| CAGH4 [Homo sapiens]
Length = 358
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 268 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 327
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 328 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 358
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 29 GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQ 88
G +KGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+
Sbjct: 22 GQMAPAKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVA 81
Query: 89 SQ 90
+Q
Sbjct: 82 TQ 83
>gi|345326922|ref|XP_003431097.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2
[Ornithorhynchus anatinus]
Length = 448
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 358 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 417
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 418 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 448
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G
Sbjct: 103 MLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQT 162
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 163 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 192
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LF+ IP+ +++L F+ FG++ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 9 LFVGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSAL 68
>gi|256052032|ref|XP_002569583.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350646169|emb|CCD59153.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 682
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 69/92 (75%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
+ GP G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++ S
Sbjct: 591 LTGPEGCNLFIYHLPQEFGDNELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNHTS 650
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AQNAI MNG Q+G K+LKVQLKR KPY
Sbjct: 651 AQNAIQAMNGFQIGMKRLKVQLKRPKDSRKPY 682
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K+ +E ++ LF+ YG I++ ILR SKGCAF+K+ + +A A++ ++
Sbjct: 106 MLGKHQTEKDIQNLFAPYGLIEECTILRDQNGLSKGCAFVKFSSSTEAANAIDHMHNSQT 165
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN 92
M+G+S PLVVK+ADTEKERQ R+ Q QS N
Sbjct: 166 MQGASSPLVVKFADTEKERQVRK-QHQQSTTN 196
>gi|156352255|ref|XP_001622676.1| predicted protein [Nematostella vectensis]
gi|156209270|gb|EDO30576.1| predicted protein [Nematostella vectensis]
Length = 455
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G+NLFIYH+PQEF D +L FQ FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 366 GPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQ 425
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
NAI MNG Q+G K+LKVQLKR N+PY
Sbjct: 426 NAIQHMNGFQIGAKRLKVQLKRPKDANRPY 455
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ E ++ +F YG I +L IL+ KGCAFL + +++ AA + ++ K
Sbjct: 27 VPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKGCAFLTFCSRDACNAAQKHLHEKKT 86
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G P+ VK AD+E + R+
Sbjct: 87 LPGMHHPIQVKPADSETKSDDRK 109
>gi|449269404|gb|EMC80177.1| CUG-BP- and ETR-3-like factor 3, partial [Columba livia]
Length = 449
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 359 EGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 418
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 419 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 449
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E+++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 20 IPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKT 79
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 80 LPGMNRPIQVKPADSEGRGEDRK 102
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKG F + ++G
Sbjct: 107 MLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKG-GF--WGAGGAPHGCRHPLHGSQT 163
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 164 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 193
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 239 PPGA---------NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
PPGA LF+ IP+ + +L F+ FGR+ V D+ TG+ K F++
Sbjct: 1 PPGAIAMKDHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLT 60
Query: 290 YESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
Y + SA A A+ L G +Q+K + + +
Sbjct: 61 YCARDSALKAQSALHEQKTLPGMNRPIQVKPADSEGR 97
>gi|449282137|gb|EMC89034.1| CUG-BP- and ETR-3-like factor 4, partial [Columba livia]
Length = 361
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 271 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 330
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 331 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 361
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 15 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 74
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 75 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 104
>gi|118103585|ref|XP_001231286.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Gallus
gallus]
Length = 504
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q +GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PA
Sbjct: 412 QRDGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPA 471
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 472 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 504
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 146 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 206 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 235
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 119 LPGMNRPIQVKPADSESRGEDRK 141
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|149638168|ref|XP_001508614.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1
[Ornithorhynchus anatinus]
Length = 446
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SA
Sbjct: 356 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSA 415
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 446
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G
Sbjct: 101 MLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 161 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 190
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSEGRGEDRK 96
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LF+ IP+ +++L F+ FG++ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 9 LFVGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSAL 68
>gi|194385138|dbj|BAG60975.1| unnamed protein product [Homo sapiens]
Length = 260
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 170 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 229
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 230 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 260
>gi|269868208|gb|ACZ52410.1| Bruno-3 transcript variant 30 [Drosophila pseudoobscura]
Length = 330
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 234 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 293
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 294 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 330
>gi|334314036|ref|XP_003339980.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Monodelphis
domestica]
Length = 464
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 375 GPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASAQ 434
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG TSKGCAF+K+ ++ +A AA+ +++G
Sbjct: 147 MLGKQQSEEDVRRLFEPFGQIEECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQN 206
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 207 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 236
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 60 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSALHEQKT 119
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 120 LPGMNRPIQVKPADSEGRGEDRK 142
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 301
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y + SA A A
Sbjct: 54 KLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSA 113
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNK 325
+ L G +Q+K + + +
Sbjct: 114 LHEQKTLPGMNRPIQVKPADSEGR 137
>gi|307193708|gb|EFN76391.1| CUG-BP- and ETR-3-like factor 1 [Harpegnathos saltator]
Length = 385
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 73/98 (74%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ + QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 288 SNTDKQIEGPEGCNLFIYHLPQEFNDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVS 347
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++ +SAQ AI M+G Q+G K+LKVQLKR KPY
Sbjct: 348 YDNASSAQAAIQTMHGFQIGMKRLKVQLKRSKDACKPY 385
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +FS+YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSVYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
>gi|119573805|gb|EAW53420.1| trinucleotide repeat containing 4, isoform CRA_b [Homo sapiens]
Length = 353
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 263 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 322
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 323 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 353
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 14 LFSIYGTIKDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 72
+F +GTI + +LRG TSKG CAF+K++T +A AA+ ++ + G+S LVVK+
Sbjct: 1 MFEPFGTIDECTVLRGPDGTSKGSCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKF 60
Query: 73 ADTEKERQARRAQKAQSQ 90
ADTEKER RR Q+ +Q
Sbjct: 61 ADTEKERGLRRMQQVATQ 78
>gi|320545839|ref|NP_001189098.1| bruno-3, isoform K [Drosophila melanogaster]
gi|318069199|gb|ADV37534.1| bruno-3, isoform K [Drosophila melanogaster]
Length = 331
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 235 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 294
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 295 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 331
>gi|269868160|gb|ACZ52386.1| Bruno-3 transcript variant 19 [Drosophila pseudoobscura]
Length = 356
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 87/145 (60%), Gaps = 16/145 (11%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 271
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 272 NLFIYHLPQEFGDAELMQMFLPFGNVTSSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 331
Query: 303 MNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR ++PY
Sbjct: 332 MNGFQIGMKRLKVQLKRPKDASRPY 356
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|307175839|gb|EFN65654.1| CUG-BP- and ETR-3-like factor 4 [Camponotus floridanus]
Length = 278
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 76/106 (71%)
Query: 222 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
P T+ + G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT
Sbjct: 173 PMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFIDRATNQ 232
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 233 SKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDASRPY 278
>gi|269868204|gb|ACZ52408.1| Bruno-3 transcript variant 25 [Drosophila pseudoobscura]
Length = 347
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 251 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 310
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 311 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 347
>gi|269868164|gb|ACZ52388.1| Bruno-3 transcript variant 27 [Drosophila pseudoobscura]
Length = 341
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 245 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 304
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 305 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 341
>gi|269868152|gb|ACZ52382.1| Bruno-3 transcript variant 12 [Drosophila pseudoobscura]
Length = 375
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 279 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 338
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 339 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 375
>gi|45786151|gb|AAH68008.1| TNRC4 protein, partial [Homo sapiens]
Length = 407
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 317 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 376
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 377 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 407
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 43 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 102
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 103 LPGASSSLVVKFADTEKERGLRRMQQVATQ 132
>gi|345311730|ref|XP_001520496.2| PREDICTED: CUGBP Elav-like family member 5-like, partial
[Ornithorhynchus anatinus]
Length = 219
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 129 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASA 188
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N PY
Sbjct: 189 QTAIQAMNGFQIGMKRLKVQLKRPKDANHPY 219
>gi|383851701|ref|XP_003701370.1| PREDICTED: CUGBP Elav-like family member 4-like [Megachile
rotundata]
Length = 402
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 86/149 (57%), Gaps = 24/149 (16%)
Query: 179 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
F G YPAV G Q+P P P T+ + G I G
Sbjct: 278 FAGVAYPAVYG-QFPQAIP-----------------------QPMTAVAPTQREGCSISG 313
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P G NLFIYH+PQ+FGD +L F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 314 PEGCNLFIYHLPQDFGDSDLMQMFVPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAHA 373
Query: 299 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 374 AIQAMNGFQIGMKRLKVQLKRPKDTNRPY 402
>gi|119573804|gb|EAW53419.1| trinucleotide repeat containing 4, isoform CRA_a [Homo sapiens]
Length = 388
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 298 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 357
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 358 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 388
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 24 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 83
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 84 LPGASSSLVVKFADTEKERGLRRMQQVATQ 113
>gi|326674562|ref|XP_002664812.2| PREDICTED: CUGBP Elav-like family member 3-like [Danio rerio]
Length = 442
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PA
Sbjct: 350 QREGPEGCNVFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPA 409
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 410 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 442
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 60/90 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K S+ +V +F +G I + +LRG TSKGCAF+K+++ +A +A+ +++G
Sbjct: 101 MLGKQQSDEDVRKIFEPFGGIDECTVLRGPDGTSKGCAFVKFQSHSEAQSAINSLHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ SQ
Sbjct: 161 LPGASSSLVVKFADTEKERGVRRMQQVTSQ 190
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F YG I +L +++ KGCAFL Y +E A+ A A++ +
Sbjct: 14 IPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARESAIKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSEGRGEDRK 96
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ +G++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 AIKAQSAL 68
>gi|397492762|ref|XP_003817289.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Pan paniscus]
gi|426331467|ref|XP_004026702.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Gorilla
gorilla gorilla]
Length = 417
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 327 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 386
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 387 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 417
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 54 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 113
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 114 LPGASSSLVVKFADTEKERGLRRMQQVATQ 143
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 83
GCAFL Y ++ AL A A++ + + G + P+ VK AD+E + R+
Sbjct: 2 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRK 49
>gi|289547602|ref|NP_001166119.1| CUGBP Elav-like family member 3 isoform 2 [Homo sapiens]
Length = 418
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 328 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 387
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 388 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 418
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 54 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 113
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 114 LPGASSSLVVKFADTEKERGLRRMQQVATQ 143
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 83
GCAFL Y ++ AL A A++ + + G + P+ VK AD+E + R+
Sbjct: 2 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRK 49
>gi|148706790|gb|EDL38737.1| trinucleotide repeat containing 4, isoform CRA_c [Mus musculus]
Length = 567
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 477 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 536
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 537 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 567
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 174 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 233
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 234 LPGASSSLVVKFADTEKERGLRRMQQVATQ 263
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 87 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 146
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 147 LPGMNRPIQVKPADSESRGEDRK 169
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 220 SNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
S+P + + G + ++ P LF+ IP+ +++L F+ FGR+ V DK T
Sbjct: 58 SSPCSPTPGPSSWAAPMKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYT 117
Query: 280 GVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
G+ K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 118 GLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 164
>gi|297279975|ref|XP_002801847.1| PREDICTED: CUGBP Elav-like family member 3-like, partial [Macaca
mulatta]
Length = 438
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 348 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 407
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 408 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 438
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 69 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 128
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 129 LPGASSSLVVKFADTEKERGLRRMQQVATQ 158
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 35 KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 83
KGCAFL Y ++ AL A A++ + + G + P+ VK AD+E + R+
Sbjct: 16 KGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRK 64
>gi|35505365|gb|AAH57553.1| Tnrc4 protein [Mus musculus]
Length = 494
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 404 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 463
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 464 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 494
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|148706789|gb|EDL38736.1| trinucleotide repeat containing 4, isoform CRA_b [Mus musculus]
Length = 467
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 377 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 436
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 437 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 467
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 102 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 161
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 162 LPGASSSLVVKFADTEKERGLRRMQQVATQ 191
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 16 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 75
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 76 LPGMNRPIQVKPADSE 91
>gi|47219454|emb|CAG10818.1| unnamed protein product [Tetraodon nigroviridis]
Length = 413
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 323 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 382
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 383 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 413
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 19 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 78
G + +Q+ ++ GCAF+KY++ +A AA+ ++G + G+S LVVK+AD+EKE
Sbjct: 79 GMNRPIQVKPADSESRGGCAFVKYQSNAEAQAAINTLHGSRTLPGASSSLVVKFADSEKE 138
Query: 79 RQARRAQKAQSQ 90
R RR Q+ SQ
Sbjct: 139 RSLRRMQQVASQ 150
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 MKEPDAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 63
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
AQNA+ L G +Q+K + +++
Sbjct: 64 ALKAQNALHEQKT--LPGMNRPIQVKPADSESR 94
>gi|363744110|ref|XP_003642977.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 465
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PA
Sbjct: 373 QYAGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPA 432
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 433 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 119 LPGMNRPIQVKPADSESRGEDRK 141
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|354503685|ref|XP_003513911.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Cricetulus
griseus]
Length = 491
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 401 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 460
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|47221605|emb|CAF97870.1| unnamed protein product [Tetraodon nigroviridis]
Length = 400
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D EL F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 310 EGPEGCNIFIYHLPQEFSDSELLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 369
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 370 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 400
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 57/163 (34%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQAL----------- 49
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL
Sbjct: 17 IPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKT 76
Query: 50 ---------------------------------AALEAINGKHKMEGSSVPLVVKWADTE 76
AA+ +++G M G+S LVVK+ADTE
Sbjct: 77 LPGMNRPIQVKPADSEGRGGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTE 136
Query: 77 KERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 119
KER RR Q+ SQ +FG + + + P YN Y
Sbjct: 137 KERGLRRMQQVASQLG-----------IFGPMTLNF-PAYNAY 167
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQ+A
Sbjct: 11 KLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 70
Query: 300 I 300
+
Sbjct: 71 L 71
>gi|332220299|ref|XP_003259294.1| PREDICTED: CUGBP Elav-like family member 3 [Nomascus leucogenys]
Length = 467
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 377 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 436
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 437 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 467
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|21410087|gb|AAH30835.1| Bruno-like 6, RNA binding protein (Drosophila) [Homo sapiens]
Length = 481
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 70/93 (75%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LK QLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKAQLKRPKDANRPY 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQ 225
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|395855962|ref|XP_003800412.1| PREDICTED: CUGBP Elav-like family member 3 [Otolemur garnettii]
Length = 475
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 385 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 444
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 445 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 475
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|148706793|gb|EDL38740.1| trinucleotide repeat containing 4, isoform CRA_f [Mus musculus]
Length = 466
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 376 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 435
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 436 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 466
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|148706788|gb|EDL38735.1| trinucleotide repeat containing 4, isoform CRA_a [Mus musculus]
Length = 287
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 197 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 256
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 257 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 287
>gi|395535951|ref|XP_003769984.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Sarcophilus
harrisii]
Length = 458
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 368 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 427
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 428 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSENRGEDRK 96
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|148706791|gb|EDL38738.1| trinucleotide repeat containing 4, isoform CRA_d [Mus musculus]
Length = 538
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 448 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 507
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 508 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 538
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 173 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 232
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 233 LPGASSSLVVKFADTEKERGLRRMQQVATQ 262
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 87 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 146
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 147 LPGMNRPIQVKPADSE 162
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 220 SNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
S+P + + G + ++ P LF+ IP+ +++L F+ FGR+ V DK T
Sbjct: 58 SSPCSPTPGPSSWAAPMKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYT 117
Query: 280 GVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
G+ K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 118 GLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 164
>gi|62088108|dbj|BAD92501.1| trinucleotide repeat containing 4 variant [Homo sapiens]
Length = 441
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 351 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 410
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 411 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 441
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 77 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 136
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 137 LPGASSSLVVKFADTEKERGLRRMQQVATQ 166
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 36 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 83
GCAFL Y ++ AL A A++ + + G + P+ VK AD+E + R+
Sbjct: 25 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRK 72
>gi|440906742|gb|ELR56971.1| CUGBP Elav-like family member 3, partial [Bos grunniens mutus]
Length = 476
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 386 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 445
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 446 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 476
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILR--GSQQTSKGCAFLKYETKEQALAALEAINGK 58
ML K ++ +V +F +GTI + L S S GCAF+K++T +A AA+ ++
Sbjct: 113 MLGKQQTDEDVRKMFEPFGTIDEWWALTPSSSLLNSSGCAFVKFQTHAEAQAAINTLHSS 172
Query: 59 HKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 173 RTLPGASSSLVVKFADTEKERGLRRMQQVATQ 204
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 15 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 74
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 75 LPGMNRPIQVKPADSE 90
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 2 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 61
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 62 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 92
>gi|432881561|ref|XP_004073841.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 374
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 284 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 343
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 344 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 374
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 63/90 (70%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++A+V +F +G+I++ +LRG TSKGCAF+K+++ +A AA+ A++G
Sbjct: 25 MLGKQQTDADVRKMFEPFGSIEECTVLRGPDGTSKGCAFVKFQSNAEAQAAINALHGSRT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+AD+EKER RR Q+ SQ
Sbjct: 85 LPGASSSLVVKFADSEKERGLRRMQQVASQ 114
>gi|27369577|ref|NP_766022.1| CUGBP Elav-like family member 3 [Mus musculus]
gi|81914478|sp|Q8CIN6.1|CELF3_MOUSE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|25807803|gb|AAN73885.1| CUG-BP and ETR-3 like factor 3 [Mus musculus]
Length = 465
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 100 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 159
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 160 LPGASSSLVVKFADTEKERGLRRMQQVATQ 189
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|219520290|gb|AAI43227.1| TNRC4 protein [Homo sapiens]
Length = 464
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 100 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 159
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 160 LPGASSSLVVKFADTEKERGLRRMQQVATQ 189
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|25807801|gb|AAN73884.1| CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 465
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|12746392|gb|AAK07474.1|AF329264_1 CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 462
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 372 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 431
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|359321739|ref|XP_003639689.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Canis
lupus familiaris]
Length = 462
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 372 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 431
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|71164894|ref|NP_009116.3| CUGBP Elav-like family member 3 isoform 1 [Homo sapiens]
gi|149751259|ref|XP_001492746.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Equus
caballus]
gi|74756184|sp|Q5SZQ8.1|CELF3_HUMAN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName: Full=CAG
repeat protein 4; AltName: Full=CUG-BP- and ETR-3-like
factor 3; AltName: Full=ELAV-type RNA-binding protein 1;
Short=ETR-1; AltName: Full=Expanded repeat domain
protein CAG/CTG 4; AltName: Full=RNA-binding protein
BRUNOL-1; AltName: Full=Trinucleotide repeat-containing
gene 4 protein
gi|85397642|gb|AAI04759.1| Trinucleotide repeat containing 4 [Homo sapiens]
gi|119573806|gb|EAW53421.1| trinucleotide repeat containing 4, isoform CRA_c [Homo sapiens]
gi|168278104|dbj|BAG11030.1| trinucleotide repeat-containing 4 protein [synthetic construct]
Length = 465
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|410968366|ref|XP_003990678.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Felis catus]
Length = 463
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 373 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 432
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 433 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 463
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|355558428|gb|EHH15208.1| hypothetical protein EGK_01267 [Macaca mulatta]
Length = 469
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 379 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 438
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 439 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 469
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|348586638|ref|XP_003479075.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Cavia
porcellus]
Length = 463
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 373 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 432
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 433 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 463
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|350583381|ref|XP_003481499.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Sus scrofa]
gi|397492758|ref|XP_003817287.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Pan paniscus]
gi|426331463|ref|XP_004026700.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gorilla
gorilla gorilla]
Length = 464
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|284005526|ref|NP_001164779.1| CUGBP Elav-like family member 3 [Oryctolagus cuniculus]
gi|217030863|gb|ACJ74025.1| trinucleotide repeat containing 4 (predicted) [Oryctolagus
cuniculus]
Length = 466
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 376 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 435
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 436 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 466
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|281182934|ref|NP_001162429.1| CUGBP Elav-like family member 3 [Papio anubis]
gi|163781027|gb|ABY40803.1| trinucleotide repeat containing 4 (predicted) [Papio anubis]
Length = 471
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 381 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 440
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 441 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 471
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|157821951|ref|NP_001102660.1| CUG-BP- and ETR-3-like factor 3 [Rattus norvegicus]
gi|149030747|gb|EDL85784.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 473
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 383 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 442
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 443 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 473
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|226371663|ref|NP_001139766.1| CUGBP Elav-like family member 4 isoform C [Mus musculus]
gi|27753638|gb|AAO22167.1| bruno-like 4 protein [Mus musculus]
Length = 495
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 405 EGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 464
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 465 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 495
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 147 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 206
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 207 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 236
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|71297206|gb|AAH52491.1| Trinucleotide repeat containing 4 [Homo sapiens]
Length = 464
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAKAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|116003913|ref|NP_001070313.1| CUGBP Elav-like family member 3 [Bos taurus]
gi|122132428|sp|Q08E07.1|CELF3_BOVIN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|115305254|gb|AAI23481.1| Trinucleotide repeat containing 4 [Bos taurus]
gi|296489556|tpg|DAA31669.1| TPA: CUG-BP- and ETR-3-like factor 3 [Bos taurus]
Length = 461
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 371 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 430
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 431 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 461
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|403302658|ref|XP_003941971.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403302660|ref|XP_003941972.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 464
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSENRGEDRK 96
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|354503687|ref|XP_003513912.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Cricetulus
griseus]
Length = 462
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 372 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 431
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 100 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 159
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 160 LPGASSSLVVKFADTEKERGLRRMQQVATQ 189
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|344275414|ref|XP_003409507.1| PREDICTED: CUGBP Elav-like family member 3 [Loxodonta africana]
Length = 420
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 330 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 389
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 390 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 420
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|296228815|ref|XP_002759970.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Callithrix
jacchus]
Length = 465
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSENRGEDRK 96
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|126313728|ref|XP_001366642.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Monodelphis
domestica]
Length = 458
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 368 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 427
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 428 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSENRGEDRK 96
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +N+
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|183637597|gb|ACC64599.1| trinucleotide repeat containing 4 (predicted) [Rhinolophus
ferrumequinum]
Length = 459
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 369 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 428
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 429 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 459
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ SQ
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVASQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|148664596|gb|EDK97012.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_c [Mus
musculus]
Length = 510
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 420 EGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 479
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 480 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 510
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 163 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 222
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 223 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 252
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 67 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 126
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 127 LPGMNRPIQVKPADSE 142
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 62 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 121
>gi|307192008|gb|EFN75398.1| CUG-BP- and ETR-3-like factor 4 [Harpegnathos saltator]
Length = 278
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 76/106 (71%)
Query: 222 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
P T+ + G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT
Sbjct: 173 PMTAVAPTQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFIDRATNQ 232
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 233 SKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 278
>gi|149030744|gb|EDL85781.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_a [Rattus norvegicus]
gi|149030746|gb|EDL85783.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 270
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 180 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 239
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 240 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 270
>gi|148664598|gb|EDK97014.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_e [Mus
musculus]
Length = 501
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 411 EGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 470
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 471 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 501
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 153 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 212
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 213 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 242
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 67 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 126
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 127 LPGMNRPIQVKPADSE 142
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 62 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 121
>gi|226371659|ref|NP_001139764.1| CUGBP Elav-like family member 4 isoform A [Mus musculus]
gi|29387384|gb|AAH48405.1| Brunol4 protein [Mus musculus]
Length = 504
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 414 EGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 473
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 474 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 504
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 157 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 216
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 217 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 246
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|289547605|ref|NP_001166120.1| CUGBP Elav-like family member 3 isoform 3 [Homo sapiens]
gi|338725073|ref|XP_003365077.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Equus
caballus]
gi|119573807|gb|EAW53422.1| trinucleotide repeat containing 4, isoform CRA_d [Homo sapiens]
Length = 415
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 325 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 384
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 385 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 415
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|68072247|ref|XP_678037.1| RNA binding protein [Plasmodium berghei strain ANKA]
gi|56498375|emb|CAI00313.1| RNA binding protein, putative [Plasmodium berghei]
Length = 318
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 152/323 (47%), Gaps = 80/323 (24%)
Query: 4 KNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKME 62
KN++E + +FS+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +E
Sbjct: 1 KNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLE 60
Query: 63 GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQ 122
G + P+ V++A+ + +Q++
Sbjct: 61 GCNRPVEVRFAEPKSSKQSQS--------------------------------------- 81
Query: 123 ASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG---NAMRGASPDLSSNMGPRNYAMPPSGF 179
Q + P+QN P HGI P + G N G + +++N PR + +
Sbjct: 82 --------QLGIQPIQNAP--HGISPQAHPGTPNNINYGNNFGVNNNY-PRQVGVWKEYY 130
Query: 180 VGSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGG 234
G G P Q+ MP L +NN+P N S SS
Sbjct: 131 SGEGRPYYYNEQTNTTQWEMPKEFETLF---MNNNPNI-------HNLSDSS-------- 172
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
GPPGANLFI+H+P E+ +L AF FG +LSA++ +K TG ++ F FVSYE+
Sbjct: 173 ---GPPGANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYENIE 229
Query: 295 SAQNAIAMMNGCQLGGKKLKVQL 317
SA AI+ MNG KKLKV +
Sbjct: 230 SAAAAISQMNGFMALNKKLKVTV 252
>gi|410921162|ref|XP_003974052.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Takifugu
rubripes]
Length = 528
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 438 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 497
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 498 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 528
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G
Sbjct: 172 MLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQT 231
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q FG A P++ Y
Sbjct: 232 MPGASSSLVVKFADTDKERTIRRMQQMVGQ--------------FGIFNPAIALPFSTY- 276
Query: 121 YQASGSYGLMQ 131
+S ++ LMQ
Sbjct: 277 --SSYAHALMQ 285
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E A+ A A++ +
Sbjct: 85 IPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKT 144
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 145 LPGMTRPIQVKPADSESRGEDRK 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 290
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
ES AQNA+ L G +Q+K + +++
Sbjct: 130 ESAIKAQNALHEQKT--LPGMTRPIQVKPADSESR 162
>gi|410911840|ref|XP_003969398.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 458
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 368 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 427
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 428 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++A+V +F +G+I++ +LRG TSKGCAF+KY++ +A AA+ A++G
Sbjct: 106 MLGKQQTDADVRKMFEPFGSIEECTVLRGPDGTSKGCAFVKYQSNAEAQAAISALHGSRT 165
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+AD+EKER RR Q+ SQ
Sbjct: 166 LPGASSSLVVKFADSEKERSLRRMQQVASQ 195
>gi|195546832|ref|NP_001124260.1| CUGBP Elav-like family member 5 [Danio rerio]
gi|190339155|gb|AAI63416.1| Brunol5 protein [Danio rerio]
Length = 528
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 438 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 497
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 498 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 528
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G
Sbjct: 172 MLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQT 231
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q FG A P++ Y
Sbjct: 232 MPGASSSLVVKFADTDKERTIRRMQQMVGQ--------------FGIFNPAIALPFSTY- 276
Query: 121 YQASGSYGLMQ 131
++ ++ LMQ
Sbjct: 277 --STYAHALMQ 285
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E A+ A A++ +
Sbjct: 85 IPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKT 144
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 145 LPGMTRPIQVKPADSESRGEDRK 167
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 290
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GTMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
ES AQNA+ L G +Q+K + +++
Sbjct: 130 ESAIKAQNALHEQKT--LPGMTRPIQVKPADSESR 162
>gi|7670536|dbj|BAA95118.1| Etr-1 [Danio rerio]
Length = 452
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 362 EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 421
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 422 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 452
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 63/90 (70%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +S+A+V +F +G+I++ +LRG SKGCAF+KY++ +A AA+ A++G
Sbjct: 100 MLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRT 159
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ SQ
Sbjct: 160 LPGASSSLVVKFADTEKERGIRRMQQVASQ 189
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQNA
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNA 67
Query: 300 I 300
+
Sbjct: 68 L 68
>gi|42476252|ref|NP_571569.2| CUGBP Elav-like family member 3 [Danio rerio]
gi|152013393|sp|Q9IBD1.2|CELF3_DANRE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|38173873|gb|AAH60923.1| Trinucleotide repeat containing 4 [Danio rerio]
Length = 452
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 362 EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 421
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 422 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 452
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 63/90 (70%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +S+A+V +F +G+I++ +LRG SKGCAF+KY++ +A AA+ A++G
Sbjct: 100 MLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRT 159
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ SQ
Sbjct: 160 LPGASSSLVVKFADTEKERGIRRMQQVASQ 189
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQNA
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNA 67
Query: 300 I 300
+
Sbjct: 68 L 68
>gi|348527714|ref|XP_003451364.1| PREDICTED: CUGBP Elav-like family member 5-like [Oreochromis
niloticus]
Length = 529
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 439 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 498
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 499 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 529
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G
Sbjct: 172 MLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQT 231
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q FG A P++ Y
Sbjct: 232 MPGASSSLVVKFADTDKERTIRRMQQMVGQ--------------FGIFNPAIALPFSTY- 276
Query: 121 YQASGSYGLMQ 131
+S ++ LMQ
Sbjct: 277 --SSYAHALMQ 285
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E A+ A A++ +
Sbjct: 85 IPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKT 144
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 145 LPGMTRPIQVKPADSESRGEDRK 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 290
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
ES AQNA+ L G +Q+K + +++
Sbjct: 130 ESAIKAQNALHEQKT--LPGMTRPIQVKPADSESR 162
>gi|363742939|ref|XP_003642747.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gallus
gallus]
Length = 451
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 361 EGPEGCNIFIYHLPQEFADTEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 420
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 421 QAAIHAMNGFQIGMKRLKVQLKRPKDANRPY 451
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|47215645|emb|CAG01362.1| unnamed protein product [Tetraodon nigroviridis]
Length = 264
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 174 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 233
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 234 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 264
>gi|363742943|ref|XP_003642748.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gallus
gallus]
Length = 464
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 374 EGPEGCNIFIYHLPQEFADTEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 433
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 QAAIHAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K+++ +A AA+ A++G
Sbjct: 101 MLSKQQADEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ SQ
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVASQ 190
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|320545841|ref|NP_001189099.1| bruno-3, isoform L [Drosophila melanogaster]
gi|318069200|gb|ADV37535.1| bruno-3, isoform L [Drosophila melanogaster]
Length = 345
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 251 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 310
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 311 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 345
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|348529973|ref|XP_003452486.1| PREDICTED: CUGBP Elav-like family member 3-like [Oreochromis
niloticus]
Length = 453
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SA
Sbjct: 363 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSA 422
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 423 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 453
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 63/90 (70%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++A+V +F +G+I++ +LRG TSKGCAF+K+++ +A AA+ A++G
Sbjct: 101 MLGKQQTDADVRKMFEPFGSIEECTVLRGPDGTSKGCAFVKFQSNAEAQAAINALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+AD+EKER RR Q+ SQ
Sbjct: 161 LPGASSSLVVKFADSEKERGLRRMQQVASQ 190
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQNA+
Sbjct: 61 ALKAQNAL 68
>gi|269868320|gb|ACZ52464.1| Bruno-3 transcript variant 28 [Drosophila persimilis]
Length = 336
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
>gi|269868202|gb|ACZ52407.1| Bruno-3 transcript variant 21 [Drosophila pseudoobscura]
Length = 353
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT +SKCFGFVS+++
Sbjct: 259 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNLSKCFGFVSFDN 318
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G ++LKVQLKR ++PY
Sbjct: 319 PASAQAAIQAMNGFQIGMERLKVQLKRPKDASRPY 353
>gi|269868146|gb|ACZ52379.1| Bruno-3 transcript variant 6 [Drosophila pseudoobscura]
Length = 395
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 301 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 360
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 361 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 395
>gi|269868172|gb|ACZ52392.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
gi|269868176|gb|ACZ52394.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
>gi|432853507|ref|XP_004067741.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Oryzias
latipes]
Length = 529
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 439 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASA 498
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 499 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 529
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ +LRG SKGCAF+K+ +A +A+ A++G
Sbjct: 171 MLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQT 230
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q FG A P++ Y
Sbjct: 231 MPGASSSLVVKFADTDKERTIRRMQQMVGQ--------------FGIFNPAIALPFSTY- 275
Query: 121 YQASGSYGLMQ 131
+S ++ LMQ
Sbjct: 276 --SSYAHALMQ 284
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E A+ A A++ +
Sbjct: 84 IPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKT 143
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 144 LPGMTRPIQVKPADSESRGEDRK 166
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 290
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 69 GAMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 128
Query: 291 ESPASAQNAI 300
ES AQNA+
Sbjct: 129 ESAIKAQNAL 138
>gi|426218925|ref|XP_004003685.1| PREDICTED: CUGBP Elav-like family member 3 [Ovis aries]
Length = 449
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 359 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 418
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 419 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 449
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|349802871|gb|AEQ16908.1| putative cug triplet rna binding protein 2 [Pipa carvalhoi]
Length = 90
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP GA+LFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 1 GPEGASLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 60
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 61 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 90
>gi|348526886|ref|XP_003450950.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1
[Oreochromis niloticus]
Length = 458
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 368 EGPEGCNIFIYHLPQEFSDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 427
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 428 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 12/119 (10%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K S+ +V LF +G+I + +LRG TSKGCAF+K++ +A AA+ +++G
Sbjct: 101 MLGKQQSDEDVRRLFEPFGSIDECTVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 119
M G+S LVVK+ADTEKER RR Q+ SQ +F + + + P YN Y
Sbjct: 161 MPGASSSLVVKFADTEKERGLRRMQQVASQLG-----------IFSPMTLNF-PAYNAY 207
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSEGRGEDRK 96
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQ+A
Sbjct: 8 KLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 300 I 300
+
Sbjct: 68 L 68
>gi|320545831|ref|NP_001189094.1| bruno-3, isoform G [Drosophila melanogaster]
gi|318069195|gb|ADV37530.1| bruno-3, isoform G [Drosophila melanogaster]
Length = 390
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 296 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 355
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 356 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 390
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|320545829|ref|NP_001189093.1| bruno-3, isoform F [Drosophila melanogaster]
gi|318069194|gb|ADV37529.1| bruno-3, isoform F [Drosophila melanogaster]
Length = 337
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 243 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 302
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 303 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 337
>gi|320545835|ref|NP_001189096.1| bruno-3, isoform I [Drosophila melanogaster]
gi|318069197|gb|ADV37532.1| bruno-3, isoform I [Drosophila melanogaster]
Length = 384
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 290 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 349
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 350 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 384
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 41 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 100
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 101 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 134
>gi|320545823|ref|NP_001189090.1| bruno-3, isoform C [Drosophila melanogaster]
gi|318069191|gb|ADV37526.1| bruno-3, isoform C [Drosophila melanogaster]
Length = 396
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 302 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 361
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 362 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 396
>gi|449491676|ref|XP_002192940.2| PREDICTED: LOW QUALITY PROTEIN: bruno-like 5, RNA binding protein
[Taeniopygia guttata]
Length = 370
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++P+SA
Sbjct: 280 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSA 339
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N PY
Sbjct: 340 QTAIQAMNGFQIGMKRLKVQLKRPKDANHPY 370
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G
Sbjct: 25 MLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 85 MPGASSSLVVKFADTDKERTLRRMQQMVGQ 114
>gi|269868322|gb|ACZ52465.1| Bruno-3 transcript variant 33 [Drosophila persimilis]
Length = 137
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 43 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 102
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 103 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 137
>gi|269868182|gb|ACZ52397.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
>gi|320545825|ref|NP_001189091.1| bruno-3, isoform D [Drosophila melanogaster]
gi|318069192|gb|ADV37527.1| bruno-3, isoform D [Drosophila melanogaster]
Length = 382
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 288 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 347
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 348 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 382
>gi|269868307|gb|ACZ52458.1| Bruno-3 transcript variant 9 [Drosophila persimilis]
Length = 381
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
>gi|443723647|gb|ELU11974.1| hypothetical protein CAPTEDRAFT_144233 [Capitella teleta]
Length = 461
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP GANLFIYH+PQEF DQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 372 GPDGANLFIYHLPQEFADQDLMQMFLPFGTVISAKVFIDKQTNLSKCFGFVSYDNPMSAQ 431
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 432 AAIQAMNGFQIGMKRLKVQLKRPKSDSKPY 461
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E+++ +F +G + L +LR SKGC F+ + T++ AL A ++
Sbjct: 23 IPRSMDESDLRKMFEEFGPVFQLNVLRDKVTGQSKGCCFVTFYTRKSALEAQNQLHNIKT 82
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
M G P+ +K AD EK + R+
Sbjct: 83 MAGMQHPIQMKPADCEKRNEERK 105
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G+G P +F+ IP+ + +L F+ FG V V DK TG SK FV++
Sbjct: 5 GTGKTEPDPDAIKMFVGQIPRSMDESDLRKMFEEFGPVFQLNVLRDKVTGQSKGCCFVTF 64
Query: 291 ESPASAQNA 299
+ SA A
Sbjct: 65 YTRKSALEA 73
>gi|335292432|ref|XP_003356730.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 3 [Sus scrofa]
Length = 453
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 364 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 423
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 424 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 453
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|269868184|gb|ACZ52398.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNPSKCFGFVSFDN 346
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
>gi|50540190|ref|NP_001002562.1| CUGBP Elav-like family member 4 [Danio rerio]
gi|82235921|sp|Q6DGV1.1|CELF4_DANRE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|49904554|gb|AAH76238.1| Zgc:92761 [Danio rerio]
Length = 520
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++P SA
Sbjct: 430 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 489
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 490 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 520
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G+I++ ILRG SKGCAF+KY T +A AA+ A++G
Sbjct: 141 MLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 201 MPGASSSLVVKFADTDKERTIRRMQQMAGQ 230
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 54 IPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTALHEQKT 113
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 114 LPGMNRPIQVKPADSESRGEDRK 136
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ A+
Sbjct: 49 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTAL 108
>gi|410920283|ref|XP_003973613.1| PREDICTED: CUGBP Elav-like family member 4-like [Takifugu rubripes]
Length = 530
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++P SA
Sbjct: 440 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 499
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 500 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 530
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG------CAFLKYETKEQALAALEA 54
ML K SE +V LF +G I++ ILRG SKG C+ +K+ + +A AA+ A
Sbjct: 145 MLNKQQSEDDVRRLFESFGCIEECTILRGPDGNSKGELGAASCSIVKFSSHAEAQAAISA 204
Query: 55 INGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 205 LHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQ 240
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 58 IPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNALHEQKT 117
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 118 LPGMNRPIQVKPADSESRGEDRK 140
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 53 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNAL 112
>gi|395822451|ref|XP_003784531.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Otolemur
garnettii]
Length = 454
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 365 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 424
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 425 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|317419091|emb|CBN81129.1| CUG-BP-and ETR-3-like factor 4 [Dicentrarchus labrax]
Length = 527
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++P SA
Sbjct: 437 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 496
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 497 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 527
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G+I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 140 MLNKQQSEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 200 MPGASSSLVVKFADTDKERTIRRMQQMAGQ 229
>gi|348508140|ref|XP_003441613.1| PREDICTED: CUGBP Elav-like family member 4-like [Oreochromis
niloticus]
Length = 524
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++P SA
Sbjct: 434 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 493
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 494 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 524
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G+I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 145 MLNKQQSEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 205 MPGASSSLVVKFADTDKERTIRRMQQMAGQ 234
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 58 IPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNALHEQKT 117
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 118 LPGMNRPIQVKPADSESRGEDRK 140
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 53 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNAL 112
>gi|10185822|gb|AAG14457.1|AF284423_1 RNA-binding protein BRUNOL1 [Homo sapiens]
Length = 140
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 50 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 109
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 110 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 140
>gi|391330723|ref|XP_003739804.1| PREDICTED: CUGBP Elav-like family member 3-like [Metaseiulus
occidentalis]
Length = 484
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL + F FG V+SAKVF+D+AT SKCFGFVS+++
Sbjct: 392 QREGPEGCNLFIYHLPQEFGDAELTHMFLPFGNVISAKVFIDRATNQSKCFGFVSFDNQN 451
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ+AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 452 SAQSAIQAMNGFQIGMKRLKVQLKRPKDASRPY 484
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E ++ LF +G+I++ ILRG SKGCAF+K+ T +A+ A+ A++G
Sbjct: 13 MLGKQQNEEDIRDLFQGFGSIEECTILRGPDGHSKGCAFVKFSTHNEAMNAIAALHGSQT 72
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
M G+S +VVK+ADTE+ERQ RR
Sbjct: 73 MPGASSTIVVKFADTERERQMRR 95
>gi|326505362|dbj|BAK03068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 601
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 74/98 (75%)
Query: 222 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 281
PS S +G EGP GANLFIYH+PQE+ D +L AF ++G+++SAKVFVDK T
Sbjct: 461 PSQSYITAQVAGKHTEGPDGANLFIYHLPQEYNDTDLAQAFASYGQIISAKVFVDKTTNR 520
Query: 282 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLK+
Sbjct: 521 SKCFGFVSFDNPASAQAAINQMNGFQIGMKRLKVQLKK 558
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 63/93 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ KN+ E + +LF YGTI+D +LR + S+GCAF+ ++ ++ AL A+++++
Sbjct: 130 MVSKNLDEPNIRSLFQSYGTIEDCTVLRDANGKSRGCAFVTFQKRQCALNAIKSMHQSQT 189
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANN 93
MEG S PLVVK+ADT K+++ ++ Q+ + NN
Sbjct: 190 MEGCSSPLVVKFADTPKDKETKKIQQQYTTHNN 222
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ EAE+ +F +G + L +LR Q SKGC F+ + +++ AL A A++
Sbjct: 44 IPRNMHEAELRDMFEQFGPVFQLNVLRDKQTGESKGCCFVTFYSRKSALDAQNALHNLRT 103
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ GS P+ +K ADTE + +
Sbjct: 104 LNGSHHPIQMKPADTENRNERK 125
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F IP+ + EL + F+ FG V V DK TG SK FV++ S SA +
Sbjct: 34 PDAIKMFCGQIPRNMHEAELRDMFEQFGPVFQLNVLRDKQTGESKGCCFVTFYSRKSALD 93
Query: 299 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N L G +Q+K + +N+
Sbjct: 94 AQNALHNLRTLNGSHHPIQMKPADTENR 121
>gi|268561214|ref|XP_002646391.1| C. briggsae CBR-UNC-75 protein [Caenorhabditis briggsae]
Length = 550
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 72/97 (74%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G + GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVSY
Sbjct: 454 ACDGSMLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHVVSAKVFVDRATNQSKCFGFVSY 513
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++ S+Q AIA MNG Q+G K+LKVQLKR + ++PY
Sbjct: 514 DNIHSSQAAIAAMNGFQIGMKRLKVQLKRPREASRPY 550
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF+ +G + ++ +LRG+ SKGCAF+KY++ A A+ A++G
Sbjct: 130 MLSKQQSEDDVRTLFAAFGELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQT 189
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ +Q L
Sbjct: 190 MPGASSSLVVKYADTEKERQNRRMQQMAAQMGML 223
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
++S+S +G ++ LF+ IP+ +++L + F+ FG++ + DK TG+
Sbjct: 10 ASSTSSTDSNGFPVKDADAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMH 69
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 326
K F+++ SAQ ++ + L G +Q+K + ++P
Sbjct: 70 KGCAFLTFCHRDSAQRCQTTLHDQKTLPGMNRAMQVKPADTDSRP 114
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I + IL+ KGCAFL + ++ A ++ +
Sbjct: 36 IPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTFCHRDSAQRCQTTLHDQKT 95
Query: 61 MEGSSVPLVVKWADTE 76
+ G + + VK ADT+
Sbjct: 96 LPGMNRAMQVKPADTD 111
>gi|148706792|gb|EDL38739.1| trinucleotide repeat containing 4, isoform CRA_e [Mus musculus]
Length = 447
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 358 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 417
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 418 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 15 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 74
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 75 LPGMNRPIQVKPADSE 90
>gi|147905119|ref|NP_001080695.1| CUGBP Elav-like family member 3-B [Xenopus laevis]
gi|82241483|sp|Q7ZWM3.1|CEL3B_XENLA RecName: Full=CUGBP Elav-like family member 3-B; Short=CELF3-B;
AltName: Full=Bruno-like protein 1-B; AltName:
Full=CUG-BP- and ETR-3-like factor 3-B; AltName:
Full=ELAV-type RNA-binding protein 1-B; Short=ETR-1-B;
AltName: Full=RNA-binding protein BRUNOL-1-B; AltName:
Full=Trinucleotide repeat-containing gene 4 protein B
gi|28422663|gb|AAH46942.1| Tnrc4-prov protein [Xenopus laevis]
Length = 462
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 211 GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 270
G VSPA P+ + Q EGP G N+FIYH+PQEF D E+ F FG V+S
Sbjct: 347 GLVSPAFTQP-PAILTQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVIS 405
Query: 271 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 406 AKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +G I + +LRG TSKGCAF+K++T +A AA+ A++G
Sbjct: 101 MLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVANQ 190
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|432116895|gb|ELK37482.1| CUGBP Elav-like family member 5 [Myotis davidii]
Length = 426
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 69/91 (75%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 336 EGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASA 395
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR PY
Sbjct: 396 QTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 426
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 11/120 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 57 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 116
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 117 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYA 165
>gi|351711625|gb|EHB14544.1| CUG-BP- and ETR-3-like factor 4 [Heterocephalus glaber]
Length = 702
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG VS+++PASA
Sbjct: 581 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATSQSKCFGLVSFDTPASA 640
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 326
Q AI MNG Q+G K+LKVQLKR N+P
Sbjct: 641 QTAIQAMNGFQIGMKRLKVQLKRPKDANRP 670
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 323 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 382
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 383 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 412
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 226 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 285
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 286 LPGMNRPIQVKPADSE 301
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 221 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 280
>gi|313228868|emb|CBY18019.1| unnamed protein product [Oikopleura dioica]
Length = 398
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 85/140 (60%), Gaps = 12/140 (8%)
Query: 189 GLQYPM-PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIY 247
G Q+ M P P G PL S G S A N NP Q EGP G NLFIY
Sbjct: 270 GYQFVMVPNPAGGYTQVPL--SCGGPSMAALNQNPCAP---------QREGPDGCNLFIY 318
Query: 248 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 307
H+PQEF D +L N F FG V+SAKVF+D+AT SKCFGFVSY++ SA NAI MNG Q
Sbjct: 319 HLPQEFTDADLANIFAPFGAVISAKVFIDRATNQSKCFGFVSYDNAPSAANAITSMNGFQ 378
Query: 308 LGGKKLKVQLKRDNKQNKPY 327
+G K+LKVQLKR +K +
Sbjct: 379 IGMKRLKVQLKRPKAGDKNF 398
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ ILR + +SKGCAF+K + A A+ ++G
Sbjct: 51 MLSKTQTEEDVRRLFGKYGAIEECTILRTPEGSSKGCAFIKLANVQHAQNAIAQMHGSTT 110
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S +VVK AD EKER R+ Q+
Sbjct: 111 MPGASSSIVVKLADNEKERALRKMQQ 136
>gi|269868170|gb|ACZ52391.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ I MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQATIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
>gi|74149188|dbj|BAE22391.1| unnamed protein product [Mus musculus]
Length = 88
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 69/87 (79%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI
Sbjct: 2 GANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI 61
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR +KPY
Sbjct: 62 QSMNGFQIGMKRLKVQLKRSKNDSKPY 88
>gi|344246977|gb|EGW03081.1| CUG-BP- and ETR-3-like factor 3 [Cricetulus griseus]
Length = 447
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 358 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 417
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 418 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|301767880|ref|XP_002919375.1| PREDICTED: CUGBP Elav-like family member 3-like [Ailuropoda
melanoleuca]
Length = 461
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 372 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 431
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 461
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|390338613|ref|XP_003724811.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Strongylocentrotus purpuratus]
Length = 469
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 69/93 (74%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG+V+S+KVFVD+ T SKCFGFVS+++P
Sbjct: 377 QREGPEGCNLFIYHLPQEFGDAELTQMFVPFGQVISSKVFVDRVTNQSKCFGFVSFDNPQ 436
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AQ AI MNG Q+G K+LKVQ KR NKPY
Sbjct: 437 CAQAAIQAMNGFQIGMKRLKVQHKRPKDANKPY 469
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 19 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 78
G + LQ+ ++ GCAF+K+ T+++A+ A+ +IN ++ LVVK+ADTEKE
Sbjct: 117 GMTRALQVKPADSESRGGCAFVKFSTRKEAVGAINSIN-----MSANPNLVVKFADTEKE 171
Query: 79 RQARRAQK 86
RQ RR Q+
Sbjct: 172 RQLRRMQQ 179
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LF+ IP+ +++L F+ FGR+ V D+ TGV K F++Y ES AQ A+
Sbjct: 50 LFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIRAQKAL 109
>gi|380799133|gb|AFE71442.1| CUGBP Elav-like family member 3 isoform 2, partial [Macaca mulatta]
Length = 102
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 12 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 71
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 72 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 102
>gi|426230734|ref|XP_004009417.1| PREDICTED: CUGBP Elav-like family member 5 [Ovis aries]
Length = 579
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 153/331 (46%), Gaps = 68/331 (20%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-----KGCAFLKYETKEQALAALEAI 55
ML K SE +V LF +G I + +LRG ++ GCAF+K+ + +A AA+ A+
Sbjct: 165 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPRRARWGGWGAGCAFVKFSSHTEAQAAIHAL 224
Query: 56 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPP 115
+G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP P
Sbjct: 225 HGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---P 273
Query: 116 YNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP 175
Y+ Y + LMQ + + + + P V +S N P P
Sbjct: 274 YSAY------AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAP 325
Query: 176 PSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAV 217
SG G AVPGL P+ P+PG GH L + G V SP V
Sbjct: 326 ASGLHSPPLLGTAAVPGLVAPITNGFAGVVPFPG---GHPALETVYANGLVPYPAQSPTV 382
Query: 218 ANS-NPSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFG 254
A + +P+ S ++ T + EGP G NLFIYH+PQEFG
Sbjct: 383 AETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFG 442
Query: 255 DQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
D EL F FG ++S+KVF+D+AT SKCF
Sbjct: 443 DTELTQMFLPFGNIISSKVFMDRATNQSKCF 473
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 77 IPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 136
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 137 LPGMARPIQVKPADSE 152
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 205 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNA 261
PL + P V +A +P SSG GGQ +G + LF+ IP+ +++L
Sbjct: 32 PLRSRPFVVL-MLARPSP-VGSSGPEPPGGQPDGTKDLDAIKLFVGQIPRNLDEKDLKPL 89
Query: 262 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRD 320
F+ FGR+ V D TG+ K F++Y + SA A A+ L G +Q+K
Sbjct: 90 FEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPA 149
Query: 321 NKQNK 325
+ +++
Sbjct: 150 DSESR 154
>gi|241626818|ref|XP_002409727.1| RNA binding protein NAPOR-3, putative [Ixodes scapularis]
gi|215503224|gb|EEC12718.1| RNA binding protein NAPOR-3, putative [Ixodes scapularis]
Length = 139
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 69/93 (74%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q + P GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 47 QYQCPEGANLFIYHLPQEFTDSDLAQTFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNSL 106
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 107 SAQAAIQAMNGFQIGTKRLKVQLKRSKDASKPY 139
>gi|442761475|gb|JAA72896.1| Putative rna-binding protein etr-3 rrm superfamily, partial [Ixodes
ricinus]
Length = 129
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 68/90 (75%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 40 GPEGANLFIYHLPQEFTDSDLAQTFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNSLSAQ 99
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 100 AAIQAMNGFQIGTKRLKVQLKRSKDASKPY 129
>gi|328722645|ref|XP_003247623.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Acyrthosiphon pisum]
Length = 437
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 72/96 (75%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
S Q+EGP GANLFIYH+PQ+F D +L F FG V+SAKV++DK T +SKCFGFVSY+
Sbjct: 342 SSKQLEGPEGANLFIYHLPQDFADSDLVTMFLPFGNVISAKVYIDKETKLSKCFGFVSYD 401
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+ SAQ AI MN Q+G K+LKVQLKR + ++PY
Sbjct: 402 NAYSAQAAIQTMNSYQVGNKRLKVQLKRPKEASRPY 437
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +SE ++ +F +G I++ +LR SKGCAF+ Y TK+ A+AA++ ++
Sbjct: 14 MLSKKISEPDIRLMFEPFGAIEECSVLRDPNGVSKGCAFVTYTTKQNAIAAIKGMHHSQT 73
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQS 89
MEG + PLVVK+ADT+KE+ +R Q+ Q+
Sbjct: 74 MEGCTCPLVVKFADTQKEKDQKRMQQMQA 102
>gi|269868168|gb|ACZ52390.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQE GD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQELGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
>gi|269868166|gb|ACZ52389.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KV +D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVLIDRATNQSKCFGFVSFDN 301
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
>gi|71980775|ref|NP_492958.3| Protein UNC-75 [Caenorhabditis elegans]
gi|33469616|gb|AAQ19851.1| putative RNA-binding protein [Caenorhabditis elegans]
gi|38422759|emb|CAB03896.4| Protein UNC-75 [Caenorhabditis elegans]
Length = 514
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
++ GP G NLFIYH+PQEFGD EL F FG ++SAKVFVD+AT SKCFGFVSY++
Sbjct: 422 EVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIH 481
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+Q AI MNG Q+G K+LKVQLKR +++PY
Sbjct: 482 SSQAAITAMNGFQIGMKRLKVQLKRPRNESRPY 514
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 61/90 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE EV ALF+ +G + ++ +LRG+ SKGCAF+KY+ A A+ A++G
Sbjct: 130 MLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQT 189
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 190 MPGASSSLVVKYADTEKERQNRRMQQMAAQ 219
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
++S+S +G ++ P LF+ IP+ +++L + F+ FG++ + DK TG+
Sbjct: 10 ASSTSSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMH 69
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 326
K F++Y SA A ++ + L G +Q+K + ++P
Sbjct: 70 KGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTDSRP 114
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I + IL+ KGCAFL Y ++ A+ ++ +
Sbjct: 36 IPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKT 95
Query: 61 MEGSSVPLVVKWADTE 76
+ G + + VK ADT+
Sbjct: 96 LPGMNRAMQVKPADTD 111
>gi|308465068|ref|XP_003094796.1| CRE-UNC-75 protein [Caenorhabditis remanei]
gi|308246879|gb|EFO90831.1| CRE-UNC-75 protein [Caenorhabditis remanei]
Length = 491
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
++ GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVSY++
Sbjct: 399 EVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHVVSAKVFVDRATNQSKCFGFVSYDNIH 458
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+Q AIA MNG Q+G K+LKVQLKR + +PY
Sbjct: 459 SSQAAIAAMNGFQIGMKRLKVQLKRPRESARPY 491
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF+ +G + ++ +LRG+ SKGCAF+KY++ A A+ A++G
Sbjct: 130 MLSKQQSEDDVRTLFAAFGELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQT 189
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ +Q L
Sbjct: 190 MPGASSSLVVKYADTEKERQNRRMQQMAAQMGML 223
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
++S+S +G ++ P LF+ IP+ +++L + F+ FG++ + DK TG+
Sbjct: 10 ASSTSSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMH 69
Query: 283 KCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 326
K F+++ SAQ ++ + L G +Q+K + ++P
Sbjct: 70 KGCAFLTFCHRDSAQRCQTTLHDQKTLPGMNRAMQVKPADTDSRP 114
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I + IL+ KGCAFL + ++ A ++ +
Sbjct: 36 IPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTFCHRDSAQRCQTTLHDQKT 95
Query: 61 MEGSSVPLVVKWADTE 76
+ G + + VK ADT+
Sbjct: 96 LPGMNRAMQVKPADTD 111
>gi|269868174|gb|ACZ52393.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQE GD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQELGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
>gi|332255740|ref|XP_003276989.1| PREDICTED: CUGBP Elav-like family member 5 [Nomascus leucogenys]
Length = 438
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 69/91 (75%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 348 EGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASA 407
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR PY
Sbjct: 408 QAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 438
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 104 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 163
Query: 61 M 61
M
Sbjct: 164 M 164
>gi|345485141|ref|XP_001605146.2| PREDICTED: CUGBP Elav-like family member 2 [Nasonia vitripennis]
Length = 733
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
QIEGP G NLFIYH+P + D +L F FG VLSAKVF+DK T SKCFGFVSY+ P+
Sbjct: 642 QIEGPEGCNLFIYHLPHTYTDTDLIAMFMPFGNVLSAKVFIDKETKKSKCFGFVSYDKPS 701
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MM+G Q+G K+LKVQLK+ +K KPY
Sbjct: 702 SAQKAIQMMHGFQIGTKRLKVQLKK-SKDAKPY 733
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +YG I++ +LR + Q SKGCAF+ + +K+ A+ A++A++
Sbjct: 296 MLSKKFTENDVRNMFDVYGEIEECSVLRENGQ-SKGCAFVTFASKQSAVLAIKALHHSQT 354
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+K++ +R Q+ Q+ N+
Sbjct: 355 MEGCSSPLVVKFADTQKDKDQKRLQQMQANLWNI 388
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 198 GGMLGHRP--LNNSPGSVSPAVANSNPSTSSSGGT-GSGGQIEGPPGANL--FIYHIPQE 252
G + H P N P SP+ S + T + +E P N+ F+ +P++
Sbjct: 152 GKSISHHPHPYNKKPAQTSPSAPQSTTNGDQKENTIMNNNSVEKPDPDNIKMFVGQVPKD 211
Query: 253 FGDQELGNAFQAFGRVLSAKVFVDKATGVSK-CFGFVSY 290
+ +L F+ FGRV V DK TG SK C + Y
Sbjct: 212 LDENDLRTIFEEFGRVHQINVLRDKYTGSSKGCCAAMDY 250
>gi|338726567|ref|XP_001916316.2| PREDICTED: CUGBP Elav-like family member 5-like [Equus caballus]
Length = 505
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 95/158 (60%), Gaps = 25/158 (15%)
Query: 186 AVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSGG 229
AVPGL P+ P+PGG H L + G V SP VA + +P+ S
Sbjct: 357 AVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLHPAFSGVQ- 412
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
Q GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS
Sbjct: 413 -----QYTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVS 467
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 468 FDNPASAQTAIQAMNGFQVGMKRLKVQLKRPKDPGHPY 505
>gi|324501916|gb|ADY40847.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 501
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G+ ++ GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGF+SY
Sbjct: 407 GTQKEVLGPEGCNLFIYHLPQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFISY 466
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++ ASA AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 467 DNSASAMAAIQAMNGFQIGMKRLKVQLKR--PRDKPY 501
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V ALF+ +G I ++ +LRG+ SKGCAF+K+ QA A+ A++G
Sbjct: 133 MLSKQQNEDDVRALFAPFGAIDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQT 192
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 193 MPGASSSLVVKFADTEKERQLRRMQQMAAQ 222
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I + IL+ KGCAFL Y ++ AL A++ +
Sbjct: 40 IPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRCQAALHDQKT 99
Query: 61 MEGSSVPLVVKWADTE 76
+ G + + VK AD+E
Sbjct: 100 LPGMNRAMQVKPADSE 115
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 226 SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+S +G ++ LF+ IP+ +++L + F++FG++ + DK TG+ K
Sbjct: 17 ASSTDSNGFPVKDSDAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGC 76
Query: 286 GFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 326
F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 77 AFLTYCHRDSALRCQAALHDQKTLPGMNRAMQVKPADSESRP 118
>gi|432114336|gb|ELK36264.1| CUGBP Elav-like family member 3 [Myotis davidii]
Length = 435
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 346 GPDGCNIFIYHLPQEFTDSEILQMFIPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 405
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 406 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 435
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 180 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 239
Query: 61 M 61
+
Sbjct: 240 L 240
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|256078401|ref|XP_002575484.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350645920|emb|CCD59385.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 479
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++P SAQ
Sbjct: 390 PEGCNLFIYHLPQEFGDPELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNPTSAQT 449
Query: 299 AIAMMNGCQLGGKKLKVQLKR-DNKQNKPY 327
AI MNG Q+G K+LKVQLKR N KPY
Sbjct: 450 AIHAMNGFQIGMKRLKVQLKRPKNDSTKPY 479
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF +GTI++ ILR SKGCAF+K+ T+++A +A+ ++G
Sbjct: 25 MLSKQQNEEDVRLLFEPFGTIEECTILRDQNGNSKGCAFVKFSTQQEAQSAILTLHGSQT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S +VVK+AD+EKER R+ Q+
Sbjct: 85 MPGASSSIVVKFADSEKERHTRKIQQ 110
>gi|269868180|gb|ACZ52396.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT S CFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSICFGFVSFDN 346
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
>gi|324505949|gb|ADY42547.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 476
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G+ ++ GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGF+SY
Sbjct: 382 GTQKEVLGPEGCNLFIYHLPQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFISY 441
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
++ ASA AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 442 DNSASAMAAIQAMNGFQIGMKRLKVQLKR--PRDKPY 476
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V ALF+ +G I ++ +LRG+ SKGCAF+K+ QA A+ A++G
Sbjct: 133 MLSKQQNEDDVRALFAPFGAIDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQT 192
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 193 MPGASSSLVVKFADTEKERQLRRMQQMAAQ 222
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I + IL+ KGCAFL Y ++ AL A++ +
Sbjct: 40 IPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRCQAALHDQKT 99
Query: 61 MEGSSVPLVVKWADTE 76
+ G + + VK AD+E
Sbjct: 100 LPGMNRAMQVKPADSE 115
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 226 SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
+S +G ++ LF+ IP+ +++L + F++FG++ + DK TG+ K
Sbjct: 17 ASSTDSNGFPVKDSDAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGC 76
Query: 286 GFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 326
F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 77 AFLTYCHRDSALRCQAALHDQKTLPGMNRAMQVKPADSESRP 118
>gi|339252334|ref|XP_003371390.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316968369|gb|EFV52650.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 427
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 69/93 (74%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVS+++
Sbjct: 335 QKEGPDGCNLFIYHLPQEFGDAELMQMFMPFGPVISAKVFIDRATNQSKCFGFVSFDNAV 394
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR KPY
Sbjct: 395 SAQAAIHAMNGFQIGMKRLKVQLKRPKDVGKPY 427
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E ++ L +G +++ +LRG TSKGCAF+K+ +A AA+ A++G
Sbjct: 25 MLSKQQTEDDLRHLMEPHGHVEECTVLRGPDGTSKGCAFVKFSCHLEAQAAIAALHGSQT 84
Query: 61 M-------EGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M +G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 85 MPVSWFECKGASSSLVVKFADTEKERQLRRMQQMAAQ 121
>gi|358333422|dbj|GAA51938.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 849
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
+ GP G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++ S
Sbjct: 709 LTGPEGCNLFIYHLPQEFGDNELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNQTS 768
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKR 319
AQNAI MNG Q+G K+LKVQLKR
Sbjct: 769 AQNAIQAMNGFQIGLKRLKVQLKR 792
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E E+ LF+ YG+I++ +LR SKGCAF+K+ + +AL+A+E ++
Sbjct: 114 MLGKQQTEDELRTLFAPYGSIEECTVLRDQNGASKGCAFVKFTSNSEALSAIEGLHNSQT 173
Query: 61 MEGSSVPLVVKWADTEKE 78
M+G+S PLVVK+ADT++E
Sbjct: 174 MQGASSPLVVKFADTDRE 191
>gi|47200683|emb|CAF87626.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G N+FIYH+PQEF D EL F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 81 GPEGCNIFIYHLPQEFSDSELLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQ 140
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 141 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 170
>gi|351705590|gb|EHB08509.1| CUG-BP- and ETR-3-like factor 5 [Heterocephalus glaber]
Length = 106
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 71/100 (71%)
Query: 228 GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 287
GG G GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGF
Sbjct: 7 GGIGGRVVFRGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGF 66
Query: 288 VSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
VS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 67 VSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDLGHPY 106
>gi|209878013|ref|XP_002140448.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556054|gb|EEA06099.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 546
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 161/352 (45%), Gaps = 63/352 (17%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
LPKN++E E+S +FS YG I ++ I+R +GCAF+KY KEQ L A+ +++G
Sbjct: 217 LPKNITEEEISDVFSPYGQINEIFIMREIHTGFCRGCAFVKYAFKEQGLYAIASLHGAAT 276
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ + PL V++A S ANNL H S M + PP
Sbjct: 277 LGDVNRPLEVRFA------------SRSSNANNLFLTHGLHHS-----AMAHNPP----- 314
Query: 121 YQASGS-YGLMQYRLP-PMQNQPGFHGIIPPV------NQGNAMR--------GASPDLS 164
SGS Y + R P + N + P V ++G+ R G S +
Sbjct: 315 ---SGSAYHIFNNRKPCHIVNDASYLSANPTVVGNILSHRGSCSRNITLFDHNGISVAAT 371
Query: 165 SNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG-----------HRPLNN-SPGS 212
+NM PR+ P SG + A MP GM H ++ +
Sbjct: 372 TNMYPRSRGHPLSGSPSNSTAAAAITANLMPRCIGMWKEYFTSDGKPYYHNEISRVTQWE 431
Query: 213 VSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAK 272
V P N P S Q+ GPPGAN+FI+++P E+ + L + F FG +LSA
Sbjct: 432 VPPEFMNFRPVFSR--------QVVGPPGANIFIFNVPYEWEKKSLIHHFCRFGHILSAH 483
Query: 273 VFVDKATGVSKCFGFVSYESPASAQNAIAMMNG-CQLGGKKLKVQLKRDNKQ 323
+ +DK +G +K FVSY+ SA +A+ MNG G+KLKV +K+ +Q
Sbjct: 484 LMIDKNSGRNKGVAFVSYDHVHSAADAVNNMNGFVTESGRKLKVSIKQGQEQ 535
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E E+ LF +YG + ++ I+R +G A + E+ QA A+ +N
Sbjct: 117 IPRNIEEDELKKLFELYGNVVNISIVREKNTGIHRGAALVTMESIAQADYAIRELNLIKV 176
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 109
++ PL V+++ E ER A+ +P D Q GALP
Sbjct: 177 LDNLRGPLKVQYSTGEAERFGFEAESC------IPGVD-QVKLFVGALP 218
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF+ IP+ + EL F+ +G V++ + +K TG+ + V+ ES A A AI +
Sbjct: 112 LFVGRIPRNIEEDELKKLFELYGNVVNISIVREKNTGIHRGAALVTMESIAQADYAIREL 171
Query: 304 N 304
N
Sbjct: 172 N 172
>gi|281500590|pdb|2KHC|A Chain A, Bruno Rrm3+
Length = 118
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 69/87 (79%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++
Sbjct: 32 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDN 91
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKR 319
P SAQ AI MNG Q+G K+LKVQLK+
Sbjct: 92 PDSAQVAIKAMNGFQVGTKRLKVQLKK 118
>gi|358340719|dbj|GAA48557.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 675
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
+ GP G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++P S
Sbjct: 583 LTGPEGCNLFIYHLPQEFGDPELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNPTS 642
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKR-DNKQNKPY 327
A AI MNG Q+G K+LKVQLKR + KPY
Sbjct: 643 AHAAIQAMNGFQIGMKRLKVQLKRPKSDATKPY 675
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +GTI++ ILR SKGCAF+K+ ++++A +A+ A++G
Sbjct: 177 MLSKQQGEEDVRRLFEPFGTIEECTILRDQSGNSKGCAFVKFSSQQEAQSAILALHGSQT 236
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S +VVK+AD+EKER R+ Q+
Sbjct: 237 MPGASSSIVVKFADSEKERHTRKIQQ 262
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF+ + ++ G++++ F+ FG + + D+ +G SK FV + S AQ+AI +
Sbjct: 173 LFVGMLSKQQGEEDVRRLFEPFGTIEECTILRDQ-SGNSKGCAFVKFSSQQEAQSAILAL 231
Query: 304 NGCQ 307
+G Q
Sbjct: 232 HGSQ 235
>gi|269868148|gb|ACZ52380.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 71/95 (74%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KV +D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVSIDRATNQSKCFGFVSFDN 346
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
>gi|312076960|ref|XP_003141093.1| LYST-interacting protein LIP9 [Loa loa]
Length = 473
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
+ GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVSY++ AS
Sbjct: 384 VLGPEGCNLFIYHLPQEFGDTELMQMFMPFGHVISAKVFIDRATNQSKCFGFVSYDNTAS 443
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
A AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 444 AMAAIQAMNGFQIGMKRLKVQLKR--PRDKPY 473
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V ALF+ +G I ++ +LRG+ SKGCAF+K+ T QA A+ A++G
Sbjct: 31 MLSKQHNEDDVRALFAPFGVIDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQT 90
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 91 MPGASSSLVVKFADTEKERQLRRMQQMAAQ 120
>gi|269868309|gb|ACZ52459.1| Bruno-3 transcript variant 16 [Drosophila persimilis]
Length = 367
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 70/95 (73%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEF D EL F FG V+ +KVF+D+AT SKCFGFVS+++
Sbjct: 273 GCSISGPEGCNLFIYHLPQEFCDAELMQMFLPFGNVIGSKVFIDRATNQSKCFGFVSFDN 332
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 333 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 367
>gi|320167253|gb|EFW44152.1| RNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 461
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 68/82 (82%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP GANLFIYH+P EFGD EL NAF +G V+SAKV+VDKAT SKCFGFVS+++PA+AQ
Sbjct: 371 GPEGANLFIYHLPNEFGDVELANAFMTYGTVISAKVYVDKATNQSKCFGFVSFDNPAAAQ 430
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
AI M+G Q+G K+LKVQLKR
Sbjct: 431 AAIQSMDGYQIGNKRLKVQLKR 452
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ +F +G + +L IL+ KGCAFL Y ++E A A+ A++G
Sbjct: 56 VPRTMEEKDLRPVFEEFGPVVELTILKDRFNGLHKGCAFLTYASRESAQLAMAALHGVRV 115
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
++G + PL VK AD E++ +AR+
Sbjct: 116 LQGMAHPLQVKPADREEKAEARK 138
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 225 SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 284
S++ G+G G ++ LF+ +P+ +++L F+ FG V+ + D+ G+ K
Sbjct: 38 SAASGSGGGEHVK------LFVGQVPRTMEEKDLRPVFEEFGPVVELTILKDRFNGLHKG 91
Query: 285 FGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNK 325
F++Y S SAQ A+A ++G + L G +Q+K +++ K
Sbjct: 92 CAFLTYASRESAQLAMAALHGVRVLQGMAHPLQVKPADREEK 133
>gi|399217298|emb|CCF73985.1| unnamed protein product [Babesia microti strain RI]
Length = 432
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 161/336 (47%), Gaps = 72/336 (21%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK ++E ++ +F YG ++++ I++ S SKGCAF+K KEQ L A++ +GK
Sbjct: 136 VPKTITEEQIKKVFGEYGQVEEVFIMKDLSTGLSKGCAFVKMSYKEQGLYAIKMADGKLT 195
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY---- 116
++ S PL V++A+ + ++Q N +P + + GA+ + P
Sbjct: 196 IDNSK-PLEVRFAEAKGKQQ-----------NAIPGVPIPNIGV-GAMARPFQPGVPRQI 242
Query: 117 ---------NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNM 167
+G Y S GL Q+ +PP + Q G P++ NAM
Sbjct: 243 GVWREYISPDGRPYYFSEQTGLTQWEVPP-EFQMG------PISTVNAM----------- 284
Query: 168 GPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSS 227
+ MPPS P+ ++ +NN ++ A+ N P+ +
Sbjct: 285 --GMHMMPPS----------------TPFDQTVMH---MNN----ITNALYNKQPNATPC 319
Query: 228 GGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 287
G G G GPPGANLFI+HIP ++ +L F FG ++SA++ DK TG ++ F F
Sbjct: 320 GSNGVGQF--GPPGANLFIFHIPYDWYYADLVKTFSQFGTIVSARIATDKGTGRNRGFAF 377
Query: 288 VSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
VSY + SA AI MNG + KKLKV +K+ +Q
Sbjct: 378 VSYSTVESAVKAITCMNGFIIANKKLKVTVKKGEEQ 413
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LF+ +P+ + D +L F FG+V + DK T K FV S A A +
Sbjct: 26 PLSIKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADADS 85
Query: 299 AIAMMNGCQL 308
A+ ++ ++
Sbjct: 86 AVRALHNIKV 95
>gi|391325662|ref|XP_003737349.1| PREDICTED: uncharacterized protein LOC100908759 [Metaseiulus
occidentalis]
Length = 373
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 67/87 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QIEGP G+NLFIYH+PQ+FGD ++ F FG V+SAKVF+DK T +SKCFGFVSY +
Sbjct: 275 GKQIEGPEGSNLFIYHLPQDFGDNDMVQLFMPFGEVISAKVFIDKHTQLSKCFGFVSYSN 334
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKR 319
AQ AI +NG Q+G K+LKVQLKR
Sbjct: 335 AIHAQAAIKALNGFQIGTKRLKVQLKR 361
>gi|269868247|gb|ACZ52428.1| Bruno-3 transcript variant 17 [Drosophila melanogaster]
Length = 335
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 82/134 (61%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 212 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 261
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT +SKCFGFVS+++PASAQ AI
Sbjct: 262 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNLSKCFGFVSFDNPASAQAAIQA 321
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 322 MNGFQIGMKRLKVQ 335
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G + G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTIPGASSSLVVKYADTEKERQI 65
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
>gi|340369729|ref|XP_003383400.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Amphimedon
queenslandica]
Length = 447
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 69/93 (74%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+P + D +L N F FG+V+SAKVF+DK T +SKCFGFVS+E+
Sbjct: 354 QREGPEGGNLFIYHLPNDIKDSDLANMFSQFGKVISAKVFLDKHTNLSKCFGFVSFETSQ 413
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+ Q AI MNG Q+G K+LKVQLKR + NKPY
Sbjct: 414 AGQAAIQAMNGFQIGTKRLKVQLKRPKEANKPY 446
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PK E ++ AL +G I ++ I++ ++ SKGCAF+ Y KE A+ A + ++ K +
Sbjct: 24 IPKEYDEEQIKALLEEFGPIHEINIIKDKEKRSKGCAFVTYCLKESAVNAQQNLHEKRTL 83
Query: 62 EGSSVPLVVKWA 73
+ P+ VK A
Sbjct: 84 PAMNHPMQVKPA 95
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 302
LF+ + E D+++ N F FG V + DK GVSK FV S A AI +
Sbjct: 108 LFVGQLSPEMSDEQVANLFSPFGLVEDVSILRDK-DGVSKKAAFVRMGSRNEAMTAIQGL 166
Query: 303 MNGCQLGGKKLKVQLK 318
C L G V +K
Sbjct: 167 HQSCTLPGVSHPVNVK 182
>gi|390338611|ref|XP_781047.3| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 520
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 67/90 (74%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G NLFIYH+PQEFGD EL F FG+V+S+KVFVD+ T SKCFGFVS+++P AQ
Sbjct: 431 GPEGCNLFIYHLPQEFGDAELTQMFVPFGQVISSKVFVDRVTNQSKCFGFVSFDNPQCAQ 490
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQ KR NKPY
Sbjct: 491 AAIQAMNGFQIGMKRLKVQHKRPKDANKPY 520
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E EV A+F+ +G I + IL+ S+GCAF+K+ T+++A+ A+ +IN
Sbjct: 142 MLNKAQTEEEVRAMFTHFGKIDECTILKDPNGISRGCAFVKFSTRKEAVGAINSIN---- 197
Query: 61 MEGSSVP-LVVKWADTEKERQARRAQK 86
S+ P LVVK+ADTEKERQ RR Q+
Sbjct: 198 --MSANPNLVVKFADTEKERQLRRMQQ 222
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +LR KGCAFL Y +E A+ A +A++ +
Sbjct: 55 IPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIRAQKALHEQKT 114
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + L VK AD+E + R+
Sbjct: 115 LPGMTRALQVKPADSESRGEDRK 137
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LF+ IP+ +++L F+ FGR+ V D+ TGV K F++Y ES AQ A+
Sbjct: 50 LFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIRAQKAL 109
>gi|350417598|ref|XP_003491500.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
2-like [Bombus impatiens]
Length = 635
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
T + QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 538 TSTDKQIEGPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVS 597
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++ ASAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 598 YDNAASAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 635
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 64/94 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V +FSIYGTI++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 202 MLSKKFSENDVRNMFSIYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 261
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 262 MEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 295
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+P ++ E ++ LF +G + + ILR S +GC F+ + T++ AL A A++
Sbjct: 116 VPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDAQNALHNVKT 175
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
G P+ +K AD+E + +
Sbjct: 176 FSGMRHPIQMKPADSENRNERK 197
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 106 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 165
Query: 299 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N G + +Q+K + +N+
Sbjct: 166 AQNALHNVKTFSGMRHPIQMKPADSENR 193
>gi|47224440|emb|CAG08690.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 75/122 (61%), Gaps = 26/122 (21%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF------ 285
+G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCF
Sbjct: 394 AGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGECVLC 453
Query: 286 --------------------GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +K
Sbjct: 454 SASAPQRSLLRRLKRLSCSSGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSK 513
Query: 326 PY 327
PY
Sbjct: 514 PY 515
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K E E+ +FS +G I++ ++LRG S+GCAF+ + T+ A A++ ++
Sbjct: 116 MVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQT 175
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S PLVVK ADT+++++
Sbjct: 176 MEGCSSPLVVKLADTQRDKE 195
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF +G + + ILR SKGC F+ + T++ AL A A++
Sbjct: 25 IPRSWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNI 84
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 85 KTLSGMHHPIQMKPADSEK 103
>gi|426253953|ref|XP_004020653.1| PREDICTED: CUGBP Elav-like family member 4 [Ovis aries]
Length = 513
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 67/87 (77%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NLFIYH+PQE GD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASAQ AI
Sbjct: 427 GCNLFIYHLPQELGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAI 486
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR N+PY
Sbjct: 487 QAMNGFQIGMKRLKVQLKRPKDANRPY 513
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 37 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
CAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 147 CAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 200
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF---VSYESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F F S +S A+
Sbjct: 52 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGFAFKTNCSTDSAFKVGRAV 111
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNK 325
M +L G +Q+K + +++
Sbjct: 112 HKMK--ELPGMNRPIQVKPADSESR 134
>gi|294464552|gb|ADE77786.1| unknown [Picea sitchensis]
Length = 101
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
Query: 194 MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF 253
M Y G M+G L GSV PA+ N+N S + + T SG Q+EGPPGANLFIYHIPQEF
Sbjct: 1 MGYQGAMMGPAALPVGHGSVGPAMVNAN-SAAGNVKTSSGAQVEGPPGANLFIYHIPQEF 59
Query: 254 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
GDQEL NAF +FG+V+SAKVFVDKATGVSKCFG
Sbjct: 60 GDQELSNAFSSFGKVISAKVFVDKATGVSKCFG 92
>gi|196475703|gb|ACG76412.1| trinucleotide repeat containing 4 (predicted) [Otolemur garnettii]
Length = 564
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 67/87 (77%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI
Sbjct: 478 GCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAI 537
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR N+PY
Sbjct: 538 QAMNGFQIGMKRLKVQLKRPKDANRPY 564
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKG LK+ + +++ +++ H+
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGLPLLKHMPLQPSIS--PSLSVCHQ 158
Query: 61 ME-GSSVPLVVKWADTEKERQARRAQKAQSQ 90
E G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 159 EERGASSSLVVKFADTEKERGLRRMQQVATQ 189
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|298710157|emb|CBJ31867.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 400
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 165/353 (46%), Gaps = 57/353 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M PK+ E + A+F +GT D+ ++R SKGCAF++YE+ + A A+EA++ KH
Sbjct: 65 MAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHI 124
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G LVV AD + Q ++ + + + D LF AL + P + G
Sbjct: 125 MPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDG----LFRAL----SRPSSFMG 176
Query: 121 YQASG-----SYG--LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA 173
+ G S G + Q R Q G P V G+ G S L S M Y
Sbjct: 177 SDSGGGGTIPSLGNVVGQNRSTVTAPQAGATAFAPTVAPGS---GPSSGLLSGM---PYF 230
Query: 174 M----PPSGFVGSGYPAVPG--LQYPM---PYPGGMLGHRPLNNSPGSVSPAVANSNPST 224
+ PP G YP VP +Q+ P G +G +P +++ SPAV N++
Sbjct: 231 LCGGNPPQGTY-VYYPYVPSSSVQHDTGSSAAPAG-IGAKP-HHAFSVGSPAVGNNDRCE 287
Query: 225 SSSGGT--------------GSGG----------QIEGPPGANLFIYHIPQEFGDQELGN 260
+ G G+GG Q GP GANLF+Y++P D +L
Sbjct: 288 LGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLAT 347
Query: 261 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 313
AF FG VLSAKV+ D+ TG SK FGFVSY P A+ AI+ MNG +G K L
Sbjct: 348 AFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKFL 400
>gi|313247153|emb|CBY35974.1| unnamed protein product [Oikopleura dioica]
Length = 414
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 85/147 (57%), Gaps = 10/147 (6%)
Query: 189 GLQYPM-PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIE-------GPP 240
G Q+ M P P G PL S G S A N NP G + GP
Sbjct: 270 GYQFVMVPNPAGGYTQVPL--SCGGPSMAALNQNPCAPQREGNFHSLVLHNFNKLLPGPD 327
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NLFIYH+PQEF D +L N F FG V+SAKVF+D+AT SKCFGFVSY++ SA NAI
Sbjct: 328 GCNLFIYHLPQEFTDADLANIFAPFGAVISAKVFIDRATNQSKCFGFVSYDNAPSAANAI 387
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG Q+G K+LKVQLKR +K +
Sbjct: 388 TSMNGFQIGMKRLKVQLKRPKAGDKNF 414
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ ILR + +SKGCAF+K + A A+ ++G
Sbjct: 51 MLSKTQTEEDVRRLFGKYGAIEECTILRTPEGSSKGCAFIKLANVQHAQNAIAQMHGSTT 110
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S +VVK AD EKER R+ Q+
Sbjct: 111 MPGASSSIVVKLADNEKERALRKMQQ 136
>gi|269868222|gb|ACZ52417.1| Bruno-3 transcript variant 17, partial [Drosophila pseudoobscura]
Length = 351
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 81/134 (60%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 337
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 338 MNGFQIGMKRLKVQ 351
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|351714059|gb|EHB16978.1| CUG-BP- and ETR-3-like factor 5 [Heterocephalus glaber]
Length = 224
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 68/90 (75%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 135 GPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQ 194
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
I MNG Q+G K+LKVQLKR + PY
Sbjct: 195 TGIQAMNGFQIGMKRLKVQLKRPKELGHPY 224
>gi|195427147|ref|XP_002061640.1| GK17101 [Drosophila willistoni]
gi|194157725|gb|EDW72626.1| GK17101 [Drosophila willistoni]
Length = 645
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 89/162 (54%), Gaps = 21/162 (12%)
Query: 169 PRNYAMPPSGFVGS----------GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVA 218
P + +PP G G P PG+ +P Y P ++ P +A
Sbjct: 299 PLHLTIPPQGLANGDAAALQHAFPGLPPFPGVAFPAVY----------GQFPQALPPPLA 348
Query: 219 NSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 278
P+ G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+A
Sbjct: 349 AVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRA 408
Query: 279 TGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
T SKCFGFVS+++PASAQ AI MNG Q+G K+LK LKR+
Sbjct: 409 TNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKF-LKRN 449
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 95 MLSKQQTEDDVRQIFQPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 154
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 155 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 188
>gi|340502339|gb|EGR29040.1| RNA binding protein, putative [Ichthyophthirius multifiliis]
Length = 316
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 142/319 (44%), Gaps = 67/319 (21%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LPK +E + +F +G I++L +++ SQ ++ AFLKY+ KE+A A+ +N + +
Sbjct: 50 LPKTCTEQNIRDIFETFGEIEELHLMKDSQNNTRQ-AFLKYKLKEKAHLAIRNLNSQVYI 108
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 121
S P+ V++A E + ++ Q QAN +P
Sbjct: 109 GNSENPIEVRFAKKYVESEHQKVQHKTEQAN---------------IPFV---------- 143
Query: 122 QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 181
S+ + ++ NQP ++ P NQ R ++ L ++
Sbjct: 144 ----SWQKIYFKYYTENNQPYYYH--PYTNQSTYERPSTGSLIHDVDG-----------S 186
Query: 182 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 241
S Y + Q MP P V N G+ GPPG
Sbjct: 187 SEYIELNSKQLLMP----------------KNEPFVINDRKDVYD-------GKKHGPPG 223
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
+NLFI+H+P +F D +L F FG V+SA+V + G SK FGF+SY S A++AI
Sbjct: 224 SNLFIFHLPTDFRDSDLERMFSQFGEVISARVNT-RPDGTSKGFGFISYNSAKEAEDAIR 282
Query: 302 MMNGCQLGGKKLKVQLKRD 320
+NG QL K+LKV++K++
Sbjct: 283 NLNGVQLKNKRLKVEIKKE 301
>gi|269868218|gb|ACZ52415.1| Bruno-3 transcript variant 1, partial [Drosophila pseudoobscura]
Length = 415
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 81/134 (60%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 292 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 341
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ A+
Sbjct: 342 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAVQA 401
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 402 MNGFQIGMKRLKVQ 415
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 19/113 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 106
Query: 61 ME-------------------GSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPVCTTNLHSSKDINPLPYSGGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 159
>gi|340718155|ref|XP_003397537.1| PREDICTED: CUGBP Elav-like family member 2-like [Bombus terrestris]
Length = 627
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ A
Sbjct: 535 QIEGPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNAA 594
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 595 SAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 627
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 64/94 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V +FSIYGTI++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 201 MLSKKFSENDVRNMFSIYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 260
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 261 MEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 294
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+P ++ E ++ LF +G + + ILR S +GC F+ + T++ AL A A++
Sbjct: 115 VPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDAQNALHNVKT 174
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
G P+ +K AD+E + +
Sbjct: 175 FSGMRHPIQMKPADSENRNERK 196
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 105 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 164
Query: 299 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N G + +Q+K + +N+
Sbjct: 165 AQNALHNVKTFSGMRHPIQMKPADSENR 192
>gi|383860257|ref|XP_003705607.1| PREDICTED: CUGBP Elav-like family member 2-like [Megachile
rotundata]
Length = 443
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
QIEGP G NLFIYH+PQ+F D +L F FG V+SAKVF+DK T +SKCFGFVSY++ A
Sbjct: 351 QIEGPEGCNLFIYHLPQQFSDTDLVTTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNAA 410
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 411 SAQAAIQAMNGFQIGMKRLKVQLKRSKDASKPY 443
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 64/94 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +FS+YGTI++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 17 MLSKKFTENDVRNMFSVYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 76
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 77 MEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 110
>gi|47212399|emb|CAF96701.1| unnamed protein product [Tetraodon nigroviridis]
Length = 795
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 66/84 (78%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
+G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY
Sbjct: 633 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSY 692
Query: 291 ESPASAQNAIAMMNGCQLGGKKLK 314
++P SAQ AI MNG Q+G K+LK
Sbjct: 693 DNPVSAQAAIQAMNGFQIGMKRLK 716
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 182 MVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 241
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ + SL G G P Y
Sbjct: 242 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALL 299
Query: 121 YQASGSYGL 129
QA+ S L
Sbjct: 300 QQAASSGNL 308
>gi|449668124|ref|XP_002167931.2| PREDICTED: CUGBP Elav-like family member 2-like [Hydra
magnipapillata]
Length = 511
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 418 QKEGPDGANLFIYHLPQEFTDADLMQTFMPFGNVVSAKVFIDKPTLLSKCFGFVSYDNSL 477
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SA NAI M+G +G K+LKVQLKR K KPY
Sbjct: 478 SATNAINAMHGFSIGSKRLKVQLKRP-KDKKPY 509
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E ++ +FS YGTI++L ILR SKGCAF+KY T+ QA A++A++
Sbjct: 115 MLSKKLNEDDLRIMFSPYGTIEELTILRNPDGGSKGCAFIKYSTRLQAQNAIKAMHNSQT 174
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
ME S P+VVK ADTE+E+ +R QS A NL
Sbjct: 175 MENCSSPVVVKIADTEREKIQKR---MQSMATNL 205
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N +E E+ + YG I +L IL KGCAFL + KE A ++ K
Sbjct: 28 VPRNWTEKELRPILEPYGEIHELSILYDKYTGQHKGCAFLVFYEKEAANRCQNELHEKRT 87
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ GS + VK A++E + + R+
Sbjct: 88 LPGSVNKMQVKPAESEIKTEDRK 110
>gi|269868267|gb|ACZ52438.1| Bruno-3 transcript variant 4 [Drosophila virilis]
gi|269868269|gb|ACZ52439.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 256 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 305
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 306 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 365
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 366 MNGFQIGMKRLKVQ 379
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 30 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 89
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 90 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
>gi|269868271|gb|ACZ52440.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 256 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 305
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PA AQ AI
Sbjct: 306 NLFIYHLPQEFGDAELMQVFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPAGAQAAIQA 365
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 366 MNGFQIGMKRLKVQ 379
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 30 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 89
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 90 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
>gi|269868225|gb|ACZ52418.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 351
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 81/134 (60%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 277
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA+ AI
Sbjct: 278 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASARAAIQA 337
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 338 MNGFQIGMKRLKVQ 351
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
>gi|269868265|gb|ACZ52437.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 256 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPVGC 305
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 306 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 365
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 366 MNGFQIGMKRLKVQ 379
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 30 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 89
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 90 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
>gi|269868285|gb|ACZ52447.1| Bruno-3 transcript variant 17 [Drosophila virilis]
Length = 334
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 211 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 260
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 261 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 320
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 321 MNGFQIGMKRLKVQ 334
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
>gi|410921168|ref|XP_003974055.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 4 [Takifugu
rubripes]
Length = 471
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 153/334 (45%), Gaps = 41/334 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G
Sbjct: 172 MLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQT 231
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q FG A P++ Y
Sbjct: 232 MPGASSSLVVKFADTDKERTIRRMQQMVGQ--------------FGIFNPAIALPFSTY- 276
Query: 121 YQASGSYGLMQYRLPPMQNQPGFH---GIIPPVNQGNAMRGASPDL--SSNMGPRNYAMP 175
+S ++ LMQ + M G + + P Q + M + + + M P + P
Sbjct: 277 --SSYAHALMQQQAAIMAASHGGYLTPSVAFPATQIHQMGALNINSLPPTPMTPVSGDSP 334
Query: 176 PSGFVGSGYPAVPGLQYPMPYPGGMLG--HRPLNNSPGSVSPAVANSNPSTSSSGGTGSG 233
P+ S P++ P G G H+P N P +V N P S+ T +
Sbjct: 335 PANITTSAVPSI-----VTPIVNGFTGIPHQP-NGHP-AVETMYTNGLPPYSTQSPTAAD 387
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
+ G + P G+ L V + + GFVS+++P
Sbjct: 388 TLQQAFTGVQQYTAIYP--------ATTLTPIGQTLPQPPQVIQQQQQRE--GFVSFDNP 437
Query: 294 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
ASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 438 ASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 471
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E A+ A A++ +
Sbjct: 85 IPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKT 144
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 145 LPGMTRPIQVKPADSESRGEDRK 167
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY--- 290
G ++ LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y
Sbjct: 70 GNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCAR 129
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
ES AQNA+ L G +Q+K + +++
Sbjct: 130 ESAIKAQNALHEQKT--LPGMTRPIQVKPADSESR 162
>gi|440800621|gb|ELR21657.1| CUGbinding protein LYLQ isoform, putative [Acanthamoeba castellanii
str. Neff]
Length = 106
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 69/91 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
Q EGPPGANLFIYH+P FGD +L + F +G+++SAKVF+DKATG SKCFGFVSY
Sbjct: 14 AAQGEGPPGANLFIYHLPPHFGDSDLYSHFAPYGQLVSAKVFIDKATGQSKCFGFVSYSM 73
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
PA+A+ AI MNG Q+ GK+L+VQ KR Q
Sbjct: 74 PAAAEMAIQQMNGFQVAGKRLRVQHKRSRAQ 104
>gi|321461452|gb|EFX72484.1| hypothetical protein DAPPUDRAFT_9147 [Daphnia pulex]
Length = 83
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 66/82 (80%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 1 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQ 60
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
AI MNG Q+G K+LKVQLKR
Sbjct: 61 AAIQAMNGFQIGMKRLKVQLKR 82
>gi|269868220|gb|ACZ52416.1| Bruno-3 transcript variant 4, partial [Drosophila pseudoobscura]
Length = 396
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+ KVQ
Sbjct: 383 MNGFQIGMKRPKVQ 396
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ +LRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTVLRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR + N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMHQMAGHMNLL 140
>gi|9246975|gb|AAF86231.1|AF248649_1 RNA-binding protein BRUNOL5 [Homo sapiens]
Length = 83
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 66/82 (80%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 1 GPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQ 60
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
AI MNG Q+G K+LKVQLKR
Sbjct: 61 AAIQAMNGFQIGMKRLKVQLKR 82
>gi|269868233|gb|ACZ52421.1| Bruno-3 transcript variant 4 [Drosophila melanogaster]
Length = 380
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 257 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 306
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+ +AT SKCFGFVS+++PASAQ AI
Sbjct: 307 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIGRATNQSKCFGFVSFDNPASAQAAIQA 366
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 367 MNGFQIGMKRLKVQ 380
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V + +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 30 MLSKQQTEDDVRQISHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 89
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 90 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
>gi|269868231|gb|ACZ52420.1| Bruno-3 transcript variant 3 [Drosophila melanogaster]
Length = 388
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 265 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 314
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKC GFVS+++PASAQ AI
Sbjct: 315 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCSGFVSFDNPASAQAAIQA 374
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 375 MNGFQIGMKRLKVQ 388
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 30 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 89
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 90 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
>gi|294884851|gb|ADF47436.1| trinucleotide repeat containing 4-like protein [Dugesia japonica]
Length = 460
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 66/84 (78%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
+ GP G+N+FIYH+PQEFGD EL F FG V+SAKV++D+AT SKCFGFVS+++ S
Sbjct: 367 LTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNS 426
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKR 319
AQ AI MNG Q+G K+LKVQLKR
Sbjct: 427 AQAAIQAMNGFQIGMKRLKVQLKR 450
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G I++ ILR SKGCAF+KY T+ +A A+ A++G
Sbjct: 55 MLGKQHTEDDVRDMFKPFGMIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMT 114
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
+ G+S LVVK+ADTEKERQ R+ Q+
Sbjct: 115 IPGASSSLVVKFADTEKERQTRKLQQ 140
>gi|269868283|gb|ACZ52446.1| Bruno-3 transcript variant 17 [Drosophila virilis]
Length = 334
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 79/134 (58%), Gaps = 10/134 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 211 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 260
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P AQ AI
Sbjct: 261 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTGAQAAIQA 320
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 321 MNGFQIGMKRLKVQ 334
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
>gi|195126493|ref|XP_002007705.1| GI13095 [Drosophila mojavensis]
gi|193919314|gb|EDW18181.1| GI13095 [Drosophila mojavensis]
Length = 611
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 78/132 (59%), Gaps = 10/132 (7%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 287 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 336
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 337 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQA 396
Query: 303 MNGCQLGGKKLK 314
MNG Q+G K+LK
Sbjct: 397 MNGFQIGMKRLK 408
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 61 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 120
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 121 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 154
>gi|269868259|gb|ACZ52434.1| Bruno-3 transcript variant 32 [Drosophila melanogaster]
Length = 154
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 71 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 130
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 131 PASAQAAIQAMNGFQIGMKRLKVQ 154
>gi|269868261|gb|ACZ52435.1| Bruno-3 transcript variant 33 [Drosophila melanogaster]
Length = 109
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 26 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 85
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 86 PASAQAAIQAMNGFQIGMKRLKVQ 109
>gi|269868301|gb|ACZ52455.1| Bruno-3 transcript variant 30 [Drosophila virilis]
Length = 302
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+
Sbjct: 217 GVGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSF 276
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQ 316
++P SAQ AI MNG Q+G K+LKVQ
Sbjct: 277 DNPTSAQAAIQAMNGFQIGMKRLKVQ 302
>gi|269868251|gb|ACZ52430.1| Bruno-3 transcript variant 28 [Drosophila melanogaster]
Length = 309
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 226 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 285
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 286 PASAQAAIQAMNGFQIGMKRLKVQ 309
>gi|269868237|gb|ACZ52423.1| Bruno-3 transcript variant 7, partial [Drosophila melanogaster]
Length = 362
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 279 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 338
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 339 PASAQAAIQAMNGFQIGMKRLKVQ 362
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 30 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 89
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 90 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
>gi|269868243|gb|ACZ52426.1| Bruno-3 transcript variant 9 [Drosophila melanogaster]
Length = 354
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 271 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 330
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 331 PASAQAAIQAMNGFQIGMKRLKVQ 354
>gi|269868210|gb|ACZ52411.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQ 370
>gi|269868214|gb|ACZ52413.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQ 370
>gi|269868245|gb|ACZ52427.1| Bruno-3 transcript variant 9 [Drosophila melanogaster]
Length = 354
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 271 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 330
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 331 PASAQAAIQAMNGFQIGMKRLKVQ 354
>gi|269868212|gb|ACZ52412.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 346
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQ 370
>gi|269868206|gb|ACZ52409.1| Bruno-3 transcript variant 28, partial [Drosophila pseudoobscura]
Length = 325
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 242 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 301
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 302 PASAQAAIQAMNGFQIGMKRLKVQ 325
>gi|269868253|gb|ACZ52431.1| Bruno-3 transcript variant 28 [Drosophila melanogaster]
Length = 309
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 226 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 285
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 286 PASAQAAIQAMNGFQIGMKRLKVQ 309
>gi|269868281|gb|ACZ52445.1| Bruno-3 transcript variant 9 [Drosophila virilis]
Length = 353
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F +FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 270 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLSFGNVISSKVFIDRATNQSKCFGFVSFDN 329
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 330 PTSAQAAIQAMNGFQIGMKRLKVQ 353
>gi|269868257|gb|ACZ52433.1| Bruno-3 transcript variant 31 [Drosophila melanogaster]
Length = 293
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 210 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 269
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 270 PASAQAAIQAMNGFQIGMKRLKVQ 293
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 33 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 92
TS CAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N
Sbjct: 1 TSYCCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMN 60
Query: 93 NL 94
L
Sbjct: 61 LL 62
>gi|298710156|emb|CBJ31866.1| trinucleotide repeat containing 4, isoform CRA_d [Ectocarpus
siliculosus]
Length = 494
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGPPGANLFIYH+PQ+ D +L AF FG VLSAKV++D+A+G SK FGFVSY P+ A
Sbjct: 365 EGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHA 424
Query: 297 QNAIAMMNGCQLGGKKLKVQLKR 319
+ AIA MNG Q+G K+LKVQ KR
Sbjct: 425 EAAIAQMNGFQIGSKRLKVQHKR 447
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E ++ +F +G I DL ++R +GCAFL Y + A AA+ A++G+ +
Sbjct: 51 IPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAAIAALHGQRR 110
Query: 61 MEGSSVPLVVKWADTEKERQ 80
++ PL V+ A+ + E++
Sbjct: 111 LDRGQNPLQVRPAEGQAEQE 130
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
LF+ IP+ +++L F+ FG + V DK +G+ + F++Y + SA AIA
Sbjct: 45 KLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAAIAA 104
Query: 303 MNG 305
++G
Sbjct: 105 LHG 107
>gi|269868249|gb|ACZ52429.1| Bruno-3 transcript variant 26 [Drosophila melanogaster]
Length = 317
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 234 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVVSSKVFIDRATNQSKCFGFVSFDN 293
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 294 PASAQAAIQAMNGFQIGMKRLKVQ 317
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 22 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 81
+ LQ+ + GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENGSRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 82 RRAQKAQSQANNL 94
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
>gi|269868227|gb|ACZ52419.1| Bruno-3 transcript variant 5, partial [Drosophila pseudoobscura]
Length = 390
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 16/134 (11%)
Query: 183 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGA 242
G P PG+ +P Y P ++ P +A P+ G I GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQRE------GCSISGPEGC 316
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NLFIYH+PQ FGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 317 NLFIYHLPQGFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 376
Query: 303 MNGCQLGGKKLKVQ 316
MNG Q+G K+LKVQ
Sbjct: 377 MNGFQIGMKRLKVQ 390
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|195117930|ref|XP_002003498.1| GI17947 [Drosophila mojavensis]
gi|193914073|gb|EDW12940.1| GI17947 [Drosophila mojavensis]
Length = 93
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/92 (61%), Positives = 68/92 (73%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
I GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++ S
Sbjct: 2 ITGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNRHS 61
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
A AI M+G Q+G K+LKVQLKR KPY
Sbjct: 62 ADAAIQAMHGFQIGTKRLKVQLKRPKDLGKPY 93
>gi|269868279|gb|ACZ52444.1| Bruno-3 transcript variant 9 [Drosophila virilis]
Length = 353
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 270 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 329
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 330 PTSAQAAIQAMNGFQIGMKRLKVQ 353
>gi|269868293|gb|ACZ52451.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 307
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 224 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 283
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 284 PTSAQAAIQAMNGFQIGMKRLKVQ 307
>gi|269868295|gb|ACZ52452.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 307
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 224 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 283
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 284 PTSAQAAIQAMNGFQIGMKRLKVQ 307
>gi|269868241|gb|ACZ52425.1| Bruno-3 transcript variant 8 [Drosophila melanogaster]
Length = 356
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+ T SKCFGFVS+++
Sbjct: 273 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRTTNQSKCFGFVSFDN 332
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 333 PASAQAAIQAMNGFQIGMKRLKVQ 356
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 24 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 83
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 84 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 117
>gi|269868263|gb|ACZ52436.1| Bruno-3 transcript variant 33 [Drosophila melanogaster]
Length = 109
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 64/84 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G LFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++
Sbjct: 26 GCSISGPEGCKLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDN 85
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 86 PASAQAAIQAMNGFQIGMKRLKVQ 109
>gi|269868297|gb|ACZ52453.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 308
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 225 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 284
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 285 PTSAQAAIQAMNGFQIGMKRLKVQ 308
>gi|269868291|gb|ACZ52450.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 307
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 224 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 283
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
P SAQ AI MNG Q+G K+LKVQ
Sbjct: 284 PTSAQAAIQAMNGFQIGMKRLKVQ 307
>gi|431896232|gb|ELK05648.1| CUG-BP- and ETR-3-like factor 4 [Pteropus alecto]
Length = 379
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT S FVS+++PASA
Sbjct: 293 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQS----FVSFDNPASA 348
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 349 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 379
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 35 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 94
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 95 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 124
>gi|269868216|gb|ACZ52414.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFV +++
Sbjct: 287 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVFFDN 346
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
PASAQ AI MNG Q+G K+LKVQ
Sbjct: 347 PASAQAAIQAMNGFQIGMKRLKVQ 370
>gi|357622928|gb|EHJ74277.1| hypothetical protein KGM_22147 [Danaus plexippus]
Length = 238
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ ASAQ
Sbjct: 150 PEGGNLFIYHLPQEFTDTDLASTFLPFGHVISAKVFIDKQTNLSKCFGFVSYDNAASAQA 209
Query: 299 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AI MNG Q+G K+LKVQLKR + ++PY
Sbjct: 210 AIQAMNGFQIGTKRLKVQLKRSKELSRPY 238
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQS 89
MEG S PLVVK+ADT+KE++ ++ Q Q+
Sbjct: 1 MEGCSAPLVVKFADTQKEKEQKKLQAMQA 29
>gi|269868289|gb|ACZ52449.1| Bruno-3 transcript variant 24 [Drosophila virilis]
Length = 322
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 239 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 298
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
P SAQ AI MNG Q+G K LKVQ
Sbjct: 299 PTSAQAAIQAMNGFQIGMKGLKVQ 322
>gi|349802789|gb|AEQ16867.1| putative cugbp elav family member 1-b [Pipa carvalhoi]
Length = 339
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
Query: 221 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
N S + G G+ G Q EGP GAN FIYH+PQEFGDQ+L F FG ++ AKVF+DK
Sbjct: 241 NQSLLAQQGLGAAGSQKEGPEGANFFIYHLPQEFGDQDLLQMFMPFGNIVPAKVFIDKQN 300
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
+SKCF FVSY++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 301 -LSKCF-FVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRS 339
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 14 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 73
+FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+A
Sbjct: 1 MFSQFGQIEECRILRGPDGLSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFA 60
Query: 74 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY 116
DT+K+++ +R + Q NA S +L G + AP Y
Sbjct: 61 DTQKDKEQKRMTQQLQQQMQQINAASMWGNLAGLSSL--APQY 101
>gi|269868299|gb|ACZ52454.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 308
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 63/84 (75%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G I GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 225 GCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDN 284
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQ 316
P SAQ AI MNG ++G K LKVQ
Sbjct: 285 PTSAQAAIQAMNGFRIGMKGLKVQ 308
>gi|391341498|ref|XP_003745067.1| PREDICTED: uncharacterized protein LOC100900989 [Metaseiulus
occidentalis]
Length = 462
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+G Q EGP G+NLFIYH+PQ+ D +L + F FG V+SAKVFVD+ T +SKCFGFVSY
Sbjct: 348 AGKQQEGPEGSNLFIYHLPQDLTDMDLVSLFAPFGEVISAKVFVDRHTQLSKCFGFVSYS 407
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 324
+ AQ AI ++G +G K+LKVQLKR N
Sbjct: 408 NGLHAQAAIRALHGFAIGDKRLKVQLKRSKMAN 440
>gi|387220073|gb|AFJ69745.1| rna binding protein napor, partial [Nannochloropsis gaditana
CCMP526]
Length = 139
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 63/84 (75%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
+EGP GANLFIYH+P + D +L AF FG V+SAKV+VDK +G SK FGFVSY+SP +
Sbjct: 17 LEGPAGANLFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLA 76
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKR 319
A AI MNG Q+G K+LKVQ KR
Sbjct: 77 ADAAIKAMNGFQIGTKRLKVQHKR 100
>gi|74220804|dbj|BAE31371.1| unnamed protein product [Mus musculus]
Length = 440
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 160/347 (46%), Gaps = 40/347 (11%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNG 118
MEG S P+VVK+ADT+K+++ RR Q+ +Q N + +G L G P Y
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLA 228
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGI-----------------IPPVNQGNAMRGASP 161
QA+ S L + +Q G + + N + S
Sbjct: 229 LLQQATSSSNLGAF--SGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSS 286
Query: 162 DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSN 221
L + P A P+ G+ ++ L G +G +N G++ N
Sbjct: 287 ALGALTSPV-AASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTI-------N 338
Query: 222 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATG 280
+ +GG G+ G G G + + Q + G Q+ A A + S + ++
Sbjct: 339 SMAALNGGLGATGLTNGTAGT---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAA 393
Query: 281 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+ GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 394 GSQKEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 440
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
>gi|440792905|gb|ELR14112.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 458
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+G Q +GPPGANLFIYH+P +GD +L F FG++LS KVF+DK T VSK FGFVS
Sbjct: 363 SGMSNQAQGPPGANLFIYHLPTHYGDGDLLTLFSPFGQILSVKVFLDKMTMVSKGFGFVS 422
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
Y S SA+ AI M+G Q+G K+LKVQLK+
Sbjct: 423 YASADSARLAIENMDGLQVGEKRLKVQLKK 452
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLP+ V E + A+F YG+I ++ +LR +S+GCAF+KY +E A+ A+ A NG+
Sbjct: 218 MLPRTVGEDGLRAIFQPYGSIIEVVVLREPDGSSRGCAFVKYHRREDAVNAINACNGQMF 277
Query: 61 MEGSSVPLVVKWAD 74
+G + PL VK+AD
Sbjct: 278 FQGQTNPLTVKFAD 291
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
LPK+++E + LF+ +G + ++ I+R S+GCAF+ Y+ + A A+E ++ K
Sbjct: 111 LPKSMTEPYIGPLFAPFGNLVEVAIIRNRATGESRGCAFVTYDNADSAELAIETLHNKQT 170
Query: 61 MEGSSVPLVVKWA 73
+ G + P+ VK+A
Sbjct: 171 LPGMTSPIQVKYA 183
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
LFI +P+ + +G F FG ++ + ++ATG S+ FV+Y++ SA+ AI
Sbjct: 104 VKLFIGQLPKSMTEPYIGPLFAPFGNLVEVAIIRNRATGESRGCAFVTYDNADSAELAIE 163
Query: 302 MMNGCQ-LGGKKLKVQLK 318
++ Q L G +Q+K
Sbjct: 164 TLHNKQTLPGMTSPIQVK 181
>gi|294886537|ref|XP_002771747.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239875509|gb|EER03563.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 422
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 142/323 (43%), Gaps = 77/323 (23%)
Query: 8 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 67
E E+ +F +G I ++ + G AF+++ KE AL A+ +NG+ +EGS P
Sbjct: 146 EEELRTIFEPFGRINEVHVP-GPHAL---YAFVRFAEKEDALKAIREVNGRVTVEGSQRP 201
Query: 68 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSY 127
L VK A++ + R A Q Q +GY+ G+Y
Sbjct: 202 LEVKVAESRAAKADRNAHHHQQQ----------------------------HGYEG-GAY 232
Query: 128 GLMQYRLPPMQNQPGFHGIIPPVNQGNAMR-----GASPDLSSNMGPRNYAMPPSGFVGS 182
P + G+ G P + G R G + D + PR + F
Sbjct: 233 D-------PTTSSSGYGGSPPLIAAGGTSRPLFKAGMAADPARTQAPRTAGVWTEYFTMD 285
Query: 183 GYP-----AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIE 237
P +Q+ MP P+N ++ P Q +
Sbjct: 286 DTPYYHNARTNEVQWEMPAEF----RNPIN----------VHTAP------------QTK 319
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGAN+F++ +P + + +L + F +FG ++SAKV VDK TG+S+ +GF+SY++ SA
Sbjct: 320 GPPGANVFVFSVPDAWTEDDLRDHFSSFGNIVSAKVVVDKHTGLSRGYGFISYDNAQSAG 379
Query: 298 NAIAMMNG-CQLGGKKLKVQLKR 319
A+A MNG G+++KVQ+K+
Sbjct: 380 RAVAEMNGFVAANGRRIKVQIKK 402
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 23/100 (23%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LP + E+++ A+F YG ++D+ ILR S S+G AF+++ +AA++A+NG H+
Sbjct: 21 LPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAFVRFRDIPSGMAAIKALNG-HR 79
Query: 61 M---------------------EGSSVPLVVKWADTEKER 79
+ + S +PL V A E ER
Sbjct: 80 LSHNTSTSCIDNDVESVDDMSFDQSHIPLSVSLAQGEAER 119
>gi|397632370|gb|EJK70525.1| hypothetical protein THAOC_08111, partial [Thalassiosira oceanica]
Length = 548
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 62/83 (74%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP GANLFIYH+P + D +L AF FG V+SAKV+VD+ TG SK FGFVSY+S SA
Sbjct: 366 EGPAGANLFIYHLPIDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVMSA 425
Query: 297 QNAIAMMNGCQLGGKKLKVQLKR 319
+ AI MNG Q+G K+LKVQ KR
Sbjct: 426 ELAIEQMNGFQIGNKRLKVQHKR 448
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK + E +++ +F YG I DL ++R + +GCAF+ +E+ E A+ + ++G++K
Sbjct: 30 VPKTLIEEDLAYVFEPYGPIVDLTVIRDRRSGNHRGCAFVTFESGEDAMRVVADMHGRYK 89
Query: 61 MEGSSVPLVVKWADTE 76
+G+ P V+ A E
Sbjct: 90 FDGAPWPAQVRPAAGE 105
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF+ +P+ +++L F+ +G ++ V D+ +G + FV++ES A +A M
Sbjct: 25 LFVGQVPKTLIEEDLAYVFEPYGPIVDLTVIRDRRSGNHRGCAFVTFESGEDAMRVVADM 84
Query: 304 NG 305
+G
Sbjct: 85 HG 86
>gi|330794954|ref|XP_003285541.1| hypothetical protein DICPUDRAFT_97075 [Dictyostelium purpureum]
gi|325084544|gb|EGC37970.1| hypothetical protein DICPUDRAFT_97075 [Dictyostelium purpureum]
Length = 190
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q GP G+NLF+Y+IP F DQEL FQ +G V+SAKV++DK TGVSK FGF+SY++P
Sbjct: 98 QSVGPNGSNLFVYNIPNYFTDQELSTLFQQYGNVVSAKVYLDKNTGVSKGFGFISYDNPT 157
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SA AI+ +NG + GKKLKV LK+ ++PY
Sbjct: 158 SASLAISNLNGSMMVGKKLKVSLKQAGHGSQPY 190
>gi|124286791|ref|NP_034290.2| CUGBP Elav-like family member 2 isoform 6 [Mus musculus]
Length = 478
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 157/347 (45%), Gaps = 44/347 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNG 118
MEG S P+VVK+ADT+K+++ RR Q+ +Q N + +G L G P Y
Sbjct: 216 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLA 270
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGI-----------------IPPVNQGNAMRGASP 161
QA+ S L + +Q G + + N + S
Sbjct: 271 LLQQATSSSNLGAF--SGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSS 328
Query: 162 DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSN 221
L + P A P+ G+ ++ L G +G LNN A N
Sbjct: 329 ALGALTSPV-AASTPNSTAGAAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALN-- 382
Query: 222 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATG 280
GG G+ G G G + + Q + G Q+ A A + S + ++
Sbjct: 383 ------GGLGATGLTNGTAGT---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAA 431
Query: 281 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+ GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 432 GSQKEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 478
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|348575367|ref|XP_003473461.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Cavia
porcellus]
gi|354467974|ref|XP_003496442.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4
[Cricetulus griseus]
Length = 478
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 156/344 (45%), Gaps = 38/344 (11%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNG 118
MEG S P+VVK+ADT+K+++ RR Q+ +Q N + +G L G P Y
Sbjct: 216 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT-----WGNLTGLGGLTPQYLA 270
Query: 119 YGYQASGSYGLMQY---------RLPPMQNQPGFHGIIPPVNQGNAMRGASP--DLSSNM 167
QA+ S L + +QN A+P SS +
Sbjct: 271 LLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSAL 330
Query: 168 GPRN---YAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPST 224
G A P+ G+ ++ L G +G LNN A N
Sbjct: 331 GALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALN----- 382
Query: 225 SSSGGTGSGGQIEGPPGANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATGVSK 283
GG G+ G G G + + Q + G Q+ A A + S + ++ S+
Sbjct: 383 ---GGLGATGLTNGTAGT---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAAGSQ 434
Query: 284 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 KEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 478
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|237757269|ref|NP_001153764.1| CUGBP Elav-like family member 2 isoform 7 [Mus musculus]
Length = 472
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 157/347 (45%), Gaps = 44/347 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 150 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 209
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNG 118
MEG S P+VVK+ADT+K+++ RR Q+ +Q N + +G L G P Y
Sbjct: 210 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLA 264
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGI-----------------IPPVNQGNAMRGASP 161
QA+ S L + +Q G + + N + S
Sbjct: 265 LLQQATSSSNLGAF--SGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSS 322
Query: 162 DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSN 221
L + P A P+ G+ ++ L G +G LNN A N
Sbjct: 323 ALGALTSPV-AASTPNSTAGAAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALN-- 376
Query: 222 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATG 280
GG G+ G G G + + Q + G Q+ A A + S + ++
Sbjct: 377 ------GGLGATGLTNGTAGT---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAA 425
Query: 281 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+ GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 426 GSQKEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 472
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 59 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 118
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 119 KTLPGMHHPIQMKPADSEK 137
>gi|294946457|ref|XP_002785076.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
gi|239898488|gb|EER16872.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
Length = 430
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 148/332 (44%), Gaps = 55/332 (16%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+P +V +AE+ +FS YGT+ + ++ + AF+++ K L A++A+N K
Sbjct: 115 VPADVDDAELKRVFSQYGTVTEAYCIQPRRPGGNRAAFVRFSKKSDGLRAIDALNEKFTF 174
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 121
+ P+ VK A+T ++R A R Q ++P + Q PS + GY P G
Sbjct: 175 PNNDRPVAVKCAETREQRDAHR------QDMDVPRSQQQQPSNRFSNDSGYGP-----GP 223
Query: 122 QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 181
++G YG +P QP G + LS + G Y +G
Sbjct: 224 TSTGGYGQRITPVPTAAAQPRQAG------------DWTEYLSQSDGRYYYHNSRTG--- 268
Query: 182 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSG-------- 233
Q+ +PY +G P + P P S G G G
Sbjct: 269 -------QTQWDVPYEFQSMG------PPPTAVP------PQQDHSYGGGYGLMQTPRSQ 309
Query: 234 -GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
+ +GP GAN+F+Y+IP E+ D +L F + G + + +V +D T SK +GFVS+
Sbjct: 310 QQRRDGPMGANVFVYNIPPEWTDNDLVREFGSCGPLSTTRVIIDSQTNQSKGYGFVSFRE 369
Query: 293 PASAQNAIAMMNG-CQLGGKKLKVQLKRDNKQ 323
SA A+ M+G G++LKVQ+K+ ++
Sbjct: 370 VRSAMKAVETMDGFLTSTGRRLKVQIKKGEEE 401
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG----CAFLKYETKEQALAALEAING 57
LP + E EV +LF YG ++++ I+R KG CAF+KY ++A AA++ + G
Sbjct: 15 LPCDWDEEEVRSLFGPYGDVEEVSIIRPKTNPGKGQKYGCAFVKYGAIQEAAAAIQGMAG 74
Query: 58 KHKMEGSSVPLVVKWADTEKER 79
K + ++ PL +++A+ E ER
Sbjct: 75 KQTVNENAGPLQIQYANGEPER 96
>gi|294941928|ref|XP_002783310.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239895725|gb|EER15106.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 429
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 142/328 (43%), Gaps = 80/328 (24%)
Query: 8 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 67
E E+ +F +G I ++ + AF+++ KE AL A+ +NG+ +EGS P
Sbjct: 146 EEELRTIFEPFGRINEVHV----PGPHALYAFVRFAEKEDALKAIREVNGRVTVEGSQRP 201
Query: 68 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSY 127
L VK A++ + R A Q Q +GY+ G+
Sbjct: 202 LEVKVAESRAAKADRNAHHQQQQ----------------------------HGYEGVGAT 233
Query: 128 GLMQY-----RLP-----PMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPS 177
GL LP PG P + N +RG SP S PR +
Sbjct: 234 GLRLMAGAAASLPINGATSSLTSPGRLD-TPTI---NGIRGGSP--SGTQAPRTAGVWTE 287
Query: 178 GFVGSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGS 232
F P +Q+ MP P+N ++ P T
Sbjct: 288 YFTMDDTPYYHNARTNEVQWEMPAE----FRNPIN----------VHTAPQT-------- 325
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
+GPPGAN+F++ +P + + +L + F +FG ++SAKV VDK TG+S+ +GF+SY++
Sbjct: 326 ----KGPPGANVFVFWVPDAWTEDDLRDHFSSFGNIVSAKVVVDKHTGLSRGYGFISYDN 381
Query: 293 PASAQNAIAMMNG-CQLGGKKLKVQLKR 319
SA A+A MNG G+++KVQ+K+
Sbjct: 382 AQSAGRAVAEMNGFVAANGRRIKVQIKK 409
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LP + E+++ A+F YG ++D+ ILR S S+G AF+++ +AA++A+NG
Sbjct: 21 LPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAFVRFRDIPSGMAAIKALNGYRL 80
Query: 61 MEGSSVPLV 69
+S +
Sbjct: 81 CHNTSTSCI 89
>gi|395539009|ref|XP_003771466.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Sarcophilus
harrisii]
Length = 478
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 157/347 (45%), Gaps = 44/347 (12%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNG 118
MEG S P+VVK+ADT+K+++ RR Q+ +Q N + +G L G P Y
Sbjct: 216 MEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT-----WGNLTGLGGLTPQYLA 270
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGI-----------------IPPVNQGNAMRGASP 161
QA+ S L + +Q G + + N + S
Sbjct: 271 LLQQATSSSNLGAF--SGIQQMAGMNALQLQNLATLAAAAAAAQTSATTTNANPLSTTSS 328
Query: 162 DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSN 221
L + P A P+ G+ ++ L G +G LNN A N
Sbjct: 329 ALGALTSPV-AASTPNSTAGAAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALN-- 382
Query: 222 PSTSSSGGTGSGGQIEGPPGANLFIYHIPQEF-GDQELGNAFQAFGRVLSAKVFVDKATG 280
GG G+ G G G + + Q + G Q+ A A + S + ++
Sbjct: 383 ------GGLGATGLTNGTAGT---MDALTQAYSGIQQYAAA--ALPTLYSQSLLQQQSAA 431
Query: 281 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
S+ GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 432 GSQKEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 478
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
>gi|300123103|emb|CBK24110.2| unnamed protein product [Blastocystis hominis]
Length = 372
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 62/88 (70%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
SG EGP GANLF+YH+P E D +L F +G +LSAKV+VDK TG SK FGFVS+
Sbjct: 274 SGAFQEGPEGANLFVYHLPHEMADSDLTTLFVPYGTILSAKVYVDKQTGESKGFGFVSFN 333
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKR 319
S +AQ AI MNG Q+ K+LKVQ+K+
Sbjct: 334 SFEAAQEAIRHMNGFQIDSKRLKVQVKK 361
>gi|325191692|emb|CCA25727.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 260
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 65/89 (73%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
+GPPG NLF++HIP + +Q+L N F +G V+SA++ V+K TG S+ FGFVSY++P SA
Sbjct: 147 QGPPGCNLFVFHIPNDMTNQDLFNYFATYGNVISARIMVEKETGRSRGFGFVSYDNPPSA 206
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
AI MNG Q+G K+LKVQ K++ N+
Sbjct: 207 DAAIKGMNGFQVGRKRLKVQHKKERDPNQ 235
>gi|301108515|ref|XP_002903339.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262097711|gb|EEY55763.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 255
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 81/136 (59%), Gaps = 8/136 (5%)
Query: 190 LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHI 249
+QYP PY GG P + G V P ++ G +GPPG NLF++HI
Sbjct: 100 MQYPPPY-GGSSYMYPFPQAYGYPPQIVGPGPPIQTTESG-------QGPPGCNLFVFHI 151
Query: 250 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 309
P + +Q+L N F FG V+SA++ V+K TG S+ FGFVSY++ SA+ AI MNG Q+G
Sbjct: 152 PNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVG 211
Query: 310 GKKLKVQLKRDNKQNK 325
K+LKVQ K++ Q +
Sbjct: 212 RKRLKVQHKKEKSQGQ 227
>gi|348676035|gb|EGZ15853.1| hypothetical protein PHYSODRAFT_346711 [Phytophthora sojae]
Length = 264
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 183 GYPAVPG--LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPP 240
GYP G +QYP PY GG P + G V P ++ G +GPP
Sbjct: 98 GYPQPYGQPMQYPPPY-GGSGYMYPFPQAYGYPPQIVGPGPPIQTTESG-------QGPP 149
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NLF++HIP + +Q+L N F FG V+SA++ V+K TG S+ FGFVSY++ SA+ AI
Sbjct: 150 GCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAI 209
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQ 323
MNG Q+G K+LKVQ K++ Q
Sbjct: 210 KGMNGFQVGRKRLKVQHKKEKNQ 232
>gi|255636493|gb|ACU18585.1| unknown [Glycine max]
Length = 161
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 50/52 (96%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 52
MLPKN+SE EVS LFS+YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL
Sbjct: 110 MLPKNISEDEVSDLFSMYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 161
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK ++E EV A+F + + ++ I+R + + +GC F+ ++E+A A+ A + K
Sbjct: 23 VPKRMAEDEVLAMFKEFALVDEVNIIRDKASRAPRGCCFVICPSREEADKAVNACHNKKT 82
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+S PL VK+AD E ER
Sbjct: 83 LPGASSPLQVKYADGELER 101
>gi|301108523|ref|XP_002903343.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262097715|gb|EEY55767.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 260
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 8/134 (5%)
Query: 190 LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHI 249
+QYP PY GG P + G V P ++ G +GPPG NLF++HI
Sbjct: 105 MQYPPPY-GGSGYMYPFPQAYGYPPQIVGPGPPIQTTESG-------QGPPGCNLFVFHI 156
Query: 250 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 309
P + +Q+L N F FG V+SA++ V+K TG S+ FGFVSY++ SA+ AI MNG Q+G
Sbjct: 157 PNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVG 216
Query: 310 GKKLKVQLKRDNKQ 323
K+LKVQ K++ Q
Sbjct: 217 RKRLKVQHKKEKSQ 230
>gi|328873245|gb|EGG21612.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 370
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 57/78 (73%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
+LFIY++P +GD EL N FQ +G V+SAKVF+DK TG SKCFGFVSY+ SA AI
Sbjct: 291 DLFIYYLPASYGDAELKNLFQQYGNVVSAKVFIDKNTGQSKCFGFVSYDRSQSAIQAINN 350
Query: 303 MNGCQLGGKKLKVQLKRD 320
+NG + GKKLKV KRD
Sbjct: 351 LNGFHVEGKKLKVNFKRD 368
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 7 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 66
+E ++ LFS YG I+D+ I+R KG F+K+ +E+A A+ ++ K + GS++
Sbjct: 114 NEDQIKQLFSKYGNIEDINIVREPDGKPKGYGFVKFSMREEAEEAIRDMDSKQTLPGSTL 173
Query: 67 PLVVKWADTEKERQARRAQK 86
P++VK+ADT ERQ R+ Q+
Sbjct: 174 PIIVKFADT--ERQKRKKQQ 191
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+P + E E+S +F +G+I ++ I++ + + +GCAF+ Y TKE+A A+ +N ++
Sbjct: 21 IPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPRGCAFISYGTKEEADNAINTMNATNQ 80
Query: 61 MEGS-SVPLVVKWADTEKERQARR 83
G + PL VK++D E E+ R+
Sbjct: 81 YIGDMNKPLQVKYSDNEIEKMERK 104
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P G +F+ HIP + EL F FG +L+ + DK T V + F+SY + A N
Sbjct: 11 PQGFKVFVGHIPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPRGCAFISYGTKEEADN 70
Query: 299 AIAMMNGC 306
AI MN
Sbjct: 71 AINTMNAT 78
>gi|290985168|ref|XP_002675298.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
gi|284088893|gb|EFC42554.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
Length = 641
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 147/350 (42%), Gaps = 50/350 (14%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P + E + F ++G I ++I+ + Q SK F K+E ++ AL+A++ +NG
Sbjct: 218 IPPHYDEETLKQAFEVFGPISKVKIMIDINTQRSKCYGFCKFENRKDALSAIQKMNGSKL 277
Query: 61 MEGSS---VPLVVKWADTEKERQARRAQKAQ--------------SQANNLPNADSQHPS 103
+ SS +PLVV++A+TE E+Q R+ + Q S N + +PS
Sbjct: 278 DDDSSKDILPLVVRFAETEHEKQKRKLKTRQIIRPPTHVPNPYVHSHHTGFSNPNGMNPS 337
Query: 104 LFGALPMGYAPPYNGYGYQASGSYGL---------MQYRLP-----PMQNQPGFHGIIPP 149
L+ + PM Q S + M Y +P P+ + P
Sbjct: 338 LY-SYPMFNQMAMRRDDQQDETSQDMTYHSDVPYHMTYFVPHHMGVPVSSHPTDRF---S 393
Query: 150 VNQGNAMRGASPDLSSNMGPRNYAMPP--SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLN 207
++ + D +N GP + P + + P P PM M
Sbjct: 394 KDKLENEKSNESDDQNNQGPFLHNFNPYYNPYFNPYTPYNPYYHVPMYDESSM------- 446
Query: 208 NSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGR 267
N + + N S+S G+ ANLFI+H+P + D +L F FG
Sbjct: 447 NENQEQTHTKRSKNESSSPEDKNSKSGET-----ANLFIFHLPGDVDDSKLMELFSKFGE 501
Query: 268 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 317
+ S KV D T +SK +GFV Y + SA A++ MN ++G K LKV
Sbjct: 502 IESVKVIRDPKTNLSKGYGFVKYCNIDSAMEAVSKMNSYKIGKKHLKVSF 551
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ S G E +NLFI +IP + ++ L AF+ FG + K+ +D T SKC+GF
Sbjct: 199 SNSAGNKEKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKIMIDINTQRSKCYGFCK 258
Query: 290 YESPASAQNAIAMMNGCQLGG 310
+E+ A +AI MNG +L
Sbjct: 259 FENRKDALSAIQKMNGSKLDD 279
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC-FGFVSYESPAS 295
E N+F+ ++P F D++L F FG ++S V DK S FGFV + +
Sbjct: 117 ENSDLCNVFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKTRENSSLGFGFVRFSNENE 176
Query: 296 AQNAIAMMNGCQLGGKKLKVQL 317
AQ+AI +N +G K+L +L
Sbjct: 177 AQDAIQGLNEKSIGNKRLLCKL 198
>gi|223995723|ref|XP_002287535.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
gi|220976651|gb|EED94978.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
Length = 253
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 63/86 (73%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
G +GP GANLFI+HIP +F +QE+ F FG+VLSA++ V+ TG S+ FGFVSY+S
Sbjct: 59 GSAKGPEGANLFIFHIPNDFSNQEMYALFAQFGKVLSARIMVESDTGRSRGFGFVSYDSA 118
Query: 294 ASAQNAIAMMNGCQLGGKKLKVQLKR 319
SA +AI+ +NG + GK+LKVQ K+
Sbjct: 119 RSAADAISHLNGYSVKGKRLKVQHKQ 144
>gi|328871825|gb|EGG20195.1| hypothetical protein DFA_07315 [Dictyostelium fasciculatum]
Length = 551
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 60/87 (68%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q GP G+NLF+Y+IP + D EL F FG V+S+KVF+DK TG SK FGFVS+++P
Sbjct: 461 QSVGPSGSNLFVYNIPNFYTDVELSVLFDPFGAVISSKVFIDKNTGTSKGFGFVSFDNPN 520
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDN 321
SA AI +NG L GKKLKV +K N
Sbjct: 521 SATTAITNLNGMMLNGKKLKVTVKNSN 547
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLPK +E +V LFS YG + ++ ILRG SK C F+K++++E L A+ ++NG +
Sbjct: 100 MLPKEYNEDDVRKLFSDYGDVDEICILRGPNNQSKSCGFIKFQSRESCLNAISSLNG-IR 158
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ S LVVK+ADTEK+R+ +
Sbjct: 159 IPPSPHNLVVKFADTEKDRKNK 180
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 2 LPKNVSEAEVSALFSIY-GTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKH 59
+PK+ +E ++ +F+ + +I++++++R + Q +GCAF+ + A +++ ++
Sbjct: 12 IPKSFTEDDLREMFADFVDSIEEIKVIRNKATQEPQGCAFITMTNPDVAEKSIQQLHNSK 71
Query: 60 KMEGSSVPLVVKWADTEKERQARR 83
K G S L VK+AD+E+E+ + +
Sbjct: 72 KFPGVSNFLQVKYADSEQEKLSTK 95
>gi|313227641|emb|CBY22788.1| unnamed protein product [Oikopleura dioica]
Length = 401
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%)
Query: 218 ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 277
A+ + + SS+ GG GP GANLF+YH+P+ F D +L F G ++SAKV+VD+
Sbjct: 245 ASDDSTKSSTENQTIGGTQAGPEGANLFVYHLPKRFNDSDLYALFSTIGELMSAKVYVDR 304
Query: 278 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
T SKCFGFVSY+ A AI N Q+ K+LKV++K+
Sbjct: 305 HTQESKCFGFVSYKHIIDASAAIKRFNTYQVDDKRLKVEMKK 346
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLP E + +F YG I++LQ+LR TS+ CAFL + ++ +A +A++A+N
Sbjct: 75 MLPITCDEEMLKKMFEQYGKIQELQVLRKFNGTSRRCAFLTFSSRLEAQSAVQALNNTVV 134
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK-AQSQANNLPNADSQHPSLFGALPM 110
+ +VV+ ADT K+++ R+ ++ +S A L + L G L +
Sbjct: 135 SSICAQGMVVRLADTPKQKEKRKLERQLKSCAMQLQRLCTDEDDLVGKLLL 185
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 14 LFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 72
+F +G + DLQILR S+GC F+ + + A A A+NG + G P+ ++
Sbjct: 1 MFKEFGEVFDLQILRDRITGHSRGCCFVTFFETKSADDAQRALNGIRVLPGMLNPVQMRA 60
Query: 73 ADTEKERQARR 83
AD+EK R RR
Sbjct: 61 ADSEK-RSDRR 70
>gi|298714689|emb|CBJ27614.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 473
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 64/90 (71%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++GP G NLF++HIP ++ L F FG V+SA++ V+KATG S+ FGFVSY++ S
Sbjct: 155 LQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDS 214
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
A+ AI+ MNG Q+ K+LKVQ K+D ++ +
Sbjct: 215 AEKAISQMNGYQIEHKRLKVQHKKDKERER 244
>gi|301100224|ref|XP_002899202.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262104119|gb|EEY62171.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 496
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 68/91 (74%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q+EGP GANLFIYH+P + D +L AF FG V+SAKV++DK TG SK FGFVSY+S
Sbjct: 338 QLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSAD 397
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
+A AIA MNG Q+G K+LKVQ KR ++++
Sbjct: 398 AADAAIASMNGFQIGTKRLKVQHKRIHQRSD 428
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ + ++G ++DL I+R +GCAF Y T++ A A++ ++ K
Sbjct: 39 VPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAVQELHNKVT 98
Query: 61 MEGSSVPLVVKWAD 74
+ S PL V+ A+
Sbjct: 99 LPQSINPLQVRPAE 112
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 237 EGPPGAN----LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
EG GA+ LFI IP+ + + + F+ FG + + ATG SK F+ ++
Sbjct: 112 EGQAGASQEHKLFIGMIPKTADEAAIRDVFELFGSIEEVYILRHPATGQSKGCAFLKFKE 171
Query: 293 PASAQNAIAMMNGC---QLGGKKLKVQLKRDNKQ 323
+SA AI +NG G L V+ +Q
Sbjct: 172 RSSALAAIEEVNGIVTMDRGTSPLVVKFADSRRQ 205
>gi|169659189|dbj|BAG12779.1| putative RNA binding protein [Sorogena stoianovitchae]
Length = 103
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
+GP GANLF++H+P E+ D +L F FG V+S +V DK TG SK FGFVSY++P SA
Sbjct: 2 QGPAGANLFVFHLPNEWKDHDLYGHFSEFGNVISHRVMTDKQTGRSKGFGFVSYDNPVSA 61
Query: 297 QNAIAMMNGCQLGGKKLKVQLKR 319
AI MNG Q G K+LKV +K+
Sbjct: 62 GMAITRMNGFQAGQKRLKVSIKK 84
>gi|289812790|gb|ADD18414.1| RNA-binding protein CUGBP1/BrUNO [Glossina morsitans morsitans]
Length = 706
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 47/59 (79%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
G QIEGP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS++
Sbjct: 648 GKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTNLSKCFGFVSFD 706
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ +N
Sbjct: 392 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKTLNQNKT 451
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 452 MEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 485
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ EA++ +F YG + + +LR SKGC F+ + T+ AL A +A++
Sbjct: 306 VPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALKAQDALHNVKT 365
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+ G P+ +K AD+E + +
Sbjct: 366 LNGMYHPIQMKPADSENRNERK 387
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 296 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 355
Query: 299 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A+ N L G +Q+K + +N+
Sbjct: 356 AQDALHNVKTLNGMYHPIQMKPADSENR 383
>gi|429328279|gb|AFZ80039.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 525
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 62/85 (72%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPG+NLFI+HIP E+ +L +F FGRV+SA++ DK+TG K + FVSY++P SA
Sbjct: 422 GPPGSNLFIFHIPNEWTYNDLVRSFSQFGRVISARIATDKSTGRHKGYAFVSYDNPDSAS 481
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNK 322
A+A MNG + GK+LKV +K+ ++
Sbjct: 482 QAVANMNGFTVLGKRLKVTVKKGDE 506
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LF+ IP+ + + E+ F+ FG+V V DK T KC FV S + A
Sbjct: 67 PVEIKLFLARIPKSYEESEIKKMFEEFGKVKEVAVIRDKNTNAHKCCAFVRMCSISQADA 126
Query: 299 AIAMMNG-CQLGGKKLKVQLK 318
AI +N C + VQ+K
Sbjct: 127 AIRSLNNQCVVDTALGSVQIK 147
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+PK+ E+E+ +F +G +K++ ++R + K CAF++ + QA AA+ ++N +
Sbjct: 77 IPKSYEESEIKKMFEEFGKVKEVAVIRDKNTNAHKCCAFVRMCSISQADAAIRSLNNQCV 136
Query: 61 MEGSSVPLVVKWADTEKER 79
++ + + +K+A E +R
Sbjct: 137 VDTALGSVQIKYAVGETDR 155
>gi|156083038|ref|XP_001609003.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis T2Bo]
gi|154796253|gb|EDO05435.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis]
Length = 420
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLFI+HIP E+ +L + F FG++LS+++ D++TG K + FVSY++P SA
Sbjct: 283 GPPGANLFIFHIPNEWTHHDLVHTFSQFGKILSSRIASDRSTGRHKGYAFVSYDTPESAA 342
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQNKP 326
AI +NG + GK+LKV +K+ ++ P
Sbjct: 343 QAIQHLNGFTVLGKRLKVTIKKGDESTVP 371
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PKN E + +F YGT++D+ I++ KGCAF+K KEQ L A+ +++G ++
Sbjct: 131 IPKNAEEDLIREIFGPYGTLEDIFIMKDQNGAGKGCAFVKMAYKEQGLYAIRSLDGMKQL 190
Query: 62 EGSSVPLVVKWADTE 76
EG P+ V++A+++
Sbjct: 191 EGCPRPMEVRFAESK 205
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK EAE+ +F +G +KD+ I+R + K CAF++ + QA AA++ +N
Sbjct: 31 IPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADAAIKRLNNNCV 90
Query: 61 MEGSSVPLVVKWADTEKER 79
++ + ++VK+A E ER
Sbjct: 91 VDTALGAVLVKYASGETER 109
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LF+ IP+ + + E+ F+ FG V + DKAT KC FV S + A
Sbjct: 21 PVEIKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADA 80
Query: 299 AIAMMN 304
AI +N
Sbjct: 81 AIKRLN 86
>gi|71034161|ref|XP_766722.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353679|gb|EAN34439.1| RNA-binding protein, putative [Theileria parva]
Length = 268
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
T +GG GPPGANLF++H+P + D +L F+ FG V+SA+V D A G ++ FGF+S
Sbjct: 142 TVAGGSSFGPPGANLFVFHVPANWNDLDLVEHFKHFGNVISARVQRDSA-GRNRGFGFIS 200
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
Y++P SA AI MNG +GGK LKVQLK+
Sbjct: 201 YDNPQSAVVAIKNMNGFSVGGKYLKVQLKK 230
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+P N SE E+ S YG + L + + + G AF+ +E+ + A A++A+NGK
Sbjct: 15 IPSNTSEEELKEELSKYGQLVSLFYMPDQMKQNNGWAFVTFESNQSASNAIDALNGKIIF 74
Query: 62 EGSSVPLVVKWA 73
+G++V L V +A
Sbjct: 75 QGTTVGLEVVYA 86
>gi|84997698|ref|XP_953570.1| hypothetical protein [Theileria annulata]
gi|65304567|emb|CAI72892.1| hypothetical protein, conserved [Theileria annulata]
Length = 295
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
+GG GPPGANLF++H+P + D +L F+ FG V+SA+V D A G ++ FGF+SY+
Sbjct: 166 AGGSSFGPPGANLFVFHVPANWNDLDLVEHFKHFGNVISARVQRDSA-GRNRGFGFISYD 224
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKR 319
+P SA AI MNG +GGK LKVQLK+
Sbjct: 225 NPQSAVVAIKNMNGFSVGGKYLKVQLKK 252
>gi|452823093|gb|EME30106.1| RNA-binding protein [Galdieria sulphuraria]
Length = 477
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
++ GP NLF+Y IP ++ D L N F FG++LS+ VF+DK T SK FGFVSY P
Sbjct: 384 RVRGPSECNLFVYGIPPDWDDAMLANLFLPFGKLLSSNVFIDKRTQRSKGFGFVSYAYPD 443
Query: 295 SAQNAIAMMNGCQL-GGKKLKVQLKRDNKQN 324
SA AIAM+NG L G+ LKV LK++ N
Sbjct: 444 SAHMAIAMLNGMTLPNGRTLKVSLKKEKNDN 474
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT-SKGCAFLKYETKEQALAALEAINGKHK 60
LP NV E ++ + YGT+ + I+R S+GC F + +E+A A++A++G
Sbjct: 47 LPSNVVEEDLRRICEPYGTVLETTIVRNRMTNQSRGCGFCVFHNREEADNAIQALHGTKP 106
Query: 61 MEGSSVPLVVKWADTEKE 78
S PL V+ A+ +
Sbjct: 107 FPSGSKPLQVRLAEKNSD 124
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
+FI +P +++L + +G VL + ++ T S+ GF + + A NAI +
Sbjct: 42 IFIGQLPSNVVEEDLRRICEPYGTVLETTIVRNRMTNQSRGCGFCVFHNREEADNAIQAL 101
Query: 304 NGCQ---LGGKKLKVQLKRDN 321
+G + G K L+V+L N
Sbjct: 102 HGTKPFPSGSKPLQVRLAEKN 122
>gi|294868388|ref|XP_002765513.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239865556|gb|EEQ98230.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 403
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 55/289 (19%)
Query: 38 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNA 97
AF+++ ++ A+ A+ +NG+ ++EGS L VK AD R R
Sbjct: 155 AFVRFAEEKDAMRAISDVNGRVQVEGSQRMLEVKVADPSSSRGPTRR------------- 201
Query: 98 DSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMR 157
P G PP + YG A Y P +Q P F + ++QG
Sbjct: 202 -----------PSGSLPPVSSYGSPAGNGYD----HTPSVQ--PRF---VSGMSQGYGQ- 240
Query: 158 GASPDLSSNM-GPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPA 216
AS L+S M G + + Y A+ G Y H +N+ P
Sbjct: 241 -ASVPLNSTMAGDTQGQCSRTIGAWTEYFAMDGTPYY---------HNSQSNTVQWELP- 289
Query: 217 VANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVD 276
+ NPS + +G GP GAN+FI+ +P + + +L F +FG ++SAKV VD
Sbjct: 290 IEFKNPSAAHTGS--------GPAGANIFIFSVPDAWTEMDLRQHFGSFGNIVSAKVVVD 341
Query: 277 KATGVSKCFGFVSYESPASAQNAIAMMNGCQL-GGKKLKVQLKRDNKQN 324
K TG+S+ +GF+SY++ SA+ A+ M+G G+K+KVQ+K+ N
Sbjct: 342 KQTGISRGYGFISYDNCDSAERAVQTMDGYMAPTGRKIKVQIKKGEGSN 390
>gi|269868138|gb|ACZ52375.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G
Sbjct: 47 MLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQT 106
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 107 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
>gi|156086340|ref|XP_001610579.1| RNA binding motif containing protein [Babesia bovis T2Bo]
gi|154797832|gb|EDO07011.1| RNA binding motif containing protein [Babesia bovis]
Length = 278
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPG+NLF++H+P E+ D +L FQ+FG ++SA+V +D G ++ +GFVSY++P SA
Sbjct: 162 GPPGSNLFVFHLPPEWSDSDLLLHFQSFGTIVSARVQLD-TVGRNRGYGFVSYDNPTSAL 220
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNKQ 323
AI MNG + GK LKVQLKR +Q
Sbjct: 221 TAIKNMNGYSVCGKYLKVQLKRGEEQ 246
>gi|221053434|ref|XP_002258091.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193807924|emb|CAQ38628.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 292
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGAN+F++H+P + D EL FQ FG VLSA++ D ++G +K +GFVS+ +P SA
Sbjct: 151 GPPGANVFVFHVPSHWTDMELYQHFQHFGYVLSARIQRD-SSGRNKGYGFVSFNNPESAM 209
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
NAI M+G + GK LKVQLK+
Sbjct: 210 NAIKGMHGFYVSGKHLKVQLKK 231
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PK+V+E E+ S YG I + + + Q +G AF+ Y+ + +A A+EA++ K
Sbjct: 14 IPKDVTEEELKTEASKYGVITQVYYVPATVQNPRGWAFITYKERSEAYKAIEALDYKSIF 73
Query: 62 EGSSVPLVVKWA 73
S PL V++A
Sbjct: 74 PNSQRPLDVRFA 85
>gi|403339634|gb|EJY69082.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1147
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 49/190 (25%)
Query: 172 YAMP-PSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPS------- 223
Y MP S F+ P GL P GML PLN P ++ P+ +N+
Sbjct: 841 YGMPMASPFLNPIMPTTTGLSIP-----GMLD--PLNMKPFNMYPSASNNTGDIMAQSQQ 893
Query: 224 -------------TSSSGGTGS-------------------GGQIEGPPGANLFIYHIPQ 251
T+++ G G+ G +GPPGANLFI+H+P
Sbjct: 894 SLSQNDHSQAGSLTNTNQGVGNQQNLSEMNHEEQMQHQAIHGQYKQGPPGANLFIFHLPN 953
Query: 252 EFGDQELGNAFQAF--GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 309
E+GD +L F +F G ++S ++ DK G SK FGFVSY++P A AI ++NG
Sbjct: 954 EWGDLDLYLFFDSFKLGNIVSVRIMTDKENGRSKGFGFVSYDNPHGATQAIKIINGKSAL 1013
Query: 310 GKKLKVQLKR 319
GK+LKV++K+
Sbjct: 1014 GKRLKVEMKK 1023
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 38/55 (69%)
Query: 9 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 63
++V+ LF+ +G I++L + + S++ KG F+KY+T++QA+ A+ +N K +G
Sbjct: 631 SDVNKLFTTFGDIEELYLFKDSEEKFKGSCFIKYQTRKQAVKAIARLNQKGNSDG 685
>gi|118402073|ref|XP_001033356.1| hypothetical protein TTHERM_00421010 [Tetrahymena thermophila]
gi|89287704|gb|EAR85693.1| hypothetical protein TTHERM_00421010 [Tetrahymena thermophila
SB210]
Length = 203
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
G+ GPPGANLFI+H+P ++ D +L F +G V+SA+V + G SK FGF+SY P
Sbjct: 94 GKKHGPPGANLFIFHLPNDYRDSDLEKLFSEYGEVISARVNT-RPDGTSKGFGFISYNHP 152
Query: 294 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 324
+ A+ AI +NG Q+ K+LKV++K++ N
Sbjct: 153 SQAEAAITALNGLQIKNKRLKVEIKKEGMDN 183
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAING 57
LP + ++++ LFS YG + ++ TSKG F+ Y QA AA+ A+NG
Sbjct: 109 LPNDYRDSDLEKLFSEYGEVISARVNTRPDGTSKGFGFISYNHPSQAEAAITALNG 164
>gi|294873439|ref|XP_002766628.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239867660|gb|EEQ99345.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 372
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 60/293 (20%)
Query: 38 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNA 97
AF+++ ++ A+ A+ +NG+ ++EGS L VK AD R R
Sbjct: 122 AFVRFAEEKDAMRAISDVNGRVQVEGSQRMLEVKVADPSSSRGPTRR------------- 168
Query: 98 DSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQN--QPGFHGIIPPVNQGNA 155
P G PP + YG A Y P N G+ P+N +
Sbjct: 169 -----------PSGSLPPVSSYGSPAGNGYDHTPSVQPRFVNGMSQGYGQASTPLN--ST 215
Query: 156 MRGASP-DLSSNMGPRN--YAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGS 212
M G + S +G +AM + + + + PM +
Sbjct: 216 MAGDTQGQCSRTIGAWTEYFAMDGTPYYHNSQSNTVQWELPMEFK--------------- 260
Query: 213 VSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAK 272
+P+ A++ P Q +GP GAN+FI+ +P + + +L F FG ++SAK
Sbjct: 261 -NPSAAHTVP------------QAKGPAGANIFIFSVPDAWTEMDLRQHFGLFGNIVSAK 307
Query: 273 VFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL-GGKKLKVQLKRDNKQN 324
V VDK TG+S+ +GF+SY++ SA+ A+ M+G G+K+KVQ+K+ N
Sbjct: 308 VVVDKQTGISRGYGFISYDNCDSAERAVQTMDGYMAPTGRKIKVQIKKGEGSN 360
>gi|221483935|gb|EEE22239.1| RNA binding protein, putative [Toxoplasma gondii GT1]
gi|221505217|gb|EEE30871.1| RNA binding protein, putative [Toxoplasma gondii VEG]
Length = 837
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 64/93 (68%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G G Q GPPGAN+FI+HIP E+ + +L F +G V+SA++ D+ +G ++ FGFVS+
Sbjct: 481 GIGSQAHGPPGANVFIFHIPNEWSEHDLLTHFSVYGPVVSARIASDRLSGRNRGFGFVSF 540
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
+ +A A+ MNG Q+ GK+LKVQ+K+ +Q
Sbjct: 541 ANGQAAAAAVTAMNGFQVNGKRLKVQIKKGEEQ 573
>gi|269868277|gb|ACZ52443.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 372
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 29 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 88
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 89 MPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 122
>gi|269868273|gb|ACZ52441.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 373
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 30 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 89
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 90 MPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 123
>gi|428673462|gb|EKX74375.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 318
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
GG GPPGANLF++H+P + D +L F+ FG V+SA+V D A G ++ FGF+SY++
Sbjct: 189 GGSSFGPPGANLFVFHVPASWNDIDLIEHFKHFGTVISARVQRD-AAGRNRGFGFISYDN 247
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKR 319
P SA AI MNG +GGK LKVQLK+
Sbjct: 248 PQSALIAIKNMNGFSVGGKYLKVQLKK 274
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+P NV+E ++ S YG + L + + + G AF+ +E + A +EA+NGK
Sbjct: 20 IPTNVTEDQLKTELSKYGKLVSLFYMPDQGKQNNGWAFVTFEDNKSATTTIEALNGKIVF 79
Query: 62 EGSSVPLVVKWA 73
EGS L V +A
Sbjct: 80 EGSVQALEVVYA 91
>gi|389582424|dbj|GAB65162.1| clustered-asparagine-rich protein [Plasmodium cynomolgi strain B]
Length = 292
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P A + P+ + G T + GPPGAN+F++H+P + D EL FQ FG V+SA++
Sbjct: 129 PKEAVTTPAPVTQGKTNTVASF-GPPGANVFVFHLPSHWTDMELYQHFQHFGYVVSARIQ 187
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
D ++G +K +GFVS+ +P SA NAI M+G + GK LKVQLK+
Sbjct: 188 RD-SSGRNKGYGFVSFNNPESALNAIKGMHGFYVSGKHLKVQLKK 231
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PK+V+E E+ A S YGTI + + + Q+ +G AF+ Y+ + +A A+EA++ K
Sbjct: 14 IPKDVTEEELKAEASKYGTITQVYYVPATGQSPRGWAFITYKQRSEAYKAIEALDYKCIF 73
Query: 62 EGSSVPLVVKWA 73
S PL V++A
Sbjct: 74 PNSQRPLDVRFA 85
>gi|237836677|ref|XP_002367636.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|211965300|gb|EEB00496.1| RNA binding protein, putative [Toxoplasma gondii ME49]
Length = 685
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 64/93 (68%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G G Q GPPGAN+FI+HIP E+ + +L F +G V+SA++ D+ +G ++ FGFVS+
Sbjct: 481 GIGSQAHGPPGANVFIFHIPNEWSEHDLLTHFSVYGPVVSARIASDRLSGRNRGFGFVSF 540
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
+ +A A+ MNG Q+ GK+LKVQ+K+ +Q
Sbjct: 541 ANGQAAAAAVTAMNGFQVNGKRLKVQIKKGEEQ 573
>gi|269868275|gb|ACZ52442.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 372
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 29 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 88
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 89 MPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 122
>gi|401405877|ref|XP_003882388.1| putative RNA binding protein [Neospora caninum Liverpool]
gi|325116803|emb|CBZ52356.1| putative RNA binding protein [Neospora caninum Liverpool]
Length = 1060
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 64/93 (68%)
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
G G Q GPPGAN+FI+HIP E+ + +L F +G VLSA++ D+ +G ++ FGFVS+
Sbjct: 776 GFGSQEHGPPGANVFIFHIPNEWSEHDLLTHFSVYGPVLSARIASDRLSGRNRGFGFVSF 835
Query: 291 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
+ +A A+ MNG Q+ GK+LKVQ+K+ +Q
Sbjct: 836 ANGQAAAAAVTAMNGFQVNGKRLKVQIKKGEEQ 868
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ----------------QTSKGCAFLKYETK 45
LP ++ E + LF +G ++++ ++R Q ++ GCAF+++ K
Sbjct: 211 LPPDIKEDALRDLFERFGRVEEVFLMRDDQPLSGNHLGGGAAKPGKKSRTGCAFVRFAYK 270
Query: 46 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKA 87
E+AL A+ +NGK M GS + V++A E R + AQ A
Sbjct: 271 EEALFAIGELNGKFVMPGSQRAMEVRFA--ENRRSSSSAQGA 310
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
LP V+E + LFS +G I DL ++R + KGCAF++ ++ A A+ ++ +
Sbjct: 108 LPLTVTEEMLCTLFSQFGPIADLLLIRDRHTNAFKGCAFVRMQSITDADRAIRHLDSAYV 167
Query: 61 MEGSSVPLVVKWADTEKER 79
++ + L VK+A E ER
Sbjct: 168 LDPALGGLQVKYAVGEAER 186
>gi|269868239|gb|ACZ52424.1| Bruno-3 transcript variant 7 [Drosophila melanogaster]
Length = 362
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 30 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 89
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 90 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
>gi|330801309|ref|XP_003288671.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
gi|325081293|gb|EGC34814.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
Length = 348
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
+LFIY++P +GD+EL F +G V+S+KVF+DK T SKCFGFVSY++ SA AI
Sbjct: 268 DLFIYYLPFTYGDEELKQLFSPYGNVVSSKVFIDKNTQQSKCFGFVSYDNTQSAIQAIQE 327
Query: 303 MNGCQLGGKKLKVQLKRD 320
+NG + GKKLKV KR+
Sbjct: 328 LNGRAIEGKKLKVNFKRE 345
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 51/76 (67%)
Query: 7 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 66
E +V +F +G I++L ++R KG F+K+ T++++ AL ++ KH + GS++
Sbjct: 117 DEDQVRQIFGNFGIIEELTVVREKDGKPKGYGFIKFSTRDESENALRELDQKHTVPGSNL 176
Query: 67 PLVVKWADTEKERQAR 82
PL+VK+ADTE++++ +
Sbjct: 177 PLIVKFADTERQKRKK 192
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHK 60
+P +++E VS +F +G I D+ I++ + SKGCAF+ + TKE+A A+ +N +
Sbjct: 24 IPSSMNEEGVSNIFGKFGNIIDITIIKDKRTNVSKGCAFITFSTKEEADMAINTVNESNT 83
Query: 61 -MEGSSVPLVVKWADTEKERQARR 83
+E + PL VK++D E E+ R+
Sbjct: 84 FLENMNKPLQVKYSDNEIEKMERK 107
>gi|269868235|gb|ACZ52422.1| Bruno-3 transcript variant 4 [Drosophila melanogaster]
Length = 380
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G
Sbjct: 30 MLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQT 89
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 90 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
>gi|119621801|gb|EAX01396.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_c
[Homo sapiens]
Length = 328
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 1 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 61 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 90
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 258 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 297
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 298 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 328
>gi|157823331|ref|NP_001100870.1| CUGBP Elav-like family member 4 [Rattus norvegicus]
gi|149017097|gb|EDL76148.1| bruno-like 4, RNA binding protein (Drosophila) (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 329
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 1 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 61 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 90
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 259 EGPEGCNLLIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 298
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 299 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 329
>gi|340503171|gb|EGR29785.1| hypothetical protein IMG5_148660 [Ichthyophthirius multifiliis]
Length = 225
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
G+ GPPG+NLFI+H+P +F D +L F FG V+SA+V + G SK FGF+SY S
Sbjct: 124 GKKHGPPGSNLFIFHLPTDFRDSDLERLFGQFGEVISARVNT-RPDGTSKGFGFISYNSA 182
Query: 294 ASAQNAIAMMNGCQLGGKKLKVQLKRD 320
A++AI +NG QL K+LKV++K++
Sbjct: 183 KEAEDAINNLNGFQLKNKRLKVEIKKE 209
>gi|156097795|ref|XP_001614930.1| clustered-asparagine-rich protein [Plasmodium vivax Sal-1]
gi|148803804|gb|EDL45203.1| clustered-asparagine-rich protein, putative [Plasmodium vivax]
Length = 292
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P A + P+ + G T + GPPGAN+F++H+P + D EL FQ FG V+SA++
Sbjct: 129 PKEAVTTPAPTIQGKTNTVASF-GPPGANVFVFHLPSHWTDMELYQHFQHFGYVVSARIQ 187
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
D + G +K +GFVS+ +P SA NAI M+G + GK LKVQLK+
Sbjct: 188 RD-SNGRNKGYGFVSFNNPESALNAIKGMHGFYVSGKHLKVQLKK 231
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PK+V+E E+ A S YGTI + + + Q+ +G AF+ Y+ + +A A+EA++ K
Sbjct: 14 IPKDVTEEELKAEASKYGTITQVYYVPATGQSPRGWAFITYKQRSEAYKAIEALDYKCIF 73
Query: 62 EGSSVPLVVKWA 73
S PL V++A
Sbjct: 74 PNSQRPLDVRFA 85
>gi|348576693|ref|XP_003474121.1| PREDICTED: CUGBP Elav-like family member 4-like [Cavia porcellus]
Length = 477
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 149 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 208
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 209 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 238
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 407 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 446
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 447 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 477
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL ++ ++G
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLYCTRHSASVTTQVLLHGAPS 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 17/124 (13%)
Query: 219 NSNPSTSSSGGT-GSGGQIEG---PPG------------ANLFIYHIPQEFGDQELGNAF 262
N++ ST+ GG+ GS G + G PG LFI IP+ +++L F
Sbjct: 15 NASLSTNGLGGSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 74
Query: 263 QAFGRVLSAKVFVDKATGVSK-CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 321
+ FG++ V D+ TG+ K C AS + + L G +Q+K +
Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLYCTRHSASVTTQVLLHGAPSLPGMNRPIQVKPAD 134
Query: 322 KQNK 325
+++
Sbjct: 135 SESR 138
>gi|145306684|gb|ABP57106.1| CUG-BP and ETR-3-like factor 4 isoform 2 [Gallus gallus]
Length = 371
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 25 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 85 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
>gi|444523808|gb|ELV13628.1| CUGBP Elav-like family member 4 [Tupaia chinensis]
Length = 325
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 25 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 85 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
>gi|296222551|ref|XP_002757237.1| PREDICTED: CUGBP Elav-like family member 4-like [Callithrix
jacchus]
Length = 479
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 152 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 211
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 212 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 241
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 409 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 448
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 479
>gi|332849799|ref|XP_512100.3| PREDICTED: CUGBP, Elav-like family member 4 [Pan troglodytes]
gi|194379036|dbj|BAG58069.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 147 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 206
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 207 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 236
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG
Sbjct: 404 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG 453
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|291327533|ref|NP_001167545.1| CUGBP Elav-like family member 4 isoform F [Mus musculus]
gi|26341974|dbj|BAC34649.1| unnamed protein product [Mus musculus]
Length = 456
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|387542962|gb|AFJ72108.1| CUGBP Elav-like family member 4 isoform 1 [Macaca mulatta]
Length = 486
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 52/91 (57%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 486
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAIKAQTALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMARPIQVKPADSE 136
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 302
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y + SA A A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAIKAQTAL 115
Query: 303 MNGCQLGGKKLKVQLKRDNKQNK 325
L G +Q+K + +++
Sbjct: 116 HEQKTLPGMARPIQVKPADSESR 138
>gi|328722643|ref|XP_001943968.2| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Acyrthosiphon pisum]
Length = 389
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +SE ++ +F +G I++ +LR SKGCAF+ Y TK+ A+AA++ ++
Sbjct: 14 MLSKKISEPDIRLMFEPFGAIEECSVLRDPNGVSKGCAFVTYTTKQNAIAAIKGMHHSQT 73
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQS 89
MEG + PLVVK+ADT+KE+ +R Q+ Q+
Sbjct: 74 MEGCTCPLVVKFADTQKEKDQKRMQQMQA 102
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 287 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
FVSY++ SAQ AI MN Q+G K+LKVQLKR + ++PY
Sbjct: 349 FVSYDNAYSAQAAIQTMNSYQVGNKRLKVQLKRPKEASRPY 389
>gi|226371657|ref|NP_573458.2| CUGBP Elav-like family member 4 isoform D [Mus musculus]
Length = 484
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 157 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 216
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 217 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 246
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 414 EGPEGCNLLIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 453
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 454 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|66825827|ref|XP_646268.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60474730|gb|EAL72667.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 368
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
+LFIY++P +GD+EL F +G V+S+KVF+DK T SKCFGFVSY++ SA AI
Sbjct: 288 DLFIYYLPFTYGDEELKQLFAPYGNVISSKVFIDKNTQQSKCFGFVSYDNTQSAIAAIQE 347
Query: 303 MNGCQLGGKKLKVQLKRD 320
+NG + GKKLKV KR+
Sbjct: 348 LNGRAIEGKKLKVNFKRE 365
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%)
Query: 7 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 66
E ++ LF YG I+DL I+R KG F+KY T++++ AL I+GKH + GS++
Sbjct: 118 DEDQIRILFGNYGIIEDLNIVREKDGKPKGYGFIKYSTRDESENALREIDGKHTLPGSNL 177
Query: 67 PLVVKWADTEKERQAR 82
P++VK+ADTE++++ +
Sbjct: 178 PIIVKFADTERQKRKK 193
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHK 60
+P +++E VS +F+ +G I D+ I++ + SKGCAF+ + TKE+A AL N
Sbjct: 25 IPSSMNEEGVSQIFNKFGNILDITIIKDKRTNVSKGCAFITFSTKEEADNALNTTNESGT 84
Query: 61 -MEGSSVPLVVKWADTEKERQARR 83
+E + PL VK++D E E+ R+
Sbjct: 85 FLENMNKPLQVKYSDNEIEKMERK 108
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G +F+ HIP ++ + F FG +L + DK T VSK F+++ + A NA+
Sbjct: 17 GFTVFVGHIPSSMNEEGVSQIFNKFGNILDITIIKDKRTNVSKGCAFITFSTKEEADNAL 76
Query: 301 AMMN 304
N
Sbjct: 77 NTTN 80
>gi|363744106|ref|XP_003642975.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 445
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 146 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 206 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 235
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 119 LPGMNRPIQVKPADSESRGEDRK 141
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|226371661|ref|NP_001139765.1| CUGBP Elav-like family member 4 isoform B [Mus musculus]
gi|30931371|gb|AAH52744.1| Bruno-like 4, RNA binding protein (Drosophila) [Mus musculus]
Length = 485
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 415 EGPEGCNLLIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 454
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 455 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 485
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|26339326|dbj|BAC33334.1| unnamed protein product [Mus musculus]
Length = 484
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 157 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 216
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 217 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 246
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 414 EGPEGCNLLIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 453
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKV+LKR N+PY
Sbjct: 454 QTAIQAMNGFQIGMKRLKVRLKRPKDANRPY 484
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|145306682|gb|ABP57105.1| CUG-BP and ETR-3-like factor 4 isoform 1 [Gallus gallus]
Length = 351
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 25 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 85 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 281 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 320
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N PY
Sbjct: 321 QAAIQAMNGFQIGMKRLKVQLKRPKDANHPY 351
>gi|75075903|sp|Q4R535.1|CELF4_MACFA RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|67970896|dbj|BAE01790.1| unnamed protein product [Macaca fascicularis]
Length = 474
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 147 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 206
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 207 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 236
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 404 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 443
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 444 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 474
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|33872777|gb|AAH04167.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
gi|37515278|gb|AAH01946.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
Length = 484
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 157 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 216
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 217 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 246
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 414 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 453
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 454 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|187761301|ref|NP_001020259.1| CUGBP Elav-like family member 4 isoform 3 [Homo sapiens]
Length = 484
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 157 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 216
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 217 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 246
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 414 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 453
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 454 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|389584459|dbj|GAB67191.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 567
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%)
Query: 205 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQA 264
PL NSP + + ++N S GPPGANLFI+H+P E+ +L AF
Sbjct: 389 PLGNSPVRMFISFVHANLGIRYFFFPSSRSSFAGPPGANLFIFHVPNEWHQTDLIQAFSP 448
Query: 265 FGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 317
FG +LSA++ +K+TG ++ F FVSYES SA AI+ MNG KKLKV +
Sbjct: 449 FGELLSARIATEKSTGRNRGFAFVSYESIESAAAAISQMNGFMALNKKLKVTV 501
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPK+++E V +FS YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK
Sbjct: 194 LPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKT 253
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+EG + P+ V++A+ + +Q +
Sbjct: 254 LEGCARPVEVRFAEPKSAKQTQ 275
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LFI +P+ ++++ F+ FG V + DK T + K FV S + A N
Sbjct: 85 PVSIKLFIGRVPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADN 144
Query: 299 AIAMMNGC-----QLGGKKLK 314
AI +N QLG ++K
Sbjct: 145 AIRSLNNQRTLDPQLGSLQVK 165
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK++ E +V +F +G +K++ I+R K AF+K + +A A+ ++N +
Sbjct: 95 VPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIRSLNNQRT 154
Query: 61 MEGSSVPLVVKWADTE 76
++ L VK+A E
Sbjct: 155 LDPQLGSLQVKYASGE 170
>gi|148664595|gb|EDK97011.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 463
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 164 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 223
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 224 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 253
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 67 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 126
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 127 LPGMNRPIQVKPADSE 142
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 62 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 121
>gi|344269050|ref|XP_003406368.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 2
[Loxodonta africana]
Length = 486
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 212 SVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 271
S SP A S S G S ++ LFI IP+ +++L F+ FG++
Sbjct: 24 SSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYEL 83
Query: 272 KVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
V D+ TG+ K F++Y ES AQ+A+
Sbjct: 84 TVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|403220835|dbj|BAM38968.1| ribonucleoprotein [Theileria orientalis strain Shintoku]
Length = 604
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 56/324 (17%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT-SKGCAFLKYETKEQALAALEAINGKHK 60
LP++ SE ++ LF YG + +++ +KGC F++ KEQAL A+ ++ K
Sbjct: 194 LPRSFSEQDLQDLFKDYGDAVETFLMKDMNSGGNKGCGFVRMRYKEQALYAIRELDHKKM 253
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL-----PMGYAPP 115
++ D+ K + R AQ NA Q P L + P+ P
Sbjct: 254 VK-----------DSVKPIEVRFAQSK--------NAAPQDPRLMQRIKRPPPPLDGIFP 294
Query: 116 YNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP 175
G G +G YG ++ R + G N GN + R Y P
Sbjct: 295 NYGPGGNFNGGYGKLKKR-----KKNGASLGYMSYNNGNPRHAGAW--------REYISP 341
Query: 176 PSGF----VGSGYPAVPGLQYPMPYPGGML-GHRPLNNSPGSVSPAVANSNPSTSSSGGT 230
F V +G Q+ +P L GH + A A NP++S
Sbjct: 342 DGRFYYFNVETG-----STQWEVPRDFLKLSGHGAGFGGYNNGGYAPA-GNPASSPGFNA 395
Query: 231 GSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
+ LF++HIP ++ + +L F FGRV+ AK+ D+AT SK + FVSY
Sbjct: 396 VTDDSC-------LFVFHIPSQWNNSDLFRTFSPFGRVVKAKIVFDRATNRSKGYAFVSY 448
Query: 291 ESPASAQNAIAMMNGCQLGGKKLK 314
++P SA A+A MNG + GKKLK
Sbjct: 449 DNPDSATQAVANMNGFSILGKKLK 472
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P++ E ++ LF +GT++D+ I++ + K CAF+K + QA AA+ ++N +H
Sbjct: 94 IPRDHKEEDIRKLFEEFGTVEDVTIIKDKATNVPKNCAFVKMASICQADAAIRSLNNQHT 153
Query: 61 MEGSSVPLVVKWADTEKER 79
+E + +++A E ER
Sbjct: 154 VEPGLGAVQIRYATGEPER 172
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LFI IP++ ++++ F+ FG V + DKAT V K FV S A
Sbjct: 84 PASIKLFIARIPRDHKEEDIRKLFEEFGTVEDVTIIKDKATNVPKNCAFVKMASICQADA 143
Query: 299 AIAMMN 304
AI +N
Sbjct: 144 AIRSLN 149
>gi|95007487|emb|CAJ20709.1| RNA binding protein, putative [Toxoplasma gondii RH]
gi|221480877|gb|EEE19298.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221501598|gb|EEE27368.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 475
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGPPGAN+F++H+P E+ +L F FG V+SA+V D+ TG ++ F FVSY++ SA
Sbjct: 340 EGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDNVESA 399
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
A+ MNG GGK+LKV +K+ +Q
Sbjct: 400 ATAVNNMNGFMAGGKRLKVSVKKGEEQ 426
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ ++E EV FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH
Sbjct: 144 IPRTMTEEEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHT 203
Query: 61 MEGSSVPLVVKWADTEKER 79
EG + P+ V++A+++ R
Sbjct: 204 FEGCTRPVEVRFAESKAAR 222
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF+ +PQ D L F+ FG V A + DKATG K F+ +S A+A AI +
Sbjct: 39 LFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIRGL 98
Query: 304 NGCQL 308
N ++
Sbjct: 99 NSTRI 103
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ +A + +F +G +K+ I+R K AF+K ++ A AA+ +N
Sbjct: 44 VPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIRGLNSTRI 103
Query: 61 MEGSSVPLVVKWADTEKER 79
+E S P+ VK+A E E+
Sbjct: 104 LEQSMGPITVKYATGEAEK 122
>gi|428162997|gb|EKX32093.1| hypothetical protein GUITHDRAFT_53946, partial [Guillardia theta
CCMP2712]
Length = 75
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 51/71 (71%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLFIYHIP +GD ++ F FG V+SA VF D+AT SK FGFVSY++P SA
Sbjct: 4 GPPGANLFIYHIPTSWGDADMRQCFAPFGNVISATVFKDRATFQSKGFGFVSYDNPMSAN 63
Query: 298 NAIAMMNGCQL 308
AI MNG Q+
Sbjct: 64 AAITAMNGMQV 74
>gi|395822986|ref|XP_003784782.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Otolemur
garnettii]
Length = 486
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|237844787|ref|XP_002371691.1| CELF family protein, putative [Toxoplasma gondii ME49]
gi|211969355|gb|EEB04551.1| CELF family protein, putative [Toxoplasma gondii ME49]
Length = 475
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGPPGAN+F++H+P E+ +L F FG V+SA+V D+ TG ++ F FVSY++ SA
Sbjct: 340 EGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDNVESA 399
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
A+ MNG GGK+LKV +K+ +Q
Sbjct: 400 ATAVNNMNGFMAGGKRLKVSVKKGEEQ 426
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ ++E EV FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH
Sbjct: 144 IPRTMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHT 203
Query: 61 MEGSSVPLVVKWADTEKER 79
EG + P+ V++A+++ R
Sbjct: 204 FEGCTRPVEVRFAESKAAR 222
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF+ +PQ D L F+ FG V A + DKATG K F+ +S A+A AI +
Sbjct: 39 LFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIRGL 98
Query: 304 NGCQL 308
N ++
Sbjct: 99 NSTRI 103
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ +A + +F +G +K+ I+R K AF+K ++ A AA+ +N
Sbjct: 44 VPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIRGLNSTRI 103
Query: 61 MEGSSVPLVVKWADTEKER 79
+E S P+ VK+A E E+
Sbjct: 104 LEQSMGPITVKYATGEAEK 122
>gi|207080190|ref|NP_001128833.1| CUGBP Elav-like family member 4 isoform 2 [Pongo abelii]
gi|55730138|emb|CAH91793.1| hypothetical protein [Pongo abelii]
Length = 456
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 157 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 216
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 217 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 246
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|13123778|ref|NP_064565.1| CUGBP Elav-like family member 4 isoform 1 [Homo sapiens]
gi|397520308|ref|XP_003830262.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Pan paniscus]
gi|403265036|ref|XP_003924762.1| PREDICTED: CUGBP Elav-like family member 4 [Saimiri boliviensis
boliviensis]
gi|426385818|ref|XP_004059398.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Gorilla
gorilla gorilla]
gi|74761348|sp|Q9BZC1.1|CELF4_HUMAN RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|152013395|sp|Q5NVC8.2|CELF4_PONAB RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|12746394|gb|AAK07475.1|AF329265_1 CUG-BP and ETR-3 like factor 4 [Homo sapiens]
gi|119621802|gb|EAX01397.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Homo
sapiens]
Length = 486
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|395822988|ref|XP_003784783.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Otolemur
garnettii]
Length = 448
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 148 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 207
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 208 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 237
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 121 LPGMNRPIQVKPADSESRGEDRK 143
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|118103587|ref|XP_001231325.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 2 [Gallus
gallus]
Length = 483
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 156 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 216 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 245
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 413 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 452
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 453 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 483
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 119 LPGMNRPIQVKPADSE 134
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|291394300|ref|XP_002713553.1| PREDICTED: bruno-like 4, RNA binding protein-like [Oryctolagus
cuniculus]
Length = 485
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 415 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 454
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 455 QTAIQAMNGFQIGMKRLKVQLKRPKDTNRPY 485
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 219 NSNPSTSSSGGT-GSGGQIEG---PPG------------ANLFIYHIPQEFGDQELGNAF 262
N++ ST+ GG+ GS G + G PG LFI IP+ +++L F
Sbjct: 15 NASLSTNGLGGSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 74
Query: 263 QAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|148664597|gb|EDK97013.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Mus
musculus]
Length = 491
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 164 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 223
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 224 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 253
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 421 EGPEGCNLLIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 460
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 67 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 126
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 127 LPGMNRPIQVKPADSE 142
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 62 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 121
>gi|440911412|gb|ELR61086.1| CUGBP Elav-like family member 4 [Bos grunniens mutus]
Length = 487
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 159 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 218
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 219 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 248
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 417 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 456
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 457 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 487
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ K
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHADEK 120
Query: 61 -MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 HLGGMNRPIQVKPADSE 137
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNK 325
+ LGG +Q+K + +++
Sbjct: 116 -HADEKHLGGMNRPIQVKPADSESR 139
>gi|187761299|ref|NP_001020258.1| CUGBP Elav-like family member 4 isoform 2 [Homo sapiens]
Length = 485
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 415 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 454
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 455 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 485
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|148664594|gb|EDK97010.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 485
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 157 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 216
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 217 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 246
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 415 EGPEGCNLLIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 454
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 455 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 485
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|441603563|ref|XP_003262134.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Nomascus leucogenys]
Length = 458
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 157 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 216
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 217 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 246
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGC+FL Y +EQA +A + HK
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCSFLSYCQREQA----KAHSDMHK 116
Query: 61 ME---GSSVPLVVKWADTE 76
E + P+ VK AD+E
Sbjct: 117 QEVLPXMNRPIQVKPADSE 135
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 290
LFI IP+ +++L F+ FG++ V D+ TG+ K F+SY
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCSFLSY 102
>gi|410977611|ref|XP_003995197.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Felis catus]
Length = 482
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCF
Sbjct: 405 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFXXXXXXXXX-- 462
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+G K+LKVQLKR N+PY
Sbjct: 463 -----------IGMKRLKVQLKRPKDANRPY 482
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 149 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 208
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 209 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 238
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCA L + ++ AL + A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCALLSFCARDAALKSQTALHRQEV 120
Query: 61 MEGSSVPLVVKWADTE 76
+ + P+ VK AD+E
Sbjct: 121 LPXMNRPIQVKPADSE 136
>gi|152013394|sp|Q7TSY6.2|CELF4_MOUSE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
Length = 486
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLLIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|432858764|ref|XP_004068927.1| PREDICTED: CUGBP Elav-like family member 4-like [Oryzias latipes]
Length = 505
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G+I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 145 MLNKQQSEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQT 204
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 205 MPGASSSLVVKFADTDKERTIRRMQQMAGQ 234
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++P SA
Sbjct: 435 EGPEGCNLFIYHLPQEFGDGELMQMFLPFG--------------------FVSFDNPGSA 474
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 475 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 505
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 58 IPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNALHEQKT 117
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 118 LPGMNRPIQVKPADSESRGEDRK 140
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 53 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNAL 112
>gi|281350688|gb|EFB26272.1| hypothetical protein PANDA_008623 [Ailuropoda melanoleuca]
Length = 245
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G
Sbjct: 35 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINSLHGSQT 94
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 95 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 124
>gi|149944693|ref|NP_001092538.1| CUGBP Elav-like family member 4 [Bos taurus]
gi|148878073|gb|AAI46143.1| BRUNOL4 protein [Bos taurus]
gi|296473867|tpg|DAA15982.1| TPA: CUG-BP- and ETR-3-like factor 4 [Bos taurus]
Length = 475
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 147 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 206
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 207 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 236
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 405 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 444
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 445 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 475
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|401397143|ref|XP_003879991.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
gi|325114399|emb|CBZ49956.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
Length = 475
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGPPGAN+F++H+P E+ +L F FG V+SA+V D+ TG ++ F FVSY++ SA
Sbjct: 340 EGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDNVESA 399
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
A+ MNG GGK+LKV +K+ +Q
Sbjct: 400 ATAVNNMNGFMAGGKRLKVSVKKGEEQ 426
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ ++E EV FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH
Sbjct: 144 IPRMMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHT 203
Query: 61 MEGSSVPLVVKWADTEKERQ 80
EG S P+ V++A+++ RQ
Sbjct: 204 FEGCSRPVEVRFAESKAARQ 223
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF+ +PQ D L F+ FG V A + DKATG K FV S A+A AI +
Sbjct: 39 LFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAAIRGL 98
Query: 304 NGCQL 308
N ++
Sbjct: 99 NSTRI 103
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ +A + +F +G +K+ I+R K AF+K + A AA+ +N
Sbjct: 44 VPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAAIRGLNSTRI 103
Query: 61 MEGSSVPLVVKWADTEKER 79
+E S P+ VK+A E E+
Sbjct: 104 LEQSMGPITVKYATGEAEK 122
>gi|195578727|ref|XP_002079215.1| GD23833 [Drosophila simulans]
gi|194191224|gb|EDX04800.1| GD23833 [Drosophila simulans]
Length = 245
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 117 NG 118
G
Sbjct: 121 AG 122
>gi|363744101|ref|XP_003642973.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 472
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 146 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 206 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 235
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 402 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 441
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 442 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 472
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 119 LPGMNRPIQVKPADSESRGEDRK 141
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 207 NNSPGSVSPAVANSNPSTS-------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELG 259
N P + S + +SNPST+ S G S ++ LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|207028397|ref|NP_001128708.1| CUGBP, Elav-like family member 4 [Xenopus laevis]
gi|197359136|gb|ACH69784.1| RNA binding protein Bruno-like 4 [Xenopus laevis]
Length = 471
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 146 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 206 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 235
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 401 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 440
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 441 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 471
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 59 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 118
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 119 LPGMNRPIQVKPADSESRGEDRK 141
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 207 NNSPGSVSPAVANSNPSTS---------SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQE 257
N P + S V SNPS++ S GG S ++ LFI IP+ +++
Sbjct: 10 NGQPDNSSLTV--SNPSSNGHMNGLNHHSPGGAASTIPMKDHDAIKLFIGQIPRNLDEKD 67
Query: 258 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 68 LKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|341875924|gb|EGT31859.1| hypothetical protein CAEBREN_30063 [Caenorhabditis brenneri]
Length = 382
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF+ +G + ++ +LRG+ SKGCAF+KY++ A A+ A++G
Sbjct: 32 MLSKTQSEDDVRTLFAAFGELDEVTVLRGADGVSKGCAFVKYKSGFDAHMAISALHGSQT 91
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADTE+ERQ RR Q+ +Q
Sbjct: 92 MPGASSSLVVKYADTERERQNRRMQQMAAQ 121
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
++ GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCF
Sbjct: 331 EVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHVVSAKVFVDRATNQSKCF 381
>gi|297275215|ref|XP_001106276.2| PREDICTED: CUGBP Elav-like family member 4-like [Macaca mulatta]
Length = 438
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 131 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 190
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 191 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 220
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG
Sbjct: 388 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG 437
>gi|395510718|ref|XP_003759619.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 453
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 147 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHVEAQAAINALHGSQT 206
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 207 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 236
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG
Sbjct: 403 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG 452
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 60 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 119
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 120 LPGMNRPIQVKPADSESRGEDRK 142
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 18/100 (18%)
Query: 219 NSNPSTSSSGGTGSGGQIEG---PPG------------ANLFIYHIPQEFGDQELGNAFQ 263
N++ S +S G GS G + G PG LFI IP+ +++L F+
Sbjct: 15 NTSLSNNSHGSPGSNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFE 74
Query: 264 AFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 75 EFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 114
>gi|62089134|dbj|BAD93011.1| bruno-like 4, RNA binding protein variant [Homo sapiens]
Length = 510
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 440 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 479
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 480 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 510
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 183 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 242
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 243 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 272
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 86 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 145
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 146 LPGMNRPIQVKPADSE 161
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 81 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 140
>gi|56403901|emb|CAI29735.1| hypothetical protein [Pongo abelii]
Length = 486
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LV K+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVAKFADTDKERTMRRMQQMAGQ 247
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|22760138|dbj|BAC11082.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 157 MLNKQQSEEDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGGQT 216
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 217 MPGASSSLVVKFADTDKERMMRRMQQMAGQ 246
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 414 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 453
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 454 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGRIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|402903006|ref|XP_003914376.1| PREDICTED: CUGBP Elav-like family member 4-like [Papio anubis]
Length = 500
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 430 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 469
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 470 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 500
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 173 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 232
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 233 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 262
>gi|19921186|ref|NP_609559.1| bruno-2, isoform A [Drosophila melanogaster]
gi|17862264|gb|AAL39609.1| LD19052p [Drosophila melanogaster]
gi|22946323|gb|AAF53181.2| bruno-2, isoform A [Drosophila melanogaster]
gi|220943144|gb|ACL84115.1| bru-2-PA [synthetic construct]
Length = 632
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 388 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 447
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 448 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 507
Query: 117 NG 118
G
Sbjct: 508 AG 509
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E + +F +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 302 IPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 361
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 362 LDGMHHPIQMKPADSENRNERK 383
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 236 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 286 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYT 345
Query: 293 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
+A A A+ N L G +Q+K + +N+
Sbjct: 346 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 379
>gi|426379623|ref|XP_004056491.1| PREDICTED: CUGBP Elav-like family member 6 isoform 4 [Gorilla
gorilla gorilla]
Length = 463
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 54/93 (58%), Gaps = 20/93 (21%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG FVS+++P
Sbjct: 391 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFG--------------------FVSFDNPT 430
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 431 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 463
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQ 225
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
>gi|124512318|ref|XP_001349292.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23499061|emb|CAD51141.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 286
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGAN+F++H+P + D EL FQ FG V+SA++ D A G +K +GFVS+ +P SA
Sbjct: 146 GPPGANVFVFHLPSHWTDMELYQHFQHFGYVVSARIQRD-ANGRNKGYGFVSFNNPESAL 204
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
NAI M+G + GK LKVQLK+
Sbjct: 205 NAIKGMHGFYVSGKHLKVQLKK 226
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PK+V+E E+ + YGTI + + + Q+ +G AF+ YE + +A A+EA++ K
Sbjct: 14 IPKDVTEEELKTEAAKYGTITQVYYVPATAQSPRGWAFITYEQRSEAYKAIEALDYKCIF 73
Query: 62 EGSSVPLVVKWA 73
S PL V++A
Sbjct: 74 PNSQRPLDVRFA 85
>gi|386769531|ref|NP_001246000.1| bruno-2, isoform G [Drosophila melanogaster]
gi|442627595|ref|NP_723742.2| bruno-2, isoform M [Drosophila melanogaster]
gi|383291458|gb|AFH03674.1| bruno-2, isoform G [Drosophila melanogaster]
gi|440213742|gb|AAF53180.4| bruno-2, isoform M [Drosophila melanogaster]
Length = 664
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 388 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 447
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 448 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 507
Query: 117 NG 118
G
Sbjct: 508 AG 509
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E + +F +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 302 IPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 361
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 362 LDGMHHPIQMKPADSENRNERK 383
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 236 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 286 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYT 345
Query: 293 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
+A A A+ N L G +Q+K + +N+
Sbjct: 346 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 379
>gi|195351037|ref|XP_002042043.1| GM26785 [Drosophila sechellia]
gi|194123867|gb|EDW45910.1| GM26785 [Drosophila sechellia]
Length = 644
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 400 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 459
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 116
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 460 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 519
Query: 117 NG 118
G
Sbjct: 520 AG 521
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E + +F +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 314 IPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 373
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 374 LDGMHHPIQMKPADSENRNERK 395
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 236 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 298 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYT 357
Query: 293 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
+A A A+ N L G +Q+K + +N+
Sbjct: 358 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 391
>gi|118404110|ref|NP_001072378.1| CUGBP Elav-like family member 4 [Xenopus (Silurana) tropicalis]
gi|123914769|sp|Q0V9L3.1|CELF4_XENTR RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|111305714|gb|AAI21491.1| bruno-like 4, RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 424
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 354 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 393
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 394 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 424
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 16 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 75
++ G + +Q+ ++ GCAF+KY + +A AA+ A++G M G+S LVVK+ADT
Sbjct: 113 TLPGMNRPIQVKPADSESRGGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADT 172
Query: 76 EKERQARRAQKAQSQ 90
+KER RR Q+ Q
Sbjct: 173 DKERTMRRMQQMAGQ 187
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 17/101 (16%)
Query: 217 VANSNPSTSSSGGTGSG---GQIEGPPGA-----------NLFIYHIPQEFGDQELGNAF 262
VAN P SS +G G P GA LFI IP+ +++L F
Sbjct: 8 VANGQPDNSSLSSNPTGHMNGLTHSPGGAATIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 67
Query: 263 QAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 68 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 108
>gi|9246977|gb|AAF86232.1|AF248650_1 RNA-binding protein BRUNOL4 [Homo sapiens]
Length = 294
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 148 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 207
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 208 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 237
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 121 LPGMNRPIQVKPADSESRGEDRK 143
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|9246979|gb|AAF86233.1|AF248651_1 RNA-binding protein BRUNOL4 [Homo sapiens]
Length = 163
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 93 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 132
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 133 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 163
>gi|301769063|ref|XP_002919950.1| PREDICTED: CUGBP Elav-like family member 4-like [Ailuropoda
melanoleuca]
Length = 463
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINSLHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
EGP + FIYH+PQEFGD EL F FG V+S+KVFVD+AT S
Sbjct: 416 EGPLSLSSFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQS 461
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|327283376|ref|XP_003226417.1| PREDICTED: CUGBP Elav-like family member 4-like, partial [Anolis
carolinensis]
Length = 219
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FGFVS+++PASA
Sbjct: 149 EGPEGCNLFIYHLPQEFGDAELMQMF--------------------LPFGFVSFDNPASA 188
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 189 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 219
>gi|26350575|dbj|BAC38924.1| unnamed protein product [Mus musculus]
Length = 148
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 11/125 (8%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 26 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 85
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 86 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAYA 134
Query: 121 YQASG 125
SG
Sbjct: 135 QAVSG 139
>gi|237832459|ref|XP_002365527.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|211963191|gb|EEA98386.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|221487976|gb|EEE26190.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii GT1]
gi|221508501|gb|EEE34070.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 648
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 58/90 (64%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
+ GPPGAN+F++HIP E+ +L F FG ++S + VDKA+ ++ F FVSY++
Sbjct: 401 ETAGPPGANVFVFHIPNEWTKADLVQTFSGFGNIVSCHIAVDKASHRNRGFAFVSYDNIQ 460
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 324
SA NA+ MNGC + K+L V +K+ + +
Sbjct: 461 SAANAVNHMNGCLVANKRLNVSIKKGEEHH 490
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +SE E+ F YGT++++ +++ S T KGCAF+K++ KE+ L A+ +NGKH
Sbjct: 212 IPRTMSEDELRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHV 271
Query: 61 MEGSSVPLVVKWADTEKERQARRA 84
+ + P+ V++A+++ +RQ + A
Sbjct: 272 FDECTRPVEVRFAESKSQRQQQMA 295
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P V E + +F +G ++++ ++R S + AF+K + A A + A++
Sbjct: 109 VPHTVDEEALRPIFESFGEVREVFVIRDKSTLKHRNSAFVKMASLAAADACIRALHSNRV 168
Query: 61 MEGSSVPLVVKWADTEKER 79
++ + P++VK+A E ER
Sbjct: 169 LDAALGPIIVKYATGEAER 187
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
A LF+ IP+ + EL FQ +G V V D ATG K FV ++ +A+
Sbjct: 205 AKLFVGSIPRTMSEDELRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMR 264
Query: 302 MMNG 305
+NG
Sbjct: 265 NLNG 268
>gi|351694709|gb|EHA97627.1| CUG-BP- and ETR-3-like factor 5, partial [Heterocephalus glaber]
Length = 300
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 69/120 (57%), Gaps = 11/120 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 54 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 113
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL ALP PY+ Y
Sbjct: 114 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--ALPFS---PYSAYA 162
>gi|195117928|ref|XP_002003497.1| GI17946 [Drosophila mojavensis]
gi|193914072|gb|EDW12939.1| GI17946 [Drosophila mojavensis]
Length = 580
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 62/89 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 349 MLNKKYTEADVRQLFTGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQT 408
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQS 89
MEG S PLVVK+ADT+KE+ ++ Q+ Q+
Sbjct: 409 MEGCSAPLVVKFADTQKEKDQKKMQQLQA 437
>gi|194761396|ref|XP_001962915.1| GF19660 [Drosophila ananassae]
gi|190616612|gb|EDV32136.1| GF19660 [Drosophila ananassae]
Length = 215
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
MEG S PLVVK+ADT+KE+ ++ Q+
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQ 86
>gi|156101369|ref|XP_001616378.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148805252|gb|EDL46651.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 513
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLFI+H+P E+ +L AF FG +LSA++ +K+TG ++ F FVSYES SA
Sbjct: 368 GPPGANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAA 427
Query: 298 NAIAMMNGCQLGGKKLKVQL 317
AI+ MNG KKLKV +
Sbjct: 428 AAISQMNGFMALNKKLKVTV 447
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPK+++E V +FS YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK
Sbjct: 194 LPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKT 253
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
+EG + P+ V++A+ + +Q +
Sbjct: 254 LEGCARPVEVRFAEPKSAKQTQ 275
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LFI +P+ +++L F+ FG V + DK T + K FV S + A N
Sbjct: 85 PVSIKLFIGRVPKTMEEEQLRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADN 144
Query: 299 AIAMMNGC-----QLGGKKLK 314
AI +N QLG ++K
Sbjct: 145 AIRSLNNQRTLDPQLGSLQVK 165
>gi|148699458|gb|EDL31405.1| mCG145499 [Mus musculus]
Length = 376
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 59/94 (62%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 83 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 142
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 143 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL 176
>gi|194861277|ref|XP_001969747.1| GG23780 [Drosophila erecta]
gi|190661614|gb|EDV58806.1| GG23780 [Drosophila erecta]
Length = 646
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 61/89 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 404 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 463
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQS 89
MEG S PLVVK+ADT+KE+ ++ Q+ +
Sbjct: 464 MEGCSAPLVVKFADTQKEKDQKKMQQIHA 492
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E + +F +G + L +LR S+GC F+ Y T++ AL A +A++
Sbjct: 318 IPKTWDETRLRQMFEQFGAVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKT 377
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++G P+ +K AD+E + +
Sbjct: 378 LDGMHHPIQMKPADSENRNERK 399
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 236 IEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
I+ P A+ +F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y +
Sbjct: 302 IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGAVHTLNVLRDKVTSISRGCCFVTYYT 361
Query: 293 PASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
+A A A+ N L G +Q+K + +N+
Sbjct: 362 RKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 395
>gi|426386616|ref|XP_004059779.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Gorilla
gorilla gorilla]
gi|194376596|dbj|BAG57444.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 11/120 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 26 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 85
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 86 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAYA 134
>gi|149034410|gb|EDL89147.1| similar to bruno-like 5, RNA binding protein (predicted) [Rattus
norvegicus]
Length = 319
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 59/94 (62%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 26 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 85
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 86 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL 119
>gi|403296214|ref|XP_003939012.1| PREDICTED: CUGBP Elav-like family member 5 [Saimiri boliviensis
boliviensis]
Length = 363
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 11/120 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 66 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 125
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 126 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAYA 174
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 286 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
GFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 322 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 363
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 28 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 83
RG+Q GCAFL Y ++ A+ A A++ + + G + P+ VK AD+E R+
Sbjct: 6 RGAQWLVHGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRK 61
>gi|71032751|ref|XP_766017.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352974|gb|EAN33734.1| RNA-binding protein, putative [Theileria parva]
Length = 539
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI+HIP ++ + +L F FGRV+ A++ +D++T SK + FVSY++P SA A+A M
Sbjct: 456 LFIFHIPPQWNNNDLFRTFSPFGRVVQARIAIDRSTNRSKGYAFVSYDNPESATQAVANM 515
Query: 304 NGCQLGGKKLKVQLKRDNKQNKPY 327
NG + GKKL+V K N ++ PY
Sbjct: 516 NGFTIMGKKLRVNYKTTNNRSNPY 539
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 12/95 (12%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPK+++E ++++LF +G ++ +L+ + +KGC F+K + KEQAL A++ +NGK
Sbjct: 244 LPKSLTEDDLASLFKDFGEPLEVFVLKDLTCGGNKGCGFVKMKYKEQALYAIKELNGKKM 303
Query: 61 MEGSSVPLVVKWA-----------DTEKERQARRA 84
+EGS PL V++A D E R+ RA
Sbjct: 304 LEGSIRPLEVRFAMNKTGVSGQAQDFESRRKRSRA 338
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+PK E+++ LF +G +KD+ ++R S K CAF+K + QA AA+ +N +
Sbjct: 144 IPKTYEESDLRRLFQEFGPVKDVIVIRDKVTNSHKNCAFVKMASICQADAAVRRLNNQRV 203
Query: 61 MEGSSVPLVVKWADTEKER 79
++ S + +++A E ER
Sbjct: 204 IDSSLGAVQIRYATGEVER 222
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF+ IP+ + + +L FQ FG V V DK T K FV S A A+ +
Sbjct: 139 LFVARIPKTYEESDLRRLFQEFGPVKDVIVIRDKVTNSHKNCAFVKMASICQADAAVRRL 198
Query: 304 NGCQLGGKKL-KVQLK 318
N ++ L VQ++
Sbjct: 199 NNQRVIDSSLGAVQIR 214
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 235 QIEGPPG---ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
Q+ G PG A LF+ +P+ + +L + F+ FG L V D G +K GFV +
Sbjct: 227 QMAGEPGMDEAKLFVGSLPKSLTEDDLASLFKDFGEPLEVFVLKDLTCGGNKGCGFVKMK 286
Query: 292 SPASAQNAIAMMNGCQL 308
A AI +NG ++
Sbjct: 287 YKEQALYAIKELNGKKM 303
>gi|221057576|ref|XP_002261296.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247301|emb|CAQ40701.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 512
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLFI+H+P E+ +L AF FG +LSA++ +K+TG ++ F FVSYE+ SA
Sbjct: 367 GPPGANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENIESAA 426
Query: 298 NAIAMMNGCQLGGKKLKVQL 317
AI+ MNG KKLKV +
Sbjct: 427 AAISQMNGFMALNKKLKVTV 446
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPK++SE V +FS YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK
Sbjct: 193 LPKSISEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKT 252
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQ 100
+EG + P+ V++A+ + +QA+ QS N+ SQ
Sbjct: 253 LEGCARPVEVRFAEPKSAKQAQIPMNMQSMQNSAHGISSQ 292
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LFI +P+ ++++ F+ FG V + DK T + K FV S + A N
Sbjct: 84 PVSIKLFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADN 143
Query: 299 AIAMMNGC-----QLGGKKLK 314
AI +N QLG ++K
Sbjct: 144 AIRSLNNQRTLDPQLGSLQVK 164
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN+ E +V +F +G +K++ I+R K AF+K + +A A+ ++N +
Sbjct: 94 VPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIRSLNNQRT 153
Query: 61 MEGSSVPLVVKWADTE 76
++ L VK+A E
Sbjct: 154 LDPQLGSLQVKYASGE 169
>gi|444509480|gb|ELV09276.1| CUGBP Elav-like family member 5, partial [Tupaia chinensis]
Length = 329
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 59/94 (62%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 53 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 112
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 113 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL 146
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 286 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
GFVS+++PASA+ AI MNG Q+G K+LKVQLKR PY
Sbjct: 288 GFVSFDNPASARAAIQAMNGFQVGAKRLKVQLKRPKDPGHPY 329
>gi|258597555|ref|XP_001350755.2| clustered-asparagine-rich protein [Plasmodium falciparum 3D7]
gi|254945409|gb|AAN36435.2| clustered-asparagine-rich protein [Plasmodium falciparum 3D7]
Length = 445
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G+NLFI+HIP E+ D +L F FG ++S+K+ D +TG + FGFVSY++ SAQ
Sbjct: 356 GPSGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRD-STGRNSGFGFVSYDNVISAQ 414
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
+AI MNG + K LKVQLK+
Sbjct: 415 HAIQFMNGYFVNNKYLKVQLKK 436
>gi|47215209|emb|CAG01416.1| unnamed protein product [Tetraodon nigroviridis]
Length = 431
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+K+ + +A AA+ A++G
Sbjct: 137 MLNKQQSEDDVRRLFESFGCIEECTILRGPDGNSKGCAFVKFSSHAEAQAAISALHGSQT 196
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 197 MPGASSSLVVKFADTDKERTIRRMQQMAGQ 226
>gi|208022666|ref|NP_001129075.1| CUG-BP- and ETR-3-like factor 5 [Rattus norvegicus]
Length = 395
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 11/120 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 102 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 161
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 162 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAYA 210
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 14 IPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMARPIQVKPADSE 89
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 301
LF+ IP+ +Q+L F+ FGR+ V D TGV K F++Y + SA A A
Sbjct: 8 KLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTA 67
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNK 325
+ L G +Q+K + +N+
Sbjct: 68 LHEQKTLPGMARPIQVKPADSENR 91
>gi|84999108|ref|XP_954275.1| ribonucleoprotein [Theileria annulata]
gi|65305273|emb|CAI73598.1| ribonucleoprotein, putative [Theileria annulata]
Length = 515
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 59/86 (68%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
++LFI+HIP ++ + +L F FGRV+ A++ VD++T SK + FVSY++P SA A+A
Sbjct: 430 SSLFIFHIPPQWNNNDLFRTFSPFGRVVQARIAVDRSTNRSKGYAFVSYDNPESATQAVA 489
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNKPY 327
MNG + GKKL+V K N ++ PY
Sbjct: 490 NMNGFTIMGKKLRVNYKTTNNRSNPY 515
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPK+++E ++S+LF +G ++ +L+ + +KGC F+K + KEQAL A++ +NGK
Sbjct: 224 LPKSLTEEDLSSLFKEFGEAMEVFVLKDLACGGNKGCGFVKMKYKEQALHAIKELNGKKM 283
Query: 61 MEGSSVPLVVKWA 73
+EGS PL V++A
Sbjct: 284 LEGSVRPLEVRFA 296
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E+++ LF +G +KD+ ++R + K CAF+K + QA AA+ +N +
Sbjct: 124 IPKTHEESDLRRLFEEFGVVKDVIVIRDKTSNAHKNCAFVKMASICQADAAVRRLNNQRV 183
Query: 61 MEGSSVPLVVKWADTEKER 79
++ S + +++A E ER
Sbjct: 184 IDSSLGAVQIRYATGEVER 202
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 235 QIEGPPG---ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
Q+ G PG A LF+ +P+ +++L + F+ FG + V D A G +K GFV +
Sbjct: 207 QMAGEPGVDEAKLFVGSLPKSLTEEDLSSLFKEFGEAMEVFVLKDLACGGNKGCGFVKMK 266
Query: 292 SPASAQNAIAMMNGCQL 308
A +AI +NG ++
Sbjct: 267 YKEQALHAIKELNGKKM 283
>gi|357017087|gb|AET50572.1| hypothetical protein [Eimeria tenella]
Length = 299
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 232 SGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 291
SG Q GPPGANLF++HIP ++ D +L FQ FG ++SA++ D G S+ FGFVS+
Sbjct: 167 SGSQF-GPPGANLFVFHIPNDWNDVDLIQHFQHFGDIVSARIQRD-VEGRSRGFGFVSFA 224
Query: 292 SPASAQNAIAMMNGCQLGGKKLKVQLKR 319
SA +AI M+G +GGK LKVQLK+
Sbjct: 225 DQTSAVHAIRGMHGFLVGGKHLKVQLKK 252
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LP ++E + + YG + L + Q G AF+ + + +A A++ I+G+
Sbjct: 13 LPHTLTEDALRSKMQEYGHVASLFYMADQLQQQTGWAFVTFCSPTEAQNAVDGIDGQLTF 72
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 121
EG P + A+ + + + +A+N P + P ++G+ Y
Sbjct: 73 EGFESPAECRMANQKPNAAGAKKAADKKEASNAPPGPNS--------PWQQYFTHDGHAY 124
Query: 122 QASGSYGLMQYRLPPMQNQP 141
+ G+ Q+ PP ++P
Sbjct: 125 YYNSQTGVTQWERPPELDKP 144
>gi|289547698|ref|NP_001166144.1| CUGBP Elav-like family member 5 isoform 2 [Homo sapiens]
Length = 409
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 11/120 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 140 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 200 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAYA 248
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 52 IPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 111
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 112 LPGMARPIQVKPADSE 127
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 226 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 283 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>gi|145506438|ref|XP_001439180.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406363|emb|CAK71783.1| unnamed protein product [Paramecium tetraurelia]
Length = 386
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLF++H+P E D +L + F ++G V+SA+V D TG SK FGFVS++ SAQ
Sbjct: 278 GPPGANLFVFHLPNEHKDSDLMDLFSSYGNVISARVMTDPKTGKSKGFGFVSFDKQESAQ 337
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
A M+G + KKL V K+
Sbjct: 338 KAKEAMDGHLIDKKKLSVTFKQ 359
>gi|145493210|ref|XP_001432601.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399714|emb|CAK65204.1| unnamed protein product [Paramecium tetraurelia]
Length = 388
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLF++H+P E D +L + F ++G V+SA+V D TG SK FGFVS++ SAQ
Sbjct: 280 GPPGANLFVFHLPNEHKDSDLMDLFSSYGNVISARVMTDPKTGKSKGFGFVSFDKQESAQ 339
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
A M+G + KKL V K+
Sbjct: 340 KAKEAMDGHLIDKKKLSVTFKQ 361
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYG-TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P E ++ S G T+ D+Q+L+ SKG A +K+ ++ A + + K
Sbjct: 23 IPSAWDELKLKHFLSSQGYTVSDVQMLKKDDPKSKGAAIVKFNKMQEGEKATKQL--KEV 80
Query: 61 MEGSSVPLVVKWADTEKER 79
PLV+KWA+ EKER
Sbjct: 81 AVDGMQPLVLKWAEGEKER 99
>gi|62087714|dbj|BAD92304.1| bruno-like 5, RNA binding protein variant [Homo sapiens]
Length = 421
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 11/120 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 152 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 211
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 212 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAYA 260
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 64 IPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 123
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 124 LPGMARPIQVKPADSE 139
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 226 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 38 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 97
Query: 283 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 98 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 141
>gi|189339278|ref|NP_795928.2| CUG-BP- and ETR-3-like factor 5 [Mus musculus]
Length = 395
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 11/120 (9%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 102 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 161
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 162 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT------PSL--TLPFS---PYSAYA 210
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 14 IPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMARPIQVKPADSE 89
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 301
LF+ IP+ +Q+L F+ FGR+ V D TGV K F++Y + SA A A
Sbjct: 8 KLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTA 67
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNK 325
+ L G +Q+K + +++
Sbjct: 68 LHEQKTLPGMARPIQVKPADSESR 91
>gi|71994109|ref|NP_001022296.1| Protein ETR-1, isoform c [Caenorhabditis elegans]
gi|351063337|emb|CCD71492.1| Protein ETR-1, isoform c [Caenorhabditis elegans]
Length = 145
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 223 STSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
+T+S+ G ++GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +S
Sbjct: 57 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 116
Query: 283 KCFG 286
KCFG
Sbjct: 117 KCFG 120
>gi|389586460|dbj|GAB69189.1| clustered-asparagine-rich protein [Plasmodium cynomolgi strain B]
Length = 509
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
++ GP G+NLFI+HIP E+ D +L F FG ++S+K+ D TG + FGFVSY++
Sbjct: 419 KLNGPNGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRDN-TGRNSGFGFVSYDNIL 477
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKR 319
SAQ+AI MNG + K LKVQLK+
Sbjct: 478 SAQHAIQFMNGYFVNNKYLKVQLKK 502
>gi|351702706|gb|EHB05625.1| CUG-BP- and ETR-3-like factor 3 [Heterocephalus glaber]
Length = 381
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
G+ GFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 334 GMQHYTGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 381
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|380792869|gb|AFE68310.1| CUGBP Elav-like family member 3 isoform 1, partial [Macaca mulatta]
Length = 368
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|66802807|ref|XP_635247.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60463542|gb|EAL61727.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 489
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLP++ E ++ LF +G ++D+ ILRG SKGC F+K++ +E AL+A+ +NG K
Sbjct: 97 MLPRSYEEEQIRELFEPHGVVEDICILRGPNSESKGCGFIKFDNRESALSAIATLNG-MK 155
Query: 61 MEGSSVPLVVKWADTEKERQAR 82
++GS PLVVK+ADTEK+++ +
Sbjct: 156 LDGSPNPLVVKFADTEKDKKKK 177
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
+PK+ +E E+ LF+ I+ + +++ +GCAF+ ++E+A A+E ++ K
Sbjct: 10 IPKSFNEEEIKNLFTNIANIESVSLIKNKTTNEPQGCAFVSVPSREEADRAIEQLHNSKK 69
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+G L VK+AD+E+E+ A +
Sbjct: 70 FQGVLNNLQVKYADSEQEKLASK 92
>gi|300176496|emb|CBK24161.2| unnamed protein product [Blastocystis hominis]
Length = 562
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP GANLFIY +P F + +L + F FG+++S K++ D+ TG S+ FGFVS+++
Sbjct: 293 QEEGPVGANLFIYDVPLSFTESDLMSLFSPFGKIVSTKIYRDRKTGKSRGFGFVSFDNVD 352
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 324
SA AI M+G ++ K L+VQ K+ KQN
Sbjct: 353 SADVAIQKMDGYEIESKVLQVQ-KKIIKQN 381
>gi|156095725|ref|XP_001613897.1| clustered-asparagine-rich protein [Plasmodium vivax Sal-1]
gi|148802771|gb|EDL44170.1| clustered-asparagine-rich protein, putative [Plasmodium vivax]
Length = 505
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
++ GP G+NLFI+HIP E+ D +L F FG ++S+K+ D TG + FGFVSY++
Sbjct: 415 KLNGPNGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRDN-TGRNSGFGFVSYDNIL 473
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKR 319
SAQ+AI MNG + K LKVQLK+
Sbjct: 474 SAQHAIQFMNGYFVNNKYLKVQLKK 498
>gi|403220479|dbj|BAM38612.1| CUG-BP- and ETR-3-like factor 1 [Theileria orientalis strain
Shintoku]
Length = 290
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 225 SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 284
+S+ ++ PPG+NLFI+HIP + D EL F FG ++SAKV D A G +
Sbjct: 192 ASTSSLSDRNRLSAPPGSNLFIFHIPNVWDDTELSMHFTPFGNLVSAKVQRD-ANGCNSG 250
Query: 285 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 321
FGFV+Y++P SA A+ +MNG K LKVQ K+++
Sbjct: 251 FGFVTYDNPVSATAAVQLMNGFATHSKFLKVQHKKND 287
>gi|221061755|ref|XP_002262447.1| Clustered-asparagine-rich protein [Plasmodium knowlesi strain H]
gi|193811597|emb|CAQ42325.1| Clustered-asparagine-rich protein, putative [Plasmodium knowlesi
strain H]
Length = 474
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
++ GP G+NLFI+HIP E+ D +L F FG ++S+K+ D TG + FGFVSY++
Sbjct: 384 KLNGPNGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRDN-TGRNSGFGFVSYDNIL 442
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKR 319
SAQ+AI MNG + K LKVQLK+
Sbjct: 443 SAQHAIQFMNGYFVNNKYLKVQLKK 467
>gi|68075463|ref|XP_679650.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500445|emb|CAH93543.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 287
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGAN+F++H+P + D EL FQ FG V+SA++ D A G +K +GFVS+ +P SA
Sbjct: 148 GPPGANVFVFHLPSHWTDMELYQHFQHFGYVVSARIQRD-ANG-NKGYGFVSFNNPESAL 205
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
NAI M+G + GK LKVQLK+
Sbjct: 206 NAIKGMHGFYVSGKHLKVQLKK 227
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PK+V+E E+ + YG + + + + Q+ +G AF+ YE + +A A+E+++ K
Sbjct: 14 IPKDVTEDELKTEVAKYGNVVQVYYVPATAQSPRGWAFITYEQRSEAYKAIESLDYKCIF 73
Query: 62 EGSSVPLVVKWA 73
S PL V++A
Sbjct: 74 PNSQRPLDVRFA 85
>gi|47215644|emb|CAG01361.1| unnamed protein product [Tetraodon nigroviridis]
Length = 267
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G
Sbjct: 146 MLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQT 205
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 206 MPGASSSLVVKFADTDKERTIRRMQQMVGQ 235
>gi|70949035|ref|XP_743965.1| clustered-asparagine-rich protein [Plasmodium chabaudi chabaudi]
gi|56523713|emb|CAH77145.1| clustered-asparagine-rich protein, putative [Plasmodium chabaudi
chabaudi]
Length = 396
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G+NLFI+HIP E+ D +L F FG ++S+K+ D +TG + FGFVSY++ SA
Sbjct: 307 GPSGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRD-STGRNSGFGFVSYDNVMSAH 365
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
+AI MNG + K LKVQLK+
Sbjct: 366 HAIQFMNGYFVNNKYLKVQLKK 387
>gi|83317416|ref|XP_731152.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491098|gb|EAA22717.1| clustered-asparagine-rich protein-related [Plasmodium yoelii
yoelii]
Length = 432
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G+NLFI+HIP E+ D +L F FG ++S+K+ D +TG + FGFVSY++ SA
Sbjct: 322 GPSGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRD-STGRNSGFGFVSYDNVMSAH 380
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
+AI MNG + K LKVQLK+
Sbjct: 381 HAIQFMNGYFVNNKYLKVQLKK 402
>gi|37588904|gb|AAH04145.2| TNRC4 protein, partial [Homo sapiens]
Length = 291
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 92 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 151
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 152 LPGASSSLVVKFADTEKERGLRRMQQVATQ 181
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 6 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 65
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 66 LPGMNRPIQVKPADSE 81
>gi|82541152|ref|XP_724838.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479626|gb|EAA16403.1| FCA gamma-related [Plasmodium yoelii yoelii]
Length = 387
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 80/259 (30%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LPKN++E + +FS+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK
Sbjct: 192 LPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKT 251
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+EG + P+ V++A+ + +Q AQSQ
Sbjct: 252 LEGCNRPVEVRFAEPKSSKQ------AQSQVG---------------------------- 277
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG---NAMRGASPDLSSNMGPRNYAMPPS 177
+ P+QN P HGI P + G N G + +++N PR +
Sbjct: 278 -------------IQPLQNAP--HGISPQAHPGTPNNINYGNNFGVNNNY-PRQVGVWKE 321
Query: 178 GFVGSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGS 232
+ G G P Q+ MP L +NN+P N S SS
Sbjct: 322 YYSGEGRPYYYNEQTNTTQWEMPKEFETLF---MNNNPNI-------HNLSDSS------ 365
Query: 233 GGQIEGPPGANLFIYHIPQ 251
GPPGANLFI+H+PQ
Sbjct: 366 -----GPPGANLFIFHVPQ 379
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LFI +P+ + +++L F+ FG V + DK T + K FV S + A N
Sbjct: 83 PVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADN 142
Query: 299 AIAMMNG-----CQLGGKKLK 314
AI +N QLG ++K
Sbjct: 143 AIRSLNNQRTLDQQLGSLQVK 163
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
G A LFI +P+ ++ + + F +G V + D +TG+ K FV + A
Sbjct: 181 GVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQAL 240
Query: 298 NAIAMMNG 305
AI+ +NG
Sbjct: 241 YAISSLNG 248
>gi|405967996|gb|EKC33105.1| CUG-BP- and ETR-3-like factor 4 [Crassostrea gigas]
Length = 349
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 56/86 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF +G I++ ILR SKGCAF+K+ +A +A+ A++G
Sbjct: 44 MLNKQQTEDDVRQLFQPFGNIEECTILRDQNGNSKGCAFVKFSGHNEAQSAINALHGSQT 103
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 104 MPGASSSLVVKFADTEKERQLRRMQQ 129
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 286 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
GFVS+++P SAQ AI MNG Q+G K+LKVQLKR QN+PY
Sbjct: 308 GFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDQNRPY 349
>gi|260787640|ref|XP_002588860.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
gi|229274031|gb|EEN44871.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
Length = 204
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E +V LF +GTI++ ILRG SKGCAF+K+ + +A AA+ ++G
Sbjct: 36 MLGKQQTEEDVRRLFDPFGTIEECTILRGPDGQSKGCAFVKFSSHAEAQAAINNLHGSQT 95
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S +VVK+ADT+KERQ R+ Q+
Sbjct: 96 MPGASSSIVVKFADTDKERQLRKMQQ 121
>gi|62858167|ref|NP_001016491.1| CUG-BP- and ETR-3-like factor 3 [Xenopus (Silurana) tropicalis]
gi|89272955|emb|CAJ83148.1| trinucleotide repeat containing 4 [Xenopus (Silurana) tropicalis]
Length = 313
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +G I + +LRG TSKGCAF+K++T +A AA+ A++G
Sbjct: 101 MLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVANQ 190
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|401395449|ref|XP_003879604.1| putative RNA recognition motif domain-containing protein [Neospora
caninum Liverpool]
gi|325114011|emb|CBZ49569.1| putative RNA recognition motif domain-containing protein [Neospora
caninum Liverpool]
Length = 367
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
+ GP G+NLF+YHIP E+ +Q+ F FG V+S K+ + TG FGFVSY++ AS
Sbjct: 249 LYGPLGSNLFVYHIPPEWTEQQFFRHFAPFGNVISCKIQTNSQTGKRSGFGFVSYDNQAS 308
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 326
A AI MNG GK LKVQLK+ + P
Sbjct: 309 AIAAIRSMNGYATCGKFLKVQLKKGEEHLLP 339
>gi|449470886|ref|XP_002191720.2| PREDICTED: CUGBP Elav-like family member 4-like [Taeniopygia
guttata]
Length = 365
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G
Sbjct: 25 MLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 85 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 114
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 286 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
GFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 324 GFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 365
>gi|399217955|emb|CCF74842.1| unnamed protein product [Babesia microti strain RI]
Length = 252
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
PPG NLF++HIP + DQ L F FG ++S++V DK G ++ FGFVSY++P S+
Sbjct: 160 APPGNNLFVFHIPCTWNDQNLYEHFCKFGNIISSRVQCDK-NGRNRGFGFVSYDNPESSA 218
Query: 298 NAIAMMNGCQLGGKKLKVQLKR-DN 321
AI MNG G K LKV LKR DN
Sbjct: 219 EAIKHMNGFNTGDKYLKVMLKRGDN 243
>gi|237834677|ref|XP_002366636.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|211964300|gb|EEA99495.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|221486075|gb|EEE24345.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii GT1]
gi|221503571|gb|EEE29262.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 307
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 229 GTGSGGQ--IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
G G+ G + GP G+NLF+YHIP E+ +Q+ F FG V+S K+ + TG FG
Sbjct: 203 GVGAKGSPVLYGPLGSNLFVYHIPPEWTEQQFFRHFAPFGNVISCKIQTNAQTGKRSGFG 262
Query: 287 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 326
FVSY++ ASA AI MNG GK LKVQLK+ + P
Sbjct: 263 FVSYDNQASAIAAIRAMNGYAACGKFLKVQLKKGEEHLLP 302
>gi|338224497|gb|AEI88122.1| hypothetical protein [Scylla paramamosain]
Length = 166
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%)
Query: 7 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 66
SE +V +FS +GTI++ +LR + SKGCAF+ + T++ A+ A++ ++ MEG S
Sbjct: 2 SEQDVRVMFSSHGTIEECTVLRDNNGQSKGCAFVTFSTRQCAINAIKKMHHSQTMEGCSS 61
Query: 67 PLVVKWADTEKERQARRAQKAQSQANNLPNAD 98
PLVVK+ADT+KE+ A+R Q+ N+ +A+
Sbjct: 62 PLVVKFADTQKEKDAKRLQQVTQNLWNVASAN 93
>gi|149030745|gb|EDL85782.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 284
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>gi|12642588|gb|AAK00298.1|AF314173_1 BRUL4 [Mus musculus]
Length = 298
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 52/91 (57%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EG G NL IYH+PQEFGD EL F FG FV++++PASA
Sbjct: 228 EGSEGCNLLIYHLPQEFGDAELMQMFLPFG--------------------FVTFDNPASA 267
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 268 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 298
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 34 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 4 SKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 60
>gi|429328773|gb|AFZ80533.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 290
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
++ PPG+NLFI+HIP + D EL F FG ++SAKV D A G + FGFV+Y++P
Sbjct: 200 NRLSAPPGSNLFIFHIPNVWDDAELAMHFTPFGNLISAKVQRD-AAGCNSGFGFVTYDNP 258
Query: 294 ASAQNAIAMMNGCQLGGKKLKVQLKRD 320
SA A+ +MNG K LKVQ K++
Sbjct: 259 LSASAAVDLMNGFATHSKFLKVQHKKE 285
>gi|242003642|ref|XP_002436197.1| conserved hypothetical protein [Ixodes scapularis]
gi|215499533|gb|EEC09027.1| conserved hypothetical protein [Ixodes scapularis]
Length = 170
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 64/96 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +E++V +FS +G+I++ +LR SKGCAF+ Y +++ A+ A++A+N
Sbjct: 13 MLAKECNESDVRVMFSPFGSIEECTVLRDGSGQSKGCAFVTYASRQCAINAIKAMNHSQT 72
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPN 96
M+G + P+VVK+ADT+KE++ +R Q+ + + N
Sbjct: 73 MKGCNNPMVVKFADTQKEKEQKRQQQVMTNLWTMAN 108
>gi|12239369|gb|AAG49448.1|AF141345_1 LYST-interacting protein LIP9 [Homo sapiens]
Length = 213
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A A++G
Sbjct: 41 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEARPPFNALHGSQT 100
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 101 MPGASSSLVVKFADTDKERTMRRMQQMVGQ 130
>gi|403221555|dbj|BAM39688.1| RNA-binding protein [Theileria orientalis strain Shintoku]
Length = 283
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 9/94 (9%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
ANLF++H+P + D +L F+ FG V+SA+V D A G ++ FGF+SY++P SA AI
Sbjct: 162 ANLFVFHVPANWNDIDLIEHFKHFGNVISARVQRDSA-GRNRGFGFISYDNPQSAVVAIK 220
Query: 302 MMNGCQLGGKKLKVQLKR--------DNKQNKPY 327
MNG +GGK LKVQLK+ D Q +PY
Sbjct: 221 NMNGFSVGGKYLKVQLKKGEEHYMHSDQYQVQPY 254
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+P NV+E ++ + S YG + L + + + G AF+ +ET E A A++A+NGK
Sbjct: 18 VPTNVTEEQLKSELSKYGQLVSLFYMPDQTKQNNGWAFVTFETNENASDAIDALNGKVVF 77
Query: 62 EGSSVPLVVKWA 73
+GSS L V +A
Sbjct: 78 DGSSQGLEVVYA 89
>gi|357479035|ref|XP_003609803.1| FCA [Medicago truncatula]
gi|355510858|gb|AES92000.1| FCA [Medicago truncatula]
Length = 862
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K S EV +FS YG I+D+ ++R Q+ S+GC F+KY ++ ALAA+ A+NG + M
Sbjct: 255 LNKQASVKEVEEVFSKYGRIEDVYLMRDDQKQSRGCGFVKYSHRDMALAAINALNGIYTM 314
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSL--FGALPMG-YAPPYNG 118
G PL+V++AD ++ RQ A A P DS L + PMG + PP N
Sbjct: 315 RGCEQPLIVRFADPKRPRQGDSRGPAFGSAGFGPRLDSPGTRLPSNNSDPMGDHIPPPNA 374
Query: 119 YGYQASGSYGLMQYRLPPMQNQPGFHGIIPPV 150
+ + G GFHG+ PP+
Sbjct: 375 WRPIPQPNTG--------TSFNAGFHGMGPPL 398
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E ++ LF +G + ++ +++ + +GC F+KY T E+A A+ A++ +H
Sbjct: 164 VPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIRALHNRHT 223
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 224 LPGGVGPIQVRYADGERER 242
>gi|68060657|ref|XP_672316.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489278|emb|CAI01561.1| hypothetical protein PB300270.00.0 [Plasmodium berghei]
Length = 135
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGAN+F++H+P + D EL FQ FG V+SA++ D A G +K +GFVS+ +P SA
Sbjct: 54 GPPGANVFVFHLPSHWTDMELYQHFQHFGYVVSARIQRD-ANGRNKGYGFVSFNNPESAL 112
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
NAI M+G + K LKVQLK+
Sbjct: 113 NAIKGMHGFYV-SKHLKVQLKK 133
>gi|68060655|ref|XP_672315.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489277|emb|CAI01560.1| hypothetical protein PB300269.00.0 [Plasmodium berghei]
Length = 230
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGAN+F++H+P + D EL FQ FG V+SA++ D A G +K +GFVS+ +P SA
Sbjct: 148 GPPGANVFVFHLPSHWTDMELYQHFQHFGYVVSARIQRD-ANGRNKGYGFVSFNNPESAL 206
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
NAI M+G + K LKVQLK+
Sbjct: 207 NAIKGMHGFYV-SKHLKVQLKK 227
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PK+V+E E+ + YG + + + + Q+ +G AF+ YE + +A A+E+++ K
Sbjct: 14 IPKDVTEDELKTEVAKYGNVVQVYYVPATAQSPRGWAFITYEQRSEAYKAIESLDYKCIF 73
Query: 62 EGSSVPLVVKWA 73
S PL V++A
Sbjct: 74 PNSQRPLDVRFA 85
>gi|255556436|ref|XP_002519252.1| Flowering time control protein FCA, putative [Ricinus communis]
gi|223541567|gb|EEF43116.1| Flowering time control protein FCA, putative [Ricinus communis]
Length = 811
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +FS YG ++D+ ++R + S+GC F+KY ++E ALAA+ A+NG +KM
Sbjct: 259 LNKQATEKEVEEIFSPYGHVEDVYLMRDEMKQSRGCGFVKYSSREMALAAINALNGIYKM 318
Query: 62 EGSSVPLVVKWADTEKER 79
G PL V++AD ++ R
Sbjct: 319 RGCDQPLTVRFADPKRPR 336
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ SE ++ LF +G + ++ +++ + +GC F+KY T E+A A+ A++ +H
Sbjct: 168 VPRTASEEDIRPLFEQHGNVIEVALIKDKRTGQQQGCCFVKYATSEEADRAIRALHNQHT 227
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 228 LPGGIGPIQVRFADGERER 246
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 300
A LF+ +P+ ++++ F+ G V+ + DK TG + FV Y + A AI
Sbjct: 161 AKLFVGSVPRTASEEDIRPLFEQHGNVIEVALIKDKRTGQQQGCCFVKYATSEEADRAIR 220
Query: 301 AMMNGCQLGGKKLKVQLK 318
A+ N L G +Q++
Sbjct: 221 ALHNQHTLPGGIGPIQVR 238
>gi|403276018|ref|XP_003929714.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 1 MLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 60
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 61 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACSAYT 108
>gi|348583729|ref|XP_003477625.1| PREDICTED: CUGBP Elav-like family member 6-like [Cavia porcellus]
Length = 472
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 132 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 191
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q L HP+ LP+G Y
Sbjct: 192 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAL------HPA---PLPLGACGAYT 239
>gi|148694025|gb|EDL25972.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 465
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 145 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 204
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 205 MTGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACGAYT 252
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 58 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 117
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 118 LPGMNRPIQVKPAASEGRGEDRK 140
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 223 STSSSGGTGSGGQIEGP-------PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 275
ST+ SGG G G GP LF+ IP+ +Q+L F+ FGR+ V
Sbjct: 26 STADSGG-GMSGLNPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLK 84
Query: 276 DKATGVSKCFGFVSY---ESPASAQNAI 300
D+ TG+ K F++Y +S AQ+A+
Sbjct: 85 DRLTGLHKGCAFLTYCARDSALKAQSAL 112
>gi|326675888|ref|XP_003200459.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Danio rerio]
Length = 516
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LRG SKGCAF+K+ + +A AA+ +++G
Sbjct: 128 MLGKQQCEEDVRCLFEAFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQT 187
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR + Q
Sbjct: 188 MPGASSSLVVKFADTDKERTLRRMHQMAGQ 217
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 41 IPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKT 100
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 101 LPGMNRPIQVKPADSEGRGEERK 123
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 213 VSPAVANSNPSTSSSGGTGSGGQIEGP----PGANLFIYHIPQEFGDQELGNAFQAFGRV 268
++ A + ST++S G G + P LFI IP+ +++L F+ FG++
Sbjct: 1 MASVTAENGFSTANSSGNGRMNGLTIPLKDHDAIKLFIGQIPRNLEEKDLKPLFEEFGKI 60
Query: 269 LSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
V D+ TG+ K F++Y ES AQ+A+
Sbjct: 61 YELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 95
>gi|26329793|dbj|BAC28635.1| unnamed protein product [Mus musculus]
gi|34784979|gb|AAH57083.1| Brunol6 protein [Mus musculus]
Length = 345
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 25 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 84
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 85 MTGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACGAYT 132
>gi|403276014|ref|XP_003929712.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 368
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 27 MLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 86
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 87 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACSAYT 134
>gi|390344759|ref|XP_782270.3| PREDICTED: CUGBP Elav-like family member 1-A-like
[Strongylocentrotus purpuratus]
Length = 605
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E++V +FS +G+I++ ILR KGCAF+ Y T++ AL + +++
Sbjct: 149 MLSKKCDESDVRIMFSAFGSIEECHILRDQMGGHKGCAFVTYATRQMALNCIRSMHQSRI 208
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQA--NNL 94
M+G + LVVK+ADT+KE++ ++ Q+ Q NNL
Sbjct: 209 MDGCTSKLVVKFADTQKEKEQKKLQQMAQQMCYNNL 244
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
Q EGP GANLFIYH+PQ++ D +L + F +G +LSAKVF+DK T +SKCF
Sbjct: 541 QKEGPEGANLFIYHLPQDYTDTDLISMFSPYGGILSAKVFIDKNTNLSKCF 591
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+PK E ++ +FS +G + +L +LR + SKGCAF+ + + A A + ++ +
Sbjct: 64 IPKAYEEDKLREMFSEFGPVYELNVLRDKKTGESKGCAFVTFYSGVVADKAQKELHNRKV 123
Query: 61 MEGSSVPLVVKWADTEKERQ 80
+ G P+ +K AD E E +
Sbjct: 124 LPGMRHPIQMKPADCEVEER 143
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+ IP+ + + +L F FG V V DK TG SK FV++ S A
Sbjct: 54 PDSLKMFVGQIPKAYEEDKLREMFSEFGPVYELNVLRDKKTGESKGCAFVTFYSGVVADK 113
Query: 299 A 299
A
Sbjct: 114 A 114
>gi|34328409|ref|NP_780444.2| CUGBP Elav-like family member 6 [Mus musculus]
gi|81912009|sp|Q7TN33.1|CELF6_MOUSE RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|30851561|gb|AAH52406.1| Bruno-like 6, RNA binding protein (Drosophila) [Mus musculus]
Length = 460
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 200 MTGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACGAYT 247
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 223 STSSSGGTGSGGQIEGPP-------GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 275
ST+ SGG G G GP LF+ IP+ +Q+L F+ FGR+ V
Sbjct: 21 STADSGG-GMSGLNPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLK 79
Query: 276 DKATGVSKCFGFVSY---ESPASAQNAI 300
D+ TG+ K F++Y +S AQ+A+
Sbjct: 80 DRLTGLHKGCAFLTYCARDSALKAQSAL 107
>gi|148694026|gb|EDL25973.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 459
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 200 MTGASSSLVVKLADTDRERALRRMQQMAGQ 229
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 223 STSSSGGTGSGGQIEGPP-------GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 275
ST+ SGG G G GP LF+ IP+ +Q+L F+ FGR+ V
Sbjct: 21 STADSGG-GMSGLNPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLK 79
Query: 276 DKATGVSKCFGFVSY---ESPASAQNAI 300
D+ TG+ K F++Y +S AQ+A+
Sbjct: 80 DRLTGLHKGCAFLTYCARDSALKAQSAL 107
>gi|73961237|ref|XP_852916.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Canis lupus
familiaris]
Length = 488
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML SE +V L I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNTQQSEDDVRRLVKALRNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 49/93 (52%), Gaps = 22/93 (23%)
Query: 237 EGPPG-ANLFIY-HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
EGP G LFIY P+ GD EL F FG FVS+++PA
Sbjct: 416 EGPRGPVTLFIYPSAPRSLGDAELMQMFLPFG--------------------FVSFDNPA 455
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 488
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGC F Y ++ L +G+
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCRFSTYCSRPSNLRDRGTRHGEGS 120
Query: 61 MEGSSVPLVVKWADTEKE 78
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSESR 138
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
LFI IP+ +++L F+ FG++ V D+ TG+ K F +Y S
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCRFSTYCS 104
>gi|221504366|gb|EEE30041.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 1216
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
G P +F++H+P E+ D +L F+ GR+ +A + DK G S+ FGF+++ SPA+A
Sbjct: 723 GRPECTVFVFHVPPEWSDGDLRRHFRHLGRIRAATIQRDKDDGQSRGFGFITFGSPAAAL 782
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNK 322
NA+A MNG G K LKV LK ++
Sbjct: 783 NAVAGMNGFHTGSKYLKVMLKHTDR 807
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
+LF++H+P +GD++L F+ +GR SA V V + G SK +GFV +E SA A+
Sbjct: 391 CSLFVFHVPPLWGDEQLLQHFELYGRCASA-VVVRRRDGTSKGYGFVDFEDAESALCALQ 449
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNKPY 327
N + GK+LKV LK + K+ +PY
Sbjct: 450 QANQAHVDGKRLKVLLKTEPKK-RPY 474
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+F++ IP + + +L F +G + S +V K+ G ++ +GFV + SAQ A+
Sbjct: 246 NVFVFQIPLSWAEDDLHQQFSEWGTITSVRV-ERKSDGRNRGYGFVCFSDAESAQRAVEG 304
Query: 303 MNGCQLGGKKLKVQLKRDNKQN 324
M+G GK+LKV LK+ +Q
Sbjct: 305 MDGRVFEGKQLKVSLKKPRQQE 326
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 15 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 71
F +YG ++R TSKG F+ +E E AL AL+ N H ++G + +++K
Sbjct: 411 FELYGRCASAVVVRRRDGTSKGYGFVDFEDAESALCALQQANQAH-VDGKRLKVLLK 466
>gi|237841159|ref|XP_002369877.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211967541|gb|EEB02737.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|221483609|gb|EEE21921.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1216
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
G P +F++H+P E+ D +L F+ GR+ +A + DK G S+ FGF+++ SPA+A
Sbjct: 723 GRPECTVFVFHVPPEWSDGDLRRHFRHLGRIRAATIQRDKDDGQSRGFGFITFGSPAAAL 782
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNK 322
NA+A MNG G K LKV LK ++
Sbjct: 783 NAVAGMNGFHTGSKYLKVMLKHTDR 807
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
+LF++H+P +GD++L F+ +GR SA V V + G SK +GFV +E SA A+
Sbjct: 391 CSLFVFHVPPLWGDEQLLQHFELYGRCASA-VVVRRRDGTSKGYGFVDFEDAESALCALQ 449
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNKPY 327
N + GK+LKV LK + K+ +PY
Sbjct: 450 QANQAHVDGKRLKVLLKTEPKK-RPY 474
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+F++ IP + + +L F +G + S +V K+ G ++ +GFV + SAQ A+
Sbjct: 246 NVFVFQIPLSWAEDDLHQQFSEWGTITSVRV-ERKSDGRNRGYGFVCFSDAESAQRAVEG 304
Query: 303 MNGCQLGGKKLKVQLKRDNKQN 324
M+G GK+LKV LK+ +Q
Sbjct: 305 MDGRVFEGKQLKVSLKKPRQQE 326
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 15 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 71
F +YG ++R TSKG F+ +E E AL AL+ N H ++G + +++K
Sbjct: 411 FELYGRCASAVVVRRRDGTSKGYGFVDFEDAESALCALQQANQAH-VDGKRLKVLLK 466
>gi|195111486|ref|XP_002000309.1| GI10157 [Drosophila mojavensis]
gi|193916903|gb|EDW15770.1| GI10157 [Drosophila mojavensis]
Length = 356
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 229 GTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 288
G G +I+ G NL I ++P + + EL F +FG + K+ D TG S C+GFV
Sbjct: 18 GVTDGKEIQQSGGTNLLINYLPSDMQENELHQLFNSFGLLRQVKIIRDPETGASHCYGFV 77
Query: 289 SYESPASAQNAIAMMNGCQLGGKKLKVQLKR----DNKQNKPY 327
+Y + SA A+ MNGC + GKKLKV + R D K+ Y
Sbjct: 78 NYTNSISANKALNSMNGCPVRGKKLKVSMARPSSDDTKKTNIY 120
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N+++ ++P + ++ F+ FG+++ + D+ T S+ FV YE AS + AI
Sbjct: 117 TNIYVGNLPLSYDAAQVREIFERFGKIVDLNLLKDRYTNQSRGTAFVRYEMRASVEKAIL 176
Query: 302 MMNG--CQLGGKKLKVQLKRDNKQ 323
+N + G L V+L + K+
Sbjct: 177 ALNDFVVERGHPPLHVRLVKRPKE 200
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
LP + A+V +F +G I DL +L+ S+G AF++YE + A+ A+N
Sbjct: 124 LPLSYDAAQVREIFERFGKIVDLNLLKDRYTNQSRGTAFVRYEMRASVEKAILALND-FV 182
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPS 103
+E PL V+ KE + + + P+ D+ S
Sbjct: 183 VERGHPPLHVRLVKRPKEWAVSKGMNREPDEPSEPSTDTHVDS 225
>gi|118402075|ref|XP_001033357.1| hypothetical protein TTHERM_00421020 [Tetrahymena thermophila]
gi|89287705|gb|EAR85694.1| hypothetical protein TTHERM_00421020 [Tetrahymena thermophila
SB210]
Length = 756
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGANLFI+H+P ++ D +L F+ FG +LSA+V + + G SK +GFVSY SP AQ
Sbjct: 657 GPPGANLFIFHLPNDYRDSDLLRLFKKFGDLLSARV-ITRPDGSSKGYGFVSYTSPDGAQ 715
Query: 298 NAIAMMNGCQ 307
AI MNG Q
Sbjct: 716 QAIQQMNGLQ 725
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PKN SE E+ +F YG +K++ I + TS+G F+K+E EQA+ A +A++ K +
Sbjct: 159 IPKNASEPEIRNVFENYGIVKEVDIPKDQSGTSRGFVFVKFENIEQAILAKQALHEKQVL 218
Query: 62 EGSSVPLVVKWADTEKE 78
+ LVVK+ D +K+
Sbjct: 219 NNQTQSLVVKFYDPKKK 235
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 4 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 63
KN+ E ++ F YG I +Q++R KGCAF+ + + A A+EA+ K+ G
Sbjct: 75 KNMEENDLKTFFEKYGEIVKVQVIRDKNNQHKGCAFVVFASILCANIAIEALKAT-KLPG 133
Query: 64 SSVPLVVKWADTEKER 79
VKWAD E +R
Sbjct: 134 ------VKWADNEPDR 143
>gi|170050452|ref|XP_001861318.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872055|gb|EDS35438.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 286
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 210 PGSVSPAV------ANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQ 263
PG PAV A P + + G I GP G NLFIYH+PQEFGD EL F
Sbjct: 195 PGVAYPAVYGQFPQAIPQPIAAIAPAQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFM 254
Query: 264 AFGRVLSAKVFVDKATGVSKCFG 286
FG V+S+KVF+D+AT SKCFG
Sbjct: 255 PFGTVISSKVFIDRATNQSKCFG 277
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
+ G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 2 IYGASSSLVVKFADTEKERQLRRMQQMAGHMNLL 35
>gi|159164252|pdb|2DNK|A Chain A, Solution Structure Of Rna Binding Domain In Bruno-Like 4
Rna Binding Protein
Length = 105
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 22 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 81
Query: 61 MEGSSVPLVVKWADTEKE 78
M G+S LVVK+ADT+KE
Sbjct: 82 MPGASSSLVVKFADTDKE 99
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 228 GGTGSGGQIEGPPG-ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
G +GS G + PP LF+ + ++ + ++ F+AFG + + + G SK
Sbjct: 1 GSSGSSGCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTI-LRGPDGNSKGCA 59
Query: 287 FVSYESPASAQNAIAMMNGCQL---GGKKLKVQLKRDNKQNKP 326
FV Y S A AQ AI ++G Q L V+ +K++ P
Sbjct: 60 FVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKESGP 102
>gi|19909960|dbj|BAB87831.1| bruno-like RNA-binding protein [Mus musculus]
Length = 326
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 56/83 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 19 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 78
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+ + +R
Sbjct: 79 MEGCSSPMVVKFADTQKDEEQKR 101
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQEL 258
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L
Sbjct: 281 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDL 323
>gi|395729854|ref|XP_002810281.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 3
[Pongo abelii]
Length = 478
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 273 VFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+FVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 424 IFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 478
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 54/144 (37%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA---------------------- 38
ML K ++ +V +F +GTI + +LRG TSKGCA
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCASFEILGFYHRHCKCSNLVFILL 160
Query: 39 --FLKYE------------TKEQAL-------AALEAINGKH-----------KMEGSSV 66
L++E + QA+ L A+ + + +G+S
Sbjct: 161 TLVLRFEAHHEDWGVGAGVVRGQAMPWGWNGNQVLRALGRRDPDPAPLTCVWARAQGASS 220
Query: 67 PLVVKWADTEKERQARRAQKAQSQ 90
LVVK+ADTEKER RR Q+ +Q
Sbjct: 221 SLVVKFADTEKERGLRRMQQVATQ 244
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|338727851|ref|XP_001916440.2| PREDICTED: CUGBP Elav-like family member 4-like [Equus caballus]
Length = 412
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG
Sbjct: 362 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG 411
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
I + LFI + DQ L +AF FG V A+V D+ TG S+ FGFVSYES S
Sbjct: 30 IRCMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTES 89
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
A A++ M+G +LGG+ ++V D +Q +PY
Sbjct: 90 ASEALSAMDGQELGGRNIRVGYATDKRQPQPY 121
>gi|119588316|gb|EAW67910.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_e [Homo
sapiens]
Length = 283
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|224775835|gb|ACN62426.1| MIP02642p [Drosophila melanogaster]
Length = 237
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 146 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 205
Query: 61 MEGSSVPLVVKWADTE 76
MEG S PLVVK+ADT+
Sbjct: 206 MEGCSAPLVVKFADTQ 221
>gi|432098974|gb|ELK28460.1| CUGBP Elav-like family member 4 [Myotis davidii]
Length = 346
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG
Sbjct: 296 EGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG 345
>gi|401399560|ref|XP_003880579.1| putative RNA recognition motif-containing protein [Neospora caninum
Liverpool]
gi|325114990|emb|CBZ50546.1| putative RNA recognition motif-containing protein [Neospora caninum
Liverpool]
Length = 1240
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
G P +F++H+P E+ D +L F+ GR+ +A + DK G S+ FGF+++ SPA+A
Sbjct: 720 GRPDCTVFVFHVPPEWSDWDLRRHFRHLGRIRAATIQRDKDDGQSRGFGFITFGSPAAAL 779
Query: 298 NAIAMMNGCQLGGKKLKVQLKRDNK 322
+A+A MNG G K LKV LK ++
Sbjct: 780 SAVAGMNGFHTGNKYLKVMLKSTDR 804
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 238 GPPGA---NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
GP GA +LF++H+P +GD++L F+ +GR SA V V + G SK +GFV +E
Sbjct: 365 GPTGAVKCSLFVFHVPPLWGDEQLLKHFELYGRCASA-VVVRRRDGTSKGYGFVDFEDAE 423
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SA A+ N + GK+LKV LK ++K+ PY
Sbjct: 424 SALCALQQANQAHVDGKRLKVLLKTESKKRPPY 456
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+F++ IP + + +L F +G + S +V K G ++ +GFV + SAQ A+
Sbjct: 233 NVFVFQIPLSWTEDDLHQQFSEWGTITSVRV-ERKGDGRNRGYGFVCFSDAESAQRAVES 291
Query: 303 MNGCQLGGKKLKVQLKRDNKQNK 325
M+G + GK+LKV LK+ +Q +
Sbjct: 292 MDGRVIEGKQLKVSLKKPRQQER 314
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 15 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 74
F +YG ++R TSKG F+ +E E AL AL+ N H ++G + +++K
Sbjct: 392 FELYGRCASAVVVRRRDGTSKGYGFVDFEDAESALCALQQANQAH-VDGKRLKVLLK--- 447
Query: 75 TEKERQ-------ARRAQKAQSQANNLPNA 97
TE +++ A RAQ A+ + LP+A
Sbjct: 448 TESKKRPPYAHASADRAQGARK--SGLPSA 475
>gi|67983589|ref|XP_669170.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56482979|emb|CAH94499.1| hypothetical protein PB000635.00.0 [Plasmodium berghei]
Length = 103
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP G+NLFI+HIP E+ D +L F FG ++S+K+ D +TG + FGFVSY++ SA
Sbjct: 14 GPCGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRD-STGRNSGFGFVSYDNVMSAH 72
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
+AI MNG + K LKVQLK+
Sbjct: 73 HAIQFMNGYFVNNKYLKVQLKK 94
>gi|380807355|gb|AFE75553.1| CUGBP Elav-like family member 6 isoform 1, partial [Macaca mulatta]
Length = 226
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 139 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 198
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 199 MAGASSSLVVKLADTDRERALRRMQQ 224
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 52 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 111
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 112 LPGMNRPIQVKPAASEGRGEDRK 134
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 46 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 105
Query: 300 I 300
+
Sbjct: 106 L 106
>gi|410930632|ref|XP_003978702.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 376
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 58/83 (69%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + ++ A +A+++++
Sbjct: 114 MISKKCNENDIRLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKR 196
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 285 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 334 LGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 376
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE ++ LF YG + ++ +LR Q SKGC F+ Y T++ AL A A++
Sbjct: 23 IPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQNALHNM 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KILPGMHHPIQMKPADSEK 101
>gi|356565014|ref|XP_003550740.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 733
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + EV +FS YG ++D+ ++R ++ S+GC F+KY ++ ALAA+ A+NG + M
Sbjct: 184 LNKQATVKEVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTM 243
Query: 62 EGSSVPLVVKWADTEKERQ 80
G PL+V++AD ++ RQ
Sbjct: 244 RGCEQPLIVRFADPKRPRQ 262
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ SE ++ LF +G + ++ +++ + +GC F+KY T E+A A+ A++ +H
Sbjct: 93 VPRTASEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIRALHNQHT 152
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 153 LPGGVGPIQVRYADGERER 171
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 226 SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
S G GS +++G A LF+ +P+ ++++ F+ G V+ + DK TG +
Sbjct: 70 SGRGGGSPDRLDGGSFAKLFVGSVPRTASEEDIRPLFEEHGNVIEVALIKDKKTGQHQGC 129
Query: 286 GFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLK 318
F+ Y + A AI A+ N L G +Q++
Sbjct: 130 CFIKYATSEEADQAIRALHNQHTLPGGVGPIQVR 163
>gi|356521753|ref|XP_003529516.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 737
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + EV +FS YG ++D+ ++R ++ S+GC F+KY ++ ALAA+ A+NG + M
Sbjct: 184 LNKQATVKEVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTM 243
Query: 62 EGSSVPLVVKWADTEKERQ 80
G PL+V++AD ++ RQ
Sbjct: 244 RGCEQPLIVRFADPKRPRQ 262
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E ++ LF +G + ++ +++ + +GC F+KY T E+A A+ A++ +H
Sbjct: 93 VPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIRALHNQHT 152
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 153 LPGGVGPIQVRYADGERER 171
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 226 SSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 285
S G GS ++G A LF+ +P+ ++++ F+ G V+ + DK TG +
Sbjct: 70 SGRGGGSPDHLDGGNFAKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQHQGC 129
Query: 286 GFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLK 318
F+ Y + A AI A+ N L G +Q++
Sbjct: 130 CFIKYATSEEADQAIRALHNQHTLPGGVGPIQVR 163
>gi|168041276|ref|XP_001773118.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675665|gb|EDQ62158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K SE E+ LF YG + D+ I+R Q+ S+GCAF+KY ++ A AA+ A+NG H M
Sbjct: 114 LNKQASEKEIEELFIPYGRVDDVYIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIM 173
Query: 62 EGSSVPLVVKWAD 74
+G PL V++AD
Sbjct: 174 QGCDQPLAVRFAD 186
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ ++E EV +F+ +G + ++ I++ + +GC F+KY T E+A A+ A++ +
Sbjct: 23 VPRTITEDEVRPMFAEHGNVLEVAIIKDKRTGNQQGCCFVKYSTVEEAERAIRALHNQKT 82
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 83 LPGGVSPVQVRYADGERER 101
>gi|19909956|dbj|BAB87829.1| bruno-like RNA binding protein [Gallus gallus]
Length = 328
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 56/83 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 19 MISKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 78
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT K+++ +R
Sbjct: 79 MEGCSSPIVVKFADTPKDKEQKR 101
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQEL 258
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ L
Sbjct: 283 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQVL 325
>gi|449462184|ref|XP_004148821.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449511891|ref|XP_004164081.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 675
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K SE EV +FS YG ++D+ ++R + S+GC F+KY ++ ALAA+ A+NG M
Sbjct: 150 LNKQASEKEVKEIFSPYGVVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTM 209
Query: 62 EGSSVPLVVKWADTEKER 79
G PL V++AD +K R
Sbjct: 210 RGCDQPLSVRFADPKKPR 227
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E + LF +G + ++ +++ + +GC F+KY T E+A A+ ++ +H
Sbjct: 59 VPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHT 118
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 119 LPGGVGPIQVRYADGERER 137
>gi|68060659|ref|XP_672317.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489279|emb|CAI01562.1| hypothetical protein PB300271.00.0 [Plasmodium berghei]
Length = 140
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGAN+F++H+P + D EL FQ FG V+SA++ D A G +K +GFVS+ +P SA
Sbjct: 59 GPPGANVFVFHLPSHWTDMELYQHFQHFGYVVSARIQRD-ANGRNKGYGFVSFNNPESAL 117
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
NAI M+G + K + +K+
Sbjct: 118 NAIKGMHGFYVSVKTFESTIKK 139
>gi|67611128|ref|XP_667137.1| RNA binding protein [Cryptosporidium hominis TU502]
gi|54658240|gb|EAL36907.1| RNA binding protein [Cryptosporidium hominis]
Length = 903
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
++ GPPGAN+FI+++P E+ + L F FG +LSA + VDK +G +K FVSY++
Sbjct: 727 EVVGPPGANIFIFNVPYEWDKKSLVGLFCRFGNILSAHLMVDKTSGRNKGVAFVSYDNIH 786
Query: 295 SAQNAIAMMNG-CQLGGKKLKVQLKR 319
SA A+ MNG G+KLKV +K+
Sbjct: 787 SAAEAVNHMNGFITEQGRKLKVSIKQ 812
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
LP+N++E E+ LFS YG I ++ I+R KGCAF+KY KEQ L A+++++G
Sbjct: 412 LPRNITEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALT 471
Query: 61 MEGSSVPLVVKWA 73
+ + P+ V++A
Sbjct: 472 LADVNRPIEVRFA 484
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +YG + ++ ++R S +G A + E+ QA AL +N
Sbjct: 312 VPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALRELNSIKV 371
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 109
++ PL V+++ E ER ++ +P D Q GALP
Sbjct: 372 LDELRGPLKVQYSTGEPERLGFESESC------IPGVD-QVKLFVGALP 413
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF+ +P+ + +L + F+ +GRV++ V +K+TG+ + V+ ES A A A+ +
Sbjct: 307 LFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALREL 366
Query: 304 NGCQLGGKK---LKVQ 316
N ++ + LKVQ
Sbjct: 367 NSIKVLDELRGPLKVQ 382
>gi|71031943|ref|XP_765613.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352570|gb|EAN33330.1| RNA binding protein, putative [Theileria parva]
Length = 280
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 225 SSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 284
+S+ ++ PPG+NLFI+HIP + D EL F FG ++SAK +
Sbjct: 188 ASTSFMSDRNRLNAPPGSNLFIFHIPNVWDDAELSMHFTPFGNLVSAKC------KLLAG 241
Query: 285 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 323
FGFV+Y++P SA A+ +MNG K LKVQ K +N +
Sbjct: 242 FGFVTYDNPISASAAVHLMNGFATHSKILKVQHKSNNNE 280
>gi|126649123|ref|XP_001388078.1| RNA binding protein [Cryptosporidium parvum Iowa II]
gi|126117166|gb|EAZ51266.1| RNA binding protein, putative [Cryptosporidium parvum Iowa II]
Length = 906
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
++ GPPGAN+FI+++P E+ + L F FG +LSA + VDK +G +K FVSY++
Sbjct: 728 EVVGPPGANIFIFNVPYEWDKKSLVGLFCRFGNILSAHLMVDKTSGRNKGVAFVSYDNIH 787
Query: 295 SAQNAIAMMNG-CQLGGKKLKVQLKR 319
SA A+ MNG G+KLKV +K+
Sbjct: 788 SAAEAVNHMNGFITEQGRKLKVSIKQ 813
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
LP+N+ E E+ LFS YG I ++ I+R KGCAF+KY KEQ L A+++++G
Sbjct: 413 LPRNIIEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALT 472
Query: 61 MEGSSVPLVVKWA 73
+ + P+ V++A
Sbjct: 473 LADVNRPIEVRFA 485
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +YG + ++ ++R S +G A + E+ QA AL +N
Sbjct: 313 VPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALRELNSIKV 372
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 109
++ PL V+++ E ER ++ +P D Q GALP
Sbjct: 373 LDELRGPLKVQYSTGEPERLGFESESC------IPGVD-QVKLFVGALP 414
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF+ +P+ + +L + F+ +GRV++ V +K+TG+ + V+ ES A A A+ +
Sbjct: 308 LFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALREL 367
Query: 304 NGCQLGGKK---LKVQ 316
N ++ + LKVQ
Sbjct: 368 NSIKVLDELRGPLKVQ 383
>gi|312384171|gb|EFR28963.1| hypothetical protein AND_02453 [Anopheles darlingi]
Length = 400
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 26/120 (21%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI----- 55
ML K +E +V LFS +G I++ +LR SKGCAF+ + TK+ A++A++ +
Sbjct: 163 MLSKKYNENDVRHLFSGHGVIEECTVLRDPSGLSKGCAFVTFATKQSAISAIKVLFRNSR 222
Query: 56 ----NGKHK-----------------MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 94
N K+K MEG S PLVVK+ADT+KE+ A+R Q+ QS N+
Sbjct: 223 TGRQNVKYKLLPPMHPVMSQLHQSKTMEGCSAPLVVKFADTQKEKDAKRMQQMQSNLWNI 282
>gi|224112006|ref|XP_002316051.1| predicted protein [Populus trichocarpa]
gi|222865091|gb|EEF02222.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 83/173 (47%), Gaps = 38/173 (21%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F+ YG ++D+ ++R + S+GC F+KY ++ ALAA+ +NG + M
Sbjct: 186 LNKQATEKEVEEIFTPYGRVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINGLNGIYTM 245
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 121
G PL V++AD ++ R P DS+ FG+ P G +
Sbjct: 246 RGCEQPLTVRFADPKRPR---------------PGGDSRGGPAFGS-------PGAGPRF 283
Query: 122 QASGSYGLMQYRLPPMQNQP-GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA 173
QASG R PP P G H IPP NA SP NMGP + A
Sbjct: 284 QASG------LRPPPNLGDPMGDH--IPP----NAWLPMSP---QNMGPSSNA 321
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E ++ LF +G + ++ +++ + +GC F+KY T E+A A+ A++ +
Sbjct: 95 VPRTATEMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCFIKYATSEEADRAIRALHNQRT 154
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 155 LPGGVGPIQVRYADGERER 173
>gi|11045077|emb|CAB41488.2| putative FCA orthologue [Brassica napus]
Length = 384
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV LF +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 203 LNKQATENEVEELFLQFGRVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 262
Query: 62 EGSSVPLVVKWADTEK 77
G + PL+V++AD ++
Sbjct: 263 RGCNQPLIVRFADPKR 278
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E EV F +G + ++ ++ + +GC F+KY T E A A+ A++ +
Sbjct: 112 VPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIRALHNQIT 171
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + + V++AD E+ER
Sbjct: 172 LPGGTGLVQVRYADGERER 190
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 300
LF+ +P+ ++E+ F+ G VL DK TG + FV Y + A AI
Sbjct: 105 VKLFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIR 164
Query: 301 AMMNGCQLGGKKLKVQLK 318
A+ N L G VQ++
Sbjct: 165 ALHNQITLPGGTGLVQVR 182
>gi|60459259|gb|AAX20016.1| FCA gamma [Pisum sativum]
Length = 743
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 33/162 (20%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K EV +FS YG ++D+ ++R ++ S+GC F+KY ++ ALAA+ +NG + M
Sbjct: 189 LNKQALVKEVEEVFSKYGRVEDVYLMRDDKKQSRGCGFVKYSHRDMALAAINGLNGIYTM 248
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 121
G PL+V++AD ++ RQ DS+ P L A G+ P + G
Sbjct: 249 RGCDQPLIVRFADPKRPRQ----------------GDSRGPVLGAA---GFGPRLDAPGT 289
Query: 122 QA-SGSYGLMQYRLPPMQ-----NQP--------GFHGIIPP 149
+ S + M R+PP +QP GFHG+ PP
Sbjct: 290 RLPSNNSDPMGDRMPPPNAWRPIHQPNTGPSFNAGFHGMGPP 331
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E ++ LF +G + ++ +++ + +GC F+KY T E+A A+ A++ +H
Sbjct: 98 VPRTATEEDIRPLFEEHGNVIEVALIKDRKTGQHQGCCFIKYATSEEADQAIRALHNQHT 157
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 158 LPGGVGPIQVRYADGERER 176
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 227 SGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 286
SG S +G A LF+ +P+ ++++ F+ G V+ + D+ TG +
Sbjct: 76 SGRGASPDHFDGGNFAKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDRKTGQHQGCC 135
Query: 287 FVSYESPASAQNAI-AMMNGCQLGGKKLKVQLK 318
F+ Y + A AI A+ N L G +Q++
Sbjct: 136 FIKYATSEEADQAIRALHNQHTLPGGVGPIQVR 168
>gi|294877840|ref|XP_002768153.1| hypothetical protein Pmar_PMAR002941 [Perkinsus marinus ATCC 50983]
gi|239870350|gb|EER00871.1| hypothetical protein Pmar_PMAR002941 [Perkinsus marinus ATCC 50983]
Length = 996
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPGAN+F+Y+IP ++ D +L F + G + + KV +D AT SK +GFVS+ SA
Sbjct: 349 GPPGANVFVYNIPGDWKDGDLAREFSSCGSISTTKVIIDNATNHSKGYGFVSFNEVPSAV 408
Query: 298 NAIAMMNGCQL-GGKKLKVQLKR 319
A+ M+G GK+LKVQ+K+
Sbjct: 409 TAVRNMDGFTTHTGKRLKVQIKK 431
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQALAALEAING 57
LP +E + LF YG ++++ ++R G QQT GCAF+K+ +A A++++NG
Sbjct: 16 LPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQT--GCAFVKFGAVHEAATAIKSLNG 73
Query: 58 KHKMEGSSVPLVVKWADTEKER 79
+K + +S + V++A+ E ER
Sbjct: 74 TYKADDASGFVQVQFANGEPER 95
>gi|255539831|ref|XP_002510980.1| zinc finger protein, putative [Ricinus communis]
gi|223550095|gb|EEF51582.1| zinc finger protein, putative [Ricinus communis]
Length = 798
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 13/119 (10%)
Query: 212 SVSPAVANSNP--STSSSGGTGSGGQ-----------IEGPPGANLFIYHIPQEFGDQEL 258
++ P + SNP S+S++GG GS Q I+ NL+I ++P D L
Sbjct: 454 ALGPGSSGSNPPWSSSNTGGLGSANQAGGLGANGVKPIKEYDDTNLYIGYLPPNLDDDGL 513
Query: 259 GNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 317
F AFG ++ AKV D+ TGVSK +GFV Y A NAIA MNG ++ G+ + V++
Sbjct: 514 IGLFSAFGDIVMAKVIKDRVTGVSKGYGFVKYRDIQMANNAIASMNGYRIDGRTIAVRV 572
>gi|18150431|gb|AAL61622.1|AF414188_1 FCA gamma [Brassica napus]
Length = 715
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV LF +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 200 LNKQATENEVEELFLQFGRVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 259
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++AD ++ +
Sbjct: 260 RGCNQPLIVRFADPKRPK 277
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E EV F +G + ++ ++ + +GC F+KY T E A A+ A++ +
Sbjct: 109 VPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIRALHNQIT 168
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + + V++AD E+ER
Sbjct: 169 LPGGTGLVQVRYADGERER 187
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 300
LF+ +P+ ++E+ F+ G VL DK TG + FV Y + A AI
Sbjct: 102 VKLFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIR 161
Query: 301 AMMNGCQLGGKKLKVQLK 318
A+ N L G VQ++
Sbjct: 162 ALHNQITLPGGTGLVQVR 179
>gi|70935538|ref|XP_738840.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56515377|emb|CAH80378.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 135
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
+F++H+P + D EL FQ FG V+SA++ D A G +K +GFVS+ +P SA NAI M
Sbjct: 1 VFVFHLPSHWTDMELYQHFQHFGYVVSARIQRD-ANGRNKGYGFVSFNNPESALNAIKGM 59
Query: 304 NGCQLGGKKLKVQLKR 319
+G + GK LKVQLK+
Sbjct: 60 HGFYVSGKHLKVQLKK 75
>gi|297800520|ref|XP_002868144.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313980|gb|EFH44403.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 52/76 (68%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 225 LNKQATEKEVEEIFLQFGRVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 284
Query: 62 EGSSVPLVVKWADTEK 77
G + PL+V++AD ++
Sbjct: 285 RGCNQPLIVRFADPKR 300
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ E EV F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 134 VPRTAIEEEVRPFFEKHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 193
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 194 LPGGTGPVQVRYADGERER 212
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 300
LF+ +P+ ++E+ F+ G VL + DK TG + FV Y + A AI
Sbjct: 127 VKLFVGSVPRTAIEEEVRPFFEKHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 186
Query: 301 AMMNGCQLGGKKLKVQLK 318
A+ N L G VQ++
Sbjct: 187 ALHNQITLPGGTGPVQVR 204
>gi|19909958|dbj|BAB87830.1| elav-type ribonucleoprotein-3 [Gallus gallus]
Length = 327
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 19 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 78
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 79 MEGCSSPIVVKFADTQKDKE 98
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 25/29 (86%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQEL 258
+ +G Q EGP GANLFIYH+PQEFGDQ++
Sbjct: 296 SAAGSQKEGPEGANLFIYHLPQEFGDQDI 324
>gi|449460564|ref|XP_004148015.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449522952|ref|XP_004168489.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 307
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L KN ++ E+ +FS YG ++D+ I+R + S+G AF+KY ++ ALAA++A+NG M
Sbjct: 95 LNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTM 154
Query: 62 EGSSVPLVVKWADTEKER 79
G PL+V+ AD +K R
Sbjct: 155 RGCDQPLIVRLADPKKPR 172
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 11 VSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 66
+ LF ++G I ++ ILR G QQ G F+KY T +A A+ A++ ++ G
Sbjct: 14 IRPLFEVHGDIVEIVILRDKITGQQQ---GSCFVKYSTSVEADRAIRALDNQYTFPGELT 70
Query: 67 PLVVKWADTEKER 79
P+ VK+AD+EK+R
Sbjct: 71 PINVKYADSEKDR 83
>gi|384248056|gb|EIE21541.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 537
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
NLFI + E L + F+AFG+V+S+K+ VD TG SKC GF+ + P A AI
Sbjct: 119 CNLFIRGVEPEISSIRLQSMFEAFGKVVSSKILVDPKTGASKCAGFLRFTLPEEAARAIH 178
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNKP 326
MNG Q+G K+L V L + P
Sbjct: 179 EMNGKQVGSKRLFVTLAQKRATTDP 203
>gi|124808251|ref|XP_001348269.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23497160|gb|AAN36708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 514
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
+I GP GAN+FI+HIP E+ +L +AF FG ++SA + ++ TG ++ F FVSY++
Sbjct: 397 NEITGPVGANIFIFHIPNEWIQTDLLSAFSPFGNIISAHIATERDTGRNRGFAFVSYDNV 456
Query: 294 ASAQNAIAMMNG 305
SA NA+ MNG
Sbjct: 457 DSAINAVKYMNG 468
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LPK ++E E+ LF+ YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK
Sbjct: 159 LPKEITEEELRELFNRYGNVTEVYIMKNSNGISKRCAFVNYAYKEQGIFAIQNMNGKIAT 218
Query: 62 EGSSVPLVVKWADTEKERQAR 82
E + P+ V++A+T+ + Q +
Sbjct: 219 ENAEKPIEVRFAETKNQLQEK 239
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN++E ++ ++F YG I+D+ ++ + ++ F++ E+ A++ ++GK
Sbjct: 61 IPKNLTEEDIKSIFQEYGNIQDVVFIKDKKPNVNRSNVFVRMESIFYGQKAIKDLHGKRT 120
Query: 61 MEGSSVPLVVKWADTEKER 79
+ + PL+VK+A E E+
Sbjct: 121 LCETLGPLIVKFAIGELEK 139
>gi|255548387|ref|XP_002515250.1| RNA binding protein, putative [Ricinus communis]
gi|223545730|gb|EEF47234.1| RNA binding protein, putative [Ricinus communis]
Length = 564
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 4 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 63
K S+ E+ +FS YG ++D+ I+R + + S+GCAF+K +++A+AA++A++G M G
Sbjct: 232 KQASKQEIEEIFSPYGHVEDVYIVRDNLKQSRGCAFVKLPDRDKAVAAIKALHGTFTMRG 291
Query: 64 SSVPLVVKWADTEKER 79
PL+VK+AD +K R
Sbjct: 292 CDQPLIVKFADPKKRR 307
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 11 VSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 69
+ LF +G+I ++ + R + +G F+KY T E+A A+ A+NG++ + G PL
Sbjct: 148 ICPLFEAHGSIVEVILPRDRRSGQQQGYCFVKYATIEEADRAIRALNGQYTIPGEVHPLK 207
Query: 70 VKWADTEKERQARRAQK 86
V++AD E+ER + K
Sbjct: 208 VRYADRERERLCKVVDK 224
>gi|237844761|ref|XP_002371678.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|211969342|gb|EEB04538.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|221480864|gb|EEE19285.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 274
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT-GVSKCFGFVSYESPASA 296
GPPG+N+F+ ++P E+ D +L FQ FG +LSA+ + + T G S+ FGFVS+++ +A
Sbjct: 163 GPPGSNVFVANLPYEWNDIDLIQHFQHFGNILSAR--IQRGTEGNSRGFGFVSFDNSQAA 220
Query: 297 QNAIAMMNGCQLGGKKLKVQLKR 319
NAI MNG GG+ L+V LK+
Sbjct: 221 VNAIRGMNGFSCGGRYLRVFLKK 243
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+P V+E E +G++ L ++ + +G AF+ YET A A+EA+N KH
Sbjct: 13 IPHTVTEEEFRKKVEEHGSVTALFYMKDQTEGDRGWAFVTYETVYDAQNAIEALNEKHLF 72
Query: 62 EGSSVP-LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
SS P L V++A+ + + Q N P + + PS++ Y P GY
Sbjct: 73 NDSSGPALEVRFANQKPGSNSTSFQ-------NKPASAAPGPSVW----QEYFTP-EGYA 120
Query: 121 YQASGSYGLMQYRLPPMQNQPG 142
Y + S G+ Q+ P ++P
Sbjct: 121 YYYNTSTGVTQWEKPEDFDKPA 142
>gi|291232672|ref|XP_002736280.1| PREDICTED: bruno-2-like [Saccoglossus kowalevskii]
Length = 500
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +F+ +G+I++ +LR +Q SKGCAF+ + +K+ +AL AI KH+
Sbjct: 126 MISKKCNEGDIRLMFAPFGSIEECTVLRDAQGVSKGCAFITFSSKQ---SALNAIQNKHQ 182
Query: 61 ---MEGSSVPLVVKWADTEKERQARRAQK 86
MEG S L V++A+T KER +R +K
Sbjct: 183 SVTMEGCSSSLQVRFAETVKERDQKRMRK 211
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Query: 279 TGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+G+ + GFVSY++P SAQ AI MNG Q+G K+LKVQLK+ ++KPY
Sbjct: 454 SGIQQYAGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKK--SKDKPY 500
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +G + L +LR S+GC F+ Y T++ AL A A++
Sbjct: 39 IPRSMDENDLREFLEEFGPVYQLNVLRDKVTGQSRGCCFVTYYTRKAALQAQNALHNVKT 98
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
M G + +K AD+E + R+
Sbjct: 99 MPGMHHRIQMKPADSENRNEERK 121
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES- 292
GQ P +F+ IP+ + +L + FG V V DK TG S+ FV+Y +
Sbjct: 24 GQQPDPDAIKMFVGQIPRSMDENDLREFLEEFGPVYQLNVLRDKVTGQSRGCCFVTYYTR 83
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
A+ Q A+ N + G ++Q+K + +N+
Sbjct: 84 KAALQAQNALHNVKTMPGMHHRIQMKPADSENR 116
>gi|219116825|ref|XP_002179207.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409098|gb|EEC49030.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 67
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
GANLFI+HIP F + ++ F FG +LS ++ V+K TG S+ FGFVSY+SPASA AI
Sbjct: 1 GANLFIFHIPNHFSNADMYQLFAPFGNLLSVRIMVEKDTGRSRGFGFVSYDSPASAALAI 60
Query: 301 AMMNG 305
+NG
Sbjct: 61 KELNG 65
>gi|325562941|gb|ADZ31338.1| cell size RNA recognition motif 2 [synthetic construct]
Length = 98
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV LF +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 13 LNKQATENEVEELFLQFGRVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 72
Query: 62 EGSSVPLVVKWAD 74
G + PL+V++AD
Sbjct: 73 RGCNQPLIVRFAD 85
>gi|328875992|gb|EGG24356.1| RNA recognition motif-containing protein RRM [Dictyostelium
fasciculatum]
Length = 770
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N+F+ ++P EFGD EL N F FG+V+SAKV VD G S +GFV + SP ++ AI
Sbjct: 88 TNVFVKYLPNEFGDSELHNLFTQFGKVMSAKVMVD-PKGNSYGYGFVRFSSPIESKLAIE 146
Query: 302 MMNGCQLGGKKLKVQL 317
M+G QL KKL +L
Sbjct: 147 TMDGKQLMHKKLLCRL 162
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
NLF++H+P D L F +G + S +V +DK TG +K +GFV +++ A ++
Sbjct: 628 TNLFVFHLPSFVDDVYLYKLFSQYGPLQSVRVIMDKETGENKGYGFVKFQNRDDAVTSLN 687
Query: 302 MMNGCQLGGKKLKVQLK 318
MNG Q+G K LKV+ K
Sbjct: 688 QMNGMQVGQKYLKVKFK 704
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
P NLF+ +P D +L + FQ FG ++ KV VDK G SK GFV +++ A A A
Sbjct: 174 PSNNLFVKPLPATLTDGQLRDLFQGFGEIVECKVMVDKK-GNSKLAGFVRFDNEADATKA 232
Query: 300 IAMMNGCQLGGKKLKVQLKR-DNKQNK 325
I MNG ++G + +K DN+ K
Sbjct: 233 IQAMNGAKMGADSTPLVVKYADNEHQK 259
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LP +++ ++ LF +G I + +++ + SK F++++ + A A++A+NG KM
Sbjct: 183 LPATLTDGQLRDLFQGFGEIVECKVMVDKKGNSKLAGFVRFDNEADATKAIQAMNGA-KM 241
Query: 62 EGSSVPLVVKWADTEKERQARRAQK 86
S PLVVK+AD E ++ R+ +K
Sbjct: 242 GADSTPLVVKYADNEHQKSLRKQRK 266
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
LP V + + LFS YG ++ ++++ + +KG F+K++ ++ A+ +L +NG
Sbjct: 635 LPSFVDDVYLYKLFSQYGPLQSVRVIMDKETGENKGYGFVKFQNRDDAVTSLNQMNG--- 691
Query: 61 MEGSSVPLVVKWADT 75
M+ L VK+ D+
Sbjct: 692 MQVGQKYLKVKFKDS 706
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 134/324 (41%), Gaps = 51/324 (15%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
LP +S E+ ALF YGTI ++L +G F++++ QA A+ A+NGK +
Sbjct: 117 LPPQLSLTELDALFQPYGTIITSKVLTDEDTGAGRGVGFVRFDKYTQAEVAIAALNGK-Q 175
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G + PL+VK+A+ K AN + + + G+ + Y
Sbjct: 176 LVGGTQPLLVKFANPPKAATPLTGTVPGGLANQIMTQTQKRLNNNGSSSSAAS--SMSYT 233
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
GS G M++ IP V SNM P S
Sbjct: 234 STNGGSVGPMRH--------------IPTV--------------SNMRYN----PVSSLP 261
Query: 181 GSGYPAVPGLQYP--MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 238
+G P G+ P M GM P + +++P VA N ST +S G
Sbjct: 262 TAGLPTAAGMVNPAAMAALTGMTTGVP---NLANLAP-VAGGNGSTMTSPGD-------- 309
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P +F+Y++P+ D L F FG + S V D +G+ K +GFV+ +S A +
Sbjct: 310 -PSYCVFVYNLPETCQDFLLYQLFSPFGAITSVNVIRDLKSGLCKRYGFVNMKSYEDACS 368
Query: 299 AIAMMNGCQLGGKKLKVQLKRDNK 322
AI +NG GK L+V K K
Sbjct: 369 AIMTLNGYVHDGKTLQVSFKNQKK 392
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
NL + ++PQ ++ L F FG VLS K+ DK++G+S +GFV+Y S A++AI
Sbjct: 24 TNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYGSAEEAEHAIQ 83
Query: 302 MMNGCQLGGKKLKVQLKR 319
MNG L K LKV R
Sbjct: 84 KMNGTTLESKTLKVSYAR 101
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
AN+++ ++P + EL FQ +G ++++KV D+ TG + GFV ++ A+ AIA
Sbjct: 110 ANVYVANLPPQLSLTELDALFQPYGTIITSKVLTDEDTGAGRGVGFVRFDKYTQAEVAIA 169
Query: 302 MMNGCQLGG 310
+NG QL G
Sbjct: 170 ALNGKQLVG 178
>gi|221060510|ref|XP_002260900.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193810974|emb|CAQ42872.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 497
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
++ GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++
Sbjct: 380 NEVSGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNV 439
Query: 294 ASAQNAIAMMNG 305
SA NA+ MNG
Sbjct: 440 DSAINAVKYMNG 451
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LPK ++E ++ LF+ YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +
Sbjct: 179 LPKEIAEEQIRNLFNRYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAI 238
Query: 62 EGSSVPLVVKWADTEKERQARR 83
E + P+ V++A+T+ + Q ++
Sbjct: 239 ENAEKPIEVRFAETKNQLQEKQ 260
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN++E ++ ++F YG+IKD+ ++ + ++ F++ E+ A A++ ++GK
Sbjct: 81 VPKNLTENDIKSIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQDLHGKKV 140
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLF-GALPMGYAPP---- 115
+ + PL+VK+A E E+ N+ NA+ LF G+LP A
Sbjct: 141 LCETLGPLIVKFAIGELEKYGV----------NMHNANENEAKLFVGSLPKEIAEEQIRN 190
Query: 116 -YNGYG 120
+N YG
Sbjct: 191 LFNRYG 196
>gi|359477208|ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
Length = 785
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +FS YG ++D+ ++R + S+GC F+K+ ++ A+AA+ A+NG + M
Sbjct: 216 LNKQATEKEVKEIFSPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTM 275
Query: 62 EGSSVPLVVKWADTEKER 79
G PL V++AD ++ R
Sbjct: 276 RGCDQPLTVRFADPKRPR 293
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E ++ LF +G + ++ +++ + +GC F+KY T E+A A+ A++ ++
Sbjct: 125 VPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRALHNQYT 184
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 185 LPGGVGPIQVRYADGERER 203
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 300
A LF+ +P+ ++++ F+ G VL + DK TG + F+ Y + A+ AI
Sbjct: 118 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 177
Query: 301 AMMNGCQLGGKKLKVQLK 318
A+ N L G +Q++
Sbjct: 178 ALHNQYTLPGGVGPIQVR 195
>gi|389585865|dbj|GAB68595.1| RNA binding protein, partial [Plasmodium cynomolgi strain B]
Length = 508
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
++ GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++
Sbjct: 391 NEVSGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNV 450
Query: 294 ASAQNAIAMMNG 305
SA NA+ MNG
Sbjct: 451 DSAINAVKYMNG 462
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LPK ++E ++ LF+ YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +
Sbjct: 190 LPKEIAEEQIRNLFNRYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAI 249
Query: 62 EGSSVPLVVKWADTEKERQARR 83
E + P+ V++A+T+ + Q ++
Sbjct: 250 ENAEKPIEVRFAETKNQLQEKQ 271
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E ++ +F YG+IKD+ ++ + ++ F++ E+ A A++ ++GK
Sbjct: 92 IPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQDLHGKKV 151
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLF-GALPMGYAPP---- 115
+ + PL+VK+A E E+ N+ NA+ LF G+LP A
Sbjct: 152 LCETLGPLIVKFAIGELEKYGV----------NMHNANENEAKLFVGSLPKEIAEEQIRN 201
Query: 116 -YNGYG 120
+N YG
Sbjct: 202 LFNRYG 207
>gi|156102324|ref|XP_001616855.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148805729|gb|EDL47128.1| RNA binding protein, putative [Plasmodium vivax]
Length = 507
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
++ GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++
Sbjct: 390 NEVSGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNV 449
Query: 294 ASAQNAIAMMNG 305
SA NA+ MNG
Sbjct: 450 DSAINAVKYMNG 461
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LPK ++E ++ LF+ YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +
Sbjct: 191 LPKEIAEEQIRNLFNRYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAI 250
Query: 62 EGSSVPLVVKWADTEKERQARR 83
E + P+ V++A+T+ + Q ++
Sbjct: 251 ENAEKPIEVRFAETKNQLQEKQ 272
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHK 60
+PK+++E ++ +F YG+IKD+ ++ + ++ F++ E+ A A++ ++GK
Sbjct: 93 IPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQDLHGKKV 152
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLF-GALPMGYAPP---- 115
+ + PL+VK+A E E+ N+ NA+ LF G+LP A
Sbjct: 153 LCETLGPLIVKFAIGELEKYGV----------NMHNANENEAKLFVGSLPKEIAEEQIRN 202
Query: 116 -YNGYG 120
+N YG
Sbjct: 203 LFNRYG 208
>gi|159474566|ref|XP_001695396.1| RNA-binding protein [Chlamydomonas reinhardtii]
gi|158275879|gb|EDP01654.1| RNA-binding protein [Chlamydomonas reinhardtii]
Length = 704
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 4 KNVSEAEVSALFSIYGTIKDLQILRGSQQ--TSKGCAFLKYETKEQALAALEAINGKHKM 61
++ +E EV LFS +G + ++ + R Q T+KGC + ++ALAA+ A++GK
Sbjct: 52 RSTTEEEVRRLFSRFGKVHEVNLFRAFQGAPTTKGCGLVTMLVHDEALAAIGALDGKFVW 111
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNA 97
EG P+VVKW DT +R+ R LP+A
Sbjct: 112 EGMDCPMVVKWMDTALQRRRREQHATTGARTQLPSA 147
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LF+ +IP+ + +L FQ+ G+V+ + DK T SK FV Y + A A+
Sbjct: 317 PDAMKLFVGNIPKSCTEDQLLPLFQSIGKVVELVIVYDKVTHESKGSAFVWYANRADAER 376
Query: 299 AIAMMN 304
AI N
Sbjct: 377 AIIQFN 382
>gi|156083495|ref|XP_001609231.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796482|gb|EDO05663.1| conserved hypothetical protein [Babesia bovis]
Length = 292
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P G NLFI+HIP + D +L F FG ++SAKV D A G + FGFVSY++P SA
Sbjct: 209 PTGTNLFIFHIPGCWTDTDLAMHFTPFGNLVSAKVQKD-ANGANAGFGFVSYDNPQSAAA 267
Query: 299 AIAMMNGCQLGGKKLKVQLKR 319
A+ +M G K LKV+ K+
Sbjct: 268 AVRLMKGYATNSKFLKVEFKK 288
>gi|50942|emb|CAA43691.1| F41 [Mus musculus]
Length = 257
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%)
Query: 14 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 73
+FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+A
Sbjct: 1 MFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFA 60
Query: 74 DTEKERQARR 83
DT+K+++ +R
Sbjct: 61 DTQKDKEQKR 70
>gi|2204091|emb|CAB05389.1| FCA delta [Arabidopsis thaliana]
Length = 533
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 218 LNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 277
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++A+ ++ +
Sbjct: 278 RGCNQPLIVRFAEPKRPK 295
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E E+ F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 127 VPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 186
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 187 LPGGTGPVQVRYADGERER 205
>gi|186511881|ref|NP_193363.4| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658326|gb|AEE83726.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 533
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 218 LNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 277
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++A+ ++ +
Sbjct: 278 RGCNQPLIVRFAEPKRPK 295
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E E+ F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 127 VPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 186
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 187 LPGGTGPVQVRYADGERER 205
>gi|2204096|emb|CAB05392.1| FCA delta [Arabidopsis thaliana]
gi|5302786|emb|CAB46035.1| FCA delta protein [Arabidopsis thaliana]
gi|7268378|emb|CAB78671.1| FCA delta protein [Arabidopsis thaliana]
Length = 533
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 218 LNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 277
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++A+ ++ +
Sbjct: 278 RGCNQPLIVRFAEPKRPK 295
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E E+ F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 127 VPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 186
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 187 LPGGTGPVQVRYADGERER 205
>gi|83273948|ref|XP_729621.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23487965|gb|EAA21186.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana-related
[Plasmodium yoelii yoelii]
Length = 507
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 234 GQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 293
++ GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++
Sbjct: 390 NEVSGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAYIATEKDTGRNRGFAFVSYDNV 449
Query: 294 ASAQNAIAMMNG 305
SA NA+ MNG
Sbjct: 450 DSAINAVKYMNG 461
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 56/82 (68%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LPK++++ ++ +F+ YG +K++ I++ S SK CAF+ Y+ KEQ + A++ +NGK +
Sbjct: 183 LPKDITDDQIRNIFNRYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAI 242
Query: 62 EGSSVPLVVKWADTEKERQARR 83
E + P+ V++A ++ + Q R+
Sbjct: 243 ENAEKPIEVRFAQSKNQLQERQ 264
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN++E ++ +F YG KD+ ++ + ++ F++ E+ A A+E ++GK
Sbjct: 85 IPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFVRMESIYFAQKAIEDLHGKKI 144
Query: 61 MEGSSVPLVVKWADTEKER 79
+ S PL+VK+A E E+
Sbjct: 145 ICESLGPLIVKFAIGELEK 163
>gi|384247531|gb|EIE21017.1| RNA-binding domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 344
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+P++V+E + LF YG I+ + ILR + S GCAF++++ QA A+EA NGK ++
Sbjct: 118 VPRDVTEDTLRPLFEPYGDIEHINILRTHRGQSAGCAFVQFQKWAQAEVAMEAHNGKTRL 177
Query: 62 EGSSVPLVVKWADTEKE 78
S VPLVVK+AD +++
Sbjct: 178 GNSEVPLVVKFADAKRK 194
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+P +V E ++ LF+ +GT+++L +L+GS +GCA + ++ QA AA EA++G+ +
Sbjct: 20 VPSDVREEDLWPLFTPFGTVRNLHMLKGSDGKPRGCAMVLFQRWAQAEAAAEALDGQLVL 79
Query: 62 E--GSSVPLVVKWADTEK 77
E G PLVV +A+ +
Sbjct: 80 ETGGQRKPLVVHFANPRR 97
>gi|300123637|emb|CBK24909.2| unnamed protein product [Blastocystis hominis]
Length = 581
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+P+ + E++ +F +G + ++ I++ T+KG F +Y++++ A A++A+NGK
Sbjct: 60 MIPEGTTLDELTPMFKQFGKLDEIVIIKNGDATAKGYGFCRYDSRDNAFQAIKALNGKTY 119
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ-ANNLPNADSQHPS--LFGALPMGYAPPY 116
+ GS+ LVVK+ADT ++Q R ++ Q++ + P A+ +H + L G P+ Y Y
Sbjct: 120 LHGSTTSLVVKFADTPNQKQNRLLRQKQTKGQDESPIANPKHVNLPLLGNDPLSYEMEY 178
>gi|2204089|emb|CAB05388.1| FCA gamma [Arabidopsis thaliana]
gi|57169178|gb|AAW38964.1| FCA [Arabidopsis thaliana]
Length = 747
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 218 LNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 277
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++A+ ++ +
Sbjct: 278 RGCNQPLIVRFAEPKRPK 295
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E E+ F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 127 VPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 186
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 187 LPGGTGPVQVRYADGERER 205
>gi|186511879|ref|NP_849543.2| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658325|gb|AEE83725.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 747
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 218 LNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 277
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++A+ ++ +
Sbjct: 278 RGCNQPLIVRFAEPKRPK 295
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E E+ F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 127 VPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 186
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 187 LPGGTGPVQVRYADGERER 205
>gi|296083224|emb|CBI22860.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +FS YG ++D+ ++R + S+GC F+K+ ++ A+AA+ A+NG + M
Sbjct: 139 LNKQATEKEVKEIFSPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTM 198
Query: 62 EGSSVPLVVKWADTEKER 79
G PL V++AD ++ R
Sbjct: 199 RGCDQPLTVRFADPKRPR 216
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E ++ LF +G + ++ +++ + +GC F+KY T E+A A+ A++ ++
Sbjct: 48 VPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRALHNQYT 107
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 108 LPGGVGPIQVRYADGERER 126
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 300
A LF+ +P+ ++++ F+ G VL + DK TG + F+ Y + A+ AI
Sbjct: 41 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 100
Query: 301 AMMNGCQLGGKKLKVQLK 318
A+ N L G +Q++
Sbjct: 101 ALHNQYTLPGGVGPIQVR 118
>gi|334302803|sp|O04425.2|FCA_ARATH RecName: Full=Flowering time control protein FCA
gi|2244986|emb|CAB10407.1| FCA gamma protein [Arabidopsis thaliana]
gi|7268377|emb|CAB78670.1| FCA gamma protein [Arabidopsis thaliana]
Length = 747
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 218 LNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 277
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++A+ ++ +
Sbjct: 278 RGCNQPLIVRFAEPKRPK 295
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E E+ F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 127 VPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 186
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 187 LPGGTGPVQVRYADGERER 205
>gi|2204095|emb|CAB05391.1| FCA gamma [Arabidopsis thaliana]
Length = 747
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 218 LNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 277
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++A+ ++ +
Sbjct: 278 RGCNQPLIVRFAEPKRPK 295
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E E+ F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 127 VPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 186
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 187 LPGGTGPVQVRYADGERER 205
>gi|281206149|gb|EFA80338.1| RNA recognition motif-containing protein RRM [Polysphondylium
pallidum PN500]
Length = 640
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N+F+ ++P E+GD EL F FG+V+SAKV VD A G S +GFV + SP+ ++ AI
Sbjct: 69 TNVFVKYLPNEYGDYELFTLFSPFGKVMSAKVMVD-AKGNSYGYGFVRFSSPSESKKAID 127
Query: 302 MMNGCQLGGKKLKVQL 317
M+G QL KKL +L
Sbjct: 128 NMDGFQLMHKKLLCRL 143
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF++H+P D L F FG + S +V DK TG +K +GFV +++ A ++ M
Sbjct: 508 LFVFHLPGFVDDSYLYKLFSRFGPLQSVRVITDKDTGENKGYGFVKFQNKDDAITSLNEM 567
Query: 304 NGCQLGGKKLKVQLK 318
NG Q+G K LKV+LK
Sbjct: 568 NGLQVGQKYLKVKLK 582
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LP +S+ ++ LFS +G I + +++ SK F+++ + A A++A+NG KM
Sbjct: 164 LPATLSDDQLKELFSPFGEILECKVMIDQNGNSKLAGFVRFCNEADATKAMQAMNGT-KM 222
Query: 62 EGSSVPLVVKWADTEKERQARRAQK 86
+ S PLVVK+AD E ++ R+ +K
Sbjct: 223 KDSPAPLVVKYADNEHQKSLRKQRK 247
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
P NLF+ +P D +L F FG +L KV +D+ G SK GFV + + A A A
Sbjct: 155 PSNNLFLKPLPATLSDDQLKELFSPFGEILECKVMIDQ-NGNSKLAGFVRFCNEADATKA 213
Query: 300 IAMMNGCQLGGKKLKVQLKR-DNKQNK 325
+ MNG ++ + +K DN+ K
Sbjct: 214 MQAMNGTKMKDSPAPLVVKYADNEHQK 240
>gi|95007498|emb|CAJ20722.1| RNA-binding protein, putative [Toxoplasma gondii RH]
Length = 399
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT-GVSKCFGFVSYESPASA 296
GPPG+N+F+ ++P E+ D +L FQ FG +LSA+ + + T G S+ FGFVS+++ +A
Sbjct: 163 GPPGSNVFVANLPYEWNDIDLIQHFQHFGNILSAR--IQRGTEGNSRGFGFVSFDNSQAA 220
Query: 297 QNAIAMMNGCQLGGKKLKVQLKR 319
NAI MNG GG+ L+V LK+
Sbjct: 221 VNAIRGMNGFSCGGRYLRVFLKK 243
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+P V+E E +G++ L ++ + +G AF+ YET A A+EA+N KH
Sbjct: 13 IPHTVTEEEFRKKVEEHGSVTALFYMKDQTEGDRGWAFVTYETVYDAQNAIEALNEKHLF 72
Query: 62 EGSSVP-LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
SS P L V++A+ + + Q N P + + PS++ Y P GY
Sbjct: 73 NDSSGPALEVRFANQKPGSNSTSFQ-------NKPASAAPGPSVW----QEYFTP-EGYA 120
Query: 121 YQASGSYGLMQYRLPPMQNQPG 142
Y + S G+ Q+ P ++P
Sbjct: 121 YYYNTSTGVTQWEKPEDFDKPA 142
>gi|297744002|emb|CBI36972.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K S+ E+ +FS YG ++D+ I+R + S+GC F+K ++ A+AA+ A+NG + M
Sbjct: 249 LNKQASKREIEEIFSPYGIVEDIFIVRDDMKQSRGCGFVKLSNRDMAVAAINALNGNYVM 308
Query: 62 EGSSVPLVVKWADTEKER 79
G PL+V++AD +K R
Sbjct: 309 RGCDQPLIVRFADPKKPR 326
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ V+E ++ +LF +G I ++ +L+ + + C F+KY T ++A A++A+N +
Sbjct: 98 VPRTVTEEDIRSLFEEHGKIVEVVLLKDKRTGQQQECCFVKYATMDEADRAIKALNNQRT 157
Query: 61 MEGSSVPLVVKWADTEKERQA 81
+ G + V++AD E+ER A
Sbjct: 158 LPGGVAAIKVRYADGERERLA 178
>gi|359479959|ref|XP_002271329.2| PREDICTED: flowering time control protein FCA-like [Vitis vinifera]
Length = 402
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K S+ E+ +FS YG ++D+ I+R + S+GC F+K ++ A+AA+ A+NG + M
Sbjct: 167 LNKQASKREIEEIFSPYGIVEDIFIVRDDMKQSRGCGFVKLSNRDMAVAAINALNGNYVM 226
Query: 62 EGSSVPLVVKWADTEKER 79
G PL+V++AD +K R
Sbjct: 227 RGCDQPLIVRFADPKKPR 244
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ V+E ++ +LF +G I ++ +L+ + + C F+KY T ++A A++A+N +
Sbjct: 20 VPRTVTEEDIRSLFEEHGKIVEVVLLKDKRTGQQQECCFVKYATMDEADRAIKALNNQRT 79
Query: 61 MEGSSVPLVVKWADTEKERQA 81
+ G + V++AD E+ER A
Sbjct: 80 LPGGVAAIKVRYADGERERLA 100
>gi|332658328|gb|AEE83728.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 672
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 143 LNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 202
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++A+ ++ +
Sbjct: 203 RGCNQPLIVRFAEPKRPK 220
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E E+ F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 52 VPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 111
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 112 LPGGTGPVQVRYADGERER 130
>gi|156101397|ref|XP_001616392.1| poly(A)-binding protein [Plasmodium vivax Sal-1]
gi|148805266|gb|EDL46665.1| poly(A)-binding protein, putative [Plasmodium vivax]
Length = 392
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 131/324 (40%), Gaps = 61/324 (18%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
P E ++ F I+GTI ++ I + A++++ E A+E +NGK
Sbjct: 25 FPSEWMENDIKKNFMIFGTINNVIIDKDINMY----AYIQFHDGEACQKAMEVMNGK--- 77
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 121
E S L V +E A K ++ PN++++ +LF
Sbjct: 78 EVSGKVLKVTARKVVEECMDMNATKIEAPQKTQPNSENKKTTLF---------------- 121
Query: 122 QASGSYGLMQYRLPPMQN-QPGFHGIIPPVNQGNAMRGASPDLSSN-MGPRNYAMPPSGF 179
+ LPP N Q F N +A D +S G Y P S
Sbjct: 122 ---------VFYLPPHWNDQDLFDKFKTFGNLESATVAKKNDKTSKGYGFVVYTDPHSAA 172
Query: 180 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGP 239
+ A+ + Y G L + L SS S +I+
Sbjct: 173 M-----AISNMNKVEVYTGKRL--KVL-----------------LKSSSNENSKKKIK-- 206
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
PG +F++++P ++ D++L F +G +L A + + G S+ +GF+++E+ SA NA
Sbjct: 207 PGCTIFVFYLPNDWSDKDLKRHFSHYGNILGATI-KRETNGKSRGYGFINFENQQSAINA 265
Query: 300 IAMMNGCQLGGKKLKVQLKRDNKQ 323
+A MNG G K LKV +K+ +Q
Sbjct: 266 VAGMNGFNAGNKYLKVSIKKGEEQ 289
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LF++++P + DQ+L + F+ FG + SA V K SK +GFV Y P SA AI+ M
Sbjct: 120 LFVFYLPPHWNDQDLFDKFKTFGNLESATV-AKKNDKTSKGYGFVVYTDPHSAAMAISNM 178
Query: 304 NGCQL-GGKKLKVQLKRDNKQN 324
N ++ GK+LKV LK + +N
Sbjct: 179 NKVEVYTGKRLKVLLKSSSNEN 200
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
+F+Y+ P E+ + ++ F FG + V +DK + + ++ + + Q A+ +M
Sbjct: 20 IFVYNFPSEWMENDIKKNFMIFGTI--NNVIIDKDINM---YAYIQFHDGEACQKAMEVM 74
Query: 304 NGCQLGGKKLKVQLKR 319
NG ++ GK LKV ++
Sbjct: 75 NGKEVSGKVLKVTARK 90
>gi|55729085|emb|CAH91279.1| hypothetical protein [Pongo abelii]
Length = 360
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S +VVK+ADT+K+++
Sbjct: 198 MEGCSSSIVVKFADTQKDKE 217
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
>gi|302818861|ref|XP_002991103.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
gi|300141197|gb|EFJ07911.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
Length = 509
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K+ SE E+ +FS YG + D+ ++R + S+GCAF+KY +++ A AA+ A+N + M
Sbjct: 143 LNKHASEREIEEVFSPYGRVDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDVYIM 202
Query: 62 EGSSVPLVVKWADTEK 77
G PL V++AD ++
Sbjct: 203 RGCDQPLAVRFADPKR 218
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQALAALEAING 57
+P+ ++E +V ++F YG + ++ I++ G QQ C F+KY ++++A A+ +N
Sbjct: 49 VPRTITEQQVRSMFEEYGEVLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADRAIRCLNN 108
Query: 58 KHKMEGSSVPLVVKWADTEKER 79
+ + G + P+ V++AD E+ER
Sbjct: 109 QRTLPGGASPVQVRYADGERER 130
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 205 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQA 264
P + P S S VA +S + G LF+ +P+ +Q++ + F+
Sbjct: 9 PHHGDPSSSSWRVAGHKRERDNSDSSEGGQHTY----VKLFVGSVPRTITEQQVRSMFEE 64
Query: 265 FGRVLSAKVFVDKATGVSK---CFGFVSYESPASAQNAIAMMN 304
+G VL + D+ TG + C FV Y S A AI +N
Sbjct: 65 YGEVLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADRAIRCLN 107
>gi|293333224|ref|NP_001169298.1| uncharacterized protein LOC100383162 [Zea mays]
gi|224028499|gb|ACN33325.1| unknown [Zea mays]
gi|414588978|tpg|DAA39549.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 735
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +F+ YG ++D+ I+R S + S+GC F+K+ +KE A+ A+ A++G + M
Sbjct: 220 LNKQATPKEIEEIFAPYGHVEDVYIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTM 279
Query: 62 EGSSVPLVVKWADTEKER 79
G PL++++AD ++ R
Sbjct: 280 RGCEQPLIIRFADPKRPR 297
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E +V LF +G + ++ +++ + +GC F+KY T E+A A+ ++ +
Sbjct: 129 VPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYATSEEAERAIRGLHNHYT 188
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+ P+ V++AD E+ER
Sbjct: 189 LPGAMGPIQVRYADGERER 207
>gi|302819965|ref|XP_002991651.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
gi|300140500|gb|EFJ07222.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
Length = 480
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K+ SE E+ +FS YG + D+ ++R + S+GCAF+KY +++ A AA+ A+N + M
Sbjct: 144 LNKHASEREIEEVFSPYGRVDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDVYIM 203
Query: 62 EGSSVPLVVKWADTEK 77
G PL V++AD ++
Sbjct: 204 RGCDQPLAVRFADPKR 219
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQALAALEAING 57
+P+ ++E +V ++F YG + ++ I++ G QQ C F+KY ++++A A+ +N
Sbjct: 49 VPRTITEQQVRSMFEEYGEVLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADRAIRCLNN 108
Query: 58 KHKMEGSSVPLVVKWADTEKERQA 81
+ + G + P+ V++AD E+ER A
Sbjct: 109 QRTLPGGASPVQVRYADGERERLA 132
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 205 PLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQA 264
P + P S S VA +S + G LF+ +P+ +Q++ + F+
Sbjct: 9 PHHGDPSSSSWRVAGHKRERDNSDSSEGGQHTY----VKLFVGSVPRTITEQQVRSMFEE 64
Query: 265 FGRVLSAKVFVDKATGVSK---CFGFVSYESPASAQNAIAMMN 304
+G VL + D+ TG + C FV Y S A AI +N
Sbjct: 65 YGEVLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADRAIRCLN 107
>gi|387196968|gb|AFJ68786.1| elav-like protein 2, partial [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
NL + ++P E D L FQ FG+V SA+V +K +G S +GFV Y+ P SA +AI
Sbjct: 117 NLIVNYLPNEIDDMGLRELFQDFGQVESARVIREKGSGRSLGYGFVKYKDPQSADSAILT 176
Query: 303 MNGCQLGGKKLKVQLKR----DNKQNKPY 327
NG Q+ GK++KV + R ++K K Y
Sbjct: 177 RNGHQVYGKRIKVSVARPASEEHKHTKLY 205
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQIL-RGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LP + ++AEV LF+ +G I + ++L + +G AF++Y T+++A AA+ +++
Sbjct: 209 LPHHFTKAEVIQLFAPHGRIIECRLLMEANSGRFRGIAFVQYNTRQEAAAAIRSLH-DTP 267
Query: 61 MEGSSVPLVVKWADTEKE 78
MEG PL+VK AD + +
Sbjct: 268 MEGVPRPLIVKLADDKGD 285
>gi|399152199|emb|CCI89170.1| elav protein, partial [Sepia officinalis]
Length = 171
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 46/78 (58%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
NL I +IPQ D+E + F + G + SAK+ DKATG S FGFV YE AQ A+
Sbjct: 1 TNLIINYIPQTLTDEEFRSMFLSIGPIKSAKIVRDKATGYSYGFGFVDYEKVEDAQRAMQ 60
Query: 302 MMNGCQLGGKKLKVQLKR 319
+NG Q+ K +KV L R
Sbjct: 61 TLNGLQMQNKTIKVALAR 78
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
E GANL++ ++P+ + +L FQ FG ++ ++V D+ TG SK GFV ++ A
Sbjct: 82 EEIKGANLYVRNLPRHYQQMDLERLFQRFGTIIQSRVLTDQTTGQSKGVGFVLFDQKKQA 141
Query: 297 QNAIAMMNGC 306
+ AI+ ++G
Sbjct: 142 EEAISQISGT 151
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
LP++ + ++ LF +GTI ++L + QT SKG F+ ++ K+QA A+ I+G
Sbjct: 94 LPRHYQQMDLERLFQRFGTIIQSRVL--TDQTTGQSKGVGFVLFDQKKQAEEAISQISGT 151
Query: 59 HKMEGSSVPLVVKWAD 74
G+ PL++K+AD
Sbjct: 152 VPAGGTE-PLLIKFAD 166
>gi|414588979|tpg|DAA39550.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 708
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +F+ YG ++D+ I+R S + S+GC F+K+ +KE A+ A+ A++G + M
Sbjct: 220 LNKQATPKEIEEIFAPYGHVEDVYIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTM 279
Query: 62 EGSSVPLVVKWADTEKER 79
G PL++++AD ++ R
Sbjct: 280 RGCEQPLIIRFADPKRPR 297
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E +V LF +G + ++ +++ + +GC F+KY T E+A A+ ++ +
Sbjct: 129 VPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYATSEEAERAIRGLHNHYT 188
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+ P+ V++AD E+ER
Sbjct: 189 LPGAMGPIQVRYADGERER 207
>gi|281211191|gb|EFA85357.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 515
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
MLP+ E ++ LF+ YG ++D+ +LRG+ SKGC F++++ +E L+A+ A+NG +
Sbjct: 98 MLPRTYQEDDIKTLFADYGEVEDICLLRGNNNESKGCGFIRFQNRESCLSAISALNGIN- 156
Query: 61 MEGSSVPLVVKWADTE 76
+ S LVVK+ADTE
Sbjct: 157 LPPSPNNLVVKFADTE 172
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 2 LPKNVSEAEVSALFSIY-GTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKH 59
+PK+ +E + ++F+ Y G+I+++ ++R Q +GCAF+ +K+ A A++ ++
Sbjct: 10 IPKSFNEDNLKSMFADYEGSIQEISVIRNKQTNEPQGCAFVTLSSKDDAEKAIQTLHSSK 69
Query: 60 KMEGSSVPLVVKWADTEKERQARR 83
K G S L VK+AD+E+E+Q+ +
Sbjct: 70 KFPGVSNSLQVKYADSEQEKQSTK 93
>gi|337278094|ref|YP_004617565.1| RNA-binding protein [Ramlibacter tataouinensis TTB310]
gi|334729170|gb|AEG91546.1| Candidate RNA-binding protein [Ramlibacter tataouinensis TTB310]
Length = 95
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G L++ ++P FGD E+ AF FG V SAKV +D+ TG SK FGFV S A AQ+AI
Sbjct: 2 GNKLYVGNLPYSFGDSEMQQAFSQFGTVGSAKVVMDRDTGRSKGFGFVEMGSAAEAQSAI 61
Query: 301 AMMNGCQLGGKKLKVQLKR 319
M+G Q GG+ L V R
Sbjct: 62 QGMHGQQHGGRDLVVNEAR 80
>gi|355754997|gb|EHH58864.1| CUGBP Elav-like family member 4, partial [Macaca fascicularis]
Length = 373
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 27/116 (23%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS---------------------------QQTS 34
+P+N+ E ++ LF +G I +L +L+ +Q
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKMNRPIQVKPADSESRGGSSCLRQPP 120
Query: 35 KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
GCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 121 SGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 176
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAF 265
EGP G NLFIYH+PQEFGD EL F F
Sbjct: 345 EGPEGCNLFIYHLPQEFGDAELMQMFLPF 373
>gi|159164251|pdb|2DNH|A Chain A, Solution Structure Of Rna Binding Domain In Bruno-Like 5
Rna Binding Protein
Length = 105
Score = 71.2 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 22 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 81
Query: 61 MEGSSVPLVVKWADTEKE 78
M G+S LVVK+ADT+KE
Sbjct: 82 MPGASSSLVVKFADTDKE 99
>gi|68069003|ref|XP_676412.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496097|emb|CAH95360.1| conserved hypothetical protein [Plasmodium berghei]
Length = 506
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++ SA
Sbjct: 393 GPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAYIATEKDTGRNRGFAFVSYDNVDSAI 452
Query: 298 NAIAMMNG 305
NA+ MNG
Sbjct: 453 NAVKYMNG 460
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 56/82 (68%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LPK++++ ++ +F+ YG +K++ I++ S SK CAF+ Y+ KEQ + A++ +NGK +
Sbjct: 183 LPKDITDDQIRNIFNRYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAI 242
Query: 62 EGSSVPLVVKWADTEKERQARR 83
E + P+ V++A ++ + Q R+
Sbjct: 243 ENAEKPIEVRFAQSKNQLQERQ 264
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQ-QTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN++E ++ +F YG KD+ ++ + ++ F++ E+ A A+E ++GK
Sbjct: 85 IPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFVRMESIYFAQKAIEDLHGKKI 144
Query: 61 MEGSSVPLVVKWADTEKER 79
+ S PL+VK+A E E+
Sbjct: 145 ICESLGPLIVKFAIGELEK 163
>gi|283838931|gb|ADB44797.1| FCA [Vitis vinifera]
Length = 281
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +FS YG ++D+ ++R + S+GC F+ + ++ A+AA+ A+NG + M
Sbjct: 200 LNKQATEKEVKEIFSPYGQVEDVYLMRDELKQSRGCGFVNFSHRDMAMAAINALNGIYTM 259
Query: 62 EGSSVPLVVKWADTEKER 79
+G PL V++AD ++ R
Sbjct: 260 KGCDQPLTVRFADPKRPR 277
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E ++ LF +G + ++ +++ + +GC F+KY T E+A A+ A++ ++
Sbjct: 109 VPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRALHNQYT 168
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G P+ V++AD E+ER
Sbjct: 169 LPGGVGPIEVRYADGERER 187
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
A LF+ +P+ ++++ F+ G VL + DK TG + F+ Y + A+ AI
Sbjct: 102 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 161
Query: 302 MMN 304
++
Sbjct: 162 ALH 164
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G L++ ++P + D ++ AF FG V SAKV +++ TG SK FGFV SPA AQ AI
Sbjct: 2 GNKLYVGNLPYSYRDSDMEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAAI 61
Query: 301 AMMNGCQLGGKKLKVQLKR 319
MNG Q+GG+ L V R
Sbjct: 62 EGMNGQQIGGRGLVVNEAR 80
>gi|325296731|ref|NP_001191601.1| ELAV 2-like protein [Aplysia californica]
gi|65307079|gb|AAY42042.1| ELAV 2-like protein [Aplysia californica]
Length = 325
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ NL I ++PQ D+E + F + G V S+K+ DK+TG S FGFV ++ P
Sbjct: 12 VDDSSSTNLIINYLPQTLTDEEFRSMFLSVGPVKSSKIVRDKSTGYSYGFGFVDFQHPTD 71
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKR 319
AQ AI ++G QL K++KV L R
Sbjct: 72 AQRAIETLSGLQLQNKRIKVALAR 95
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
G QI+G ANL+I ++P + + EL F+ +G+++ ++V VD +TG+SK GFV Y++
Sbjct: 98 GDQIKG---ANLYIRNLPVAWKETELNKIFEPYGKIIQSRVLVDLSTGISKRVGFVLYDT 154
Query: 293 PASAQNAIAMMNG 305
A+NAI ++G
Sbjct: 155 RDEAENAIKCLSG 167
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%)
Query: 221 NPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 280
NP + G G G G LF+Y+I D+ L F FG V + +D
Sbjct: 220 NPMAGNFNGQGPGMPQAQQGGYTLFVYNIGFNATDRTLWQLFSPFGTVQKVNIMLDHEKN 279
Query: 281 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 322
K +GFV+ + AQNAI +NG G+ L+V K N+
Sbjct: 280 QCKGYGFVTMTNYQEAQNAINCLNGYFFQGRVLQVSFKGQNQ 321
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
LP E E++ +F YG I ++L S SK F+ Y+T+++A A++ ++GK
Sbjct: 111 LPVAWKETELNKIFEPYGKIIQSRVLVDLSTGISKRVGFVLYDTRDEAENAIKCLSGKVP 170
Query: 61 MEGSSVPLVVKWADTEKER 79
EG++ +++K+AD ++
Sbjct: 171 -EGATEAIMIKFADDNSKK 188
>gi|34555648|gb|AAQ74972.1| flowering time control protein isoform OsFCA-2 [Oryza sativa Indica
Group]
Length = 649
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +F+ YG ++D+ I++ + S+GC F+K+ ++E ALAA+ A++G + M
Sbjct: 220 LNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVM 279
Query: 62 EGSSVPLVVKWADTEKER 79
G PL++++AD ++ R
Sbjct: 280 RGCEQPLIIRFADPKRPR 297
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E +V LF +G + ++ +++ + +GC F+KY T E+A A+ A++ ++
Sbjct: 129 VPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYT 188
Query: 61 MEGSSVPLVVKWADTEKERQ 80
+ G+ P+ V++AD E+ER
Sbjct: 189 LPGAMGPIQVRYADGERERH 208
>gi|118379755|ref|XP_001023043.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila]
gi|89304810|gb|EAS02798.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila
SB210]
Length = 474
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++GP +N+F++H+P+++ ++ L F +G ++S + K G S+ +GFVS+ P
Sbjct: 376 VQGPSHSNIFVFHLPKQYNEKNLFELFSGYGNIISITI-CRKQNGESRGYGFVSFNQPYE 434
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKR 319
A +AI +NG L GK++KV+LK+
Sbjct: 435 AAHAIKELNGLNLMGKRIKVELKQ 458
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+PK+ E+++ F + +I ++++R + +GCAF + + +A +E KH
Sbjct: 102 VPKDWQESDLKIFFEKHTSITQIEVIRDQKFRHQGCAFATFSSMSEAEKVIEFYKNKH-F 160
Query: 62 EGSSVPLVVKWADTEKER 79
S +++KWA E+ER
Sbjct: 161 PNSKQEIIMKWASGEEER 178
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
L I ++P D + N F FGR+ KV DK T K F+ Y SA A+ +
Sbjct: 189 LIIKNLPALISDASISNIFDNFGRIQQLKVIRDKKTSECKGHAFIKYYEKESAHLAVQNL 248
Query: 304 NGCQ---LGGKKLKVQLKRDNKQNK 325
N + KKLKV + Q K
Sbjct: 249 NKQNIYLIQNKKLKVSFIEKSYQKK 273
>gi|50725240|dbj|BAD34210.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
Length = 546
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +F+ YG ++D+ I++ + S+GC F+K+ ++E ALAA+ A++G + M
Sbjct: 28 LNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVM 87
Query: 62 EGSSVPLVVKWADTEKER 79
G PL++++AD ++ R
Sbjct: 88 RGCEQPLIIRFADPKRPR 105
>gi|218201679|gb|EEC84106.1| hypothetical protein OsI_30426 [Oryza sativa Indica Group]
Length = 758
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +F+ YG ++D+ I++ + S+GC F+K+ ++E ALAA+ A++G + M
Sbjct: 220 LNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVM 279
Query: 62 EGSSVPLVVKWADTEKER 79
G PL++++AD ++ R
Sbjct: 280 RGCEQPLIIRFADPKRPR 297
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E +V LF +G + ++ +++ + +GC F+KY T E+A A+ A++ ++
Sbjct: 129 VPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYT 188
Query: 61 MEGSSVPLVVKWADTEKERQ 80
+ G+ P+ V++AD E+ER
Sbjct: 189 LPGAMGPIQVRYADGERERH 208
>gi|33390912|gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [Oryza sativa Indica
Group]
gi|47496990|dbj|BAD20100.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
gi|50261763|gb|AAT72462.1| FCA gamma protein [Oryza sativa Japonica Group]
gi|58003966|gb|AAW62371.1| FCA [Oryza sativa Japonica Group]
Length = 738
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +F+ YG ++D+ I++ + S+GC F+K+ ++E ALAA+ A++G + M
Sbjct: 220 LNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVM 279
Query: 62 EGSSVPLVVKWADTEKER 79
G PL++++AD ++ R
Sbjct: 280 RGCEQPLIIRFADPKRPR 297
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E +V LF +G + ++ +++ + +GC F+KY T E+A A+ A++ ++
Sbjct: 129 VPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYT 188
Query: 61 MEGSSVPLVVKWADTEKERQ 80
+ G+ P+ V++AD E+ER
Sbjct: 189 LPGAMGPIQVRYADGERERH 208
>gi|34555650|gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [Oryza sativa Indica
Group]
Length = 626
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +F+ YG ++D+ I++ + S+GC F+K+ ++E ALAA+ A++G + M
Sbjct: 119 LNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVM 178
Query: 62 EGSSVPLVVKWADTEKER 79
G PL++++AD ++ R
Sbjct: 179 RGCEQPLIIRFADPKRPR 196
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E +V LF +G + ++ +++ + +GC F+KY T E+A A+ A++ ++
Sbjct: 28 VPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYT 87
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+ P+ V++AD E+ER
Sbjct: 88 LPGAMGPIQVRYADGERER 106
>gi|159164256|pdb|2DNO|A Chain A, Solution Structure Of Rna Binding Domain In
Trinucleotide Repeat Containing 4 Variant
Length = 102
Score = 70.9 bits (172), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 19 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 78
Query: 61 MEGSSVPLVVKWADTEKE 78
+ G+S LVVK+ADTEKE
Sbjct: 79 LPGASSSLVVKFADTEKE 96
>gi|391333252|ref|XP_003741033.1| PREDICTED: ELAV-like protein 2-like [Metaseiulus occidentalis]
Length = 409
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
E P +NL + ++PQ+ DQE + F GR+ + K+ +K TG S FGFV Y P A
Sbjct: 11 EVPSSSNLIVNYLPQKLSDQEFYDLFGQIGRIKTCKIVRNKLTGYSYGFGFVDYHDPEDA 70
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQN 324
+ AI + NG ++ K LKV + + + N
Sbjct: 71 KKAIGVYNGFKMNNKTLKVAIAKPSNSN 98
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 60
+PKN E+ LF +G + ++LR S +KG AF Y+ KE A A++ ++GK
Sbjct: 110 VPKNFDPDELENLFGTFGRLVQFRVLRDLSTNVNKGVAFALYDDKENADRAIQDMDGK-T 168
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G + PL VK AD + + + R + Q
Sbjct: 169 LNGGTEPLQVKIADDQMKLKKHRQMTSYEQ 198
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N++I +P+ F EL N F FGR++ +V D +T V+K F Y+ +A AI
Sbjct: 103 TNVYIRGVPKNFDPDELENLFGTFGRLVQFRVLRDLSTNVNKGVAFALYDDKENADRAIQ 162
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNK 325
M+G L G +Q+K + Q K
Sbjct: 163 DMDGKTLNGGTEPLQVKIADDQMK 186
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPP LF+Y+I E D L F +G V A V DK T SK +GFV+ + A
Sbjct: 267 GPP--ILFVYNIGMETDDPSLVQLFSQYGTVEKAAVVRDKMTTKSKGYGFVTMPNYNEAL 324
Query: 298 NAIAMMNGCQLGGKKLKVQLK 318
AI +NG Q GK L+V K
Sbjct: 325 WAIDQLNGFQYAGKPLQVSFK 345
>gi|401397236|ref|XP_003880014.1| putative RNA recognition motif domain-containing protein [Neospora
caninum Liverpool]
gi|325114422|emb|CBZ49979.1| putative RNA recognition motif domain-containing protein [Neospora
caninum Liverpool]
Length = 298
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
GPPG+N+F+ ++ E+ D +L FQ FG +LSA++ G S+ FGFVS+++P +A
Sbjct: 153 GPPGSNVFVANLSYEWNDIDLIQHFQHFGNILSARI-QRGMEGNSRGFGFVSFDNPQAAV 211
Query: 298 NAIAMMNGCQLGGKKLKVQLKR 319
NAI MNG GG+ ++V LK+
Sbjct: 212 NAIRGMNGFSCGGRFMRVFLKK 233
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKH-- 59
+P V+E E+ +GT+ L ++ +G AF+ YET A A+EA+N K
Sbjct: 13 IPHTVTEEELRKKAEEHGTVTALFYMKDQTAGDRGWAFVTYETVYDAQNAIEALNEKRPF 72
Query: 60 KMEGSSVPLVVKWADTEKERQARRAQK---AQSQANNLPNADSQHPSLFGALPMGYAPPY 116
+ S L V++A+ + + Q A S A + N ++ SL A P P +
Sbjct: 73 SQDDSGPALEVRFANQKPSSNSSTFQNKPAATSTAQSAQNG--KNTSLLKATPTTTTPYF 130
>gi|115478012|ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group]
gi|34555646|gb|AAQ74971.1| flowering time control protein isoform OsFCA-3 [Oryza sativa Indica
Group]
gi|113630834|dbj|BAF24515.1| Os09g0123200 [Oryza sativa Japonica Group]
Length = 637
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +F+ YG ++D+ I++ + S+GC F+K+ ++E ALAA+ A++G + M
Sbjct: 119 LNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVM 178
Query: 62 EGSSVPLVVKWADTEKER 79
G PL++++AD ++ R
Sbjct: 179 RGCEQPLIIRFADPKRPR 196
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E +V LF +G + ++ +++ + +GC F+KY T E+A A+ A++ ++
Sbjct: 28 VPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYT 87
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G+ P+ V++AD E+ER
Sbjct: 88 LPGAMGPIQVRYADGERER 106
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NL++ ++ E+ D++L N F FG + S KV D+ G SK FGFV + SP A A+
Sbjct: 456 GVNLYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKDE-KGTSKGFGFVCFSSPDEATKAV 514
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNK 325
A MNG LG K L V L + + K
Sbjct: 515 AEMNGKMLGSKPLYVSLAQRKEVRK 539
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+FI ++ + ++ L + F AFG +LS KV D+ G SK +GFV Y + SA+ AI
Sbjct: 262 NIFIKNLDETIDNKALHDTFAAFGDILSCKVATDE-HGASKGYGFVHYVTGESAEAAIKG 320
Query: 303 MNGCQLGGKKLKV--QLKRDNKQNK 325
+NG QL K + V + R ++Q K
Sbjct: 321 VNGMQLNDKVVFVGIHVPRRDRQAK 345
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 15 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 74
F+ +GTI ++++ + TSKG F+ + + ++A A+ +NG KM GS PL V A
Sbjct: 477 FTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNG--KMLGSK-PLYVSLAQ 533
Query: 75 TEKER----QARRAQKAQSQANNL 94
++ R +A+ +Q++Q ++ +
Sbjct: 534 RKEVRKQQLEAQMSQRSQMRSQQI 557
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
NL+I ++P E +EL F FG + SA V D+ G + FGFV+YE+ SA A+
Sbjct: 354 TNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDE-HGKHRGFGFVNYENHESASKAVD 412
Query: 302 MMNGCQLGGKKLKV-----------QLKRDNKQNK 325
++ G L V +LK+ ++Q K
Sbjct: 413 ALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQK 447
>gi|357155243|ref|XP_003577055.1| PREDICTED: flowering time control protein FCA-like [Brachypodium
distachyon]
Length = 749
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +FS +G ++D+ I++ + S+GC F+K+ +KE ALAA+ +++G + M
Sbjct: 225 LNKQATAKEIEEIFSPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYVM 284
Query: 62 EGSSVPLVVKWADTEKER 79
G PL+V++AD ++ R
Sbjct: 285 RGCEQPLIVRFADPKRPR 302
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E +V LF+ +G + ++ ++R + +GC F+KY T E+A A+ A++ +
Sbjct: 134 VPRTANEDDVRPLFADHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRALHNQCT 193
Query: 61 MEGSSVPLVVKWADTEKERQ 80
+ G+ P+ V++AD EKER
Sbjct: 194 IPGAMGPVQVRYADGEKERH 213
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 302
LF+ +P+ + ++ F G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 129 LFVGSVPRTANEDDVRPLFADHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 188
Query: 303 MNGCQLGGKKLKVQLK 318
N C + G VQ++
Sbjct: 189 HNQCTIPGAMGPVQVR 204
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NL++ ++ E+ D++L N F FG + S KV D+ G SK FGFV + SP A A+
Sbjct: 367 GVNLYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKDE-KGTSKGFGFVCFSSPDEATKAV 425
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNK 325
A MNG LG K L V L + + K
Sbjct: 426 AEMNGKMLGSKPLYVSLAQRKEVRK 450
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+FI ++ + ++ L + F AFG +LS KV D+ G SK +GFV Y + SA+ AI
Sbjct: 173 NIFIKNLDETIDNKALHDTFAAFGDILSCKVATDE-HGASKGYGFVHYVTGESAEAAIKG 231
Query: 303 MNGCQLGGKKLKV--QLKRDNKQNK 325
+NG QL K + V + R ++Q K
Sbjct: 232 VNGMQLNDKVVFVGIHVPRRDRQAK 256
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 15 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 74
F+ +GTI ++++ + TSKG F+ + + ++A A+ +NG KM GS PL V A
Sbjct: 388 FTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNG--KMLGSK-PLYVSLAQ 444
Query: 75 TEKER----QARRAQKAQSQANNL 94
++ R +A+ +Q++Q ++ +
Sbjct: 445 RKEVRKQQLEAQMSQRSQMRSQQI 468
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
NL+I ++P E +EL F FG + SA V D+ G + FGFV+YE+ SA A+
Sbjct: 265 TNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDE-HGKHRGFGFVNYENHESASKAVD 323
Query: 302 MMNGCQLGGKKLKV-----------QLKRDNKQNK 325
++ G L V +LK+ ++Q K
Sbjct: 324 ALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQK 358
>gi|302832507|ref|XP_002947818.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
gi|300267166|gb|EFJ51351.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
Length = 1966
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 4 KNVSEAEVSALFSIYGTIKDLQILRGSQ--QTSKGCAFLKYETKEQALAALEAINGKHKM 61
++ +E +V LFS +G + D+ + R Q T+KGC + A+AA+ A++G H
Sbjct: 241 RSTTEDDVRRLFSRFGKVYDINLFRAFQGAPTTKGCGLVTMSQHSDAVAAIAALDGIHVW 300
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNA 97
EG P+VVKW DT +R+ R A + LP++
Sbjct: 301 EGMDCPMVVKWMDTALQRRRREQHLANIRQTPLPSS 336
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 8 EAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 66
E E+ +LF YG ++ + + + + SKGC F++ T+E A+AA+E ++ +H + +
Sbjct: 146 EDEILSLFLAYGEVETINVFKCRRSGRSKGCGFIEMRTREAAIAAMENLDERHVFDSTGT 205
Query: 67 PLVVKWADTEKERQARRAQKAQSQAN 92
+ V+WAD + + +R +KA AN
Sbjct: 206 AISVRWADPDLQ---QRKKKAMDDAN 228
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 24/183 (13%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ EA + F G ++DL +LR S+GCAF+ Y T E+A AA++ + +
Sbjct: 37 VPRTAVEATLREYFEQCGVVRDLAVLRDRTSGKSRGCAFVSYLTLEEAEAAIQKFDRQLM 96
Query: 61 MEGSSVPLVVKWADTEKERQA------------RRAQKAQSQANNLPNADSQHPSLFGAL 108
+ GS PL V++A QA R +++ + + SLF L
Sbjct: 97 LPGSQTPLEVRFAKNHSYVQAGEGPSGNRQIFFSRVPLTLKVCHHVAYEEDEILSLF--L 154
Query: 109 PMGYAPPYNGYGYQASGS---YGLMQYR-----LPPMQNQPGFHGIIPPVNQGNAMRGAS 160
G N + + SG G ++ R + M+N H + ++R A
Sbjct: 155 AYGEVETINVFKCRRSGRSKGCGFIEMRTREAAIAAMENLDERH-VFDSTGTAISVRWAD 213
Query: 161 PDL 163
PDL
Sbjct: 214 PDL 216
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P LFI +IP+ ++ L FQ+ G+V+ + DK T K FV Y + A+
Sbjct: 518 PDVVKLFIGNIPRGCTEKHLLALFQSIGKVVELVIMYDKVTREPKGSAFVWYATREDAER 577
Query: 299 AIAMMN 304
AI N
Sbjct: 578 AILQFN 583
>gi|330802792|ref|XP_003289397.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
gi|325080515|gb|EGC34067.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
Length = 628
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 233 GGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 292
GG+I N+F+ H+P +F D++L F A+G V+S+KV +D G S +GFV + +
Sbjct: 85 GGEILEKDSTNIFVKHLPNDFTDEDLAKLFSAYGNVISSKVMID-PKGNSYGYGFVRFSN 143
Query: 293 PASAQNAIAMMNGCQLGGKKLKVQL 317
P +Q AI ++G Q KKL +L
Sbjct: 144 PNESQAAIKELDGFQFQNKKLLCRL 168
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 208 NSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGR 267
NSP S NS P + +S T + I P NLF++H+P D L F +G+
Sbjct: 480 NSPPYTSSLSINS-PQSKNSTTTTTTKVI--PNDTNLFVFHLPPFIDDAYLFQLFSQYGK 536
Query: 268 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLK 318
+ S +V DK TG +K +GFV + + A MNG ++G K LKV+LK
Sbjct: 537 LQSVRVITDKDTGENKGYGFVKFYNREDAFKCQKEMNGFRIGSKYLKVKLK 587
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LP +V++ ++ LF YG I + +++ SK F+++ +A +A++A+NG K+
Sbjct: 189 LPADVTDEQLRKLFEPYGKIVECKVMLDQNGQSKFAGFVRFFNDSEAASAIDAMNGI-KI 247
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQS 89
S PLVVK+ADTE+++ R+ +K Q+
Sbjct: 248 TKDSYPLVVKYADTEQQKVVRKQRKLQT 275
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
P NLFI +P + D++L F+ +G+++ KV +D+ G SK GFV + + + A +A
Sbjct: 180 PSNNLFIKPLPADVTDEQLRKLFEPYGKIVECKVMLDQ-NGQSKFAGFVRFFNDSEAASA 238
Query: 300 IAMMNGCQLGGKKLKVQLKR-DNKQNK 325
I MNG ++ + +K D +Q K
Sbjct: 239 IDAMNGIKITKDSYPLVVKYADTEQQK 265
>gi|224138468|ref|XP_002326610.1| predicted protein [Populus trichocarpa]
gi|222833932|gb|EEE72409.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 220 SNP--STSSSGGTGSGGQ---------IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 268
SNP ++S++GG GS Q ++ NL+I ++P D L F +FG +
Sbjct: 393 SNPPWASSNTGGLGSANQAGLGANGLKLKEYDDTNLYIGYLPPNLDDDGLIGLFSSFGEI 452
Query: 269 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 317
+ AKV D+ TG+SK +GFV Y A NAIA MNG ++ G+ + V++
Sbjct: 453 VMAKVIKDRITGLSKGYGFVKYRDVQMANNAIASMNGYRIDGRTIAVRV 501
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
I + LFI +P DQ L +AF FG V A+V +D+ TG S+ FGFV Y+S +
Sbjct: 30 IRCMSSSKLFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVEN 89
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNK 322
A A++ M+G LGG+ ++V + +
Sbjct: 90 ASEALSAMDGQNLGGRTVRVSFAEERR 116
>gi|64213752|gb|AAY41232.1| RLS [synthetic construct]
Length = 175
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K + E+ +F+ YG ++D+ I++ + S+GC F+K+ ++E ALAA+ A++G + M
Sbjct: 50 LNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVM 109
Query: 62 EGSSVPLVVKWADTEKER 79
G PL++++AD ++ R
Sbjct: 110 RGCEQPLIIRFADPKRPR 127
>gi|154413444|ref|XP_001579752.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913962|gb|EAY18766.1| hypothetical protein TVAG_267990 [Trichomonas vaginalis G3]
Length = 248
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 240 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 299
P N+FI +IP F +Q+L N +G ++S+K+ ++ TG SKCFGFV + + A A
Sbjct: 46 PSTNVFINYIPPRFTEQDLRNLCSQYGEIISSKIMINLETGQSKCFGFVKFRELSQAHAA 105
Query: 300 IAMMNGCQLGGKKL 313
I ++G +G K+L
Sbjct: 106 IQAIDGMSIGNKRL 119
>gi|146386739|pdb|2DHS|A Chain A, Solution Structure Of Nucleic Acid Binding Protein
Cugbp1ab And Its Binding Study With Dna And Rna
Length = 187
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWAD 74
MEG S P+VVK+AD
Sbjct: 174 MEGCSSPMVVKFAD 187
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>gi|225470686|ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261746 [Vitis vinifera]
Length = 751
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 207 NNSPGSVSPAVANSNPSTSSSGGTG----SGGQIEGPP-----GANLFIYHIPQEFGDQE 257
NN P +A+S S S G +G S + P A+L++ ++PQ +
Sbjct: 469 NNHATPSCPLIASSQGSNSLWGSSGLEIGSTPDTQSKPNKETSDADLYVGYLPQTMDENC 528
Query: 258 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 316
L F FG++ KV D+ATG+SK +GFV +E+PA A A++ M+G ++ GK L V+
Sbjct: 529 LAELFAPFGKIAKTKVIKDRATGISKGYGFVKFENPAHAALALSHMHGYKIDGKTLAVR 587
>gi|260221788|emb|CBA30701.1| Glycine-rich RNA-binding protein GRP1A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 149
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G L++ ++P F D++L AF G V SAKV +++ TG SK FGFV S A AQ AI
Sbjct: 8 GNKLYVGNLPYSFRDEDLQQAFSQHGSVSSAKVMMERDTGRSKGFGFVEMGSDAEAQTAI 67
Query: 301 AMMNGCQLGGKKLKVQLKR 319
+ MNG Q GG+ L V R
Sbjct: 68 SAMNGQQFGGRGLVVNEAR 86
>gi|310689909|pdb|3NNC|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
Length = 175
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 102 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 161
Query: 61 MEGSSVPLVVKWAD 74
MEG S P+VVK+AD
Sbjct: 162 MEGCSSPMVVKFAD 175
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 11 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 67
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 68 HNMKVLPGMHHPIQMKPADSEK 89
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
I + LFI +P DQ L +AF FG V A+V +D+ TG S+ FGFV Y+S +
Sbjct: 30 IRCMSSSKLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVEN 89
Query: 296 AQNAIAMMNGCQLGGKKLKVQLKRDNK 322
A A++ M+G LGG+ ++V + +
Sbjct: 90 ASEALSAMDGQNLGGRTVRVSFAEERR 116
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,816,075,646
Number of Sequences: 23463169
Number of extensions: 279376646
Number of successful extensions: 818914
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13223
Number of HSP's successfully gapped in prelim test: 8956
Number of HSP's that attempted gapping in prelim test: 759575
Number of HSP's gapped (non-prelim): 61524
length of query: 327
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 185
effective length of database: 9,027,425,369
effective search space: 1670073693265
effective search space used: 1670073693265
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)