BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020375
(327 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 17 LDSV--CGSNEEGTRFSSAFDDASA---MTLWRYVDIFWKIKKLLNIGSEA------RLK 65
LD++ CG N RF+S + D +++ R +D + N A + +
Sbjct: 150 LDTIGLCGFN---YRFNSFYRDQPHPFIISMIRALDEVMNKLQRANPDDPAYDENKRQFQ 206
Query: 66 QRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDI------ 117
+ I+V++ V KII RK + + D D+L++ L DP+ +
Sbjct: 207 EDIKVMNDLVDKIIADRKASGEQSD-----------DLLTQMLNGKDPETGEPLDDGNIS 255
Query: 118 --ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISE 175
I+ F+IAG +TT+ LS+ +Y L K+P V +K+ +E V S
Sbjct: 256 YQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL----------VDPVPSY 305
Query: 176 EALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKF 235
+ ++++ Y+ + E LRL+P P + D L + + KGD V + R K
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKT 365
Query: 236 IWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 295
IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L F
Sbjct: 366 IWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 296 KF 297
F
Sbjct: 422 DF 423
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 207 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 255
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 256 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 305
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P VP + D L + + KGD + + R
Sbjct: 306 PSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 365
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 366 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 421
Query: 293 SCFKF 297
F F
Sbjct: 422 KHFDF 426
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+GK+FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGKQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 210 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLHGKDPETGEPLDDE 258
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 259 NIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL----------VDPV 308
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 309 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHR 368
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 369 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 424
Query: 293 SCFKF 297
F F
Sbjct: 425 KHFDF 429
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 253
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 254 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 303
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 304 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 293 SCFKF 297
F F
Sbjct: 420 KHFDF 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 207 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 255
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 256 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 305
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 306 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 365
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 366 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 421
Query: 293 SCFKF 297
F F
Sbjct: 422 KHFDF 426
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 253
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 254 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 303
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 304 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 293 SCFKF 297
F F
Sbjct: 420 KHFDF 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 207 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 255
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 256 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 305
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 306 PSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 365
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 366 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 421
Query: 293 SCFKF 297
F F
Sbjct: 422 KHFDF 426
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 253
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 254 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 303
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 304 PSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 293 SCFKF 297
F F
Sbjct: 420 KHFDF 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG ++T+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 253
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG ++T+ LS+ +Y L K+P V +K +E V
Sbjct: 254 NIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 303
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 304 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 293 SCFKF 297
F F
Sbjct: 420 KHFDF 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F + G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQH----AFKPYGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG ++T+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 253
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 254 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 303
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 304 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C G++FA + + ++L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACPGQQFALHEATLVLGMML 419
Query: 293 SCFKF 297
F F
Sbjct: 420 KHFDF 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG + T+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG + T+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACEGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG + T+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG + T+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+I G +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+I G +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+I G +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+I G +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+I G +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+I G +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F + G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPWGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPHGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY------- 113
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLHGKDPETGEPLDDE 253
Query: 114 -LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ L++ +Y L K+P V +K +E V
Sbjct: 254 NIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL----------VDPV 303
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LR++P P + D L + + KGD + + R
Sbjct: 304 PSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHR 363
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K +WGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 364 DKTVWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 293 SCFKF 297
F F
Sbjct: 420 KHFDF 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPAGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ +IAG +TT+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 40/311 (12%)
Query: 4 TLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEAR 63
++D I +FGV +DS+ + ++ + + ++D F+ L+I
Sbjct: 160 SMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----LSITVFPF 208
Query: 64 LKQRIEVIDTFVY-----KIIRKKTDQMHDFQEEYTSMKKEDILSRFL------QVTDPK 112
L +EV++ V+ +RK +M + + E T + D L + + K
Sbjct: 209 LIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHK 268
Query: 113 YLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFL 167
L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+ K +
Sbjct: 269 ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY- 327
Query: 168 KVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQA 227
+ + +M YL + ETLRL+P ++C D + +G + KG +V +
Sbjct: 328 --------DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKGVVVMIPS 378
Query: 228 YAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIY 287
YA+ R W + E+F PER+ +N P+ +T F +GPR C+G FA MK+
Sbjct: 379 YALHRDPKYW-TEPEKFLPERFSKKNK--DNIDPYIYTPFGSGPRNCIGMRFALMNMKLA 435
Query: 288 SAVLLSCFKFR 298
+L F F+
Sbjct: 436 LIRVLQNFSFK 446
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 40/311 (12%)
Query: 4 TLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEAR 63
++D I +FGV +DS+ + ++ + + ++D F+ L+I
Sbjct: 159 SMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----LSITVFPF 207
Query: 64 LKQRIEVIDTFVY-----KIIRKKTDQMHDFQEEYTSMKKEDILSRFL------QVTDPK 112
L +EV++ V+ +RK +M + + E T + D L + + K
Sbjct: 208 LIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHK 267
Query: 113 YLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFL 167
L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+ K +
Sbjct: 268 ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY- 326
Query: 168 KVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQA 227
+ + +M YL + ETLRL+P ++C D + +G + KG +V +
Sbjct: 327 --------DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKGVVVMIPS 377
Query: 228 YAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIY 287
YA+ R W + E+F PER+ +N P+ +T F +GPR C+G FA MK+
Sbjct: 378 YALHRDPKYW-TEPEKFLPERFSKKNK--DNIDPYIYTPFGSGPRNCIGMRFALMNMKLA 434
Query: 288 SAVLLSCFKFR 298
+L F F+
Sbjct: 435 LIRVLQNFSFK 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 40/311 (12%)
Query: 4 TLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEAR 63
++D I +FGV +DS+ + ++ + + ++D F+ L+I
Sbjct: 158 SMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----LSITVFPF 206
Query: 64 LKQRIEVIDTFVY-----KIIRKKTDQMHDFQEEYTSMKKEDILSRFL------QVTDPK 112
L +EV++ V+ +RK +M + + E T + D L + + K
Sbjct: 207 LIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHK 266
Query: 113 YLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFL 167
L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+ K +
Sbjct: 267 ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY- 325
Query: 168 KVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQA 227
+ + +M YL + ETLRL+P ++C D + +G + KG +V +
Sbjct: 326 --------DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKGVVVMIPS 376
Query: 228 YAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIY 287
YA+ R W + E+F PER+ +N P+ +T F +GPR C+G FA MK+
Sbjct: 377 YALHRDPKYW-TEPEKFLPERFSKKNK--DNIDPYIYTPFGSGPRNCIGMRFALMNMKLA 433
Query: 288 SAVLLSCFKFR 298
+L F F+
Sbjct: 434 LIRVLQNFSFK 444
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+ AG + T+ LS+ +Y L K+P V +K +E V
Sbjct: 253 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 253
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+ AG + T+ LS+ +Y L K+P V +K +E V
Sbjct: 254 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL----------VDPV 303
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 304 PSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 293 SCFKF 297
F F
Sbjct: 420 KHFDF 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 253
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+ AG + T+ LS+ +Y L K+P +K +E V
Sbjct: 254 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL----------VDPV 303
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 304 PSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K +WGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 364 DKTVWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 293 SCFKF 297
F F
Sbjct: 420 KHFDF 424
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
Query: 63 RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK-------- 112
+ ++ I+V++ V KII RK + + D D+L+ L DP+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLLTHMLNGKDPETGEPLDDE 252
Query: 113 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 172
+R I+ F+ AG + T+ LS+ +Y L K+P +K +E V
Sbjct: 253 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL----------VDPV 302
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
S + ++++ Y+ + E LRL+P P + D L + + KGD + + R
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 233 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 292
K IWGDD EEF+PER+ + + I Q F F G R C+G++FA + + ++L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 293 SCFKF 297
F F
Sbjct: 419 KHFDF 423
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 35/304 (11%)
Query: 3 STLDSIFKVAFGVELDSVCGSNE---EGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIG 59
+ +D + K AFG+E + G+ + + + AS TL +++ K K+L +
Sbjct: 139 TAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLP--GKRKQLREV- 195
Query: 60 SEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV----TDPKYLR 115
++ I + ++++ + + +E DIL++ L+ D + L
Sbjct: 196 -----RESIRFLRQVGRDWVQRRREALKRGEE-----VPADILTQILKAEEGAQDDEGLL 245
Query: 116 DIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISE 175
D + F IAG +T+A L++ + L + P + ++ EV E G+K DF
Sbjct: 246 DNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDF--------- 296
Query: 176 EALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKF 235
E L ++ YL + E+LRLYP ++ ++TL DG V + + Y MGRM
Sbjct: 297 EDLGRLQYLSQVLKESLRLYPPAWGTFRL-LEEETLIDGVRVPGNTPLLFSTYVMGRMD- 354
Query: 236 IWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 295
+ +D F P+R+ G + F + F G R C+G++FA ++K+ A LL
Sbjct: 355 TYFEDPLTFNPDRF----GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRL 410
Query: 296 KFRL 299
+FRL
Sbjct: 411 EFRL 414
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 29/272 (10%)
Query: 50 WKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVT 109
W + L + S R + I YK I+K+ QE K +DIL L T
Sbjct: 191 WLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS----QE-----KIDDILQTLLDAT 241
Query: 110 --DPKYLRD-----IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKD 162
D + L D +++ ++AG+ T++ T +W + L + +Q+K E K G
Sbjct: 242 YKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN- 300
Query: 163 ISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDM 222
++ + L+ ++ L I ETLRL P + + +M + T+ G+++ G
Sbjct: 301 -------LPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQ 352
Query: 223 VCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYR 282
VC R+K W + + F P+R+L +N ++ F + F AG C+G+ FAY
Sbjct: 353 VCVSPTVNQRLKDSWVERLD-FNPDRYLQDNPASGEK--FAYVPFGAGRHRCIGENFAYV 409
Query: 283 QMKIYSAVLLSCFKFRL-RNVSETVNYRTMIN 313
Q+K + +L ++F L TVNY TMI+
Sbjct: 410 QIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIH 441
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 34/258 (13%)
Query: 47 DIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRK-----KTDQMHDFQEEYTSMKKEDI 101
DIF+KI L E +K + I+ + + R+ K ++ DF E +K
Sbjct: 232 DIFFKISWLYK-KYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGD 290
Query: 102 LSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAK 161
L+R + + IL +IA DT + +L + ++++ KHP V+E I++E++ G +
Sbjct: 291 LTR-------ENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGER 343
Query: 162 DISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGD 221
DI + ++K+ + I E++R P V + + DD + DG+ V+KG
Sbjct: 344 DIKI----------DDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGT 392
Query: 222 MVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFK-FTAFQAGPRICLGKEFA 280
+ M R++F KP + EN F K P++ F F GPR C GK A
Sbjct: 393 NIILNIGRMHRLEFFP-------KPNEFTLEN--FAKNVPYRYFQPFGFGPRGCAGKYIA 443
Query: 281 YRQMKIYSAVLLSCFKFR 298
MK LL F +
Sbjct: 444 MVMMKAILVTLLRRFHVK 461
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 114 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 173
L+D IL + AG +T + LS F +L +H ++E++ QE + L+++ +
Sbjct: 244 LKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNK----------LQLSQEL 293
Query: 174 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 233
+ E L+KM YL + E LRL P V + D GF KG +V YQ
Sbjct: 294 TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHAD 352
Query: 234 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 293
++ D E+F PER+ +G PF F G R CLGKEFA +MK+++ L+
Sbjct: 353 PDLY-PDPEKFDPERF-TPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQ 410
Query: 294 CFKFRL 299
F + L
Sbjct: 411 QFDWTL 416
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 94 TSMKKEDILSRFLQVTD-------PKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAV 146
+ K +D+L+ L+ D + + D ++ + G +T A+T+ W + L HP
Sbjct: 237 SGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEH 296
Query: 147 QEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCF 206
++I EV+ TG + ++ F E + K+ + I E +RL PAV V +
Sbjct: 297 ADRIRDEVEAVTGGRPVA-F---------EDVRKLRHTGNVIVEAMRLRPAVWVLTRRAV 346
Query: 207 SDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTA 266
++ L G+ + G + Y YA+ R + DD EF P+RWL E + +
Sbjct: 347 AESEL-GGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPERAANVPK--YAMKP 402
Query: 267 FQAGPRICLGKEFAYRQMKIYSAVLLSCFKF 297
F AG R C F+ Q+ + +A L + ++F
Sbjct: 403 FSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 117/278 (42%), Gaps = 26/278 (9%)
Query: 30 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRK-----KTD 84
FS + A++ +++ Y W +L G +L + V+ F+ ++I K K
Sbjct: 188 FSENVELAASASVFLYNAFPWI--GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ 245
Query: 85 QMHDFQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLC 141
F + Y K D S F + + L + +IAG +TT L W I +
Sbjct: 246 LPQHFVDAYLDEMDQGKNDPSSTFSK----ENLIFSVGELIIAGTETTTNVLRWAILFMA 301
Query: 142 KHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVD 201
+P +Q ++ +E+ G G S + KM Y A + E LR VP+
Sbjct: 302 LYPNIQGQVQKEIDLIMGPN---------GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 202 AKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESP 261
S+D + G+S+ KG V Y++ + W D E F PER+LD +G F K+
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSGYFAKKE- 410
Query: 262 FKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRL 299
F G R CLG+ A +M ++ LL F
Sbjct: 411 -ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF 447
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
Query: 112 KYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAG 171
K L + +A +TTA +L W +Y L ++P Q +++QEV+ L
Sbjct: 282 KELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQ---------SVLPDNQ 332
Query: 172 CISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMG 231
E L M YL A + E++RL P+VP + T+ +++ KG ++ +G
Sbjct: 333 TPRAEDLRNMPYLKACLKESMRLTPSVPFTTR-TLDKPTVLGEYALPKGTVLTLNTQVLG 391
Query: 232 RMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKI 286
+ + +D+ +F+PERWL + +K +PF F G R+C+G+ A Q+ +
Sbjct: 392 SSEDNF-EDSHKFRPERWLQKE---KKINPFAHLPFGIGKRMCIGRRLAELQLHL 442
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 26/274 (9%)
Query: 30 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRK-----KTD 84
FS + A++ +++ Y W +L G +L + V+ F+ ++I K K
Sbjct: 188 FSENVELAASASVFLYNAFPWI--GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ 245
Query: 85 QMHDFQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLC 141
F + Y K D S F + + L + +IAG +TT L W I +
Sbjct: 246 LPQHFVDAYLDEMDQGKNDPSSTFSK----ENLIFSVGELIIAGTETTTNVLRWAILFMA 301
Query: 142 KHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVD 201
+P +Q ++ +E+ G G S + KM Y A + E LR VP+
Sbjct: 302 LYPNIQGQVQKEIDLIMGPN---------GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 202 AKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESP 261
S+D + G+S+ KG V Y++ + W D E F PER+LD +G F K+
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSGYFAKKE- 410
Query: 262 FKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 295
F G R CLG+ A +M ++ LL F
Sbjct: 411 -ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 63 RLKQRIEVIDTFVYKIIRKKTDQMHDFQ---------EEYTSMKKEDILSRFLQVTDPKY 113
RLKQ IE D V K +R+ + M Q + + E+ + L+ +
Sbjct: 224 RLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLE----GH 279
Query: 114 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC- 172
+ +++ I G +TTA+TLSW + L HP +Q ++ +E+ G A C
Sbjct: 280 VHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPG--------ASCS 331
Query: 173 -ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMG 231
++ + ++ L+A I E LRL P VP+ + + G+ + +G +V
Sbjct: 332 RVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAH 391
Query: 232 RMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVL 291
+ +W + EF+P+R+L+ +P AF G R+CLG+ A ++ + A L
Sbjct: 392 LDETVW-EQPHEFRPDRFLEPGA-----NPSAL-AFGCGARVCLGESLARLELFVVLARL 444
Query: 292 LSCFKF 297
L F
Sbjct: 445 LQAFTL 450
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 114 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 173
LR ++ + AG TT+ TL+W + ++ HP VQ ++ QE+ + G + +
Sbjct: 273 LRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE-------M 325
Query: 174 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 233
++A M Y A I E R VP+ S D GF + KG + ++ +
Sbjct: 326 GDQA--HMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 234 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 293
+ +W + F PE +LD G F K P F F AG R CLG+ A ++ ++ LL
Sbjct: 384 EAVW-EKPFRFHPEHFLDAQGHFVK--PEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 294 CFKF 297
F F
Sbjct: 441 HFSF 444
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 114 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 173
LR ++ + AG TT+ TL+W + ++ HP VQ ++ QE+ + G + +
Sbjct: 273 LRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE-------M 325
Query: 174 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 233
++A M Y A I E R VP+ S D GF + KG + ++ +
Sbjct: 326 GDQA--HMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 234 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 293
+ +W + F PE +LD G F K P F F AG R CLG+ A ++ ++ LL
Sbjct: 384 EAVW-EKPFRFHPEHFLDAQGHFVK--PEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 294 CFKF 297
F F
Sbjct: 441 HFSF 444
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 118 ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEA 177
+ + AG +TT+ TL + + +L K+P ++EK+ +E+ G I I +
Sbjct: 272 VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIP-------AIKDR- 323
Query: 178 LEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC--YQAYAMGRMKF 235
++M Y+ A + E R VP + + DT+ G+ + KG +V + +F
Sbjct: 324 -QEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEF 382
Query: 236 IWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 295
D E+FKPE +L+ENG F+ FK F G R+C G+ A ++ + +L F
Sbjct: 383 ---PDPEKFKPEHFLNENGKFKYSDYFK--PFSTGKRVCAGEGLARMELFLLLCAILQHF 437
Query: 296 KFR 298
+
Sbjct: 438 NLK 440
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 22/230 (9%)
Query: 73 TFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAAT 132
TF IR TD + + +E + ++ Q++D K + +I+L+ AG DT
Sbjct: 245 TFEKGHIRDITDSLIEHCQEKQLDENANV-----QLSDEKII-NIVLDLFGAGFDTVTTA 298
Query: 133 LSWFIYMLCKHPAVQEKIVQEVKEATGA---KDISDFLKVAGCISEEALEKMHYLHAAIT 189
+SW + L +P VQ KI +E+ G +SD + Y+ A I
Sbjct: 299 ISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSD------------RSHLPYMEAFIL 346
Query: 190 ETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERW 249
ET R VP + DT GF + KG V + + + +W + +E F PER+
Sbjct: 347 ETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSE-FLPERF 405
Query: 250 LDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRL 299
L +G K K F G R C+G+ A ++ ++ A+LL +F +
Sbjct: 406 LTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSV 455
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 183
AG +TT + + W + L +P V++K+ +E+ + G IS+ ++
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG-------FSRTPTISDR--NRLLL 334
Query: 184 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 243
L A I E LRL P P+ + D+ F+V KG V +A+ + W ++
Sbjct: 335 LEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEW-HQPDQ 393
Query: 244 FKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRL 299
F PER+L+ G + F AGPR C+G+ A +++ + A LL F +
Sbjct: 394 FMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEV 449
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 113 YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKV 169
YL++++ LN I G +T + TL + +L KHP V+ K+ +E+ G F
Sbjct: 265 YLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF--- 321
Query: 170 AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 229
E KM Y+ A I E R +P+ DT F + KG V +
Sbjct: 322 ------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGS 375
Query: 230 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSA 289
+ R + + ++F P+ +L+E G F+K F F G R C G+ A ++ ++
Sbjct: 376 VLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNCFGEGLARMELFLFFT 432
Query: 290 VLLSCFKFR 298
++ F+ +
Sbjct: 433 TVMQNFRLK 441
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 33/235 (14%)
Query: 76 YKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY--LRDIILNFVIAGKDTTAATL 133
Y +R+K HD++ IL R L + + ++ + + G DTT+ TL
Sbjct: 245 YWELRQKGSVHHDYR---------GILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTL 295
Query: 134 SWFIYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEEALEKMHYLHAAITET 191
W +Y + ++ VQ+ + EV A D++ L++ L A+I ET
Sbjct: 296 QWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL-----------LKASIKET 344
Query: 192 LRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWL- 250
LRL+P + V + +D + + + +V YA+GR + D E F P RWL
Sbjct: 345 LRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFF-DPENFDPTRWLS 402
Query: 251 -DENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSE 304
D+N + F+ F G R CLG+ A +M I+ +L F+ ++++S+
Sbjct: 403 KDKNITY-----FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSD 452
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 29/234 (12%)
Query: 76 YKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY--LRDIILNFVIAGKDTTAATL 133
Y +R+K HD++ IL R L + + ++ + + G DTT+ TL
Sbjct: 242 YWELRQKGSVHHDYR---------GILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTL 292
Query: 134 SWFIYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEEALEKMHYLHAAITET 191
W +Y + ++ VQ+ + EV A D++ L++ L A+I ET
Sbjct: 293 QWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL-----------LKASIKET 341
Query: 192 LRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLD 251
LRL+P + V + +D + + + +V YA+GR + D E F P RWL
Sbjct: 342 LRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFF-DPENFDPTRWLS 399
Query: 252 ENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSET 305
++ + + F+ F G R CLG+ A +M I+ +L F+ ++++S+
Sbjct: 400 KD---KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDV 450
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 183
A +DT + L W + + ++P VQ ++ E+ + G + C+ ++ + Y
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLP-------CMGDQP--NLPY 340
Query: 184 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 243
+ A + E +R VPV + +T G+ + K +V +++ W + E
Sbjct: 341 VLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKW-PNPEN 399
Query: 244 FKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR 298
F P R+LD++G+ K+ + F G R C+G+E + Q+ ++ ++L FR
Sbjct: 400 FDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFR 454
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 113 YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKV 169
YL++++ LN AG +T + TL + +L KHP V+ K+ +E+ G F
Sbjct: 265 YLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF--- 321
Query: 170 AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 229
E KM Y+ A I E R +P+ DT F + KG V +
Sbjct: 322 ------EDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGS 375
Query: 230 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSA 289
+ R + + ++F P+ +L+E G F+K F F G R C G+ A ++ ++
Sbjct: 376 VLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNCFGEGLARMELFLFFT 432
Query: 290 VLLSCFKFR 298
++ F+ +
Sbjct: 433 TVMQNFRLK 441
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 113 YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKV 169
YL++++ LN AG +T + TL + +L KHP V+ K+ +E+ G F
Sbjct: 265 YLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF--- 321
Query: 170 AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 229
E KM Y A I E R +P+ + DT F + KG V +
Sbjct: 322 ------EDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGS 375
Query: 230 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSA 289
+ R + + +F P+ +LD+ G F+K F F G R C G+ A ++ ++
Sbjct: 376 VLRDPRFF-SNPRDFNPQHFLDKKGQFKKSD--AFVPFSIGKRYCFGEGLARMELFLFFT 432
Query: 290 VLLSCFKFR 298
++ F+F+
Sbjct: 433 TIMQNFRFK 441
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 46/255 (18%)
Query: 69 EVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDT 128
+ ID F+ K+ ++K +Q +F E L + + +AG +T
Sbjct: 244 DFIDCFLIKMEQEKDNQKSEFNIEN--------------------LVGTVADLFVAGTET 283
Query: 129 TAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAI 188
T+ TL + + +L KHP V K+ +E+ G + C+ + + M Y A +
Sbjct: 284 TSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHR-------SPCMQDRS--HMPYTDAVV 334
Query: 189 TETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAE-----E 243
E R VP + DT + + KG + M + + DD E
Sbjct: 335 HEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTI------MALLTSVLHDDKEFPNPNI 388
Query: 244 FKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR----L 299
F P +LD+NG F+K F F AG RIC G+ A ++ ++ +L F + L
Sbjct: 389 FDPGHFLDKNGNFKKSD--YFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDL 446
Query: 300 RNVSETVNYRTMINL 314
+N++ T + +++L
Sbjct: 447 KNLNTTAVTKGIVSL 461
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 15/189 (7%)
Query: 113 YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKV 169
YL++++ L I G +T + TL + +L KHP V+ K+ +E+ G F
Sbjct: 265 YLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF--- 321
Query: 170 AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 229
E KM Y+ A I E R +P+ DT F + KG V +
Sbjct: 322 ------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGS 375
Query: 230 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSA 289
+ R + + ++F P+ +L+E G F+K F F G R C G+ A ++ ++
Sbjct: 376 VLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNCFGEGLARMELFLFFT 432
Query: 290 VLLSCFKFR 298
++ F+ +
Sbjct: 433 TVMQNFRLK 441
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 15/189 (7%)
Query: 113 YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKV 169
YL++++ L I G +T + TL + +L KHP V+ K+ +E+ G F
Sbjct: 265 YLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF--- 321
Query: 170 AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 229
E KM Y+ A I E R +P+ DT F + KG V +
Sbjct: 322 ------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGS 375
Query: 230 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSA 289
+ R + + ++F P+ +L+E G F+K F F G R C G+ A ++ ++
Sbjct: 376 VLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNCFGEGLARMELFLFFT 432
Query: 290 VLLSCFKFR 298
++ F+ +
Sbjct: 433 TVMQNFRLK 441
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 15/189 (7%)
Query: 113 YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKV 169
YL++++ L + G +T + TL + +L KHP V+ K+ +E+ G F
Sbjct: 265 YLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF--- 321
Query: 170 AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 229
E KM Y+ A I E R +P+ DT F + KG V +
Sbjct: 322 ------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGS 375
Query: 230 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSA 289
+ R + + ++F P+ +L+E G F+K F F G R C G+ A ++ ++
Sbjct: 376 VLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNCFGEGLARMELFLFFT 432
Query: 290 VLLSCFKFR 298
++ F+ +
Sbjct: 433 TVMQNFRLK 441
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 35/244 (14%)
Query: 76 YKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDI---ILNFVIAGKDTTAAT 132
Y+ +R+KT+ + Y +K E +L L D+ I + G +TT+ T
Sbjct: 247 YQDLRRKTEFRNYPGILYCLLKSEKML-----------LEDVKANITEMLAGGVNTTSMT 295
Query: 133 LSWFIYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEEALEKMHYLHAAITE 190
L W +Y + + VQE + +EV A DIS L++ L A+I E
Sbjct: 296 LQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPL-----------LKASIKE 344
Query: 191 TLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWL 250
TLRL+P + SD L D + + +V YAMGR + ++F P RWL
Sbjct: 345 TLRLHPISVTLQRYPESDLVLQD-YLIPAKTLVQVAIYAMGRDPAFFS-SPDKFDPTRWL 402
Query: 251 DENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRT 310
++ F+ F G R C+G+ A +M ++ +L FK ++++ + T
Sbjct: 403 SKDKDLIH---FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQHIGDV---DT 456
Query: 311 MINL 314
+ NL
Sbjct: 457 IFNL 460
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 24/245 (9%)
Query: 59 GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILSRFLQVTD 110
G+ ++ + ++ I+TF+ + + K + DF + Y K D S F
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHH--- 266
Query: 111 PKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVA 170
+ L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 267 -QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-------P 318
Query: 171 GCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAM 230
+ + A KM Y A I E RL +P + DT G+ + K V + +
Sbjct: 319 PALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSS 375
Query: 231 GRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAV 290
+ + F P +LD NG ++ F F G RICLG+ A ++ ++
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICLGEGIARTELFLFFTT 433
Query: 291 LLSCF 295
+L F
Sbjct: 434 ILQNF 438
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 24/245 (9%)
Query: 59 GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILSRFLQVTD 110
G+ ++ + ++ I+TF+ + + K + DF + Y K D S F
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHH--- 266
Query: 111 PKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVA 170
+ L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 267 -QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-------P 318
Query: 171 GCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAM 230
+ + A KM Y A I E RL +P + DT G+ + K V + +
Sbjct: 319 PALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSS 375
Query: 231 GRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAV 290
+ + F P +LD NG ++ F F G RICLG+ A ++ ++
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICLGEGIARTELFLFFTT 433
Query: 291 LLSCF 295
+L F
Sbjct: 434 ILQNF 438
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 24/245 (9%)
Query: 59 GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILSRFLQVTD 110
G+ ++ + ++ I+TF+ + + K + DF + Y K D S F
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHH--- 266
Query: 111 PKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVA 170
+ L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 267 -QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-------P 318
Query: 171 GCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAM 230
+ + A KM Y A I E RL +P + DT G+ + K V + +
Sbjct: 319 PALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSS 375
Query: 231 GRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAV 290
+ + F P +LD NG ++ F F G RICLG+ A ++ ++
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICLGEGIARTELFLFFTT 433
Query: 291 LLSCF 295
+L F
Sbjct: 434 ILQNF 438
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 24/245 (9%)
Query: 59 GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILSRFLQVTD 110
G+ ++ + ++ I+TF+ + + K + DF + Y K D S F
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHH--- 266
Query: 111 PKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVA 170
+ L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 267 -QNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-------P 318
Query: 171 GCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAM 230
+ + A KM Y A I E RL +P + DT G+ + K V + +
Sbjct: 319 PALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSS 375
Query: 231 GRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAV 290
+ + F P +LD NG ++ F F G RICLG+ A ++ ++
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICLGEGIARTELFLFFTT 433
Query: 291 LLSCF 295
+L F
Sbjct: 434 ILQNF 438
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 36/230 (15%)
Query: 71 IDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTA 130
ID F+ K+ ++K +Q +F E + D+L AG +TT+
Sbjct: 247 IDCFLIKMEKEKQNQQSEFTIENLVITAADLLG--------------------AGTETTS 286
Query: 131 ATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITE 190
TL + + +L KHP V K+ +E++ G + C+ + M Y A + E
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVVGRNR-------SPCMQDRG--HMPYTDAVVHE 337
Query: 191 TLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAM--GRMKFIWGDDAEEFKPER 248
R +P + D + + KG + ++ +F + E F P
Sbjct: 338 VQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEF---PNPEMFDPRH 394
Query: 249 WLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR 298
+LDE G F+K + F F AG RIC+G+ A ++ ++ +L F +
Sbjct: 395 FLDEGGNFKKSN--YFMPFSAGKRICVGEGLARMELFLFLTFILQNFNLK 442
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 24/245 (9%)
Query: 59 GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILSRFLQVTD 110
G+ ++ + ++ I+TF+ + + K + DF + Y K D S F
Sbjct: 210 GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHH--- 266
Query: 111 PKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVA 170
+ L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 267 -QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-------P 318
Query: 171 GCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAM 230
+ + A KM Y A I E RL +P + DT G+ + K V + +
Sbjct: 319 PALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSS 375
Query: 231 GRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAV 290
+ + F P +LD NG ++ F F G RIC G+ A ++ ++
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICAGEGIARTELFLFFTT 433
Query: 291 LLSCF 295
+L F
Sbjct: 434 ILQNF 438
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 69 EVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDT 128
++IDT++ + ++K++ +F + ++ L+ AG +T
Sbjct: 244 DLIDTYLLHMEKEKSNAHSEFSHQNLNLN--------------------TLSLFFAGTET 283
Query: 129 TAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAI 188
T+ TL + ++ K+P V E++ +E+++ G + A KM Y A I
Sbjct: 284 TSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRA---------KMPYTEAVI 334
Query: 189 TETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPER 248
E R +P+ + T G+ + K D + + + + + F P+
Sbjct: 335 YEIQRFSDLLPMGVPHIVTQHTSFRGYIIPK-DTEVFLILSTALHDPHYFEKPDAFNPDH 393
Query: 249 WLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 295
+LD NG +K F F G RICLG+ A ++ ++ +L F
Sbjct: 394 FLDANGALKKTE--AFIPFSLGKRICLGEGIARAELFLFFTTILQNF 438
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 17/186 (9%)
Query: 116 DIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAK---DISDFLKVAGC 172
+++ + AG DT +SW + L P +Q KI +E+ G + +SD
Sbjct: 285 NLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSD------- 337
Query: 173 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 232
++ YL A I ET R +P + DT +GF + K V + +
Sbjct: 338 -----RPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNH 392
Query: 233 MKFIWGDDAEEFKPERWLDENGI-FQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVL 291
+W +D EF+PER+L +G K K F G R C+G+ A ++ ++ A+L
Sbjct: 393 DPELW-EDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAIL 451
Query: 292 LSCFKF 297
L +F
Sbjct: 452 LQQLEF 457
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 127 DTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHA 186
DTTA L ++ L ++P VQ+ + QE A A IS+ ++A ++ L A
Sbjct: 291 DTTAFPLLMTLFELARNPDVQQILRQESLAA--AASISEH-------PQKATTELPLLRA 341
Query: 187 AITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKP 246
A+ ETLRLYP V + + S D + + + G +V Y++GR ++ E + P
Sbjct: 342 ALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALF-PRPERYNP 399
Query: 247 ERWLDENGIFQKESPFKFTAFQAGPRICLGK 277
+RWLD G + F F G R CLG+
Sbjct: 400 QRWLDIRGSGRN---FHHVPFGFGMRQCLGR 427
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 44/234 (18%)
Query: 71 IDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTA 130
ID F+ K+ ++K +Q +F E L + ++ AG +TT+
Sbjct: 247 IDCFLMKMEKEKHNQPSEFTIES--------------------LENTAVDLFGAGTETTS 286
Query: 131 ATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITE 190
TL + + +L KHP V K+ +E++ G + C+ + + M Y A + E
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVIGRNR-------SPCMQDRS--HMPYTDAVVHE 337
Query: 191 TLR---LYPAVPVDAKMC---FSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEF 244
R L P A C F + +P G ++ ++ + +F + E F
Sbjct: 338 VQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTI----LISLTSVLHDNKEF---PNPEMF 390
Query: 245 KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR 298
P +LDE G F+K F F AG RIC+G+ A ++ ++ +L F +
Sbjct: 391 DPHHFLDEGGNFKKSK--YFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 442
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 44/234 (18%)
Query: 71 IDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTA 130
ID F+ K+ ++K +Q +F E L + ++ AG +TT+
Sbjct: 245 IDCFLMKMEKEKHNQPSEFTIES--------------------LENTAVDLFGAGTETTS 284
Query: 131 ATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITE 190
TL + + +L KHP V K+ +E++ G + C+ + + M Y A + E
Sbjct: 285 TTLRYALLLLLKHPEVTAKVQEEIERVIGRNR-------SPCMQDRS--HMPYTDAVVHE 335
Query: 191 TLR---LYPAVPVDAKMC---FSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEF 244
R L P A C F + +P G ++ ++ + +F + E F
Sbjct: 336 VQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTI----LISLTSVLHDNKEF---PNPEMF 388
Query: 245 KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR 298
P +LDE G F+K F F AG RIC+G+ A ++ ++ +L F +
Sbjct: 389 DPHHFLDEGGNFKKSK--YFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 440
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 183
AG +TT+ TL + + +L KHP V ++ +E++ G + C+ + + +M Y
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHR-------SPCMQDRS--RMPY 326
Query: 184 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG-DMVCYQAYAMGRMKFIWGDDAE 242
A I E R +P + + D + + KG D++ + K + +
Sbjct: 327 TDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAF--PNPK 384
Query: 243 EFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR 298
F P +LDE+G F+K F F AG R+C+G+ A ++ ++ +L FK +
Sbjct: 385 VFDPGHFLDESGNFKKSD--YFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ 438
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 45 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 103
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 104 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 163
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 164 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 223
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 224 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFT--AFQAGPRICLGKEFAY 281
R+ + D +F P R+ Q++ ++T F AG C+G FA
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARYEQPR---QEDLLNRWTWIPFGAGRHRCVGAAFAI 401
Query: 282 RQMKIYSAVLLSCFKFRLRNVSET 305
Q+K +VLL ++F + E+
Sbjct: 402 MQIKAIFSVLLREYEFEMAQPPES 425
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 113/269 (42%), Gaps = 24/269 (8%)
Query: 45 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 103
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 104 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 163
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 164 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 223
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 224 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFT--AFQAGPRICLGKEFAY 281
R+ + D +F P R+ Q++ ++T F AG C+G FA
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARYEQPR---QEDLLNRWTWIPFGAGRHRCVGAAFAI 401
Query: 282 RQMKIYSAVLLSCFKFRLRNVSETVNYRT 310
Q+K +VLL ++F + E+ YR
Sbjct: 402 MQIKAIFSVLLREYEFEMAQPPES--YRN 428
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 45 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 103
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 104 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 163
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 164 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 223
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 224 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFT--AFQAGPRICLGKEFAY 281
R+ + D +F P R+ Q++ ++T F AG C+G FA
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARYEQPR---QEDLLNRWTWIPFGAGRHRCVGAAFAI 401
Query: 282 RQMKIYSAVLLSCFKFRLRNVSET 305
Q+K +VLL ++F + E+
Sbjct: 402 MQIKAIFSVLLREYEFEMAQPPES 425
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 113/269 (42%), Gaps = 24/269 (8%)
Query: 45 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 103
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 104 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 163
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 164 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 223
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 224 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFT--AFQAGPRICLGKEFAY 281
R+ + D +F P R+ Q++ ++T F AG C+G FA
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARYEQPR---QEDLLNRWTWIPFGAGRHRCVGAAFAI 401
Query: 282 RQMKIYSAVLLSCFKFRLRNVSETVNYRT 310
Q+K +VLL ++F + E+ YR
Sbjct: 402 MQIKAIFSVLLREYEFEMAQPPES--YRN 428
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 52/212 (24%)
Query: 119 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEAL 178
+ ++AG +T A+ L+W +L P Q+++ + + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-------------------- 255
Query: 179 EKMHYLHAAITETLRLYPAV-----PVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 233
AA E LRLYP ++ + +D LP G + + Y R+
Sbjct: 256 -------AAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTT------LVLSPYVTQRL 302
Query: 234 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 293
F D E F+PER+L+E G ++ F G R+CLG++FA + ++L
Sbjct: 303 HF---PDGEAFRPERFLEERGTPSG----RYFPFGLGQRLCLGRDFAL----LEGPIVLR 351
Query: 294 CF--KFRLRNVSETVNYRTMINLHIDGGLHVR 323
F +FRL + + L +GGL R
Sbjct: 352 AFFRRFRLDPLP-FPRVLAQVTLRPEGGLPAR 382
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVK---EATGAKDISDFLKVAG---CISEEA 177
A + T W ++ + ++P + +EVK E G K + + G C+S+
Sbjct: 268 ASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQK-----VSLEGNPICLSQAE 322
Query: 178 LEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL--PDG-FSVRKGDMVCYQAYAMGRMK 234
L + L + I E+LRL A ++ + D TL DG +++RK D++ M
Sbjct: 323 LNDLPVLDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDP 381
Query: 235 FIWGDDAEEFKPERWLDENGIFQK-------ESPFKFTAFQAGPRICLGKEFAYRQMKIY 287
I+ D FK +R+LDENG + + + + F +G IC G+ FA ++K +
Sbjct: 382 EIYPDPLT-FKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 288 SAVLLSCFKFRL 299
++LS F+ L
Sbjct: 441 LILMLSYFELEL 452
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVK---EATGAKDISDFLKVAG---CISEEA 177
A + T W ++ + ++P + +EVK E G K + + G C+S+
Sbjct: 268 ASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQK-----VSLEGNPICLSQAE 322
Query: 178 LEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL--PDG-FSVRKGDMVCYQAYAMGRMK 234
L + L + I E+LRL A ++ + D TL DG +++RK D++ M
Sbjct: 323 LNDLPVLDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDP 381
Query: 235 FIWGDDAEEFKPERWLDENGIFQK-------ESPFKFTAFQAGPRICLGKEFAYRQMKIY 287
I+ D FK +R+LDENG + + + + F +G IC G+ FA ++K +
Sbjct: 382 EIYPDPLT-FKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 288 SAVLLSCFKFRL 299
++LS F+ L
Sbjct: 441 LILMLSYFELEL 452
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 52/212 (24%)
Query: 119 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEAL 178
+ ++AG +T A+ L+W +L P Q+++ + + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-------------------- 255
Query: 179 EKMHYLHAAITETLRLYPAV-----PVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 233
AA E LRLYP ++ + +D LP +G + Y R+
Sbjct: 256 -------AAFQEALRLYPPAWILTRRLERPLLLGEDRLP------QGTTLVLSPYVTQRL 302
Query: 234 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 293
F + E F+PER+L E G ++ F G R+CLG++FA + ++L
Sbjct: 303 YF---PEGEAFQPERFLAERGTPSG----RYFPFGLGQRLCLGRDFAL----LEGPIVLR 351
Query: 294 CF--KFRLRNVSETVNYRTMINLHIDGGLHVR 323
F +FRL + + L +GGL R
Sbjct: 352 AFFRRFRLDPLP-FPRVLAQVTLRPEGGLPAR 382
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 171 GCISEEALEKMHYLHAAITETLRLYPAVPVD---AKMCFSDDTLPDGFSVRKGDMV-CYQ 226
G ++ EA+E+M + + E+LR+ P VP AK F+ ++ F V+KG+M+ YQ
Sbjct: 317 GNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQ 376
Query: 227 AYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP---------RICLGK 277
+A K D EE+ P+R++ + E+ K+ + GP + C GK
Sbjct: 377 PFATKDPKVF--DRPEEYVPDRFVGDG-----EALLKYVWWSNGPETESPTVENKQCAGK 429
Query: 278 EF 279
+F
Sbjct: 430 DF 431
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 41/196 (20%)
Query: 111 PKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVA 170
P+ LRD +L + AG +TT + ++ L P Q +V++ E T A
Sbjct: 229 PEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPD-QLALVRK-GEVTWAD--------- 277
Query: 171 GCISEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 229
+ ETLR PAV + + +D LPDG ++ +G+ + +YA
Sbjct: 278 ----------------VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPIL-ASYA 320
Query: 230 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSA 289
W +DA+ F R + E+ AF G CLG A ++ +
Sbjct: 321 AANRHPDWHEDADTFDATRTVKEH-----------LAFGHGVHFCLGAPLARMEVTLALE 369
Query: 290 VLLSCFK-FRLRNVSE 304
L F RL + +E
Sbjct: 370 SLFGRFPDLRLADPAE 385
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 67 RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDI---ILNFVI 123
R E+ II +K ++++ ++ TS +LS + P L ++ I+ +
Sbjct: 206 RTELQKILSEIIIARKEEEVN--KDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 263
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 183
AG+ T++ T +W + L HPA K ++ ++ K+I +F A +++M +
Sbjct: 264 AGQHTSSITTTWSMLHLM-HPA-NVKHLEALR-----KEIEEF--PAQLNYNNVMDEMPF 314
Query: 184 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 243
E++R P + + + +D + + V KGD++ + D E
Sbjct: 315 AERCARESIRRDPPLLMLMRKVMADVKV-GSYVVPKGDIIACSP-------LLSHHDEEA 366
Query: 244 F-KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR-LRN 301
F +P RW E ++ F F AG C+G++F Q+K A + F+ LR+
Sbjct: 367 FPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 423
Query: 302 VSETVNYRTMI 312
+Y TM+
Sbjct: 424 EVPDPDYHTMV 434
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 67 RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDI---ILNFVI 123
R E+ II +K ++++ ++ TS +LS + P L ++ I+ +
Sbjct: 206 RTELQKILSEIIIARKEEEVN--KDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 263
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 183
AG+ T++ T +W + L HPA K ++ ++ K+I +F A +++M +
Sbjct: 264 AGQHTSSITTTWSMLHLM-HPA-NVKHLEALR-----KEIEEF--PAQLNYNNVMDEMPF 314
Query: 184 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 243
E++R P + + + +D + + V KGD++ + D E
Sbjct: 315 AERCARESIRRDPPLLMLMRKVMADVKV-GSYVVPKGDIIACSP-------LLSHHDEEA 366
Query: 244 F-KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR-LRN 301
F +P RW E ++ F F AG C+G++F Q+K A + F+ LR+
Sbjct: 367 FPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 423
Query: 302 VSETVNYRTMI 312
+Y TM+
Sbjct: 424 EVPDPDYHTMV 434
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 67 RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDI---ILNFVI 123
R E+ II +K ++++ ++ TS +LS + P L ++ I+ +
Sbjct: 205 RTELQKILSEIIIARKEEEVN--KDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 262
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 183
AG+ T++ T +W + L HPA K ++ ++ K+I +F A +++M +
Sbjct: 263 AGQHTSSITTTWSMLHLM-HPA-NVKHLEALR-----KEIEEF--PAQLNYNNVMDEMPF 313
Query: 184 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 243
E++R P + + + +D + + V KGD++ + D E
Sbjct: 314 AERCARESIRRDPPLLMLMRKVMADVKV-GSYVVPKGDIIACSP-------LLSHHDEEA 365
Query: 244 F-KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR-LRN 301
F +P RW E ++ F F AG C+G++F Q+K A + F+ LR+
Sbjct: 366 FPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 422
Query: 302 VSETVNYRTMI 312
+Y TM+
Sbjct: 423 EVPDPDYHTMV 433
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 67 RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDI---ILNFVI 123
R E+ II +K ++++ ++ TS +LS + P L ++ I+ +
Sbjct: 207 RTELQKILSEIIIARKEEEVN--KDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 264
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 183
AG+ T++ T +W + L HPA K ++ ++ K+I +F A +++M +
Sbjct: 265 AGQHTSSITTTWSMLHLM-HPA-NVKHLEALR-----KEIEEF--PAQLNYNNVMDEMPF 315
Query: 184 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 243
E++R P + + + +D + + V KGD++ + D E
Sbjct: 316 AERCARESIRRDPPLLMLMRKVMADVKV-GSYVVPKGDIIACSP-------LLSHHDEEA 367
Query: 244 F-KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR-LRN 301
F +P RW E ++ F F AG C+G++F Q+K A + F+ LR+
Sbjct: 368 FPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 424
Query: 302 VSETVNYRTMI 312
+Y TM+
Sbjct: 425 EVPDPDYHTMV 435
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 84/224 (37%), Gaps = 44/224 (19%)
Query: 64 LKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVI 123
++Q + D +++ I K+ Q D + ++ + E + R V + R + N +
Sbjct: 179 VEQLKQAADDYLWPFIEKRMAQPGD--DLFSRILSEPVGGRPWTVDE---ARRMCRNLLF 233
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 183
G DT AA + L +HP Q + E+
Sbjct: 234 GGLDTVAAMIGMVALHLARHPEDQRLL---------------------------RERPDL 266
Query: 184 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 243
+ AA E +R YP V V D DG ++RKGD+V Y + + + EE
Sbjct: 267 IPAAADELMRRYPTVAVSRNAVADVDA--DGVTIRKGDLV-YLPSVLHNLDPASFEAPEE 323
Query: 244 FKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIY 287
+ +R L +P + T G C+G A ++ ++
Sbjct: 324 VRFDRGL---------APIRHTTMGVGAHRCVGAGLARMEVIVF 358
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 67 RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDI---ILNFVI 123
R E+ II +K ++++ ++ TS +LS + P L ++ I+ +
Sbjct: 219 RTELQKILSEIIIARKEEEVN--KDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 276
Query: 124 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 183
AG+ T++ T +W + L HPA K ++ ++ K+I +F A +++M +
Sbjct: 277 AGQHTSSITTTWSMLHLM-HPA-NVKHLEALR-----KEIEEF--PAQLNYNNVMDEMPF 327
Query: 184 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 243
E++R P + + + +D + + V KGD++ + D E
Sbjct: 328 AERCARESIRRDPPLLMLMRKVMADVKV-GSYVVPKGDIIACSP-------LLSHHDEEA 379
Query: 244 F-KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR-LRN 301
F +P RW E ++ F F AG C+G++F Q+K A + F+ LR+
Sbjct: 380 FPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 436
Query: 302 VSETVNYRTMI 312
+Y TM+
Sbjct: 437 EVPDPDYHTMV 447
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 95/254 (37%), Gaps = 47/254 (18%)
Query: 70 VIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTT 129
+ D V I ++K + D + + +L + LR ++ ++AG +TT
Sbjct: 206 MFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDY-------ELRTLVATVLVAGYETT 258
Query: 130 AATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAIT 189
L+ +Y +HP KI + + A A+
Sbjct: 259 NHQLALAMYDFAQHPDQWMKIKENPELAP---------------------------QAVE 291
Query: 190 ETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERW 249
E LR P +PV A ++D +G + G V A+ R ++ DA+ F
Sbjct: 292 EVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFA-DADRF----- 345
Query: 250 LDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYR 309
+ ++E+P AF GP CLG A ++++ AV + ++ + +R
Sbjct: 346 ---DITVKREAP--SIAFGGGPHFCLGTALA--RLELTEAVAALATRLDPPQIAGEITWR 398
Query: 310 TMINLHIDGGLHVR 323
+ + L +R
Sbjct: 399 HELGVAGPDALPLR 412
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 94/252 (37%), Gaps = 47/252 (18%)
Query: 72 DTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAA 131
D V I ++K + D + + +L + LR ++ ++AG +TT
Sbjct: 198 DYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDY-------ELRTLVATVLVAGYETTNH 250
Query: 132 TLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITET 191
L+ +Y +HP KI + + A A+ E
Sbjct: 251 QLALAMYDFAQHPDQWMKIKENPELAP---------------------------QAVEEV 283
Query: 192 LRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLD 251
LR P +PV A ++D +G + G V A+ R ++ DA+ F
Sbjct: 284 LRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFA-DADRF------- 335
Query: 252 ENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTM 311
+ ++E+P AF GP CLG A ++++ AV + ++ + +R
Sbjct: 336 -DITVKREAP--SIAFGGGPHFCLGTALA--RLELTEAVAALATRLDPPQIAGEITWRHE 390
Query: 312 INLHIDGGLHVR 323
+ + L +R
Sbjct: 391 LGVAGPDALPLR 402
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 100 DILSRFLQVT----DPKYLRDI---ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQ 152
D+LS L P L ++ I+ + AG+ T++ T +W + L HPA K ++
Sbjct: 246 DLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPA-NVKHLE 303
Query: 153 EVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP 212
++ K+I +F A +++M + E++R P + + + +D +
Sbjct: 304 ALR-----KEIEEF--PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV- 355
Query: 213 DGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGP 271
+ V KGD++ + D E F +P RW E ++ F F AG
Sbjct: 356 GSYVVPKGDIIACSP-------LLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGV 405
Query: 272 RICLGKEFAYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 312
C+G++F Q+K A + F+ LR+ +Y TM+
Sbjct: 406 HKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMV 447
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 86/231 (37%), Gaps = 54/231 (23%)
Query: 86 MHDFQEEYTSMKKEDILSRFLQVTD------PKYLRDIILNFVIAGKDTTAATLSWFIYM 139
M D + +D++S +Q D + L D+ + ++AG ++T ++ F+Y+
Sbjct: 210 MGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYL 269
Query: 140 LCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP--- 196
L P ++ ++ L++ + +A+ E R P
Sbjct: 270 LMTRPELRRQL---------------------------LDRPELIPSAVEELTRWVPLGV 302
Query: 197 --AVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENG 254
AVP + D TL G ++R G+ V A R D +F D +
Sbjct: 303 GTAVP---RYAVEDVTL-RGVTIRAGEPVLASTGAANR-------DQAQFP-----DADR 346
Query: 255 IFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSET 305
I +P + F G CLG A ++++ VLL + ET
Sbjct: 347 IDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET 397
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 83/227 (36%), Gaps = 46/227 (20%)
Query: 86 MHDFQEEYTSMKKEDILSRFLQVTD------PKYLRDIILNFVIAGKDTTAATLSWFIYM 139
M D + +D++S +Q D + L D+ + ++AG ++T ++ F+Y+
Sbjct: 210 MGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYL 269
Query: 140 LCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP-AV 198
L P ++ ++ L++ + +A+ E R P V
Sbjct: 270 LMTRPELRRQL---------------------------LDRPELIPSAVEELTRWVPLGV 302
Query: 199 PVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQK 258
A +D G ++R G+ V A R D +F D + I
Sbjct: 303 GTAAPRYAVEDVTLRGVTIRAGEPVLASTGAANR-------DQAQFP-----DADRIDVD 350
Query: 259 ESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSET 305
+P + F G CLG A ++++ VLL + ET
Sbjct: 351 RTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET 397
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 160 AKDISDFLKV-AGCISEEALEKMHYLHAAITETLRLYPAVPVD---AKMCFSDDTLPDGF 215
A++I +K G ++ A+EKM + + E LR P V AK ++ F
Sbjct: 322 AEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAF 381
Query: 216 SVRKGDMV-CYQAYAMGRMKFIWGDDAEEFKPERWLDENG------IFQKESPFKFTAFQ 268
V+ G+M+ YQ A K D A+EF PER++ E G + P T
Sbjct: 382 KVKAGEMLYGYQPLATRDPKIF--DRADEFVPERFVGEEGEKLLRHVLWSNGPETETP-T 438
Query: 269 AGPRICLGKEF 279
G + C GK+F
Sbjct: 439 VGNKQCAGKDF 449
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 160 AKDISDFLKVAGC-ISEEALEKMHYLHAAITETLRLYPAVPVD---AKMCFSDDTLPDGF 215
A++I +K G ++ A+EKM + + E LR P V AK ++ F
Sbjct: 322 AEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAF 381
Query: 216 SVRKGDMV-CYQAYAMGRMKFIWGDDAEEFKPERWLDENG------IFQKESPFKFTAFQ 268
V+ G+M+ YQ A K D A+EF PER++ E G + P T
Sbjct: 382 KVKAGEMLYGYQPLATRDPKIF--DRADEFVPERFVGEEGEKLLRHVLWSNGPETETP-T 438
Query: 269 AGPRICLGKEF 279
G + C GK+F
Sbjct: 439 VGNKQCAGKDF 449
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 117 IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEE 176
+I+ + AG+ T+ T SW + L HP +K + ++ K+I +F A +
Sbjct: 261 MIVAAMFAGQHTSTITTSWSMLHLM-HPK-NKKWLDKLH-----KEIDEF--PAQLNYDN 311
Query: 177 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 236
+++M + + E++R P + + +M ++ + + V KGD++ +
Sbjct: 312 VMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV-GSYVVPKGDIIACSP-------LL 363
Query: 237 WGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 295
D E F P W E ++ F F AG C+G++FA Q+K A +
Sbjct: 364 SHHDEEAFPNPRLWDPER---DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 420
Query: 296 KFR-LRNVSETVNYRTMI 312
F+ LR+ +Y TM+
Sbjct: 421 DFQLLRDEVPDPDYHTMV 438
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 117 IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEE 176
+I+ + AG+ T+ T SW + L HP +K + ++ K+I +F A +
Sbjct: 270 MIVAAMFAGQHTSTITTSWSMLHLM-HPK-NKKWLDKLH-----KEIDEF--PAQLNYDN 320
Query: 177 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 236
+++M + + E++R P + + +M ++ + + V KGD++ +
Sbjct: 321 VMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV-GSYVVPKGDIIACSP-------LL 372
Query: 237 WGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 295
D E F P W E ++ F F AG C+G++FA Q+K A +
Sbjct: 373 SHHDEEAFPNPRLWDPER---DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 429
Query: 296 KFR-LRNVSETVNYRTMI 312
F+ LR+ +Y TM+
Sbjct: 430 DFQLLRDEVPDPDYHTMV 447
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 117 IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEE 176
+I+ + AG+ T+ T SW + L HP +K + ++ K+I +F A +
Sbjct: 255 MIVAAMFAGQHTSTITTSWSMLHLM-HPK-NKKWLDKLH-----KEIDEF--PAQLNYDN 305
Query: 177 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 236
+++M + + E++R P + + +M ++ + + V KGD++ +
Sbjct: 306 VMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV-GSYVVPKGDIIACSP-------LL 357
Query: 237 WGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 295
D E F P W E ++ F F AG C+G++FA Q+K A +
Sbjct: 358 SHHDEEAFPNPRLWDPER---DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 414
Query: 296 KFR-LRNVSETVNYRTMI 312
F+ LR+ +Y TM+
Sbjct: 415 DFQLLRDEVPDPDYHTMV 432
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 84/230 (36%), Gaps = 52/230 (22%)
Query: 86 MHDFQEEYTSMKKEDILSRFLQVTD------PKYLRDIILNFVIAGKDTTAATLSWFIYM 139
M D + +D++S +Q D + L D+ + ++AG ++T ++ F+Y+
Sbjct: 210 MGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYL 269
Query: 140 LCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVP 199
L P ++ ++ L++ + +A+ E R VP
Sbjct: 270 LMTRPELRRQL---------------------------LDRPELIPSAVEELTRW---VP 299
Query: 200 VDAKMCFS----DDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGI 255
+ F +D G ++R G+ V A R D +F D + I
Sbjct: 300 LGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANR-------DQAQFP-----DADRI 347
Query: 256 FQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSET 305
+P + F G CLG A ++++ VLL + ET
Sbjct: 348 DVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET 397
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 30/202 (14%)
Query: 117 IILNFVIAGKDTTAATLSWFIYMLC-----KHPAVQEKIVQEVKEATGAKDISDFLKVAG 171
+I+ + AG+ T+ T +W + L +H A K+ QE+ E + +
Sbjct: 256 MIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLA---KLHQEIDEFPAQLNYDN------ 306
Query: 172 CISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMG 231
+E+M + E++R P + + + V+ G V + +
Sbjct: 307 -----VMEEMPFAEQCARESIRRDPPLVMLMRKVLK--------PVQVGKYVVPEGDIIA 353
Query: 232 RMKFIWGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAV 290
+ D E F P W E + K F F AG C+G++F Q+K A
Sbjct: 354 CSPLLSHQDEEAFPNPREWNPERNM--KLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLAT 411
Query: 291 LLSCFKFRLRNVSETVNYRTMI 312
+L + F L NY TM+
Sbjct: 412 VLRDYDFELLGPLPEPNYHTMV 433
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 44/191 (23%)
Query: 117 IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEE 176
+ILN ++A + TL+ IY L +P + ++D L +
Sbjct: 262 LILNVLLAATEPADKTLALMIYHLLNNP----------------EQMNDVLADRSLVPR- 304
Query: 177 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 236
AI ETLR P V + + S DT+ G ++K +V A R
Sbjct: 305 ----------AIAETLRYKPPVQLIPRQ-LSQDTVVGGMEIKKDTIVFCMIGAANR---- 349
Query: 237 WGDDAEEF-KPERWLDENGIFQKESPF----KFTAFQAGPRICLGKEFAYRQMKIYSAVL 291
D E F +P+ + +S F + AF +G C+G FA +++I + ++
Sbjct: 350 ---DPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIV 406
Query: 292 LSCFKFRLRNV 302
L ++RN+
Sbjct: 407 LD----KMRNI 413
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 43/155 (27%)
Query: 127 DTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHA 186
DT LS+F+ L +HP ++V E++ SD LK L
Sbjct: 293 DTVVNFLSFFMIHLARHP----ELVAELR--------SDPLK---------------LMR 325
Query: 187 AITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKP 246
E R +P V +A+M D G +++GDM+ G DDA P
Sbjct: 326 GAEEMFRRFPVV-SEARMVAKDQEY-KGVFLKRGDMILLPTALHGL------DDAA--NP 375
Query: 247 ERW-LDENGIFQKESPFKFTAFQAGPRICLGKEFA 280
E W LD F + S + F GP C G A
Sbjct: 376 EPWKLD----FSRRS-ISHSTFGGGPHRCAGMHLA 405
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 43/155 (27%)
Query: 127 DTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHA 186
DT LS+F+ L +HP ++V E++ SD LK L
Sbjct: 258 DTVVNFLSFFMIHLARHP----ELVAELR--------SDPLK---------------LMR 290
Query: 187 AITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKP 246
E R +P V +A+M D G +++GDM+ G DDA P
Sbjct: 291 GAEEMFRRFPVV-SEARMVAKDQEY-KGVFLKRGDMILLPTALHGL------DDAA--NP 340
Query: 247 ERW-LDENGIFQKESPFKFTAFQAGPRICLGKEFA 280
E W LD F + S + F GP C G A
Sbjct: 341 EPWKLD----FSRRS-ISHSTFGGGPHRCAGMHLA 370
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 83/219 (37%), Gaps = 46/219 (21%)
Query: 84 DQMHDFQEEYTSMKKEDILSRFLQV------TDPKYLRDIILNFVIAGKDTTAATLSWFI 137
D + F + S K+D++S D KY+ + AG DTT+++ I
Sbjct: 221 DYFNGFTVDRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAI 280
Query: 138 YMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPA 197
L ++P ++A S+ AL + + E +R
Sbjct: 281 IGLSRNPE----------------------QLALAKSDPAL-----IPRLVDEAVRWTAP 313
Query: 198 VPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQ 257
V + +D + G ++++GD + + R + ++ + +EF R+
Sbjct: 314 VKSFMRTALADTEV-RGQNIKRGDRIMLSYPSANRDEEVFSN-PDEFDITRF-------- 363
Query: 258 KESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFK 296
P + F G +CLG+ A +MKI+ LL K
Sbjct: 364 ---PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLK 399
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 13/109 (11%)
Query: 188 ITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPE 247
+ ETLR Y + ++D+ + ++KGD V + R E
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANR-------------DE 268
Query: 248 RWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFK 296
+ DE +F+ AF G +CLG A + I +L+ FK
Sbjct: 269 TFFDEPDLFKIGRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|2A1N|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
pdb|2A1N|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
Length = 415
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 285 KI 286
+
Sbjct: 368 IV 369
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 285 KI 286
+
Sbjct: 368 IV 369
>pdb|2A1O|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
pdb|2A1O|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
Length = 415
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAASEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 285 KI 286
+
Sbjct: 368 IV 369
>pdb|1J51|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|C Chain C, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|D Chain D, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1MPW|A Chain A, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|1MPW|B Chain B, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|2FRZ|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
pdb|2FRZ|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
Length = 414
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 285 KI 286
+
Sbjct: 368 IV 369
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 253 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 310
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 311 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 358
Query: 285 KI 286
+
Sbjct: 359 IV 360
>pdb|2QBN|A Chain A, Crystal Structure Of Ferric G248v Cytochrome P450cam
pdb|2QBO|A Chain A, Crystal Structure Of The P450cam G248v Mutant In The
Cyanide Bound State
Length = 421
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|1GEB|A Chain A, X-Ray Crystal Structure And Catalytic Properties Of
Thr252ile Mutant Of Cytochrome P450cam
Length = 415
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|6CP4|A Chain A, P450cam D251n Mutant
Length = 414
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 285 KI 286
+
Sbjct: 368 IV 369
>pdb|2QBL|A Chain A, Crystal Structure Of Ferric G248t Cytochrome P450cam
pdb|2QBM|A Chain A, Crystal Structure Of The P450cam G248t Mutant In The
Cyanide Bound State
Length = 421
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 285 KI 286
+
Sbjct: 368 IV 369
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|1IWJ|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(109k) Cytochrome P450cam
Length = 415
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 285 KI 286
+
Sbjct: 369 IV 370
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 285 KI 286
+
Sbjct: 368 IV 369
>pdb|2CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
Length = 414
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 285 KI 286
+
Sbjct: 368 IV 369
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 285 KI 286
+
Sbjct: 368 IV 369
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 253 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 310
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 311 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 358
Query: 285 KI 286
+
Sbjct: 359 IV 360
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 165 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 224
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 253 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 310
Query: 225 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 284
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 311 LP-------QMLSGLDERENACPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 358
Query: 285 KI 286
+
Sbjct: 359 IV 360
>pdb|3U1N|A Chain A, Structure Of The Catalytic Core Of Human Samhd1
pdb|3U1N|B Chain B, Structure Of The Catalytic Core Of Human Samhd1
pdb|3U1N|C Chain C, Structure Of The Catalytic Core Of Human Samhd1
pdb|3U1N|D Chain D, Structure Of The Catalytic Core Of Human Samhd1
Length = 528
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 20 VCGSNEEGTRFSSAFDDASAMTLWR---YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVY 76
+ G+ + R S+A DD A T +++I + L E LKQ IE + F Y
Sbjct: 301 ITGAGGKKYRISTAIDDXEAYTKLTDNIFLEILYSTDPKLKDAREI-LKQ-IEYRNLFKY 358
Query: 77 KIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIIL 119
+ T Q+ +E+Y S+ KE + PK L D+ L
Sbjct: 359 VGETQPTGQIKIKREDYESLPKE------VASAKPKVLLDVKL 395
>pdb|3QQY|A Chain A, Crystal Structure Of A Novel Laglidadg Homing
Endonuclease, I-Onui (From Ophiostoma Novo-Ulmi Subsp.
Americana)
Length = 307
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 112 KYLRDIILNFVIAG--KDTTAATLSWFIYMLCKHPAVQEKIVQEVKEAT--GAK--DISD 165
K L + ++ ++ G K+ + SW +++ K + +KI+ +E T G K D D
Sbjct: 213 KNLMNSLITYLGCGYIKEKNKSEFSWLDFVVTKFSDINDKIIPVFQENTLIGVKLEDFED 272
Query: 166 FLKVAGCISEEALEKMHYLHAAITETLRL 194
+ KVA I EK H + + E ++
Sbjct: 273 WCKVAKLIE----EKKHLTESGLDEIKKI 297
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,358,028
Number of Sequences: 62578
Number of extensions: 381712
Number of successful extensions: 1367
Number of sequences better than 100.0: 149
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1112
Number of HSP's gapped (non-prelim): 176
length of query: 327
length of database: 14,973,337
effective HSP length: 99
effective length of query: 228
effective length of database: 8,778,115
effective search space: 2001410220
effective search space used: 2001410220
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)