BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020372
(327 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A0JM51|CELF5_XENTR CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2
SV=1
Length = 486
Score = 191 bits (485), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 186/367 (50%), Gaps = 61/367 (16%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE EV+++F +G+I++ +LRG +SKGCAF+K+ + +A AA++A++G
Sbjct: 141 MLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q PSL ALP+ PY+ Y
Sbjct: 201 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIF------TPSL--ALPIS---PYSAY- 248
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + G + + P V + ++ N P P SG
Sbjct: 249 -----AQALMQQQTTVLSTSHGSY-LSPSVAFPSCHIQQIGAVNLNGLPAAPITPASGLH 302
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNNS-PGSVSPAVANSNPSTSSSG 228
G AVPGL P+ P+P H L+ S+ P A S T S
Sbjct: 303 SPPVIGTAAVPGLVAPLTNGFPGLVPFPSS---HPALDTIYTNSIVPYPAQSPALTVESL 359
Query: 229 GTGSGG----------------------------QIEGPPGANLFIYHIPQEFGDQELGN 260
G Q EGP G NLFIYH+PQEFGD EL
Sbjct: 360 HPSFTGVQQYSAIYPTAALTPVTHSTPQPPPILQQREGPEGCNLFIYHLPQEFGDNELTQ 419
Query: 261 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 320
F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 420 MFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRP 479
Query: 321 NKQNKPY 327
+PY
Sbjct: 480 KDTTQPY 486
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 54 IPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 113
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E R+
Sbjct: 114 LPGMARPIQVKPADSESRGGDRK 136
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 301
LF+ IP+ +++L F+ FG++ V D+ TG+ K F++Y + SA A A
Sbjct: 48 KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTA 107
Query: 302 MMNGCQLGGKKLKVQLKRDNKQNK 325
+ L G +Q+K + +++
Sbjct: 108 LHEQKTLPGMARPIQVKPADSESR 131
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
LF+ + ++ ++E+ + FQAFG + V + G SK FV + S A AQ AI
Sbjct: 136 KLFVGMLSKQQSEEEVTSMFQAFGSIEECSV-LRGPDGSSKGCAFVKFSSHAEAQAAIQA 194
Query: 303 MNGCQL---GGKKLKVQLKRDNKQN 324
++G Q L V+ +K+
Sbjct: 195 LHGSQTMPGASSSLVVKFADTDKER 219
>sp|Q8N6W0|CELF5_HUMAN CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1
Length = 485
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 185/368 (50%), Gaps = 63/368 (17%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G
Sbjct: 140 MLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
M G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 200 MPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY- 247
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
+ LMQ + + + + P V +S N P P SG
Sbjct: 248 -----AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLH 300
Query: 181 GS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-N 221
G AVPGL P+ P+PGG H L + G V SP VA + +
Sbjct: 301 SPPLLGTTAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLH 357
Query: 222 PSTS----------SSGGTGSGGQI------------EGPPGANLFIYHIPQEFGDQELG 259
P+ S ++ T + EGP G NLFIYH+PQEFGD EL
Sbjct: 358 PAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELT 417
Query: 260 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 418 QMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 477
Query: 320 DNKQNKPY 327
PY
Sbjct: 478 PKDPGHPY 485
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ LF +G I +L +L+ KGCAFL Y ++ A+ A A++ +
Sbjct: 52 IPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKT 111
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 112 LPGMARPIQVKPADSE 127
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 226 SSGGTGSGGQIEGPPGAN---LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 282
SSG GGQ +G + LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 283 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>sp|Q91579|CEL3A_XENLA CUGBP Elav-like family member 3-A OS=Xenopus laevis GN=tnrc4-a PE=2
SV=2
Length = 462
Score = 184 bits (467), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 185/383 (48%), Gaps = 77/383 (20%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +G I + +LRG TSKGCAF+K++T +A AA+ A++G
Sbjct: 101 MLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
+ G+S LVVK+ADTEKER RR Q+ AN L +F + + + Y+ Y
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQV---ANQL--------GMFSPIALQFGA-YSAYT 208
Query: 121 YQASGSYGLMQYR----------LPPMQNQPGF----------HGII-PPVNQGNAMRGA 159
S LMQ + L PM +GII P+ Q N + +
Sbjct: 209 QAVSDQ--LMQQQAALVAAHSAYLNPMATMAAVQMQQMATINPNGIIATPITQINPITSS 266
Query: 160 S-----PDLSSNMGPRNYAMPPSGFVGSGYPAVP---------------GLQ-YPMPYPG 198
S P L++ + P+ +GY AVP GL YP P
Sbjct: 267 SGTSTPPTLTAT----QVSAIPATLGVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPV 322
Query: 199 GMLGHRPLNNSP--------------GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANL 244
L PL + G VSPA + EGP G N+
Sbjct: 323 AQLD--PLQQAYAGMQHYTAAYPAAYGLVSPAFTQPPAILQQQPPQQQQQR-EGPEGCNI 379
Query: 245 FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 304
FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MN
Sbjct: 380 FIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMN 439
Query: 305 GCQLGGKKLKVQLKRDNKQNKPY 327
G Q+G K+LKVQLKR N+PY
Sbjct: 440 GFQIGMKRLKVQLKRPKDANRPY 462
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>sp|Q5R995|CELF1_PONAB CUGBP Elav-like family member 1 OS=Pongo abelii GN=CELF1 PE=2 SV=1
Length = 513
Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 402 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 460
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 55/83 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +IL G S+GCA + + T+ A A++A++
Sbjct: 141 MISKKCTENDIRVMFSSFGQIEECRILWGPDGLSRGCALVTFTTRAMAQTAIKAMHQAQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 201 MEGCSSPMVVKFADTQKDKEQKR 223
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 50 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 106
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 107 HNMKVLPGMHHPIQMKPADSEK 128
>sp|Q4QQT3|CELF1_RAT CUGBP Elav-like family member 1 OS=Rattus norvegicus GN=Celf1 PE=2
SV=1
Length = 487
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 376 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 434
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>sp|P28659|CELF1_MOUSE CUGBP Elav-like family member 1 OS=Mus musculus GN=Celf1 PE=1 SV=2
Length = 486
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ ILR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>sp|Q92879|CELF1_HUMAN CUGBP Elav-like family member 1 OS=Homo sapiens GN=CELF1 PE=1 SV=2
Length = 486
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N N T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 375 PTLYNQNLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 433
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPMVVKFADTQKDKEQKR 196
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>sp|Q5F3T7|CELF1_CHICK CUGBP Elav-like family member 1 OS=Gallus gallus GN=CELF1 PE=1 SV=2
Length = 489
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P + N + T S G +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF
Sbjct: 378 PTLYNQSLLTQQSIG-AAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVF 436
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 437 IDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MISKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
MEG S P+VVK+ADT+K+++ +R
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKR 196
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ E ++ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKILPGMHHPIQMKPADSEK 101
>sp|Q28HE9|CELF1_XENTR CUGBP Elav-like family member 1 OS=Xenopus tropicalis GN=celf1 PE=2
SV=1
Length = 490
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 221 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T
Sbjct: 383 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQT 442
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 443 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG--VSK--CF-GFVSYESP 293
P +F+ +P+ + ++EL F+ +G V V D++ SK CF F + ++
Sbjct: 13 PDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAA 72
Query: 294 ASAQNAIAMM 303
AQNA+ M
Sbjct: 73 LEAQNALHNM 82
>sp|A4IIM2|CELF2_XENTR CUGBP Elav-like family member 2 OS=Xenopus tropicalis GN=celf2 PE=2
SV=1
Length = 513
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 416 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 475
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 476 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 133 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 192
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 193 MEGCSSPIVVKFADTQKDKE 212
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 42 IPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 101
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 102 KTLPGMHHPIQMKPADSEK 120
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG--VSK--CF-GFVSYESP 293
P +F+ IP+ + ++EL + F+ +G V V D++ SK CF F + ++
Sbjct: 32 PDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAA 91
Query: 294 ASAQNAI 300
AQNA+
Sbjct: 92 LEAQNAL 98
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI + ++ + ++ F FG++ ++ + G+S+ FV++ + A AQNAI M
Sbjct: 129 LFIGMVSKKCNENDIRVMFSPFGQIEECRI-LRGPDGLSRGCAFVTFSTRAMAQNAIKAM 187
Query: 304 NGCQ 307
+ Q
Sbjct: 188 HQSQ 191
>sp|Q6PF35|CEL1B_XENLA CUGBP Elav-like family member 1-B OS=Xenopus laevis GN=cugbp1-b
PE=2 SV=1
Length = 489
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 221 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T
Sbjct: 382 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQT 441
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGF+SY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 442 NLSKCFGFISYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ LFS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRTLFSQFGQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFG 106
MEG S P+VVK+ADT+K+++ +R + Q NA S +L G
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLAG 219
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
>sp|Q7ZXE2|CELF2_XENLA CUGBP Elav-like family member 2 OS=Xenopus laevis GN=celf2 PE=1
SV=1
Length = 536
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 156 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 215
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 216 MEGCSSPIVVKFADTQKDKE 235
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 65 IPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 124
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 125 KTLPGMHHPIQMKPADSEK 143
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 220 SNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
SN +T+ G P +F+ IP+ + ++EL + F+ +G V V D++
Sbjct: 36 SNGTTNKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQ 95
Query: 280 G--VSK--CF-GFVSYESPASAQNAI 300
SK CF F + ++ AQNA+
Sbjct: 96 NPPQSKGCCFVTFYTRKAALEAQNAL 121
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI + ++ + ++ F FG++ ++ + G+S+ FV++ + A AQNAI M
Sbjct: 152 LFIGMVSKKCNENDIRVMFSPFGQIEECRI-LRGPDGLSRGCAFVTFSTRAMAQNAIKAM 210
Query: 304 NGCQ 307
+ Q
Sbjct: 211 HQSQ 214
>sp|Q9IBD0|CELF1_DANRE CUGBP Elav-like family member 1 OS=Danio rerio GN=celf1 PE=1 SV=1
Length = 501
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 404 SAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 463
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 464 YDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + ++ A +A+++++
Sbjct: 114 MISKKCNENDIRLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMG 111
MEG S P+VVK+ADT+K+++ +R + Q NA S +L G +G
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKRIAQQLQQQMQQLNAASMWGNLTGLNSLG 224
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P+ SE ++ LF YG + ++ +LR Q SKGC F+ Y T++ AL A A++
Sbjct: 23 IPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQNALHNM 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KILPGMHHPIQMKPADSEK 101
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG--VSKCFGFVSY---ESPASAQN 298
+F+ IP+ + + +L F+ +G V V D++ SK FV+Y +S AQN
Sbjct: 18 MFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQN 77
Query: 299 AIAMM 303
A+ M
Sbjct: 78 ALHNM 82
>sp|Q5R8Y8|CELF2_PONAB CUGBP Elav-like family member 2 OS=Pongo abelii GN=CELF2 PE=2 SV=2
Length = 508
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI + ++ + ++ F FG++ ++ + G+S+ FV++ + A AQNAI M
Sbjct: 134 LFIGMVSKKCNENDIRVMFSPFGQIEECRI-LRGPDGLSRGCAFVTFSTRAMAQNAIKAM 192
Query: 304 NGCQ 307
+ Q
Sbjct: 193 HQSQ 196
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG--VSK--CF-GFVSYESP 293
P +F+ IP+ + ++EL F+ +G V V D++ SK CF F + ++
Sbjct: 37 PDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAA 96
Query: 294 ASAQNAI 300
AQNA+
Sbjct: 97 LEAQNAL 103
>sp|O95319|CELF2_HUMAN CUGBP Elav-like family member 2 OS=Homo sapiens GN=CELF2 PE=1 SV=1
Length = 508
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI + ++ + ++ F FG++ ++ + G+S+ FV++ + A AQNAI M
Sbjct: 134 LFIGMVSKKCNENDIRVMFSPFGQIEECRI-LRGPDGLSRGCAFVTFSTRAMAQNAIKAM 192
Query: 304 NGCQ 307
+ Q
Sbjct: 193 HQSQ 196
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG--VSK--CF-GFVSYESP 293
P +F+ IP+ + ++EL F+ +G V V D++ SK CF F + ++
Sbjct: 37 PDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAA 96
Query: 294 ASAQNAI 300
AQNA+
Sbjct: 97 LEAQNAL 103
>sp|O57406|CEL1A_XENLA CUGBP Elav-like family member 1-A OS=Xenopus laevis GN=cugbp1-a
PE=1 SV=1
Length = 489
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 221 NPSTSSSGGTGSGG-QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
N S S G G+ G Q EGP GANLFIYH+PQEFGDQ+L F FG V+S+KVF+DK T
Sbjct: 382 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQT 441
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
+SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 442 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ KN +E ++ A+FS +G I++ +ILRG S+GCAF+ + T+ A A+++++
Sbjct: 114 MVSKNCNENDIRAMFSPFGQIEECRILRGPDGMSRGCAFVTFTTRSMAQMAIKSMHQAQT 173
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFG 106
MEG S P+VVK+ADT+K+++ +R + Q NA S +L G
Sbjct: 174 MEGCSSPIVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLTG 219
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + ++ +LR Q SKGC F+ + T++ AALEA N
Sbjct: 23 VPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRK---AALEAQNAL 79
Query: 59 HKME---GSSVPLVVKWADTEK 77
H M+ G P+ +K AD+EK
Sbjct: 80 HNMKVLPGMHHPIQMKPADSEK 101
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG--VSK--CF-GFVSYESP 293
P +F+ +P+ + ++EL F+ +G V V D++ SK CF F + ++
Sbjct: 13 PDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAA 72
Query: 294 ASAQNAIAMM 303
AQNA+ M
Sbjct: 73 LEAQNALHNM 82
>sp|Q792H5|CELF2_RAT CUGBP Elav-like family member 2 OS=Rattus norvegicus GN=Celf2 PE=2
SV=1
Length = 508
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI + ++ + ++ F FG++ ++ + G+S+ FV++ + A AQNAI M
Sbjct: 134 LFIGMVSKKCNENDIRVMFSPFGQIEECRI-LRGPDGLSRGCAFVTFSTRAMAQNAIKAM 192
Query: 304 NGCQ 307
+ Q
Sbjct: 193 HQSQ 196
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG--VSK--CF-GFVSYESP 293
P +F+ IP+ + ++EL F+ +G V V D++ SK CF F + ++
Sbjct: 37 PDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAA 96
Query: 294 ASAQNAI 300
AQNA+
Sbjct: 97 LEAQNAL 103
>sp|Q9Z0H4|CELF2_MOUSE CUGBP Elav-like family member 2 OS=Mus musculus GN=Celf2 PE=1 SV=1
Length = 508
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 411 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 470
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 471 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 138 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 197
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 198 MEGCSSPIVVKFADTQKDKE 217
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 47 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 106
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 107 KTLPGMHHPIQMKPADSEK 125
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI + ++ + ++ F FG++ ++ + G+S+ FV++ + A AQNAI M
Sbjct: 134 LFIGMVSKKCNENDIRVMFSPFGQIEECRI-LRGPDGLSRGCAFVTFSTRAMAQNAIKAM 192
Query: 304 NGCQ 307
+ Q
Sbjct: 193 HQSQ 196
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG--VSK--CF-GFVSYESP 293
P +F+ IP+ + ++EL F+ +G V V D++ SK CF F + ++
Sbjct: 37 PDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAA 96
Query: 294 ASAQNAI 300
AQNA+
Sbjct: 97 LEAQNAL 103
>sp|Q6P0B1|CELF2_DANRE CUGBP Elav-like family member 2 OS=Danio rerio GN=celf2 PE=2 SV=1
Length = 514
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 476
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS YG I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 142 MVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 201
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
MEG S P+VVK+ADT+K+++ RR Q+ +Q N+ S SL G G P Y
Sbjct: 202 MEGCSSPMVVKFADTQKDKEQRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALL 259
Query: 121 YQASGSYGL 129
QA+ S L
Sbjct: 260 QQATSSSNL 268
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + ILR Q SKGC F+ + T++ AL A A++
Sbjct: 51 IPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 110
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 111 KTLTGMHHPIQMKPADSEK 129
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 215 PAVANSNPSTSSSG----GTGSGGQIEG---------PPGANLFIYHIPQEFGDQELGNA 261
P+ ANS S S+ G+ G++ G P +F+ IP+ + ++EL
Sbjct: 4 PSTANSAVSMRSTEELLLSNGTAGKMNGALEHSDQPDPDAIKMFVGQIPRSWSEKELKEL 63
Query: 262 FQAFGRVLSAKVFVDKATG--VSK--CF-GFVSYESPASAQNAI 300
F+ +G V + D++ SK CF F + ++ AQNA+
Sbjct: 64 FEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNAL 107
>sp|Q7T2T1|CELF2_CHICK CUGBP Elav-like family member 2 OS=Gallus gallus GN=CELF2 PE=1 SV=2
Length = 484
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 230 TGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+ +G Q EGP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 387 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 446
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 114 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 173
Query: 61 MEGSSVPLVVKWADTEKERQ 80
MEG S P+VVK+ADT+K+++
Sbjct: 174 MEGCSSPIVVKFADTQKDKE 193
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAALEAINGK 58
+P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A A++
Sbjct: 23 IPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNI 82
Query: 59 HKMEGSSVPLVVKWADTEK 77
+ G P+ +K AD+EK
Sbjct: 83 KTLPGMHHPIQMKPADSEK 101
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 303
LFI + ++ + ++ F FG++ ++ + G+S+ FV++ + A AQNAI M
Sbjct: 110 LFIGMVSKKCNENDIRVMFSPFGQIEECRI-LRGPDGLSRGCAFVTFSTRAMAQNAIKAM 168
Query: 304 NGCQ 307
+ Q
Sbjct: 169 HQSQ 172
>sp|Q96J87|CELF6_HUMAN CUGBP Elav-like family member 6 OS=Homo sapiens GN=CELF6 PE=1 SV=1
Length = 481
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
Q EGP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P
Sbjct: 389 QREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 449 SAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQK 86
M G+S LVVK ADT++ER RR Q+
Sbjct: 200 MAGASSSLVVKLADTDRERALRRMQQ 225
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 300 I 300
+
Sbjct: 107 L 107
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
LF+ + ++ G++++ FQ FG + V + G SK FV + S AQ AI
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTV-LRSPDGTSKGCAFVKFGSQGEAQAAIRG 193
Query: 303 MNGCQL---GGKKLKVQLKRDNKQN 324
++G + L V+L +++
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRER 218
>sp|Q8CIN6|CELF3_MOUSE CUGBP Elav-like family member 3 OS=Mus musculus GN=Celf3 PE=2 SV=1
Length = 465
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 100 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 159
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 160 LPGASSSLVVKFADTEKERGLRRMQQVATQ 189
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>sp|Q5SZQ8|CELF3_HUMAN CUGBP Elav-like family member 3 OS=Homo sapiens GN=CELF3 PE=1 SV=1
Length = 465
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>sp|Q08E07|CELF3_BOVIN CUGBP Elav-like family member 3 OS=Bos taurus GN=CELF3 PE=2 SV=1
Length = 461
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 371 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 430
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 431 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 461
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A++ +
Sbjct: 14 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 295
++ P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + S
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDS 60
Query: 296 AQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 325
A A A+ L G +Q+K + +++
Sbjct: 61 ALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
>sp|Q9IBD1|CELF3_DANRE CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2
Length = 452
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 362 EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 421
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 422 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 452
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 63/90 (70%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K +S+A+V +F +G+I++ +LRG SKGCAF+KY++ +A AA+ A++G
Sbjct: 100 MLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRT 159
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ SQ
Sbjct: 160 LPGASSSLVVKFADTEKERGIRRMQQVASQ 189
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKT 73
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 74 LPGMNRPIQVKPADSE 89
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 299
LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQNA
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNA 67
Query: 300 I 300
+
Sbjct: 68 L 68
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EG LF+ + ++ D ++ F+ FG + V + G SK FV Y+S A A
Sbjct: 89 EGRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECTV-LRGPDGASKGCAFVKYQSNAEA 147
Query: 297 QNAIAMMNG 305
Q AI+ ++G
Sbjct: 148 QAAISALHG 156
>sp|Q6DGV1|CELF4_DANRE CUGBP Elav-like family member 4 OS=Danio rerio GN=celf4 PE=2 SV=1
Length = 520
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++P SA
Sbjct: 430 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 489
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 490 QAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 520
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G+I++ ILRG SKGCAF+KY T +A AA+ A++G
Sbjct: 141 MLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQT 200
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 201 MPGASSSLVVKFADTDKERTIRRMQQMAGQ 230
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 54 IPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTALHEQKT 113
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 114 LPGMNRPIQVKPADSESRGEDRK 136
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ A+
Sbjct: 49 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTAL 108
>sp|Q7ZWM3|CEL3B_XENLA CUGBP Elav-like family member 3-B OS=Xenopus laevis GN=tnrc4-b PE=2
SV=1
Length = 462
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 211 GSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 270
G VSPA P+ + Q EGP G N+FIYH+PQEF D E+ F FG V+S
Sbjct: 347 GLVSPAFTQP-PAILTQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVIS 405
Query: 271 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
AKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 406 AKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K ++ +V +F +G I + +LRG TSKGCAF+K++T +A AA+ A++G
Sbjct: 101 MLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRT 160
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 161 LPGASSSLVVKFADTEKERGLRRMQQVANQ 190
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ +F +G I +L +++ KGCAFL Y +E AL A A++ +
Sbjct: 14 IPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKT 73
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK AD+E + R+
Sbjct: 74 LPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 236 IEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ES 292
++ P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60
Query: 293 PASAQNAI 300
AQ+A+
Sbjct: 61 ALKAQSAL 68
>sp|Q4R535|CELF4_MACFA CUGBP Elav-like family member 4 OS=Macaca fascicularis GN=CELF4
PE=2 SV=1
Length = 474
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 147 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 206
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 207 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 236
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 404 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 443
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 444 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 474
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>sp|Q5NVC8|CELF4_PONAB CUGBP Elav-like family member 4 OS=Pongo abelii GN=CELF4 PE=2 SV=2
Length = 486
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>sp|Q9BZC1|CELF4_HUMAN CUGBP Elav-like family member 4 OS=Homo sapiens GN=CELF4 PE=1 SV=1
Length = 486
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>sp|Q7TSY6|CELF4_MOUSE CUGBP Elav-like family member 4 OS=Mus musculus GN=Celf4 PE=1 SV=2
Length = 486
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 158 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 217
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 90
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 218 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NL IYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 416 EGPEGCNLLIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 455
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHK 60
+P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A++ +
Sbjct: 61 IPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKT 120
Query: 61 MEGSSVPLVVKWADTE 76
+ G + P+ VK AD+E
Sbjct: 121 LPGMNRPIQVKPADSE 136
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>sp|Q0V9L3|CELF4_XENTR CUGBP Elav-like family member 4 OS=Xenopus tropicalis GN=celf4 PE=2
SV=1
Length = 424
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
EGP G NLFIYH+PQEFGD EL F FG FVS+++PASA
Sbjct: 354 EGPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASA 393
Query: 297 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 394 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 424
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 16 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 75
++ G + +Q+ ++ GCAF+KY + +A AA+ A++G M G+S LVVK+ADT
Sbjct: 113 TLPGMNRPIQVKPADSESRGGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADT 172
Query: 76 EKERQARRAQKAQSQ 90
+KER RR Q+ Q
Sbjct: 173 DKERTMRRMQQMAGQ 187
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 17/101 (16%)
Query: 217 VANSNPSTSSSGGTGSG---GQIEGPPGA-----------NLFIYHIPQEFGDQELGNAF 262
VAN P SS +G G P GA LFI IP+ +++L F
Sbjct: 8 VANGQPDNSSLSSNPTGHMNGLTHSPGGAATIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 67
Query: 263 QAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 300
+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 68 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 108
>sp|Q7TN33|CELF6_MOUSE CUGBP Elav-like family member 6 OS=Mus musculus GN=Celf6 PE=2 SV=1
Length = 460
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 1 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 60
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 140 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 199
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 200 MTGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACGAYT 247
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A++ +
Sbjct: 53 IPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKT 112
Query: 61 MEGSSVPLVVKWADTEKERQARR 83
+ G + P+ VK A +E + R+
Sbjct: 113 LPGMNRPIQVKPAASEGRGEDRK 135
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 223 STSSSGGTGSGGQIEGPP-------GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 275
ST+ SGG G G GP LF+ IP+ +Q+L F+ FGR+ V
Sbjct: 21 STADSGG-GMSGLNPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLK 79
Query: 276 DKATGVSKCFGFVSY---ESPASAQNAI 300
D+ TG+ K F++Y +S AQ+A+
Sbjct: 80 DRLTGLHKGCAFLTYCARDSALKAQSAL 107
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
LF+ + ++ G++++ FQ FG + V + G SK FV + S AQ AI
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTV-LRSPDGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 303 MNG 305
++G
Sbjct: 194 LHG 196
>sp|O04425|FCA_ARATH Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA
PE=1 SV=2
Length = 747
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 53/78 (67%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L K +E EV +F +G ++D+ ++R + S+GC F+KY +KE A+AA++ +NG + M
Sbjct: 218 LNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTM 277
Query: 62 EGSSVPLVVKWADTEKER 79
G + PL+V++A+ ++ +
Sbjct: 278 RGCNQPLIVRFAEPKRPK 295
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
+P+ +E E+ F +G + ++ +++ + +GC F+KY T + A A+ A++ +
Sbjct: 127 VPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQIT 186
Query: 61 MEGSSVPLVVKWADTEKER 79
+ G + P+ V++AD E+ER
Sbjct: 187 LPGGTGPVQVRYADGERER 205
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 300
LF+ +P+ ++E+ F+ G VL + DK TG + FV Y + A AI
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 301 AMMNGCQLGGKKLKVQLK 318
A+ N L G VQ++
Sbjct: 180 ALHNQITLPGGTGPVQVR 197
>sp|P0CP46|PABP_CRYNJ Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=PAB1 PE=3 SV=1
Length = 673
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NL++ ++ E+ D L F+AFG + S+KV D +GVS+ FGFV Y SP A A+
Sbjct: 329 GVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDD-SGVSRGFGFVCYSSPDEATKAV 387
Query: 301 AMMNGCQLGGKKLKVQL 317
+ MNG +G K L V L
Sbjct: 388 SEMNGKMIGTKPLYVAL 404
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+FI ++ Q ++ L + F AFG +LS KV D+ G S+ F FV Y + +A AI
Sbjct: 135 NIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDE-NGKSRGFAFVHYSTGEAADAAIKA 193
Query: 303 MNGCQLGGKKLKV 315
+NG L KK+ V
Sbjct: 194 VNGMLLNDKKVYV 206
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N++I ++ E D E + + FG +S + D+ GVSK FGFV+YE+ SA+ A+
Sbjct: 228 NVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDE-KGVSKGFGFVNYENHESARKAVDE 286
Query: 303 MNGCQLGGKKL 313
+N ++ GKKL
Sbjct: 287 LNEKEVNGKKL 297
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L + + A F +GTI +++R S+G F+ Y + ++A A+ +NG KM
Sbjct: 337 LDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNG--KM 394
Query: 62 EGSSVPLVVKWADTEK-ERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYNG 118
G+ PL V A + RQA +Q AQ +A + P + G + PM PP G
Sbjct: 395 IGTK-PLYVALAQRKDVRRQALESQIAQ-RAQQRMQYGAGFPGMQGYMGQPMYGYPPMPG 452
Query: 119 YG 120
YG
Sbjct: 453 YG 454
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 5 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 64
V++AE L +G + + R + SKG F+ YE E A A++ +N K E +
Sbjct: 237 EVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEK---EVN 293
Query: 65 SVPLVVKWADTEKERQA 81
L A T+ ER+A
Sbjct: 294 GKKLYAGRAQTKSEREA 310
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAING 57
L +++ + F+ +G I ++ S+G AF+ Y T E A AA++A+NG
Sbjct: 141 LDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNG 196
>sp|P0CP47|PABP_CRYNB Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=PAB1 PE=3 SV=1
Length = 673
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NL++ ++ E+ D L F+AFG + S+KV D +GVS+ FGFV Y SP A A+
Sbjct: 329 GVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDD-SGVSRGFGFVCYSSPDEATKAV 387
Query: 301 AMMNGCQLGGKKLKVQL 317
+ MNG +G K L V L
Sbjct: 388 SEMNGKMIGTKPLYVAL 404
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+FI ++ Q ++ L + F AFG +LS KV D+ G S+ F FV Y + +A AI
Sbjct: 135 NIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDE-NGKSRGFAFVHYSTGEAADAAIKA 193
Query: 303 MNGCQLGGKKLKV 315
+NG L KK+ V
Sbjct: 194 VNGMLLNDKKVYV 206
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N++I ++ E D E + + FG +S + D+ GVSK FGFV+YE+ SA+ A+
Sbjct: 228 NVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDE-KGVSKGFGFVNYENHESARKAVDE 286
Query: 303 MNGCQLGGKKL 313
+N ++ GKKL
Sbjct: 287 LNEKEVNGKKL 297
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L + + A F +GTI +++R S+G F+ Y + ++A A+ +NG KM
Sbjct: 337 LDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNG--KM 394
Query: 62 EGSSVPLVVKWADTEK-ERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYNG 118
G+ PL V A + RQA +Q AQ +A + P + G + PM PP G
Sbjct: 395 IGTK-PLYVALAQRKDVRRQALESQIAQ-RAQQRMQYGAGFPGMQGYMGQPMYGYPPMPG 452
Query: 119 YG 120
YG
Sbjct: 453 YG 454
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 5 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 64
V++AE L +G + + R + SKG F+ YE E A A++ +N K E +
Sbjct: 237 EVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEK---EVN 293
Query: 65 SVPLVVKWADTEKERQA 81
L A T+ ER+A
Sbjct: 294 GKKLYAGRAQTKSEREA 310
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAING 57
L +++ + F+ +G I ++ S+G AF+ Y T E A AA++A+NG
Sbjct: 141 LDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNG 196
>sp|O97018|SXL_CHRRU Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2
Length = 307
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 211 GSVSPAVANSNPSTSSSG---GTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGR 267
GS ++ N P+ S++ G G G +G G NL + ++PQ+ D+EL F+ G
Sbjct: 51 GSAMGSMCNMAPAISTNSVNSGGGDCGDNQGCNGTNLIVNYLPQDMTDRELYALFRTCGP 110
Query: 268 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
+ + ++ D TG S + FV + S AQNAI +NG + K+LKV R
Sbjct: 111 INTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYAR 162
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHK 60
LP+ +++ E+ +F YG I ILR +G AF+++ +E+A A+ A+N
Sbjct: 178 LPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIP 237
Query: 61 MEGSSVPLVVKWADTEKERQA 81
EG+S PL V+ A+ + +A
Sbjct: 238 -EGASQPLTVRLAEEHGKMKA 257
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 237 EGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 296
E NL++ ++P+ D EL F +G ++ + DK TG + FV + A
Sbjct: 166 ESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEA 225
Query: 297 QNAIAMMN 304
Q AI+ +N
Sbjct: 226 QEAISALN 233
>sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pab1 PE=1 SV=2
Length = 653
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NLFI ++ E D+ L F AFG + SAK+ D+ G SK FGFV Y +P A A+
Sbjct: 363 GVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDE-QGKSKGFGFVCYTTPEEANKAV 421
Query: 301 AMMNGCQLGGKKLKVQL 317
MN L GK L V L
Sbjct: 422 TEMNQRMLAGKPLYVAL 438
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+FI ++ ++ L + F AFG++LS KV VD+ G +K +GFV ++S SA AI
Sbjct: 169 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDE-LGNAKGYGFVHFDSVESANAAIEH 227
Query: 303 MNGCQLGGKKLKV--QLKRDNKQNK 325
+NG L KK+ V + R +Q+K
Sbjct: 228 VNGMLLNDKKVYVGHHVSRRERQSK 252
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N++I ++ E +QE + F FG + S + D+ + FGFV+Y + AQ A+
Sbjct: 261 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVD 319
Query: 302 MMNGCQLGGKKLKV 315
+N + GKKL V
Sbjct: 320 ELNDKEYKGKKLYV 333
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 79/199 (39%), Gaps = 56/199 (28%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L V + + A FS +GTI +I+ Q SKG F+ Y T E+A A+ +N + +
Sbjct: 371 LQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMN-QRML 429
Query: 62 EGSSVPLVVKWADTEKERQARRAQ-KAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 120
G PL V A + ++ RR+Q +AQ QA N
Sbjct: 430 AGK--PLYVALA---QRKEVRRSQLEAQIQARN--------------------------- 457
Query: 121 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 180
Q+RL Q Q IP V G P + GP Y + P+
Sbjct: 458 ----------QFRL---QQQVAAAAGIPAVQYG----ATGPLI---YGPGGYPI-PAAVN 496
Query: 181 GSGYPAVPGLQYPMP-YPG 198
G G P VPG PMP YPG
Sbjct: 497 GRGMPMVPGHNGPMPMYPG 515
>sp|O01671|SXL_MEGSC Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3
Length = 321
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 152 QGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPG 211
+G M G S L S M YA P S YP+ G Q+ R N+
Sbjct: 3 RGGRMWGMSHSLPSGMSS--YAFSPQDTDFSSYPSTIGRQHSQQ------SQRYYQNNNC 54
Query: 212 SVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 271
+ +N + S + GT + G NL + ++PQ+ D+EL + F+ G + +
Sbjct: 55 GLGSVGNMANSTNSLNSGTNN-------SGTNLIVNYLPQDMQDRELYSLFRTIGPINTC 107
Query: 272 KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
++ D TG S +GFV + S A A AI +NG + K++KV R
Sbjct: 108 RIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFAR 155
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
L +++++ ++ +F YG I ILR T +G AF+++ +E+A A+ A+N
Sbjct: 171 LSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALNNVIP 230
Query: 61 MEGSSVPLVVKWAD 74
EG + PL V+ A+
Sbjct: 231 -EGGTQPLTVRVAE 243
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
NL++ ++ + D++L F +G+++ + DK TG + F+ + AQ AI+
Sbjct: 164 TNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAIS 223
Query: 302 MMNGC--QLGGKKLKVQLKRDNKQNK 325
+N + G + L V++ ++ ++K
Sbjct: 224 ALNNVIPEGGTQPLTVRVAEEHGKSK 249
>sp|Q28FX0|ELAV3_XENTR ELAV-like protein 3 OS=Xenopus tropicalis GN=elavl3 PE=2 SV=1
Length = 343
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 220 SNPSTSSSGGTGSGGQIEGPPGA------NLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 273
S T +S G GS G + G GA NL + ++PQ +E + F + G + S K+
Sbjct: 7 STMETQASNGPGSVGILNGTNGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKL 66
Query: 274 FVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
DK TG S +GFV+Y P A AI +NG +L K +KV R
Sbjct: 67 VRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYAR 112
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 222 PSTSSSGGTGSGGQIEGPP--GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 279
P T S +G + GP G +F+Y++ E + L F FG V + KV D T
Sbjct: 238 PITIDSVTNLAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTT 297
Query: 280 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
K FGFV+ + A AIA +NG +LG + L+V K +KQ+K
Sbjct: 298 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFK-TSKQHK 342
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG-VSKCFGFVSYESPASAQNAI 300
ANL++ +P+ +E+ F +GR++++++ VD+ TG VS+ GF+ ++ A+ AI
Sbjct: 121 ANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAI 180
Query: 301 AMMNG 305
+NG
Sbjct: 181 KGLNG 185
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQIL--RGSQQTSKGCAFLKYETKEQALAALEAINGKH 59
LPK +++ E+ LFS YG I +IL + + S+G F++++ + +A A++ +NG+
Sbjct: 128 LPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKGLNGQK 187
Query: 60 KMEGSSVPLVVKWAD--TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 117
+ G+S P+ VK+A+ ++K QA Q+ A F P+ N
Sbjct: 188 PL-GASEPITVKFANNPSQKTGQALLTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTN 246
Query: 118 GYGYQASG----SYGLMQYRLPPMQNQPGFHGIIPP 149
G +G + + Y L P ++ + P
Sbjct: 247 LAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGP 282
>sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L
PE=2 SV=1
Length = 614
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N+++ ++P + +Q L + F FG++LS KV D +G S+CFGFV++E AQ A+
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVV 249
Query: 302 MMNGCQLGGKKL---KVQLKRDNKQNK 325
MNG ++ G+ L + Q KR +QN+
Sbjct: 250 HMNGKEVSGRLLYAGRAQ-KRVERQNE 275
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NL++ ++ D +L F +G + SAKV + G SK FGFV + SP A A+
Sbjct: 293 GVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEG--GHSKGFGFVCFSSPEEATKAV 350
Query: 301 AMMNGCQLGGKKLKVQLKRDNKQNK 325
MNG +G K L V L + ++ K
Sbjct: 351 TEMNGRIVGTKPLYVALAQRKEERK 375
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+FI ++ ++ L + F FG +LS KV D+ S+ FGFV +E+ +AQ AI
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINT 157
Query: 303 MNGCQLGGKKLKV 315
MNG L +K+ V
Sbjct: 158 MNGMLLNDRKVFV 170
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 238 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 297
G P A+L++ + + + L F G +LS +V D AT S + +++++ PA A+
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 298 NAIAMMNGCQLGGKKLKVQL-KRD 320
A+ MN L G+ +++ +RD
Sbjct: 67 RALDTMNFEMLKGQPIRIMWSQRD 90
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
LP +V E + LFS +G + ++++R + S+ F+ +E E+A A+ +NGK
Sbjct: 198 LPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGK--- 254
Query: 62 EGSSVPLVVKWADTEKERQ 80
E S L A ERQ
Sbjct: 255 EVSGRLLYAGRAQKRVERQ 273
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L ++ + ++ FS YG I +++ SKG F+ + + E+A A+ +NG ++
Sbjct: 301 LDDSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNG--RI 357
Query: 62 EGSSVPLVVKWADTEKERQA 81
G+ PL V A ++ER+A
Sbjct: 358 VGTK-PLYVALAQRKEERKA 376
>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3
PE=2 SV=1
Length = 660
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P N+++ ++P+E G+ EL F FG + SA V D+ +G S+CFGFV++E +A +
Sbjct: 226 PRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAAS 284
Query: 299 AIAMMNGCQLGGKKLKV 315
A+ MNG LG L V
Sbjct: 285 AVEKMNGISLGDDVLYV 301
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 20/131 (15%)
Query: 201 LGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGN 260
L + PL + P + ++N +PST SG N+FI ++ ++ L
Sbjct: 109 LNYTPLFDRP--IRIMLSNRDPSTRLSGK------------GNIFIKNLDASIDNKALFE 154
Query: 261 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV----- 315
F +FG +LS KV +D TG SK +GFV +E SAQ AI +NG + K++ V
Sbjct: 155 TFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIR 213
Query: 316 QLKRDNKQNKP 326
+ +R +N P
Sbjct: 214 RQERARDENTP 224
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 235 QIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 294
+ E GANL++ ++ D++L F +G V S+KV ++ G+S+ FGFV+Y +P
Sbjct: 325 RFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLN-PQGMSRGFGFVAYSNPE 383
Query: 295 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 327
A A++ MNG +G K L + L + + + +
Sbjct: 384 EALRALSEMNGKMIGRKPLYIALAQRKEDRRAH 416
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L +V + ++ +FS YG + +++ Q S+G F+ Y E+AL AL +NG KM
Sbjct: 339 LDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNG--KM 396
Query: 62 EGSSVPLVVKWADTEKERQA 81
G PL + A +++R+A
Sbjct: 397 IGRK-PLYIALAQRKEDRRA 415
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAING 57
L ++ + FS +GTI ++ SKG F+++E +E A AA++ +NG
Sbjct: 143 LDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNG 198
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAIN 56
L V+EA + LF + +++ R + S G A++ + A A+EA+N
Sbjct: 56 LDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEALN 110
>sp|Q9LIS2|RBG4_ARATH Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis
thaliana GN=RBG4 PE=2 SV=1
Length = 136
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
+ LF+ + D L AF +FG V A V D+ TG S+ FGFVS+ SA NAI
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 302 MMNGCQLGGKKLKVQL 317
M+G +L G++++V L
Sbjct: 95 EMDGKELNGRQIRVNL 110
>sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1
Length = 360
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P N+N S+ G + NL + ++PQ +EL + F + G + S K+
Sbjct: 18 PTTVNNNCSSPVDSGNTEDSK------TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLV 71
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
DK TG S +GFV+Y P A+ AI +NG +L K +KV R
Sbjct: 72 RDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 116
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
ANL++ +P+ +EL F +GR++++++ VD+ TG+S+ GF+ ++ A+ AI
Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184
Query: 302 MMNG 305
+NG
Sbjct: 185 GLNG 188
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 134/336 (39%), Gaps = 34/336 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
LP+N+++ E+ +LF G I+ +++R S G F+ Y + A A+ +NG
Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG--- 102
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN----NLPNADSQHP-----SLFGALPMG 111
+ L K T K AR + + AN LP +Q S +G +
Sbjct: 103 -----LRLQTK---TIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 112 YAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRN 171
G + R+ + G +G PP GA+ ++ N
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPP--------GATEPITVKFA-NN 205
Query: 172 YAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 231
+ + + S P +YP P R L+N + +P T +
Sbjct: 206 PSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFR-LDNLLNMAYGVKSRFSPMTIDGMTSL 264
Query: 232 SGGQIEGPPGAN--LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+G I G PG +F+Y++ + + L F FG V + KV D T K FGFV+
Sbjct: 265 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 324
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
+ A AIA +NG +LG + L+V K NK +K
Sbjct: 325 MTNYDEAAMAIASLNGYRLGDRVLQVSFK-TNKTHK 359
>sp|Q5R9Z6|ELAV2_PONAB ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1
Length = 359
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P N+N S+ G + NL + ++PQ +EL + F + G + S K+
Sbjct: 18 PTTINNNCSSPVDSGNTEDSK------TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLV 71
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
DK TG S +GFV+Y P A+ AI +NG +L K +KV R
Sbjct: 72 RDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 116
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
ANL++ +P+ +EL F +GR++++++ VD+ TG+S+ GF+ ++ A+ AI
Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184
Query: 302 MMNG 305
+NG
Sbjct: 185 GLNG 188
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 35/336 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
LP+N+++ E+ +LF G I+ +++R S G F+ Y + A A+ +NG +
Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG-LR 104
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN----NLPNADSQHP-----SLFGALPMG 111
++ ++ K AR + + AN LP +Q S +G +
Sbjct: 105 LQTKTI----------KVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 112 YAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRN 171
G + R+ + G +G PP GA+ ++ N
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPP--------GATEPITVKFA-NN 205
Query: 172 YAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 231
+ + + S P +YP P R ++ +++ V +P T +
Sbjct: 206 PSQKTNQAILSQLYQSPNRRYPGPL--AQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSL 263
Query: 232 SGGQIEGPPGAN--LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+G I G PG +F+Y++ + + L F FG V + KV D T K FGFV+
Sbjct: 264 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 323
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
+ A AIA +NG +LG + L+V K NK +K
Sbjct: 324 MTNYDEAAMAIASLNGYRLGDRVLQVSFK-TNKTHK 358
>sp|Q12926|ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2
Length = 359
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 215 PAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 274
P N+N S+ G + NL + ++PQ +EL + F + G + S K+
Sbjct: 18 PTTINNNCSSPVDSGNTEDSK------TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLV 71
Query: 275 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 319
DK TG S +GFV+Y P A+ AI +NG +L K +KV R
Sbjct: 72 RDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 116
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
ANL++ +P+ +EL F +GR++++++ VD+ TG+S+ GF+ ++ A+ AI
Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184
Query: 302 MMNG 305
+NG
Sbjct: 185 GLNG 188
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 35/336 (10%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHK 60
LP+N+++ E+ +LF G I+ +++R S G F+ Y + A A+ +NG +
Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG-LR 104
Query: 61 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN----NLPNADSQHP-----SLFGALPMG 111
++ ++ K AR + + AN LP +Q S +G +
Sbjct: 105 LQTKTI----------KVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 112 YAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRN 171
G + R+ + G +G PP GA+ ++ N
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPP--------GATEPITVKFA-NN 205
Query: 172 YAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 231
+ + + S P +YP P R ++ +++ V +P T +
Sbjct: 206 PSQKTNQAILSQLYQSPNRRYPGPL--AQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSL 263
Query: 232 SGGQIEGPPGAN--LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 289
+G I G PG +F+Y++ + + L F FG V + KV D T K FGFV+
Sbjct: 264 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 323
Query: 290 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 325
+ A AIA +NG +LG + L+V K NK +K
Sbjct: 324 MTNYDEAAMAIASLNGYRLGDRVLQVSFK-TNKTHK 358
>sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAB1 PE=3
SV=1
Length = 661
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 82/194 (42%), Gaps = 30/194 (15%)
Query: 123 ASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSS-NMGPRNYAMPPSGFVG 181
A S L L P N+ I P+ Q ++R +S ++G YA +
Sbjct: 63 AENSASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLG---YAYVNYHKLE 119
Query: 182 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 241
G A+ L Y P+ P + + +PS SG
Sbjct: 120 DGEKAIEELNYT-----------PVEGRPCRI--MWSQRDPSARRSGD------------ 154
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N+FI ++ ++ L + F AFG++LS KV D G SKCFGFV YE+ +AQ AI
Sbjct: 155 GNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDD-LGQSKCFGFVHYETEEAAQAAIE 213
Query: 302 MMNGCQLGGKKLKV 315
+NG L +++ V
Sbjct: 214 SVNGMLLNDREVYV 227
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NLF+ ++ ++ ++L F+ FG + S+KV VD A G SK FGFV + +P A AI
Sbjct: 350 GVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDA-GKSKGFGFVCFSTPEEATKAI 408
Query: 301 AMMNGCQLGGKKLKVQL 317
MN + GK L V L
Sbjct: 409 TEMNQRMVNGKPLYVAL 425
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK-ATGVSKCFGFVSYESPASAQNAI 300
N+++ +I + ++E F FG++ S ++++K A G SK FGFV++E +A A+
Sbjct: 248 TNIYVKNIDLAYTEKEFEELFAPFGKITS--IYLEKDAEGKSKGFGFVNFEEHEAAAKAV 305
Query: 301 AMMNGCQLGGKKLKV---QLKRDNKQ 323
+N ++ G+K+ V Q KR+ +
Sbjct: 306 EELNDKEINGQKIYVGRAQKKRERTE 331
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 7 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 66
+E E LF+ +G I + + + ++ SKG F+ +E E A A+E +N K E +
Sbjct: 260 TEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDK---EINGQ 316
Query: 67 PLVVKWADTEKER 79
+ V A ++ER
Sbjct: 317 KIYVGRAQKKRER 329
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 15 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAING 57
FS +G I +++ SK F+ YET+E A AA+E++NG
Sbjct: 175 FSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNG 217
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L + + ++ F +GTI +++ SKG F+ + T E+A A+ +N +
Sbjct: 358 LDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMV- 416
Query: 62 EGSSVPLVVKWADTEKERQARRAQ-KAQSQANNLPNADSQHPSLFGALPMGYAPP 115
+ PL V A + + RR+Q + Q QA N Q+ + G LP + PP
Sbjct: 417 --NGKPLYVALA---QRKDVRRSQLEQQIQARN--QMRMQNAAAAGGLPGQFMPP 464
Score = 31.6 bits (70), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 214 SPAVANSNPSTSSSGGTGSGGQIEGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 273
S A ++S P+ S+ S G E A+L++ + + L F G+V S +V
Sbjct: 41 SDATSSSVPADSAEEQGESSGIAEN--SASLYVGELNPSVNEATLFEIFSPIGQVASIRV 98
Query: 274 FVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL-KRD 320
D + S + +V+Y + AI +N + G+ ++ +RD
Sbjct: 99 CRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRD 146
>sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=PAB1 PE=3 SV=1
Length = 651
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NL++ +IP+ + D+ L F FG + S K+ + +GVS+ FGFV Y +P A A+
Sbjct: 329 GVNLYLKNIPESYDDERLREEFAPFGAITSCKI-MRAPSGVSRGFGFVCYSAPEEANKAV 387
Query: 301 AMMNGCQLGGKKLKVQL 317
+ MNG L + L V L
Sbjct: 388 SEMNGKMLDNRPLYVAL 404
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+FI ++ ++ L + F AFG +LS KV ++ TG S +GFV YE+ +A+ AI
Sbjct: 136 NIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNE-TG-SLGYGFVHYETAEAAEAAIKH 193
Query: 303 MNGCQLGGKKLKV--QLKRDNKQNK 325
+NG L KK+ V + R +Q K
Sbjct: 194 VNGMLLNDKKVYVGHHIPRKERQAK 218
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N++ ++ E D E F FG++ S + D+ G SK FGFV++E AQ A+
Sbjct: 227 TNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDE-DGKSKGFGFVNFEDHNEAQKAVD 285
Query: 302 MMNGCQLGGKKLKV 315
++ G+KL V
Sbjct: 286 ELHDSDFKGQKLFV 299
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 6 VSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 65
V++ E LF+ +G I + R SKG F+ +E +A A++ ++ +G
Sbjct: 238 VTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELH-DSDFKGQK 296
Query: 66 VPLVVKWADTEKERQARRAQKA 87
+ + +E+E + RR+ +A
Sbjct: 297 LFVARAQKKSEREEELRRSYEA 318
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
+P++ + + F+ +G I +I+R S+G F+ Y E+A A+ +NGK
Sbjct: 337 IPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKML- 395
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQ 90
+ PL V A +R+ R Q+ ++Q
Sbjct: 396 --DNRPLYVALA----QRKDVRRQQLEAQ 418
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2
Length = 732
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 243 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 302
N+FI ++ ++ L + F AFG +LS KV D+ GVSK +GFV YE+ +A NAI
Sbjct: 131 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDE-FGVSKGYGFVHYETAEAANNAIKH 189
Query: 303 MNGCQLGGKKLKV--QLKRDNKQNK 325
+NG L KK+ V + + ++Q+K
Sbjct: 190 VNGMLLNDKKVFVGHHISKKDRQSK 214
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N++I +I E D+E F+ FG + SA + D + G S+ FGFV++ + SAQ A+
Sbjct: 223 TNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRD-SEGKSRGFGFVNFSTHESAQAAVE 281
Query: 302 MMNGCQLGGKKLKV 315
MN ++ +KL V
Sbjct: 282 EMNDKEVRSQKLYV 295
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 42/127 (33%), Gaps = 50/127 (39%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA---------------------- 278
G NL++ ++ + D +L F +G + SAKV D A
Sbjct: 325 GVNLYVKNLTDDVDDDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKA 384
Query: 279 ----------------------------TGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 310
G SK FGFV + SP A A+ MN + G
Sbjct: 385 AEGEKEPAAEEKEKEEKKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG 444
Query: 311 KKLKVQL 317
K L V L
Sbjct: 445 KPLYVAL 451
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 239 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 298
P A+L++ + + L F + G+V S +V D T S + +V+Y A +
Sbjct: 39 PHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGER 98
Query: 299 AIAMMNGCQLGGKKLKVQL-KRD 320
A+ +N + GK ++ +RD
Sbjct: 99 ALDELNYTLIKGKPCRIMWSQRD 121
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 15 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 74
F+ +G I ++ + SKG F+ YET E A A++ +NG M + + V
Sbjct: 150 FAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNG---MLLNDKKVFVGHHI 206
Query: 75 TEKERQAR 82
++K+RQ++
Sbjct: 207 SKKDRQSK 214
>sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=PAB1 PE=3
SV=1
Length = 629
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 241 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 300
G NLF+ ++ ++L F+ FG + SAKV VD+A G SK FGFV + +P A AI
Sbjct: 335 GVNLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEA-GKSKGFGFVCFTTPEEATKAI 393
Query: 301 AMMNGCQLGGKKLKVQL 317
MN + GK L V L
Sbjct: 394 TEMNTRMINGKPLYVAL 410
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 32/206 (15%)
Query: 123 ASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSS-NMGPRNYAMPPSGFVG 181
A S L L P N+ I P+ Q +++R +S ++G YA
Sbjct: 48 AENSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLG---YAYVNYHKYE 104
Query: 182 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEGPPG 241
G A+ L Y P+ P + + +PS SG
Sbjct: 105 DGEKAIEELNY-----------NPIEGRPCRI--MWSQRDPSARRSGD------------ 139
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N+FI ++ ++ L + F AFG++LS KV D+ G SKCFGFV YE+ +A+ AI
Sbjct: 140 GNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDE-FGQSKCFGFVHYETAEAAEAAIE 198
Query: 302 MMNGCQLGGKKLKV--QLKRDNKQNK 325
+NG L +++ V + + ++++K
Sbjct: 199 NVNGMLLNDREVFVGKHISKKDRESK 224
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 242 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 301
N+++ +I + ++ F FG++ S + D+ G SK FGFV++E SA A+
Sbjct: 233 TNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQ-DGKSKGFGFVNFEDHESAVKAVE 291
Query: 302 MMNGCQLGGKKLKV---QLKRD 320
+N ++ G+K+ V Q KR+
Sbjct: 292 ELNDKEINGQKIYVGRAQKKRE 313
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 5 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 64
N SE LFS +G I + + + SKG F+ +E E A+ A+E +N K E +
Sbjct: 243 NYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDK---EIN 299
Query: 65 SVPLVVKWADTEKER 79
+ V A ++ER
Sbjct: 300 GQKIYVGRAQKKRER 314
Score = 34.7 bits (78), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 2 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 61
L + ++ F +GTI +++ SKG F+ + T E+A A+ +N + +
Sbjct: 343 LDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRM-I 401
Query: 62 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPP 115
G PL V A + R+++ Q+ Q++ N + G LP + PP
Sbjct: 402 NGK--PLYVALAQRKDVRRSQLEQQIQAR-----NQMRMQNAAAGGLPGQFIPP 448
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,482,600
Number of Sequences: 539616
Number of extensions: 6520864
Number of successful extensions: 19617
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 634
Number of HSP's that attempted gapping in prelim test: 16297
Number of HSP's gapped (non-prelim): 3535
length of query: 327
length of database: 191,569,459
effective HSP length: 118
effective length of query: 209
effective length of database: 127,894,771
effective search space: 26730007139
effective search space used: 26730007139
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)