Query 020379
Match_columns 327
No_of_seqs 276 out of 1338
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 15:59:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020379.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020379hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tx4_A P50-rhogap; complex (GT 100.0 1.4E-42 4.8E-47 307.0 17.2 182 126-307 2-193 (198)
2 3byi_A RHO GTPase activating p 100.0 2.2E-41 7.7E-46 302.8 20.5 182 125-308 12-207 (214)
3 1ow3_A RHO-GTPase-activating p 100.0 1.2E-41 4.1E-46 310.0 18.0 188 125-312 37-234 (242)
4 2osa_A N-chimaerin; RHO-GAP, G 100.0 4.4E-41 1.5E-45 298.3 17.7 165 129-295 5-178 (202)
5 2ee4_A RHO GTPase activating p 100.0 2.5E-41 8.4E-46 301.5 15.2 185 125-312 5-202 (209)
6 3msx_B RHO GTPase-activating p 100.0 6.2E-41 2.1E-45 297.1 17.0 162 127-293 7-174 (201)
7 1pbw_A Rhogap domain, phosphat 100.0 1.9E-41 6.4E-46 303.7 13.2 186 130-316 5-202 (216)
8 3kuq_A RHO GTPase-activating p 100.0 8.7E-41 3E-45 301.8 17.1 167 125-293 13-185 (228)
9 3iug_A RHO/CDC42/RAC GTPase-ac 100.0 1.5E-40 5.1E-45 300.4 17.3 185 125-312 14-219 (229)
10 3fk2_A Glucocorticoid receptor 100.0 2.5E-40 8.5E-45 302.0 16.0 182 125-309 46-240 (246)
11 1f7c_A Rhogap protein; GTPase 100.0 3.2E-39 1.1E-43 292.1 13.6 184 129-312 15-216 (231)
12 2ovj_A Mgcracgap, RAC GTPase-a 100.0 2.4E-38 8.2E-43 280.6 16.3 156 135-293 4-166 (201)
13 3cxl_A N-chimerin; SH2, RHO-GA 100.0 7E-39 2.4E-43 317.1 13.5 194 98-294 236-438 (463)
14 2xs6_A Phosphatidylinositol 3- 100.0 3.3E-39 1.1E-43 288.5 6.8 155 129-292 19-176 (214)
15 3eap_A RHO GTPase-activating p 100.0 1E-37 3.6E-42 288.4 14.4 184 126-312 58-257 (271)
16 3qis_A Inositol polyphosphate 100.0 1.5E-36 5.3E-41 291.7 16.1 166 126-293 138-340 (366)
17 3pg7_A Neurofibromin; SEC lipi 98.6 8.9E-09 3E-13 93.8 1.6 98 6-112 52-156 (256)
18 3peg_A Neurofibromin; SEC14 do 97.7 7.9E-06 2.7E-10 75.5 1.0 89 6-104 71-167 (290)
19 1r5l_A Alpha-TTP, protein (alp 79.6 0.36 1.2E-05 42.7 -0.1 46 31-86 164-210 (262)
20 3hx3_A Retinaldehyde-binding p 73.7 0.78 2.7E-05 42.2 0.4 49 27-85 219-268 (316)
21 1aua_A Phosphatidylinositol tr 72.2 1.2 4.2E-05 40.1 1.4 53 34-96 198-253 (296)
22 1olm_A SEC14-like protein 2; l 62.1 2.3 7.7E-05 40.2 1.0 59 28-96 172-233 (403)
23 3q8g_A CRAL-TRIO domain-contai 54.7 2.5 8.4E-05 38.9 -0.1 53 34-96 213-268 (320)
24 4h5l_A Nucleoprotein; nucleoca 37.9 66 0.0022 28.4 6.3 101 176-284 18-118 (253)
25 2o3f_A Putative HTH-type trans 27.0 75 0.0025 24.0 4.4 42 236-283 9-50 (111)
26 3iwf_A Transcription regulator 25.7 81 0.0028 23.7 4.3 42 236-283 5-46 (107)
27 3kat_A Nacht, LRR and PYD doma 25.4 93 0.0032 23.6 4.6 46 218-263 45-90 (107)
28 3a8p_A T-lymphoma invasion and 25.3 5.8 0.0002 35.4 -2.8 38 147-184 209-246 (263)
No 1
>1tx4_A P50-rhogap; complex (GTPase activation/proto-oncogene), GTPase, transition state, GAP; HET: GDP; 1.65A {Homo sapiens} SCOP: a.116.1.1 PDB: 1am4_A* 1grn_B*
Probab=100.00 E-value=1.4e-42 Score=307.05 Aligned_cols=182 Identities=24% Similarity=0.416 Sum_probs=160.3
Q ss_pred CCCCCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCCCCChhhh
Q 020379 126 GVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDV 205 (327)
Q Consensus 126 ~~~~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~~d~~~v 205 (327)
+..+.++||++|++++++++....||.+|.+|+++|+++|+++|||||++|+..++++|++.+|+|...++....|+|++
T Consensus 2 ~~~~~~vFG~~L~~~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~d~~~~ 81 (198)
T 1tx4_A 2 PPLPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNALHLP 81 (198)
T ss_dssp -CCTTCCTTSCHHHHHHHSTTCCSSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCGGGSSCTHHH
T ss_pred CCCCCCccCCcHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCCCCCeeecCCcHHHHHHHHHHHhCCCCCCccccccchHH
Confidence 34577899999999998865445899999999999999999999999999999999999999999987776444689999
Q ss_pred HHHHHHHHhhCCCCCCChhhHHHHhhH-----HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhhHH
Q 020379 206 AALAKYYLASLPEPLTTFELYDEIKGA-----RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLAM 280 (327)
Q Consensus 206 a~lLK~fLr~LPePLl~~~ly~~~~~~-----~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLAi 280 (327)
|++||.|||+||+||+|.++|+.|+++ .++++.++.++.+||+.|+.+|.||+.||++|+++++.||||++|||+
T Consensus 82 a~lLK~flreLpePLi~~~l~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~ 161 (198)
T 1tx4_A 82 AVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAV 161 (198)
T ss_dssp HHHHHHHHHHSSSCTTCGGGHHHHHTGGGSCGGGHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHH
T ss_pred HHHHHHHHHHCCCcCCCHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHh
Confidence 999999999999999999999999876 357899999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCCCCCHH-----HHHHHHHHHHhc
Q 020379 281 EMAPVIMWQKERKPE-----FYRQYWNHASRS 307 (327)
Q Consensus 281 vf~P~Ll~~~~~~~~-----~~~~~~~~~~~~ 307 (327)
||||+|+|+++.... ..+..++.++.+
T Consensus 162 vf~P~Ll~~~~~~~~~~~~~~~~~~v~~LI~~ 193 (198)
T 1tx4_A 162 VFGPNLLWAKDAAITLKAINPINTFTKFLLDH 193 (198)
T ss_dssp HHHHHHCCCSSHHHHHHTHHHHHHHHHHHHHT
T ss_pred hhcccccCCCCccccHHHHHHHHHHHHHHHHh
Confidence 999999999864321 233445555554
No 2
>3byi_A RHO GTPase activating protein 15; BM046, arhgap15, structural genomics consortium, signaling protein; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=302.79 Aligned_cols=182 Identities=21% Similarity=0.375 Sum_probs=161.9
Q ss_pred cCCCCCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCC--CCCh
Q 020379 125 KGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPE--GVNP 202 (327)
Q Consensus 125 ~~~~~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~--~~d~ 202 (327)
+|..+.++||++|+++++++ +..||.+|.+|+++|+++|+++|||||++|+...+++|++.+|+|...++.. ..|+
T Consensus 12 ~~~~~~~vFG~~L~~~~~~~--~~~vP~~v~~~i~~l~~~gl~~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~dv 89 (214)
T 3byi_A 12 KGLIKDQIFGSHLHKVCERE--NSTVPWFVKQCIEAVEKRGLDVDGIYRVSGNLATIQKLRFIVNQEEKLNLDDSQWEDI 89 (214)
T ss_dssp HTSCCCCSTTSCHHHHHHHH--TCSSCHHHHHHHHHHHHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCCCCTTSGGGCSH
T ss_pred cCCCcCCccCCcHHHHHHHc--CCCCChHHHHHHHHHHHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCCCcccccch
Confidence 67778999999999999876 4689999999999999999999999999999999999999999998766543 2599
Q ss_pred hhhHHHHHHHHhhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChh
Q 020379 203 FDVAALAKYYLASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDAR 276 (327)
Q Consensus 203 ~~va~lLK~fLr~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~ 276 (327)
|++|++||.|||+||+||+|.++|+.|+++ .++++.++.++..||++|+.+|.||+.||++|+++++.||||++
T Consensus 90 h~va~lLK~flreLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~s~~NkM~~~ 169 (214)
T 3byi_A 90 HVVTGALKMFFRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVAKASKNLMSTQ 169 (214)
T ss_dssp HHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHTSSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHH
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcccCCCCCHH
Confidence 999999999999999999999999999876 35788999999999999999999999999999999999999999
Q ss_pred hhHHHhhhcccCCCCCCHHH------HHHHHHHHHhcc
Q 020379 277 SLAMEMAPVIMWQKERKPEF------YRQYWNHASRSS 308 (327)
Q Consensus 277 nLAivf~P~Ll~~~~~~~~~------~~~~~~~~~~~~ 308 (327)
|||+||||+|+|++..+... ....++.++.+.
T Consensus 170 NLa~vf~P~Ll~~~~~~~~~~~~~~~~~~vve~LI~~~ 207 (214)
T 3byi_A 170 SLGIVFGPTLLRAENETGNMAIHMVYQNQIAELMLSEY 207 (214)
T ss_dssp HHHHHHHHHHHCCTTSSSCHHHHHHHHHHHHHHHHHTH
T ss_pred HhHHHhccccCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998776321 223455555544
No 3
>1ow3_A RHO-GTPase-activating protein 1; complex, GTPase, GAP, transition state, gene regulation/signaling protein complex; HET: GDP; 1.80A {Homo sapiens} SCOP: a.116.1.1 PDB: 1rgp_A 2ngr_B*
Probab=100.00 E-value=1.2e-41 Score=310.01 Aligned_cols=188 Identities=23% Similarity=0.412 Sum_probs=165.0
Q ss_pred cCCCCCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCCCCChhh
Q 020379 125 KGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFD 204 (327)
Q Consensus 125 ~~~~~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~~d~~~ 204 (327)
.+..+.++||++|++++.+++....||.+|.+|+++|+++|+++|||||++|+.+.+++|++.+|+|...++....|+|+
T Consensus 37 ~~~~~~~vFG~~L~~~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~dv~~ 116 (242)
T 1ow3_A 37 RPPLPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHL 116 (242)
T ss_dssp --CCTTCCSSSCHHHHHHHSTTCCSSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCGGGSSCTHH
T ss_pred CCCCCCCccCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHcCCCCCceeeeCCcHHHHHHHHHHHhcCCCCCcccccchHH
Confidence 35567889999999999887555699999999999999999999999999999999999999999998777644469999
Q ss_pred hHHHHHHHHhhCCCCCCChhhHHHHhhH-----HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhhH
Q 020379 205 VAALAKYYLASLPEPLTTFELYDEIKGA-----RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLA 279 (327)
Q Consensus 205 va~lLK~fLr~LPePLl~~~ly~~~~~~-----~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA 279 (327)
+|++||.|||+||+||+|+++|+.|+++ .++++.++.++.+||+.|+.+|.||+.||++|+++++.||||++|||
T Consensus 117 va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA 196 (242)
T 1ow3_A 117 PAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLA 196 (242)
T ss_dssp HHHHHHHHHHHSSSCTTCGGGHHHHHTGGGSCGGGHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCcCCCCHHHhH
Confidence 9999999999999999999999999876 35789999999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCCCCCH-----HHHHHHHHHHHhcccccC
Q 020379 280 MEMAPVIMWQKERKP-----EFYRQYWNHASRSSSKNM 312 (327)
Q Consensus 280 ivf~P~Ll~~~~~~~-----~~~~~~~~~~~~~~~~~~ 312 (327)
+||||+|+|+++... ...+..++.++.+...+.
T Consensus 197 ivf~P~Ll~~~~~~~~~~~~~~~~~~v~~LI~~~~~iF 234 (242)
T 1ow3_A 197 VVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELF 234 (242)
T ss_dssp HHHHHHHCCCSSHHHHHHTHHHHHHHHHHHHHTHHHHC
T ss_pred HhhcchhCCCCCccccHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999986432 123455666776665544
No 4
>2osa_A N-chimaerin; RHO-GAP, GTPase activation, structural genomics, structural genomics consortium, SGC, signaling protein; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=298.31 Aligned_cols=165 Identities=23% Similarity=0.371 Sum_probs=149.8
Q ss_pred CCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCC-CCCCC--CCCChhhh
Q 020379 129 STDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDP-NASLP--EGVNPFDV 205 (327)
Q Consensus 129 ~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~-~~~~~--~~~d~~~v 205 (327)
..++||++|+++++++ +..||.+|.+|+++|+++|+++|||||++|+.+++++|++.+|+++ ..++. ...|+|++
T Consensus 5 ~~~vFG~~L~~~~~~~--~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~d~~~~~~~d~~~v 82 (202)
T 2osa_A 5 VKKVYSCDLTTLVKAH--TTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINII 82 (202)
T ss_dssp --CCTTSCHHHHHHHH--TCSSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHHHHGGGCCCSTTTCCCHHHH
T ss_pred CCCccCCChHHHHHHc--CCCCCcHHHHHHHHHHHhCCCcCCeeeecCcHHHHHHHHHHHHcCCCccCCCccccccHHHH
Confidence 4579999999999876 4589999999999999999999999999999999999999999853 34443 23699999
Q ss_pred HHHHHHHHhhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhhH
Q 020379 206 AALAKYYLASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLA 279 (327)
Q Consensus 206 a~lLK~fLr~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA 279 (327)
|++||.|||+||+||+|.++|+.|+++ .++++.++.++..||++|+.+|.||+.||++|+++++.||||+.|||
T Consensus 83 a~lLK~flreLpePLl~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~NLa 162 (202)
T 2osa_A 83 TGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLG 162 (202)
T ss_dssp HHHHHHHHHTCSSCSSCTTTHHHHHHHHHCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCccCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhccccCCCCCHHHHH
Confidence 999999999999999999999999876 35788999999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCCCCCHH
Q 020379 280 MEMAPVIMWQKERKPE 295 (327)
Q Consensus 280 ivf~P~Ll~~~~~~~~ 295 (327)
+||||+|+|+++.+..
T Consensus 163 ~vf~P~Ll~~~~~~~~ 178 (202)
T 2osa_A 163 IVFGPTLMRSPELDAM 178 (202)
T ss_dssp HHHHHHHCCCCCCCHH
T ss_pred HHHccccCCCCCccHH
Confidence 9999999999988764
No 5
>2ee4_A RHO GTPase activating protein 5 variant; all alpha protein, GTPase-activating protein for RHO family members, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2ee5_A
Probab=100.00 E-value=2.5e-41 Score=301.46 Aligned_cols=185 Identities=27% Similarity=0.434 Sum_probs=164.0
Q ss_pred cCCCCCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCC-CCChh
Q 020379 125 KGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPE-GVNPF 203 (327)
Q Consensus 125 ~~~~~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~-~~d~~ 203 (327)
++....++||++|++++.+ +..||.+|.+|+++|+++|+++|||||++|+..++++|++.+|++...++.. +.|+|
T Consensus 5 ~~~~~~~~FG~~L~~~~~~---~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~d~~ 81 (209)
T 2ee4_A 5 SSGWESNYFGMPLQDLVTA---EKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVN 81 (209)
T ss_dssp SSSSCCSSSSSCHHHHSCS---SCCSCHHHHHHHHHHHHTCSCCTTTTTSCCCHHHHHHHHHHHHHCTTCCHHHHTCCHH
T ss_pred CCCCCCCeeCCcHHHHHhc---CCCCChHHHHHHHHHHHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCcccCCCCHH
Confidence 4556788999999999875 3589999999999999999999999999999999999999999988765422 47999
Q ss_pred hhHHHHHHHHhhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhh
Q 020379 204 DVAALAKYYLASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARS 277 (327)
Q Consensus 204 ~va~lLK~fLr~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~n 277 (327)
++|++||.|||+||+||+|.++|+.|+++ .++++.++.++.+||+.|+.+|.||+.||++|+++++.||||+.|
T Consensus 82 ~va~lLK~flreLPePLi~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~N 161 (209)
T 2ee4_A 82 AVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADN 161 (209)
T ss_dssp HHHHHHHHHHHHSSSCSSCTTTHHHHHHHHSCSSHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHHHHTHHHHCCCHHH
T ss_pred HHHHHHHHHHHhCCCccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcccccCCCHHH
Confidence 99999999999999999999999999876 357889999999999999999999999999999999999999999
Q ss_pred hHHHhhhcccCCCCCCHH------HHHHHHHHHHhcccccC
Q 020379 278 LAMEMAPVIMWQKERKPE------FYRQYWNHASRSSSKNM 312 (327)
Q Consensus 278 LAivf~P~Ll~~~~~~~~------~~~~~~~~~~~~~~~~~ 312 (327)
||+||||+|+|++..+.. .....++.++.+...+.
T Consensus 162 Laivf~P~L~~~~~~~~~~l~~~~~~~~vve~LI~~~~~iF 202 (209)
T 2ee4_A 162 LSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFF 202 (209)
T ss_dssp HHHHHHHHHSCCCCCSSCCSCCCTTHHHHHHHHHHTHHHHT
T ss_pred HHHHhcccccCCCCccHHHHHHhHHHHHHHHHHHHhhHHHc
Confidence 999999999998866432 24567888888766554
No 6
>3msx_B RHO GTPase-activating protein 20; protein-proten complex, transition state, protein BI; HET: GDP; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=297.06 Aligned_cols=162 Identities=22% Similarity=0.385 Sum_probs=149.7
Q ss_pred CCCCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCCCCChhhhH
Q 020379 127 VASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVA 206 (327)
Q Consensus 127 ~~~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~~d~~~va 206 (327)
..++++||++|+++++++ .||.+|.+|+++|+++|+++|||||++|+...++++++.+|+|...++ +..|+|++|
T Consensus 7 ~~~~~vFG~~L~~~~~~~----~vP~~v~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~-~~~d~~~va 81 (201)
T 3msx_B 7 PMPGQLFGISLPNICEND----NLPKPVLDMLFFLNQKGPLTKGIFRQSANVKSCRELKEKLNSGVEVHL-DCESIFVIA 81 (201)
T ss_dssp ---CCCTTSCHHHHSGGG----CCCHHHHHHHHHHHHHGGGSTTTTTSCCCHHHHHHHHHHHHHTCCCCT-TSSCHHHHH
T ss_pred CCCCCeeCCcHHHHhcCC----CCCHHHHHHHHHHHHhCCCCCCeeeeCCCHHHHHHHHHHhccCCCCCC-CcccHHHHH
Confidence 346789999999999753 699999999999999999999999999999999999999999987765 457999999
Q ss_pred HHHHHHHhhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhhHH
Q 020379 207 ALAKYYLASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLAM 280 (327)
Q Consensus 207 ~lLK~fLr~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLAi 280 (327)
++||.|||+||+||+|.++|+.|+++ .++++.++.++.+||+.|+.+|.||+.||++|+++++.||||++|||+
T Consensus 82 ~lLK~flreLp~pLl~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~ 161 (201)
T 3msx_B 82 SVLKDFLRNIPGSIFSSDLYDHWVSVMDQGNDEEKINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNLAV 161 (201)
T ss_dssp HHHHHHHHTSTTTTTTGGGHHHHHHGGGSSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHccccHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccccCCCChhhhhh
Confidence 99999999999999999999999876 357889999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCCCCC
Q 020379 281 EMAPVIMWQKERK 293 (327)
Q Consensus 281 vf~P~Ll~~~~~~ 293 (327)
||||+|+|+++..
T Consensus 162 vf~P~ll~~~~~~ 174 (201)
T 3msx_B 162 CVAPSILWPPASS 174 (201)
T ss_dssp HHHHHHCCCCTTS
T ss_pred hhhccccCCCCCC
Confidence 9999999999875
No 7
>1pbw_A Rhogap domain, phosphatidylinositol 3-kinase; phosphotransferase, tpase activating protein, CDC42, phosphoinositide 3-kinase, SH3 domain; 2.00A {Homo sapiens} SCOP: a.116.1.1
Probab=100.00 E-value=1.9e-41 Score=303.74 Aligned_cols=186 Identities=17% Similarity=0.287 Sum_probs=155.3
Q ss_pred CCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCCCCChhhhHHHH
Q 020379 130 TDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVAALA 209 (327)
Q Consensus 130 ~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~~d~~~va~lL 209 (327)
..+||++|++++++...+..||.+|.+|+++|+++|+++|||||++|+..+ ++|++.+|+|......+.+|+|++|++|
T Consensus 5 ~~~fGv~L~~l~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~-~~l~~~~d~~~~~~~~~~~dv~~va~lL 83 (216)
T 1pbw_A 5 VEQQALTLPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNL-AELRQLLDCDTPSVDLEMIDVHVLADAF 83 (216)
T ss_dssp -------CCCHHHHCCTTSCSCHHHHHHHHHHHHHHTTCTTTTSSCCSCCT-THHHHHSCSSSSCCCGGGBCHHHHHHHH
T ss_pred cccCCCcHHHHHhccCCCCCcCHHHHHHHHHHHHcCCCCCCeeeCCChHHH-HHHHHHHHcCCCCCCccccCHHHHHHHH
Confidence 458999999999876667899999999999999999999999999999999 9999999998532223457999999999
Q ss_pred HHHHhhCCCCCCChhhHHHHhhHH-------HHHHHHHHHHh--hcchhhHHHHHHHHHHHHHHHhccccCCCChhhhHH
Q 020379 210 KYYLASLPEPLTTFELYDEIKGAR-------SSIHAMRNTLK--KLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLAM 280 (327)
Q Consensus 210 K~fLr~LPePLl~~~ly~~~~~~~-------~~i~~l~~ll~--~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLAi 280 (327)
|.|||+||+||+|+++|+.|+++. ++++.++.++. +||+.|+.+|.||+.||++|+++++.||||++|||+
T Consensus 84 K~flReLPePLl~~~ly~~~~~~~~~~~~~~~~~~~l~~ll~~~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLAi 163 (216)
T 1pbw_A 84 KRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSE 163 (216)
T ss_dssp HHHHHTSSSCSSCHHHHHHHHHHGGGCCSHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHH
Confidence 999999999999999999998863 47889999999 999999999999999999999999999999999999
Q ss_pred HhhhcccCCCCCCHH---HHHHHHHHHHhcccccCCCCC
Q 020379 281 EMAPVIMWQKERKPE---FYRQYWNHASRSSSKNMEPAT 316 (327)
Q Consensus 281 vf~P~Ll~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 316 (327)
||||+|+|+++.+.. .....++.++.+...+.+..|
T Consensus 164 vf~P~Ll~~~~~~~~~~~~~~~vve~LI~~~~~iF~~~P 202 (216)
T 1pbw_A 164 IFSPMLFRFSAASSDNTENLIKVIEILISTEWNERQPAP 202 (216)
T ss_dssp HHHHHHHTCSSCCHHHHHHHHHHHHHHHHTTC-------
T ss_pred HHhhhcCCCCCCchhhhHHHHHHHHHHHhhhHHhcCCCC
Confidence 999999999988754 235567788888777775543
No 8
>3kuq_A RHO GTPase-activating protein 7; structural genomics consortium, GTPase activation, SGC, alternative splicing, cytoplasm, phosphoprotein; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.7e-41 Score=301.78 Aligned_cols=167 Identities=30% Similarity=0.415 Sum_probs=152.9
Q ss_pred cCCCCCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCCCCChhh
Q 020379 125 KGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFD 204 (327)
Q Consensus 125 ~~~~~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~~d~~~ 204 (327)
.+...+++||++|+++++++ +..||.+|.+|+++|+++|+++|||||++|+...+++|++.+|++......++.|+|+
T Consensus 13 ~~~~~~~vFGv~L~~~~~~~--~~~vP~~v~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~~~~~ 90 (228)
T 3kuq_A 13 NLYFQGSVFGVPLTVNVQRT--GQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYD 90 (228)
T ss_dssp -CBCTTSSTTCCHHHHHHHH--SSSSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHTBSSSCCCCTTCCHHH
T ss_pred CCCCCCCEECCchHHHHHHc--CCCCCHHHHHHHHHHHHhCCCcCCeeecCCCHHHHHHHHHHHhcCCCcCCcccCCHHH
Confidence 45567899999999999886 4689999999999999999999999999999999999999998765544456689999
Q ss_pred hHHHHHHHHhhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhh
Q 020379 205 VAALAKYYLASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSL 278 (327)
Q Consensus 205 va~lLK~fLr~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nL 278 (327)
+|++||.|||+||+||+|.++|+.|+++ .++++.++.++.+||+.|+.+|.||+.||++|+++++.|+||+.||
T Consensus 91 va~lLK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NL 170 (228)
T 3kuq_A 91 VADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNL 170 (228)
T ss_dssp HHHHHHHHHHHSSSCTTCSSHHHHHHHHHHHSCGGGHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhccccCCchhHh
Confidence 9999999999999999999999999876 3578999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCCCCC
Q 020379 279 AMEMAPVIMWQKERK 293 (327)
Q Consensus 279 Aivf~P~Ll~~~~~~ 293 (327)
|+||||+|||++..+
T Consensus 171 Aivf~P~Ll~~~~~~ 185 (228)
T 3kuq_A 171 AVCLAPSLFHLNTLK 185 (228)
T ss_dssp HHHHHHHHHTCCCC-
T ss_pred HHHHhhhhcCCCCCC
Confidence 999999999988764
No 9
>3iug_A RHO/CDC42/RAC GTPase-activating protein RICS; structural genomics consortium (SGC), GAP, alternative splicing, cell junction, cell membrane; 1.77A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=300.40 Aligned_cols=185 Identities=21% Similarity=0.375 Sum_probs=157.5
Q ss_pred cCCCCCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCCC---CC
Q 020379 125 KGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEG---VN 201 (327)
Q Consensus 125 ~~~~~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~---~d 201 (327)
++..+.++||++|+++++++ +..||.+|.+|+++|+++|+ +|||||++|+...+++|++.+|++...++... .|
T Consensus 14 ~~~~~~~vFG~~L~~~~~~~--~~~vP~iv~~~i~~i~~~gl-~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~~d 90 (229)
T 3iug_A 14 LYFQGERVFGCDLGEHLLNS--GFEVPQVLQSCTAFIERYGI-VDGIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQD 90 (229)
T ss_dssp ----CCCSTTSCHHHHHHHH--CCSSCHHHHHHHHHHHHHCC-STTTTTSCCCHHHHHHHHHHHHTTCCCCTTSTTTTTC
T ss_pred CCCCCCCeECcchHHHHHhc--CCCCCHHHHHHHHHHHHcCC-CCCCeecCCcHHHHHHHHHHHhcCCCCCccccccccc
Confidence 34557899999999999876 45899999999999999999 89999999999999999999999886655332 59
Q ss_pred hhhhHHHHHHHHhhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCCh
Q 020379 202 PFDVAALAKYYLASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDA 275 (327)
Q Consensus 202 ~~~va~lLK~fLr~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~ 275 (327)
+|++|++||.|||+||+||+|.++|+.|+++ .+++..++.++.+||+.|+.+|.||+.||++|+++++.||||+
T Consensus 91 vh~va~lLK~fLreLPePLl~~~ly~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~ 170 (229)
T 3iug_A 91 IHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHA 170 (229)
T ss_dssp HHHHHHHHHHHHHHCSSCTTCTTTHHHHHHHHTSSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCH
T ss_pred hHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCCh
Confidence 9999999999999999999999999999876 4578899999999999999999999999999999999999999
Q ss_pred hhhHHHhhhcccCCCCCCHH------------HHHHHHHHHHhcccccC
Q 020379 276 RSLAMEMAPVIMWQKERKPE------------FYRQYWNHASRSSSKNM 312 (327)
Q Consensus 276 ~nLAivf~P~Ll~~~~~~~~------------~~~~~~~~~~~~~~~~~ 312 (327)
.|||+||||+|+|+++.+.. .....++.++.+...+.
T Consensus 171 ~NLAivf~P~Ll~~~~~~~~~~~~~~~~~~~~~~~~vve~LI~~~~~iF 219 (229)
T 3iug_A 171 KNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLF 219 (229)
T ss_dssp HHHHHHHHHHHCCC-------------------CHHHHHHHHHTHHHHT
T ss_pred HHHHHHHhccccCCCcccccccchHHHHHHHHHHHHHHHHHHHhHHHhC
Confidence 99999999999999864311 11346777777766655
No 10
>3fk2_A Glucocorticoid receptor DNA-binding factor 1; structural genomics consortium, GTPase-activating protein, SGC, alternative splicing, anti-oncogene; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=302.04 Aligned_cols=182 Identities=25% Similarity=0.481 Sum_probs=158.6
Q ss_pred cCCCCCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCC-CCChh
Q 020379 125 KGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPE-GVNPF 203 (327)
Q Consensus 125 ~~~~~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~-~~d~~ 203 (327)
+.....++||++|++++.. +..||.+|.+|+++|+++|+++|||||++|+...+++|++.+|+|...++.. ++|+|
T Consensus 46 ~~~~~~~vFGv~L~~~~~~---~~~vP~iv~~~i~~l~~~gl~~eGIFR~sG~~~~v~~L~~~~d~~~~~~~~~~~~dvh 122 (246)
T 3fk2_A 46 KATWESNYFGVPLTTVVTP---EKPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVN 122 (246)
T ss_dssp ---CCCSSTTSCGGGGCCS---SSCSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHHHCTTCCSGGGTCCHH
T ss_pred ccccCCCeeCCCHHHHhcC---CCCCChHHHHHHHHHHHhCCCCCCeeEeCCcHHHHHHHHHHHhcCCCCCcccccCcHH
Confidence 4455779999999999864 4589999999999999999999999999999999999999999998776543 46999
Q ss_pred hhHHHHHHHHhhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhh
Q 020379 204 DVAALAKYYLASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARS 277 (327)
Q Consensus 204 ~va~lLK~fLr~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~n 277 (327)
++|++||.|||+||+||+|+++|+.|+++ .+++..++.++..||+.|+.+|.||+.||++|+++++.|+||+.|
T Consensus 123 ~va~lLK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkMt~~N 202 (246)
T 3fk2_A 123 TVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSEN 202 (246)
T ss_dssp HHHHHHHHHHHHSSSCSSCHHHHHHHHHHTTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHH
T ss_pred HHHHHHHHHHHhCCCccCCHHHHHHHHHHhccCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCchHH
Confidence 99999999999999999999999999886 357889999999999999999999999999999999999999999
Q ss_pred hHHHhhhcccCCCCCCHHH------HHHHHHHHHhccc
Q 020379 278 LAMEMAPVIMWQKERKPEF------YRQYWNHASRSSS 309 (327)
Q Consensus 278 LAivf~P~Ll~~~~~~~~~------~~~~~~~~~~~~~ 309 (327)
||+||||+|+|++..+... .+..++.++.+..
T Consensus 203 LAivf~P~Llrp~~~~~~~~~~~~~~~~ive~LI~~~~ 240 (246)
T 3fk2_A 203 LSICFWPTLMRPDFSTMDALTATRTYQTIIELFIQQCP 240 (246)
T ss_dssp HHHHHHHHHHCCCSSSSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hHHHhcccccCCCCccHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999988665432 2234555555443
No 11
>1f7c_A Rhogap protein; GTPase activating protein, RHO GTPase regulator, BH domain, signaling protein; 2.40A {Gallus gallus} SCOP: a.116.1.1
Probab=100.00 E-value=3.2e-39 Score=292.08 Aligned_cols=184 Identities=18% Similarity=0.252 Sum_probs=140.7
Q ss_pred CCCcccCCHHHHHhhhcC-CCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHH-HHcCCC--CCCCC--CCCCh
Q 020379 129 STDVFGVPIEVTVQRQQY-GKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVS-MYNQDP--NASLP--EGVNP 202 (327)
Q Consensus 129 ~~~vFG~~L~~l~~~~~~-~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~-~~d~~~--~~~~~--~~~d~ 202 (327)
+.++||+||...++++.. +..+|.+|.+|+++|+++|+++|||||++|+..+++++++ .+|.+. .+++. ...|+
T Consensus 15 ~~pvfgvpl~~~~~~~~~l~~~~p~iv~~ci~~le~~gl~~eGIfR~sG~~~~v~~l~~~~~d~~~~~~~~l~~~~~~dv 94 (231)
T 1f7c_A 15 REPVYNSNKDNQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWEI 94 (231)
T ss_dssp ----------------CCSSHHHHHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHCC------CCCCCTTSCH
T ss_pred CCCccCCcchhccccccccCCcCccHHHHHHHHHHHhCCCCCCeeeeCCcHHHHHHHHHHHhCcCCCcccCccccccccH
Confidence 456999999998775432 3468999999999999999999999999999999999987 578764 34432 24799
Q ss_pred hhhHHHHHHHHhhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChh
Q 020379 203 FDVAALAKYYLASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDAR 276 (327)
Q Consensus 203 ~~va~lLK~fLr~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~ 276 (327)
|++|++||.|||+||+||+|+++|+.|+++ .+++..++.++.+||++|+.+|.||+.||++|+++++.||||++
T Consensus 95 h~va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~r~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~ 174 (231)
T 1f7c_A 95 KTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVA 174 (231)
T ss_dssp HHHHHHHHHHHHTSSSCTTCHHHHHHHHHHHTCSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHH
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcCCCCCCCHH
Confidence 999999999999999999999999999876 35788999999999999999999999999999999999999999
Q ss_pred hhHHHhhhcccCCCCCCHH------HHHHHHHHHHhcccccC
Q 020379 277 SLAMEMAPVIMWQKERKPE------FYRQYWNHASRSSSKNM 312 (327)
Q Consensus 277 nLAivf~P~Ll~~~~~~~~------~~~~~~~~~~~~~~~~~ 312 (327)
|||+||||+|+|++..+.. .....++.++.+...+.
T Consensus 175 NLAivf~P~Ll~~~~~~~~~~~~~~~~~~vve~LI~~~~~iF 216 (231)
T 1f7c_A 175 NLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIF 216 (231)
T ss_dssp HHHHHHHHHHSCC---CCSGGGGHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHhccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999875532 22346777777766555
No 12
>2ovj_A Mgcracgap, RAC GTPase-activating protein 1; signaling protein, structural genomics, structural genomics consortium, SGC; HET: 7PE; 1.49A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=280.57 Aligned_cols=156 Identities=27% Similarity=0.367 Sum_probs=140.8
Q ss_pred CCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCCCC-ChhhhHHHHHHHH
Q 020379 135 VPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGV-NPFDVAALAKYYL 213 (327)
Q Consensus 135 ~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~~-d~~~va~lLK~fL 213 (327)
.+|++++.+. +..||.+|.+|+++|+++|+++|||||++|+..++++|++.+|+|......... |+|++|++||.||
T Consensus 4 g~L~~~~~~~--~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~~~~~~~~~~~~~~d~h~va~lLK~fl 81 (201)
T 2ovj_A 4 GMLADFVSQT--SPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICSLLKDFL 81 (201)
T ss_dssp CCGGGGCCSS--SSCCCHHHHHHHHHHHHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCSCCCGGGCCCHHHHHHHHHHHH
T ss_pred CcHHHHhccc--CCCCChHHHHHHHHHHHhCCCcCceeeeCCcHHHHHHHHHHHHcCCCCccccccCCHHHHHHHHHHHH
Confidence 4577776653 679999999999999999999999999999999999999999999765433444 9999999999999
Q ss_pred hhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhhHHHhhhccc
Q 020379 214 ASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLAMEMAPVIM 287 (327)
Q Consensus 214 r~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLAivf~P~Ll 287 (327)
|+||+||+|.++|+.|+++ .++++.++.++.+||++|+.+|.||+.||++|+++ +.||||++|||+||||+|+
T Consensus 82 reLpePLi~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~-~~NkM~~~NLa~vf~P~ll 160 (201)
T 2ovj_A 82 RNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHLQRVAQS-PHTKMDVANLAKVFGPTIV 160 (201)
T ss_dssp HTSSSCTTCTTTHHHHHHHHHCSSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHC-TTSCCCHHHHHHHHHHHHT
T ss_pred HhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHhhhhhc
Confidence 9999999999999999887 34678999999999999999999999999999996 6899999999999999999
Q ss_pred CCCCCC
Q 020379 288 WQKERK 293 (327)
Q Consensus 288 ~~~~~~ 293 (327)
|++..+
T Consensus 161 ~~~~~~ 166 (201)
T 2ovj_A 161 AHAVPN 166 (201)
T ss_dssp CCSSSS
T ss_pred CCCCCC
Confidence 987654
No 13
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=100.00 E-value=7e-39 Score=317.11 Aligned_cols=194 Identities=20% Similarity=0.320 Sum_probs=168.5
Q ss_pred CccchhHHHHHhhhcchhhHhhHHHhhcCCCCCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCC
Q 020379 98 GKIKVEEAAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGD 177 (327)
Q Consensus 98 ~~~~~~e~~~~~~~k~~~~~~~~~~~~~~~~~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~ 177 (327)
++.+|.+|...+|++|.......|.. ......++||++|+++++++ +..||.+|.+|+++|+++|+++|||||++|+
T Consensus 236 qg~~C~~C~~~~Hk~C~~~vp~~C~~-~~~~~~~vFG~~L~~~~~~~--~~~vP~iv~~~i~~le~~gl~~eGIfR~sG~ 312 (463)
T 3cxl_A 236 QGVKCADCGLNVHKQCSKMVPNDCKP-DLKHVKKVYSCDLTTLVKAH--TTKRPMVVDMCIREIESRGLNSEGLYRVSGF 312 (463)
T ss_dssp CEEEETTTCCEECHHHHTTSCSBCCG-GGGGCCCCTTSCHHHHHHHH--TCSSCHHHHHHHHHHHHHCSCSTTTTTSCCC
T ss_pred cCeeccccCccccccccccccccccc-cccccccccccccchhhhcc--CCCCCeeHHHHHHHHHhcCCCCCceeEecCC
Confidence 57899999988888887554332221 12235689999999999876 4689999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCC-CCCCC--CCCChhhhHHHHHHHHhhCCCCCCChhhHHHHhhH------HHHHHHHHHHHhhcch
Q 020379 178 KKVIQHLVSMYNQDP-NASLP--EGVNPFDVAALAKYYLASLPEPLTTFELYDEIKGA------RSSIHAMRNTLKKLSN 248 (327)
Q Consensus 178 ~~~i~~L~~~~d~~~-~~~~~--~~~d~~~va~lLK~fLr~LPePLl~~~ly~~~~~~------~~~i~~l~~ll~~LP~ 248 (327)
.+.+++|++.+|++. ..++. ...|+|++|++||.|||+||+||+|+++|+.|+++ .++++.++.++..||+
T Consensus 313 ~~~i~~L~~~~d~~~~~~~~~~~~~~dv~~va~lLK~flReLPePLi~~~ly~~~~~~~~~~~~~~~~~~l~~ll~~LP~ 392 (463)
T 3cxl_A 313 SDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPP 392 (463)
T ss_dssp HHHHHHHHHHHHHHGGGCCCSTTTCCCHHHHHHHHHHHHHHCSSCSSCTTTHHHHHHHHHCCCHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHhcCCcCCcccccCCCcchhhhHHHHHHHhcCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCH
Confidence 999999999999854 23332 23699999999999999999999999999999886 3578899999999999
Q ss_pred hhHHHHHHHHHHHHHHHhccccCCCChhhhHHHhhhcccCCCCCCH
Q 020379 249 VNFMTLEYVTALLLRVSQKSLLNKMDARSLAMEMAPVIMWQKERKP 294 (327)
Q Consensus 249 ~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLAivf~P~Ll~~~~~~~ 294 (327)
+|+.+|.||+.||++|+++++.|+||+.|||+||||+|+++++.++
T Consensus 393 ~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLAivf~P~Ll~~~~~~~ 438 (463)
T 3cxl_A 393 AHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDA 438 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHCCCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHhhccccCCCCccH
Confidence 9999999999999999999999999999999999999999988654
No 14
>2xs6_A Phosphatidylinositol 3-kinase regulatory subunit; structural genomics consortium, SGC, transferase; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=288.45 Aligned_cols=155 Identities=19% Similarity=0.182 Sum_probs=126.0
Q ss_pred CCCcccCCHHHHHhhhcCCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCCCCChhhhHHH
Q 020379 129 STDVFGVPIEVTVQRQQYGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVAAL 208 (327)
Q Consensus 129 ~~~vFG~~L~~l~~~~~~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~~d~~~va~l 208 (327)
..++||++|++++++...+..||.+|.+|+++|+++|+++|||||++|+. +++ .+...+ .+..|+|++|++
T Consensus 19 ~~~vFGv~L~~l~~~~~~~~~vP~iv~~~i~~l~~~Gl~~eGIfR~sG~~-----lr~---~~~~~d-l~~~dvh~va~l 89 (214)
T 2xs6_A 19 YFQSMGLTLPDLPEQFSPPDVAPPLLVKLVEAIERTGLDSESHYRPELPA-----PRT---DWSLSD-VDQWDTAALADG 89 (214)
T ss_dssp ------CCCCCHHHHCCTTCCSCHHHHHHHHHHHHHCTTCSGGGCCSCCC-----CCC---CCCCTT-GGGCCHHHHHHH
T ss_pred CCcccCcCHHHHHHhhCCCCCCCHHHHHHHHHHHHhCCCCCCCeeeCHHH-----HHh---ccccCC-CccCCHHHHHHH
Confidence 56799999999998644457899999999999999999999999999998 333 122233 345899999999
Q ss_pred HHHHHhhCCCCCCChhhHHHHhhHHH---HHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhhHHHhhhc
Q 020379 209 AKYYLASLPEPLTTFELYDEIKGARS---SIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLAMEMAPV 285 (327)
Q Consensus 209 LK~fLr~LPePLl~~~ly~~~~~~~~---~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLAivf~P~ 285 (327)
||.|||+||+||+|+++|+.|+++.. ..+.+..++.+||+.|+.+|.||+.||++|+++++.|||++.|||+||||+
T Consensus 90 LK~flReLPePLi~~~ly~~~i~~~~~~~~~~~~~~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~ 169 (214)
T 2xs6_A 90 IKSFLLALPAPLVTPEASAEARRALREAAGPVGPALEPPTLPLHRALTLRFLLQHLGRVARRAPALGPAVRALGATFGPL 169 (214)
T ss_dssp HHHHHHHSSSCSSCHHHHHHHHHHHHCC--CCGGGGSTTTSCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHHhhh
Confidence 99999999999999999999998743 111223788999999999999999999999999999999999999999999
Q ss_pred ccCCCCC
Q 020379 286 IMWQKER 292 (327)
Q Consensus 286 Ll~~~~~ 292 (327)
|+|+++.
T Consensus 170 Ll~~~~~ 176 (214)
T 2xs6_A 170 LLRAPPP 176 (214)
T ss_dssp HHC----
T ss_pred hcCCccc
Confidence 9999875
No 15
>3eap_A RHO GTPase-activating protein 11A; GAP, structural genomics consortium, GTPase activation, phosphoprotein, polymorphism hydrolase activator, SGC; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=288.44 Aligned_cols=184 Identities=22% Similarity=0.267 Sum_probs=147.0
Q ss_pred CCCCCCcccCCHHHHHhhhc-CCCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHHHHHHcCCCCCCCCCCCChhh
Q 020379 126 GVASTDVFGVPIEVTVQRQQ-YGKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFD 204 (327)
Q Consensus 126 ~~~~~~vFG~~L~~l~~~~~-~~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~~d~~~ 204 (327)
...++++||++|++++++.. .++.||.+|.+|+.+|++ |+.+|||||++|+...+++|++.+|+|... ....|+|+
T Consensus 58 ~~~~~~vFGv~L~~l~~~~~~~~~~iP~~l~~~~~~le~-gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~--~~~~~~~~ 134 (271)
T 3eap_A 58 TEIGGKIFGVPFNALPHSAVPEYGHIPSFLVDACTSLED-HIHTEGLFRKSGSVIRLKALKNKVDHGEGC--LSSAPPCD 134 (271)
T ss_dssp ---CCSSTTSCGGGSCEEEETTTEEEEHHHHHHHHHHGG-GTTC--------CHHHHHHHHHHHHHC-------CCCHHH
T ss_pred CCCCCCeeCCcHHHHHhhccCCCCCcChHHHHHHHHHHh-CCCCCCeeeeCCCHHHHHHHHHHHHcCCCC--cccccHHH
Confidence 34467899999999886532 245799999999999975 899999999999999999999999998765 34579999
Q ss_pred hHHHHHHHHhhCCCCCCChhhHHHHhhH-----HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhhH
Q 020379 205 VAALAKYYLASLPEPLTTFELYDEIKGA-----RSSIHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLA 279 (327)
Q Consensus 205 va~lLK~fLr~LPePLl~~~ly~~~~~~-----~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA 279 (327)
+|++||.|||+||+||+|+++|+.|+++ .++...++.++..||+.|+.+|.||+.||++|+++++.|+||+.|||
T Consensus 135 va~lLK~fLReLPePLl~~~ly~~~~~~~~~~~~~~~~~~~~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA 214 (271)
T 3eap_A 135 IAGLLKQFFRELPEPILPADLHEALLKAQQLGTEEKNKATLLLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLA 214 (271)
T ss_dssp HHHHHHHHHHHSSSCSSCGGGHHHHHHHTTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHHHHHHhCCcccCCHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHH
Confidence 9999999999999999999999999886 34677788889999999999999999999999999999999999999
Q ss_pred HHhhhcccCCCCCCH---H-------HHHHHHHHHHhcccccC
Q 020379 280 MEMAPVIMWQKERKP---E-------FYRQYWNHASRSSSKNM 312 (327)
Q Consensus 280 ivf~P~Ll~~~~~~~---~-------~~~~~~~~~~~~~~~~~ 312 (327)
+||||+|+|+++... . .....++.++.+...+.
T Consensus 215 ivf~P~Ll~~~~~~~~~~~~~~~~~~~~~~vve~LI~~~~~IF 257 (271)
T 3eap_A 215 VIFAPNLLQTSEGHEKMSSNTEKKLRLQAAVVQTLIDYASDIG 257 (271)
T ss_dssp HHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHHHHHTGGGTT
T ss_pred HHHHhHhccCCCCccchhhhHHHHHHHHHHHHHHHHHhHHHHh
Confidence 999999999987321 1 11346788888776665
No 16
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=100.00 E-value=1.5e-36 Score=291.70 Aligned_cols=166 Identities=19% Similarity=0.303 Sum_probs=150.9
Q ss_pred CCCCCCcccCCHHHHHhhhc-------------------------------------CCCCCCHHHHHHHHHHHHcCCCC
Q 020379 126 GVASTDVFGVPIEVTVQRQQ-------------------------------------YGKPVPHILVKCADYLVLSGLNS 168 (327)
Q Consensus 126 ~~~~~~vFG~~L~~l~~~~~-------------------------------------~~~~VP~il~~~i~~i~~~gl~~ 168 (327)
+...+++||++|++++.... .+..||.+|.+|++||+++|+.+
T Consensus 138 ~~~~~s~FG~sl~~l~~~~~pir~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~iP~~v~~~i~~l~~~Gl~~ 217 (366)
T 3qis_A 138 GNYLPSCFGTSLEALCRMKRPIREVPVTKLIDLEEDSFLEKEKSLLQMVPLDEGASERPLQVPKEIWLLVDHLFKYACHQ 217 (366)
T ss_dssp EEECCCSTTSCHHHHHHCCSCTTC---------------------------------CCCSSCHHHHHHHHHHHHHCTTC
T ss_pred cccCCccccCcHHHHHHhccchhhcChhhhhhccccchhhhcccccccccccccccCCCCCcChHHHHHHHHHHhcCCCC
Confidence 34467899999999986531 12489999999999999999999
Q ss_pred cCeeeccCCHHHHHHHHHHHcCCCCCCCCCCCChhhhHHHHHHHHhhCCCCCCChhhHHHHhhHHHHHHHHHHHHhhcch
Q 020379 169 QFLFKAEGDKKVIQHLVSMYNQDPNASLPEGVNPFDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSN 248 (327)
Q Consensus 169 eGIFR~sg~~~~i~~L~~~~d~~~~~~~~~~~d~~~va~lLK~fLr~LPePLl~~~ly~~~~~~~~~i~~l~~ll~~LP~ 248 (327)
|||||++|+..++++|++.+|.|...++. .|+|++|++||.|||+||+||+|+++|+.|+++....+.++.++..||+
T Consensus 218 eGIFR~~G~~~~v~~L~~~~d~~~~~~~~--~dvh~va~lLK~fLReLPePLi~~~ly~~~~~~~~~~~~~~~ll~~LP~ 295 (366)
T 3qis_A 218 EDLFQTPGMQEELQQIIDCLDTSIPETIP--GSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYDPRICRQVISQLPR 295 (366)
T ss_dssp TTTTTSCCCHHHHHHHHHHHHHCCCSSCC--SCHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHHTTCHHHHHHHHHTSCH
T ss_pred CCeEeCCCCHHHHHHHHHHHcCCCCCccc--cCHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHhhhHHHHHHHHHHCCH
Confidence 99999999999999999999998876543 4999999999999999999999999999999998777889999999999
Q ss_pred hhHHHHHHHHHHHHHHHhccccCCCChhhhHHHhhhcccCCCCCC
Q 020379 249 VNFMTLEYVTALLLRVSQKSLLNKMDARSLAMEMAPVIMWQKERK 293 (327)
Q Consensus 249 ~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLAivf~P~Ll~~~~~~ 293 (327)
.|+.+|.||+.||++|+++++.|+||++|||+||||+|||++..+
T Consensus 296 ~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA~vf~P~Llr~~~~~ 340 (366)
T 3qis_A 296 CHRNVFRYLMAFLRELLKFSEYNSVNANMIATLFTSLLLRPPPNL 340 (366)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHSCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHhhhcccCCCcc
Confidence 999999999999999999999999999999999999999999765
No 17
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*
Probab=98.60 E-value=8.9e-09 Score=93.79 Aligned_cols=98 Identities=11% Similarity=-0.018 Sum_probs=77.9
Q ss_pred CchHHHh------hhccccccchhhhhhhhchhHhhHHHHhhhHHhh-hccchhHHHHHHHhcCcccccchhhhhhHHhh
Q 020379 6 SPPWQEK------ASEFFSSSGSKLREAGQSVGEVAKDAKGNAADVA-ERVGSAVKSRWALLQEPSTKHAVQERLISAAA 78 (327)
Q Consensus 6 ~~~~~~~------~~~~~~~~~~~~~~~~~~y~~~~r~~kkNlk~l~-vhp~~~~Ks~w~~~~~~~~~~~~~~~~iS~kf 78 (327)
++.|.++ .+||=++.--.++|..++|..+||+|+|||+++| +||++|+|..|..+.. .+.+.+|
T Consensus 52 ~~~~~~~y~lV~d~T~~~~~n~p~~~wl~~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~---------~~~~~k~ 122 (256)
T 3pg7_A 52 KPYYAKPYEIVVDLTHTGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHER---------LLTGLKG 122 (256)
T ss_dssp TTTTTSCEEEEEECTTCCGGGCCCHHHHHHTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHH---------HHTTTTT
T ss_pred HHhcCCCeEEEEECCCCCcccCCcHHHHHHHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhc---------ccccccc
Confidence 4556555 3454444555678999999999999999999999 9999999977665541 6777799
Q ss_pred hhccccccccccccchhhcCccchhHHHHHhhhc
Q 020379 79 ITGMFLRRGFSETKDKVAVGKIKVEEAAKKTAQK 112 (327)
Q Consensus 79 ~~k~~~~~~~s~l~~~v~~~~~~~~e~~~~~~~k 112 (327)
.+|+.|++++++|.++++..++.+++........
T Consensus 123 ~~Ki~fv~sl~eL~~~i~~~~L~LP~~t~~~~~d 156 (256)
T 3pg7_A 123 SKRLVFIDCPGKLAEHIEHEQQKLPAATLALEED 156 (256)
T ss_dssp CTTEEEESSTTGGGGTSCGGGCCCCHHHHHTTSS
T ss_pred CCcEEEECCHHHHHhhcCHHHcCCChHHHhhccc
Confidence 9999999999999999999999997665544333
No 18
>3peg_A Neurofibromin; SEC14 domain, pleckstrin homology domain, PH domain, phosphatidylethanolamin binding, lipid binding, lipid bindi protein; HET: PEV; 2.52A {Homo sapiens}
Probab=97.68 E-value=7.9e-06 Score=75.48 Aligned_cols=89 Identities=11% Similarity=-0.045 Sum_probs=60.7
Q ss_pred CchHHHh------hhccccccchhhhhhhhchhHhhHHHHhhhHHhh-hccchhHHHHH-HHhcCcccccchhhhhhHHh
Q 020379 6 SPPWQEK------ASEFFSSSGSKLREAGQSVGEVAKDAKGNAADVA-ERVGSAVKSRW-ALLQEPSTKHAVQERLISAA 77 (327)
Q Consensus 6 ~~~~~~~------~~~~~~~~~~~~~~~~~~y~~~~r~~kkNlk~l~-vhp~~~~Ks~w-~~~~~~~~~~~~~~~~iS~k 77 (327)
+|-|..+ .++|-+..--.+++..+.|..+|++++||++++| +||+++.|..+ ..++ .+.+.+
T Consensus 71 ~~~~~~~y~lV~D~T~~~~~n~p~~~~l~~~~~llp~~~~kNl~~~Yi~np~~~f~~~~k~~~~----------~~~~~k 140 (290)
T 3peg_A 71 KPYYAKPYEIVVDLTHTGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHER----------LLTGLK 140 (290)
T ss_dssp TTTTTSCEEEEEECTTCCGGGCCCHHHHGGGGTSSCHHHHHTEEEEEEESCCHHHHHHHHHTTT----------TGGGGT
T ss_pred HHhcCCCeEEEEEcCCCCccCCChHHHHHHHHHHCCHHHHhhccEEEEECCCHHHHHHHHHHHh----------hhhhhh
Confidence 4566555 3454444555678999999999999999999999 99999999854 4555 788899
Q ss_pred hhhccccccccccccchhhcCccchhH
Q 020379 78 AITGMFLRRGFSETKDKVAVGKIKVEE 104 (327)
Q Consensus 78 f~~k~~~~~~~s~l~~~v~~~~~~~~e 104 (327)
+.+++.|.+...++.+++...++..++
T Consensus 141 ~~~k~v~~~~~~~L~~~i~~~~~~lp~ 167 (290)
T 3peg_A 141 GSKRLVFIDCPGKLAEHIEHEQQKLPA 167 (290)
T ss_dssp TCTTEEEESSSCC--------------
T ss_pred cCceEEEcCCHHHHHhhCCHHHhcCcc
Confidence 999999999998888888877777654
No 19
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=79.64 E-value=0.36 Score=42.71 Aligned_cols=46 Identities=0% Similarity=0.055 Sum_probs=38.5
Q ss_pred hhHhhHHHHhhhHHhh-hccchhHHHHHHHhcCcccccchhhhhhHHhhhhcccccc
Q 020379 31 VGEVAKDAKGNAADVA-ERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRR 86 (327)
Q Consensus 31 y~~~~r~~kkNlk~l~-vhp~~~~Ks~w~~~~~~~~~~~~~~~~iS~kf~~k~~~~~ 86 (327)
...+...|-..|+++| +++.++..++|.+++ ++++++...|+.+..
T Consensus 164 ~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vk----------pfl~~~t~~Ki~~~~ 210 (262)
T 1r5l_A 164 AAVLTDSFPLKVRGIHLINEPVIFHAVFSMIK----------PFLTEKIKERIHMHG 210 (262)
T ss_dssp HHHHHTSSSSCEEEEEEESCCGGGHHHHHHHG----------GGSCHHHHTTEEECC
T ss_pred HHHHHhhCChhhceEEEEeCCHHHHHHHHHHH----------HhcCHHHHhheEEeC
Confidence 4444555667899999 999999999999999 999999988887653
No 20
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*
Probab=73.72 E-value=0.78 Score=42.18 Aligned_cols=49 Identities=4% Similarity=0.078 Sum_probs=40.8
Q ss_pred hhhchhHhhHHHHhhhHHhh-hccchhHHHHHHHhcCcccccchhhhhhHHhhhhccccc
Q 020379 27 AGQSVGEVAKDAKGNAADVA-ERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLR 85 (327)
Q Consensus 27 ~~~~y~~~~r~~kkNlk~l~-vhp~~~~Ks~w~~~~~~~~~~~~~~~~iS~kf~~k~~~~ 85 (327)
+.+....+...|-.+|+.++ +++.++...+|.+++ ++++++...|+++.
T Consensus 219 ~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivk----------pfl~~kt~~KI~~~ 268 (316)
T 3hx3_A 219 LRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVK----------PFLKSKLLERVFVH 268 (316)
T ss_dssp HHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHG----------GGCCHHHHTTEEEE
T ss_pred HHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHH----------HhCCHHhhhheEEe
Confidence 33445555666778999999 999999999999999 99999999888765
No 21
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=72.20 E-value=1.2 Score=40.14 Aligned_cols=53 Identities=6% Similarity=0.119 Sum_probs=41.4
Q ss_pred hhHHHHhhhHHhh-hccchhHHHHHHHhcCcccccchhhhhhHHhhhhccccccc--cccccchhh
Q 020379 34 VAKDAKGNAADVA-ERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRRG--FSETKDKVA 96 (327)
Q Consensus 34 ~~r~~kkNlk~l~-vhp~~~~Ks~w~~~~~~~~~~~~~~~~iS~kf~~k~~~~~~--~s~l~~~v~ 96 (327)
+-..|=..|++++ +++.++..++|.+++ ++++++...|+.+... .++|.++|.
T Consensus 198 ~q~~YPerl~~i~iiN~P~~f~~~~~iik----------pfl~~~t~~KI~~~~~~~~~~L~~~i~ 253 (296)
T 1aua_A 198 SQNYYPERMGKFYIINAPFGFSTAFRLFK----------PFLDPVTVSKIFILGSSYQKELLKQIP 253 (296)
T ss_dssp HHHHSTTCEEEEEEESCCHHHHHHHHHHG----------GGSCHHHHTTEEECCSCCHHHHTTTSC
T ss_pred HHHhHHHhhCeEEEECchHHHHHHHHHHH----------hhcCHhhcceEEEeCcccHHHHHhhCC
Confidence 3334556789999 999999999999999 9999999999987653 344555554
No 22
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=62.08 E-value=2.3 Score=40.23 Aligned_cols=59 Identities=5% Similarity=0.074 Sum_probs=45.7
Q ss_pred hhchhHhhHHHHhhhHHhh-hccchhHHHHHHHhcCcccccchhhhhhHHhhhhccccccc--cccccchhh
Q 020379 28 GQSVGEVAKDAKGNAADVA-ERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRRG--FSETKDKVA 96 (327)
Q Consensus 28 ~~~y~~~~r~~kkNlk~l~-vhp~~~~Ks~w~~~~~~~~~~~~~~~~iS~kf~~k~~~~~~--~s~l~~~v~ 96 (327)
.+....+...|=..|++++ +++.++..++|.+++ ++++++...|+.+... ..+|.++|.
T Consensus 172 k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ik----------pfl~~~t~~KI~~~~~~~~~~L~~~I~ 233 (403)
T 1olm_A 172 GEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIK----------PFLSEDTRKKIMVLGANWKEVLLKHIS 233 (403)
T ss_dssp HHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHG----------GGSCHHHHHTEEECCTTHHHHHTTTSC
T ss_pred HHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHH----------hhcCHhhhceEEEEChhHHHHHHhhcC
Confidence 3345555566778899999 999999999999999 9999999999987643 334555554
No 23
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=54.74 E-value=2.5 Score=38.89 Aligned_cols=53 Identities=4% Similarity=0.095 Sum_probs=40.1
Q ss_pred hhHHHHhhhHHhh-hccchhHHHHHHHhcCcccccchhhhhhHHhhhhccccccc--cccccchhh
Q 020379 34 VAKDAKGNAADVA-ERVGSAVKSRWALLQEPSTKHAVQERLISAAAITGMFLRRG--FSETKDKVA 96 (327)
Q Consensus 34 ~~r~~kkNlk~l~-vhp~~~~Ks~w~~~~~~~~~~~~~~~~iS~kf~~k~~~~~~--~s~l~~~v~ 96 (327)
+-..|=..|+.++ +++.++..++|.+++ ++++++...|+.+... ..+|.++|.
T Consensus 213 lq~~YPerl~~i~iiN~P~~f~~~~~~ik----------pfl~~~t~~KI~~~~~~~~~~L~~~i~ 268 (320)
T 3q8g_A 213 SQNYYPERMGKFYIIHSPFGFSTMFKMVK----------PFLDPVTVSKIFILGSSYKKELLKQIP 268 (320)
T ss_dssp HHHHSTTCEEEEEEESCCTTHHHHHTTTG----------GGSCHHHHHTEEECCTTHHHHHHHHSC
T ss_pred HHhhCchhhceEEEECCCHHHHHHHHHHH----------HhCCHHHhhhEEEeCCCcHHHHHhhCC
Confidence 3344556788999 999999999999999 9999999999876643 234444443
No 24
>4h5l_A Nucleoprotein; nucleocapsid protein, N protein, RNA binding, RNP, viral protein; 2.75A {Toscana virus}
Probab=37.94 E-value=66 Score=28.41 Aligned_cols=101 Identities=12% Similarity=0.079 Sum_probs=70.8
Q ss_pred CCHHHHHHHHHHHcCCCCCCCCCCCChhhhHHHHHHHHhhCCCCCCChhhHHHHhhHHHHHHHHHHHHhhcchhhHHHHH
Q 020379 176 GDKKVIQHLVSMYNQDPNASLPEGVNPFDVAALAKYYLASLPEPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLE 255 (327)
Q Consensus 176 g~~~~i~~L~~~~d~~~~~~~~~~~d~~~va~lLK~fLr~LPePLl~~~ly~~~~~~~~~i~~l~~ll~~LP~~n~~~L~ 255 (327)
.+...|..+.+.|. .+++|++.|..+||.-=...++-.- .+....+.-...+-+....+..++.+....++.
T Consensus 18 ~d~~~i~~~v~~f~-------YqGFDa~~vi~~l~erg~~~g~~~~-~D~k~mIVl~ltRGNk~~km~~kms~~Gk~~~~ 89 (253)
T 4h5l_A 18 ADSGTINAWVNEFA-------YQGFDPKRIVQLVKERGTAKGRDWK-KDVKMMIVLNLVRGNKPEAMMKKMSEKGASIVA 89 (253)
T ss_dssp CCHHHHHHHHHHHS-------BCSSCHHHHHHHHHHHHHHTTCCHH-HHHHHHHHHHHHHCSCHHHHHHTSCHHHHHHHH
T ss_pred ccHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHhccchhhHH-HhHHHHhhhhhhcCCCHHHHHHHhCHHHHHHHH
Confidence 35677788888886 3568999988888764333332111 122111222233446677888889999999999
Q ss_pred HHHHHHHHHHhccccCCCChhhhHHHhhh
Q 020379 256 YVTALLLRVSQKSLLNKMDARSLAMEMAP 284 (327)
Q Consensus 256 ~L~~~L~~V~~~s~~NkM~~~nLAivf~P 284 (327)
.|+.+..-+..+...+-.|...+|.+|++
T Consensus 90 ~Li~~Y~Lk~~~~~r~~lTLsRVAa~fa~ 118 (253)
T 4h5l_A 90 NLISVYQLKEGNPGRDTITLSRVSAAFVP 118 (253)
T ss_dssp HHHHHHTBCSSSCCTTCBCHHHHHHHTHH
T ss_pred HHHHHhCcccCCCCcccccHHHHHHHhhH
Confidence 99999988888777888999999999986
No 25
>2o3f_A Putative HTH-type transcriptional regulator YBBH; APC85504, putative transcriptional regulator YBBH; HET: MLY; 1.75A {Bacillus subtilis} SCOP: a.4.1.20
Probab=27.00 E-value=75 Score=23.98 Aligned_cols=42 Identities=7% Similarity=0.067 Sum_probs=33.0
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhhHHHhh
Q 020379 236 IHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLAMEMA 283 (327)
Q Consensus 236 i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLAivf~ 283 (327)
+..++.....|++..+.+..|++.+...|.. |++..||.--+
T Consensus 9 ~~~i~~~~~~ls~~e~~ia~yil~~~~~~~~------~si~elA~~~~ 50 (111)
T 2o3f_A 9 LAIIQSMXHXLPPSERKLADYILAHPHXAIE------STVNEISALAN 50 (111)
T ss_dssp HHHHHHHGGGSCHHHHHHHHHHHHCHHHHHT------CCHHHHHHHTT
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHChHHHHh------cCHHHHHHHHC
Confidence 3456667788999999999999999988776 77777775443
No 26
>3iwf_A Transcription regulator RPIR family; transcriptional, N-terminal, PSI, MCSG, structural genomics, midwest center structural genomics; 1.40A {Staphylococcus epidermidis}
Probab=25.70 E-value=81 Score=23.71 Aligned_cols=42 Identities=10% Similarity=0.196 Sum_probs=34.1
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhccccCCCChhhhHHHhh
Q 020379 236 IHAMRNTLKKLSNVNFMTLEYVTALLLRVSQKSLLNKMDARSLAMEMA 283 (327)
Q Consensus 236 i~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLAivf~ 283 (327)
+..++.....|++..+.+..|++.+...+.. |++..||.-.+
T Consensus 5 ~~~I~~~~~~lt~~e~~ia~yil~~~~~~~~------~si~elA~~~~ 46 (107)
T 3iwf_A 5 LYKIDNQYPYFTKNEKKIAQFILNYPHKVVN------MTSQEIANQLE 46 (107)
T ss_dssp HHHHHHHGGGSCHHHHHHHHHHHHCHHHHTT------CCHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhCHHHHHH------CCHHHHHHHHC
Confidence 4567788889999999999999999977766 77888875443
No 27
>3kat_A Nacht, LRR and PYD domains-containing protein 1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 3.10A {Homo sapiens}
Probab=25.40 E-value=93 Score=23.65 Aligned_cols=46 Identities=11% Similarity=0.081 Sum_probs=35.0
Q ss_pred CCCCChhhHHHHhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q 020379 218 EPLTTFELYDEIKGARSSIHAMRNTLKKLSNVNFMTLEYVTALLLR 263 (327)
Q Consensus 218 ePLl~~~ly~~~~~~~~~i~~l~~ll~~LP~~n~~~L~~L~~~L~~ 263 (327)
+.+|+.+-|+.+.+....-...+.++..+|.-.......++..|..
T Consensus 45 ~~VLteee~e~I~ae~T~q~k~R~Lld~v~~kG~~A~~~F~~~L~e 90 (107)
T 3kat_A 45 GQVLSQEQYERVLAENTRPSQMRKLFSLSQSWDRKCKDGLYQALKE 90 (107)
T ss_dssp TTTSCHHHHHHHHHCCSHHHHHHHHHHGGGGCCTTHHHHHHHHHHH
T ss_pred HhhCCHHHHHHHHhCCCCHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Confidence 3499999999998876677888889988887666666666665543
No 28
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=25.25 E-value=5.8 Score=35.36 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=31.2
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCcCeeeccCCHHHHHHH
Q 020379 147 GKPVPHILVKCADYLVLSGLNSQFLFKAEGDKKVIQHL 184 (327)
Q Consensus 147 ~~~VP~il~~~i~~i~~~gl~~eGIFR~sg~~~~i~~L 184 (327)
...+|..+..|+.-....|+...||||++|..+.|-..
T Consensus 209 ~~~~~~~l~~~~~~~~~~~l~~~g~~~v~~~~~~v~~~ 246 (263)
T 3a8p_A 209 ELPNPKSLLAATSRPSKLALGRLGVLSVSSFHALVCSR 246 (263)
T ss_dssp CCCCHHHHHTTCCHHHHHHHHHHTCCSHHHHHHHHHHT
T ss_pred CccchHHHHHHhcccccccccccEEEEeccceeeeeec
Confidence 34667999999988888899999999999988865443
Done!