Query 020390
Match_columns 327
No_of_seqs 252 out of 2305
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 09:22:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020390.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020390hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0462 PrsA Phosphoribosylpyr 100.0 5E-83 1.1E-87 596.5 31.8 294 14-326 2-301 (314)
2 PLN02297 ribose-phosphate pyro 100.0 4.5E-79 9.7E-84 579.6 34.4 317 10-327 10-326 (326)
3 PRK04923 ribose-phosphate pyro 100.0 2.7E-76 5.8E-81 561.7 32.7 297 12-326 2-305 (319)
4 PRK00553 ribose-phosphate pyro 100.0 6E-75 1.3E-79 555.2 33.5 295 13-326 6-309 (332)
5 PRK02269 ribose-phosphate pyro 100.0 5.3E-75 1.2E-79 554.0 32.7 294 14-326 3-304 (320)
6 PTZ00145 phosphoribosylpyropho 100.0 6.3E-75 1.4E-79 566.1 32.6 293 15-326 118-423 (439)
7 PRK02458 ribose-phosphate pyro 100.0 2.4E-74 5.2E-79 549.5 32.6 296 11-326 4-304 (323)
8 PRK07199 phosphoribosylpyropho 100.0 1.6E-72 3.5E-77 532.8 32.4 282 16-326 2-291 (301)
9 PRK02812 ribose-phosphate pyro 100.0 6.2E-72 1.4E-76 533.6 32.6 296 11-326 16-317 (330)
10 PRK03092 ribose-phosphate pyro 100.0 2.7E-71 5.8E-76 525.1 29.8 280 28-326 1-288 (304)
11 PRK01259 ribose-phosphate pyro 100.0 2.6E-70 5.6E-75 519.7 32.3 291 17-326 1-296 (309)
12 KOG1448 Ribose-phosphate pyrop 100.0 7.3E-71 1.6E-75 504.3 22.8 293 15-326 2-301 (316)
13 PRK00934 ribose-phosphate pyro 100.0 2.1E-69 4.6E-74 508.7 31.7 280 18-326 1-284 (285)
14 PRK06827 phosphoribosylpyropho 100.0 2.8E-69 6E-74 522.4 32.7 297 14-326 6-355 (382)
15 PLN02369 ribose-phosphate pyro 100.0 6.4E-68 1.4E-72 501.6 30.5 282 26-326 1-289 (302)
16 TIGR01251 ribP_PPkin ribose-ph 100.0 9.9E-67 2.1E-71 495.7 33.0 288 17-326 1-295 (308)
17 KOG1503 Phosphoribosylpyrophos 100.0 3.7E-57 7.9E-62 402.5 25.3 295 13-326 5-335 (354)
18 PF13793 Pribosyltran_N: N-ter 100.0 1.5E-36 3.2E-41 249.3 13.1 113 17-133 1-115 (116)
19 PF14572 Pribosyl_synth: Phosp 100.0 9.8E-33 2.1E-37 241.1 12.8 137 182-326 2-171 (184)
20 PRK13811 orotate phosphoribosy 99.7 4.3E-16 9.3E-21 136.4 14.5 150 124-282 3-155 (170)
21 PRK11595 DNA utilization prote 99.6 2.3E-15 4.9E-20 137.6 6.2 155 96-268 61-225 (227)
22 PRK08525 amidophosphoribosyltr 99.5 5E-14 1.1E-18 140.4 12.8 144 171-322 263-425 (445)
23 PLN02293 adenine phosphoribosy 99.5 4.7E-13 1E-17 118.8 14.7 111 169-282 51-177 (187)
24 COG1040 ComFC Predicted amidop 99.5 8.7E-14 1.9E-18 127.0 8.8 151 96-268 65-222 (225)
25 PRK13812 orotate phosphoribosy 99.4 2.5E-12 5.3E-17 113.2 13.7 112 168-282 44-158 (176)
26 TIGR01203 HGPRTase hypoxanthin 99.4 9.4E-13 2E-17 114.8 10.7 101 168-268 11-122 (166)
27 TIGR00201 comF comF family pro 99.4 1.6E-13 3.4E-18 122.1 5.7 147 100-267 36-189 (190)
28 COG0634 Hpt Hypoxanthine-guani 99.4 2.2E-12 4.8E-17 111.6 11.0 104 168-274 20-134 (178)
29 PRK09162 hypoxanthine-guanine 99.4 3E-12 6.4E-17 113.2 11.6 100 168-267 25-134 (181)
30 PRK15423 hypoxanthine phosphor 99.3 7.8E-12 1.7E-16 110.2 11.4 104 168-274 17-133 (178)
31 PF00156 Pribosyltran: Phospho 99.3 8.9E-12 1.9E-16 102.3 10.4 99 168-267 13-125 (125)
32 PRK02304 adenine phosphoribosy 99.3 1.8E-11 3.8E-16 107.6 12.8 97 183-279 51-163 (175)
33 PRK02277 orotate phosphoribosy 99.3 1.5E-11 3.2E-16 110.5 12.0 107 169-279 72-186 (200)
34 PLN02238 hypoxanthine phosphor 99.3 1.2E-11 2.5E-16 110.1 11.1 105 168-275 20-139 (189)
35 PRK13809 orotate phosphoribosy 99.3 1.6E-11 3.5E-16 110.6 11.9 123 169-298 52-180 (206)
36 PRK12560 adenine phosphoribosy 99.3 3.1E-11 6.7E-16 107.3 12.8 128 169-301 37-181 (187)
37 PRK05793 amidophosphoribosyltr 99.3 1.2E-11 2.7E-16 124.1 10.9 144 171-322 276-438 (469)
38 TIGR01090 apt adenine phosphor 99.3 4.8E-11 1E-15 104.3 12.3 109 169-280 35-159 (169)
39 TIGR00336 pyrE orotate phospho 99.3 4.1E-11 8.9E-16 105.2 10.7 109 170-281 43-159 (173)
40 PRK05205 bifunctional pyrimidi 99.3 3.3E-11 7.1E-16 106.0 9.9 100 168-267 15-133 (176)
41 PRK07322 adenine phosphoribosy 99.2 6.9E-11 1.5E-15 104.2 11.9 99 169-267 38-157 (178)
42 PRK00129 upp uracil phosphorib 99.2 8E-11 1.7E-15 106.4 11.7 110 183-301 70-186 (209)
43 PRK00455 pyrE orotate phosphor 99.2 1.5E-10 3.3E-15 103.9 12.9 112 169-282 51-164 (202)
44 TIGR01367 pyrE_Therm orotate p 99.2 2.7E-10 5.9E-15 101.2 11.4 97 169-268 45-143 (187)
45 PTZ00271 hypoxanthine-guanine 99.1 3E-10 6.5E-15 102.6 11.1 104 168-274 36-159 (211)
46 PRK09219 xanthine phosphoribos 99.1 8.5E-10 1.8E-14 98.2 13.8 114 183-301 50-183 (189)
47 PTZ00149 hypoxanthine phosphor 99.1 2.1E-10 4.5E-15 105.4 10.1 99 168-266 66-186 (241)
48 PRK13810 orotate phosphoribosy 99.1 5.7E-10 1.2E-14 99.1 12.0 98 183-282 73-173 (187)
49 TIGR01744 XPRTase xanthine pho 99.1 9.8E-10 2.1E-14 98.0 13.5 127 169-300 35-182 (191)
50 COG0461 PyrE Orotate phosphori 99.1 1.7E-09 3.7E-14 96.6 12.1 99 183-282 61-163 (201)
51 COG0856 Orotate phosphoribosyl 99.1 6.3E-10 1.4E-14 95.9 8.3 107 169-278 72-186 (203)
52 TIGR01091 upp uracil phosphori 99.0 1.2E-09 2.5E-14 98.7 10.4 98 183-282 68-172 (207)
53 PRK08558 adenine phosphoribosy 99.0 9.5E-09 2.1E-13 94.7 12.8 111 169-280 96-225 (238)
54 PRK07272 amidophosphoribosyltr 98.9 3.2E-09 7E-14 106.8 9.8 148 169-323 271-436 (484)
55 PRK09123 amidophosphoribosyltr 98.9 1.6E-08 3.5E-13 101.8 12.1 112 170-282 282-420 (479)
56 PRK05500 bifunctional orotidin 98.8 2.9E-08 6.2E-13 99.6 12.3 98 183-282 344-444 (477)
57 COG0503 Apt Adenine/guanine ph 98.8 3.8E-08 8.3E-13 86.9 11.6 110 169-281 42-167 (179)
58 PRK06031 phosphoribosyltransfe 98.8 7.2E-08 1.6E-12 88.5 13.3 127 170-301 70-220 (233)
59 TIGR01743 purR_Bsub pur operon 98.8 8.6E-08 1.9E-12 89.5 12.8 121 170-300 114-254 (268)
60 KOG1712 Adenine phosphoribosyl 98.8 4.4E-08 9.6E-13 83.5 9.5 114 168-281 44-173 (183)
61 PLN02440 amidophosphoribosyltr 98.8 3.5E-08 7.6E-13 99.5 10.2 97 170-267 262-377 (479)
62 COG1926 Predicted phosphoribos 98.7 1.1E-07 2.4E-12 84.7 11.0 123 168-300 10-184 (220)
63 PRK09213 pur operon repressor; 98.7 1.5E-07 3.3E-12 88.1 12.5 122 170-301 116-257 (271)
64 PRK09246 amidophosphoribosyltr 98.7 1.4E-08 3E-13 103.0 5.8 50 225-274 353-402 (501)
65 PRK08341 amidophosphoribosyltr 98.7 3.3E-08 7.1E-13 98.7 8.2 99 171-270 259-374 (442)
66 PRK09177 xanthine-guanine phos 98.7 1.5E-07 3.2E-12 81.4 10.1 91 168-265 18-114 (156)
67 PRK07349 amidophosphoribosyltr 98.6 1.1E-07 2.4E-12 96.1 9.3 99 170-268 299-415 (500)
68 COG2236 Predicted phosphoribos 98.6 9.7E-08 2.1E-12 84.9 7.5 94 168-262 15-119 (192)
69 TIGR01134 purF amidophosphorib 98.6 1.4E-07 3E-12 94.4 9.2 145 170-322 260-423 (442)
70 PRK06781 amidophosphoribosyltr 98.6 1.1E-07 2.4E-12 95.6 8.2 102 171-272 271-390 (471)
71 PRK07631 amidophosphoribosyltr 98.6 1.8E-07 4E-12 94.0 8.2 104 171-274 271-392 (475)
72 KOG3367 Hypoxanthine-guanine p 98.5 3.5E-07 7.6E-12 78.9 8.4 104 168-274 45-166 (216)
73 PRK06388 amidophosphoribosyltr 98.3 1.3E-06 2.8E-11 88.0 8.2 44 226-269 352-395 (474)
74 TIGR01251 ribP_PPkin ribose-ph 98.3 2.6E-05 5.7E-10 74.5 15.4 137 15-179 160-297 (308)
75 PRK07847 amidophosphoribosyltr 98.2 3.3E-06 7.1E-11 85.7 7.4 98 171-269 290-406 (510)
76 COG0035 Upp Uracil phosphoribo 98.0 2.9E-05 6.4E-10 69.6 8.6 97 184-282 71-175 (210)
77 PF14681 UPRTase: Uracil phosp 98.0 4.6E-05 9.9E-10 68.8 9.6 97 184-282 68-173 (207)
78 PLN02541 uracil phosphoribosyl 97.8 0.00011 2.3E-09 68.0 8.9 96 185-282 104-209 (244)
79 COG2065 PyrR Pyrimidine operon 97.7 0.00031 6.8E-09 60.5 9.5 97 170-266 17-133 (179)
80 COG0034 PurF Glutamine phospho 97.6 0.00012 2.5E-09 72.4 6.4 98 170-268 270-386 (470)
81 KOG0572 Glutamine phosphoribos 97.1 0.0011 2.4E-08 64.2 6.6 42 224-265 350-391 (474)
82 PRK07199 phosphoribosylpyropho 96.9 0.044 9.5E-07 52.4 15.4 133 15-179 161-293 (301)
83 PRK00934 ribose-phosphate pyro 96.6 0.088 1.9E-06 49.9 14.9 128 15-177 155-284 (285)
84 PRK04923 ribose-phosphate pyro 96.4 0.19 4.1E-06 48.5 16.0 140 14-179 166-307 (319)
85 PRK03092 ribose-phosphate pyro 96.1 0.36 7.7E-06 46.2 16.2 141 14-179 148-290 (304)
86 PRK02458 ribose-phosphate pyro 95.9 0.27 5.8E-06 47.5 14.5 136 16-179 171-306 (323)
87 PRK02812 ribose-phosphate pyro 95.6 0.62 1.3E-05 45.1 15.7 133 185-326 22-174 (330)
88 PLN02369 ribose-phosphate pyro 95.3 0.85 1.8E-05 43.6 15.4 141 15-180 151-292 (302)
89 PRK01259 ribose-phosphate pyro 95.2 0.8 1.7E-05 43.9 15.1 139 16-179 160-298 (309)
90 PRK15423 hypoxanthine phosphor 95.2 0.4 8.6E-06 42.3 11.9 93 16-111 36-136 (178)
91 PTZ00145 phosphoribosylpyropho 95.0 0.46 1E-05 47.6 12.9 135 183-325 118-273 (439)
92 PRK00553 ribose-phosphate pyro 94.7 0.85 1.8E-05 44.2 13.9 126 192-325 16-161 (332)
93 PF15609 PRTase_2: Phosphoribo 94.7 0.052 1.1E-06 48.3 4.9 38 229-266 120-157 (191)
94 PRK02269 ribose-phosphate pyro 94.7 0.59 1.3E-05 45.0 12.7 127 191-325 11-157 (320)
95 COG0462 PrsA Phosphoribosylpyr 94.4 0.72 1.6E-05 44.2 12.1 109 210-326 31-157 (314)
96 PRK09162 hypoxanthine-guanine 94.0 0.87 1.9E-05 40.1 11.2 88 15-105 41-134 (181)
97 PF13793 Pribosyltran_N: N-ter 93.5 1.3 2.8E-05 36.3 10.6 75 191-265 6-86 (116)
98 TIGR01203 HGPRTase hypoxanthin 93.2 1.9 4E-05 37.5 11.8 89 14-105 26-121 (166)
99 PLN02238 hypoxanthine phosphor 91.7 3.3 7.3E-05 36.7 11.7 88 15-105 36-134 (189)
100 PLN02297 ribose-phosphate pyro 91.6 4.4 9.6E-05 39.2 13.2 130 188-326 19-177 (326)
101 KOG1017 Predicted uracil phosp 91.5 0.64 1.4E-05 41.7 6.7 73 224-304 183-257 (267)
102 PRK06827 phosphoribosylpyropho 90.5 2.2 4.8E-05 42.2 10.2 141 16-179 209-357 (382)
103 PTZ00271 hypoxanthine-guanine 87.6 10 0.00023 34.3 11.6 87 22-110 65-161 (211)
104 PRK00129 upp uracil phosphorib 87.5 7.5 0.00016 35.0 10.7 87 16-104 71-160 (209)
105 TIGR01091 upp uracil phosphori 85.6 6.4 0.00014 35.4 9.2 87 16-104 69-158 (207)
106 COG0634 Hpt Hypoxanthine-guani 84.8 16 0.00034 32.3 10.8 87 15-104 35-129 (178)
107 PTZ00149 hypoxanthine phosphor 84.2 14 0.00031 34.2 10.9 90 14-105 81-187 (241)
108 PF15610 PRTase_3: PRTase ComF 82.9 1.9 4.1E-05 40.5 4.5 40 226-265 134-173 (274)
109 TIGR01090 apt adenine phosphor 82.4 7.7 0.00017 33.5 8.0 77 23-102 55-143 (169)
110 PLN02440 amidophosphoribosyltr 78.5 24 0.00052 36.0 11.3 125 14-149 275-421 (479)
111 PRK05205 bifunctional pyrimidi 78.3 24 0.00051 30.7 9.8 88 16-105 33-133 (176)
112 PRK09123 amidophosphoribosyltr 77.9 34 0.00074 34.9 12.1 87 14-103 295-395 (479)
113 PF00156 Pribosyltran: Phospho 77.2 19 0.00042 28.6 8.4 78 23-104 36-124 (125)
114 PRK13811 orotate phosphoribosy 77.0 14 0.00031 32.0 8.0 68 23-97 65-133 (170)
115 PRK07272 amidophosphoribosyltr 76.3 7 0.00015 39.9 6.6 124 15-149 286-431 (484)
116 PRK02304 adenine phosphoribosy 76.1 27 0.00059 30.2 9.6 74 23-99 60-145 (175)
117 PRK02277 orotate phosphoribosy 75.1 22 0.00047 31.8 8.8 84 16-103 87-175 (200)
118 PRK08525 amidophosphoribosyltr 69.1 44 0.00096 33.7 10.4 94 15-111 276-383 (445)
119 PRK05793 amidophosphoribosyltr 67.8 46 0.001 33.8 10.3 93 15-110 289-395 (469)
120 PRK00455 pyrE orotate phosphor 65.4 67 0.0015 28.5 9.8 81 15-101 65-146 (202)
121 PRK08341 amidophosphoribosyltr 65.2 52 0.0011 33.2 10.0 87 15-104 272-370 (442)
122 TIGR01134 purF amidophosphorib 62.4 1.1E+02 0.0024 30.9 11.7 87 15-104 274-374 (442)
123 TIGR01367 pyrE_Therm orotate p 61.2 1.2E+02 0.0025 26.8 10.5 80 15-101 59-138 (187)
124 PF01488 Shikimate_DH: Shikima 60.9 20 0.00043 29.7 5.2 37 225-265 7-43 (135)
125 PRK13812 orotate phosphoribosy 60.6 80 0.0017 27.6 9.2 76 23-105 67-146 (176)
126 PLN02293 adenine phosphoribosy 60.5 1.2E+02 0.0026 26.8 10.6 75 23-101 71-158 (187)
127 PF14572 Pribosyl_synth: Phosp 57.6 18 0.0004 32.1 4.6 94 60-179 77-173 (184)
128 cd01080 NAD_bind_m-THF_DH_Cycl 57.4 86 0.0019 27.2 8.8 77 225-318 39-116 (168)
129 PRK12560 adenine phosphoribosy 54.5 94 0.002 27.4 8.7 74 23-100 60-146 (187)
130 TIGR00336 pyrE orotate phospho 52.7 75 0.0016 27.5 7.7 70 23-98 63-138 (173)
131 smart00450 RHOD Rhodanese Homo 49.4 35 0.00075 25.2 4.5 35 227-264 53-87 (100)
132 COG2185 Sbm Methylmalonyl-CoA 49.4 31 0.00068 29.4 4.5 42 246-295 80-121 (143)
133 TIGR00640 acid_CoA_mut_C methy 47.5 34 0.00075 28.5 4.5 59 232-298 55-114 (132)
134 cd01444 GlpE_ST GlpE sulfurtra 46.7 34 0.00075 25.7 4.1 32 229-263 55-86 (96)
135 PF14681 UPRTase: Uracil phosp 46.5 1.8E+02 0.0039 26.0 9.3 84 16-102 68-157 (207)
136 PF10662 PduV-EutP: Ethanolami 46.4 35 0.00075 29.1 4.4 41 238-281 100-140 (143)
137 cd01529 4RHOD_Repeats Member o 46.3 39 0.00084 25.7 4.4 33 229-264 55-87 (96)
138 PF01380 SIS: SIS domain SIS d 46.0 18 0.0004 28.8 2.6 81 12-98 3-83 (131)
139 cd00158 RHOD Rhodanese Homolog 45.1 44 0.00095 24.3 4.4 34 228-264 48-81 (89)
140 KOG0814 Glyoxylase [General fu 45.0 26 0.00057 31.1 3.5 45 221-268 22-66 (237)
141 cd05014 SIS_Kpsf KpsF-like pro 44.6 1.1E+02 0.0025 24.2 7.2 77 16-99 2-78 (128)
142 PRK09246 amidophosphoribosyltr 43.8 1.2E+02 0.0025 31.3 8.5 85 16-103 295-393 (501)
143 PRK07349 amidophosphoribosyltr 43.1 78 0.0017 32.6 7.1 78 24-104 322-413 (500)
144 cd05008 SIS_GlmS_GlmD_1 SIS (S 42.1 79 0.0017 25.1 5.8 80 17-104 2-81 (126)
145 PF02702 KdpD: Osmosensitive K 40.4 93 0.002 28.2 6.3 133 173-320 26-166 (211)
146 cd05009 SIS_GlmS_GlmD_2 SIS (S 40.2 1E+02 0.0022 25.1 6.4 88 11-104 10-97 (153)
147 PF02875 Mur_ligase_C: Mur lig 39.7 1.5E+02 0.0032 22.3 6.8 34 232-265 13-47 (91)
148 cd01523 RHOD_Lact_B Member of 39.0 53 0.0012 25.0 4.2 28 229-259 60-87 (100)
149 PRK11595 DNA utilization prote 38.2 1E+02 0.0022 27.9 6.5 40 61-102 182-221 (227)
150 COG2236 Predicted phosphoribos 35.3 2.2E+02 0.0048 25.4 8.0 72 14-85 29-106 (192)
151 PF12641 Flavodoxin_3: Flavodo 35.0 1.8E+02 0.0038 25.1 7.1 18 20-37 5-23 (160)
152 cd01518 RHOD_YceA Member of th 34.8 74 0.0016 24.3 4.4 33 229-264 60-92 (101)
153 PRK13809 orotate phosphoribosy 32.9 2.6E+02 0.0056 25.1 8.1 71 24-99 77-149 (206)
154 COG0856 Orotate phosphoribosyl 32.2 1.8E+02 0.004 25.8 6.6 71 24-101 96-174 (203)
155 cd05710 SIS_1 A subgroup of th 32.1 93 0.002 24.9 4.7 81 17-104 2-82 (120)
156 cd01528 RHOD_2 Member of the R 32.0 89 0.0019 23.8 4.4 33 229-264 57-89 (101)
157 PRK15482 transcriptional regul 31.9 75 0.0016 29.6 4.7 82 13-102 134-215 (285)
158 cd01532 4RHOD_Repeat_1 Member 31.6 79 0.0017 23.9 4.0 32 229-263 49-82 (92)
159 cd01519 RHOD_HSP67B2 Member of 31.3 81 0.0018 24.1 4.1 33 229-264 65-97 (106)
160 COG0287 TyrA Prephenate dehydr 31.2 46 0.00099 31.5 3.1 53 241-302 96-148 (279)
161 TIGR00393 kpsF KpsF/GutQ famil 30.4 1.4E+02 0.003 27.2 6.1 78 16-100 2-79 (268)
162 PF04015 DUF362: Domain of unk 30.1 1.4E+02 0.0029 26.3 5.8 83 239-324 18-104 (206)
163 PLN02501 digalactosyldiacylgly 29.5 1E+02 0.0022 33.4 5.4 88 21-115 283-374 (794)
164 TIGR02990 ectoine_eutA ectoine 29.5 33 0.00071 31.7 1.7 91 16-108 9-132 (239)
165 PRK06781 amidophosphoribosyltr 29.3 3.2E+02 0.0069 27.9 8.9 90 14-106 283-386 (471)
166 PF08410 DUF1737: Domain of un 28.8 1.7E+02 0.0036 20.7 4.8 37 16-52 5-42 (54)
167 cd01527 RHOD_YgaP Member of th 28.7 95 0.0021 23.5 4.1 32 229-263 53-84 (99)
168 TIGR01809 Shik-DH-AROM shikima 28.3 1.1E+02 0.0024 28.7 5.2 35 227-265 122-156 (282)
169 cd05013 SIS_RpiR RpiR-like pro 28.2 1.2E+02 0.0027 23.8 4.9 85 12-104 11-95 (139)
170 PRK11070 ssDNA exonuclease Rec 27.8 3E+02 0.0064 28.9 8.6 69 65-148 68-136 (575)
171 PRK00676 hemA glutamyl-tRNA re 27.8 1.1E+02 0.0025 29.7 5.2 37 225-265 169-205 (338)
172 PLN02962 hydroxyacylglutathion 26.2 2.3E+02 0.005 26.2 6.8 41 228-271 33-73 (251)
173 COG1751 Uncharacterized conser 25.9 1.1E+02 0.0023 26.7 4.0 75 241-326 36-118 (186)
174 cd04820 PA_M28_1_1 PA_M28_1_1: 25.8 1.4E+02 0.0031 25.1 4.8 41 225-265 45-93 (137)
175 cd01525 RHOD_Kc Member of the 25.7 1.3E+02 0.0029 22.8 4.4 33 229-264 64-96 (105)
176 cd01524 RHOD_Pyr_redox Member 25.6 1.3E+02 0.0029 22.3 4.4 31 230-264 51-81 (90)
177 cd04814 PA_M28_1 PA_M28_1: Pro 25.1 1.6E+02 0.0035 24.9 5.0 41 225-265 43-97 (142)
178 COG0784 CheY FOG: CheY-like re 24.8 2.5E+02 0.0054 21.6 6.0 45 228-281 3-49 (130)
179 PRK07631 amidophosphoribosyltr 24.6 4.9E+02 0.011 26.6 9.3 89 15-106 284-386 (475)
180 cd01447 Polysulfide_ST Polysul 24.6 89 0.0019 23.6 3.2 32 229-263 60-91 (103)
181 cd01533 4RHOD_Repeat_2 Member 24.3 1.4E+02 0.0031 23.1 4.4 32 229-263 65-97 (109)
182 PLN02160 thiosulfate sulfurtra 24.2 1.2E+02 0.0027 25.0 4.2 44 229-282 80-123 (136)
183 COG0503 Apt Adenine/guanine ph 23.4 3.2E+02 0.007 23.8 6.9 69 25-97 64-145 (179)
184 PRK14093 UDP-N-acetylmuramoyla 23.3 6.2E+02 0.013 25.5 9.8 107 27-150 297-411 (479)
185 PF00185 OTCace: Aspartate/orn 23.2 1.4E+02 0.003 25.4 4.4 37 229-268 1-37 (158)
186 TIGR02981 phageshock_pspE phag 22.9 1.8E+02 0.0038 22.8 4.6 32 229-263 57-88 (101)
187 TIGR01573 cas2 CRISPR-associat 22.9 1.1E+02 0.0024 23.8 3.4 50 232-281 2-54 (95)
188 COG1184 GCD2 Translation initi 22.9 85 0.0018 30.1 3.2 50 246-303 102-158 (301)
189 PRK08105 flavodoxin; Provision 22.8 2.9E+02 0.0063 23.1 6.3 64 16-86 3-73 (149)
190 PF14502 HTH_41: Helix-turn-he 22.2 89 0.0019 21.6 2.4 22 241-262 18-39 (48)
191 PRK07847 amidophosphoribosyltr 22.1 6.8E+02 0.015 25.8 9.8 79 24-105 312-404 (510)
192 COG2185 Sbm Methylmalonyl-CoA 22.0 1.4E+02 0.003 25.5 4.0 32 67-100 64-96 (143)
193 PRK06388 amidophosphoribosyltr 21.9 7E+02 0.015 25.4 9.8 78 26-106 303-394 (474)
194 COG4373 Mu-like prophage FluMu 21.8 3.6E+02 0.0079 26.7 7.2 94 10-107 55-174 (509)
195 PRK05320 rhodanese superfamily 21.7 1.5E+02 0.0033 27.5 4.7 33 228-263 173-205 (257)
196 PF05124 S_layer_C: S-layer li 21.7 2.8E+02 0.0061 25.4 6.2 54 14-77 154-208 (222)
197 cd03412 CbiK_N Anaerobic cobal 21.6 1.3E+02 0.0028 24.7 3.7 56 244-301 56-111 (127)
198 cd01526 RHOD_ThiF Member of th 21.5 1.4E+02 0.003 23.8 3.9 33 229-264 71-104 (122)
199 TIGR03572 WbuZ glycosyl amidat 21.5 5.8E+02 0.013 22.7 9.0 69 122-209 31-101 (232)
200 cd05017 SIS_PGI_PMI_1 The memb 21.1 4.2E+02 0.0091 20.9 6.9 77 17-104 2-78 (119)
201 KOG1448 Ribose-phosphate pyrop 21.1 2.3E+02 0.005 27.2 5.7 93 13-110 161-256 (316)
202 TIGR01697 PNPH-PUNA-XAPA inosi 21.0 1.8E+02 0.0038 26.7 4.9 65 225-302 45-114 (248)
203 COG1926 Predicted phosphoribos 20.9 1.8E+02 0.0039 26.5 4.7 66 62-151 120-185 (220)
204 PF02633 Creatininase: Creatin 20.8 94 0.002 28.2 3.0 69 79-151 38-111 (237)
205 TIGR01744 XPRTase xanthine pho 20.6 5.8E+02 0.013 22.5 8.0 71 23-97 59-146 (191)
206 PRK11557 putative DNA-binding 20.4 1.6E+02 0.0036 27.0 4.6 83 12-103 126-209 (278)
207 cd05005 SIS_PHI Hexulose-6-pho 20.4 5.4E+02 0.012 21.9 7.7 77 13-103 32-109 (179)
No 1
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=100.00 E-value=5e-83 Score=596.47 Aligned_cols=294 Identities=30% Similarity=0.449 Sum_probs=270.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHHh
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYAL 91 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~al 91 (327)
..++++|+|++|++||++||++|| .+++++++++||||| ++|+++|+|||+||||+||+++| |+|||||+|+|||
T Consensus 2 ~~~~~if~g~s~~~La~~ia~~l~-~~l~~~~~~rF~DGE--~~V~i~EsVrg~dVfI~qs~~~pvnd~lmELLi~idA~ 78 (314)
T COG0462 2 MNNMKIFSGSSNPELAEKIAKRLG-IPLGKVEVKRFPDGE--IYVRIEESVRGKDVFIIQSTSPPVNDNLMELLIMIDAL 78 (314)
T ss_pred CCceEEEECCCCHHHHHHHHHHhC-CCcccceeEEcCCCc--EEEEecccccCCeEEEEeCCCCCcCHHHHHHHHHHHHH
Confidence 468999999999999999999996 999999999999998 56677799999999999999996 7899999999999
Q ss_pred hhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHH
Q 020390 92 PRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL 171 (327)
Q Consensus 92 ~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~ 171 (327)
||+||++||+|+|||||+||||++++|||+|+|++|+||+. +|+|+|+|+|+|++|++|||++|++++ .+.+.
T Consensus 79 k~asA~~It~ViPY~gYARQDk~~~~repIsaklvA~lL~~-----aG~drv~TvDlH~~qiqgfFdipvdnl--~a~p~ 151 (314)
T COG0462 79 KRASAKRITAVIPYFGYARQDKAFKPREPISAKLVANLLET-----AGADRVLTVDLHAPQIQGFFDIPVDNL--YAAPL 151 (314)
T ss_pred HhcCCceEEEEeecchhhccCcccCCCCCEeHHHHHHHHHH-----cCCCeEEEEcCCchhhcccCCCccccc--cchHH
Confidence 99999999999999999999988899999999999999996 599999999999999999999999998 48999
Q ss_pred HHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeee-CCccE-EEeecCCCCCCeEEEEeccccChhhHH
Q 020390 172 LKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVRE-GDKRI-VRIKEGNPAGCHVVIVDDLVQSGGTLI 247 (327)
Q Consensus 172 la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~-~~~~~-~~~~~~~v~gk~viivDDii~TG~Tl~ 247 (327)
+++|+.+.+..++++||+||.||++||+.+++ +.++++++|+|. ....+ ...+.||++||+|+|||||++||||+.
T Consensus 152 l~~~~~~~~~~~d~vVVSPD~Ggv~RAr~~A~~L~~~~a~i~K~R~~~~~~v~~~~~~gdV~gk~~iiVDDiIdTgGTi~ 231 (314)
T COG0462 152 LAEYIREKYDLDDPVVVSPDKGGVKRARALADRLGAPLAIIDKRRDSSPNVVEVMNLIGDVEGKDVVIVDDIIDTGGTIA 231 (314)
T ss_pred HHHHHHHhcCCCCcEEECCCccHHHHHHHHHHHhCCCEEEEEEeecCCCCeEEEeecccccCCCEEEEEeccccccHHHH
Confidence 99999886545569999999999999999996 677999999995 44433 345689999999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 248 ECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 248 ~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
+|++.|+++||++|+++||||+|++++.++++++. +++|++|||+|++ +. ..++|++++||||+||++|+
T Consensus 232 ~Aa~~Lk~~GAk~V~a~~tH~vfs~~a~~~l~~~~-------i~~vivTnTi~~~-~~-~~~~~~~~isva~liaeaI~ 301 (314)
T COG0462 232 KAAKALKERGAKKVYAAATHGVFSGAALERLEASA-------IDEVIVTDTIPLP-EK-KKIPKVSVISVAPLIAEAIR 301 (314)
T ss_pred HHHHHHHHCCCCeEEEEEEchhhChHHHHHHhcCC-------CCEEEEeCCcccc-cc-cccCceEEEEhHHHHHHHHH
Confidence 99999999999999999999999999999999986 8999999999998 32 45789999999999999985
No 2
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=100.00 E-value=4.5e-79 Score=579.64 Aligned_cols=317 Identities=83% Similarity=1.300 Sum_probs=281.4
Q ss_pred hhcCCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHH
Q 020390 10 KKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIY 89 (327)
Q Consensus 10 ~~~~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~ 89 (327)
++.++++|+||+|++|++||++||+.+++++++++++++|||||++++|+++++|||++|||+||+++|+++||||++++
T Consensus 10 ~~~~~~~~~i~~g~~~~~LA~~ia~~l~g~~l~~~~~~~FpDGE~~v~v~~~~~vrg~~V~ivqs~~~pd~lmELLl~~d 89 (326)
T PLN02297 10 SKKNKKQVHLFYCEETEELARKIAAESDAIELGSINWRKFPDGFPNLFINNAHGIRGQHVAFLASFSSPAVIFEQLSVIY 89 (326)
T ss_pred ccccCCCeEEEECCCCHHHHHHHHHHhCCCceeeeEEEECCCCCEEEEEcCCCCcCCCeEEEECCCCCChHHHHHHHHHH
Confidence 35566889999999999999999999623999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccH
Q 020390 90 ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGI 169 (327)
Q Consensus 90 al~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~ 169 (327)
|||++||++|++|+|||||+||||++++|||++++.+|+||+.++.+++|+|+|++||+|+.+.++||+.|+.++++++.
T Consensus 90 Alr~~ga~~i~~ViPY~~YaRQDr~~~~ge~isak~vA~ll~~~~~~~~g~d~vitvDlH~~~~~~fF~~~~~~l~l~a~ 169 (326)
T PLN02297 90 ALPKLFVASFTLVLPFFPTGTSERVEREGDVATAFTLARILSNIPISRGGPTSLVIFDIHALQERFYFGDNVLPCFESGI 169 (326)
T ss_pred HHHHcCCCEEEEEeeCChhhcCCCCCCCCCCchHHHHHHHHhcccccccCCCEEEEEeCCChHHCCccCCcccchhhccH
Confidence 99999999999999999999999999999999999999999975443368999999999999999999988887655789
Q ss_pred HHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcCCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccChhhHHHH
Q 020390 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIEC 249 (327)
Q Consensus 170 ~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~TG~Tl~~~ 249 (327)
+.+++||.+..+.++++||+||.|+.+|++.++.+.++++++|.|.++........++++||+|+|||||+|||+|+.++
T Consensus 170 ~~l~~~i~~~~~~~~~vvVsPD~Ga~~ra~~~a~~~~~~~~~K~R~g~~~~~~~~~~dv~gr~vlIVDDIidTG~Tl~~a 249 (326)
T PLN02297 170 PLLKKRLQQLPDSDNIVIAFPDDGAWKRFHKQFEHFPMVVCTKVREGDKRIVRIKEGNPAGRHVVIVDDLVQSGGTLIEC 249 (326)
T ss_pred HHHHHHHHhccccCCcEEEecCccHHHHHHHHcCCCCEEEEEeEECCCceEEEecccccCCCeEEEEecccCcHHHHHHH
Confidence 99999997642246789999999999999998877899999999986554444467899999999999999999999999
Q ss_pred HHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhcC
Q 020390 250 QKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQI 327 (327)
Q Consensus 250 ~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~~ 327 (327)
++.|+++||++|+++||||+|+++|.++|.++. +|++..+++|++|||+|++++....++|++++||+++||++|+|
T Consensus 250 a~~L~~~Ga~~V~~~~THglfs~~a~~~l~~~~-~~~~~~i~~iv~TdTip~~~~~~~~~~k~~~isva~llAe~i~~ 326 (326)
T PLN02297 250 QKVLAAHGAAKVSAYVTHGVFPNESWERFTHDN-GGPEAGFAYFWITDSCPQTVKAVRGKAPFEVLSLAGSIADALQI 326 (326)
T ss_pred HHHHHHCCCcEEEEEEECcccChhHHHHHHhcc-cccccCcCEEEEcCCccCChhhcccCCCcEEEEcHHHHHHHhcC
Confidence 999999999999999999999999999999740 00011189999999999976532345899999999999999986
No 3
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.7e-76 Score=561.72 Aligned_cols=297 Identities=25% Similarity=0.339 Sum_probs=268.4
Q ss_pred cCCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHH
Q 020390 12 SQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIY 89 (327)
Q Consensus 12 ~~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~ 89 (327)
.+.+++.||+|++|++||++||+.|| ++++++++++||||| +++++++++||+|||++||+++| |++||||++++
T Consensus 2 ~~~~~~~i~~g~~~~~La~~ia~~lg-~~l~~~~~~~FpdGE--~~v~i~~~v~g~~V~iiqs~~~p~nd~lmeLl~~~~ 78 (319)
T PRK04923 2 QDQRNLLVFSGNANKPLAQSICKELG-VRMGKALVTRFSDGE--VQVEIEESVRRQEVFVIQPTCAPSAENLMELLVLID 78 (319)
T ss_pred CCCCceEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCC--EEEEECCCcCCCeEEEEecCCCCCchHHHHHHHHHH
Confidence 45688999999999999999999996 999999999999998 55566799999999999999865 68999999999
Q ss_pred HhhhcCccceeEeecCCCCCcchhhccC-CCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCccccccccc
Q 020390 90 ALPRLFVASFTLVLPFFPTGSFERMEEE-GDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETG 168 (327)
Q Consensus 90 al~~~~a~~i~~viPY~~YsRqdr~~~~-ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~ 168 (327)
|||++||+||++|+|||||+||||++++ ++|++++.+|+||+. +|+|+|+++|+|+.+.++||++|++++ ++
T Consensus 79 alr~~~a~~i~~ViPYl~YaRQDr~~~~~~~~isak~va~ll~~-----~g~d~vitvD~H~~~~~~~f~~p~~~l--~~ 151 (319)
T PRK04923 79 ALKRASAASVTAVIPYFGYSRQDRRMRSSRVPITAKVAAKMISA-----MGADRVLTVDLHADQIQGFFDVPVDNV--YA 151 (319)
T ss_pred HHHHcCCcEEEEEeeccccccccccccCCCCCccHHHHHHHHHh-----cCCCEEEEEeCChHHHHhhcCCCceee--eC
Confidence 9999999999999999999999999965 679999999999996 489999999999999999999999987 57
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--C-CCeEEEeeeeeCCc-cEEEeecCCCCCCeEEEEeccccChh
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--H-FPTVVCAKVREGDK-RIVRIKEGNPAGCHVVIVDDLVQSGG 244 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~-~~~~~~~K~R~~~~-~~~~~~~~~v~gk~viivDDii~TG~ 244 (327)
.+++++||.+.++.+++++|+||.|+++||+.+++ + .++++++|+|.... .......++++||+|+|||||+|||+
T Consensus 152 ~~~l~~~i~~~~~~~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~~~~~~~~gdv~Gr~viIVDDIidTG~ 231 (319)
T PRK04923 152 SPLLLADIWRAYGTDNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVATVMNIIGDVQGKTCVLVDDLVDTAG 231 (319)
T ss_pred hHHHHHHHHHhcCCCCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCCceEEEecccCCCCCEEEEEecccCchH
Confidence 89999999664345789999999999999999986 3 57889999997643 22233578999999999999999999
Q ss_pred hHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHh
Q 020390 245 TLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADA 324 (327)
Q Consensus 245 Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~ 324 (327)
||.++++.|+++||++|+++||||+|+++|.++|.+++ +++|++|||+|++++. +.++|++++||+++||++
T Consensus 232 Tl~~aa~~Lk~~GA~~V~~~~THgvfs~~a~~~l~~s~-------i~~iv~Tdtip~~~~~-~~~~k~~~isva~lla~~ 303 (319)
T PRK04923 232 TLCAAAAALKQRGALKVVAYITHPVLSGPAVDNINNSQ-------LDELVVTDTIPLSEAA-RACAKIRQLSVAELLAET 303 (319)
T ss_pred HHHHHHHHHHHCCCCEEEEEEECcccCchHHHHHhhCC-------CCEEEEeCCccCchhh-cccCCeEEEEhHHHHHHH
Confidence 99999999999999999999999999999999999887 8999999999997642 457899999999999999
Q ss_pred hc
Q 020390 325 LQ 326 (327)
Q Consensus 325 i~ 326 (327)
|+
T Consensus 304 i~ 305 (319)
T PRK04923 304 IR 305 (319)
T ss_pred HH
Confidence 85
No 4
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=6e-75 Score=555.19 Aligned_cols=295 Identities=26% Similarity=0.375 Sum_probs=267.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHH
Q 020390 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYA 90 (327)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~a 90 (327)
+++++++|+|++|++||++||+.|| ++++++++++||||| +++++.++|||+||||+||+++| |++||||++++|
T Consensus 6 ~~~~~~i~~~~~~~~La~~ia~~lg-~~l~~~~~~~FpdGE--~~v~i~~~vrg~dV~ivqs~~~p~nd~l~eLll~~~a 82 (332)
T PRK00553 6 DKSNHVIFSLSKAKKLVDSICRKLS-MKPGEIVIQKFADGE--TYIRFDESVRNKDVVIFQSTCSPVNDSLMELLIAIDA 82 (332)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCC--EEEEECCCCCCCEEEEEcCCCCCCchHHHHHHHHHHH
Confidence 6789999999999999999999996 999999999999998 55566799999999999999875 689999999999
Q ss_pred hhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHH
Q 020390 91 LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIP 170 (327)
Q Consensus 91 l~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~ 170 (327)
||++||++|++|+|||||+||||++++|||++++.+|+||+. +|+|+|+++|+|+.+.++||++|++++ ++.+
T Consensus 83 lr~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~vA~ll~~-----~g~d~vit~DlH~~~i~~~F~ipv~~l--~a~~ 155 (332)
T PRK00553 83 LKRGSAKSITAILPYYGYARQDRKTAGREPITSKLVADLLTK-----AGVTRVTLTDIHSDQTQGFFDIPVDIL--RTYH 155 (332)
T ss_pred HHHcCCCeEEEEeeccccchhhcccCCCCCccHHHHHHHHHh-----cCCCEEEEEeCChHHHHhhcCCCccee--echH
Confidence 999999999999999999999999999999999999999996 489999999999999999999999987 5789
Q ss_pred HHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccE-EEeecCCCCCCeEEEEeccccChhhHH
Q 020390 171 LLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRI-VRIKEGNPAGCHVVIVDDLVQSGGTLI 247 (327)
Q Consensus 171 ~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~-~~~~~~~v~gk~viivDDii~TG~Tl~ 247 (327)
++++|+.+..+.++++||+||.|+++|++.+++ +.++.+++|+|...... .....++++||+|+|||||+|||+|+.
T Consensus 156 ~~~~~~~~~~~~~~~vvVsPD~gg~~rA~~lA~~lg~~~~vi~K~r~~~~~~~~~~~~gdv~Gk~VIIVDDIi~TG~Tl~ 235 (332)
T PRK00553 156 VFLSRVLELLGKKDLVVVSPDYGGVKRARLIAESLELPLAIIDKRRPKHNVAESINVLGEVKNKNCLIVDDMIDTGGTVI 235 (332)
T ss_pred HHHHHHHHhcCCCCeEEEEECCCcHHHHHHHHHHhCCCEEEEEEecCCcceEeeEEeeccCCCCEEEEEeccccchHHHH
Confidence 999999663345778999999999999999986 67888899998765422 222468999999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcc----cCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHH
Q 020390 248 ECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK----NGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIAD 323 (327)
Q Consensus 248 ~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~----~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~ 323 (327)
++++.|+++||++|+++||||+|+++|.++|.++ + +++|++|||+|+++. ..++|++++|||++||+
T Consensus 236 ~aa~~Lk~~GA~~V~~~atHglf~~~a~~~l~~~~~~~~-------i~~iv~Tntip~~~~--~~~~~~~~vsva~~la~ 306 (332)
T PRK00553 236 AAAKLLKKQKAKKVCVMATHGLFNKNAIQLFDEAFKKKL-------IDKLFVSNSIPQTKF--EKKPQFKVVDLAHLYEE 306 (332)
T ss_pred HHHHHHHHcCCcEEEEEEEeeecCchHHHHHHhccccCC-------CCEEEEeCCccCccc--ccCCCeEEEEhHHHHHH
Confidence 9999999999999999999999999999999765 5 899999999998763 34789999999999999
Q ss_pred hhc
Q 020390 324 ALQ 326 (327)
Q Consensus 324 ~i~ 326 (327)
+|+
T Consensus 307 ~i~ 309 (332)
T PRK00553 307 VLL 309 (332)
T ss_pred HHH
Confidence 984
No 5
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=5.3e-75 Score=553.96 Aligned_cols=294 Identities=28% Similarity=0.383 Sum_probs=266.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHHh
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYAL 91 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~al 91 (327)
.++|.||+|++|++||++||++|| ++++++++++|||||. ++++.++|||+||||+||+++| |++||||++++||
T Consensus 3 ~~~~~i~~~~~~~~la~~ia~~lg-~~l~~~~~~~FpdGE~--~v~i~~~vrg~dV~iv~s~~~~~nd~lmelll~~~al 79 (320)
T PRK02269 3 YSDLKLFALSSNKELAEKVAQEIG-IELGKSSVRQFSDGEI--QVNIEESIRGHHVFILQSTSSPVNDNLMEILIMVDAL 79 (320)
T ss_pred CCCeEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCCE--EEEECCCCCCCEEEEEecCCCCccchHHHHHHHHHHH
Confidence 457999999999999999999996 9999999999999985 5566799999999999999865 6899999999999
Q ss_pred hhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHH
Q 020390 92 PRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL 171 (327)
Q Consensus 92 ~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~ 171 (327)
|++||++|++|+|||||+||||++++|||+++|.+|+||+. +|+|+|+++|+|+.+.++||++|++++ .+.++
T Consensus 80 r~~~a~~i~~V~PYl~YaRQDr~~~~~e~isak~~a~ll~~-----~g~d~vit~D~H~~~~~~~f~~p~~~l--~~~p~ 152 (320)
T PRK02269 80 KRASAESINVVMPYYGYARQDRKARSREPITSKLVANMLEV-----AGVDRLLTVDLHAAQIQGFFDIPVDHL--MGAPL 152 (320)
T ss_pred HHhCCCeEEEEEeccccchhhcccCCCCCchHHHHHHHHhh-----cCCCEEEEECCChHHHhccccCCchhh--hhHHH
Confidence 99999999999999999999999999999999999999996 489999999999999999999999887 68999
Q ss_pred HHHHHhcC-CCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCC---ccEEEeecCCCCCCeEEEEeccccChhh
Q 020390 172 LKQRLHQL-PDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGD---KRIVRIKEGNPAGCHVVIVDDLVQSGGT 245 (327)
Q Consensus 172 la~~l~~~-~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~---~~~~~~~~~~v~gk~viivDDii~TG~T 245 (327)
+++|+.+. ++.++++||+||.|+++||+.+++ +.++.+++|+|... ........++++||+|+|||||+|||+|
T Consensus 153 l~~~i~~~~~~~~~~vvVsPd~G~~~~A~~lA~~lg~~~~~~~k~r~~~~~~~~~~~~~~gdv~Gr~viIVDDIidTG~T 232 (320)
T PRK02269 153 IADYFDRRGLVGDDVVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDKMNTSEVMNIIGNVKGKKCILIDDMIDTAGT 232 (320)
T ss_pred HHHHHHHhCCCCCCcEEEEECccHHHHHHHHHHHhCCCEEEEEecccCCCCceeEEEEeccccCCCEEEEEeeecCcHHH
Confidence 99999764 334678999999999999999986 67888888887632 2222335789999999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhh
Q 020390 246 LIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADAL 325 (327)
Q Consensus 246 l~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i 325 (327)
+.++++.|+++||++|+++||||+|+++|.++|.+++ +++|++|||+|++++ ..++|++++|||++||++|
T Consensus 233 l~~aa~~Lk~~GA~~V~~~~tHglf~~~a~~~l~~~~-------i~~iv~Tdti~~~~~--~~~~k~~~isva~~la~~i 303 (320)
T PRK02269 233 ICHAADALAEAGATEVYASCTHPVLSGPALDNIQKSA-------IEKLVVLDTIYLPEE--RLIDKIEQISIADLLGEAI 303 (320)
T ss_pred HHHHHHHHHHCCCCEEEEEEECcccCchHHHHHHhCC-------CCEEEEeCCCCCccc--cccCCeEEEEhHHHHHHHH
Confidence 9999999999999999999999999999999999987 899999999998764 2478999999999999998
Q ss_pred c
Q 020390 326 Q 326 (327)
Q Consensus 326 ~ 326 (327)
+
T Consensus 304 ~ 304 (320)
T PRK02269 304 I 304 (320)
T ss_pred H
Confidence 5
No 6
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=6.3e-75 Score=566.05 Aligned_cols=293 Identities=26% Similarity=0.331 Sum_probs=266.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHHhh
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALP 92 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~al~ 92 (327)
+++.||+|++|++||++||+.|| ++++++++++||||| ++++++++|||+||||+||+++| |+|||||++++|||
T Consensus 118 ~~m~I~sgs~~~~LA~~IA~~Lg-~~l~~~~~~rFpDGE--~~Vri~e~VrG~dV~IVqS~~~pvNd~LmELLllidAlr 194 (439)
T PTZ00145 118 ENAILFSGSSNPLLSKNIADHLG-TILGRVHLKRFADGE--VSMQFLESIRGKDVYIIQPTCPPVNENLIELLLMISTCR 194 (439)
T ss_pred CCeEEEECCCCHHHHHHHHHHhC-CCceeeEEEECCCCC--EEEEECCCcCCCeEEEEecCCCCCcHHHHHHHHHHHHHH
Confidence 77999999999999999999996 999999999999998 55566799999999999999876 67999999999999
Q ss_pred hcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccC--CcccccccccHH
Q 020390 93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFS--DHVLPLFETGIP 170 (327)
Q Consensus 93 ~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn--~~v~~l~~~~~~ 170 (327)
++||++|++|+|||||+||||++++|||++++.+|+||+. +|+|+|++||+|+.++++||+ +|++++ ++.+
T Consensus 195 ~agAkrItlViPYl~YaRQDR~~~~gepIsak~vA~lL~~-----~G~d~VitvDlHs~~i~~fF~~~iPvdnl--~a~~ 267 (439)
T PTZ00145 195 RASAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEA-----MGVDRVVAIDLHSGQIQGFFGPRVPVDNL--EAQL 267 (439)
T ss_pred HhccCeEEEEeecccchheecccCCCCChhHHHHHHHHHH-----cCCCeEEEEecChHHHHhhcCCCcccccc--cccH
Confidence 9999999999999999999999999999999999999996 489999999999999999996 789887 5789
Q ss_pred HHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--C------CCeEEEeeeeeCCccEE-EeecCCCCCCeEEEEecccc
Q 020390 171 LLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--H------FPTVVCAKVREGDKRIV-RIKEGNPAGCHVVIVDDLVQ 241 (327)
Q Consensus 171 ~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~------~~~~~~~K~R~~~~~~~-~~~~~~v~gk~viivDDii~ 241 (327)
.+++|+.+. +..++++|+||.|+.+|++.+++ + .+++++.|+|.....+. ..+.|+++||+|+|||||+|
T Consensus 268 ~~a~~i~~~-~l~~pVVVsPD~Ga~~RAr~~A~~L~~~~~~~~~~avl~K~R~~~~~v~~~~lvgdV~Gk~vIIVDDIId 346 (439)
T PTZ00145 268 IGLDYFTKK-DLYKPVIVSPDAGGVYRARKFQDGLNHRGISDCGIAMLIKQRTKPNEIEKMDLVGNVYDSDVIIVDDMID 346 (439)
T ss_pred HHHHHHhhc-CCCccEEEccCcchHHHHHHHHHHhccccccCCCEEEEEeecCCCCceEEEeccCCCCCCEEEEEcceeC
Confidence 999999764 35679999999999999998874 2 57889999997765432 33578999999999999999
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHH
Q 020390 242 SGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSI 321 (327)
Q Consensus 242 TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~l 321 (327)
||+|+.++++.|+++||++|+++||||+|+++|.++|.+++ +++|++|||||++++ .+.++|++++|||++|
T Consensus 347 TG~Tl~~aa~~Lk~~GA~~V~~~~THglfs~~A~~rl~~s~-------i~~IvvTdTIp~~~~-~~~~~k~~visVA~ll 418 (439)
T PTZ00145 347 TSGTLCEAAKQLKKHGARRVFAFATHGLFSGPAIERIEASP-------LEEVVVTDTVKSNKN-IDSCKKITKLSVSVLV 418 (439)
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEEEcccCChhHHHHHhcCC-------CCEEEEeCCCcCchh-hcccCCeEEEEhHHHH
Confidence 99999999999999999999999999999999999999987 899999999999764 2457899999999999
Q ss_pred HHhhc
Q 020390 322 ADALQ 326 (327)
Q Consensus 322 a~~i~ 326 (327)
|++|+
T Consensus 419 AeaI~ 423 (439)
T PTZ00145 419 ADAIR 423 (439)
T ss_pred HHHHH
Confidence 99985
No 7
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.4e-74 Score=549.52 Aligned_cols=296 Identities=25% Similarity=0.402 Sum_probs=266.8
Q ss_pred hcCCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHH
Q 020390 11 KSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVI 88 (327)
Q Consensus 11 ~~~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~ 88 (327)
++..+++.||+|++|++||++||+.|| ++++++++++||||| ++++++++|||+||+++||+++| |++||||+++
T Consensus 4 ~~~~~~~~i~~~~~~~~la~~ia~~lg-~~l~~~~~~~FpdGE--~~v~i~~~v~g~dV~ii~s~~~~~nd~l~eLll~~ 80 (323)
T PRK02458 4 RYADKQIKLFSLNSNLEIAEKIAQAAG-VPLGKLSSRQFSDGE--IMINIEESVRGDDIYIIQSTSFPVNDHLWELLIMI 80 (323)
T ss_pred ccCCCCeEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCC--EEEEecCCcCCCeEEEEecCCCCCchHHHHHHHHH
Confidence 356678999999999999999999996 999999999999998 55566799999999999999765 6899999999
Q ss_pred HHhhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCccccccccc
Q 020390 89 YALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETG 168 (327)
Q Consensus 89 ~al~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~ 168 (327)
+|||++||++|++|+|||||+||||++++|||++++.+|+||+. +|+|+|+++|+|+.+.++||++|++++ .+
T Consensus 81 ~alr~~~a~~i~lViPYl~YaRQDr~~~~ge~isak~~a~lL~~-----~g~d~vitvD~H~~~i~~~F~~p~~nl--~~ 153 (323)
T PRK02458 81 DACKRASANTVNVVLPYFGYARQDRIAKPREPITAKLVANMLVK-----AGVDRVLTLDLHAVQVQGFFDIPVDNL--FT 153 (323)
T ss_pred HHHHHcCCceEEEEEeccccchhhcccCCCCCchHHHHHHHHhh-----cCCCeEEEEecCcHHhhccccCCceEE--EE
Confidence 99999999999999999999999999999999999999999996 489999999999999999999999987 58
Q ss_pred HHHHHHHHhcC-CCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccChhh
Q 020390 169 IPLLKQRLHQL-PDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGT 245 (327)
Q Consensus 169 ~~~la~~l~~~-~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~TG~T 245 (327)
.+++++|+.+. ++.++++||+||.|+++||+.+++ +.++.++++.|...........++++||+|+|||||+|||+|
T Consensus 154 ~p~~~~~l~~~~~~~~~~vvV~pd~Ga~~~A~~la~~L~~~~~~~~~~r~~~~~~~~~i~gdV~gk~viIVDDIidTG~T 233 (323)
T PRK02458 154 VPLFAKHYCKKGLSGSDVVVVSPKNSGIKRARSLAEYLDAPIAIIDYAQDDSEREEGYIIGDVAGKKAILIDDILNTGKT 233 (323)
T ss_pred HHHHHHHHHHhCCCCCceEEEEECCChHHHHHHHHHHhCCCEEEEEEecCCCcceeeccccccCCCEEEEEcceeCcHHH
Confidence 89999999764 334778999999999999999986 677877787665433222335789999999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhh
Q 020390 246 LIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADAL 325 (327)
Q Consensus 246 l~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i 325 (327)
+.++++.|+++||++|+++||||+|+++|.++|.+++ +++|++|||+|++.+ .++|++++||+++||++|
T Consensus 234 l~~aa~~Lk~~GA~~V~~~~tHgif~~~a~~~l~~s~-------i~~iv~TdTi~~~~~---~~~k~~~isva~lla~~i 303 (323)
T PRK02458 234 FAEAAKIVEREGATEIYAVASHGLFAGGAAEVLENAP-------IKEILVTDSVATKER---VPKNVTYLSASELIADAI 303 (323)
T ss_pred HHHHHHHHHhCCCCcEEEEEEChhcCchHHHHHhhCC-------CCEEEEECCcCCchh---cCCCcEEEEhHHHHHHHH
Confidence 9999999999999999999999999999999999998 899999999998642 368999999999999998
Q ss_pred c
Q 020390 326 Q 326 (327)
Q Consensus 326 ~ 326 (327)
+
T Consensus 304 ~ 304 (323)
T PRK02458 304 I 304 (323)
T ss_pred H
Confidence 4
No 8
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=1.6e-72 Score=532.82 Aligned_cols=282 Identities=24% Similarity=0.316 Sum_probs=255.0
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHHHhhhc
Q 020390 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRL 94 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~al~~~ 94 (327)
++++|+|++|++||++||+.|| ++++++++++|||||. ++++.++|||+||||+||+++| +++||||++++|||++
T Consensus 2 ~~~i~~~~~~~~la~~ia~~lg-~~~~~~~~~~F~dGE~--~v~i~~~v~g~~V~ivqs~~~~n~~l~elll~~~alr~~ 78 (301)
T PRK07199 2 QPLLLALPGNEAAAGRLAAALG-VEVGRIELHRFPDGES--YVRLDSPVAGRTVVLVCSLDRPDEKLLPLLFAAEAAREL 78 (301)
T ss_pred ceEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCCE--EEEECCCCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHc
Confidence 4789999999999999999996 9999999999999985 4566799999999999999875 6799999999999999
Q ss_pred CccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCc---cccccccCCcccccccccHHH
Q 020390 95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA---LQERFYFSDHVLPLFETGIPL 171 (327)
Q Consensus 95 ~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs---~~~~gffn~~v~~l~~~~~~~ 171 (327)
||++|++|+|||||+||||++++|||+++|.+|+||++ |+|+|+++|+|+ .+.+|||++|++++ +..+.
T Consensus 79 ~a~~i~~ViPY~~YaRqDr~~~~ge~isak~vA~ll~~------~~d~vit~DlH~~~~~~~~~~f~ip~~nl--~~~~~ 150 (301)
T PRK07199 79 GARRVGLVAPYLAYMRQDIAFHPGEAISQRHFARLLSG------SFDRLVTVDPHLHRYPSLSEVYPIPAVVL--SAAPA 150 (301)
T ss_pred CCCeEEEEeecccccccccccCCCCCccHHHHHHHHHh------hcCeEEEEeccchhhHHhcCcccCCcccc--chHHH
Confidence 99999999999999999999999999999999999983 799999999998 57899999999987 57899
Q ss_pred HHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccEE--EeecCCCCCCeEEEEeccccChhhHH
Q 020390 172 LKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRIV--RIKEGNPAGCHVVIVDDLVQSGGTLI 247 (327)
Q Consensus 172 la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~--~~~~~~v~gk~viivDDii~TG~Tl~ 247 (327)
+++||.+. .+++++++||.|+.+|+..++. +.++.+++|.|.+..... ....++++||+|+|||||+|||+|+.
T Consensus 151 la~~l~~~--~~~~vVVsPd~g~~~~a~~la~~l~~~~~~~~K~R~~~~~~~~~~~~~~~v~Gr~vIIVDDIidTG~Tl~ 228 (301)
T PRK07199 151 IAAWIRAH--VPRPLLIGPDEESEQWVAAVAERAGAPHAVLRKTRHGDRDVEISLPDAAPWAGRTPVLVDDIVSTGRTLI 228 (301)
T ss_pred HHHHHHhc--CCCcEEEEeCCChHHHHHHHHHHhCCCEEEEEEEecCCCeEEEEeccCcccCCCEEEEEecccCcHHHHH
Confidence 99999765 4678999999999999999886 677888999997654321 12245789999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 248 ECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 248 ~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
++++.||++||++|+++||||+|+++|.++|.+++ +++|++|||+|++. .++|||++||++|+
T Consensus 229 ~aa~~Lk~~GA~~V~~~~tHgvfs~~a~~~l~~~~-------i~~iv~Tdti~~~~---------~~~sva~lla~~i~ 291 (301)
T PRK07199 229 EAARQLRAAGAASPDCVVVHALFAGDAYSALAAAG-------IARVVSTDTVPHPS---------NAISLAPLLAEALR 291 (301)
T ss_pred HHHHHHHHCCCcEEEEEEEeeeCChHHHHHHHhCC-------CCEEEEeCCccCCC---------CEEehHHHHHHHHH
Confidence 99999999999999999999999999999999987 89999999999853 26999999999985
No 9
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=6.2e-72 Score=533.65 Aligned_cols=296 Identities=26% Similarity=0.391 Sum_probs=268.4
Q ss_pred hcCCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHH
Q 020390 11 KSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVI 88 (327)
Q Consensus 11 ~~~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~ 88 (327)
.+..++|+||+|++|++||++||++|| ++++++++++|||||. ++++.++|||+||||+||+++| |++||||+++
T Consensus 16 ~~~~~~~~i~~g~~~~~la~~ia~~lg-~~l~~~~~~~FpDGE~--~v~i~~~vrg~~V~ivqs~~~p~nd~l~eLll~~ 92 (330)
T PRK02812 16 LSDNNRLRLFSGSSNPALAQEVARYLG-MDLGPMIRKRFADGEL--YVQIQESIRGCDVYLIQPTCAPVNDHLMELLIMV 92 (330)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHhC-CCceeeEEEECCCCCE--EEEeCCCCCCCEEEEECCCCCCccHHHHHHHHHH
Confidence 456788999999999999999999996 9999999999999984 5566799999999999999765 6899999999
Q ss_pred HHhhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCccccccccc
Q 020390 89 YALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETG 168 (327)
Q Consensus 89 ~al~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~ 168 (327)
+|||++||++|++|+|||||+||||++++|||+++|.+|+||+. +|+|+|+++|+|+.+.++||++|++++ ++
T Consensus 93 ~alr~~ga~ri~~ViPYl~YaRQDr~~~~~e~isak~vA~lL~~-----~g~d~vitvDlH~~~~~~fF~ipv~nl--~~ 165 (330)
T PRK02812 93 DACRRASARQITAVIPYYGYARADRKTAGRESITAKLVANLITK-----AGADRVLAMDLHSAQIQGYFDIPCDHV--YG 165 (330)
T ss_pred HHHHHhCCceEEEEEecccccccccccCCCCCchHHHHHHHHHh-----cCCCEEEEEECCchHHcCccCCCceee--eC
Confidence 99999999999999999999999999999999999999999996 489999999999999999999999877 68
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcC---CCeEEEeeeeeCCccE-EEeecCCCCCCeEEEEeccccChh
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDH---FPTVVCAKVREGDKRI-VRIKEGNPAGCHVVIVDDLVQSGG 244 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~---~~~~~~~K~R~~~~~~-~~~~~~~v~gk~viivDDii~TG~ 244 (327)
.+.+++||.+. +.+++++|+||.|+.+|++.+++. .++.+++|+|...... .....++++||+|+||||+++||+
T Consensus 166 ~~~l~~~i~~~-~~~~~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~~~~~~~~~~~v~g~~viiVDDii~TG~ 244 (330)
T PRK02812 166 SPVLLDYLASK-NLEDIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHNVAEVLNVIGDVKGKTAILVDDMIDTGG 244 (330)
T ss_pred hHHHHHHHHhc-CCCCeEEEEECCccHHHHHHHHHHhCCCCEEEEEeeccCCceeeeEeccccCCCCEEEEEccccCcHH
Confidence 99999999764 357899999999999999998863 5788899998765422 223467899999999999999999
Q ss_pred hHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHh
Q 020390 245 TLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADA 324 (327)
Q Consensus 245 Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~ 324 (327)
|+.++++.|+++||++|++++|||+|++++.++|.+++ +++|++|||+|++.. ..+++++++||+++||++
T Consensus 245 T~~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~-------id~iv~tnti~~~~~--~~~~~~~~~~va~lla~~ 315 (330)
T PRK02812 245 TICEGARLLRKEGAKQVYACATHAVFSPPAIERLSSGL-------FEEVIVTNTIPVPEE--RRFPQLKVLSVANMLGEA 315 (330)
T ss_pred HHHHHHHHHhccCCCeEEEEEEcccCChHHHHHHhhCC-------CCEEEEeCCCCChhh--cccCCceEEEHHHHHHHH
Confidence 99999999999999999999999999999999999876 899999999998653 357899999999999999
Q ss_pred hc
Q 020390 325 LQ 326 (327)
Q Consensus 325 i~ 326 (327)
|+
T Consensus 316 i~ 317 (330)
T PRK02812 316 IW 317 (330)
T ss_pred HH
Confidence 85
No 10
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.7e-71 Score=525.13 Aligned_cols=280 Identities=26% Similarity=0.409 Sum_probs=254.6
Q ss_pred HHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHHhhhcCccceeEeecC
Q 020390 28 LARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRLFVASFTLVLPF 105 (327)
Q Consensus 28 la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~al~~~~a~~i~~viPY 105 (327)
||++||+.|| ++++++++++||||| +++++.++|||+||||+||+++| +++||||++++|||++||++|++|+||
T Consensus 1 la~~ia~~l~-~~l~~~~~~~F~DGE--~~vri~~~v~g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~~a~~i~~ViPY 77 (304)
T PRK03092 1 LAEEVAKELG-VEVTPTTAYDFANGE--IYVRFEESVRGCDAFVLQSHTAPINKWLMEQLIMIDALKRASAKRITVVLPF 77 (304)
T ss_pred CHHHHHHHhC-CceeeeEEEECCCCC--EEEEECCCCCCCEEEEEeCCCCCCcHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 6899999996 999999999999998 55566799999999999999876 689999999999999999999999999
Q ss_pred CCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHHHHHhcCCCCCCc
Q 020390 106 FPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNI 185 (327)
Q Consensus 106 ~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la~~l~~~~~~~~~ 185 (327)
|||+||||++++|||++++.+|+||+. +|+|+|+++|+|+.+.++||++|++++ ++.+.+++||.+.+..+++
T Consensus 78 l~YaRQDr~~~~~e~isak~va~lL~~-----~g~d~vitvD~H~~~~~~~f~~p~~~l--~~~~~la~~i~~~~~~~~~ 150 (304)
T PRK03092 78 YPYARQDKKHRGREPISARLVADLFKT-----AGADRIMTVDLHTAQIQGFFDGPVDHL--FAMPLLADYVRDKYDLDNV 150 (304)
T ss_pred ccccccccccCCCCCccHHHHHHHHHh-----cCCCeEEEEecChHHHHhhcCCCeeeE--echHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999996 489999999999999999999999987 6899999999765456789
Q ss_pred EEEecCCChhHhHHhhhc--C-CCeEEEeeeeeCC--ccE-EEeecCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCC
Q 020390 186 VIAFPDDGAWKRFHKMLD--H-FPTVVCAKVREGD--KRI-VRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAA 259 (327)
Q Consensus 186 viV~pd~G~~~ra~~~a~--~-~~~~~~~K~R~~~--~~~-~~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~ 259 (327)
++|+||.|+++|++.+++ + .++.+++|.|+.. +.. .....++++||+|+|||||++||+|+.++++.|+++||+
T Consensus 151 vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~~~~~~~~~~~~dv~gr~viIVDDIi~TG~Tl~~aa~~Lk~~Ga~ 230 (304)
T PRK03092 151 TVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPTVPNQVVANRVVGDVEGRTCVLVDDMIDTGGTIAGAVRALKEAGAK 230 (304)
T ss_pred EEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccCCCCceEEEecCcCCCCCEEEEEccccCcHHHHHHHHHHHHhcCCC
Confidence 999999999999999885 4 6788899999643 222 233478999999999999999999999999999999999
Q ss_pred eEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 260 KVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 260 ~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
+|+++||||+|++++.++|.+++ +++|++|||+|++.+ ..++|++++|++++||++|+
T Consensus 231 ~I~~~~tH~v~~~~a~~~l~~~~-------~~~i~~t~tip~~~~--~~~~~~~~~sva~~la~~i~ 288 (304)
T PRK03092 231 DVIIAATHGVLSGPAAERLKNCG-------AREVVVTDTLPIPEE--KRFDKLTVLSIAPLLARAIR 288 (304)
T ss_pred eEEEEEEcccCChHHHHHHHHCC-------CCEEEEeeeeccchh--hcCCCeEEEEhHHHHHHHHH
Confidence 99999999999999999999987 899999999999765 24789999999999999985
No 11
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.6e-70 Score=519.70 Aligned_cols=291 Identities=29% Similarity=0.387 Sum_probs=264.5
Q ss_pred EEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHHhhhc
Q 020390 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRL 94 (327)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~al~~~ 94 (327)
|+||+|++|++||++||+.|| .+++++++++|||||. ++++.++++|+||+|+||+++| |++||||++++|||++
T Consensus 1 ~~i~~~~~~~~la~~ia~~lg-~~~~~~~~~~FpdGE~--~vri~~~v~g~~V~ii~s~~~~~nd~l~eLll~~~alr~~ 77 (309)
T PRK01259 1 MKLFAGNANPELAEKIAKYLG-IPLGKASVGRFSDGEI--SVEINENVRGKDVFIIQSTCAPTNDNLMELLIMIDALKRA 77 (309)
T ss_pred CEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCCE--EEEeCCCCCCCEEEEECCCCCCCcHHHHHHHHHHHHHHHc
Confidence 579999999999999999996 9999999999999984 5566799999999999999765 6899999999999999
Q ss_pred CccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHHH
Q 020390 95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQ 174 (327)
Q Consensus 95 ~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la~ 174 (327)
|+++|++|+||||||||||++++|||++++.+|+||+. +|+|+|+++|+|+.+.++||++|++++ .+.+++++
T Consensus 78 ga~~i~lViPYl~YsRQDr~~~~ge~isak~~a~lL~~-----~g~d~vitvD~H~~~~~~~f~~p~~~l--~~~~~l~~ 150 (309)
T PRK01259 78 SAGRITAVIPYFGYARQDRKARSRVPITAKLVANLLET-----AGADRVLTMDLHADQIQGFFDIPVDNL--YGSPILLE 150 (309)
T ss_pred CCceEEEEeeccccchhhhhhccCCCchHHHHHHHHhh-----cCCCEEEEEcCChHHHcCcCCCCceee--eecHHHHH
Confidence 99999999999999999999999999999999999996 489999999999999999999999887 58899999
Q ss_pred HHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccE-EEeecCCCCCCeEEEEeccccChhhHHHHHH
Q 020390 175 RLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRI-VRIKEGNPAGCHVVIVDDLVQSGGTLIECQK 251 (327)
Q Consensus 175 ~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~-~~~~~~~v~gk~viivDDii~TG~Tl~~~~~ 251 (327)
|+.+. +.++++|++||.||+.|+..++. +.++.+++|.|...... .....++++||+|+|||||++||+|+.++++
T Consensus 151 ~i~~~-~~~~~vvv~pd~Gg~~~A~~la~~Lg~~~~~~~k~r~~~~~~~~~~~~~~~~g~~vliVDDii~TG~T~~~a~~ 229 (309)
T PRK01259 151 DIKQK-NLENLVVVSPDVGGVVRARALAKRLDADLAIIDKRRPRANVSEVMNIIGDVEGRDCILVDDMIDTAGTLCKAAE 229 (309)
T ss_pred HHHhc-CCCCcEEEEECCCcHHHHHHHHHHhCCCEEEEEeecccceeEEEEeecccCCCCEEEEEecccCcHHHHHHHHH
Confidence 99765 45789999999999999999886 67888888888665422 2234678999999999999999999999999
Q ss_pred HHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 252 VLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 252 ~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
.|+++||++|+++||||+|++++.++|.+++ +++|++|||+|++.+ .+.++|++++||+++||++|+
T Consensus 230 ~l~~~Ga~~v~~~~tH~i~~~~a~~~l~~~~-------~~~iv~t~ti~~~~~-~~~~~k~~~isva~~ia~~i~ 296 (309)
T PRK01259 230 ALKERGAKSVYAYATHPVLSGGAIERIENSV-------IDELVVTDSIPLSEE-AKKCDKIRVLSVAPLLAEAIR 296 (309)
T ss_pred HHHccCCCEEEEEEEeeeCChHHHHHHhcCC-------CCEEEEecCcccchh-hccCCCeEEEEcHHHHHHHHH
Confidence 9999999999999999999999999999886 899999999999765 345789999999999999985
No 12
>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-71 Score=504.32 Aligned_cols=293 Identities=28% Similarity=0.445 Sum_probs=266.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHHhh
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALP 92 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~al~ 92 (327)
+++++|+|++|++||++||++|| ++++++.+++|+|||+ .|++.++|||+|||++||.+.| |+|||||+|++||+
T Consensus 2 ~~i~lf~g~shp~La~~I~~~lg-i~l~~v~~kkf~nge~--~v~i~esvR~~dV~iiqsgsg~ind~lmELLI~I~ac~ 78 (316)
T KOG1448|consen 2 KNIKLFSGDSHPELAERIAARLG-IELGKVNLKKFSNGET--SVQIGESVRGEDVYIIQSGSGPINDNLMELLIMINACK 78 (316)
T ss_pred CceEEEcCCCCHHHHHHHHHHhC-CCcceeeeEEccCCcE--EEecccccccCcEEEeccCCCcchHHHHHHHHHHHhcc
Confidence 57899999999999999999997 9999999999999985 5566799999999999999998 89999999999999
Q ss_pred hcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHH
Q 020390 93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL 172 (327)
Q Consensus 93 ~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~l 172 (327)
++++++||+|+|||||+||||+.+.+.+++||++|+||.. +|+|++|++|+|..|.+|||++||+|++ ..+.+
T Consensus 79 ~asa~~vTaViP~Fpyarq~~k~~~r~~i~aklVanlls~-----aG~dhvItmDlHa~Q~qgfF~ipVdnly--~~p~~ 151 (316)
T KOG1448|consen 79 RASASRVTAVIPYFPYARQDKKDKSRAPILAKLVANLLSS-----AGADHVITMDLHASQIQGFFDIPVDNLY--AEPAV 151 (316)
T ss_pred hhhhheeEEeccCCccccchhhhhhhhhHHHHHHHhhhhc-----cCCceEEEecccchhhCceeeccchhhc--cchHH
Confidence 9999999999999999999999988999999999999996 5899999999999999999999999985 78889
Q ss_pred HHHHhcC-CCCCCcEEEecCCChhHhHHhhhcCCC--eEEEeeeeeCCc--cEEEeecCCCCCCeEEEEeccccChhhHH
Q 020390 173 KQRLHQL-PDANNIVIAFPDDGAWKRFHKMLDHFP--TVVCAKVREGDK--RIVRIKEGNPAGCHVVIVDDLVQSGGTLI 247 (327)
Q Consensus 173 a~~l~~~-~~~~~~viV~pd~G~~~ra~~~a~~~~--~~~~~K~R~~~~--~~~~~~~~~v~gk~viivDDii~TG~Tl~ 247 (327)
.+|++.. .++++.++|+||.||++|++.+++.++ ++.++|.|.... .....+.||++||.++|||||++|++|+.
T Consensus 152 l~~ir~~~~~~~~~vivSPdaGgaKR~~s~ad~l~~~fali~ker~k~~~v~~~m~LVGDv~gkvailVDDm~dt~GTl~ 231 (316)
T KOG1448|consen 152 LNYIRENIPDSENAVIVSPDAGGAKRVTSLADRLNLDFALIHKERRKANEVDIRMVLVGDVKGKVAILVDDMADTCGTLI 231 (316)
T ss_pred HHHHHhhCCCccceEEECCCcchhhhhHHHHHhhcchhhhhhhhhhcccccceEEEEEeccCCcEEEEecccccccchHH
Confidence 9999874 467889999999999999999998655 444566665543 22455799999999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 248 ECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 248 ~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
++++.|.+.||++|++++|||+|++++++++.++. ++++++|||+|.+.+.. .||+.+||+++.+||+|+
T Consensus 232 ~aa~~L~~~GA~kV~a~~THgVfs~~a~er~~~s~-------~~~~vvtnt~p~~~~~~--~~~~~~Idvs~~~ae~ir 301 (316)
T KOG1448|consen 232 KAADKLLEHGAKKVYAIVTHGVFSGPAIERLNESA-------LDRVVVTNTIPIDDSCL--EPKLTTIDVSPVLAEAIR 301 (316)
T ss_pred HHHHHHHhcCCceEEEEEcceeccccHHHHhhhcc-------cceEEEEEeeccccccc--CCcccEEeeccccchheE
Confidence 99999999999999999999999999999999985 79999999999977532 379999999999999986
No 13
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.1e-69 Score=508.71 Aligned_cols=280 Identities=23% Similarity=0.290 Sum_probs=253.6
Q ss_pred EEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHHHhhhcCc
Q 020390 18 HLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFV 96 (327)
Q Consensus 18 ~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~al~~~~a 96 (327)
++|+|++|++||++||+.|| ++++++++++|||||.++ +++++|||++||++|+++++ |++||||++++|||++|+
T Consensus 1 ~i~~~~~~~~la~~ia~~l~-~~~~~~~~~~FpdGE~~v--~i~~~v~g~~v~i~~~~~~~~d~l~ell~~~~alr~~ga 77 (285)
T PRK00934 1 MIIGGSASQLLASEVARLLN-TELALVETKRFPDGELYV--RILGEIDGEDVVIISTTYPQDENLVELLLLIDALRDEGA 77 (285)
T ss_pred CeEeCCCCHHHHHHHHHHHC-CceEeeEEEECCCCCEEE--EECCCcCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 47999999999999999996 999999999999998555 55699999999999998776 459999999999999999
Q ss_pred cceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHHHHH
Q 020390 97 ASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRL 176 (327)
Q Consensus 97 ~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la~~l 176 (327)
++|++|+|||||+||||++++|||+++|.+|+||+.+ | |+|+++|+|+.+.++||++|++++ ++.+.++++|
T Consensus 78 ~~i~~v~PY~~YaRqDr~~~~ge~isak~~a~ll~~~-----~-d~vitvD~H~~~~~~~f~~~~~~l--~a~~~la~~i 149 (285)
T PRK00934 78 KSITLVIPYLGYARQDKRFKPGEPISARAIAKIISAY-----Y-DRIITINIHEPSILEFFPIPFINL--DAAPLIAEYI 149 (285)
T ss_pred CeEEEEecCCcccccccccCCCCCccHHHHHHHHHHh-----c-CEEEEEcCChHHHcCcCCCcEeEe--ecHHHHHHHH
Confidence 9999999999999999999999999999999999963 6 999999999999999999999877 5889999999
Q ss_pred hcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccE-EEeecCCCCCCeEEEEeccccChhhHHHHHHHH
Q 020390 177 HQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRI-VRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVL 253 (327)
Q Consensus 177 ~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~-~~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L 253 (327)
.+. .+++++++||.|+.+|+..+++ +.++.+++|.|...... .....++++||+|+|||||+|||+|+.++++.|
T Consensus 150 ~~~--~~~~vvv~pd~Ga~~~a~~lA~~l~~~~~~i~k~r~~~~~~~~~~~~~~v~Gk~VlIVDDIi~TG~Tl~~aa~~L 227 (285)
T PRK00934 150 GDK--LDDPLVLAPDKGALELAKEAAEILGCEYDYLEKTRISPTEVEIAPKNLDVKGKDVLIVDDIISTGGTMATAIKIL 227 (285)
T ss_pred Hhc--CCCCEEEEeCCchHHHHHHHHHHhCCCEEEEEEEecCCCeEEEeccccccCCCEEEEEcCccccHHHHHHHHHHH
Confidence 653 4578999999999999999886 67788889988765432 222346899999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 254 AAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 254 ~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
+++||++|+++|+|++|++++.++|.+++ +++|++|||+|+ ++.++||+++||++|+
T Consensus 228 k~~GA~~V~~~~~H~i~~~~a~~~l~~~~-------i~~i~~tnti~~---------~~~~~~va~~la~~i~ 284 (285)
T PRK00934 228 KEQGAKKVYVACVHPVLVGDAILKLYNAG-------VDEIIVTDTLES---------EVSKISVAPLIADLLK 284 (285)
T ss_pred HHCCCCEEEEEEEeeccCcHHHHHHHhCC-------CCEEEEcCCCCC---------CceEEEcHHHHHHHHh
Confidence 99999999999999999999999999997 899999999985 4678999999999986
No 14
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=2.8e-69 Score=522.37 Aligned_cols=297 Identities=21% Similarity=0.244 Sum_probs=258.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHc---------------C----Cce--eeeeeEeecCCCceeEEEeeCCCCCCceEEEE
Q 020390 14 KKQVHLFYCVECEELARKVAAQS---------------D----LIT--LQSINWRNFADGWPNLYINSAHDIRGQHVAFL 72 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l---------------~----~~~--~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~ii 72 (327)
.++|.||+|++|++||++||+.| | +++ ++++++++||||| ++++++++|||+||||+
T Consensus 6 ~~~~~i~~~~~~~~la~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~FpDGE--~~vri~~~Vrg~dV~iv 83 (382)
T PRK06827 6 VGSLGIIALPSCRELADKVDEHLVRIRERKENENIESLAFKGYSRESYLIPAKFIRFSNGE--AKGEILESVRGKDIYIL 83 (382)
T ss_pred CCceEEEECCCCHHHHHHHHHHHHHhhhhccccccccccccccCCcceeeeeEEEECCCCC--EEEEECCCCCCCeEEEE
Confidence 46799999999999999999999 3 344 9999999999998 45566799999999999
Q ss_pred EecC---------------C-chhHHHHHHHHHHhhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCC
Q 020390 73 ASFS---------------S-PGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTS 136 (327)
Q Consensus 73 qs~~---------------~-~~~l~elll~~~al~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~ 136 (327)
||++ + +|++||||++++||| +||++|++|+|||||+||||+ ++|||++++.+|+||+.
T Consensus 84 qs~~~~~v~~~~~~~~~~~p~nd~lmeLll~idalr-agA~rIt~ViPY~~YaRQDr~-~~~e~itak~vA~lL~~---- 157 (382)
T PRK06827 84 QDVGNYSVTYNMFGEKNHMSPDDHFQDLKRTIDAIR-GKARRITVIMPFLYESRQHKR-KGRESLDCALALQELEE---- 157 (382)
T ss_pred ecCCcccccccccccccCCCCcHHHHHHHHHHHHHh-cCCCeEEEEeecccccccccc-cCCCCccHHHHHHHHHH----
Confidence 9986 3 378999999999999 999999999999999999999 78999999999999996
Q ss_pred CCCCCEEEEEeCCccccccccC-CcccccccccHHHHHHHHhcCC-----CCCCcEEEecCCChhHhHHhhhc--CCCeE
Q 020390 137 RGGPTSLVIYDIHALQERFYFS-DHVLPLFETGIPLLKQRLHQLP-----DANNIVIAFPDDGAWKRFHKMLD--HFPTV 208 (327)
Q Consensus 137 ~~g~d~vi~vdlHs~~~~gffn-~~v~~l~~~~~~~la~~l~~~~-----~~~~~viV~pd~G~~~ra~~~a~--~~~~~ 208 (327)
+|+|+|+++|+|+.+.+|||+ .|++++ ++.+.+++|+.+.. +.++++||+||.||++||+.++. +.+++
T Consensus 158 -~G~d~vitvDlHs~~i~~~F~~~pvdnl--~a~~~l~~~i~~~i~~l~~d~~~~VVVsPD~Gg~~rA~~~A~~Lg~~~a 234 (382)
T PRK06827 158 -LGVDNIITFDAHDPRIENAIPLMGFENL--YPSYQIIKALLKNEKDLEIDKDHLMVISPDTGAMDRAKYYASVLGVDLG 234 (382)
T ss_pred -cCCCeEEEecCChHHhcccCCCCCcCCc--CchHHHHHHHHHhcccccccCCCcEEEEECccchHHHHHHHHHhCCCEE
Confidence 489999999999999999998 478887 57888999996531 22678999999999999999886 67889
Q ss_pred EEeeeeeCCc------cEE-EeecC-CCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhc
Q 020390 209 VCAKVREGDK------RIV-RIKEG-NPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTL 280 (327)
Q Consensus 209 ~~~K~R~~~~------~~~-~~~~~-~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~ 280 (327)
+++|+|.... .+. ....+ +++||+|+|||||++||+|+.++++.|+++||++|+++||||+|+ +|.++|.+
T Consensus 235 i~~K~R~~~~~~~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~Tl~~aa~~Lk~~GA~~V~~~~tH~vf~-~a~~~l~~ 313 (382)
T PRK06827 235 LFYKRRDYSRVVNGRNPIVAHEFLGRDVEGKDVLIVDDMIASGGSMIDAAKELKSRGAKKIIVAATFGFFT-NGLEKFDK 313 (382)
T ss_pred EEEcccCCcccccCCCceEEEecCCcccCCCEEEEEeCCcCcHHHHHHHHHHHHHcCCCEEEEEEEeecCh-HHHHHHHh
Confidence 9999996432 111 22356 899999999999999999999999999999999999999999999 99999986
Q ss_pred ccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 281 KNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 281 ~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
+..+| .+++|++|||+|++++. ..++|++++|||++||++|+
T Consensus 314 ~~~~g---~i~~iv~TdTi~~~~~~-~~~~~~~~isva~llA~~I~ 355 (382)
T PRK06827 314 AYEEG---YFDRIIGTNLVYHPEEL-LSKPWYIEVDMSKLIARIID 355 (382)
T ss_pred hcccC---CCCEEEEeCCCcCchhh-cccCCeEEEEcHHHHHHHHH
Confidence 52111 18999999999997642 24689999999999999985
No 15
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=100.00 E-value=6.4e-68 Score=501.61 Aligned_cols=282 Identities=24% Similarity=0.370 Sum_probs=254.0
Q ss_pred HHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHHhhhcCccceeEee
Q 020390 26 EELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRLFVASFTLVL 103 (327)
Q Consensus 26 ~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~al~~~~a~~i~~vi 103 (327)
++||++||+.|| ++++++++++|||||.++ ++.++|||+||||+||+++| |++||||++++|||++|+++|++|+
T Consensus 1 ~~lA~~ia~~lg-~~l~~~~~~~FpdGE~~v--~i~~~v~g~~V~iv~s~~~p~nd~l~eLl~~~~a~r~~~a~~i~~Vi 77 (302)
T PLN02369 1 PALSQEIACYLG-LELGKITIKRFADGEIYV--QLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKRITAVI 77 (302)
T ss_pred ChHHHHHHHHhC-CceeeeEEEECCCCCEEE--EECCCCCCCeEEEEecCCCCcchHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 369999999996 999999999999998555 56799999999999999865 6899999999999999999999999
Q ss_pred cCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHHHHHhcC-CCC
Q 020390 104 PFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQL-PDA 182 (327)
Q Consensus 104 PY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la~~l~~~-~~~ 182 (327)
|||||+||||++++|||+++|.+|+||+. +|+|+|+++|+|+.+.++||++|++++ ++.+.+++||.+. ...
T Consensus 78 PYl~YsRQDr~~~~~e~isak~va~lL~~-----~g~d~vi~vDlHs~~i~~~F~ip~~~l--~~~~~~~~~i~~~~~~~ 150 (302)
T PLN02369 78 PYFGYARADRKTQGRESIAAKLVANLITE-----AGADRVLACDLHSGQSMGYFDIPVDHV--YGQPVILDYLASKTISS 150 (302)
T ss_pred ecccccccccccCCCCCchHHHHHHHHHh-----cCCCEEEEEECCchHHhhccCCceecc--cchHHHHHHHHHhCCCC
Confidence 99999999999999999999999999996 489999999999999999999999987 5889999999764 223
Q ss_pred CCcEEEecCCChhHhHHhhhc---CCCeEEEeeeeeCCccE-EEeecCCCCCCeEEEEeccccChhhHHHHHHHHHHcCC
Q 020390 183 NNIVIAFPDDGAWKRFHKMLD---HFPTVVCAKVREGDKRI-VRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGA 258 (327)
Q Consensus 183 ~~~viV~pd~G~~~ra~~~a~---~~~~~~~~K~R~~~~~~-~~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA 258 (327)
+++++++||.|+++|+..+++ +.++.++.|+|.+.... .....++++||+|+|||||++||+|+.++++.|++.||
T Consensus 151 ~~~vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~~~~~~~~~~v~g~~viivDDii~TG~Tl~~a~~~l~~~Ga 230 (302)
T PLN02369 151 PDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAEVMNLIGDVKGKVAIMVDDMIDTAGTITKGAALLHQEGA 230 (302)
T ss_pred CceEEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcceeeeEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHhCCC
Confidence 678999999999999998874 46788899999765422 22357889999999999999999999999999999999
Q ss_pred CeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 259 AKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 259 ~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
++|++++||++|++++.++|.+++ +++|++|||+|++.. ..++|++++||+++||++|+
T Consensus 231 ~~v~~~~tH~v~~~~a~~~l~~~~-------~~~iv~t~ti~~~~~--~~~~~~~~~~v~~~la~~i~ 289 (302)
T PLN02369 231 REVYACATHAVFSPPAIERLSSGL-------FQEVIVTNTIPVSEK--NYFPQLTVLSVANLLGETIW 289 (302)
T ss_pred CEEEEEEEeeeeCHHHHHHHHhCC-------CCEEEEeCCCCChhh--cccCCceEEEHHHHHHHHHH
Confidence 999999999999999999999986 899999999998654 34789999999999999985
No 16
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=100.00 E-value=9.9e-67 Score=495.65 Aligned_cols=288 Identities=30% Similarity=0.446 Sum_probs=261.6
Q ss_pred EEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEE-EecCCc--hhHHHHHHHHHHhhh
Q 020390 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFL-ASFSSP--GVIFEQISVIYALPR 93 (327)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~ii-qs~~~~--~~l~elll~~~al~~ 93 (327)
|.+|+|++|++||++||+.|| .+++++++++||||| +++++.++++|+||||+ ||+++| +++|||+++++|||+
T Consensus 1 ~~i~~~~~~~~la~~ia~~lg-~~~~~~~~~~FpdGE--~~v~i~~~v~g~~v~iv~~s~~~~~~~~l~el~~~~~a~r~ 77 (308)
T TIGR01251 1 MKIFSGSSNQELAQKVAKNLG-LPLGDVEVKRFPDGE--LYVRINESVRGKDVFIIQQSTSAPVNDNLMELLIMIDALKR 77 (308)
T ss_pred CEEEECCCCHHHHHHHHHHhC-CeeeeeEEEECCCCC--EEEEECCCCCCCeEEEEeCCCCCCccHHHHHHHHHHHHHHH
Confidence 578999999999999999996 999999999999998 45566799999999999 999754 689999999999999
Q ss_pred cCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHH
Q 020390 94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK 173 (327)
Q Consensus 94 ~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la 173 (327)
+|+++|++|+|||||+||||++++|||++++.+|+||++ +|+|+++++|+|+.+.++||++|++++ ++.+.++
T Consensus 78 ~ga~~i~~v~PYl~Y~RqDr~~~~ge~is~~~~a~ll~~-----~g~d~vit~DlHs~~~~~~f~ip~~~l--~a~~~l~ 150 (308)
T TIGR01251 78 ASAKSITAVIPYYGYARQDKKFKSREPISAKLVANLLET-----AGADRVLTVDLHSPQIQGFFDVPVDNL--YASPVLA 150 (308)
T ss_pred cCCCeEEEEEEecccchhccccCCCCCchHHHHHHHHHH-----cCCCEEEEecCChHHhcCcCCCceecc--cCHHHHH
Confidence 999999999999999999999999999999999999996 489999999999999999999999876 5889999
Q ss_pred HHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeee-CCccE-EEeecCCCCCCeEEEEeccccChhhHHHH
Q 020390 174 QRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVRE-GDKRI-VRIKEGNPAGCHVVIVDDLVQSGGTLIEC 249 (327)
Q Consensus 174 ~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~-~~~~~-~~~~~~~v~gk~viivDDii~TG~Tl~~~ 249 (327)
+|+.+.. .+++++++||.|+.+|+..+++ +.++.+++|.|. ..... .....++++||+|+||||+++||+|+..+
T Consensus 151 ~~i~~~~-~~~~viv~pd~g~~~~A~~lA~~Lg~~~~~i~k~r~~~~~~~~~~~~~~~v~g~~vliVDDii~tG~Tl~~a 229 (308)
T TIGR01251 151 EYLKKKI-LDNPVVVSPDAGGVERAKKVADALGCPLAIIDKRRISATNEVEVMNLVGDVEGKDVVIVDDIIDTGGTIAKA 229 (308)
T ss_pred HHHHhhC-CCCCEEEEECCchHHHHHHHHHHhCCCEEEEEEEecCCCCEEEEEecccccCCCEEEEEccccCCHHHHHHH
Confidence 9998752 4678999999999999999986 678888999997 33322 22346789999999999999999999999
Q ss_pred HHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 250 QKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 250 ~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
++.|+++||++|+++++|++|++++.++|.+++ +++|++|||+|+. +.++|+..+|++++||++|+
T Consensus 230 ~~~l~~~ga~~v~~~~th~v~~~~a~~~l~~~~-------~~~iv~tdt~~~~----~~~~~~~~v~va~~la~~i~ 295 (308)
T TIGR01251 230 AEILKSAGAKRVIAAATHGVFSGPAIERIANAG-------VEEVIVTNTIPHE----KHKPKVSVISVAPLIAEAIR 295 (308)
T ss_pred HHHHHhcCCCEEEEEEEeeecCcHHHHHHHhCC-------CCEEEEeCCCCcc----ccCCCcEEEEhHHHHHHHHH
Confidence 999999999999999999999999999999987 7999999999985 24789999999999999984
No 17
>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism]
Probab=100.00 E-value=3.7e-57 Score=402.46 Aligned_cols=295 Identities=21% Similarity=0.289 Sum_probs=262.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHH
Q 020390 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYA 90 (327)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~a 90 (327)
.+.++.+|+|+|+++||+.|+++|| +++++..+.+-+|+|+. |++.++|||+||||+|+.+.+ +++||||+|+.|
T Consensus 5 a~sg~vl~s~ns~~elak~vaerlg-i~~g~~~vy~~tnret~--vei~~svrgkdvfiiqt~skdvn~~vmellim~ya 81 (354)
T KOG1503|consen 5 ASSGMVLFSGNSHPELAKMVAERLG-IELGKATVYQKTNRETR--VEIKESVRGKDVFIIQTGSKDVNNDVMELLIMAYA 81 (354)
T ss_pred ccCCeEEEcCCCCHHHHHHHHHHhc-ccccceEEEecCCCceE--EEhhhhccCceEEEEEecCcccchHHHHHHHHHHH
Confidence 4689999999999999999999996 99999999999999855 566799999999999999875 689999999999
Q ss_pred hhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHH
Q 020390 91 LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIP 170 (327)
Q Consensus 91 l~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~ 170 (327)
|+.+++++|+.|+||||||+|.+..+ +..+..|++|.|++. +|..++|++|||...++|||++|++|+ .++|
T Consensus 82 ckts~aksiigvipy~pyskqckmrk-rgsiv~klla~mmck-----aglthlitmdlhqkeiqgff~~pvdnl--rasp 153 (354)
T KOG1503|consen 82 CKTSCAKSIIGVIPYLPYSKQCKMRK-RGSIVSKLLASMMCK-----AGLTHLITMDLHQKEIQGFFSIPVDNL--RASP 153 (354)
T ss_pred HhhhhhhceEEEeecCccchhhhhhh-cccHHHHHHHHHHHh-----cccceEEeehhhhHhhcceeccccccc--ccCH
Confidence 99999999999999999999998876 667889999999994 688999999999999999999999998 5889
Q ss_pred HHHHHHhcC-CCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeee-----------eCC--c-c------------EE
Q 020390 171 LLKQRLHQL-PDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVR-----------EGD--K-R------------IV 221 (327)
Q Consensus 171 ~la~~l~~~-~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R-----------~~~--~-~------------~~ 221 (327)
.|.+||.+. .++++.+||+-..|..++|..+++ .+++++++.+. +.. . . +.
T Consensus 154 fllqyiqe~ipdyrnavivaksp~~akka~syaerlrlglavihge~k~~e~d~~dgr~spp~~~~~t~~~~~~lp~~~~ 233 (354)
T KOG1503|consen 154 FLLQYIQEEIPDYRNAVIVAKSPGVAKKAQSYAERLRLGLAVIHGEQKDTESDLVDGRHSPPPVVTATTHPSLELPAQIS 233 (354)
T ss_pred HHHHHHHHhCccccceEEEecCcchhhHHHhHHHHHhhceeEeeccccccccccccCCcCCCCccccccCccccCchhhc
Confidence 999999874 568899999999999999999886 34566665332 111 0 0 00
Q ss_pred E-----eecCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEe
Q 020390 222 R-----IKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWIT 296 (327)
Q Consensus 222 ~-----~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~T 296 (327)
. ...||+.||-.++|||+++.-.++..+++.||+.||-+|++.+|||+++.+|..+|++|+ +++|+||
T Consensus 234 k~kppltvvgdvggriaimvddiiddvqsfvaaae~lkergaykiyv~athgllssdapr~lees~-------idevvvt 306 (354)
T KOG1503|consen 234 KEKPPLTVVGDVGGRIAIMVDDIIDDVQSFVAAAEVLKERGAYKIYVMATHGLLSSDAPRLLEESP-------IDEVVVT 306 (354)
T ss_pred ccCCCeEEEeccCceEEEEehhhHHhHHHHHHHHHHHHhcCceEEEEEeecccccccchhhhhcCC-------CceEEEe
Confidence 0 246899999999999999999999999999999999999999999999999999999997 8999999
Q ss_pred cCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 297 DSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 297 nti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
||+|+..++ .+|+|++.+|++-+|+|+||
T Consensus 307 ntvphevqk-lqc~kiktvdislii~eair 335 (354)
T KOG1503|consen 307 NTVPHEVQK-LQCHKIKTVDISLIISEAIR 335 (354)
T ss_pred cCCcHHHHh-hcCCccceeehhhHHHHHHH
Confidence 999998754 57999999999999999986
No 18
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=100.00 E-value=1.5e-36 Score=249.26 Aligned_cols=113 Identities=27% Similarity=0.447 Sum_probs=94.9
Q ss_pred EEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc--hhHHHHHHHHHHhhhc
Q 020390 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRL 94 (327)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~--~~l~elll~~~al~~~ 94 (327)
|+||+|+++++||++||+.|| .+++++++++|||||.+ +++.+++||+||||+||+++| |++||||++++|||++
T Consensus 1 m~I~~g~~~~~La~~ia~~L~-~~~~~~~~~~F~dGE~~--v~i~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~ 77 (116)
T PF13793_consen 1 MVIFSGSSSQDLAERIAEALG-IPLGKVETKRFPDGETY--VRIPESVRGKDVFIIQSTSPPVNDNLMELLLLIDALRRA 77 (116)
T ss_dssp EEEEESSSGHHHHHHHHHHTT-S-EE-EEEEE-TTS-EE--EEESS--TTSEEEEE---SSSHHHHHHHHHHHHHHHHHT
T ss_pred CEEEECCCCHHHHHHHHHHhC-CceeeeEEEEcCCCCEE--EEecccccCCceEEEEecCCchhHHHHHHHHHHHHHHHc
Confidence 689999999999999999996 99999999999999855 555799999999999999987 7899999999999999
Q ss_pred CccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcC
Q 020390 95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNI 133 (327)
Q Consensus 95 ~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~ 133 (327)
||++|++|+|||||+||||+ ++|||++++.+|+||+.+
T Consensus 78 ~a~~i~~ViPYl~YaRQDr~-~~ge~isak~~a~lL~~~ 115 (116)
T PF13793_consen 78 GAKRITLVIPYLPYARQDRR-KPGEPISAKVVAKLLSAA 115 (116)
T ss_dssp TBSEEEEEESS-TTTTSSSS-STTC--HHHHHHHHHHHH
T ss_pred CCcEEEEeccchhhhhhccC-CCCCcchHHHHHHHHHhc
Confidence 99999999999999999999 899999999999999863
No 19
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=100.00 E-value=9.8e-33 Score=241.09 Aligned_cols=137 Identities=30% Similarity=0.407 Sum_probs=105.5
Q ss_pred CCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCC-------------c---------cE---------EEeecCCC
Q 020390 182 ANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGD-------------K---------RI---------VRIKEGNP 228 (327)
Q Consensus 182 ~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~-------------~---------~~---------~~~~~~~v 228 (327)
+++.|||+|+.|+.+||..+++ ++++++++++|... . .. ...+.||+
T Consensus 2 y~naVIVa~~~g~akRAts~Ad~L~l~~avih~e~~~~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~~~e~~~~~vVGDV 81 (184)
T PF14572_consen 2 YRNAVIVAKDPGGAKRATSFADRLRLGFAVIHGERRDSESDGVDGRHSPPMSRSAAVSSSEEIPEMTPKEKPPMNVVGDV 81 (184)
T ss_dssp GGGEEEEESSGGGHHHHHHHHHHCT-EEEEE------------------------------------------EEEES--
T ss_pred CCCCEEEeCCCCchHhHHHHHHHhCCCeeEecCccccccccccccccCCCccccccccccchhhhcccCcccceEEEEEc
Confidence 5689999999999999999996 56778888776310 0 00 01357999
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcC
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIAN 308 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~ 308 (327)
+||+|+|||||++||+|+.++++.||++||++|++++|||+|+++|.++|+++. |++||||||||++.+. .+
T Consensus 82 ~gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA~~V~~~aTHgvfs~~A~~~l~~s~-------Id~vvvTnTIp~~~~~-~~ 153 (184)
T PF14572_consen 82 KGKICIIVDDIIDTGGTLIKAAELLKERGAKKVYACATHGVFSGDAPERLEESP-------IDEVVVTNTIPQEEQK-LQ 153 (184)
T ss_dssp TTSEEEEEEEEESSTHHHHHHHHHHHHTTESEEEEEEEEE---TTHHHHHHHSS-------ESEEEEETTS--HHHH-HH
T ss_pred cCCeEeeecccccchHHHHHHHHHHHHcCCCEEEEEEeCcccCchHHHHHhhcC-------CeEEEEeccccCchhh-hc
Confidence 999999999999999999999999999999999999999999999999999996 8999999999997643 46
Q ss_pred CCCeEEEechHHHHHhhc
Q 020390 309 KAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 309 ~~k~~v~~va~~la~~i~ 326 (327)
++|++++||+++|||+|+
T Consensus 154 ~~Ki~vldis~llaeaI~ 171 (184)
T PF14572_consen 154 CPKIKVLDISPLLAEAIR 171 (184)
T ss_dssp -TTEEEE--HHHHHHHHH
T ss_pred CCCEeEeehHHHHHHHHH
Confidence 899999999999999985
No 20
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=99.69 E-value=4.3e-16 Score=136.37 Aligned_cols=150 Identities=15% Similarity=0.092 Sum_probs=111.1
Q ss_pred HHHHHHHhcCCCCCCCCCEEEEEeCCcccccccc-CCcccccccccHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhh
Q 020390 124 FTMARILSNIPTSRGGPTSLVIYDIHALQERFYF-SDHVLPLFETGIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKML 202 (327)
Q Consensus 124 k~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gff-n~~v~~l~~~~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a 202 (327)
..++++|.. .|++++..+++||.+.++|| |.+....+......+++.+.+. .+.++|++|+.||+++|..++
T Consensus 3 ~~~~~~l~~-----~ga~~~g~f~L~SG~~s~~y~d~~~l~~~p~~~~~l~~~l~~~--~~~d~Vvg~~~gGi~~A~~~a 75 (170)
T PRK13811 3 NTIAELLIS-----YKAIEFGDFTLASGAKSRYYIDIKTAITHPALLKEIAAEVAKR--YDFDVVAGVAVGGVPLAVAVS 75 (170)
T ss_pred HHHHHHHHH-----CCCEEECCEEEccCCcCCEEEeCchhccCHHHHHHHHHHHHhh--CCCCEEEecCcCcHHHHHHHH
Confidence 456788875 47899999999999998887 5432111111233455555433 345689999999999999887
Q ss_pred c--CCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhc
Q 020390 203 D--HFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTL 280 (327)
Q Consensus 203 ~--~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~ 280 (327)
. +.|+.+++|+++..... ....++++|++|+||||+++||+|+..+++.|+++||+-+.++|.-..- .++.+++++
T Consensus 76 ~~l~~p~~~~rK~~k~~g~~-~~~~g~~~g~~VlIVDDvi~TG~T~~~~~~~l~~~Ga~v~~~~~~vdr~-~g~~~~l~~ 153 (170)
T PRK13811 76 LAAGKPYAIIRKEAKDHGKA-GLIIGDVKGKRVLLVEDVTTSGGSALYGIEQLRAAGAVVDDVVTVVDRE-QGAEELLAE 153 (170)
T ss_pred HHHCCCEEEEecCCCCCCCc-ceEEcccCCCEEEEEEecccccHHHHHHHHHHHHCCCeEEEEEEEEECC-ccHHHHHHh
Confidence 5 77888888876543321 2235678999999999999999999999999999999998888865543 356777776
Q ss_pred cc
Q 020390 281 KN 282 (327)
Q Consensus 281 ~~ 282 (327)
.|
T Consensus 154 ~g 155 (170)
T PRK13811 154 LG 155 (170)
T ss_pred cC
Confidence 65
No 21
>PRK11595 DNA utilization protein GntX; Provisional
Probab=99.57 E-value=2.3e-15 Score=137.64 Aligned_cols=155 Identities=23% Similarity=0.195 Sum_probs=107.1
Q ss_pred ccceeEeecCCCCCcch-hhccC-CCcccHHHHHHHHhcCC------CCCCCCCEEEEEeCCccc--cccccCCcccccc
Q 020390 96 VASFTLVLPFFPTGSFE-RMEEE-GDVATAFTMARILSNIP------TSRGGPTSLVIYDIHALQ--ERFYFSDHVLPLF 165 (327)
Q Consensus 96 a~~i~~viPY~~YsRqd-r~~~~-ge~isak~ia~lL~~~~------~~~~g~d~vi~vdlHs~~--~~gffn~~v~~l~ 165 (327)
+.+..++.+|-+..|+- ..+|. |+.-.++.++++|.... .....+|.|++||+|..+ .||| |
T Consensus 61 ~~~~~a~~~Y~g~~r~lI~~~Ky~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~d~ivpVPl~~~r~~~RGf-n------- 132 (227)
T PRK11595 61 WQRLVFVSDYAPPLSGLIHQLKFSRRSELASVLARLLLLEWLQARRSTGLQKPDRIISVPLHQRRHWRRGF-N------- 132 (227)
T ss_pred hhheeeeeecccHHHHHHHHHHHCccHHHHHHHHHHHHHHHHHHhhhhcccCCCeEEecCCCHHHHHHCCC-C-------
Confidence 45677888999888866 33332 67777788888774210 011257899999999874 5897 3
Q ss_pred cccHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcCCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccChhh
Q 020390 166 ETGIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGT 245 (327)
Q Consensus 166 ~~~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~TG~T 245 (327)
|++++|+.+.+..+. + ++.+.+.|.+....+... ..++|..+........++++|++|+|||||+|||.|
T Consensus 133 --q~~~la~~la~~~~~--~----~~~~~l~r~~~~~~q~~l--~~~~R~~n~~~~f~~~~~~~~~~vllvDDv~tTG~T 202 (227)
T PRK11595 133 --QSDLLCRPLARWLGC--D----YDSEALTRTRATATQHFL--SARLRKRNLKNAFRLELPVQGQHMAIVDDVVTTGST 202 (227)
T ss_pred --HHHHHHHHHHHHHCC--C----CcccceEEecCCCCcccC--CHHHHhhhhhhhhccCCCCCCCEEEEEeeeecchHH
Confidence 788999998775322 1 344455555544433221 134555543211223567899999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEEEee
Q 020390 246 LIECQKVLAAHGAAKVSAYVTHG 268 (327)
Q Consensus 246 l~~~~~~L~~~GA~~v~~~~tH~ 268 (327)
+.++++.|++.|+++|++++...
T Consensus 203 l~~~~~~L~~~g~~~V~~~~la~ 225 (227)
T PRK11595 203 VAEIAQLLLRNGAASVQVWCLCR 225 (227)
T ss_pred HHHHHHHHHHcCCcEEEEEEEEe
Confidence 99999999999999999998643
No 22
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=99.54 E-value=5e-14 Score=140.44 Aligned_cols=144 Identities=14% Similarity=0.194 Sum_probs=105.0
Q ss_pred HHHHHHhcCCC-CCCcEEEecCCChhHhHHhhhc--CCCe--EEEeeeeeC-----Cc------cE-EEe-ecC-CCCCC
Q 020390 171 LLKQRLHQLPD-ANNIVIAFPDDGAWKRFHKMLD--HFPT--VVCAKVREG-----DK------RI-VRI-KEG-NPAGC 231 (327)
Q Consensus 171 ~la~~l~~~~~-~~~~viV~pd~G~~~ra~~~a~--~~~~--~~~~K~R~~-----~~------~~-~~~-~~~-~v~gk 231 (327)
.+++.|.+... ..+.++..||. +..+|..++. +.|+ .+++|.+.+ .. .. +.. ... .++||
T Consensus 263 ~~G~~La~~~~~~~d~Vv~vPd~-g~~~A~~~A~~lgip~~~~l~rk~~~~r~~i~~~qr~rn~~~~~~~~~~~~~v~gK 341 (445)
T PRK08525 263 KMGEELAKKFPIKADFVVPVPDS-GVPAAIGYAQESGIPFEMAIVRNHYVGRTFIEPTQEMRNLKVKLKLNPMSKVLEGK 341 (445)
T ss_pred HHHHHHHHHhcccCCeEEECCch-HHHHHHHHHHHhCCCccceEEEeeccccccCCHHHHHHhhheeEEecccccccCCC
Confidence 34444544321 23467888885 5888888875 5554 455554322 11 01 211 123 48999
Q ss_pred eEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCC
Q 020390 232 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAP 311 (327)
Q Consensus 232 ~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k 311 (327)
+|+||||+++||+|+.++++.|+++||++|+++++|++|..++...|..++ ++++++||.-..+-...-..+-
T Consensus 342 ~VlLVDDvitTG~Tl~~a~~~Lr~aGA~~V~v~~~hp~~~~~~~~~i~~~~-------~~~li~~~~~~~ei~~~~~ads 414 (445)
T PRK08525 342 RIVVIDDSIVRGTTSKKIVSLLRAAGAKEIHLRIACPEIKFPCYYGIDTPT-------FEELISANKSVEEVRKYIGADS 414 (445)
T ss_pred eEEEEecccCcHHHHHHHHHHHHhcCCCEEEEEEECCCcCCchhhhCcCCC-------hhhEEEcCCCHHHHHHHhCCCe
Confidence 999999999999999999999999999999999999999999999999886 8999999985432222334678
Q ss_pred eEEEechHHHH
Q 020390 312 FEVLSLAGSIA 322 (327)
Q Consensus 312 ~~v~~va~~la 322 (327)
+..+|+..+..
T Consensus 415 l~~ls~~~l~~ 425 (445)
T PRK08525 415 LSFLSIDELTR 425 (445)
T ss_pred EeccCHHHHHH
Confidence 89999988765
No 23
>PLN02293 adenine phosphoribosyltransferase
Probab=99.50 E-value=4.7e-13 Score=118.84 Aligned_cols=111 Identities=20% Similarity=0.185 Sum_probs=88.9
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccE-------------EEeecCCC-CCCe
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRI-------------VRIKEGNP-AGCH 232 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~-------------~~~~~~~v-~gk~ 232 (327)
.+.+++++.+ .+.++|++|+.+|+.++..++. +.++++++|.|+..... .....+.+ +|++
T Consensus 51 ~~~l~~~~~~---~~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~rK~~k~~~~~~~~~~~~~~g~~~l~l~~~~i~~G~r 127 (187)
T PLN02293 51 IDLFVERYRD---MGISVVAGIEARGFIFGPPIALAIGAKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHVGAVEPGER 127 (187)
T ss_pred HHHHHHHHhh---cCCCEEEEeCCCchHHHHHHHHHHCCCEEEEEecCCCCCceEEEEEeccCCceEEEEEcCccCCCCE
Confidence 4555665543 2457899999999999998875 67888888877532111 11123556 7999
Q ss_pred EEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhccc
Q 020390 233 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 233 viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
|+||||+++||+|+.++++.|+++|+..+.++|+|.+...++.++|.+.+
T Consensus 128 VlIVDDvitTG~T~~~~~~~l~~~Ga~~v~~~~~~~~~~~~g~~~l~~~~ 177 (187)
T PLN02293 128 ALVIDDLIATGGTLCAAINLLERAGAEVVECACVIELPELKGREKLNGKP 177 (187)
T ss_pred EEEEeccccchHHHHHHHHHHHHCCCEEEEEEEEEEcCCccHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999998765
No 24
>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only]
Probab=99.48 E-value=8.7e-14 Score=126.98 Aligned_cols=151 Identities=21% Similarity=0.191 Sum_probs=105.0
Q ss_pred ccceeEeecCCCCCcch-hhcc-CCCcccHHHHHHHHhcCCCC-CCCCCEEEEEeCCccc--cccccCCcccccccccHH
Q 020390 96 VASFTLVLPFFPTGSFE-RMEE-EGDVATAFTMARILSNIPTS-RGGPTSLVIYDIHALQ--ERFYFSDHVLPLFETGIP 170 (327)
Q Consensus 96 a~~i~~viPY~~YsRqd-r~~~-~ge~isak~ia~lL~~~~~~-~~g~d~vi~vdlHs~~--~~gffn~~v~~l~~~~~~ 170 (327)
+.+...+..|-+..|+- .++| .|+..-++.+|++|...... ...+|.|++||+|..+ .||| +|++
T Consensus 65 ~~~~~~~~~Y~~~l~~~i~~~Kf~~~~~l~~~la~~l~~~~~~~~~~~~~iVpVPls~~r~~~RGF----------NQ~~ 134 (225)
T COG1040 65 FERLRSLGSYNGPLRELISQLKFQGDLDLAKLLARLLAKALDDFLEKPDLIVPVPLSPSRLLERGF----------NQSE 134 (225)
T ss_pred ceeEEEEEEccHHHHHHHHHhhhCCchhHHHHHHHHHHHHHhhccccCCeEEEecCCHHHHHHcCC----------CHHH
Confidence 45678888999888865 3333 27778888888887643211 2347899999999775 5898 3899
Q ss_pred HHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcCCCeEEEeeeeeCCc-cEEEeecCCCCC-CeEEEEeccccChhhHHH
Q 020390 171 LLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPTVVCAKVREGDK-RIVRIKEGNPAG-CHVVIVDDLVQSGGTLIE 248 (327)
Q Consensus 171 ~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~~~~~~~~K~R~~~~-~~~~~~~~~v~g-k~viivDDii~TG~Tl~~ 248 (327)
.|++.+...++ .+. ...|.+....+... ..++|..+. ..+. +.+..+. |+|+|||||+|||.|+.+
T Consensus 135 ~la~~l~~~~~--~~~-------~~~r~k~~~~q~~l--~~~~rr~nl~~aF~-~~~~~~~~~~vlLvDDV~TTGaTl~~ 202 (225)
T COG1040 135 LLARALARRLG--KPI-------ALRRVKDTSPQQGL--KALERRRNLKGAFR-LKKGIEEPKNVLLVDDVYTTGATLKE 202 (225)
T ss_pred HHHHHHHHHhC--chH-------HHHHHhcccccccc--chHHHHHhccCCee-cCCCCCCCCeEEEEecccccHHHHHH
Confidence 99999987642 221 34444444322221 134444443 2232 3444444 999999999999999999
Q ss_pred HHHHHHHcCCCeEEEEEEee
Q 020390 249 CQKVLAAHGAAKVSAYVTHG 268 (327)
Q Consensus 249 ~~~~L~~~GA~~v~~~~tH~ 268 (327)
+++.|++.||++|+++++..
T Consensus 203 ~~~~L~~~Ga~~v~~~~lar 222 (225)
T COG1040 203 AAKLLREAGAKRVFVLTLAR 222 (225)
T ss_pred HHHHHHHcCCceEEEEEEEe
Confidence 99999999999999998754
No 25
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=99.43 E-value=2.5e-12 Score=113.23 Aligned_cols=112 Identities=19% Similarity=0.190 Sum_probs=85.8
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCC-CCCeEEEEeccccChh
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNP-AGCHVVIVDDLVQSGG 244 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v-~gk~viivDDii~TG~ 244 (327)
..+.+++++.+.+. +.++|++|+.||+++|..++. +.|+.+.+|+++..... ....+.+ +|++|+||||+++||+
T Consensus 44 ~~~~i~~~l~~~i~-~~d~ivg~~~ggi~lA~~lA~~l~~p~~~~rk~~k~yg~~-~~~~g~~~~g~~VlIVDDvitTG~ 121 (176)
T PRK13812 44 CLRLIAEAFADRID-EDTKLAGVALGAVPLVAVTSVETGVPYVIARKQAKEYGTG-NRIEGRLDEGEEVVVLEDIATTGQ 121 (176)
T ss_pred HHHHHHHHHHHHhc-cCCEEEEeecchHHHHHHHHHHHCCCEEEEeccCCcCCCC-CeEEecCCCcCEEEEEEEeeCCCH
Confidence 35667777766532 237999999999999998875 67888899887654311 1124555 8999999999999999
Q ss_pred hHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhccc
Q 020390 245 TLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 245 Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
|+.++++.|+++||+.+.++|.--.- .++.+++++.|
T Consensus 122 Tl~~~~~~l~~~Ga~vv~~~vlvdr~-~~~~~~l~~~g 158 (176)
T PRK13812 122 SAVDAVEALREAGATVNRVLVVVDRE-EGARENLADHD 158 (176)
T ss_pred HHHHHHHHHHHCCCeEEEEEEEEECC-cchHHHHHhcC
Confidence 99999999999999999888854432 35567777765
No 26
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=99.43 E-value=9.4e-13 Score=114.83 Aligned_cols=101 Identities=19% Similarity=0.227 Sum_probs=75.5
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcCC--C--eEEEeee--e----eCCc-cEEEeecCCCCCCeEEEE
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHF--P--TVVCAKV--R----EGDK-RIVRIKEGNPAGCHVVIV 236 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~~--~--~~~~~K~--R----~~~~-~~~~~~~~~v~gk~viiv 236 (327)
....+|+.|.+.+..+++++++|+.||+.+|+.+++.+ + +.++.-. | ..+. ........+++||+|+||
T Consensus 11 ~i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~l~~~L~~~~~v~~i~~~~Y~~~~~~~~~~~~~~~~~~~~~gk~vliv 90 (166)
T TIGR01203 11 RIAELAKQITEDYAGKPLVLLCVLKGSFPFFADLIRYIAVPVQVDFMAVSSYGNGMQSSGDVKILKDLDLSIKGKDVLIV 90 (166)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHhcCCCceeeEEEEeeccCCCcccCceEEecCCCCCCCCCEEEEE
Confidence 46678888876544567899999999999999988643 3 2223222 2 1111 111223567899999999
Q ss_pred eccccChhhHHHHHHHHHHcCCCeEEEEEEee
Q 020390 237 DDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 268 (327)
Q Consensus 237 DDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~ 268 (327)
|||++||+|+.++++.|++.||++|+++|.+.
T Consensus 91 DDii~TG~Tl~~~~~~l~~~g~~~i~~~~l~~ 122 (166)
T TIGR01203 91 EDIVDTGLTLQYLLDLLKARKPKSLKIVTLLD 122 (166)
T ss_pred eeeeCcHHHHHHHHHHHHHCCCCEEEEEEEEe
Confidence 99999999999999999999999999999553
No 27
>TIGR00201 comF comF family protein. This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.
Probab=99.42 E-value=1.6e-13 Score=122.10 Aligned_cols=147 Identities=22% Similarity=0.173 Sum_probs=94.8
Q ss_pred eEeecCCCCCcch-hhccC-CCcccHHHHHHHHhcCC-C-CCCCCCEEEEEeCCcc--ccccccCCcccccccccHHHHH
Q 020390 100 TLVLPFFPTGSFE-RMEEE-GDVATAFTMARILSNIP-T-SRGGPTSLVIYDIHAL--QERFYFSDHVLPLFETGIPLLK 173 (327)
Q Consensus 100 ~~viPY~~YsRqd-r~~~~-ge~isak~ia~lL~~~~-~-~~~g~d~vi~vdlHs~--~~~gffn~~v~~l~~~~~~~la 173 (327)
.++..|-+..|+- .++|. |+.-.++.++++|.... . ....+|.|++||+|.. +.||| | |+.+||
T Consensus 36 ~~~~~Y~~~~~~li~~~K~~~~~~l~~~l~~~l~~~~~~~~~~~~~~ivpVP~~~~r~~~RGf-n---------q~~~la 105 (190)
T TIGR00201 36 VSVYTYNEPLKELISRFKFRGQAEIIRALASLLSLTVSKAYRDLPDVIVPVPLSKEREWRRGF-N---------QADLLA 105 (190)
T ss_pred EEEEECchHHHHHHHHhccCCChHHHHHHHHHHHHHHHhhccCCCCEEEeCCCCHHHHHHhCC-C---------HHHHHH
Confidence 5566787777755 33433 66667777888775311 0 0123589999999987 45898 3 788999
Q ss_pred HHHhcCCCCCCcEEEecCCChhHhHHhhhcCCCeEEEeeeeeCCc-cEEEeecCCCCCCeEEEEeccccChhhHHHHHHH
Q 020390 174 QRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPTVVCAKVREGDK-RIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKV 252 (327)
Q Consensus 174 ~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~~~~~~~~K~R~~~~-~~~~~~~~~v~gk~viivDDii~TG~Tl~~~~~~ 252 (327)
+.+.+.... ....+.|.+. ..+... ..++|..+. ..+.....+++||+|+|||||+|||.|+.++++.
T Consensus 106 ~~l~~~~~~--------~~~~l~r~~~-~~Q~~l--~~~~R~~n~~~~f~~~~~~~~~~~vllvDDV~TTGaTl~~~~~~ 174 (190)
T TIGR00201 106 QCLSRWLFN--------YHNIVIRLNN-ETQSKL--KATLRFLNLENAFDLKNNSFQGRNIVLVDDVVTTGATLHEIARL 174 (190)
T ss_pred HHHHHHhCC--------CcceEEEecc-cccccC--CHHHHHHHHhCcEEccCCCCCCCEEEEEeeeeccHHHHHHHHHH
Confidence 998764211 0112222222 111111 133444332 2233222258899999999999999999999999
Q ss_pred HHHcCCCeEEEEEEe
Q 020390 253 LAAHGAAKVSAYVTH 267 (327)
Q Consensus 253 L~~~GA~~v~~~~tH 267 (327)
|+++||.+|++++..
T Consensus 175 L~~~Ga~~V~~~~la 189 (190)
T TIGR00201 175 LLELGAASVQVWTLA 189 (190)
T ss_pred HHHcCCCEEEEEEEE
Confidence 999999999999853
No 28
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=99.40 E-value=2.2e-12 Score=111.57 Aligned_cols=104 Identities=18% Similarity=0.250 Sum_probs=84.7
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcC----CCeEEEeeeeeCCc-------cEEEeecCCCCCCeEEEE
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDH----FPTVVCAKVREGDK-------RIVRIKEGNPAGCHVVIV 236 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~----~~~~~~~K~R~~~~-------~~~~~~~~~v~gk~viiv 236 (327)
....+|++|.+.+..+++++++..+|++.++.++... +.+.+++-.++++. ++...+..+++||+|+||
T Consensus 20 ri~ela~~I~~~y~g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kDld~di~grdVLiV 99 (178)
T COG0634 20 RIKELAAQITEDYGGKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKDLDEDIKGRDVLIV 99 (178)
T ss_pred HHHHHHHHHHHhhCCCceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecccccCCCCCeEEEE
Confidence 4677999998877778899999999999999988753 33566666666542 123345678999999999
Q ss_pred eccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCCh
Q 020390 237 DDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGS 274 (327)
Q Consensus 237 DDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a 274 (327)
|||++||.||..+.+.|+.+||+++..++ ++.++.
T Consensus 100 eDIiDsG~TLs~i~~~l~~r~a~sv~i~t---LldK~~ 134 (178)
T COG0634 100 EDIIDSGLTLSKVRDLLKERGAKSVRIAT---LLDKPE 134 (178)
T ss_pred ecccccChhHHHHHHHHHhCCCCeEEEEE---EeeCcc
Confidence 99999999999999999999999999998 555553
No 29
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=99.39 E-value=3e-12 Score=113.22 Aligned_cols=100 Identities=21% Similarity=0.226 Sum_probs=77.4
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCe--EEEeeeeeCCc----cEE--EeecCCCCCCeEEEEe
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPT--VVCAKVREGDK----RIV--RIKEGNPAGCHVVIVD 237 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~--~~~~K~R~~~~----~~~--~~~~~~v~gk~viivD 237 (327)
....+|++|.+.+..+++++++++.||+.+|+.++. +.++ .+..+.|.... ... .....+++||+|+|||
T Consensus 25 ~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~gk~VLIVD 104 (181)
T PRK09162 25 AIDRMADEITADLADENPLVLCVMGGGLVFTGQLLPRLDFPLEFDYLHATRYRNETTGGELVWKVKPRESLKGRTVLVVD 104 (181)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHHcCCCcccCEEEEEecCCCccCCceeEecCCCCCCCCCEEEEEc
Confidence 467788888775445668999999999999999886 3332 34555555332 111 1124578999999999
Q ss_pred ccccChhhHHHHHHHHHHcCCCeEEEEEEe
Q 020390 238 DLVQSGGTLIECQKVLAAHGAAKVSAYVTH 267 (327)
Q Consensus 238 Dii~TG~Tl~~~~~~L~~~GA~~v~~~~tH 267 (327)
||+|||.|+.++++.|++.||++|++++.+
T Consensus 105 DIidTG~Tl~~~~~~Lk~~Ga~~V~~avL~ 134 (181)
T PRK09162 105 DILDEGHTLAAIRDRCLEMGAAEVYSAVLV 134 (181)
T ss_pred cccCcHHHHHHHHHHHHhCCCCEEEEEEEE
Confidence 999999999999999999999999999855
No 30
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=99.35 E-value=7.8e-12 Score=110.24 Aligned_cols=104 Identities=16% Similarity=0.262 Sum_probs=79.6
Q ss_pred cHHHHHHHHhcCCC--CCCcEEEecCCChhHhHHhhhcC--CC--eEEEeeeeeCCc-----cE--EEeecCCCCCCeEE
Q 020390 168 GIPLLKQRLHQLPD--ANNIVIAFPDDGAWKRFHKMLDH--FP--TVVCAKVREGDK-----RI--VRIKEGNPAGCHVV 234 (327)
Q Consensus 168 ~~~~la~~l~~~~~--~~~~viV~pd~G~~~ra~~~a~~--~~--~~~~~K~R~~~~-----~~--~~~~~~~v~gk~vi 234 (327)
....+|.+|.+.+. ..++++++++.||+.+|+.+++. .+ +.+++..|+++. .+ ......+++||+|+
T Consensus 17 ~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~~~L~~~~~v~~l~~ssY~~~~~~~~~v~i~~~~~~~v~gk~VL 96 (178)
T PRK15423 17 RIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVL 96 (178)
T ss_pred HHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHHHHhCCCcceeEEEEEEecCCCcccCceEEecCCCCCCCCCEEE
Confidence 46678888877543 23589999999999999998863 33 446677776421 11 11234579999999
Q ss_pred EEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCCh
Q 020390 235 IVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGS 274 (327)
Q Consensus 235 ivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a 274 (327)
|||||++||.||.++.+.|++.||++|.+++ ++.++.
T Consensus 97 lVDDIiDTG~TL~~l~~~l~~~~~~~v~~av---L~~K~~ 133 (178)
T PRK15423 97 IVEDIIDSGNTLSKVREILSLREPKSLAICT---LLDKPS 133 (178)
T ss_pred EEeeecCchHHHHHHHHHHHhCCCCEEEEEE---EEECCC
Confidence 9999999999999999999999999999998 445543
No 31
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=99.33 E-value=8.9e-12 Score=102.35 Aligned_cols=99 Identities=24% Similarity=0.263 Sum_probs=72.8
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeee----------eeCCcc--EEEeecCCCCCCeE
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKV----------REGDKR--IVRIKEGNPAGCHV 233 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~----------R~~~~~--~~~~~~~~v~gk~v 233 (327)
....++++|.+. ..+.+.++++..||+..+..++. +.++.+..+. +..... ........++||+|
T Consensus 13 ~~~~la~~i~~~-~~~~~~ivgi~~~G~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~v 91 (125)
T PF00156_consen 13 LAERLAEQIKES-GFDFDVIVGIPRGGIPLAAALARALGIPLVFVRKRKSYYPGSDKTSREKNNQELFIIDKEDIKGKRV 91 (125)
T ss_dssp HHHHHHHHHHHH-TTTSSEEEEETTTTHHHHHHHHHHHTHEEEEEEEEEEEESEEEEEEEETEEEEEEEEESSSGTTSEE
T ss_pred HHHHHHHHHHHh-CCCCCEEEeehhccHHHHHHHHHHhCCCccceeeeecccccchhhhhccCceEEeecccccccceeE
Confidence 356778888765 34556799999999999998875 3343322211 111111 12234567899999
Q ss_pred EEEeccccChhhHHHHHHHHHHcCCCeEEEEEEe
Q 020390 234 VIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTH 267 (327)
Q Consensus 234 iivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH 267 (327)
+||||+++||+|+..+++.|+++|++.|.+++.|
T Consensus 92 liVDDvi~tG~Tl~~~~~~L~~~g~~~v~~~vl~ 125 (125)
T PF00156_consen 92 LIVDDVIDTGGTLKEAIELLKEAGAKVVGVAVLV 125 (125)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHTTBSEEEEEEEE
T ss_pred EEEeeeEcccHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 9999999999999999999999999999999865
No 32
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=99.33 E-value=1.8e-11 Score=107.59 Aligned_cols=97 Identities=23% Similarity=0.135 Sum_probs=74.7
Q ss_pred CCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCcc------------EEEeec--CCCCCCeEEEEeccccChhhH
Q 020390 183 NNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKR------------IVRIKE--GNPAGCHVVIVDDLVQSGGTL 246 (327)
Q Consensus 183 ~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~------------~~~~~~--~~v~gk~viivDDii~TG~Tl 246 (327)
+.++|++|+.||+.++..++. +.++.+++|.++.... ....+. ..++|++|+||||++|||+|+
T Consensus 51 ~~d~Ivgv~~~Gi~~a~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~Tl 130 (175)
T PRK02304 51 DIDKIVGIEARGFIFGAALAYKLGIGFVPVRKPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGTL 130 (175)
T ss_pred CCCEEEEEccchHHHHHHHHHHhCCCEEEEEcCCCCCCceEeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHHH
Confidence 468999999999999998875 6788777766542110 001122 237899999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEEEeecCCCChHHHHh
Q 020390 247 IECQKVLAAHGAAKVSAYVTHGVFPKGSWERFT 279 (327)
Q Consensus 247 ~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~ 279 (327)
.++++.|+++||+.|.++|.+..-..++.+++.
T Consensus 131 ~~~~~~l~~~Ga~~v~v~vl~~~~~~~g~~~l~ 163 (175)
T PRK02304 131 EAAIKLLERLGAEVVGAAFVIELPDLGGREKLE 163 (175)
T ss_pred HHHHHHHHHcCCEEEEEEEEEEcccccchhhcC
Confidence 999999999999999999987765444566665
No 33
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=99.32 E-value=1.5e-11 Score=110.45 Aligned_cols=107 Identities=19% Similarity=0.175 Sum_probs=77.0
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCc---cE---EEeecCCCCCCeEEEEeccc
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDK---RI---VRIKEGNPAGCHVVIVDDLV 240 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~---~~---~~~~~~~v~gk~viivDDii 240 (327)
...+++.+... +.+.++|+++..||+++|..++. +.++.+.++.+.... .. +....++++||+|+||||++
T Consensus 72 ~~~la~~i~~~-~~~~D~Ivgi~~gG~~~A~~lA~~L~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~gk~VlIVDDVi 150 (200)
T PRK02277 72 ASAMADMLEKE-DEEVDVVVGIAKSGVPLATLVADELGKDLAIYHPKKWDHGEGEKKTGSFSRNFASVEGKRCVIVDDVI 150 (200)
T ss_pred HHHHHHHHHhc-CCCCCEEEeeccCCHHHHHHHHHHhCCCcEEEecccccccccccccceeccccccCCcCEEEEEeecc
Confidence 34455555322 24567999999999999999885 567766665543111 11 11123568999999999999
Q ss_pred cChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHh
Q 020390 241 QSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFT 279 (327)
Q Consensus 241 ~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~ 279 (327)
|||+|+.++++.|+++||+.+.++| ++..++.+.+.
T Consensus 151 tTG~Tl~~ai~~l~~~Ga~~v~v~v---lvdk~g~~~~~ 186 (200)
T PRK02277 151 TSGTTMKETIEYLKEHGGKPVAVVV---LIDKSGIDEID 186 (200)
T ss_pred CchHHHHHHHHHHHHcCCEEEEEEE---EEECcchhhhc
Confidence 9999999999999999999999998 44555555443
No 34
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=99.32 E-value=1.2e-11 Score=110.14 Aligned_cols=105 Identities=21% Similarity=0.187 Sum_probs=79.8
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcC--C---Ce--EEEeeeeeCCc-----cE--EE-eecCCCCCCe
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDH--F---PT--VVCAKVREGDK-----RI--VR-IKEGNPAGCH 232 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~--~---~~--~~~~K~R~~~~-----~~--~~-~~~~~v~gk~ 232 (327)
....+|++|.+.+...+++++++..||+.++..++.. . ++ .+++..++++. .. .. ....+++||+
T Consensus 20 ~i~~lA~~I~~~~~~~~~vivgi~~Gg~~fa~~L~~~L~~~~~~~~i~fi~~~sy~~~~~~~g~~~i~~~~~~~~v~gk~ 99 (189)
T PLN02238 20 RVAELAAQIASDYAGKSPVVLGVATGAFMFLADLVRAIQPLPRGLTVDFIRASSYGGGTESSGVAKVSGADLKIDVKGKH 99 (189)
T ss_pred HHHHHHHHHHHHcCCCCcEEEEEccCCHHHHHHHHHHhCccCCCeEEEEEEeeecCCCccccCceeEecCCCCCCCCCCE
Confidence 3566888887765446689999999999999988753 3 33 35565555321 11 11 2235789999
Q ss_pred EEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChH
Q 020390 233 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSW 275 (327)
Q Consensus 233 viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~ 275 (327)
|+|||||+|||.|+.++++.|++.||++|.++| ++.++..
T Consensus 100 VliVDDIidTG~Tl~~~~~~l~~~g~~~v~~av---L~dK~~~ 139 (189)
T PLN02238 100 VLLVEDIVDTGNTLSALVAHLEAKGAASVSVCA---LLDKRAR 139 (189)
T ss_pred EEEEecccchHHHHHHHHHHHHhCCCCEEEEEE---EEECCcc
Confidence 999999999999999999999999999999998 5566543
No 35
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=99.32 E-value=1.6e-11 Score=110.58 Aligned_cols=123 Identities=17% Similarity=0.212 Sum_probs=88.9
Q ss_pred HHHHHHHHhcCC-CCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCc--cEEEeecCC-CCCCeEEEEeccccC
Q 020390 169 IPLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDK--RIVRIKEGN-PAGCHVVIVDDLVQS 242 (327)
Q Consensus 169 ~~~la~~l~~~~-~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~--~~~~~~~~~-v~gk~viivDDii~T 242 (327)
...+++.+.+.+ ..+.++|++|+.+|++++..++. +.|+.+.+|.++..+ ..+. ..+. .+|++|+||||++||
T Consensus 52 l~~i~~~l~~~~~~~~~d~IvG~~~~Gi~~A~~vA~~l~~p~~~~RK~~K~~G~~~~~~-~~g~~~~g~~VlIVDDViTT 130 (206)
T PRK13809 52 LQTIATLIWRLRPSFNSSLLCGVPYTALTLATSISLKYNIPMVLRRKELKNVDPSDAIK-VEGLFTPGQTCLVINDMVSS 130 (206)
T ss_pred HHHHHHHHHHHhccCCCCEEEEecCccHHHHHHHHHHhCCCEEEEeCCCCCCCCcCEEE-EccccCCCCEEEEEEecccc
Confidence 344455444432 23568999999999999999885 678888888766543 2222 2343 589999999999999
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecC
Q 020390 243 GGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDS 298 (327)
Q Consensus 243 G~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnt 298 (327)
|+|+.++++.|+++|+..+.++|.-... .++.+++.+.|+ | +..++..+.
T Consensus 131 G~Ti~~a~~~L~~~G~~vv~v~vlvdr~-~~~~~~l~~~gi---~--v~sl~~~~~ 180 (206)
T PRK13809 131 GKSIIETAVALEEEGLVVREALVFLDRQ-KGACQPLGPQGI---K--LSSVFTVPD 180 (206)
T ss_pred CHHHHHHHHHHHHCCCEEEEEEEEEECc-ccHHHHHHhcCC---C--EEEEEEHHH
Confidence 9999999999999999988888865532 367788877653 2 556664443
No 36
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=99.30 E-value=3.1e-11 Score=107.26 Aligned_cols=128 Identities=14% Similarity=0.076 Sum_probs=90.5
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCc------------cEE--EeecCCCCCCe
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDK------------RIV--RIKEGNPAGCH 232 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~------------~~~--~~~~~~v~gk~ 232 (327)
..++++.+.+.++.+.++|++|+.||+.++..++. +.|+.+.+|.|.... ... ....+..+|++
T Consensus 37 l~~~~~~l~~~~~~~~D~Ivg~e~~Gi~lA~~vA~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~G~r 116 (187)
T PRK12560 37 LKETAKEIIKYIDKDIDKIVTEEDKGAPLATPVSLLSGKPLAMARWYPYSLSELNYNVVEIGSEYFEGVVYLNGIEKGDR 116 (187)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHHhhCCCEEEeccCCCcccceeEEeeeeeccceeeeeEccCCCCcCE
Confidence 33444444443334568999999999999998875 678888877664321 000 11234568999
Q ss_pred EEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHh-cccCCCccCCcCEEEEecCCCC
Q 020390 233 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFT-LKNGENMENAFANFWITDSCPL 301 (327)
Q Consensus 233 viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~-~~~~~~~~~~~~~iv~Tnti~~ 301 (327)
|+||||+++||+|+.++++.++++||..+.++|.-.....++.+.+. +.|+ | +..++..+..++
T Consensus 117 VlIVDDvitTG~T~~~ai~ll~~aGa~vv~v~~vvd~~~~~g~~~l~~~~gv---~--v~sl~~~~~~~~ 181 (187)
T PRK12560 117 VAIIDDTLSTGGTVIALIKAIENSGGIVSDVICVIEKTQNNGRKKLFTQTGI---N--VKSLVKIDVKPH 181 (187)
T ss_pred EEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchHHHHhhccCC---c--EEEEEEEEEecC
Confidence 99999999999999999999999999999888865543335677773 3443 2 677777666654
No 37
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=99.29 E-value=1.2e-11 Score=124.11 Aligned_cols=144 Identities=17% Similarity=0.158 Sum_probs=101.0
Q ss_pred HHHHHHhcCCCCC-CcEEEecCCChhHhHHhhhc--CCCeEE-EeeeeeC--------------CccEE-EeecCCCCCC
Q 020390 171 LLKQRLHQLPDAN-NIVIAFPDDGAWKRFHKMLD--HFPTVV-CAKVREG--------------DKRIV-RIKEGNPAGC 231 (327)
Q Consensus 171 ~la~~l~~~~~~~-~~viV~pd~G~~~ra~~~a~--~~~~~~-~~K~R~~--------------~~~~~-~~~~~~v~gk 231 (327)
.+++.|.+....+ +.++..||. +..+|..+++ +.|+.. ..+.|.. ..... ....++++||
T Consensus 276 ~~G~~La~~~~~~~D~Vv~vPds-g~~~A~~~A~~lgip~~~~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~v~gk 354 (469)
T PRK05793 276 RAGRQLYKEYPVDADIVIGVPDS-GIPAAIGYAEASGIPYGIGFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVNVEGK 354 (469)
T ss_pred HHHHHHHHhcCCCCCEEEEcCcc-HHHHHHHHHHHhCCCEeeeEEEeeeccccccChhHhhhhhhheEecccCccccCCC
Confidence 3555555543222 356666775 5778888775 566643 2233211 11111 1123568999
Q ss_pred eEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCC
Q 020390 232 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAP 311 (327)
Q Consensus 232 ~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k 311 (327)
+|+||||+++||.|+.++++.|+++||++|+++++|+.|..++...|..+. .+++++.+--...-...-..+-
T Consensus 355 ~VlLVDD~ItTGtTl~~~~~~Lr~aGAk~V~~~~~~p~~~~p~~~gid~~~-------~~elia~~~~~~ei~~~~g~ds 427 (469)
T PRK05793 355 RVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSSPPVKYPCYFGIDTPY-------RKELIGANMSVEEIREMIGADS 427 (469)
T ss_pred EEEEEccccCchHHHHHHHHHHHHcCCCEEEEEEECCCcCcchhhhccCCC-------hhhEEEcCCCHHHHHHHhCCCe
Confidence 999999999999999999999999999999999999999999999998876 7999988753221112224577
Q ss_pred eEEEechHHHH
Q 020390 312 FEVLSLAGSIA 322 (327)
Q Consensus 312 ~~v~~va~~la 322 (327)
+..+|+..++.
T Consensus 428 l~~ls~~~l~~ 438 (469)
T PRK05793 428 LGYLSIEGLLE 438 (469)
T ss_pred EeccCHHHHHH
Confidence 88888887764
No 38
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=99.28 E-value=4.8e-11 Score=104.26 Aligned_cols=109 Identities=22% Similarity=0.192 Sum_probs=77.9
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCC------------c-cEEEee-cCCCCCCe
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGD------------K-RIVRIK-EGNPAGCH 232 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~------------~-~~~~~~-~~~v~gk~ 232 (327)
...+++.+.+ .+.++|++|+.+|+..+..++. +.++..++|.+... . ..+... ....+||+
T Consensus 35 ~~~la~~i~~---~~~d~ivgi~~~G~~~A~~la~~L~~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~ 111 (169)
T TIGR01090 35 IDLLVERYKD---ANIDYIVGPEARGFIFGAALAYKLGVGFVPVRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQR 111 (169)
T ss_pred HHHHHHHhcc---CCCCEEEeehhccHHHHHHHHHHHCCCEEEEEeCCCCCCceeeeEEeeccCceEEEEehhhcCCcCE
Confidence 4455555543 2457999999999999998875 56666565543211 1 111111 22358999
Q ss_pred EEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhc
Q 020390 233 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTL 280 (327)
Q Consensus 233 viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~ 280 (327)
|+||||++|||+|+.++++.|+++||+.|.+++.-..-..++.+.+.+
T Consensus 112 VLIVDDIitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~g~~~i~~ 159 (169)
T TIGR01090 112 VLIVDDLLATGGTAEATDELIRKLGGEVVEAAFLIELKDLNGRAKLEP 159 (169)
T ss_pred EEEEeccccchHHHHHHHHHHHHcCCEEEEEEEEEEccccChHHHhcc
Confidence 999999999999999999999999999999998766544456666654
No 39
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=99.25 E-value=4.1e-11 Score=105.15 Aligned_cols=109 Identities=17% Similarity=0.180 Sum_probs=79.2
Q ss_pred HHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCC-----eEEEeeeeeCCccEEEeecCC-CCCCeEEEEecccc
Q 020390 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFP-----TVVCAKVREGDKRIVRIKEGN-PAGCHVVIVDDLVQ 241 (327)
Q Consensus 170 ~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~-----~~~~~K~R~~~~~~~~~~~~~-v~gk~viivDDii~ 241 (327)
.++++.+.+. .+.++|++|+.||+.+|..++. +.+ +.+.+|.++..... ....+. .+|++|+||||+++
T Consensus 43 ~~~~~~~~~~--~~~d~Ivg~~~gG~~~A~~la~~l~~~~~~~~~~~~rk~~k~~g~~-~~~~g~~~~g~~VlIVDDvi~ 119 (173)
T TIGR00336 43 RYAAAIIKSH--LEFDVIAGPALGGIPIATAVSVKLAKPGGDIPLCFNRKEAKDHGEG-GNIEGELLEGDKVVVVEDVIT 119 (173)
T ss_pred HHHHHHHHhc--CCCCEEEccccChHHHHHHHHHHhcCcCCCceEEEEcCCcccCCCC-CceecCCCCCCEEEEEecccc
Confidence 3344444431 3568999999999999998875 456 77777766433211 112344 47999999999999
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcc
Q 020390 242 SGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK 281 (327)
Q Consensus 242 TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~ 281 (327)
||+|+.++++.|+++||+.+.++|.-..-..++.+++.+.
T Consensus 120 TG~Tl~~a~~~l~~~Ga~v~~~~vlvdr~~~~~~~~l~~~ 159 (173)
T TIGR00336 120 TGTSILEAVEIIQAAGGQVAGVIIAVDRQERSAGQEFEKE 159 (173)
T ss_pred ChHHHHHHHHHHHHcCCeEEEEEEEEecCchhHHHHHHHh
Confidence 9999999999999999999999886544332467777754
No 40
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=99.25 E-value=3.3e-11 Score=106.03 Aligned_cols=100 Identities=17% Similarity=0.154 Sum_probs=73.3
Q ss_pred cHHHHHHHHhcCC-CCCCcEEEecCCChhHhHHhhhcCC--------CeEEEeeeeeCC-------ccEE--EeecCCCC
Q 020390 168 GIPLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLDHF--------PTVVCAKVREGD-------KRIV--RIKEGNPA 229 (327)
Q Consensus 168 ~~~~la~~l~~~~-~~~~~viV~pd~G~~~ra~~~a~~~--------~~~~~~K~R~~~-------~~~~--~~~~~~v~ 229 (327)
....+|+++.+.+ +.+++++++++.||+.++..++..+ ++.+++..++.+ .... ....++++
T Consensus 15 ~i~~la~~i~~~~~~~~~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~~~~~~~~~~~~~~l~~~v~ 94 (176)
T PRK05205 15 ALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTKKGLHPQVKPTDIPFDIE 94 (176)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCccccCcccccccccCCCCCC
Confidence 4567888887643 2357899999999999998876422 244444332221 1111 12345799
Q ss_pred CCeEEEEeccccChhhHHHHHHHHHHcC-CCeEEEEEEe
Q 020390 230 GCHVVIVDDLVQSGGTLIECQKVLAAHG-AAKVSAYVTH 267 (327)
Q Consensus 230 gk~viivDDii~TG~Tl~~~~~~L~~~G-A~~v~~~~tH 267 (327)
||+|+|||||+|||+|+..+++.|++.| +++|.+++..
T Consensus 95 gr~VLIVDDIidTG~Tl~~~~~~L~~~G~~~~v~~avL~ 133 (176)
T PRK05205 95 GKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLV 133 (176)
T ss_pred CCEEEEEecccCcHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence 9999999999999999999999999999 7899999854
No 41
>PRK07322 adenine phosphoribosyltransferase; Provisional
Probab=99.25 E-value=6.9e-11 Score=104.22 Aligned_cols=99 Identities=22% Similarity=0.269 Sum_probs=71.4
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCC--cc----E---------EEee----cCC
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGD--KR----I---------VRIK----EGN 227 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~--~~----~---------~~~~----~~~ 227 (327)
...+++.+.+.+..+.++|++|+.||+.++..++. +.++.+.+|.+... .. . .... ..+
T Consensus 38 ~~~~~~~La~~l~~~~d~Iv~v~~gGiplA~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (178)
T PRK07322 38 TEAAAEALAKRLPTEVDVLVTPETKGIPLAHALSRRLGKPYVVARKSRKPYMQDPIIQEVVSITTGKPQLLVLDGADAEK 117 (178)
T ss_pred HHHHHHHHHHHcCCCCCEEEEeccCCHHHHHHHHHHHCCCEEEEEEeCCCCCCCceEEEEEEEEeccceEEEecCccccc
Confidence 34445555443322557999999999999998875 66776666655321 00 0 0011 124
Q ss_pred CCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEe
Q 020390 228 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTH 267 (327)
Q Consensus 228 v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH 267 (327)
++||+|+||||+++||+|+.++++.|+++||+.|.+++.-
T Consensus 118 ~~gk~VLIVDDiitTG~Tl~aa~~~L~~~GA~~V~~~~v~ 157 (178)
T PRK07322 118 LKGKRVAIVDDVVSTGGTLTALERLVERAGGQVVAKAAIF 157 (178)
T ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEE
Confidence 6899999999999999999999999999999999998853
No 42
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=99.23 E-value=8e-11 Score=106.39 Aligned_cols=110 Identities=14% Similarity=0.109 Sum_probs=86.2
Q ss_pred CCcEEEecCCChhHhHHhhhcC---CCeEEEeeeeeCCc-c-E--EEeecCCCCCCeEEEEeccccChhhHHHHHHHHHH
Q 020390 183 NNIVIAFPDDGAWKRFHKMLDH---FPTVVCAKVREGDK-R-I--VRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAA 255 (327)
Q Consensus 183 ~~~viV~pd~G~~~ra~~~a~~---~~~~~~~K~R~~~~-~-~--~~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~ 255 (327)
+++++|+++.||..++..+++. .++.++..+|+... . . ...+..+++||+|+|+|||++||+|+..+++.|++
T Consensus 70 ~~~vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~~ 149 (209)
T PRK00129 70 KKLVIVPILRAGLGMVDGVLKLIPSARVGHIGLYRDEETLEPVEYYVKLPEDIDERTVIVVDPMLATGGSAIAAIDLLKK 149 (209)
T ss_pred CeEEEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeCCCCCCCEEEEeeCCCcCCCCEEEEECCcccchHHHHHHHHHHHH
Confidence 4589999999999999988753 34556667776432 1 1 22246689999999999999999999999999999
Q ss_pred cCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCC
Q 020390 256 HGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 301 (327)
Q Consensus 256 ~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~ 301 (327)
.|+++|.++|+ +.+++++++|.+++ | +--++|-++-.
T Consensus 150 ~G~~~I~~~~l--l~~~~gl~~l~~~~----p---~v~i~~~~iD~ 186 (209)
T PRK00129 150 RGAKNIKVLCL--VAAPEGIKALEEAH----P---DVEIYTAAIDE 186 (209)
T ss_pred cCCCEEEEEEE--ecCHHHHHHHHHHC----C---CcEEEEEeecC
Confidence 99999999997 77889999999885 1 34455655543
No 43
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=99.22 E-value=1.5e-10 Score=103.91 Aligned_cols=112 Identities=20% Similarity=0.238 Sum_probs=81.1
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccChhhH
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTL 246 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~TG~Tl 246 (327)
...+++.+.+.. .+.++|++|+.||+.+|..++. +.++.+.+|.++.............+|++|+||||+++||+|+
T Consensus 51 ~~~la~~i~~~~-~~~d~Ivgi~~gG~~~A~~la~~L~~~~~~~rk~~~~~g~~~~~~~~~~~g~~VliVDDvi~tG~Tl 129 (202)
T PRK00455 51 GRFLAEAIKDSG-IEFDVVAGPATGGIPLAAAVARALDLPAIFVRKEAKDHGEGGQIEGRRLFGKRVLVVEDVITTGGSV 129 (202)
T ss_pred HHHHHHHHHhcC-CCCCEEEecccCcHHHHHHHHHHhCCCEEEEecccCCCCCCceEEccCCCCCEEEEEecccCCcHHH
Confidence 445555565431 2556999999999999999886 6777777776543221111112245799999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhccc
Q 020390 247 IECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 247 ~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
..+++.|+++||+.+.++|....- .+..+++++.|
T Consensus 130 ~~~~~~l~~~Ga~~v~~~vlv~~~-~~~~~~~~~~g 164 (202)
T PRK00455 130 LEAVEAIRAAGAEVVGVAVIVDRQ-SAAQEVFADAG 164 (202)
T ss_pred HHHHHHHHHcCCEEEEEEEEEECc-chHHHHHHhcC
Confidence 999999999999999999866542 23456666655
No 44
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=99.16 E-value=2.7e-10 Score=101.23 Aligned_cols=97 Identities=19% Similarity=0.214 Sum_probs=72.0
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccChhhH
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTL 246 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~TG~Tl 246 (327)
...+++++.+. ..+.++|++++.||+.+|..++. +.++.+.+|.+ +...... .....+|++|+||||+++||+|+
T Consensus 45 ~~~La~~i~~~-~~~~d~Ivgi~~gGi~~A~~la~~L~~~~i~~~k~~-~~~~~~~-~~~l~~G~~VLIVDDIi~TG~Tl 121 (187)
T TIGR01367 45 GGELAQKILDY-GLKVDFIVGPAMGGVILGYEVARQLSVRSIFAEREG-GGMKLRR-GFAVKPGEKFVAVEDVVTTGGSL 121 (187)
T ss_pred HHHHHHHHHHh-CCCCCEEEEEccCcHHHHHHHHHHhCCCeEEEEEeC-CcEEEee-cccCCCCCEEEEEEeeecchHHH
Confidence 45566666542 34678999999999999999886 56666565544 2111111 01124799999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEEEee
Q 020390 247 IECQKVLAAHGAAKVSAYVTHG 268 (327)
Q Consensus 247 ~~~~~~L~~~GA~~v~~~~tH~ 268 (327)
.++++.|+++||+.|.+++...
T Consensus 122 ~~a~~~l~~~Ga~vv~~~vlid 143 (187)
T TIGR01367 122 LEAIRAIEGQGGQVVGLACIID 143 (187)
T ss_pred HHHHHHHHHcCCeEEEEEEEEE
Confidence 9999999999999999988554
No 45
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=99.15 E-value=3e-10 Score=102.62 Aligned_cols=104 Identities=17% Similarity=0.189 Sum_probs=77.2
Q ss_pred cHHHHHHHHhcCCC------CCCcEEEecCCChhHhHHhhhcC-----CC--eEEEeeeeeCC-----c--cEEEeecCC
Q 020390 168 GIPLLKQRLHQLPD------ANNIVIAFPDDGAWKRFHKMLDH-----FP--TVVCAKVREGD-----K--RIVRIKEGN 227 (327)
Q Consensus 168 ~~~~la~~l~~~~~------~~~~viV~pd~G~~~ra~~~a~~-----~~--~~~~~K~R~~~-----~--~~~~~~~~~ 227 (327)
....||.+|.+.+. .+++++++...||+.++..+.+. .+ +.+++-.++++ . .+......+
T Consensus 36 ~i~~LA~~I~~~~~~~~~~~~~~~vivgVlkGg~~fa~dL~r~L~~~~~~~~vdfi~vssY~~~~~s~g~~~i~~~~~~~ 115 (211)
T PTZ00271 36 ATAKCAKKIAEDYRSFKLTTENPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGTGVETSGQVRMLLDVRDS 115 (211)
T ss_pred HHHHHHHHHHHHhhhccccCCCCeEEEEEcCCCHHHHHHHHHHhcccCCCeeEEEEEEEecCCCCcccCceEEecCCCCC
Confidence 46778888877543 24678999999999999988642 33 34444334322 1 111223457
Q ss_pred CCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCCh
Q 020390 228 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGS 274 (327)
Q Consensus 228 v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a 274 (327)
++||+|||||||++||.||..+.+.|++.|+++|+.++ ++.++.
T Consensus 116 i~gk~VLIVDDIvDTG~TL~~v~~~l~~~~p~svk~av---L~dK~~ 159 (211)
T PTZ00271 116 VENRHILIVEDIVDSAITLQYLMRFMLAKKPASLKTVV---LLDKPS 159 (211)
T ss_pred CCCCEEEEEecccCCHHHHHHHHHHHHhcCCCEEEEEE---EEEccc
Confidence 99999999999999999999999999999999999998 555543
No 46
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=99.15 E-value=8.5e-10 Score=98.19 Aligned_cols=114 Identities=12% Similarity=0.033 Sum_probs=84.4
Q ss_pred CCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCC--ccE-E-----------E--eec-CCC-CCCeEEEEeccccC
Q 020390 183 NNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGD--KRI-V-----------R--IKE-GNP-AGCHVVIVDDLVQS 242 (327)
Q Consensus 183 ~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~--~~~-~-----------~--~~~-~~v-~gk~viivDDii~T 242 (327)
+.++|++|+.+|+..|..++. +.|+++++|..+.. ... . . .+. ..+ +|++|+||||+++|
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~~k~~~~~~~~~~~~~~~~~~~~~~l~i~~~~i~~G~rVlIVDDviaT 129 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFAKKKKSLTLTDDVYTATVYSFTKQVTSTVSVSKKFLSEGDRVLIIDDFLAN 129 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCCCCceEEEEEeeeccCceEEEEEEhhhCCCCCEEEEEeehhhc
Confidence 457899999999999998875 78898888876432 110 0 0 011 223 79999999999999
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCC
Q 020390 243 GGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 301 (327)
Q Consensus 243 G~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~ 301 (327)
|+|+.++++.++++||..+.+++.-..-..++.+++.+.|. | +..++..+.+++
T Consensus 130 GgT~~a~~~lv~~aGa~vvgv~~lvd~~~~~g~~~l~~~g~---~--~~sl~~~~~~~~ 183 (189)
T PRK09219 130 GQAALGLIDIIEQAGAKVAGIGIVIEKSFQDGRKLLEEKGY---R--VESLARIASLEN 183 (189)
T ss_pred ChHHHHHHHHHHHCCCEEEEEEEEEEccCccHHHHHHhcCC---c--EEEEEEeeeccC
Confidence 99999999999999999988887543322356778876553 2 677887777665
No 47
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=99.14 E-value=2.1e-10 Score=105.44 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=74.7
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcCC-----------C--e---EEEeeeeeCCc----c--EEEeec
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHF-----------P--T---VVCAKVREGDK----R--IVRIKE 225 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~~-----------~--~---~~~~K~R~~~~----~--~~~~~~ 225 (327)
....||.+|.+.+..+++++++..+||+.++..+.+.+ + . .+++-.++.+. + +.....
T Consensus 66 rI~~LA~~I~~dy~~~~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~vsSY~~~~s~g~v~i~~~~~ 145 (241)
T PTZ00149 66 RVEKLAYDIKQVYGNEELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRVKSYCNDESTGKLEIVSDDL 145 (241)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEEEEccCCCcCCceEEecccc
Confidence 46778999988666678999999999999988765311 1 1 33433333221 1 222224
Q ss_pred CCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEE
Q 020390 226 GNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVT 266 (327)
Q Consensus 226 ~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~t 266 (327)
.+++||+|+|||||+|||.|+.++++.|++.|+++|+++|.
T Consensus 146 ~~l~gk~VLIVDDIidTG~Tl~~~~~~L~~~g~~~V~va~L 186 (241)
T PTZ00149 146 SCLKDKHVLIVEDIIDTGNTLVKFCEYLKKFEPKTIRIATL 186 (241)
T ss_pred cccCCCEEEEEEeEeChHHHHHHHHHHHHhcCCCEEEEEEE
Confidence 47899999999999999999999999999999999999984
No 48
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=99.13 E-value=5.7e-10 Score=99.14 Aligned_cols=98 Identities=16% Similarity=0.121 Sum_probs=77.0
Q ss_pred CCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCC-CCCCeEEEEeccccChhhHHHHHHHHHHcCCC
Q 020390 183 NNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGN-PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAA 259 (327)
Q Consensus 183 ~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~-v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~ 259 (327)
+.+.|++|..+|++.|..++. +.|+++.+|..+....- ....+. .+|++|+||||++|||+|+.++++.++++|+.
T Consensus 73 ~~d~I~g~~~~GiplA~~vA~~l~~p~v~vRK~~k~~g~~-~~~~g~~~~g~rVlIVDDVitTGgS~~~~i~~l~~~Ga~ 151 (187)
T PRK13810 73 DVDTVAGVELGGVPLATAVSLETGLPLLIVRKSVKDYGTG-SRFVGDLKPEDRIVMLEDVTTSGGSVREAIEVVREAGAY 151 (187)
T ss_pred CCCEEEEEccchHHHHHHHHHHhCCCEEEEecCCCccCCC-ceEEccCCCcCEEEEEEeccCCChHHHHHHHHHHHCCCE
Confidence 457899999999999988774 78888888875433211 112344 47999999999999999999999999999999
Q ss_pred eEEEEEEeecCCCChHHHHhccc
Q 020390 260 KVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 260 ~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
.+.++|.-..- .++.++|++.|
T Consensus 152 V~~v~vlvdr~-~g~~~~l~~~g 173 (187)
T PRK13810 152 IKYVITVVDRE-EGAEENLKEAD 173 (187)
T ss_pred EEEEEEEEECC-cChHHHHHHcC
Confidence 88888866543 46788887765
No 49
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=99.13 E-value=9.8e-10 Score=97.97 Aligned_cols=127 Identities=11% Similarity=-0.006 Sum_probs=89.8
Q ss_pred HHHHHHHHhcCC-CCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCc-----cE-----------EEeecC-CC
Q 020390 169 IPLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDK-----RI-----------VRIKEG-NP 228 (327)
Q Consensus 169 ~~~la~~l~~~~-~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~-----~~-----------~~~~~~-~v 228 (327)
...+++.+.+.+ +.+.++|++|+.+|+..+..++. +.++++++|..+... .. ...+.+ .+
T Consensus 35 l~~v~~~l~~~~~~~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK~~k~~~~~~~~~~~~~s~~~~~~~~l~i~~~~l 114 (191)
T TIGR01744 35 MQEVGEEFARRFADDGITKIVTIEASGIAPAIMTGLKLGVPVVFARKKKPLTLTDNLLTASVHSFTKQTTSTVAVSGEFL 114 (191)
T ss_pred HHHHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEeCCCCCCCCcceEEEEEEeecCccEEEEEEHHhC
Confidence 445555555443 23557899999999999988774 788988988754221 00 001223 23
Q ss_pred -CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCC
Q 020390 229 -AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCP 300 (327)
Q Consensus 229 -~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~ 300 (327)
+|++|+||||+++||+|+.++++.++++||..+.++|.-..-..++.++|.+.|+ | +..++.-+++.
T Consensus 115 ~~G~rVLIVDDvvtTGgT~~a~~~ll~~aGa~Vvgv~~lvd~~~~~g~~~l~~~gv---p--v~sL~~~~~l~ 182 (191)
T TIGR01744 115 SDQDRVLIIDDFLANGQAAHGLVDIAKQAGAKIAGIGIVIEKSFQNGRQELVELGY---R--VESLARIQSLE 182 (191)
T ss_pred CCcCEEEEEEehhccChHHHHHHHHHHHCCCEEEEEEEEEEecCccHHHHHHhcCC---c--EEEEEEEeeEe
Confidence 7999999999999999999999999999999988888554433457788877653 2 66777655553
No 50
>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=99.07 E-value=1.7e-09 Score=96.59 Aligned_cols=99 Identities=23% Similarity=0.232 Sum_probs=73.1
Q ss_pred CCcEEEecCCChhHhHHhhhcCC---C-eEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccChhhHHHHHHHHHHcCC
Q 020390 183 NNIVIAFPDDGAWKRFHKMLDHF---P-TVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGA 258 (327)
Q Consensus 183 ~~~viV~pd~G~~~ra~~~a~~~---~-~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA 258 (327)
+.++|++|..||++.+..++..+ + +.+.+|+-+..+.......+..+|++|+||||++|||+++.++++.|+++|+
T Consensus 61 ~~d~v~G~a~ggiP~A~~~a~~l~~~~~~~~~Rke~K~hG~~~~ieG~~~~G~kVvvVEDViTTG~Si~eai~~l~~~G~ 140 (201)
T COG0461 61 EFDVVAGPALGGIPLAAATALALAHLPPMAYVRKEAKDHGTGGLIEGGEVKGEKVVVVEDVITTGGSILEAVEALREAGA 140 (201)
T ss_pred CCcEEEeccccchHHHHHHHHHhccCCcEEEEeceeccCCCcceeEecCCCCCEEEEEEecccCCHhHHHHHHHHHHcCC
Confidence 56899999999999999887654 3 6667776544332111123345899999999999999999999999999999
Q ss_pred CeEEEEEEeecCCCChHHHHhccc
Q 020390 259 AKVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 259 ~~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
..+.++|.--.- ..+.+.+.+.|
T Consensus 141 ~V~gv~~ivDR~-~~~~~~~~~~g 163 (201)
T COG0461 141 EVVGVAVIVDRQ-SGAKEVLKEYG 163 (201)
T ss_pred eEEEEEEEEecc-hhHHHHHHhcC
Confidence 988888732221 24556666665
No 51
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=99.05 E-value=6.3e-10 Score=95.87 Aligned_cols=107 Identities=16% Similarity=0.103 Sum_probs=79.1
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEE--eeeeeCCc----cEEEeecCCCCCCeEEEEeccc
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVC--AKVREGDK----RIVRIKEGNPAGCHVVIVDDLV 240 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~--~K~R~~~~----~~~~~~~~~v~gk~viivDDii 240 (327)
+..+++.+.+....+-+++|+....|++.|..++. +.++++. +|.|..+. -.++...+.++||+|+||||++
T Consensus 72 s~am~Dm~m~~~~~evDvVvGIa~sGvPlAtmvA~elg~elaiY~PrK~~~de~~~~~G~iS~NFa~V~gK~cvIVDDvi 151 (203)
T COG0856 72 SEAMADMIMEKVSFEVDVVVGIAISGVPLATMVAYELGKELAIYHPRKHRKDEGAGKGGSISSNFASVEGKRCVIVDDVI 151 (203)
T ss_pred HHHHHHHHHHhccceeEEEEEEeecCccHHHHHHHHhCCceEEEecccccccccCCcCceeecccccccCceEEEEeccc
Confidence 45677744333345668999999999999998885 5566554 35554322 2344456789999999999999
Q ss_pred cChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHH
Q 020390 241 QSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERF 278 (327)
Q Consensus 241 ~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l 278 (327)
|||.|+.++++.|++.|++.+-+.+ +.++.+.+.+
T Consensus 152 ttG~Ti~E~Ie~lke~g~kpv~v~V---L~dK~G~dei 186 (203)
T COG0856 152 TTGSTIKETIEQLKEEGGKPVLVVV---LADKKGVDEI 186 (203)
T ss_pred ccChhHHHHHHHHHHcCCCcEEEEE---EEccCCcccc
Confidence 9999999999999999999988877 4444444333
No 52
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=99.05 E-value=1.2e-09 Score=98.66 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=78.9
Q ss_pred CCcEEEecCCChhHhHHhhhcC---CCeEEEeeeeeCCc-c-E--EEeecCCCCCCeEEEEeccccChhhHHHHHHHHHH
Q 020390 183 NNIVIAFPDDGAWKRFHKMLDH---FPTVVCAKVREGDK-R-I--VRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAA 255 (327)
Q Consensus 183 ~~~viV~pd~G~~~ra~~~a~~---~~~~~~~K~R~~~~-~-~--~~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~ 255 (327)
++.++|+...||..++..+.+. ..+.++..+|+... . . ...+..+++||+|+|+|||++||+|+..+++.|++
T Consensus 68 ~~i~~V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~~ 147 (207)
T TIGR01091 68 KKIVLVPILRAGLGMVDGVLKLIPEAKVGHVGAYRNEETLKPVPYYSKLPEDIDERTVIVLDPMLATGGTMIAALDLLKK 147 (207)
T ss_pred CcEEEEEEeCCcHHHHHHHHHhCCcCceeEEEEEeCCCCCCCEEEEecCCCCCCCCEEEEECCCccchHHHHHHHHHHHH
Confidence 4588899999999999987753 34555666775432 1 1 12246689999999999999999999999999999
Q ss_pred cCCCeEEEEEEeecCCCChHHHHhccc
Q 020390 256 HGAAKVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 256 ~GA~~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
.||++|.++|+ +.+++++++|.+..
T Consensus 148 ~G~~~I~v~~l--l~~~~gl~~l~~~~ 172 (207)
T TIGR01091 148 RGAKKIKVLSI--VAAPEGIEAVEKAH 172 (207)
T ss_pred cCCCEEEEEEE--ecCHHHHHHHHHHC
Confidence 99999999986 77888999998763
No 53
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=98.96 E-value=9.5e-09 Score=94.66 Aligned_cols=111 Identities=18% Similarity=0.124 Sum_probs=78.9
Q ss_pred HHHHHHHHhcCCC-CCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCc-cE------------EE-eec-CC-CC
Q 020390 169 IPLLKQRLHQLPD-ANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDK-RI------------VR-IKE-GN-PA 229 (327)
Q Consensus 169 ~~~la~~l~~~~~-~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~-~~------------~~-~~~-~~-v~ 229 (327)
...+++.+.+.+. .+.++|+++..+|+..|..++. +.|+++++|.+.... .. .. .+. .. .+
T Consensus 96 ~~~v~~~la~~~~~~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~Rk~~~~~~~~~v~~y~s~s~~~~~~~~l~~~~l~~ 175 (238)
T PRK08558 96 LRLIAPVVAERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAKKSKETGVEKFYEEYQRLASGIEVTLYLPASALKK 175 (238)
T ss_pred HHHHHHHHHHHccCCCCCEEEEECcccHHHHHHHHHHHCcCEEEEEecCCCCCcceEEEeeccCCCceeEEEecHHHcCC
Confidence 3445555554432 3457899999999999998875 678888877653211 11 01 111 22 57
Q ss_pred CCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhc
Q 020390 230 GCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTL 280 (327)
Q Consensus 230 gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~ 280 (327)
|++|+||||+++||+|+..+++.++++||+.+.++|.-..- ..+.+++.+
T Consensus 176 G~rVLIVDDvi~TG~Tl~~~~~ll~~~ga~vvgv~vlv~~~-~~~~~~l~~ 225 (238)
T PRK08558 176 GDRVLIVDDIIRSGETQRALLDLARQAGADVVGVFFLIAVG-EVGIDRARE 225 (238)
T ss_pred cCEEEEEecccccCHHHHHHHHHHHHcCCEEEEEEEEEecC-chHHHHHhH
Confidence 99999999999999999999999999999999888865442 234666664
No 54
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=98.94 E-value=3.2e-09 Score=106.81 Aligned_cols=148 Identities=16% Similarity=0.142 Sum_probs=99.1
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEE-EeeeeeC--------------Ccc-EEEeecCCCCC
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVV-CAKVREG--------------DKR-IVRIKEGNPAG 230 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~-~~K~R~~--------------~~~-~~~~~~~~v~g 230 (327)
-..++++|.+....+.++|++.-..+...|..++. +.|+.. .-|.|.. +.+ .+......++|
T Consensus 271 R~~lg~~La~~~~~~~D~VvpVPnqa~~lA~~la~~lgip~~~~lvk~~~~~rt~~~~~q~~R~~~vr~~f~~~~~~~~g 350 (484)
T PRK07272 271 RKRMGKRLAQEFPHDADIVIGVPNSSLSAASGYAEESGLPYEMGLVKNQYVARTFIQPTQELREQGVRMKLSAVSGVVKG 350 (484)
T ss_pred HHHHHHHHHhhcCCCCCEEEEecHHHHHHHHHHHHHHCCCcccCeEEEccCCccccCCCHHHHHHHHhhCccccccccCC
Confidence 34677777764333345666544456666776664 555421 1122211 111 11223456899
Q ss_pred CeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCC
Q 020390 231 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKA 310 (327)
Q Consensus 231 k~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~ 310 (327)
|+|+||||++|||.|+.++++.|+++||++|.++++|+.+..++.--|..+. .++++..+.-...-...-..+
T Consensus 351 k~vllVDDvittG~T~~~~~~~L~~~Ga~~v~~~~~~p~~~~~c~ygid~~~-------~~~lia~~~~~~ei~~~~~~d 423 (484)
T PRK07272 351 KRVVMVDDSIVRGTTSRRIVQLLKEAGAKEVHVAIASPELKYPCFYGIDIQT-------RRELISANHSVEEICDIIGAD 423 (484)
T ss_pred CEEEEEccccCchHHHHHHHHHHHhcCCcEEEEEEeCCccccChhhhccCcC-------HHHHHhcCCCHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999988887654 466665554322211222467
Q ss_pred CeEEEechHHHHH
Q 020390 311 PFEVLSLAGSIAD 323 (327)
Q Consensus 311 k~~v~~va~~la~ 323 (327)
-+.++|+..++.-
T Consensus 424 sl~~~~~~~l~~~ 436 (484)
T PRK07272 424 SLTYLSVDGLIES 436 (484)
T ss_pred EEEEecHHHHHHH
Confidence 7899999887653
No 55
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=98.87 E-value=1.6e-08 Score=101.80 Aligned_cols=112 Identities=18% Similarity=0.157 Sum_probs=81.3
Q ss_pred HHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeE--EEeeeeeCC-----------ccEEEe----ecCCCCC
Q 020390 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTV--VCAKVREGD-----------KRIVRI----KEGNPAG 230 (327)
Q Consensus 170 ~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~--~~~K~R~~~-----------~~~~~~----~~~~v~g 230 (327)
..+++.|.+....+.++|++.-.++...|..++. +.++. ++ |.|... ...... ....++|
T Consensus 282 ~~~g~~La~~~~~~~D~Vv~VP~sg~~~A~~la~~lgip~~~~li-r~~y~grt~i~~~q~~r~~~v~~k~~~~~~~~~g 360 (479)
T PRK09123 282 KNIGRELARESPVDADVVVPVPDSGVPAAIGYAQESGIPFELGII-RNHYVGRTFIQPTQQIRNLGVKLKHNANRAVIEG 360 (479)
T ss_pred HHHHHHHHHhCCCCCeEEEEcCccHHHHHHHHHHhcCCCeeheEE-EEeecCccccccccccccccEEEEecccccccCC
Confidence 4566667654334556778777788888888875 55653 33 334321 000111 1234789
Q ss_pred CeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEE-----EeecCCC---ChHHHHhccc
Q 020390 231 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV-----THGVFPK---GSWERFTLKN 282 (327)
Q Consensus 231 k~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~-----tH~~~~~---~a~~~l~~~~ 282 (327)
|+|+||||+++||.|+.++++.|+++||++|++++ +|+.|.+ ++.+.|..++
T Consensus 361 k~vvlvDD~i~tG~Tl~~~~~~l~~~Ga~~v~~~~~~p~~~~~~~~gid~~~~~~l~~~~ 420 (479)
T PRK09123 361 KRVVLVDDSIVRGTTSRKIVQMLRDAGAKEVHLRIASPPITHPCFYGIDTPERSKLLAAT 420 (479)
T ss_pred CEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEcCCCCccceeecCCCCCHHHHHHcC
Confidence 99999999999999999999999999999999999 9999998 8888776653
No 56
>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated
Probab=98.83 E-value=2.9e-08 Score=99.64 Aligned_cols=98 Identities=22% Similarity=0.213 Sum_probs=77.0
Q ss_pred CCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCC-CCCeEEEEeccccChhhHHHHHHHHHHcCCC
Q 020390 183 NNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNP-AGCHVVIVDDLVQSGGTLIECQKVLAAHGAA 259 (327)
Q Consensus 183 ~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v-~gk~viivDDii~TG~Tl~~~~~~L~~~GA~ 259 (327)
+.+.|++|..||++.+..++. +.|+.+.+|+.+..+.. ....|.+ +|++|+||||++|||+|+.++++.|+++|+.
T Consensus 344 ~~D~I~Gia~gGiPlAt~lA~~lg~p~v~vRKe~K~~G~~-~~ieG~~~~G~rVlIVDDViTTGgSi~eaie~l~~aG~~ 422 (477)
T PRK05500 344 TFDRIAGIPYGSLPTATGLALHLHHPMIFPRKEVKAHGTR-RLIEGNFHPGETVVVVDDILITGKSVMEGAEKLKSAGLN 422 (477)
T ss_pred CCCEEEEEccchHHHHHHHHHHhCCCEEEEecCcCccCCC-ceEecCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCE
Confidence 457899999999999998874 77888888876544321 1234554 7999999999999999999999999999999
Q ss_pred eEEEEEEeecCCCChHHHHhccc
Q 020390 260 KVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 260 ~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
.+.++|.--.- .++.++|++.|
T Consensus 423 V~~v~vlVDR~-~g~~~~L~~~g 444 (477)
T PRK05500 423 VRDIVVFIDHE-QGVKDKLQSHG 444 (477)
T ss_pred EEEEEEEEECC-cchHHHHHhcC
Confidence 88888754432 35677787665
No 57
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=98.83 E-value=3.8e-08 Score=86.88 Aligned_cols=110 Identities=20% Similarity=0.175 Sum_probs=79.3
Q ss_pred HHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCcc-------------EEEeecCCC-CCCe
Q 020390 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKR-------------IVRIKEGNP-AGCH 232 (327)
Q Consensus 169 ~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~-------------~~~~~~~~v-~gk~ 232 (327)
.+.+++.+.. .+.+.|++|..+|+..+..+|. +.|+++++|.++.... ........+ +|++
T Consensus 42 i~~~~~~~~~---~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vRK~~kl~~~~~~~~~~~~~~~~~l~~~~~~l~~G~r 118 (179)
T COG0503 42 IDELAERYKD---DGIDKIVTIEARGIPLAAAVALELGVPFVPVRKKGKLPEESVVETYYLEYGSETLELHKDALKPGDR 118 (179)
T ss_pred HHHHHHHhcc---cCCCEEEEEccccchhHHHHHHHhCCCEEEEEecCCCCCcceeEEEEEeccceEEEEEhhhCCCCCE
Confidence 3445555543 2457899999999999998885 6788888887653210 011112223 6999
Q ss_pred EEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcc
Q 020390 233 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK 281 (327)
Q Consensus 233 viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~ 281 (327)
|+||||+++||+|+..+.+.+.++|+.-+.+++.-.....+..+++...
T Consensus 119 VlIVDDllaTGgT~~a~~~Ll~~~ga~vvg~~~~ie~~~~~gr~~l~~~ 167 (179)
T COG0503 119 VLIVDDLLATGGTALALIELLEQAGAEVVGAAFVIELGELDGRKKLEDD 167 (179)
T ss_pred EEEEecchhcChHHHHHHHHHHHCCCEEEEEEEEEEcCccccchhhccC
Confidence 9999999999999999999999999999998886555444445555543
No 58
>PRK06031 phosphoribosyltransferase; Provisional
Probab=98.82 E-value=7.2e-08 Score=88.52 Aligned_cols=127 Identities=16% Similarity=0.070 Sum_probs=81.5
Q ss_pred HHHHHHHhcCC-CCCCcEEEecCCChhHhHHhhhcCCC---eEEEeeeeeC---C-------------ccEEEeec----
Q 020390 170 PLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLDHFP---TVVCAKVREG---D-------------KRIVRIKE---- 225 (327)
Q Consensus 170 ~~la~~l~~~~-~~~~~viV~pd~G~~~ra~~~a~~~~---~~~~~K~R~~---~-------------~~~~~~~~---- 225 (327)
..+++.|.+.+ ..+.++|+++..+|+..|..++..++ +..+.+.|+. + ......+.
T Consensus 70 ~~la~~La~~~~~~~~DvIVgv~~~Gi~lA~~lA~~Lg~~~~vpl~~~rK~~~~~~l~~~~~sitt~~~~~~~~l~~~~~ 149 (233)
T PRK06031 70 DALAEHLAEKARAFDPDVVAGLPTLGLTLAAAVARKLGHTRYVPLGTSRKFWYRDELSVPLSSITTPDQGKRLYIDPRML 149 (233)
T ss_pred HHHHHHHHHHcccCCCcEEEEeccCCHHHHHHHHHHHCCCCceEEEEccccccccccccceeeeeccCccceEEeccccc
Confidence 34556555543 23567999999999999998875322 2223332321 0 00000111
Q ss_pred CCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCC
Q 020390 226 GNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 301 (327)
Q Consensus 226 ~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~ 301 (327)
..++|++|+||||+++||+|+..+++.|+++|++.+.+++.-- ......++|.+.+- .--++++.--.+|.
T Consensus 150 ~~~~GkrVLIVDDVitTG~Tl~aa~~lL~~~Ga~Vvgv~v~v~-~g~~~~~~l~~~~~----~~~~~~~~~~~~p~ 220 (233)
T PRK06031 150 PLLEGRRVALIDDVISSGASIVAGLRLLAACGIEPAGIGAAML-QSERWRESLAAAGP----QWPARVVGVFATPI 220 (233)
T ss_pred ccCCCCEEEEEEeEccccHHHHHHHHHHHHcCCeEEEEEEEEE-ccccHHHHHHhcCC----CcccceEEEeeccc
Confidence 2368999999999999999999999999999998777766432 23466788887651 01256665555554
No 59
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=98.78 E-value=8.6e-08 Score=89.50 Aligned_cols=121 Identities=15% Similarity=0.153 Sum_probs=84.4
Q ss_pred HHHHHHHhcCC-CCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeC-Ccc-------------EEE-ee-cCCC-C
Q 020390 170 PLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREG-DKR-------------IVR-IK-EGNP-A 229 (327)
Q Consensus 170 ~~la~~l~~~~-~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~-~~~-------------~~~-~~-~~~v-~ 229 (327)
..+++.+...+ +.+.++|+++..+|++.|..+|. +.|+++++|..+. +.. +.. .+ ...+ +
T Consensus 114 ~~ig~~la~~~~~~~iD~VvgvetkGIpLA~avA~~L~vp~vivRK~~K~t~g~~vs~nY~sgs~~~ie~m~l~k~~l~~ 193 (268)
T TIGR01743 114 SKIGKILASVFAEREIDAVMTVATKGIPLAYAVASVLNVPLVIVRKDSKVTEGSTVSINYVSGSSNRIQTMSLAKRSLKT 193 (268)
T ss_pred HHHHHHHHHHhcCCCCCEEEEEccchHHHHHHHHHHHCCCEEEEEECCCCCCCCcEEEEEEcccCccceEEEEehhhCCC
Confidence 33444443332 23557999999999999998875 7888888887653 111 001 11 1233 6
Q ss_pred CCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCC
Q 020390 230 GCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCP 300 (327)
Q Consensus 230 gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~ 300 (327)
|++|+||||+++||+|+..+++.++++||.-+.+++.-.. .+..+++... +-.++..+.+.
T Consensus 194 G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlve~--~~~~~~l~~~--------~~SL~~~~~~~ 254 (268)
T TIGR01743 194 GSKVLIIDDFMKAGGTINGMINLLDEFDAEVAGIGVLIDN--EGVDEKLVDD--------YMSLLTLSNIN 254 (268)
T ss_pred cCEEEEEeeecccCHHHHHHHHHHHHCCCEEEEEEEEEEC--CCChHHcCCC--------ceEEEEEeecc
Confidence 9999999999999999999999999999998888875433 2344555443 56777766664
No 60
>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism]
Probab=98.77 E-value=4.4e-08 Score=83.54 Aligned_cols=114 Identities=22% Similarity=0.152 Sum_probs=86.0
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhh--cCCCeEEEeeeeeCCcc-------------EEEeecCCCC-CC
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKML--DHFPTVVCAKVREGDKR-------------IVRIKEGNPA-GC 231 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a--~~~~~~~~~K~R~~~~~-------------~~~~~~~~v~-gk 231 (327)
...++++++++.++.+..+|++.++.|.-+--.+| .+..++-++|.-+-.+. .+++..+-++ |.
T Consensus 44 lidlf~~h~~~~~~~~Id~iaGlEaRGFLFGP~iAlalG~~fVPiRK~gKLPG~~i~~~Y~lEYg~d~~Emq~~Ai~~g~ 123 (183)
T KOG1712|consen 44 LIDLFVDHYRETFEMKIDVIAGLEARGFLFGPSIALALGAGFVPIRKPGKLPGEVISESYELEYGEDRFEMQKGAIKPGQ 123 (183)
T ss_pred HHHHHHHHHHHHhcCcceEEEeeeecceecCcHHHHHhCCCeeecccCCCCCCceeEEEEeeecCccceeeeccccCCCC
Confidence 46778888887654557899999988887765554 36666666665443221 1222344554 89
Q ss_pred eEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcc
Q 020390 232 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK 281 (327)
Q Consensus 232 ~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~ 281 (327)
+|+||||++.||||+.+|.+.+.+.||.-+.+.|.-.+-.-++.++|..-
T Consensus 124 rvvvVDDllATGGTl~AA~~Ll~r~ga~vvE~~~vieL~~LkGr~kL~~~ 173 (183)
T KOG1712|consen 124 RVVVVDDLLATGGTLAAATELLERVGAEVVECACVIELPELKGREKLKGK 173 (183)
T ss_pred eEEEEechhhcCccHHHHHHHHHHhccEEEEEEEEEEccccCCccccCCC
Confidence 99999999999999999999999999999999999887666777887763
No 61
>PLN02440 amidophosphoribosyltransferase
Probab=98.76 E-value=3.5e-08 Score=99.54 Aligned_cols=97 Identities=16% Similarity=0.101 Sum_probs=65.8
Q ss_pred HHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeE--EEeeeeeCC------------ccE-EE--eecCCCCC
Q 020390 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTV--VCAKVREGD------------KRI-VR--IKEGNPAG 230 (327)
Q Consensus 170 ~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~--~~~K~R~~~------------~~~-~~--~~~~~v~g 230 (327)
..+++.|.+....+.++|++.-.++...|..++. +.|+. ++ |.|... ... .. .....++|
T Consensus 262 ~~~g~~La~~~~~~~d~vvpVP~s~~~~A~~la~~lgiP~~~~lv-r~ry~~rt~i~~~q~~r~~~~~~k~~~~~~~v~g 340 (479)
T PLN02440 262 LEFGEILATEIPVDCDVVIPVPDSGRVAALGYAAKLGVPFQQGLI-RSHYVGRTFIEPSQKIRDFSVKLKLNPVRSVLEG 340 (479)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHhCCCchhheE-EEeeccccccCcchhhhhhhheeeeecccccccC
Confidence 3466666654333445666655567778887775 45542 22 333321 101 11 11246899
Q ss_pred CeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEe
Q 020390 231 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTH 267 (327)
Q Consensus 231 k~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH 267 (327)
|+|+||||++|||.|+.++++.|+++||++|++++.-
T Consensus 341 k~VlLVDDiittGtTl~~i~~~L~~aGa~~V~v~v~~ 377 (479)
T PLN02440 341 KRVVVVDDSIVRGTTSSKIVRMLREAGAKEVHMRIAS 377 (479)
T ss_pred ceEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEC
Confidence 9999999999999999999999999999999999864
No 62
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.73 E-value=1.1e-07 Score=84.73 Aligned_cols=123 Identities=17% Similarity=0.193 Sum_probs=92.7
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCe--EEEeeeeeCC------------c-------------
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPT--VVCAKVREGD------------K------------- 218 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~--~~~~K~R~~~------------~------------- 218 (327)
+-..||+.|.+..+.+++++.+.-.||++-+..+++ +.++ .+++|--... .
T Consensus 10 AGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvliVrKiG~P~n~E~aiGAvae~g~~v~n~~~~~~~~ 89 (220)
T COG1926 10 AGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLIVRKIGAPGNPELAIGAVAEGGDVVLNYDVVRSLG 89 (220)
T ss_pred HHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEEEeecCCCCCchhceeeeccCCcEecchhhhhhcc
Confidence 567789999876434667888889999999888875 4443 3444432100 0
Q ss_pred ---------------cEE--------EeecCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChH
Q 020390 219 ---------------RIV--------RIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSW 275 (327)
Q Consensus 219 ---------------~~~--------~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~ 275 (327)
++. ..-..+.+||+||||||-+.||.||..+++.++++|+++|.+++ +++++++.
T Consensus 90 i~~~~i~~~~~~e~~El~rrr~~yr~~~~~~~~~g~~VIlVDDGiATGatm~aAi~~~r~~~~~~IviAV--PV~p~~a~ 167 (220)
T COG1926 90 IDDAYIEAAAARERKELLRRREAYRGGRPVPSLKGRTVILVDDGIATGATMKAAVRALRAKGPKEIVIAV--PVAPEDAA 167 (220)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEEeCCcchhHHHHHHHHHHHhcCCceEEEEc--ccCCHHHH
Confidence 000 00123679999999999999999999999999999999999988 78999999
Q ss_pred HHHhcccCCCccCCcCEEEEecCCC
Q 020390 276 ERFTLKNGENMENAFANFWITDSCP 300 (327)
Q Consensus 276 ~~l~~~~~~~~~~~~~~iv~Tnti~ 300 (327)
+.|... .|+|+|-++=.
T Consensus 168 ~~l~s~--------~D~vvc~~~P~ 184 (220)
T COG1926 168 AELESE--------ADEVVCLYMPA 184 (220)
T ss_pred HHHHhh--------cCeEEEEcCCc
Confidence 999887 48999887733
No 63
>PRK09213 pur operon repressor; Provisional
Probab=98.72 E-value=1.5e-07 Score=88.07 Aligned_cols=122 Identities=15% Similarity=0.120 Sum_probs=83.9
Q ss_pred HHHHHHHhcCC-CCCCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeC-CccE-------------EE-ee-cCCC-C
Q 020390 170 PLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREG-DKRI-------------VR-IK-EGNP-A 229 (327)
Q Consensus 170 ~~la~~l~~~~-~~~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~-~~~~-------------~~-~~-~~~v-~ 229 (327)
..+++.+.+.+ +.+.++|++|..+|++.|..+|. +.|+++++|..+. +... .. .+ ...+ +
T Consensus 116 ~~i~~~la~~~~~~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK~~K~~~G~~vs~~y~sgs~~~ie~m~L~~~~l~~ 195 (271)
T PRK09213 116 RKIGRIIASAFADKKIDAVMTVETKGIPLAYAVANYLNVPFVIVRRDSKVTEGSTVSINYVSGSSKRIETMSLSKRSLKE 195 (271)
T ss_pred HHHHHHHHHHhcccCCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCCCCcEEEEEEecccccceEEEEeHhhcCC
Confidence 34444443332 23457899999999999998875 7888888876542 1110 00 01 1233 6
Q ss_pred CCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCC
Q 020390 230 GCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 301 (327)
Q Consensus 230 gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~ 301 (327)
|++|+||||+++||+|+..+++.++++||.-+.+++.-..- +..+++... +..++..+.+..
T Consensus 196 G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlVd~~--~~~~~l~~~--------~~SL~~~~~vd~ 257 (271)
T PRK09213 196 GSRVLIVDDFMKAGGTINGMISLLKEFDAEVVGIGVLVETK--EPEERLVDD--------YVSLLKLSEVDE 257 (271)
T ss_pred cCEEEEEeeecccCHhHHHHHHHHHHCCCEEEEEEEEEECC--CChhhcCCc--------eEEEEEEehhcc
Confidence 99999999999999999999999999999998888754432 234444332 577777766643
No 64
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=98.72 E-value=1.4e-08 Score=103.02 Aligned_cols=50 Identities=22% Similarity=0.168 Sum_probs=44.0
Q ss_pred cCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCCh
Q 020390 225 EGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGS 274 (327)
Q Consensus 225 ~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a 274 (327)
...++||+|+||||++|||.|+.++++.|+++||++|+++++.+.+.-+.
T Consensus 353 ~~~v~gK~VlLVDDvitTGaTl~~~~~~L~~aGA~~V~v~v~ap~i~~pc 402 (501)
T PRK09246 353 RAEFKGKNVLLVDDSIVRGTTSEQIVQMAREAGAKKVYFASAAPPVRFPN 402 (501)
T ss_pred cccccCCeEEEEeccccccHHHHHHHHHHHHcCCCEEEEEEEccccccCc
Confidence 45689999999999999999999999999999999999999876544433
No 65
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=98.71 E-value=3.3e-08 Score=98.66 Aligned_cols=99 Identities=24% Similarity=0.284 Sum_probs=67.7
Q ss_pred HHHHHHhcCCCCC-CcEEEecCCChhHhHHhhhc--CCCeEE-EeeeeeCC----------ccE-EE--eecCCCCCCeE
Q 020390 171 LLKQRLHQLPDAN-NIVIAFPDDGAWKRFHKMLD--HFPTVV-CAKVREGD----------KRI-VR--IKEGNPAGCHV 233 (327)
Q Consensus 171 ~la~~l~~~~~~~-~~viV~pd~G~~~ra~~~a~--~~~~~~-~~K~R~~~----------~~~-~~--~~~~~v~gk~v 233 (327)
.+++.|++....+ +.++..||.|. ..|..++. +.|+.. ..|.|... ..+ .. .....++||+|
T Consensus 259 ~~G~~La~~~~~~~D~Vv~VPdsg~-~~A~~~a~~lgip~~~~l~k~r~~~rtfi~~~qr~~~~~~k~~~~~~~v~gk~V 337 (442)
T PRK08341 259 RMGVELARESPAEGDVVIAVPDSGR-TAALGFAHESGIPYMEGLIKNRYIGRTFIMPSGRELKVKLKLSPVREVINGKRV 337 (442)
T ss_pred HHHHHhhcccCCCCceEEEecCchH-HHHHHHHHHhCCCchheEEEeccccccccCcCchhhhheeeecccccccCCCEE
Confidence 4666676543332 34666678666 56776764 566542 45555310 111 11 22456899999
Q ss_pred EEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecC
Q 020390 234 VIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVF 270 (327)
Q Consensus 234 iivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~ 270 (327)
+||||+++||.|+.++++.|+++||++|.+.+..+.+
T Consensus 338 lLVDD~IttGtTl~~~~~~L~~aGAk~V~~~~~spp~ 374 (442)
T PRK08341 338 VLVDDSIVRGTTMKRIVKMLRDAGAREVHVRIASPPI 374 (442)
T ss_pred EEEeeeeccHHHHHHHHHHHHhcCCcEEEEEEcCCCc
Confidence 9999999999999999999999999999998755533
No 66
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=98.67 E-value=1.5e-07 Score=81.37 Aligned_cols=91 Identities=16% Similarity=0.124 Sum_probs=61.8
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcC--CCe-EEEeeeeeC--C-ccEEEeecCCCCCCeEEEEecccc
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDH--FPT-VVCAKVREG--D-KRIVRIKEGNPAGCHVVIVDDLVQ 241 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~--~~~-~~~~K~R~~--~-~~~~~~~~~~v~gk~viivDDii~ 241 (327)
....+|+.|.+. .++++++++..||+..+..++.. .+. .+++-.++. . +..........+||+|+||||+++
T Consensus 18 ~i~~la~~I~~~--~~~d~vvgv~~GG~~fa~~L~~~L~~~~v~~i~~ssY~~~~~~~~~~~~~~~~~gk~VLIVDDIiD 95 (156)
T PRK09177 18 DARALAWRLLPA--GQWKGIIAVTRGGLVPAAILARELGIRLVDTVCISSYDHDNQGELKVLKRAEGDGEGFLVVDDLVD 95 (156)
T ss_pred HHHHHHHHHHhh--CCCCEEEEEecCCeehHHHHHHHcCCCceeEEEEEEECCCcCCcEEEecCCCcCcCEEEEEeeeeC
Confidence 356677777654 24689999999999999998864 332 122222221 1 111111123468999999999999
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEE
Q 020390 242 SGGTLIECQKVLAAHGAAKVSAYV 265 (327)
Q Consensus 242 TG~Tl~~~~~~L~~~GA~~v~~~~ 265 (327)
||.|+..+.+.+++ ++.++
T Consensus 96 TG~Tl~~v~~~l~~-----v~~a~ 114 (156)
T PRK09177 96 TGGTARAVREMYPK-----AHFAT 114 (156)
T ss_pred CHHHHHHHHHHHhh-----CCEEE
Confidence 99999999999974 45555
No 67
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=98.63 E-value=1.1e-07 Score=96.10 Aligned_cols=99 Identities=21% Similarity=0.177 Sum_probs=68.5
Q ss_pred HHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEE-EeeeeeCC------c--------cE-EEeecCCCCCC
Q 020390 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVV-CAKVREGD------K--------RI-VRIKEGNPAGC 231 (327)
Q Consensus 170 ~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~-~~K~R~~~------~--------~~-~~~~~~~v~gk 231 (327)
..++++|++....+.++|++.-..++..|..++. +.|+.. ..|.|... . +. .......++||
T Consensus 299 ~~~G~~La~~~~~~~DvVv~VP~sg~~~A~g~A~~lgip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~~~~~~~gk 378 (500)
T PRK07349 299 QRLGQQLAKESPVDADLVIGVPDSGIPAAIGFSQASGIPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDVLAGK 378 (500)
T ss_pred HHHHHHHhhhcccCCcEEEEeccccHHHHHHHHHHHCCCchhceEEEeccCccccCCCHHHHHhhhheeeeccccccCCC
Confidence 4577778765444556777766667777777775 566532 23333321 0 01 11124457899
Q ss_pred eEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEee
Q 020390 232 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 268 (327)
Q Consensus 232 ~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~ 268 (327)
+|+||||+++||.|+.++++.|+++||+.|++....+
T Consensus 379 rVlLVDDvIttGtTl~~~~~~Lr~aGAkeV~~~i~sP 415 (500)
T PRK07349 379 RIIIVDDSIVRGTTSRKIVKALRDAGATEVHMRISSP 415 (500)
T ss_pred EEEEEeceeCCcHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 9999999999999999999999999999999885433
No 68
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.62 E-value=9.7e-08 Score=84.90 Aligned_cols=94 Identities=20% Similarity=0.156 Sum_probs=67.1
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CC-CeEEEeeeeeCC-------ccEEEeecCC-CCCCeEEEE
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HF-PTVVCAKVREGD-------KRIVRIKEGN-PAGCHVVIV 236 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~-~~~~~~K~R~~~-------~~~~~~~~~~-v~gk~viiv 236 (327)
....+|+.|.+. ++.+++|+++..||+.-++-+++ +. ++..+.-..... ..+.....-+ +.||+||||
T Consensus 15 ~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y~~~~~~~~~~~v~~~~~~d~l~GkkVLIV 93 (192)
T COG2236 15 LCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHYDETAERDGEAKVKYPITIDPLSGKKVLIV 93 (192)
T ss_pred HHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEehhhcccCCcceeecCccccccCCCeEEEE
Confidence 356788888765 57889999999999998887775 32 433332222211 1122223334 899999999
Q ss_pred eccccChhhHHHHHHHHHHcCCCeEE
Q 020390 237 DDLVQSGGTLIECQKVLAAHGAAKVS 262 (327)
Q Consensus 237 DDii~TG~Tl~~~~~~L~~~GA~~v~ 262 (327)
|||.|||.||..+.+.|++..+..++
T Consensus 94 DDI~DTG~Tl~~a~~~l~~~~p~e~r 119 (192)
T COG2236 94 DDIVDTGETLELALEELKKLAPAEVR 119 (192)
T ss_pred ecccCchHhHHHHHHHHHhhCchhhh
Confidence 99999999999999999996666664
No 69
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=98.61 E-value=1.4e-07 Score=94.44 Aligned_cols=145 Identities=17% Similarity=0.125 Sum_probs=81.5
Q ss_pred HHHHHHHhcCCCCCCcEEEe-cCCChhHhHHhhhc--CCCeEE-EeeeeeC-------C-------cc-EEEeecCCCCC
Q 020390 170 PLLKQRLHQLPDANNIVIAF-PDDGAWKRFHKMLD--HFPTVV-CAKVREG-------D-------KR-IVRIKEGNPAG 230 (327)
Q Consensus 170 ~~la~~l~~~~~~~~~viV~-pd~G~~~ra~~~a~--~~~~~~-~~K~R~~-------~-------~~-~~~~~~~~v~g 230 (327)
..+++.|++....+.++|++ |+. +...|..+++ +.++.. ..|.|.. . .+ .+......++|
T Consensus 260 ~~~g~~La~~~~~~~D~Vv~VP~s-g~~~A~~la~~lgip~~~~l~r~~~~~r~~i~~~q~~R~~~v~~k~~~~~~~~~g 338 (442)
T TIGR01134 260 KRMGEKLARESPVEADVVIPVPDS-GRSAALGFAQASGIPYREGLIKNRYVGRTFIMPTQELRELSVRLKLNPIREVFRG 338 (442)
T ss_pred HHHHHHHHHhcCCCCEEEEEccCC-HHHHHHHHHHHhCCCchHHeEEeccccccccCCCHHHHHHHHhhhcccccccCCC
Confidence 34666666543334444444 554 5666777765 555432 2233221 0 00 01122456899
Q ss_pred CeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCC
Q 020390 231 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKA 310 (327)
Q Consensus 231 k~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~ 310 (327)
|+|+||||+++||.|+.++++.|+++||++|.+++..+.+.-++.--+.-.. -++++..++-.....+.-..+
T Consensus 339 k~v~lvDD~ittG~T~~~~~~~l~~~ga~~v~~~~~spp~~~pc~yg~d~~~-------~~el~~~~~~~~~i~~~~~~~ 411 (442)
T TIGR01134 339 KRVVLVDDSIVRGTTSRQIVKMLRDAGAKEVHVRIASPPIRYPCYYGIDMPT-------REELIANGRTVEEIAKEIGAD 411 (442)
T ss_pred CEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEEccCCccCCcccccCCCC-------HHHHhhcCCCHHHHHHHhCCC
Confidence 9999999999999999999999999999999988763322222222221100 122332222111111112356
Q ss_pred CeEEEechHHHH
Q 020390 311 PFEVLSLAGSIA 322 (327)
Q Consensus 311 k~~v~~va~~la 322 (327)
-+.++++..++.
T Consensus 412 ~l~~~~~~~l~~ 423 (442)
T TIGR01134 412 SLAYLSLEGLKE 423 (442)
T ss_pred EEEEecHHHHHH
Confidence 788888887764
No 70
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=98.60 E-value=1.1e-07 Score=95.64 Aligned_cols=102 Identities=19% Similarity=0.162 Sum_probs=66.1
Q ss_pred HHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEE-EeeeeeCC--------------cc-EEEeecCCCCCCe
Q 020390 171 LLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVV-CAKVREGD--------------KR-IVRIKEGNPAGCH 232 (327)
Q Consensus 171 ~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~-~~K~R~~~--------------~~-~~~~~~~~v~gk~ 232 (327)
.+++.|++....+.++|++.-..+..-|..++. +.|+.. ..|.|... .+ .+......++||+
T Consensus 271 ~~G~~La~~~~~~~D~vv~VP~s~~~~A~~~a~~~gip~~~~lik~~~~~rt~~~~~~~~R~~~v~~~f~~~~~~i~gk~ 350 (471)
T PRK06781 271 NMGKRLAAEAPIEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQELREQGVKMKLSAVRGVVEGKR 350 (471)
T ss_pred HHHHHHhhhCCCCCcEEEEcChhHHHHHHHHHHHhCCCcccceEEEccCCCCCcCCCHHHHHHHHhcceeccccccCCce
Confidence 466667665333445555543345555666654 555432 22223211 00 1222345689999
Q ss_pred EEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCC
Q 020390 233 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPK 272 (327)
Q Consensus 233 viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~ 272 (327)
|+||||++|||.|+.++++.|+++||++|++++..+.+.-
T Consensus 351 VlLVDDvittGtTl~~~~~~Lk~aGA~eV~v~i~sPpi~~ 390 (471)
T PRK06781 351 VVMIDDSIVRGTTSKRIVRMLREAGATEVHVRIASPPLKY 390 (471)
T ss_pred EEEEeceeccchHHHHHHHHHHHcCCcEEEEEECCCCccC
Confidence 9999999999999999999999999999999987664433
No 71
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=98.55 E-value=1.8e-07 Score=94.04 Aligned_cols=104 Identities=20% Similarity=0.153 Sum_probs=67.1
Q ss_pred HHHHHHhcCCCCCCcEEEecCCChhHhHHhhhc--CCCeEE-EeeeeeCC--------------cc-EEEeecCCCCCCe
Q 020390 171 LLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLD--HFPTVV-CAKVREGD--------------KR-IVRIKEGNPAGCH 232 (327)
Q Consensus 171 ~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~--~~~~~~-~~K~R~~~--------------~~-~~~~~~~~v~gk~ 232 (327)
.+.+.|++....+.++|++.-..+...|..++. +.|+.. ..|.|... .+ .+......++||+
T Consensus 271 ~~G~~La~~~~~~~D~VvpVP~s~~~~A~gla~~~gip~~~~lik~~~~~Rt~i~~~~~~R~~nv~~~f~~~~~~v~gk~ 350 (475)
T PRK07631 271 NLGKRLALEAPVEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVKMKLSPVRGVVEGKR 350 (475)
T ss_pred HHHHHHHhhCCCCCcEEEEechhHHHHHHHHHHHHCCCcccceEEEecCCCCCcCCCHHHHHHHHhhhhhhcccccCCce
Confidence 466777664334445555533345556666664 555422 22322211 00 1122245689999
Q ss_pred EEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCCh
Q 020390 233 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGS 274 (327)
Q Consensus 233 viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a 274 (327)
|+||||+++||.|+.++++.|+++||++|++.+..+.+.-+.
T Consensus 351 VlLVDDsittGtTl~~~~~~L~~aGA~eV~v~~~sPpi~~pc 392 (475)
T PRK07631 351 VVMVDDSIVRGTTSRRIVTMLREAGATEVHVRISSPPITHPC 392 (475)
T ss_pred EEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEEeCCCccCCc
Confidence 999999999999999999999999999999997766444333
No 72
>KOG3367 consensus Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.54 E-value=3.5e-07 Score=78.86 Aligned_cols=104 Identities=18% Similarity=0.258 Sum_probs=76.1
Q ss_pred cHHHHHHHHhcCCCCCCcEEEecCCChhHhHHhhhcC---------CC--eEEEeeeeeCCccE---EEeec----CCCC
Q 020390 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDH---------FP--TVVCAKVREGDKRI---VRIKE----GNPA 229 (327)
Q Consensus 168 ~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~---------~~--~~~~~K~R~~~~~~---~~~~~----~~v~ 229 (327)
..+.||+-+.+..+..+.++++..+|+.++.+++.+. .| +.+++-+.+.+... +.... .++.
T Consensus 45 r~~rlakDi~~~~g~~~i~~lcVlkG~ykF~adLve~l~n~~s~~~~pmtvDFIR~kSY~n~~stg~iqiig~d~l~~lt 124 (216)
T KOG3367|consen 45 RVERLAKDIMKEIGNKPIIFLCVLKGGYKFFADLVERLKNRNSDRPLPMTVDFIRAKSYCNDQSTGDIQIIGGDDLSTLT 124 (216)
T ss_pred HHHHhhhhhhhccCCCceEEEEEecchhHHHHHHHHHHhhcccCCCcceeeeeeehhhhcCCcccCCceeecCCCHHHhc
Confidence 4677888887765667778899999999998876532 23 23444333333211 11222 2479
Q ss_pred CCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCCh
Q 020390 230 GCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGS 274 (327)
Q Consensus 230 gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a 274 (327)
||+|+|||||++||.||......+++.+++.|.++. ++++..
T Consensus 125 gK~VliVeDIvdTGrTl~~Lls~~~~~k~~~v~vas---LL~Krt 166 (216)
T KOG3367|consen 125 GKNVLIVEDIVDTGRTLSTLLSHMKAYKPSMVKVAS---LLVKRT 166 (216)
T ss_pred CCcEEEEEeeccccchHHHHHHHHHhcCccceeeee---eccccc
Confidence 999999999999999999999999999999999987 666654
No 73
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=98.34 E-value=1.3e-06 Score=88.05 Aligned_cols=44 Identities=25% Similarity=0.305 Sum_probs=39.8
Q ss_pred CCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeec
Q 020390 226 GNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGV 269 (327)
Q Consensus 226 ~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~ 269 (327)
..++||+|+||||+++||.|+.++++.|+++||++|.+....+.
T Consensus 352 ~~i~gk~VlLVDDsittGtTl~~~~~~L~~aGak~V~~ri~sPp 395 (474)
T PRK06388 352 EVISGKRIVLVDDSIVRGNTMRFIVKIMRKYGAKEVHVRIGSPH 395 (474)
T ss_pred ccccCceEEEEeCeECcHHHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 35789999999999999999999999999999999999876553
No 74
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=98.28 E-value=2.6e-05 Score=74.54 Aligned_cols=137 Identities=17% Similarity=0.141 Sum_probs=100.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeec-CCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhh
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNF-ADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPR 93 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F-~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~ 93 (327)
..+.+=...+...+|..+|+.|| .++..+...++ ++||.+. ..+.++++|++|+|+.++.+... .++..++++++
T Consensus 160 ~~viv~pd~g~~~~A~~lA~~Lg-~~~~~i~k~r~~~~~~~~~-~~~~~~v~g~~vliVDDii~tG~--Tl~~a~~~l~~ 235 (308)
T TIGR01251 160 NPVVVSPDAGGVERAKKVADALG-CPLAIIDKRRISATNEVEV-MNLVGDVEGKDVVIVDDIIDTGG--TIAKAAEILKS 235 (308)
T ss_pred CCEEEEECCchHHHHHHHHHHhC-CCEEEEEEEecCCCCEEEE-EecccccCCCEEEEEccccCCHH--HHHHHHHHHHh
Confidence 44555555667789999999996 99998988898 8887443 34467899999999999988755 35678899999
Q ss_pred cCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHH
Q 020390 94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK 173 (327)
Q Consensus 94 ~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la 173 (327)
.|+++|.++.++- ...+ ..+.++.+ +|+|+|++.|.|... .+|. ++..+ +..++||
T Consensus 236 ~ga~~v~~~~th~--------v~~~-----~a~~~l~~------~~~~~iv~tdt~~~~--~~~~-~~~~v--~va~~la 291 (308)
T TIGR01251 236 AGAKRVIAAATHG--------VFSG-----PAIERIAN------AGVEEVIVTNTIPHE--KHKP-KVSVI--SVAPLIA 291 (308)
T ss_pred cCCCEEEEEEEee--------ecCc-----HHHHHHHh------CCCCEEEEeCCCCcc--ccCC-CcEEE--EhHHHHH
Confidence 9999999999831 1112 22355655 378999999999764 2433 33333 4689999
Q ss_pred HHHhcC
Q 020390 174 QRLHQL 179 (327)
Q Consensus 174 ~~l~~~ 179 (327)
+.|.+.
T Consensus 292 ~~i~~~ 297 (308)
T TIGR01251 292 EAIRRI 297 (308)
T ss_pred HHHHHH
Confidence 999775
No 75
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=98.19 E-value=3.3e-06 Score=85.73 Aligned_cols=98 Identities=19% Similarity=0.157 Sum_probs=63.3
Q ss_pred HHHHHHhcCCCCCCcEEEe-cCCChhHhHHhhhc--CCCeEE-EeeeeeCC---------c--cEEEe----ecCCCCCC
Q 020390 171 LLKQRLHQLPDANNIVIAF-PDDGAWKRFHKMLD--HFPTVV-CAKVREGD---------K--RIVRI----KEGNPAGC 231 (327)
Q Consensus 171 ~la~~l~~~~~~~~~viV~-pd~G~~~ra~~~a~--~~~~~~-~~K~R~~~---------~--~~~~~----~~~~v~gk 231 (327)
.+.+.|.+....+.++|++ |+.| ..-|..++. +.++.. ..|.|... . ..+.. ....++||
T Consensus 290 ~~G~~La~~~~~~~D~VvpVP~sG-~~~A~g~a~~~gip~~~~l~kn~~~grtfi~~~q~~r~~~~r~k~~~~~~~~~gk 368 (510)
T PRK07847 290 EIGRRLAREHPVEADLVIPVPESG-TPAAVGYAQESGIPFGQGLVKNAYVGRTFIQPSQTIRQLGIRLKLNPLREVIRGK 368 (510)
T ss_pred HHHHHHHhhCCCCCeEEEeccCch-HHHHHHHHHHhCCChhhceEeecccccCccCcchhhhhhceeeecCccccccCCC
Confidence 4666776653344455555 7764 555666654 455422 22322110 0 01111 13347999
Q ss_pred eEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeec
Q 020390 232 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGV 269 (327)
Q Consensus 232 ~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~ 269 (327)
+|+||||+++||.|+.++++.|+++||++|.+....+.
T Consensus 369 ~vllVDD~ittG~T~~~~~~~L~~~ga~~v~~ri~sPp 406 (510)
T PRK07847 369 RLVVVDDSIVRGNTQRALVRMLREAGAAEVHVRISSPP 406 (510)
T ss_pred EEEEEecccCchHHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 99999999999999999999999999999998865543
No 76
>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=97.99 E-value=2.9e-05 Score=69.63 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=72.0
Q ss_pred CcEEEecCCChhHhHHhhhcCCC---eEEEeeeeeCCc-cEE---EeecCCCCCCeEEEEeccccChhhHHHHHHHHHHc
Q 020390 184 NIVIAFPDDGAWKRFHKMLDHFP---TVVCAKVREGDK-RIV---RIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAH 256 (327)
Q Consensus 184 ~~viV~pd~G~~~ra~~~a~~~~---~~~~~K~R~~~~-~~~---~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~ 256 (327)
+.++|+....|..+...+.+.+| +..+--+|..+. +.. ..+..+.+++.++|+|.|+.||+|+..|++.|+++
T Consensus 71 ~i~~V~ILRAGl~m~~gl~~~~P~a~vG~ig~~Rdeet~~p~~yy~KLP~~~~~~~viv~DPMLATG~s~i~ai~~L~~~ 150 (210)
T COG0035 71 KIVIVPILRAGLGMVEGLLKLIPSARVGHIGIYRDEETLEPVLYYEKLPEDIDERTVIVLDPMLATGGSAIAAIDLLKKR 150 (210)
T ss_pred cEEEEEEeeccccHHHHHHHhCCcceEEEEEEEecCccCceehhHHhCCCcccCCeEEEECchhhccHhHHHHHHHHHHh
Confidence 36777777777776666554443 333444566543 211 11355899999999999999999999999999999
Q ss_pred -CCCeEEEEEEeecCCCChHHHHhccc
Q 020390 257 -GAAKVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 257 -GA~~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
|+++|.++|. +-++++++++.++.
T Consensus 151 G~~~~I~~v~~--vAapeGi~~v~~~~ 175 (210)
T COG0035 151 GGPKNIKVVSL--VAAPEGIKAVEKAH 175 (210)
T ss_pred CCCceEEEEEE--EecHHHHHHHHHhC
Confidence 9999999886 55688999999864
No 77
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=97.97 E-value=4.6e-05 Score=68.81 Aligned_cols=97 Identities=13% Similarity=0.191 Sum_probs=71.3
Q ss_pred CcEEEecCCChhHhHHhhhc---CCCeEEEeeeeeCCc-c-EE--EeecCCCCCCeEEEEeccccChhhHHHHHHHHHHc
Q 020390 184 NIVIAFPDDGAWKRFHKMLD---HFPTVVCAKVREGDK-R-IV--RIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAH 256 (327)
Q Consensus 184 ~~viV~pd~G~~~ra~~~a~---~~~~~~~~K~R~~~~-~-~~--~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~ 256 (327)
+.++|+...+|..+...+.+ +.++..+.=+|+.+. . .. ..+..++.+++|+|+|.|++||+|+..+++.|++.
T Consensus 68 ~i~~V~IlRaG~~m~~~~~~~~p~a~~g~i~i~r~~~t~~p~~~y~~LP~~i~~~~VillDpmlaTG~s~~~ai~~L~~~ 147 (207)
T PF14681_consen 68 KICIVPILRAGLPMLEGFREVFPDARVGHIGIQRDEETLEPVLYYNKLPEDIENRKVILLDPMLATGGSAIAAIEILKEH 147 (207)
T ss_dssp CEEEEEETTTHHHHHHHHHHHSTTSEEEEEEEEEETTTSSEEEEEEE--TTGTTSEEEEEESEESSSHHHHHHHHHHHHT
T ss_pred cEEEEEEeCCcHHHHHHHHHhCCCcceEEEEEEEcCCccceeeeHhhCCCCccCCEEEEEeccccchhhHHHHHHHHHHc
Confidence 57888888888877666543 444555545565543 2 11 23467789999999999999999999999999999
Q ss_pred CC--CeEEEEEEeecCCCChHHHHhccc
Q 020390 257 GA--AKVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 257 GA--~~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
|+ ++|.+++. +-++++++++.+..
T Consensus 148 G~~~~~I~~v~~--ias~~Gl~~l~~~~ 173 (207)
T PF14681_consen 148 GVPEENIIIVSV--IASPEGLERLLKAF 173 (207)
T ss_dssp TG-GGEEEEEEE--EEEHHHHHHHHHHS
T ss_pred CCCcceEEEEEE--EecHHHHHHHHHhC
Confidence 87 57777775 44678899998763
No 78
>PLN02541 uracil phosphoribosyltransferase
Probab=97.79 E-value=0.00011 Score=68.02 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=65.8
Q ss_pred cEEEecCCChhHhHHhhhc---CCCeEEEeeeeeCCc-cE-EE--eecCCCC-CCeEEEEeccccChhhHHHHHHHHHHc
Q 020390 185 IVIAFPDDGAWKRFHKMLD---HFPTVVCAKVREGDK-RI-VR--IKEGNPA-GCHVVIVDDLVQSGGTLIECQKVLAAH 256 (327)
Q Consensus 185 ~viV~pd~G~~~ra~~~a~---~~~~~~~~K~R~~~~-~~-~~--~~~~~v~-gk~viivDDii~TG~Tl~~~~~~L~~~ 256 (327)
.++|+....|..+...+.+ +.....+.-+|+..+ .. .. .+..++. +++|+|+|||+.||+|+..+++.|++.
T Consensus 104 i~~V~ILRAGl~m~~g~~~~~P~a~vg~i~~~rd~~t~e~~~yy~kLP~~i~~~~~VlllDpmLATGgS~~~ai~~L~~~ 183 (244)
T PLN02541 104 VAVVPILRAGLVLLEHASSVLPATKTYHLGFVRDEETLQPSMYLNKLPDKFPEGSRVLVVDPMLATGGTIVAAIDELVSR 183 (244)
T ss_pred EEEEeEeCCcHhHHHHHHhhCCCCeeEEEEEEEcccccceEEeeccCchhcCCCCEEEEECcchhhhHHHHHHHHHHHHc
Confidence 6677777777766555443 333333333454322 11 11 1345565 679999999999999999999999999
Q ss_pred CCC--eEEEEEEeecCCCChHHHHhccc
Q 020390 257 GAA--KVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 257 GA~--~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
|+. +|.+++. +-++.+++++.+..
T Consensus 184 Gv~~~~I~~v~~--ias~~Gl~~i~~~f 209 (244)
T PLN02541 184 GASVEQIRVVCA--VAAPPALKKLSEKF 209 (244)
T ss_pred CCCcccEEEEEE--EECHHHHHHHHHHC
Confidence 998 6776664 56778999998873
No 79
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=97.69 E-value=0.00031 Score=60.52 Aligned_cols=97 Identities=18% Similarity=0.213 Sum_probs=66.5
Q ss_pred HHHHHHHhcC-CCCCCcEEEecCCChhHhHHhhhc------C--CCeEE--EeeeeeC----C--ccE--EEeecCCCCC
Q 020390 170 PLLKQRLHQL-PDANNIVIAFPDDGAWKRFHKMLD------H--FPTVV--CAKVREG----D--KRI--VRIKEGNPAG 230 (327)
Q Consensus 170 ~~la~~l~~~-~~~~~~viV~pd~G~~~ra~~~a~------~--~~~~~--~~K~R~~----~--~~~--~~~~~~~v~g 230 (327)
..++.+|.+. -+.++.++++.-.+|+..|..++. + .|+.. +.-.|+. + ... ......++.|
T Consensus 17 tRia~eIiErnk~~~~~vlvGIktrGv~lA~rl~~~i~~~Eg~~vp~g~lDIt~yRDDl~~~~~~~p~~~~t~~~~di~~ 96 (179)
T COG2065 17 TRIAHEIIERNKGLDNLVLVGIKTRGVPLAERLAERIEELEGIEVPVGELDITLYRDDLTQKGPLRPQAKTTILPFDITG 96 (179)
T ss_pred HHHHHHHHHHhCCCCceEEEeEecCCHHHHHHHHHHHHHHhCCCCCeeeEEeEEeechhhhcCccCCcccCccCcccccC
Confidence 3456666443 246789999999999998887763 2 23221 1223321 1 000 1224668999
Q ss_pred CeEEEEeccccChhhHHHHHHHHHHcCC-CeEEEEEE
Q 020390 231 CHVVIVDDLVQSGGTLIECQKVLAAHGA-AKVSAYVT 266 (327)
Q Consensus 231 k~viivDDii~TG~Tl~~~~~~L~~~GA-~~v~~~~t 266 (327)
|+|++|||++-||.|+.+|.+.|...|- ..|..+|.
T Consensus 97 k~VILVDDVLytGRTIRAAldal~d~GRPa~I~LavL 133 (179)
T COG2065 97 KRVILVDDVLYTGRTIRAALDALVDYGRPAKIQLAVL 133 (179)
T ss_pred CEEEEEeeecccCccHHHHHHHHHhcCCcceEEEEEE
Confidence 9999999999999999999999999884 46777763
No 80
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=97.60 E-value=0.00012 Score=72.38 Aligned_cols=98 Identities=20% Similarity=0.164 Sum_probs=63.2
Q ss_pred HHHHHHHhcCCCCCCcEEEe-cCCChhHhHHhhhc--CCCeEE-EeeeeeCCccE-----------E----EeecCCCCC
Q 020390 170 PLLKQRLHQLPDANNIVIAF-PDDGAWKRFHKMLD--HFPTVV-CAKVREGDKRI-----------V----RIKEGNPAG 230 (327)
Q Consensus 170 ~~la~~l~~~~~~~~~viV~-pd~G~~~ra~~~a~--~~~~~~-~~K~R~~~~~~-----------~----~~~~~~v~g 230 (327)
..+.+.|.+....+-++|++ ||. +..-|..+++ +.|+.. .-|.|+-.... + ......++|
T Consensus 270 ~~mG~~La~e~~~eaDvVipVPDS-g~~aAig~A~~sGiPy~~GliKNrYvgRTFI~P~q~~R~~~Vr~KLnpvr~~v~G 348 (470)
T COG0034 270 KRMGEKLAEEIPVEADVVIPVPDS-GRPAAIGYARASGIPYEEGLIKNRYVGRTFIMPTQELREKGVRLKLNPVREVVKG 348 (470)
T ss_pred HHHHHHHHHhCCccccEEEecCCC-ChHHHHHHHHHhCCchhhccccccccceeeeCCcHHHHHhhhhhhcCchHHHhCC
Confidence 34666776643334455554 554 4444444443 555422 22444422110 1 122456899
Q ss_pred CeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEee
Q 020390 231 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 268 (327)
Q Consensus 231 k~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~ 268 (327)
|+|++|||-|-.|.|+.+.++.|+++||++|++..-.+
T Consensus 349 KrVvlVDDSIVRGTTsr~IV~mlReAGAkEVHvriasP 386 (470)
T COG0034 349 KRVVLVDDSIVRGTTSRRIVQMLREAGAKEVHVRIASP 386 (470)
T ss_pred CeEEEEccccccCccHHHHHHHHHHhCCCEEEEEecCC
Confidence 99999999999999999999999999999999986444
No 81
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=97.11 E-value=0.0011 Score=64.19 Aligned_cols=42 Identities=33% Similarity=0.361 Sum_probs=39.0
Q ss_pred ecCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEE
Q 020390 224 KEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 265 (327)
Q Consensus 224 ~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~ 265 (327)
+...++||+|+||||-|--|.|+....+.||++||+.|+.-.
T Consensus 350 l~~~~~GKrvvlVDDSIVRGtTs~~IVkmlreaGAkeVh~ri 391 (474)
T KOG0572|consen 350 LRQNFEGKRVVLVDDSIVRGTTSSPIVKMLREAGAKEVHIRI 391 (474)
T ss_pred chhhcCCceEEEEecceeccCchHHHHHHHHHcCCcEEEEEe
Confidence 456799999999999999999999999999999999998864
No 82
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=96.88 E-value=0.044 Score=52.37 Aligned_cols=133 Identities=16% Similarity=0.086 Sum_probs=91.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhc
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRL 94 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~ 94 (327)
..+.+-.......+|..+|+.+| +++.-+.-.+..+++.++......++.|++|+|+-.+.+-..- +.-.++.|++.
T Consensus 161 ~~vVVsPd~g~~~~a~~la~~l~-~~~~~~~K~R~~~~~~~~~~~~~~~v~Gr~vIIVDDIidTG~T--l~~aa~~Lk~~ 237 (301)
T PRK07199 161 RPLLIGPDEESEQWVAAVAERAG-APHAVLRKTRHGDRDVEISLPDAAPWAGRTPVLVDDIVSTGRT--LIEAARQLRAA 237 (301)
T ss_pred CcEEEEeCCChHHHHHHHHHHhC-CCEEEEEEEecCCCeEEEEeccCcccCCCEEEEEecccCcHHH--HHHHHHHHHHC
Confidence 44555555667789999999996 8887777677666654444333467899999999998766443 23577899999
Q ss_pred CccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHHH
Q 020390 95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQ 174 (327)
Q Consensus 95 ~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la~ 174 (327)
||++|.++.-+.=.+ .....++.. +|+++|++-|-+... .++ .+.++++|+
T Consensus 238 GA~~V~~~~tHgvfs-------------~~a~~~l~~------~~i~~iv~Tdti~~~------~~~----~sva~lla~ 288 (301)
T PRK07199 238 GAASPDCVVVHALFA-------------GDAYSALAA------AGIARVVSTDTVPHP------SNA----ISLAPLLAE 288 (301)
T ss_pred CCcEEEEEEEeeeCC-------------hHHHHHHHh------CCCCEEEEeCCccCC------CCE----EehHHHHHH
Confidence 999999887543222 222334434 378999999976421 111 146899999
Q ss_pred HHhcC
Q 020390 175 RLHQL 179 (327)
Q Consensus 175 ~l~~~ 179 (327)
.|.+.
T Consensus 289 ~i~~~ 293 (301)
T PRK07199 289 ALRRE 293 (301)
T ss_pred HHHHH
Confidence 99775
No 83
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=96.57 E-value=0.088 Score=49.86 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=85.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhc
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRL 94 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~ 94 (327)
..+.+-.......+|..+|+.|| +++..+.-.+...++..+. ....++.|++|+|+-.+.+-..-| .-.+++|++.
T Consensus 155 ~~vvv~pd~Ga~~~a~~lA~~l~-~~~~~i~k~r~~~~~~~~~-~~~~~v~Gk~VlIVDDIi~TG~Tl--~~aa~~Lk~~ 230 (285)
T PRK00934 155 DPLVLAPDKGALELAKEAAEILG-CEYDYLEKTRISPTEVEIA-PKNLDVKGKDVLIVDDIISTGGTM--ATAIKILKEQ 230 (285)
T ss_pred CCEEEEeCCchHHHHHHHHHHhC-CCEEEEEEEecCCCeEEEe-ccccccCCCEEEEEcCccccHHHH--HHHHHHHHHC
Confidence 34555555667899999999996 8887666666665542222 123478999999999887664332 2467889999
Q ss_pred CccceeEeecC--CCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHH
Q 020390 95 FVASFTLVLPF--FPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL 172 (327)
Q Consensus 95 ~a~~i~~viPY--~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~l 172 (327)
||+++.++.-+ +.- ..+-++.. +|+|+|++.|-+.... .+. +.+++|
T Consensus 231 GA~~V~~~~~H~i~~~---------------~a~~~l~~------~~i~~i~~tnti~~~~------~~~----~va~~l 279 (285)
T PRK00934 231 GAKKVYVACVHPVLVG---------------DAILKLYN------AGVDEIIVTDTLESEV------SKI----SVAPLI 279 (285)
T ss_pred CCCEEEEEEEeeccCc---------------HHHHHHHh------CCCCEEEEcCCCCCCc------eEE----EcHHHH
Confidence 99999888753 221 11223333 3789999999875321 111 468899
Q ss_pred HHHHh
Q 020390 173 KQRLH 177 (327)
Q Consensus 173 a~~l~ 177 (327)
|+.|+
T Consensus 280 a~~i~ 284 (285)
T PRK00934 280 ADLLK 284 (285)
T ss_pred HHHHh
Confidence 98874
No 84
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=96.38 E-value=0.19 Score=48.46 Aligned_cols=140 Identities=16% Similarity=0.110 Sum_probs=90.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhh
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPR 93 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~ 93 (327)
+..+.+-.-.+....|+.+|+.||+.++.-+.-.+..+++.. ...+..+|.|++|+|+-.+.+-..- +.-.+++|++
T Consensus 166 ~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~~~-~~~~~gdv~Gr~viIVDDIidTG~T--l~~aa~~Lk~ 242 (319)
T PRK04923 166 DNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVAT-VMNIIGDVQGKTCVLVDDLVDTAGT--LCAAAAALKQ 242 (319)
T ss_pred CCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCCceE-EEecccCCCCCEEEEEecccCchHH--HHHHHHHHHH
Confidence 344556666778899999999995356665555554444322 2344578999999999998765433 3457889999
Q ss_pred cCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCcc--ccccccCCcccccccccHHH
Q 020390 94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHAL--QERFYFSDHVLPLFETGIPL 171 (327)
Q Consensus 94 ~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~--~~~gffn~~v~~l~~~~~~~ 171 (327)
.||++|.++.-+.=++. ..+-++.+ +|+++|++-|-... ..+.. ..+..+ +.+++
T Consensus 243 ~GA~~V~~~~THgvfs~-------------~a~~~l~~------s~i~~iv~Tdtip~~~~~~~~--~k~~~i--sva~l 299 (319)
T PRK04923 243 RGALKVVAYITHPVLSG-------------PAVDNINN------SQLDELVVTDTIPLSEAARAC--AKIRQL--SVAEL 299 (319)
T ss_pred CCCCEEEEEEECcccCc-------------hHHHHHhh------CCCCEEEEeCCccCchhhccc--CCeEEE--EhHHH
Confidence 99999998876643332 12234433 37899999996532 11111 111111 46889
Q ss_pred HHHHHhcC
Q 020390 172 LKQRLHQL 179 (327)
Q Consensus 172 la~~l~~~ 179 (327)
||+.|.+.
T Consensus 300 la~~i~~~ 307 (319)
T PRK04923 300 LAETIRRI 307 (319)
T ss_pred HHHHHHHH
Confidence 99999765
No 85
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=96.09 E-value=0.36 Score=46.21 Aligned_cols=141 Identities=13% Similarity=0.081 Sum_probs=89.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCC--CceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHh
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFAD--GWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYAL 91 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~d--GE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al 91 (327)
+..+.+-.-.....+|+.+|+.|+..++.-+...+..+ |+. ....+..++.|++|+||-.+.+-..- +...++.|
T Consensus 148 ~~~vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~~~~~-~~~~~~~dv~gr~viIVDDIi~TG~T--l~~aa~~L 224 (304)
T PRK03092 148 DNVTVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPTVPNQV-VANRVVGDVEGRTCVLVDDMIDTGGT--IAGAVRAL 224 (304)
T ss_pred CCcEEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccCCCCce-EEEecCcCCCCCEEEEEccccCcHHH--HHHHHHHH
Confidence 34455555567778999999999437777777666543 332 23455678999999999998765433 23567899
Q ss_pred hhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHH
Q 020390 92 PRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL 171 (327)
Q Consensus 92 ~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~ 171 (327)
++.|+++|.++.-+.=.+. ..+-++.+ +|++.|++.|-+.....-. ...+..+ +.+++
T Consensus 225 k~~Ga~~I~~~~tH~v~~~-------------~a~~~l~~------~~~~~i~~t~tip~~~~~~-~~~~~~~--sva~~ 282 (304)
T PRK03092 225 KEAGAKDVIIAATHGVLSG-------------PAAERLKN------CGAREVVVTDTLPIPEEKR-FDKLTVL--SIAPL 282 (304)
T ss_pred HhcCCCeEEEEEEcccCCh-------------HHHHHHHH------CCCCEEEEeeeeccchhhc-CCCeEEE--EhHHH
Confidence 9999999998884322211 12234444 3789999999653211000 0111111 46889
Q ss_pred HHHHHhcC
Q 020390 172 LKQRLHQL 179 (327)
Q Consensus 172 la~~l~~~ 179 (327)
+|+.|.+.
T Consensus 283 la~~i~~~ 290 (304)
T PRK03092 283 LARAIREV 290 (304)
T ss_pred HHHHHHHH
Confidence 99998765
No 86
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=95.90 E-value=0.27 Score=47.49 Aligned_cols=136 Identities=13% Similarity=0.036 Sum_probs=86.2
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhcC
Q 020390 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLF 95 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~~ 95 (327)
.+.+-.-.....+|+.+|+.|| +++.-+...+ .+.+. ....+..+|.|++|+||..+.+-..- +...+++|++.|
T Consensus 171 ~vvV~pd~Ga~~~A~~la~~L~-~~~~~~~~~r-~~~~~-~~~~i~gdV~gk~viIVDDIidTG~T--l~~aa~~Lk~~G 245 (323)
T PRK02458 171 VVVVSPKNSGIKRARSLAEYLD-APIAIIDYAQ-DDSER-EEGYIIGDVAGKKAILIDDILNTGKT--FAEAAKIVEREG 245 (323)
T ss_pred eEEEEECCChHHHHHHHHHHhC-CCEEEEEEec-CCCcc-eeeccccccCCCEEEEEcceeCcHHH--HHHHHHHHHhCC
Confidence 3444444667899999999996 8776445333 22221 11234568999999999998765433 345788999999
Q ss_pred ccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHHHH
Q 020390 96 VASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQR 175 (327)
Q Consensus 96 a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la~~ 175 (327)
|++|.++.-+.=++. ....++.+ +|+|+|++-|-+....+-.....+. +.++++|+.
T Consensus 246 A~~V~~~~tHgif~~-------------~a~~~l~~------s~i~~iv~TdTi~~~~~~~~k~~~i----sva~lla~~ 302 (323)
T PRK02458 246 ATEIYAVASHGLFAG-------------GAAEVLEN------APIKEILVTDSVATKERVPKNVTYL----SASELIADA 302 (323)
T ss_pred CCcEEEEEEChhcCc-------------hHHHHHhh------CCCCEEEEECCcCCchhcCCCcEEE----EhHHHHHHH
Confidence 999999876653322 12223333 4789999999764321101011121 468899999
Q ss_pred HhcC
Q 020390 176 LHQL 179 (327)
Q Consensus 176 l~~~ 179 (327)
|.+.
T Consensus 303 i~~~ 306 (323)
T PRK02458 303 IIRI 306 (323)
T ss_pred HHHH
Confidence 8765
No 87
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=95.59 E-value=0.62 Score=45.11 Aligned_cols=133 Identities=10% Similarity=0.049 Sum_probs=85.1
Q ss_pred cEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccC-hhh---HHHHHHHHHHcCC
Q 020390 185 IVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQS-GGT---LIECQKVLAAHGA 258 (327)
Q Consensus 185 ~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~T-G~T---l~~~~~~L~~~GA 258 (327)
..|+ +..+....+..++. +.++.-+...|..+++....+..++.|++|+||-.+... ... +..++..|+++||
T Consensus 22 ~~i~-~g~~~~~la~~ia~~lg~~l~~~~~~~FpDGE~~v~i~~~vrg~~V~ivqs~~~p~nd~l~eLll~~~alr~~ga 100 (330)
T PRK02812 22 LRLF-SGSSNPALAQEVARYLGMDLGPMIRKRFADGELYVQIQESIRGCDVYLIQPTCAPVNDHLMELLIMVDACRRASA 100 (330)
T ss_pred EEEE-ECCCCHHHHHHHHHHhCCCceeeEEEECCCCCEEEEeCCCCCCCEEEEECCCCCCccHHHHHHHHHHHHHHHhCC
Confidence 3444 34556667777765 444444555565665544345678999999999997644 333 4457889999999
Q ss_pred CeEEEEEEee-------cCCC------ChHHH-HhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHh
Q 020390 259 AKVSAYVTHG-------VFPK------GSWER-FTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADA 324 (327)
Q Consensus 259 ~~v~~~~tH~-------~~~~------~a~~~-l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~ 324 (327)
++|.++.-+- .+.+ ....+ |+..| +++|++-|-+-...+.... -++..++-++.+++.
T Consensus 101 ~ri~~ViPYl~YaRQDr~~~~~e~isak~vA~lL~~~g-------~d~vitvDlH~~~~~~fF~-ipv~nl~~~~~l~~~ 172 (330)
T PRK02812 101 RQITAVIPYYGYARADRKTAGRESITAKLVANLITKAG-------ADRVLAMDLHSAQIQGYFD-IPCDHVYGSPVLLDY 172 (330)
T ss_pred ceEEEEEecccccccccccCCCCCchHHHHHHHHHhcC-------CCEEEEEECCchHHcCccC-CCceeeeChHHHHHH
Confidence 9999886431 1222 22333 44446 7999999987543332222 256788999999988
Q ss_pred hc
Q 020390 325 LQ 326 (327)
Q Consensus 325 i~ 326 (327)
|+
T Consensus 173 i~ 174 (330)
T PRK02812 173 LA 174 (330)
T ss_pred HH
Confidence 73
No 88
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=95.29 E-value=0.85 Score=43.60 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=88.4
Q ss_pred CCEEEEe-cCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhh
Q 020390 15 KQVHLFY-CVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPR 93 (327)
Q Consensus 15 ~~~~i~~-g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~ 93 (327)
.++.+.+ -.+...+|+.+++.+++.++.-+...+..++... ...+..++.|++|+|+-.+.+-..- +...+++|++
T Consensus 151 ~~~vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~~~-~~~~~~~v~g~~viivDDii~TG~T--l~~a~~~l~~ 227 (302)
T PLN02369 151 PDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAE-VMNLIGDVKGKVAIMVDDMIDTAGT--ITKGAALLHQ 227 (302)
T ss_pred CceEEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcceee-eEecCCCCCCCEEEEEcCcccchHH--HHHHHHHHHh
Confidence 3444443 4567789999999994378877777665554322 2345678999999999988665333 3456689999
Q ss_pred cCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHH
Q 020390 94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK 173 (327)
Q Consensus 94 ~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la 173 (327)
.|++++.++..+.=.+. ..+-++.+ ++++.+++.|-+.......|+ .+..+ +..++||
T Consensus 228 ~Ga~~v~~~~tH~v~~~-------------~a~~~l~~------~~~~~iv~t~ti~~~~~~~~~-~~~~~--~v~~~la 285 (302)
T PLN02369 228 EGAREVYACATHAVFSP-------------PAIERLSS------GLFQEVIVTNTIPVSEKNYFP-QLTVL--SVANLLG 285 (302)
T ss_pred CCCCEEEEEEEeeeeCH-------------HHHHHHHh------CCCCEEEEeCCCCChhhcccC-CceEE--EHHHHHH
Confidence 99999998883221111 11222323 368999999976431111122 22222 4688999
Q ss_pred HHHhcCC
Q 020390 174 QRLHQLP 180 (327)
Q Consensus 174 ~~l~~~~ 180 (327)
+.|.+.+
T Consensus 286 ~~i~~~~ 292 (302)
T PLN02369 286 ETIWRVH 292 (302)
T ss_pred HHHHHHh
Confidence 9987653
No 89
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=95.24 E-value=0.8 Score=43.90 Aligned_cols=139 Identities=19% Similarity=0.121 Sum_probs=88.2
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhcC
Q 020390 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLF 95 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~~ 95 (327)
.+.+=.......+|..+|+.|| +++.-++-.+..+++.. ...+..++.|++|+|+-.+.+-..-| ...++.|++.|
T Consensus 160 ~vvv~pd~Gg~~~A~~la~~Lg-~~~~~~~k~r~~~~~~~-~~~~~~~~~g~~vliVDDii~TG~T~--~~a~~~l~~~G 235 (309)
T PRK01259 160 LVVVSPDVGGVVRARALAKRLD-ADLAIIDKRRPRANVSE-VMNIIGDVEGRDCILVDDMIDTAGTL--CKAAEALKERG 235 (309)
T ss_pred cEEEEECCCcHHHHHHHHHHhC-CCEEEEEeecccceeEE-EEeecccCCCCEEEEEecccCcHHHH--HHHHHHHHccC
Confidence 3444444667899999999996 88877776666665422 23445689999999999987664442 35678999999
Q ss_pred ccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCccccccccCCcccccccccHHHHHHH
Q 020390 96 VASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQR 175 (327)
Q Consensus 96 a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~~gffn~~v~~l~~~~~~~la~~ 175 (327)
++++.++..+.=.+ ...+-++.+ +++|.+++.|-+...........+..+ +.++++|+.
T Consensus 236 a~~v~~~~tH~i~~-------------~~a~~~l~~------~~~~~iv~t~ti~~~~~~~~~~k~~~i--sva~~ia~~ 294 (309)
T PRK01259 236 AKSVYAYATHPVLS-------------GGAIERIEN------SVIDELVVTDSIPLSEEAKKCDKIRVL--SVAPLLAEA 294 (309)
T ss_pred CCEEEEEEEeeeCC-------------hHHHHHHhc------CCCCEEEEecCcccchhhccCCCeEEE--EcHHHHHHH
Confidence 99998877532111 111223322 378999999965321110000111111 468899999
Q ss_pred HhcC
Q 020390 176 LHQL 179 (327)
Q Consensus 176 l~~~ 179 (327)
|.+.
T Consensus 295 i~~~ 298 (309)
T PRK01259 295 IRRI 298 (309)
T ss_pred HHHH
Confidence 9765
No 90
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=95.18 E-value=0.4 Score=42.29 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=63.5
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCce--eeeeeEeecCC-----CceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHH
Q 020390 16 QVHLFYCVECEELARKVAAQSDLIT--LQSINWRNFAD-----GWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVI 88 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~--~~~~~~~~F~d-----GE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~ 88 (327)
.+.+=-.+.+-.+|..+++.|+ ++ +.-+..+.|-| |+..+.-.+..+++|++|+||-.+.+-..-|. .+.
T Consensus 36 ~vvvgI~~Gg~~fa~~L~~~L~-~~~~v~~l~~ssY~~~~~~~~~v~i~~~~~~~v~gk~VLlVDDIiDTG~TL~--~l~ 112 (178)
T PRK15423 36 MVLVGLLRGSFMFMADLCREVQ-VSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLS--KVR 112 (178)
T ss_pred eEEEEEecCChHHHHHHHHHhC-CCcceeEEEEEEecCCCcccCceEEecCCCCCCCCCEEEEEeeecCchHHHH--HHH
Confidence 4444444678899999999995 75 55788899964 44333333456899999999999876654444 555
Q ss_pred HHhhhcCccceeEe-ecCCCCCcc
Q 020390 89 YALPRLFVASFTLV-LPFFPTGSF 111 (327)
Q Consensus 89 ~al~~~~a~~i~~v-iPY~~YsRq 111 (327)
+.++..|++++..+ +=+-|-.|+
T Consensus 113 ~~l~~~~~~~v~~avL~~K~~~r~ 136 (178)
T PRK15423 113 EILSLREPKSLAICTLLDKPSRRE 136 (178)
T ss_pred HHHHhCCCCEEEEEEEEECCCCCc
Confidence 66788888888554 444444443
No 91
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=94.97 E-value=0.46 Score=47.63 Aligned_cols=135 Identities=11% Similarity=0.005 Sum_probs=85.2
Q ss_pred CCcEEEecCCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccC-hhh---HHHHHHHHHHc
Q 020390 183 NNIVIAFPDDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQS-GGT---LIECQKVLAAH 256 (327)
Q Consensus 183 ~~~viV~pd~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~T-G~T---l~~~~~~L~~~ 256 (327)
++.+|+ ...+....|..++. +.++.-+...|..++++...+..++.|++|+||-++... -.. +.-++++|+++
T Consensus 118 ~~m~I~-sgs~~~~LA~~IA~~Lg~~l~~~~~~rFpDGE~~Vri~e~VrG~dV~IVqS~~~pvNd~LmELLllidAlr~a 196 (439)
T PTZ00145 118 ENAILF-SGSSNPLLSKNIADHLGTILGRVHLKRFADGEVSMQFLESIRGKDVYIIQPTCPPVNENLIELLLMISTCRRA 196 (439)
T ss_pred CCeEEE-ECCCCHHHHHHHHHHhCCCceeeEEEECCCCCEEEEECCCcCCCeEEEEecCCCCCcHHHHHHHHHHHHHHHh
Confidence 334555 44456667777775 455555556666666544445678999999999987654 333 44577899999
Q ss_pred CCCeEEEEEEee-------cCCC------ChH-HHHhcccCCCccCCcCEEEEecCCCCchhhhcC-CCCeEEEechHHH
Q 020390 257 GAAKVSAYVTHG-------VFPK------GSW-ERFTLKNGENMENAFANFWITDSCPLTVKAIAN-KAPFEVLSLAGSI 321 (327)
Q Consensus 257 GA~~v~~~~tH~-------~~~~------~a~-~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~-~~k~~v~~va~~l 321 (327)
||++|.++.-+- .+.+ ... +.|+..| +++|++-|-+-...+.... .-++.-++.++.+
T Consensus 197 gAkrItlViPYl~YaRQDR~~~~gepIsak~vA~lL~~~G-------~d~VitvDlHs~~i~~fF~~~iPvdnl~a~~~~ 269 (439)
T PTZ00145 197 SAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEAMG-------VDRVVAIDLHSGQIQGFFGPRVPVDNLEAQLIG 269 (439)
T ss_pred ccCeEEEEeecccchheecccCCCCChhHHHHHHHHHHcC-------CCeEEEEecChHHHHhhcCCCcccccccccHHH
Confidence 999999886431 1221 122 3344446 7999999987543332221 1245666777888
Q ss_pred HHhh
Q 020390 322 ADAL 325 (327)
Q Consensus 322 a~~i 325 (327)
++.|
T Consensus 270 a~~i 273 (439)
T PTZ00145 270 LDYF 273 (439)
T ss_pred HHHH
Confidence 8766
No 92
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=94.75 E-value=0.85 Score=44.21 Aligned_cols=126 Identities=12% Similarity=0.038 Sum_probs=79.0
Q ss_pred CChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccC-hhh---HHHHHHHHHHcCCCeEEEEE
Q 020390 192 DGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQS-GGT---LIECQKVLAAHGAAKVSAYV 265 (327)
Q Consensus 192 ~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~T-G~T---l~~~~~~L~~~GA~~v~~~~ 265 (327)
.+....+..++. +.++.-+..+|..+++....+..++.|++|+||-++... ... +..++..|+++||++|.++.
T Consensus 16 ~~~~~La~~ia~~lg~~l~~~~~~~FpdGE~~v~i~~~vrg~dV~ivqs~~~p~nd~l~eLll~~~alr~~~a~~i~~Vi 95 (332)
T PRK00553 16 SKAKKLVDSICRKLSMKPGEIVIQKFADGETYIRFDESVRNKDVVIFQSTCSPVNDSLMELLIAIDALKRGSAKSITAIL 95 (332)
T ss_pred CCCHHHHHHHHHHhCCceeeeEEEECCCCCEEEEECCCCCCCEEEEEcCCCCCCchHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 344555666654 444444555666666544445678999999999987643 333 44577899999999998886
Q ss_pred Eee-------cCCC------ChH-HHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhh
Q 020390 266 THG-------VFPK------GSW-ERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADAL 325 (327)
Q Consensus 266 tH~-------~~~~------~a~-~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i 325 (327)
-+- .+.+ ... +.|+..| +++|++-|-+-...+..... ++.-++-.+++++.+
T Consensus 96 PYl~YaRQDr~~~~~e~isak~vA~ll~~~g-------~d~vit~DlH~~~i~~~F~i-pv~~l~a~~~~~~~~ 161 (332)
T PRK00553 96 PYYGYARQDRKTAGREPITSKLVADLLTKAG-------VTRVTLTDIHSDQTQGFFDI-PVDILRTYHVFLSRV 161 (332)
T ss_pred eccccchhhcccCCCCCccHHHHHHHHHhcC-------CCEEEEEeCChHHHHhhcCC-CcceeechHHHHHHH
Confidence 331 1211 222 3344446 79999999875433322222 455677788888766
No 93
>PF15609 PRTase_2: Phosphoribosyl transferase
Probab=94.73 E-value=0.052 Score=48.28 Aligned_cols=38 Identities=24% Similarity=0.325 Sum_probs=31.7
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVT 266 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~t 266 (327)
..+.+++|||=+|||.|+.++++.|++.-+.+=+++++
T Consensus 120 ~~~~lVLVDDEiSTG~T~lnli~al~~~~p~~~yvvas 157 (191)
T PF15609_consen 120 NARTLVLVDDEISTGNTFLNLIRALHAKYPRKRYVVAS 157 (191)
T ss_pred CCCCEEEEecCccchHHHHHHHHHHHHhCCCceEEEEE
Confidence 36799999999999999999999999887765444443
No 94
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=94.71 E-value=0.59 Score=45.03 Aligned_cols=127 Identities=13% Similarity=0.058 Sum_probs=78.2
Q ss_pred CCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccC-hh---hHHHHHHHHHHcCCCeEEEE
Q 020390 191 DDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQS-GG---TLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 191 d~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~T-G~---Tl~~~~~~L~~~GA~~v~~~ 264 (327)
..+.-..+..++. +.++.-+...|..+++....+..++.|++|+||-.+... -. -+.-+++.||++||++|.++
T Consensus 11 ~~~~~~la~~ia~~lg~~l~~~~~~~FpdGE~~v~i~~~vrg~dV~iv~s~~~~~nd~lmelll~~~alr~~~a~~i~~V 90 (320)
T PRK02269 11 LSSNKELAEKVAQEIGIELGKSSVRQFSDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILIMVDALKRASAESINVV 90 (320)
T ss_pred CCCCHHHHHHHHHHhCCceeeeEEEECCCCCEEEEECCCCCCCEEEEEecCCCCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 3344556666654 334444445555555543345678999999999886543 22 35567899999999999887
Q ss_pred EEee-------cCCC------ChHH-HHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhh
Q 020390 265 VTHG-------VFPK------GSWE-RFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADAL 325 (327)
Q Consensus 265 ~tH~-------~~~~------~a~~-~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i 325 (327)
.-+- .+.+ .... .|+..| +++|++-|-+-...+..... ++.-++.+|++++.+
T Consensus 91 ~PYl~YaRQDr~~~~~e~isak~~a~ll~~~g-------~d~vit~D~H~~~~~~~f~~-p~~~l~~~p~l~~~i 157 (320)
T PRK02269 91 MPYYGYARQDRKARSREPITSKLVANMLEVAG-------VDRLLTVDLHAAQIQGFFDI-PVDHLMGAPLIADYF 157 (320)
T ss_pred EeccccchhhcccCCCCCchHHHHHHHHhhcC-------CCEEEEECCChHHHhccccC-CchhhhhHHHHHHHH
Confidence 6431 1222 2233 334446 79999999875332222222 355678888888876
No 95
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=94.37 E-value=0.72 Score=44.22 Aligned_cols=109 Identities=16% Similarity=0.112 Sum_probs=71.1
Q ss_pred EeeeeeCCccEEEeecCCCCCCeEEEEeccccChh-hH---HHHHHHHHHcCCCeEEEEEEee-------cCCC------
Q 020390 210 CAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGG-TL---IECQKVLAAHGAAKVSAYVTHG-------VFPK------ 272 (327)
Q Consensus 210 ~~K~R~~~~~~~~~~~~~v~gk~viivDDii~TG~-Tl---~~~~~~L~~~GA~~v~~~~tH~-------~~~~------ 272 (327)
+.-.|..++++......++.|++|+|+........ .+ .-.+++||++||++|.++.-.- .|.+
T Consensus 31 ~~~~rF~DGE~~V~i~EsVrg~dVfI~qs~~~pvnd~lmELLi~idA~k~asA~~It~ViPY~gYARQDk~~~~repIsa 110 (314)
T COG0462 31 VEVKRFPDGEIYVRIEESVRGKDVFIIQSTSPPVNDNLMELLIMIDALKRASAKRITAVIPYFGYARQDKAFKPREPISA 110 (314)
T ss_pred ceeEEcCCCcEEEEecccccCCeEEEEeCCCCCcCHHHHHHHHHHHHHHhcCCceEEEEeecchhhccCcccCCCCCEeH
Confidence 34455566554444678899999999998888544 33 4467999999999999986321 1111
Q ss_pred Ch-HHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHHHHHhhc
Q 020390 273 GS-WERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 326 (327)
Q Consensus 273 ~a-~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~la~~i~ 326 (327)
.. .+.|..+| +++|++.|-+....+..... ++.-+.-+|++++.++
T Consensus 111 klvA~lL~~aG-------~drv~TvDlH~~qiqgfFdi-pvdnl~a~p~l~~~~~ 157 (314)
T COG0462 111 KLVANLLETAG-------ADRVLTVDLHAPQIQGFFDI-PVDNLYAAPLLAEYIR 157 (314)
T ss_pred HHHHHHHHHcC-------CCeEEEEcCCchhhcccCCC-ccccccchHHHHHHHH
Confidence 11 34455567 79999999885443322222 4555667788887664
No 96
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=93.98 E-value=0.87 Score=40.08 Aligned_cols=88 Identities=8% Similarity=0.075 Sum_probs=60.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCcee--eeeeEeecCCCce----eEEEeeCCCCCCceEEEEEecCCchhHHHHHHHH
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITL--QSINWRNFADGWP----NLYINSAHDIRGQHVAFLASFSSPGVIFEQISVI 88 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~--~~~~~~~F~dGE~----~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~ 88 (327)
..+.+=-.++...+|..+|+.|| +++ .-+...++.+++. ........+++|++|+||-...+-...++ ..+
T Consensus 41 ~~viV~i~~gg~~~A~~La~~l~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~gk~VLIVDDIidTG~Tl~--~~~ 117 (181)
T PRK09162 41 NPLVLCVMGGGLVFTGQLLPRLD-FPLEFDYLHATRYRNETTGGELVWKVKPRESLKGRTVLVVDDILDEGHTLA--AIR 117 (181)
T ss_pred CeEEEEECCCcHHHHHHHHHHcC-CCcccCEEEEEecCCCccCCceeEecCCCCCCCCCEEEEEccccCcHHHHH--HHH
Confidence 34555445678899999999996 764 3455666665432 22223345799999999988876655433 466
Q ss_pred HHhhhcCccceeEeecC
Q 020390 89 YALPRLFVASFTLVLPF 105 (327)
Q Consensus 89 ~al~~~~a~~i~~viPY 105 (327)
+.|++.|+++|.+..-+
T Consensus 118 ~~Lk~~Ga~~V~~avL~ 134 (181)
T PRK09162 118 DRCLEMGAAEVYSAVLV 134 (181)
T ss_pred HHHHhCCCCEEEEEEEE
Confidence 77889999999887544
No 97
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=93.53 E-value=1.3 Score=36.30 Aligned_cols=75 Identities=13% Similarity=0.128 Sum_probs=43.9
Q ss_pred CCChhHhHHhhhc--CCCeEEEeeeeeCCccEEEeecCCCCCCeEEEEeccccC-hh---hHHHHHHHHHHcCCCeEEEE
Q 020390 191 DDGAWKRFHKMLD--HFPTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQS-GG---TLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 191 d~G~~~ra~~~a~--~~~~~~~~K~R~~~~~~~~~~~~~v~gk~viivDDii~T-G~---Tl~~~~~~L~~~GA~~v~~~ 264 (327)
..+.-..+..++. +.++.-+.-.|..+++....+.+++.|++|+||-++... -. -+..+++++++.||++|.++
T Consensus 6 g~~~~~La~~ia~~L~~~~~~~~~~~F~dGE~~v~i~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~~a~~i~~V 85 (116)
T PF13793_consen 6 GSSSQDLAERIAEALGIPLGKVETKRFPDGETYVRIPESVRGKDVFIIQSTSPPVNDNLMELLLLIDALRRAGAKRITLV 85 (116)
T ss_dssp SSSGHHHHHHHHHHTTS-EE-EEEEE-TTS-EEEEESS--TTSEEEEE---SSSHHHHHHHHHHHHHHHHHTTBSEEEEE
T ss_pred CCCCHHHHHHHHHHhCCceeeeEEEEcCCCCEEEEecccccCCceEEEEecCCchhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 3344555555554 334433444455555443335778999999999999876 23 34557899999999999998
Q ss_pred E
Q 020390 265 V 265 (327)
Q Consensus 265 ~ 265 (327)
.
T Consensus 86 i 86 (116)
T PF13793_consen 86 I 86 (116)
T ss_dssp E
T ss_pred c
Confidence 7
No 98
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=93.25 E-value=1.9 Score=37.48 Aligned_cols=89 Identities=12% Similarity=0.133 Sum_probs=59.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCce--eeeeeEeecCCC-----ceeEEEeeCCCCCCceEEEEEecCCchhHHHHHH
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLIT--LQSINWRNFADG-----WPNLYINSAHDIRGQHVAFLASFSSPGVIFEQIS 86 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~--~~~~~~~~F~dG-----E~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll 86 (327)
+..+.+=...+.-.+|..+++.|+ .+ +..+.++.|-|+ +..+......++.|++|+|+-.+.+-..-| ..
T Consensus 26 ~~~vvv~i~~GG~~~a~~l~~~L~-~~~~v~~i~~~~Y~~~~~~~~~~~~~~~~~~~~~gk~vlivDDii~TG~Tl--~~ 102 (166)
T TIGR01203 26 KPLVLLCVLKGSFPFFADLIRYIA-VPVQVDFMAVSSYGNGMQSSGDVKILKDLDLSIKGKDVLIVEDIVDTGLTL--QY 102 (166)
T ss_pred CCeEEEEEccCCHHHHHHHHHhcC-CCceeeEEEEeeccCCCcccCceEEecCCCCCCCCCEEEEEeeeeCcHHHH--HH
Confidence 334444445677899999999996 54 556777767544 223333356689999999999887654332 23
Q ss_pred HHHHhhhcCccceeEeecC
Q 020390 87 VIYALPRLFVASFTLVLPF 105 (327)
Q Consensus 87 ~~~al~~~~a~~i~~viPY 105 (327)
.+++|+..|+++|.++.-+
T Consensus 103 ~~~~l~~~g~~~i~~~~l~ 121 (166)
T TIGR01203 103 LLDLLKARKPKSLKIVTLL 121 (166)
T ss_pred HHHHHHHCCCCEEEEEEEE
Confidence 5567778898888766544
No 99
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=91.73 E-value=3.3 Score=36.72 Aligned_cols=88 Identities=14% Similarity=0.140 Sum_probs=58.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCc---e--eeeeeEeecCCC-----ceeEEE-eeCCCCCCceEEEEEecCCchhHHH
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLI---T--LQSINWRNFADG-----WPNLYI-NSAHDIRGQHVAFLASFSSPGVIFE 83 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~---~--~~~~~~~~F~dG-----E~~v~v-~~~~~vrg~dV~iiqs~~~~~~l~e 83 (327)
..+.+=-....-.+|..+++.|+ . + +.-+..++|.+| +..+.. .+..+++|++|+||-...+-..-|
T Consensus 36 ~~vivgi~~Gg~~fa~~L~~~L~-~~~~~~~i~fi~~~sy~~~~~~~g~~~i~~~~~~~~v~gk~VliVDDIidTG~Tl- 113 (189)
T PLN02238 36 SPVVLGVATGAFMFLADLVRAIQ-PLPRGLTVDFIRASSYGGGTESSGVAKVSGADLKIDVKGKHVLLVEDIVDTGNTL- 113 (189)
T ss_pred CcEEEEEccCCHHHHHHHHHHhC-ccCCCeEEEEEEeeecCCCccccCceeEecCCCCCCCCCCEEEEEecccchHHHH-
Confidence 34444344667789999999996 6 3 345677777653 333322 334679999999999887654332
Q ss_pred HHHHHHHhhhcCccceeEeecC
Q 020390 84 QISVIYALPRLFVASFTLVLPF 105 (327)
Q Consensus 84 lll~~~al~~~~a~~i~~viPY 105 (327)
..+++++++.|++++.++.-+
T Consensus 114 -~~~~~~l~~~g~~~v~~avL~ 134 (189)
T PLN02238 114 -SALVAHLEAKGAASVSVCALL 134 (189)
T ss_pred -HHHHHHHHhCCCCEEEEEEEE
Confidence 245578888999998776543
No 100
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=91.63 E-value=4.4 Score=39.21 Aligned_cols=130 Identities=13% Similarity=0.002 Sum_probs=78.4
Q ss_pred EecCCChhHhHHhhhc---CCCeEEEeeeeeCCcc--EEEeecCCCCCCeEEEEeccccChhhHH---HHHHHHHHcCCC
Q 020390 188 AFPDDGAWKRFHKMLD---HFPTVVCAKVREGDKR--IVRIKEGNPAGCHVVIVDDLVQSGGTLI---ECQKVLAAHGAA 259 (327)
Q Consensus 188 V~pd~G~~~ra~~~a~---~~~~~~~~K~R~~~~~--~~~~~~~~v~gk~viivDDii~TG~Tl~---~~~~~L~~~GA~ 259 (327)
+-...++-..+..++. +.++.-+..+|..+++ +......++.|++|+||-.+.+. ..+. .++..|+++||+
T Consensus 19 i~~g~~~~~LA~~ia~~l~g~~l~~~~~~~FpDGE~~v~v~~~~~vrg~~V~ivqs~~~p-d~lmELLl~~dAlr~~ga~ 97 (326)
T PLN02297 19 LFYCEETEELARKIAAESDAIELGSINWRKFPDGFPNLFINNAHGIRGQHVAFLASFSSP-AVIFEQLSVIYALPKLFVA 97 (326)
T ss_pred EEECCCCHHHHHHHHHHhCCCceeeeEEEECCCCCEEEEEcCCCCcCCCeEEEECCCCCC-hHHHHHHHHHHHHHHcCCC
Confidence 3344456666776664 3455555556655553 22223578999999999886655 4333 467899999999
Q ss_pred eEEEEEEee-------cCCCC------hHHHH-hc-----ccCCCccCCcCEEEEecCCCCchhhhcCCCCeE--EEech
Q 020390 260 KVSAYVTHG-------VFPKG------SWERF-TL-----KNGENMENAFANFWITDSCPLTVKAIANKAPFE--VLSLA 318 (327)
Q Consensus 260 ~v~~~~tH~-------~~~~~------a~~~l-~~-----~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~--v~~va 318 (327)
+|.++.-.- .|.++ ...++ +. +| +++|++-|-+......... .++. .++.+
T Consensus 98 ~i~~ViPY~~YaRQDr~~~~ge~isak~vA~ll~~~~~~~~g-------~d~vitvDlH~~~~~~fF~-~~~~~l~l~a~ 169 (326)
T PLN02297 98 SFTLVLPFFPTGTSERVEREGDVATAFTLARILSNIPISRGG-------PTSLVIFDIHALQERFYFG-DNVLPCFESGI 169 (326)
T ss_pred EEEEEeeCChhhcCCCCCCCCCCchHHHHHHHHhcccccccC-------CCEEEEEeCCChHHCCccC-CcccchhhccH
Confidence 999887431 22221 23333 33 35 7999999987543222111 2232 23778
Q ss_pred HHHHHhhc
Q 020390 319 GSIADALQ 326 (327)
Q Consensus 319 ~~la~~i~ 326 (327)
|.|++.|+
T Consensus 170 ~~l~~~i~ 177 (326)
T PLN02297 170 PLLKKRLQ 177 (326)
T ss_pred HHHHHHHH
Confidence 89998873
No 101
>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only]
Probab=91.55 E-value=0.64 Score=41.65 Aligned_cols=73 Identities=14% Similarity=0.227 Sum_probs=51.7
Q ss_pred ecCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCe--EEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCC
Q 020390 224 KEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAK--VSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 301 (327)
Q Consensus 224 ~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~--v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~ 301 (327)
...|+..|+|++.=.+++||.|+.+|.+.|+++|... |+.+.. +.++-+.+.+-+.. | -=.|++|+-.|.
T Consensus 183 fppDI~sR~VLLmYPi~stGnTV~~Av~VL~EhgVp~s~IiL~sL--F~tP~gak~i~~~f----P--~itiltseihpv 254 (267)
T KOG1017|consen 183 FPPDITSRRVLLMYPIISTGNTVCKAVEVLKEHGVPDSNIILVSL--FITPTGAKNITRKF----P--YITILTSEIHPV 254 (267)
T ss_pred cCCcccceeEEEEeeeecCCccHHHHHHHHHHcCCCcccEEEEEe--eecchhhHHHHHhC----C--eEEEEeecceec
Confidence 3678899999999999999999999999999999875 333331 23444555555542 1 235667777666
Q ss_pred chh
Q 020390 302 TVK 304 (327)
Q Consensus 302 ~~~ 304 (327)
.++
T Consensus 255 aPn 257 (267)
T KOG1017|consen 255 APN 257 (267)
T ss_pred Ccc
Confidence 443
No 102
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=90.54 E-value=2.2 Score=42.15 Aligned_cols=141 Identities=11% Similarity=-0.001 Sum_probs=86.8
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCcee-----EEEee-CCCCCCceEEEEEecCCchhHHHHHHHHH
Q 020390 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPN-----LYINS-AHDIRGQHVAFLASFSSPGVIFEQISVIY 89 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~-----v~v~~-~~~vrg~dV~iiqs~~~~~~l~elll~~~ 89 (327)
.+.+-.-.+.-..|+.+|..|| .++.-+.-.+..+++.+ +...+ +.+|.|++|+|+-.+.+-..- +.-.++
T Consensus 209 ~VVVsPD~Gg~~rA~~~A~~Lg-~~~ai~~K~R~~~~~~~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~T--l~~aa~ 285 (382)
T PRK06827 209 LMVISPDTGAMDRAKYYASVLG-VDLGLFYKRRDYSRVVNGRNPIVAHEFLGRDVEGKDVLIVDDMIASGGS--MIDAAK 285 (382)
T ss_pred cEEEEECccchHHHHHHHHHhC-CCEEEEEcccCCcccccCCCceEEEecCCcccCCCEEEEEeCCcCcHHH--HHHHHH
Confidence 3444444556789999999996 88876665554333211 22233 338999999999998765432 345788
Q ss_pred HhhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCC--ccccccccCCcccccccc
Q 020390 90 ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIH--ALQERFYFSDHVLPLFET 167 (327)
Q Consensus 90 al~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlH--s~~~~gffn~~v~~l~~~ 167 (327)
.|++.||++|.++....-++ + .+-++.+..+ ..++++|++-|-+ ....... ..+.. .+
T Consensus 286 ~Lk~~GA~~V~~~~tH~vf~--~------------a~~~l~~~~~--~g~i~~iv~TdTi~~~~~~~~~--~~~~~--is 345 (382)
T PRK06827 286 ELKSRGAKKIIVAATFGFFT--N------------GLEKFDKAYE--EGYFDRIIGTNLVYHPEELLSK--PWYIE--VD 345 (382)
T ss_pred HHHHcCCCEEEEEEEeecCh--H------------HHHHHHhhcc--cCCCCEEEEeCCCcCchhhccc--CCeEE--EE
Confidence 99999999998887765444 1 1223333211 1248999999954 3221110 01111 14
Q ss_pred cHHHHHHHHhcC
Q 020390 168 GIPLLKQRLHQL 179 (327)
Q Consensus 168 ~~~~la~~l~~~ 179 (327)
.+++||+.|.+.
T Consensus 346 va~llA~~I~~~ 357 (382)
T PRK06827 346 MSKLIARIIDAL 357 (382)
T ss_pred cHHHHHHHHHHH
Confidence 688999999775
No 103
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=87.58 E-value=10 Score=34.31 Aligned_cols=87 Identities=11% Similarity=0.133 Sum_probs=57.6
Q ss_pred cCCcHHHHHHHHHHcC--Cc--eeeeeeEeecCCC-----ceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhh
Q 020390 22 CVECEELARKVAAQSD--LI--TLQSINWRNFADG-----WPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP 92 (327)
Q Consensus 22 g~~~~~la~~ia~~l~--~~--~~~~~~~~~F~dG-----E~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~ 92 (327)
.+..-.+|..+++.|+ ++ ++..+.+..|-|| +..+...+..+++|++|+||-.+-+-..-| ..+++.|+
T Consensus 65 lkGg~~fa~dL~r~L~~~~~~~~vdfi~vssY~~~~~s~g~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL--~~v~~~l~ 142 (211)
T PTZ00271 65 LKGSFIFTADLARFLADEGVPVKVEFICASSYGTGVETSGQVRMLLDVRDSVENRHILIVEDIVDSAITL--QYLMRFML 142 (211)
T ss_pred cCCCHHHHHHHHHHhcccCCCeeEEEEEEEecCCCCcccCceEEecCCCCCCCCCEEEEEecccCCHHHH--HHHHHHHH
Confidence 4677889999999984 12 4677888888764 333333456789999999999887654332 24556666
Q ss_pred hcCccceeE-eecCCCCCc
Q 020390 93 RLFVASFTL-VLPFFPTGS 110 (327)
Q Consensus 93 ~~~a~~i~~-viPY~~YsR 110 (327)
+.+++++.. ++=+-|-.|
T Consensus 143 ~~~p~svk~avL~dK~~~r 161 (211)
T PTZ00271 143 AKKPASLKTVVLLDKPSGR 161 (211)
T ss_pred hcCCCEEEEEEEEEcccCC
Confidence 678888844 443333333
No 104
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=87.47 E-value=7.5 Score=34.96 Aligned_cols=87 Identities=11% Similarity=0.054 Sum_probs=61.0
Q ss_pred CEEEEe-cCCcHHHHHHHHHHcCCceeeeeeEeecCC--CceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhh
Q 020390 16 QVHLFY-CVECEELARKVAAQSDLITLQSINWRNFAD--GWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP 92 (327)
Q Consensus 16 ~~~i~~-g~~~~~la~~ia~~l~~~~~~~~~~~~F~d--GE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~ 92 (327)
++.+.+ ..+...++..+++.|+..+++.+...+... +....+.+++.++.|++|+|+-.+-.-..- +...++.|+
T Consensus 71 ~~vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~T--l~~ai~~L~ 148 (209)
T PRK00129 71 KLVIVPILRAGLGMVDGVLKLIPSARVGHIGLYRDEETLEPVEYYVKLPEDIDERTVIVVDPMLATGGS--AIAAIDLLK 148 (209)
T ss_pred eEEEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeCCCCCCCEEEEeeCCCcCCCCEEEEECCcccchHH--HHHHHHHHH
Confidence 344444 477889999999999756777777766432 122345567889999999999887654322 234667788
Q ss_pred hcCccceeEeec
Q 020390 93 RLFVASFTLVLP 104 (327)
Q Consensus 93 ~~~a~~i~~viP 104 (327)
+.|+++|.++.-
T Consensus 149 ~~G~~~I~~~~l 160 (209)
T PRK00129 149 KRGAKNIKVLCL 160 (209)
T ss_pred HcCCCEEEEEEE
Confidence 889999988765
No 105
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=85.63 E-value=6.4 Score=35.35 Aligned_cols=87 Identities=11% Similarity=0.018 Sum_probs=61.1
Q ss_pred CEEEEe-cCCcHHHHHHHHHHcCCceeeeeeEeecCC-Cc-eeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhh
Q 020390 16 QVHLFY-CVECEELARKVAAQSDLITLQSINWRNFAD-GW-PNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP 92 (327)
Q Consensus 16 ~~~i~~-g~~~~~la~~ia~~l~~~~~~~~~~~~F~d-GE-~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~ 92 (327)
++.+.+ ..+...++..+.+.++..+++.+...+... ++ ...+.++++++.|++|+++-++-.-..- +..+++.|+
T Consensus 69 ~i~~V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~T--l~~ai~~L~ 146 (207)
T TIGR01091 69 KIVLVPILRAGLGMVDGVLKLIPEAKVGHVGAYRNEETLKPVPYYSKLPEDIDERTVIVLDPMLATGGT--MIAALDLLK 146 (207)
T ss_pred cEEEEEEeCCcHHHHHHHHHhCCcCceeEEEEEeCCCCCCCEEEEecCCCCCCCCEEEEECCCccchHH--HHHHHHHHH
Confidence 354444 367789999999999756777766655422 22 2345567889999999999887654322 235677888
Q ss_pred hcCccceeEeec
Q 020390 93 RLFVASFTLVLP 104 (327)
Q Consensus 93 ~~~a~~i~~viP 104 (327)
+.|+++|.++..
T Consensus 147 ~~G~~~I~v~~l 158 (207)
T TIGR01091 147 KRGAKKIKVLSI 158 (207)
T ss_pred HcCCCEEEEEEE
Confidence 899999888776
No 106
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=84.83 E-value=16 Score=32.27 Aligned_cols=87 Identities=13% Similarity=0.136 Sum_probs=56.6
Q ss_pred CCEEEEe-cCCcHHHHHHHHHHcCCc--eeeeeeEeecCCC-----ceeEEEeeCCCCCCceEEEEEecCCchhHHHHHH
Q 020390 15 KQVHLFY-CVECEELARKVAAQSDLI--TLQSINWRNFADG-----WPNLYINSAHDIRGQHVAFLASFSSPGVIFEQIS 86 (327)
Q Consensus 15 ~~~~i~~-g~~~~~la~~ia~~l~~~--~~~~~~~~~F~dG-----E~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll 86 (327)
+++.+++ ...+-.++..+++++. + ++..+.++.|-+| +..+.-.+.++++|+||++|...-+....|. .
T Consensus 35 ~~~~vv~iLkGs~~F~~dL~r~i~-~~~e~dFm~vSSYg~~t~ssg~v~i~kDld~di~grdVLiVeDIiDsG~TLs--~ 111 (178)
T COG0634 35 KDPLVVGVLKGSFPFMADLIRAID-FPLEVDFMHVSSYGGGTSSSGEVKILKDLDEDIKGRDVLIVEDIIDSGLTLS--K 111 (178)
T ss_pred CceEEEEEcccchhhHHHHHHhcC-CCceeEEEEEeccCCCcccCCceEEecccccCCCCCeEEEEecccccChhHH--H
Confidence 3444433 3667788888888884 5 4467888888665 4333334678999999999987755433222 3
Q ss_pred HHHHhhhcCccceeEeec
Q 020390 87 VIYALPRLFVASFTLVLP 104 (327)
Q Consensus 87 ~~~al~~~~a~~i~~viP 104 (327)
+.+-|+..||+++..+.-
T Consensus 112 i~~~l~~r~a~sv~i~tL 129 (178)
T COG0634 112 VRDLLKERGAKSVRIATL 129 (178)
T ss_pred HHHHHHhCCCCeEEEEEE
Confidence 445566678888876543
No 107
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=84.18 E-value=14 Score=34.15 Aligned_cols=90 Identities=8% Similarity=0.097 Sum_probs=56.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCC----------cee---eeeeEeecCC----CceeEEEeeCCCCCCceEEEEEecC
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDL----------ITL---QSINWRNFAD----GWPNLYINSAHDIRGQHVAFLASFS 76 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~----------~~~---~~~~~~~F~d----GE~~v~v~~~~~vrg~dV~iiqs~~ 76 (327)
+..+.|=-.+..-.++..+.+.|.. .+. ..+.++.|-| ||..+.-....++.|++|+||-.+.
T Consensus 81 ~~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~vsSY~~~~s~g~v~i~~~~~~~l~gk~VLIVDDIi 160 (241)
T PTZ00149 81 EELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRVKSYCNDESTGKLEIVSDDLSCLKDKHVLIVEDII 160 (241)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEEEEccCCCcCCceEEecccccccCCCEEEEEEeEe
Confidence 3334443346677788888888841 123 6677777755 4433332344578999999999887
Q ss_pred CchhHHHHHHHHHHhhhcCccceeEeecC
Q 020390 77 SPGVIFEQISVIYALPRLFVASFTLVLPF 105 (327)
Q Consensus 77 ~~~~l~elll~~~al~~~~a~~i~~viPY 105 (327)
+-...|. .+++.|++.|++++.++.-+
T Consensus 161 dTG~Tl~--~~~~~L~~~g~~~V~va~L~ 187 (241)
T PTZ00149 161 DTGNTLV--KFCEYLKKFEPKTIRIATLF 187 (241)
T ss_pred ChHHHHH--HHHHHHHhcCCCEEEEEEEE
Confidence 6544332 34467888899988665533
No 108
>PF15610 PRTase_3: PRTase ComF-like
Probab=82.88 E-value=1.9 Score=40.49 Aligned_cols=40 Identities=23% Similarity=0.354 Sum_probs=35.3
Q ss_pred CCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEE
Q 020390 226 GNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 265 (327)
Q Consensus 226 ~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~ 265 (327)
.-++||.||.+|||--||++=..+.+.+++.|++....+.
T Consensus 134 ~~l~gk~lIflDDIkITGshE~~V~~~~~~~~~~~~~~yl 173 (274)
T PF15610_consen 134 EFLSGKHLIFLDDIKITGSHEDKVRKILKEYGLENDFIYL 173 (274)
T ss_pred HHhCCcEEEEeccEEecCcHHHHHHHHHHHcCccccEEEE
Confidence 3479999999999999999999999999999999855444
No 109
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=82.37 E-value=7.7 Score=33.54 Aligned_cols=77 Identities=12% Similarity=-0.005 Sum_probs=48.6
Q ss_pred CCcHHHHHHHHHHcCCceeeeeeEeec------------CCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHH
Q 020390 23 VECEELARKVAAQSDLITLQSINWRNF------------ADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYA 90 (327)
Q Consensus 23 ~~~~~la~~ia~~l~~~~~~~~~~~~F------------~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~a 90 (327)
...-.+|..+|+.|| +++..+.-..+ .+|+..+.+......+|++|+||-.+.+...-| .-+++.
T Consensus 55 ~~G~~~A~~la~~L~-~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDIitTG~Tl--~~a~~~ 131 (169)
T TIGR01090 55 ARGFIFGAALAYKLG-VGFVPVRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGGTA--EATDEL 131 (169)
T ss_pred hccHHHHHHHHHHHC-CCEEEEEeCCCCCCceeeeEEeeccCceEEEEehhhcCCcCEEEEEeccccchHHH--HHHHHH
Confidence 445589999999995 87654432222 233323444323346899999998877654332 246678
Q ss_pred hhhcCccceeEe
Q 020390 91 LPRLFVASFTLV 102 (327)
Q Consensus 91 l~~~~a~~i~~v 102 (327)
++++|++.+.++
T Consensus 132 L~~~Ga~~v~~~ 143 (169)
T TIGR01090 132 IRKLGGEVVEAA 143 (169)
T ss_pred HHHcCCEEEEEE
Confidence 888998766543
No 110
>PLN02440 amidophosphoribosyltransferase
Probab=78.53 E-value=24 Score=35.96 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=72.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCceeee-eeEeecC------------CCceeEEEee-CCCCCCceEEEEEecCCch
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLITLQS-INWRNFA------------DGWPNLYINS-AHDIRGQHVAFLASFSSPG 79 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~~~~-~~~~~F~------------dGE~~v~v~~-~~~vrg~dV~iiqs~~~~~ 79 (327)
+.++.+---.+...+|..+++.+| +++.. +.-.++. ++....+... ...++|++|+||-..-.-.
T Consensus 275 ~~d~vvpVP~s~~~~A~~la~~lg-iP~~~~lvr~ry~~rt~i~~~q~~r~~~~~~k~~~~~~~v~gk~VlLVDDiittG 353 (479)
T PLN02440 275 DCDVVIPVPDSGRVAALGYAAKLG-VPFQQGLIRSHYVGRTFIEPSQKIRDFSVKLKLNPVRSVLEGKRVVVVDDSIVRG 353 (479)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHhC-CCchhheEEEeeccccccCcchhhhhhhheeeeecccccccCceEEEEeceeCcH
Confidence 345555444556789999999996 87752 1113332 1222233322 2568999999998765544
Q ss_pred hHHHHHHHHHHhhhcCccceeEeecCCC--------CCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCC
Q 020390 80 VIFEQISVIYALPRLFVASFTLVLPFFP--------TGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIH 149 (327)
Q Consensus 80 ~l~elll~~~al~~~~a~~i~~viPY~~--------YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlH 149 (327)
.-+. -+++.|+++||++|.+++---| ..=.+|.+.-+.-.+...+++.| |+|.+..+.+.
T Consensus 354 tTl~--~i~~~L~~aGa~~V~v~v~~p~~~~p~~~G~d~p~~~~li~~~~~~~ei~~~~--------~~dsl~~l~~~ 421 (479)
T PLN02440 354 TTSS--KIVRMLREAGAKEVHMRIASPPIIASCYYGVDTPSREELISNRMSVEEIRKFI--------GCDSLAFLPLE 421 (479)
T ss_pred HHHH--HHHHHHHhcCCCEEEEEEECCcccccceeeccCCCHHHHhhcCCCHHHHHHHh--------CCCEEEEecHH
Confidence 4333 3678899999999877654322 22233333223334555666665 46777666544
No 111
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=78.31 E-value=24 Score=30.72 Aligned_cols=88 Identities=16% Similarity=0.132 Sum_probs=54.4
Q ss_pred CEEEEecCCcHHHHHHHHHHcC---Cc--eeeeeeEeecCCCc-----e-eEE-EeeCCCCCCceEEEEEecCCchhHHH
Q 020390 16 QVHLFYCVECEELARKVAAQSD---LI--TLQSINWRNFADGW-----P-NLY-INSAHDIRGQHVAFLASFSSPGVIFE 83 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~---~~--~~~~~~~~~F~dGE-----~-~v~-v~~~~~vrg~dV~iiqs~~~~~~l~e 83 (327)
.+.+--....-.+|..+++.|+ ++ ++..+....|-|+. . .++ ..+..++.|++|+||-.+.+-..-|
T Consensus 33 ~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~~~~~~~~~~~~~~l~~~v~gr~VLIVDDIidTG~Tl- 111 (176)
T PRK05205 33 LVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTKKGLHPQVKPTDIPFDIEGKRVILVDDVLYTGRTI- 111 (176)
T ss_pred eEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCccccCcccccccccCCCCCCCCEEEEEecccCcHHHH-
Confidence 3444444667889999999994 13 24555666666542 1 111 2244579999999999887654432
Q ss_pred HHHHHHHhhhcC-ccceeEeecC
Q 020390 84 QISVIYALPRLF-VASFTLVLPF 105 (327)
Q Consensus 84 lll~~~al~~~~-a~~i~~viPY 105 (327)
..+++.|++.| ++++.++.-+
T Consensus 112 -~~~~~~L~~~G~~~~v~~avL~ 133 (176)
T PRK05205 112 -RAALDALFDYGRPARVQLAVLV 133 (176)
T ss_pred -HHHHHHHHhcCCCcEEEEEEEE
Confidence 24557788887 6777554443
No 112
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=77.86 E-value=34 Score=34.89 Aligned_cols=87 Identities=13% Similarity=0.016 Sum_probs=54.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCceeeeeeE-eecC----------CCceeEEEee---CCCCCCceEEEEEecCCch
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINW-RNFA----------DGWPNLYINS---AHDIRGQHVAFLASFSSPG 79 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~-~~F~----------dGE~~v~v~~---~~~vrg~dV~iiqs~~~~~ 79 (327)
+..+.+---.+...+|..+++.+| +++...-+ .+|- ..+..+++.. .+.+.|++|++|.....-.
T Consensus 295 ~~D~Vv~VP~sg~~~A~~la~~lg-ip~~~~lir~~y~grt~i~~~q~~r~~~v~~k~~~~~~~~~gk~vvlvDD~i~tG 373 (479)
T PRK09123 295 DADVVVPVPDSGVPAAIGYAQESG-IPFELGIIRNHYVGRTFIQPTQQIRNLGVKLKHNANRAVIEGKRVVLVDDSIVRG 373 (479)
T ss_pred CCeEEEEcCccHHHHHHHHHHhcC-CCeeheEEEEeecCccccccccccccccEEEEecccccccCCCEEEEEeceeCch
Confidence 344555333456679999999996 88753222 2332 0111233322 3347899999998765543
Q ss_pred hHHHHHHHHHHhhhcCccceeEee
Q 020390 80 VIFEQISVIYALPRLFVASFTLVL 103 (327)
Q Consensus 80 ~l~elll~~~al~~~~a~~i~~vi 103 (327)
.-+ .-+++.|+++||++|.+.+
T Consensus 374 ~Tl--~~~~~~l~~~Ga~~v~~~~ 395 (479)
T PRK09123 374 TTS--RKIVQMLRDAGAKEVHLRI 395 (479)
T ss_pred HHH--HHHHHHHHHcCCCEEEEEE
Confidence 332 2578899999999999887
No 113
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=77.24 E-value=19 Score=28.58 Aligned_cols=78 Identities=19% Similarity=0.177 Sum_probs=51.1
Q ss_pred CCcHHHHHHHHHHcCCceeeeeeEe----------ecCCCceeEEEeeCCCCCCceEEEEEecCCch-hHHHHHHHHHHh
Q 020390 23 VECEELARKVAAQSDLITLQSINWR----------NFADGWPNLYINSAHDIRGQHVAFLASFSSPG-VIFEQISVIYAL 91 (327)
Q Consensus 23 ~~~~~la~~ia~~l~~~~~~~~~~~----------~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~-~l~elll~~~al 91 (327)
.+.-.+|..+|..|+ .+....... ....+.........+.+.|++|+||-...+-. .+. -+++.+
T Consensus 36 ~~G~~~a~~la~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~vliVDDvi~tG~Tl~---~~~~~L 111 (125)
T PF00156_consen 36 RGGIPLAAALARALG-IPLVFVRKRKSYYPGSDKTSREKNNQELFIIDKEDIKGKRVLIVDDVIDTGGTLK---EAIELL 111 (125)
T ss_dssp TTTHHHHHHHHHHHT-HEEEEEEEEEEEESEEEEEEEETEEEEEEEEESSSGTTSEEEEEEEEESSSHHHH---HHHHHH
T ss_pred hccHHHHHHHHHHhC-CCccceeeeecccccchhhhhccCceEEeecccccccceeEEEEeeeEcccHHHH---HHHHHH
Confidence 456789999999995 766543321 11222212233456788999999999876543 333 456788
Q ss_pred hhcCccceeEeec
Q 020390 92 PRLFVASFTLVLP 104 (327)
Q Consensus 92 ~~~~a~~i~~viP 104 (327)
++.|++.+.++..
T Consensus 112 ~~~g~~~v~~~vl 124 (125)
T PF00156_consen 112 KEAGAKVVGVAVL 124 (125)
T ss_dssp HHTTBSEEEEEEE
T ss_pred HhCCCcEEEEEEE
Confidence 8999988876543
No 114
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=76.97 E-value=14 Score=32.01 Aligned_cols=68 Identities=21% Similarity=0.193 Sum_probs=48.6
Q ss_pred CCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHHHhhhcCcc
Q 020390 23 VECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVA 97 (327)
Q Consensus 23 ~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~al~~~~a~ 97 (327)
...-.+|..+|..|| .++.-+.-.+...|+....+ .+++|+.|+||-..-.- ..+ .-.++.++++|++
T Consensus 65 ~gGi~~A~~~a~~l~-~p~~~~rK~~k~~g~~~~~~---g~~~g~~VlIVDDvi~TG~T~---~~~~~~l~~~Ga~ 133 (170)
T PRK13811 65 VGGVPLAVAVSLAAG-KPYAIIRKEAKDHGKAGLII---GDVKGKRVLLVEDVTTSGGSA---LYGIEQLRAAGAV 133 (170)
T ss_pred cCcHHHHHHHHHHHC-CCEEEEecCCCCCCCcceEE---cccCCCEEEEEEecccccHHH---HHHHHHHHHCCCe
Confidence 345689999999995 88776666555667644433 46899999999887654 333 3466788888874
No 115
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=76.33 E-value=7 Score=39.91 Aligned_cols=124 Identities=13% Similarity=0.127 Sum_probs=71.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeE------eec--CCC---ceeEEEe---eCCCCCCceEEEEEecCCchh
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINW------RNF--ADG---WPNLYIN---SAHDIRGQHVAFLASFSSPGV 80 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~------~~F--~dG---E~~v~v~---~~~~vrg~dV~iiqs~~~~~~ 80 (327)
.++.+---++...+|..+|+.+| +++..--+ ++| |.. +.+++.. +...++|++|+||...-.-..
T Consensus 286 ~D~VvpVPnqa~~lA~~la~~lg-ip~~~~lvk~~~~~rt~~~~~q~~R~~~vr~~f~~~~~~~~gk~vllVDDvittG~ 364 (484)
T PRK07272 286 ADIVIGVPNSSLSAASGYAEESG-LPYEMGLVKNQYVARTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMVDDSIVRGT 364 (484)
T ss_pred CCEEEEecHHHHHHHHHHHHHHC-CCcccCeEEEccCCccccCCCHHHHHHHHhhCccccccccCCCEEEEEccccCchH
Confidence 35555333556689999999996 87643111 344 221 1112222 245688999999977544333
Q ss_pred HHHHHHHHHHhhhcCccceeEeec--------CCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCC
Q 020390 81 IFEQISVIYALPRLFVASFTLVLP--------FFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIH 149 (327)
Q Consensus 81 l~elll~~~al~~~~a~~i~~viP--------Y~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlH 149 (327)
-+. -++++|+++||+.|.+.+- |++..++.+.-.-..-.+...+++.+ |+|.+-.+.+.
T Consensus 365 T~~--~~~~~L~~~Ga~~v~~~~~~p~~~~~c~ygid~~~~~~lia~~~~~~ei~~~~--------~~dsl~~~~~~ 431 (484)
T PRK07272 365 TSR--RIVQLLKEAGAKEVHVAIASPELKYPCFYGIDIQTRRELISANHSVEEICDII--------GADSLTYLSVD 431 (484)
T ss_pred HHH--HHHHHHHhcCCcEEEEEEeCCccccChhhhccCcCHHHHHhcCCCHHHHHHHh--------CCCEEEEecHH
Confidence 322 4677899999999988877 44544444331111123444555554 45666655543
No 116
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=76.12 E-value=27 Score=30.21 Aligned_cols=74 Identities=16% Similarity=0.093 Sum_probs=47.3
Q ss_pred CCcHHHHHHHHHHcCCceeeeeeEee-cC-----------CCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHH
Q 020390 23 VECEELARKVAAQSDLITLQSINWRN-FA-----------DGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYA 90 (327)
Q Consensus 23 ~~~~~la~~ia~~l~~~~~~~~~~~~-F~-----------dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~a 90 (327)
++.-.+|..+|..|| +++.-+.-.+ ++ .|+..+++.-...++|++|+||-.+.+-..- +.-+++.
T Consensus 60 ~~Gi~~a~~la~~l~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~T--l~~~~~~ 136 (175)
T PRK02304 60 ARGFIFGAALAYKLG-IGFVPVRKPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGT--LEAAIKL 136 (175)
T ss_pred cchHHHHHHHHHHhC-CCEEEEEcCCCCCCceEeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHH--HHHHHHH
Confidence 456689999999995 8875432211 11 1333444432234889999999988765333 2346677
Q ss_pred hhhcCccce
Q 020390 91 LPRLFVASF 99 (327)
Q Consensus 91 l~~~~a~~i 99 (327)
++++|++.+
T Consensus 137 l~~~Ga~~v 145 (175)
T PRK02304 137 LERLGAEVV 145 (175)
T ss_pred HHHcCCEEE
Confidence 888998765
No 117
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=75.15 E-value=22 Score=31.77 Aligned_cols=84 Identities=15% Similarity=0.112 Sum_probs=53.0
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCcee-E--EEe-eCCCCCCceEEEEEecCCch-hHHHHHHHHHH
Q 020390 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPN-L--YIN-SAHDIRGQHVAFLASFSSPG-VIFEQISVIYA 90 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~-v--~v~-~~~~vrg~dV~iiqs~~~~~-~l~elll~~~a 90 (327)
++.+=...+.-.+|..+|..|+ .++..+.-.++..|+.. . .+. ...+++|++|+||....+-. .+.+ +++.
T Consensus 87 D~Ivgi~~gG~~~A~~lA~~L~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~gk~VlIVDDVitTG~Tl~~---ai~~ 162 (200)
T PRK02277 87 DVVVGIAKSGVPLATLVADELG-KDLAIYHPKKWDHGEGEKKTGSFSRNFASVEGKRCVIVDDVITSGTTMKE---TIEY 162 (200)
T ss_pred CEEEeeccCCHHHHHHHHHHhC-CCcEEEecccccccccccccceeccccccCCcCEEEEEeeccCchHHHHH---HHHH
Confidence 4444333567799999999996 88766655555333211 1 111 11357899999998876553 3433 5567
Q ss_pred hhhcCccceeEee
Q 020390 91 LPRLFVASFTLVL 103 (327)
Q Consensus 91 l~~~~a~~i~~vi 103 (327)
++++|++.+.++.
T Consensus 163 l~~~Ga~~v~v~v 175 (200)
T PRK02277 163 LKEHGGKPVAVVV 175 (200)
T ss_pred HHHcCCEEEEEEE
Confidence 8889988775544
No 118
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=69.10 E-value=44 Score=33.71 Aligned_cols=94 Identities=11% Similarity=0.021 Sum_probs=57.1
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeE-eecC-----CCc-------eeEEEe-eCCCCCCceEEEEEecCCchh
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINW-RNFA-----DGW-------PNLYIN-SAHDIRGQHVAFLASFSSPGV 80 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~-~~F~-----dGE-------~~v~v~-~~~~vrg~dV~iiqs~~~~~~ 80 (327)
.++.+-.-.+...+|..+|+.|| +++...-+ +++. +.+ ....+. +.+.+.|++|+||-..-.-..
T Consensus 276 ~d~Vv~vPd~g~~~A~~~A~~lg-ip~~~~l~rk~~~~r~~i~~~qr~rn~~~~~~~~~~~~~v~gK~VlLVDDvitTG~ 354 (445)
T PRK08525 276 ADFVVPVPDSGVPAAIGYAQESG-IPFEMAIVRNHYVGRTFIEPTQEMRNLKVKLKLNPMSKVLEGKRIVVIDDSIVRGT 354 (445)
T ss_pred CCeEEECCchHHHHHHHHHHHhC-CCccceEEEeeccccccCCHHHHHHhhheeEEecccccccCCCeEEEEecccCcHH
Confidence 34443333344688999999996 87632111 1111 111 112222 234589999999988755444
Q ss_pred HHHHHHHHHHhhhcCccceeEeecCCCCCcc
Q 020390 81 IFEQISVIYALPRLFVASFTLVLPFFPTGSF 111 (327)
Q Consensus 81 l~elll~~~al~~~~a~~i~~viPY~~YsRq 111 (327)
-|. -+++.||++||++|.+++..-+.+..
T Consensus 355 Tl~--~a~~~Lr~aGA~~V~v~~~hp~~~~~ 383 (445)
T PRK08525 355 TSK--KIVSLLRAAGAKEIHLRIACPEIKFP 383 (445)
T ss_pred HHH--HHHHHHHhcCCCEEEEEEECCCcCCc
Confidence 333 37789999999999998766655443
No 119
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=67.81 E-value=46 Score=33.85 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=57.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeee-eEeec-------CCC---ceeEEEe---eCCCCCCceEEEEEecCCchh
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSI-NWRNF-------ADG---WPNLYIN---SAHDIRGQHVAFLASFSSPGV 80 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~-~~~~F-------~dG---E~~v~v~---~~~~vrg~dV~iiqs~~~~~~ 80 (327)
.++.+-.-.+...+|..+|+.+| +++... ...++ |+. +..++++ +...++|++|++|...-.-..
T Consensus 289 ~D~Vv~vPdsg~~~A~~~A~~lg-ip~~~~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~v~gk~VlLVDD~ItTGt 367 (469)
T PRK05793 289 ADIVIGVPDSGIPAAIGYAEASG-IPYGIGFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVNVEGKRVVLIDDSIVRGT 367 (469)
T ss_pred CCEEEEcCccHHHHHHHHHHHhC-CCEeeeEEEeeeccccccChhHhhhhhhheEecccCccccCCCEEEEEccccCchH
Confidence 34444333445689999999996 888542 11221 211 1112222 235689999999987654434
Q ss_pred HHHHHHHHHHhhhcCccceeEeecCCCCCc
Q 020390 81 IFEQISVIYALPRLFVASFTLVLPFFPTGS 110 (327)
Q Consensus 81 l~elll~~~al~~~~a~~i~~viPY~~YsR 110 (327)
-|. -++.+||++||++|.+.+..-|..-
T Consensus 368 Tl~--~~~~~Lr~aGAk~V~~~~~~p~~~~ 395 (469)
T PRK05793 368 TSK--RLVELLRKAGAKEVHFRVSSPPVKY 395 (469)
T ss_pred HHH--HHHHHHHHcCCCEEEEEEECCCcCc
Confidence 333 3788999999999988866555433
No 120
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=65.43 E-value=67 Score=28.48 Aligned_cols=81 Identities=15% Similarity=0.054 Sum_probs=50.3
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCch-hHHHHHHHHHHhhh
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPG-VIFEQISVIYALPR 93 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~-~l~elll~~~al~~ 93 (327)
.++.+=...+.-.+|..+|..|+ +++.-..-.....|+. -.+. ....+|+.|+||..+-.-. .+. -+++.+++
T Consensus 65 ~d~Ivgi~~gG~~~A~~la~~L~-~~~~~~rk~~~~~g~~-~~~~-~~~~~g~~VliVDDvi~tG~Tl~---~~~~~l~~ 138 (202)
T PRK00455 65 FDVVAGPATGGIPLAAAVARALD-LPAIFVRKEAKDHGEG-GQIE-GRRLFGKRVLVVEDVITTGGSVL---EAVEAIRA 138 (202)
T ss_pred CCEEEecccCcHHHHHHHHHHhC-CCEEEEecccCCCCCC-ceEE-ccCCCCCEEEEEecccCCcHHHH---HHHHHHHH
Confidence 34444333567799999999995 8776544333333431 1222 2356799999998876543 333 34677888
Q ss_pred cCccceeE
Q 020390 94 LFVASFTL 101 (327)
Q Consensus 94 ~~a~~i~~ 101 (327)
.|++.+.+
T Consensus 139 ~Ga~~v~~ 146 (202)
T PRK00455 139 AGAEVVGV 146 (202)
T ss_pred cCCEEEEE
Confidence 88876543
No 121
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=65.19 E-value=52 Score=33.23 Aligned_cols=87 Identities=11% Similarity=0.067 Sum_probs=53.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeEe-ec-------CC-CceeEEEe---eCCCCCCceEEEEEecCCchhHH
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWR-NF-------AD-GWPNLYIN---SAHDIRGQHVAFLASFSSPGVIF 82 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~-~F-------~d-GE~~v~v~---~~~~vrg~dV~iiqs~~~~~~l~ 82 (327)
.++.+-.-.+...+|..+|+.+| +++...-++ ++ |. -+..+..+ +...++|++|+||...-.-...+
T Consensus 272 ~D~Vv~VPdsg~~~A~~~a~~lg-ip~~~~l~k~r~~~rtfi~~~qr~~~~~~k~~~~~~~v~gk~VlLVDD~IttGtTl 350 (442)
T PRK08341 272 GDVVIAVPDSGRTAALGFAHESG-IPYMEGLIKNRYIGRTFIMPSGRELKVKLKLSPVREVINGKRVVLVDDSIVRGTTM 350 (442)
T ss_pred CceEEEecCchHHHHHHHHHHhC-CCchheEEEeccccccccCcCchhhhheeeecccccccCCCEEEEEeeeeccHHHH
Confidence 34444333334479999999996 887642222 22 11 22222222 24567899999998754443333
Q ss_pred HHHHHHHHhhhcCccceeEeec
Q 020390 83 EQISVIYALPRLFVASFTLVLP 104 (327)
Q Consensus 83 elll~~~al~~~~a~~i~~viP 104 (327)
. -++++|+++||++|.+.+.
T Consensus 351 ~--~~~~~L~~aGAk~V~~~~~ 370 (442)
T PRK08341 351 K--RIVKMLRDAGAREVHVRIA 370 (442)
T ss_pred H--HHHHHHHhcCCcEEEEEEc
Confidence 3 3678999999999988763
No 122
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=62.43 E-value=1.1e+02 Score=30.87 Aligned_cols=87 Identities=15% Similarity=0.080 Sum_probs=53.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeE------eec--CCCc---eeE--EEe-eCCCCCCceEEEEEecCCchh
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINW------RNF--ADGW---PNL--YIN-SAHDIRGQHVAFLASFSSPGV 80 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~------~~F--~dGE---~~v--~v~-~~~~vrg~dV~iiqs~~~~~~ 80 (327)
.++.+---.+....|..+|+.+| +++...-+ ++| |+.+ ..+ +.. ....++|+.|+||...-.-..
T Consensus 274 ~D~Vv~VP~sg~~~A~~la~~lg-ip~~~~l~r~~~~~r~~i~~~q~~R~~~v~~k~~~~~~~~~gk~v~lvDD~ittG~ 352 (442)
T TIGR01134 274 ADVVIPVPDSGRSAALGFAQASG-IPYREGLIKNRYVGRTFIMPTQELRELSVRLKLNPIREVFRGKRVVLVDDSIVRGT 352 (442)
T ss_pred CEEEEEccCCHHHHHHHHHHHhC-CCchHHeEEeccccccccCCCHHHHHHHHhhhcccccccCCCCEEEEEeccccccH
Confidence 44444333445688999999996 87754222 223 3321 011 111 234678999999987654433
Q ss_pred HHHHHHHHHHhhhcCccceeEeec
Q 020390 81 IFEQISVIYALPRLFVASFTLVLP 104 (327)
Q Consensus 81 l~elll~~~al~~~~a~~i~~viP 104 (327)
-+. -++++|+++||+.|.+++.
T Consensus 353 T~~--~~~~~l~~~ga~~v~~~~~ 374 (442)
T TIGR01134 353 TSR--QIVKMLRDAGAKEVHVRIA 374 (442)
T ss_pred HHH--HHHHHHHHcCCcEEEEEEc
Confidence 322 3668899999999988876
No 123
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=61.21 E-value=1.2e+02 Score=26.80 Aligned_cols=80 Identities=14% Similarity=-0.033 Sum_probs=49.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhc
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRL 94 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~ 94 (327)
.++.+=...+.-.+|..+|..|+ ++..- .++.. |+..+.-. ..-.+|++|+||..+-+...-| ..+++.+++.
T Consensus 59 ~d~Ivgi~~gGi~~A~~la~~L~-~~~i~--~~k~~-~~~~~~~~-~~l~~G~~VLIVDDIi~TG~Tl--~~a~~~l~~~ 131 (187)
T TIGR01367 59 VDFIVGPAMGGVILGYEVARQLS-VRSIF--AEREG-GGMKLRRG-FAVKPGEKFVAVEDVVTTGGSL--LEAIRAIEGQ 131 (187)
T ss_pred CCEEEEEccCcHHHHHHHHHHhC-CCeEE--EEEeC-CcEEEeec-ccCCCCCEEEEEEeeecchHHH--HHHHHHHHHc
Confidence 34444333567799999999995 77533 33333 54332221 1225799999999876654332 2355677899
Q ss_pred CccceeE
Q 020390 95 FVASFTL 101 (327)
Q Consensus 95 ~a~~i~~ 101 (327)
|++.+.+
T Consensus 132 Ga~vv~~ 138 (187)
T TIGR01367 132 GGQVVGL 138 (187)
T ss_pred CCeEEEE
Confidence 9876643
No 124
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=60.92 E-value=20 Score=29.70 Aligned_cols=37 Identities=27% Similarity=0.407 Sum_probs=32.8
Q ss_pred cCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEE
Q 020390 225 EGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 265 (327)
Q Consensus 225 ~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~ 265 (327)
.++++|++++|+ -+|++-..++..|.+.|+++|+++.
T Consensus 7 ~~~l~~~~vlvi----GaGg~ar~v~~~L~~~g~~~i~i~n 43 (135)
T PF01488_consen 7 FGDLKGKRVLVI----GAGGAARAVAAALAALGAKEITIVN 43 (135)
T ss_dssp HSTGTTSEEEEE----SSSHHHHHHHHHHHHTTSSEEEEEE
T ss_pred cCCcCCCEEEEE----CCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 468899999986 4899999999999999999998874
No 125
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=60.62 E-value=80 Score=27.58 Aligned_cols=76 Identities=13% Similarity=0.101 Sum_probs=49.6
Q ss_pred CCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCC-CCceEEEEEecCCc-hhHHHHHHHHHHhhhcCccce-
Q 020390 23 VECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDI-RGQHVAFLASFSSP-GVIFEQISVIYALPRLFVASF- 99 (327)
Q Consensus 23 ~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~v-rg~dV~iiqs~~~~-~~l~elll~~~al~~~~a~~i- 99 (327)
.+.-.+|..+|..|| .++.-..-.+-..|+... +. ..+ +|++|+||-.+-+- ..+. -++++++++|++-+
T Consensus 67 ~ggi~lA~~lA~~l~-~p~~~~rk~~k~yg~~~~-~~--g~~~~g~~VlIVDDvitTG~Tl~---~~~~~l~~~Ga~vv~ 139 (176)
T PRK13812 67 LGAVPLVAVTSVETG-VPYVIARKQAKEYGTGNR-IE--GRLDEGEEVVVLEDIATTGQSAV---DAVEALREAGATVNR 139 (176)
T ss_pred cchHHHHHHHHHHHC-CCEEEEeccCCcCCCCCe-EE--ecCCCcCEEEEEEEeeCCCHHHH---HHHHHHHHCCCeEEE
Confidence 456689999999996 887665554445565333 22 344 79999999887544 3443 35677888887643
Q ss_pred -eEeecC
Q 020390 100 -TLVLPF 105 (327)
Q Consensus 100 -~~viPY 105 (327)
.+++-+
T Consensus 140 ~~vlvdr 146 (176)
T PRK13812 140 VLVVVDR 146 (176)
T ss_pred EEEEEEC
Confidence 334444
No 126
>PLN02293 adenine phosphoribosyltransferase
Probab=60.50 E-value=1.2e+02 Score=26.76 Aligned_cols=75 Identities=11% Similarity=0.058 Sum_probs=46.9
Q ss_pred CCcHHHHHHHHHHcCCceeeeeeEeecCC------------CceeEEEeeCCCC-CCceEEEEEecCCchhHHHHHHHHH
Q 020390 23 VECEELARKVAAQSDLITLQSINWRNFAD------------GWPNLYINSAHDI-RGQHVAFLASFSSPGVIFEQISVIY 89 (327)
Q Consensus 23 ~~~~~la~~ia~~l~~~~~~~~~~~~F~d------------GE~~v~v~~~~~v-rg~dV~iiqs~~~~~~l~elll~~~ 89 (327)
...-.||..+|..|| .++.-+.-.+..+ |+..+.+.. ..+ +|+.|+||..+-....-+ .-+++
T Consensus 71 ~~Gi~lA~~lA~~Lg-~p~v~~rK~~k~~~~~~~~~~~~~~g~~~l~l~~-~~i~~G~rVlIVDDvitTG~T~--~~~~~ 146 (187)
T PLN02293 71 ARGFIFGPPIALAIG-AKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHV-GAVEPGERALVIDDLIATGGTL--CAAIN 146 (187)
T ss_pred CCchHHHHHHHHHHC-CCEEEEEecCCCCCceEEEEEeccCCceEEEEEc-CccCCCCEEEEEeccccchHHH--HHHHH
Confidence 456689999999996 8766444433322 322223332 344 799999998876553321 23557
Q ss_pred HhhhcCccceeE
Q 020390 90 ALPRLFVASFTL 101 (327)
Q Consensus 90 al~~~~a~~i~~ 101 (327)
.++++|++.+.+
T Consensus 147 ~l~~~Ga~~v~~ 158 (187)
T PLN02293 147 LLERAGAEVVEC 158 (187)
T ss_pred HHHHCCCEEEEE
Confidence 888899875544
No 127
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=57.56 E-value=18 Score=32.09 Aligned_cols=94 Identities=14% Similarity=0.121 Sum_probs=57.2
Q ss_pred eCCCCCCceEEEEEecCCc-hhHHHHHHHHHHhhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCC
Q 020390 60 SAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRG 138 (327)
Q Consensus 60 ~~~~vrg~dV~iiqs~~~~-~~l~elll~~~al~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~ 138 (327)
+-.+|.|++++|+..+.+- ..+ .-.++.|++.||++|.++..+-=++- + .. +.|+. +
T Consensus 77 vVGDV~gk~~IIvDDiIdtg~Tl---~~aA~~Lk~~GA~~V~~~aTHgvfs~--------~-----A~-~~l~~-----s 134 (184)
T PF14572_consen 77 VVGDVKGKICIIVDDIIDTGGTL---IKAAELLKERGAKKVYACATHGVFSG--------D-----AP-ERLEE-----S 134 (184)
T ss_dssp EES--TTSEEEEEEEEESSTHHH---HHHHHHHHHTTESEEEEEEEEE---T--------T-----HH-HHHHH-----S
T ss_pred EEEEccCCeEeeecccccchHHH---HHHHHHHHHcCCCEEEEEEeCcccCc--------h-----HH-HHHhh-----c
Confidence 4579999999999998654 333 45788999999999999887654432 1 11 33443 3
Q ss_pred CCCEEEEEeCC--ccccccccCCcccccccccHHHHHHHHhcC
Q 020390 139 GPTSLVIYDIH--ALQERFYFSDHVLPLFETGIPLLKQRLHQL 179 (327)
Q Consensus 139 g~d~vi~vdlH--s~~~~gffn~~v~~l~~~~~~~la~~l~~~ 179 (327)
.+|.|++-|-. ..+.... ..+..+ +.+++||+.|.+.
T Consensus 135 ~Id~vvvTnTIp~~~~~~~~--~Ki~vl--dis~llaeaI~ri 173 (184)
T PF14572_consen 135 PIDEVVVTNTIPQEEQKLQC--PKIKVL--DISPLLAEAIRRI 173 (184)
T ss_dssp SESEEEEETTS--HHHHHH---TTEEEE----HHHHHHHHHHH
T ss_pred CCeEEEEeccccCchhhhcC--CCEeEe--ehHHHHHHHHHHH
Confidence 57999999843 3222111 122222 4588999998764
No 128
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=57.44 E-value=86 Score=27.20 Aligned_cols=77 Identities=22% Similarity=0.132 Sum_probs=46.0
Q ss_pred cCCCCCCeEEEEeccccChhhHHH-HHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCch
Q 020390 225 EGNPAGCHVVIVDDLVQSGGTLIE-CQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTV 303 (327)
Q Consensus 225 ~~~v~gk~viivDDii~TG~Tl~~-~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~ 303 (327)
.++++||+|+||= .|.+.-. +++.|.+.|+ .|. .++.-+ ++-.+.+.++ |-||++=.-|+.-
T Consensus 39 ~~~l~gk~vlViG----~G~~~G~~~a~~L~~~g~-~V~--v~~r~~-~~l~~~l~~a---------DiVIsat~~~~ii 101 (168)
T cd01080 39 GIDLAGKKVVVVG----RSNIVGKPLAALLLNRNA-TVT--VCHSKT-KNLKEHTKQA---------DIVIVAVGKPGLV 101 (168)
T ss_pred CCCCCCCEEEEEC----CcHHHHHHHHHHHhhCCC-EEE--EEECCc-hhHHHHHhhC---------CEEEEcCCCCcee
Confidence 3578999999873 5777566 8999999998 344 344433 3334455554 6677665555421
Q ss_pred hhhcCCCCeEEEech
Q 020390 304 KAIANKAPFEVLSLA 318 (327)
Q Consensus 304 ~~~~~~~k~~v~~va 318 (327)
..-.-.+...++|++
T Consensus 102 ~~~~~~~~~viIDla 116 (168)
T cd01080 102 KGDMVKPGAVVIDVG 116 (168)
T ss_pred cHHHccCCeEEEEcc
Confidence 110112345677765
No 129
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=54.48 E-value=94 Score=27.38 Aligned_cols=74 Identities=19% Similarity=0.152 Sum_probs=45.9
Q ss_pred CCcHHHHHHHHHHcCCceeeeeeEeecCCC------------ceeEEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHH
Q 020390 23 VECEELARKVAAQSDLITLQSINWRNFADG------------WPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIY 89 (327)
Q Consensus 23 ~~~~~la~~ia~~l~~~~~~~~~~~~F~dG------------E~~v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~ 89 (327)
...-.+|..+|..++ .++......+++.. ..+-.+......+|++|+||..+-.. ..+ .-+++
T Consensus 60 ~~Gi~lA~~vA~~l~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~G~rVlIVDDvitTG~T~---~~ai~ 135 (187)
T PRK12560 60 DKGAPLATPVSLLSG-KPLAMARWYPYSLSELNYNVVEIGSEYFEGVVYLNGIEKGDRVAIIDDTLSTGGTV---IALIK 135 (187)
T ss_pred cccHHHHHHHHHhhC-CCEEEeccCCCcccceeEEeeeeeccceeeeeEccCCCCcCEEEEEEeccccCHHH---HHHHH
Confidence 456789999999995 88755443332221 11111222335689999999887554 334 34667
Q ss_pred HhhhcCcccee
Q 020390 90 ALPRLFVASFT 100 (327)
Q Consensus 90 al~~~~a~~i~ 100 (327)
.++++|+..+-
T Consensus 136 ll~~aGa~vv~ 146 (187)
T PRK12560 136 AIENSGGIVSD 146 (187)
T ss_pred HHHHCCCEEEE
Confidence 88899986543
No 130
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=52.68 E-value=75 Score=27.48 Aligned_cols=70 Identities=13% Similarity=0.057 Sum_probs=43.6
Q ss_pred CCcHHHHHHHHHHcCCce-----eeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCch-hHHHHHHHHHHhhhcCc
Q 020390 23 VECEELARKVAAQSDLIT-----LQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPG-VIFEQISVIYALPRLFV 96 (327)
Q Consensus 23 ~~~~~la~~ia~~l~~~~-----~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~-~l~elll~~~al~~~~a 96 (327)
.+.-.+|..+|..|+ .+ +.-+.-.....|+... +. .+..+|+.|+||..+.+.. .+. -+++.++++|+
T Consensus 63 ~gG~~~A~~la~~l~-~~~~~~~~~~~rk~~k~~g~~~~-~~-g~~~~g~~VlIVDDvi~TG~Tl~---~a~~~l~~~Ga 136 (173)
T TIGR00336 63 LGGIPIATAVSVKLA-KPGGDIPLCFNRKEAKDHGEGGN-IE-GELLEGDKVVVVEDVITTGTSIL---EAVEIIQAAGG 136 (173)
T ss_pred cChHHHHHHHHHHhc-CcCCCceEEEEcCCcccCCCCCc-ee-cCCCCCCEEEEEeccccChHHHH---HHHHHHHHcCC
Confidence 446689999999995 76 3332212223354332 22 2345799999999886653 333 45678888887
Q ss_pred cc
Q 020390 97 AS 98 (327)
Q Consensus 97 ~~ 98 (327)
+-
T Consensus 137 ~v 138 (173)
T TIGR00336 137 QV 138 (173)
T ss_pred eE
Confidence 43
No 131
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=49.43 E-value=35 Score=25.16 Aligned_cols=35 Identities=20% Similarity=0.113 Sum_probs=28.5
Q ss_pred CCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEE
Q 020390 227 NPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 227 ~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~ 264 (327)
.-+++.+++++ .+|.....++..|++.|-+.|+.+
T Consensus 53 ~~~~~~iv~~c---~~g~~a~~~~~~l~~~G~~~v~~l 87 (100)
T smart00450 53 LDKDKPVVVYC---RSGNRSAKAAWLLRELGFKNVYLL 87 (100)
T ss_pred CCCCCeEEEEe---CCCcHHHHHHHHHHHcCCCceEEe
Confidence 34678899987 578888999999999999986654
No 132
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=49.42 E-value=31 Score=29.37 Aligned_cols=42 Identities=14% Similarity=0.279 Sum_probs=34.5
Q ss_pred HHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEE
Q 020390 246 LIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWI 295 (327)
Q Consensus 246 l~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~ 295 (327)
+..+.+.|+++|+..|.++ .=|..+.+-++.+++.| +++|+.
T Consensus 80 ~~~lve~lre~G~~~i~v~-~GGvip~~d~~~l~~~G-------~~~if~ 121 (143)
T COG2185 80 VPGLVEALREAGVEDILVV-VGGVIPPGDYQELKEMG-------VDRIFG 121 (143)
T ss_pred HHHHHHHHHHhCCcceEEe-ecCccCchhHHHHHHhC-------cceeeC
Confidence 5568899999999999944 34677777788999998 799993
No 133
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=47.54 E-value=34 Score=28.46 Aligned_cols=59 Identities=22% Similarity=0.268 Sum_probs=41.0
Q ss_pred eEEEEeccc-cChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecC
Q 020390 232 HVVIVDDLV-QSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDS 298 (327)
Q Consensus 232 ~viivDDii-~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnt 298 (327)
+++.+=-+. ++...+...++.|+++|...+.+++ -|...+.-.+.+.+.| +++++.+-|
T Consensus 55 dii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~viv-GG~~~~~~~~~l~~~G-------vd~~~~~gt 114 (132)
T TIGR00640 55 HVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVV-GGVIPPQDFDELKEMG-------VAEIFGPGT 114 (132)
T ss_pred CEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEE-eCCCChHhHHHHHHCC-------CCEEECCCC
Confidence 444444343 3566788899999999987666554 4555555577888888 899996666
No 134
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=46.67 E-value=34 Score=25.65 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=27.8
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 263 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~ 263 (327)
+++.++++.. +|.+...++..|++.|-..|+.
T Consensus 55 ~~~~ivv~c~---~g~~s~~a~~~l~~~G~~~v~~ 86 (96)
T cd01444 55 RDRPVVVYCY---HGNSSAQLAQALREAGFTDVRS 86 (96)
T ss_pred CCCCEEEEeC---CCChHHHHHHHHHHcCCceEEE
Confidence 6778899877 8999999999999999988764
No 135
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=46.47 E-value=1.8e+02 Score=25.99 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=57.6
Q ss_pred CEEEEec-CCcHHHHHHHHHHcCCceeeeeeEeecCC-CceeEE-EeeCCCCCCceEEEEEecCCc-hhHHHHHHHHHHh
Q 020390 16 QVHLFYC-VECEELARKVAAQSDLITLQSINWRNFAD-GWPNLY-INSAHDIRGQHVAFLASFSSP-GVIFEQISVIYAL 91 (327)
Q Consensus 16 ~~~i~~g-~~~~~la~~ia~~l~~~~~~~~~~~~F~d-GE~~v~-v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~al 91 (327)
++.+.+- .+...|.+.+.+.+.+.+.+.+-+.+=+. +|..++ .++++++.++.|+++.++..- ..+ ...++.|
T Consensus 68 ~i~~V~IlRaG~~m~~~~~~~~p~a~~g~i~i~r~~~t~~p~~~y~~LP~~i~~~~VillDpmlaTG~s~---~~ai~~L 144 (207)
T PF14681_consen 68 KICIVPILRAGLPMLEGFREVFPDARVGHIGIQRDEETLEPVLYYNKLPEDIENRKVILLDPMLATGGSA---IAAIEIL 144 (207)
T ss_dssp CEEEEEETTTHHHHHHHHHHHSTTSEEEEEEEEEETTTSSEEEEEEE--TTGTTSEEEEEESEESSSHHH---HHHHHHH
T ss_pred cEEEEEEeCCcHHHHHHHHHhCCCcceEEEEEEEcCCccceeeeHhhCCCCccCCEEEEEeccccchhhH---HHHHHHH
Confidence 5555543 66778999999999888999998877553 443333 347888989999999988654 443 3456677
Q ss_pred hhcCc--cceeEe
Q 020390 92 PRLFV--ASFTLV 102 (327)
Q Consensus 92 ~~~~a--~~i~~v 102 (327)
++.|+ ++|+++
T Consensus 145 ~~~G~~~~~I~~v 157 (207)
T PF14681_consen 145 KEHGVPEENIIIV 157 (207)
T ss_dssp HHTTG-GGEEEEE
T ss_pred HHcCCCcceEEEE
Confidence 77776 566554
No 136
>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose [, ]. More than 1% of the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect [, ]. The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella [, , ]. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 cellular biogenic amine metabolic process
Probab=46.38 E-value=35 Score=29.06 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=33.2
Q ss_pred ccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcc
Q 020390 238 DLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK 281 (327)
Q Consensus 238 Dii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~ 281 (327)
|..++...+..+.+.|+.+|++.|+.+. ..++.+++.|.+-
T Consensus 100 Dl~~~~~~i~~a~~~L~~aG~~~if~vS---~~~~eGi~eL~~~ 140 (143)
T PF10662_consen 100 DLPSDDANIERAKKWLKNAGVKEIFEVS---AVTGEGIEELKDY 140 (143)
T ss_pred cCccchhhHHHHHHHHHHcCCCCeEEEE---CCCCcCHHHHHHH
Confidence 5666778899999999999999997665 6678888877653
No 137
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=46.28 E-value=39 Score=25.66 Aligned_cols=33 Identities=18% Similarity=0.071 Sum_probs=26.7
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~ 264 (327)
++++++++++ +|.....++..|++.|...|+.+
T Consensus 55 ~~~~ivv~c~---~g~~s~~~~~~l~~~G~~~v~~l 87 (96)
T cd01529 55 RATRYVLTCD---GSLLARFAAQELLALGGKPVALL 87 (96)
T ss_pred CCCCEEEEeC---ChHHHHHHHHHHHHcCCCCEEEe
Confidence 5778899864 78888888999999999877553
No 138
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=45.97 E-value=18 Score=28.82 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=48.7
Q ss_pred cCCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHh
Q 020390 12 SQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYAL 91 (327)
Q Consensus 12 ~~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al 91 (327)
.+.+.+.+++..++..+|+..+.+| .+++.....-++.++.. -.....+.-.|++|+-|.+.. --|+.-.+..+
T Consensus 3 ~~~~~i~i~G~G~s~~~A~~~~~~l--~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~vi~is~sg~--~~~~~~~~~~a 76 (131)
T PF01380_consen 3 AKAKRIYIYGSGSSYGVAQYAALKL--QKLGRIVVISYEAGEFF--HGPLENLDPDDLVIIISYSGE--TRELIELLRFA 76 (131)
T ss_dssp TTSSEEEEEESTHHHHHHHHHHHHH--HHHHSSEEEEEEHHHHH--TTGGGGCSTTEEEEEEESSST--THHHHHHHHHH
T ss_pred CCCCEEEEEEcchHHHHHHHHHHHH--HHhcCcceeccchHHHh--hhhcccccccceeEeeecccc--chhhhhhhHHH
Confidence 4567788888888888999988888 34444444444444310 111234555788888885543 22334445577
Q ss_pred hhcCccc
Q 020390 92 PRLFVAS 98 (327)
Q Consensus 92 ~~~~a~~ 98 (327)
|+.|++-
T Consensus 77 k~~g~~v 83 (131)
T PF01380_consen 77 KERGAPV 83 (131)
T ss_dssp HHTTSEE
T ss_pred HhcCCeE
Confidence 8888644
No 139
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=45.06 E-value=44 Score=24.26 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=28.1
Q ss_pred CCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEE
Q 020390 228 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 228 v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~ 264 (327)
-+++.++++++- |.....++..|++.|-..|+.+
T Consensus 48 ~~~~~vv~~c~~---~~~a~~~~~~l~~~G~~~v~~l 81 (89)
T cd00158 48 DKDKPIVVYCRS---GNRSARAAKLLRKAGGTNVYNL 81 (89)
T ss_pred CCCCeEEEEeCC---CchHHHHHHHHHHhCcccEEEe
Confidence 467888888875 7788899999999998887754
No 140
>KOG0814 consensus Glyoxylase [General function prediction only]
Probab=44.99 E-value=26 Score=31.08 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=38.0
Q ss_pred EEeecCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEee
Q 020390 221 VRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 268 (327)
Q Consensus 221 ~~~~~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~ 268 (327)
...+.++.+.+..+|||.++.| ...-++.+++.|-+-+|++-||-
T Consensus 22 ytYll~d~~~~~AviIDPV~et---~~RD~qlikdLgl~LiYa~NTH~ 66 (237)
T KOG0814|consen 22 YTYLLGDHKTGKAVIIDPVLET---VSRDAQLIKDLGLDLIYALNTHV 66 (237)
T ss_pred EEEEeeeCCCCceEEecchhhc---ccchHHHHHhcCceeeeeeccee
Confidence 3456788999999999999975 55677889999999999999985
No 141
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=44.63 E-value=1.1e+02 Score=24.20 Aligned_cols=77 Identities=17% Similarity=0.019 Sum_probs=45.3
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhcC
Q 020390 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLF 95 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~~ 95 (327)
.+.+++..++..+|..++.++. .++. ...-..|+|. +. .....++-.|++|+-|.+.. --|++-+++.+|+.|
T Consensus 2 ~I~i~G~G~S~~~a~~~~~~l~--~~g~-~~~~~~~~~~-~~-~~~~~~~~~d~vi~iS~sG~--t~~~~~~~~~a~~~g 74 (128)
T cd05014 2 KVVVTGVGKSGHIARKIAATLS--STGT-PAFFLHPTEA-LH-GDLGMVTPGDVVIAISNSGE--TDELLNLLPHLKRRG 74 (128)
T ss_pred eEEEEeCcHhHHHHHHHHHHhh--cCCC-ceEEcccchh-hc-cccCcCCCCCEEEEEeCCCC--CHHHHHHHHHHHHCC
Confidence 3567777778888998888883 2332 2233455542 22 11234556789888887643 223344566778888
Q ss_pred ccce
Q 020390 96 VASF 99 (327)
Q Consensus 96 a~~i 99 (327)
++-|
T Consensus 75 ~~vi 78 (128)
T cd05014 75 APII 78 (128)
T ss_pred CeEE
Confidence 6533
No 142
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=43.85 E-value=1.2e+02 Score=31.25 Aligned_cols=85 Identities=9% Similarity=0.048 Sum_probs=51.4
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCceeeeeeEe-ec-----C--CC---ceeEEE--e-eCCCCCCceEEEEEecCCchhH
Q 020390 16 QVHLFYCVECEELARKVAAQSDLITLQSINWR-NF-----A--DG---WPNLYI--N-SAHDIRGQHVAFLASFSSPGVI 81 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~-~F-----~--dG---E~~v~v--~-~~~~vrg~dV~iiqs~~~~~~l 81 (327)
.+.+---.+...+|..+|+.+| +++..--++ ++ - +. +.+++. . ....++|++|+||-....-..-
T Consensus 295 D~VvpVP~s~~~~A~~la~~lg-ip~~~~l~k~~~~~rt~i~~~q~~R~~~vr~~f~~~~~~v~gK~VlLVDDvitTGaT 373 (501)
T PRK09246 295 DVVIPIPDTSRDAALEIARILG-VPYREGFVKNRYVGRTFIMPGQAQRKKSVRQKLNAIRAEFKGKNVLLVDDSIVRGTT 373 (501)
T ss_pred cEEEEeCccHHHHHHHHHHHHC-CCccceEEEEecccccccCcCHHHHHHHHHhhcCCccccccCCeEEEEeccccccHH
Confidence 4444333345689999999996 877532222 12 1 10 001111 1 2456889999999876554443
Q ss_pred HHHHHHHHHhhhcCccceeEee
Q 020390 82 FEQISVIYALPRLFVASFTLVL 103 (327)
Q Consensus 82 ~elll~~~al~~~~a~~i~~vi 103 (327)
+. -++++|+++||++|.+++
T Consensus 374 l~--~~~~~L~~aGA~~V~v~v 393 (501)
T PRK09246 374 SE--QIVQMAREAGAKKVYFAS 393 (501)
T ss_pred HH--HHHHHHHHcCCCEEEEEE
Confidence 33 367899999999987764
No 143
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=43.13 E-value=78 Score=32.56 Aligned_cols=78 Identities=12% Similarity=0.035 Sum_probs=48.8
Q ss_pred CcHHHHHHHHHHcCCceeeeeeEeecCCC-----------cee--EEE-eeCCCCCCceEEEEEecCCchhHHHHHHHHH
Q 020390 24 ECEELARKVAAQSDLITLQSINWRNFADG-----------WPN--LYI-NSAHDIRGQHVAFLASFSSPGVIFEQISVIY 89 (327)
Q Consensus 24 ~~~~la~~ia~~l~~~~~~~~~~~~F~dG-----------E~~--v~v-~~~~~vrg~dV~iiqs~~~~~~l~elll~~~ 89 (327)
+.-.+|..+|+.+| +++...-+++.--| +.. .++ .+.+.++|+.|+||...-.-..-+ --++.
T Consensus 322 sg~~~A~g~A~~lg-ip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~~~~~~~gkrVlLVDDvIttGtTl--~~~~~ 398 (500)
T PRK07349 322 SGIPAAIGFSQASG-IPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDVLAGKRIIIVDDSIVRGTTS--RKIVK 398 (500)
T ss_pred ccHHHHHHHHHHHC-CCchhceEEEeccCccccCCCHHHHHhhhheeeeccccccCCCEEEEEeceeCCcHHH--HHHHH
Confidence 34578999999996 88864333321111 101 111 134567899999998754443332 23678
Q ss_pred HhhhcCccceeEeec
Q 020390 90 ALPRLFVASFTLVLP 104 (327)
Q Consensus 90 al~~~~a~~i~~viP 104 (327)
+||++||+.|.+-+-
T Consensus 399 ~Lr~aGAkeV~~~i~ 413 (500)
T PRK07349 399 ALRDAGATEVHMRIS 413 (500)
T ss_pred HHHHhCCeEEEEEeC
Confidence 999999999877643
No 144
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=42.08 E-value=79 Score=25.08 Aligned_cols=80 Identities=9% Similarity=-0.058 Sum_probs=45.6
Q ss_pred EEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhcCc
Q 020390 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFV 96 (327)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~~a 96 (327)
+.+++..++...|...+.+|. .++...+.-++.+|... . .......|++|+-|.+.. --|++-+++.+++.|+
T Consensus 2 I~i~G~G~S~~~a~~~~~~l~--~~~~~~~~~~~~~~~~~--~-~~~~~~~d~~I~iS~sG~--t~e~~~~~~~a~~~g~ 74 (126)
T cd05008 2 ILIVGCGTSYHAALVAKYLLE--RLAGIPVEVEAASEFRY--R-RPLLDEDTLVIAISQSGE--TADTLAALRLAKEKGA 74 (126)
T ss_pred EEEEEccHHHHHHHHHHHHHH--HhcCCceEEEehhHhhh--c-CCCCCCCcEEEEEeCCcC--CHHHHHHHHHHHHcCC
Confidence 445555566677777777773 33333333344443222 1 123556888888886543 2245667788888886
Q ss_pred cceeEeec
Q 020390 97 ASFTLVLP 104 (327)
Q Consensus 97 ~~i~~viP 104 (327)
++.++..
T Consensus 75 -~vi~iT~ 81 (126)
T cd05008 75 -KTVAITN 81 (126)
T ss_pred -eEEEEEC
Confidence 4444443
No 145
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=40.37 E-value=93 Score=28.24 Aligned_cols=133 Identities=16% Similarity=0.246 Sum_probs=55.3
Q ss_pred HHHHhcCCCCCCcEEEecCCChhHhHHhhhcCCCeEEEeeeeeCCccEEE-eecCCCC-CCeEEEEeccccChhh-----
Q 020390 173 KQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPTVVCAKVREGDKRIVR-IKEGNPA-GCHVVIVDDLVQSGGT----- 245 (327)
Q Consensus 173 a~~l~~~~~~~~~viV~pd~G~~~ra~~~a~~~~~~~~~K~R~~~~~~~~-~~~~~v~-gk~viivDDii~TG~T----- 245 (327)
|+.+.+. +.+.||-.....+-+-...++.+++..--.+..+.+..... .++.-++ .-.+++||++.=|..-
T Consensus 26 a~~l~~~--G~DVViG~vethgR~et~~l~~gLe~iP~~~i~y~g~~~~E~DldaiL~R~P~vvLVDELAHtN~pgsr~~ 103 (211)
T PF02702_consen 26 AHRLKEQ--GVDVVIGYVETHGRPETEALLEGLEVIPRKKIEYRGRTLEEMDLDAILARRPQVVLVDELAHTNAPGSRHK 103 (211)
T ss_dssp HHHHHHT--T--EEEEE---TT-HHHHHHHCTS-B---EEEEETTEEEEE--HHHHHHH--SEEEES-TT-B--TT-SSS
T ss_pred HHHHHHC--CCCEEEEEecCCCcHHHHHHHcCCCcCCCeeEeeCCEecccCCHHHHHhcCCCEEEeCcccccCCCCCCCc
Confidence 3345543 33344333455566666667777664222222233322111 1122222 2378999999887542
Q ss_pred -HHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCeEEEechHH
Q 020390 246 -LIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGS 320 (327)
Q Consensus 246 -l~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~~v~~va~~ 320 (327)
=-+=++.|.++| |.+++|--+--=+.+.-+-+. |..+-+..|+|... ....+.++.||+.|-
T Consensus 104 kR~qDVeeLL~aG---IdV~TTlNvqHlESlnd~V~~--------iTgv~vrEtVPD~~--l~~Adev~lVDi~Pe 166 (211)
T PF02702_consen 104 KRYQDVEELLDAG---IDVYTTLNVQHLESLNDVVEQ--------ITGVRVRETVPDSV--LDRADEVELVDITPE 166 (211)
T ss_dssp BHHHHHHHHHHTT----EEEEEEEGGGBGGGHHHHHH--------HHS----S-B-HHH--HHT-SCEEEB---HH
T ss_pred ccHHhHHHHHHCC---CeEEEeeeHHHhhhhHHHHHH--------HhCCeeeeeCCHHH--HhhcCeEEEecCCHH
Confidence 234456677888 556665444222222222222 67788889998754 245678999999985
No 146
>cd05009 SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=40.15 E-value=1e+02 Score=25.12 Aligned_cols=88 Identities=8% Similarity=-0.089 Sum_probs=53.5
Q ss_pred hcCCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHH
Q 020390 11 KSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYA 90 (327)
Q Consensus 11 ~~~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~a 90 (327)
..+.+.+.+++..++-..|...+.++ .+.+.+...-|.++| ..-...+.+...+++|+-|.... .--++.-++..
T Consensus 10 ~~~~~~i~~~G~G~s~~~a~e~~~kl--~e~~~i~~~~~~~~e--~~hg~~~~~~~~~~vi~is~~g~-t~~~~~~~~~~ 84 (153)
T cd05009 10 LKEAKSFYVLGRGPNYGTALEGALKL--KETSYIHAEAYSAGE--FKHGPIALVDEGTPVIFLAPEDR-LEEKLESLIKE 84 (153)
T ss_pred HhccCcEEEEcCCCCHHHHHHHHHHH--HHHHhhcceeccHHH--hccChhhhccCCCcEEEEecCCh-hHHHHHHHHHH
Confidence 34556777777667888888888887 456666777777776 32232345555666666664332 12223446677
Q ss_pred hhhcCccceeEeec
Q 020390 91 LPRLFVASFTLVLP 104 (327)
Q Consensus 91 l~~~~a~~i~~viP 104 (327)
+++.|+ ++.++..
T Consensus 85 ~~~~~~-~vi~it~ 97 (153)
T cd05009 85 VKARGA-KVIVITD 97 (153)
T ss_pred HHHcCC-EEEEEec
Confidence 888775 4444443
No 147
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=39.70 E-value=1.5e+02 Score=22.26 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=25.3
Q ss_pred eEEEEeccccChhhHHHHHHHHHHc-CCCeEEEEE
Q 020390 232 HVVIVDDLVQSGGTLIECQKVLAAH-GAAKVSAYV 265 (327)
Q Consensus 232 ~viivDDii~TG~Tl~~~~~~L~~~-GA~~v~~~~ 265 (327)
.+.+++|...+=..+..+.+.|++. +..++.++.
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~ 47 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVF 47 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEE
Confidence 5677777888889999999999987 556666655
No 148
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=38.99 E-value=53 Score=25.04 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=23.5
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCC
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAA 259 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~ 259 (327)
+++.++++ |.+|.....+++.|++.|..
T Consensus 60 ~~~~ivv~---C~~G~rs~~aa~~L~~~G~~ 87 (100)
T cd01523 60 DDQEVTVI---CAKEGSSQFVAELLAERGYD 87 (100)
T ss_pred CCCeEEEE---cCCCCcHHHHHHHHHHcCce
Confidence 46677775 78999999999999999986
No 149
>PRK11595 DNA utilization protein GntX; Provisional
Probab=38.18 E-value=1e+02 Score=27.87 Aligned_cols=40 Identities=23% Similarity=0.261 Sum_probs=29.7
Q ss_pred CCCCCCceEEEEEecCCchhHHHHHHHHHHhhhcCccceeEe
Q 020390 61 AHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLV 102 (327)
Q Consensus 61 ~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~~a~~i~~v 102 (327)
..++.|++|+||....+-...| .-..++|+++|+++|.++
T Consensus 182 ~~~~~~~~vllvDDv~tTG~Tl--~~~~~~L~~~g~~~V~~~ 221 (227)
T PRK11595 182 ELPVQGQHMAIVDDVVTTGSTV--AEIAQLLLRNGAASVQVW 221 (227)
T ss_pred CCCCCCCEEEEEeeeecchHHH--HHHHHHHHHcCCcEEEEE
Confidence 3568899999998877654432 246778899999988765
No 150
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=35.31 E-value=2.2e+02 Score=25.39 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=50.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCC-----CceeEEEeeCCC-CCCceEEEEEecCCchhHHHHH
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFAD-----GWPNLYINSAHD-IRGQHVAFLASFSSPGVIFEQI 85 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~d-----GE~~v~v~~~~~-vrg~dV~iiqs~~~~~~l~ell 85 (327)
+.++.|--+.+---.|+-+|..||-.++.-+.+..+.+ ||.++.-.+.-+ ++|+.|+||-...+-.+-|++.
T Consensus 29 ~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y~~~~~~~~~~~v~~~~~~d~l~GkkVLIVDDI~DTG~Tl~~a 106 (192)
T COG2236 29 KPDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHYDETAERDGEAKVKYPITIDPLSGKKVLIVDDIVDTGETLELA 106 (192)
T ss_pred CCCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEehhhcccCCcceeecCccccccCCCeEEEEecccCchHhHHHH
Confidence 46666655666678899999999723778888887766 343443344445 8999999999987665554433
No 151
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=34.96 E-value=1.8e+02 Score=25.06 Aligned_cols=18 Identities=11% Similarity=0.010 Sum_probs=13.0
Q ss_pred EecCCc-HHHHHHHHHHcC
Q 020390 20 FYCVEC-EELARKVAAQSD 37 (327)
Q Consensus 20 ~~g~~~-~~la~~ia~~l~ 37 (327)
.|.+.| ..+|+.|++.|+
T Consensus 5 sS~TGNTkkvA~aI~~~l~ 23 (160)
T PF12641_consen 5 SSRTGNTKKVAEAIAEALG 23 (160)
T ss_pred ECCCChHHHHHHHHHHHCC
Confidence 333444 489999999997
No 152
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=34.83 E-value=74 Score=24.32 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=26.5
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~ 264 (327)
+++.++++. .+|..-..++..|++.|.+.|+.+
T Consensus 60 ~~~~ivvyC---~~G~rs~~a~~~L~~~G~~~v~~l 92 (101)
T cd01518 60 KGKKVLMYC---TGGIRCEKASAYLKERGFKNVYQL 92 (101)
T ss_pred CCCEEEEEC---CCchhHHHHHHHHHHhCCcceeee
Confidence 677888885 478888888999999999877553
No 153
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=32.89 E-value=2.6e+02 Score=25.09 Aligned_cols=71 Identities=14% Similarity=0.035 Sum_probs=44.4
Q ss_pred CcHHHHHHHHHHcCCceeeeeeEeecCCCcee-EEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHHHhhhcCccce
Q 020390 24 ECEELARKVAAQSDLITLQSINWRNFADGWPN-LYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVASF 99 (327)
Q Consensus 24 ~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~-v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~al~~~~a~~i 99 (327)
..-.+|..+|..++ .++....-..--.|+.. +++. ....+|++|+||...-+- ..+.+ .+++++++|++-+
T Consensus 77 ~Gi~~A~~vA~~l~-~p~~~~RK~~K~~G~~~~~~~~-g~~~~g~~VlIVDDViTTG~Ti~~---a~~~L~~~G~~vv 149 (206)
T PRK13809 77 TALTLATSISLKYN-IPMVLRRKELKNVDPSDAIKVE-GLFTPGQTCLVINDMVSSGKSIIE---TAVALEEEGLVVR 149 (206)
T ss_pred ccHHHHHHHHHHhC-CCEEEEeCCCCCCCCcCEEEEc-cccCCCCEEEEEEeccccCHHHHH---HHHHHHHCCCEEE
Confidence 35589999999995 88775544222335432 2222 123589999999887544 34433 5667788887643
No 154
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=32.24 E-value=1.8e+02 Score=25.82 Aligned_cols=71 Identities=18% Similarity=0.104 Sum_probs=47.2
Q ss_pred CcHHHHHHHHHHcCCceeeeeeEeecCC-------CceeEEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHHHhhhcC
Q 020390 24 ECEELARKVAAQSDLITLQSINWRNFAD-------GWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLF 95 (327)
Q Consensus 24 ~~~~la~~ia~~l~~~~~~~~~~~~F~d-------GE~~v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~al~~~~ 95 (327)
+--+||-.+|..|| .++.-..=++|-. |- +.=++ .+|.|++++|+...-+. ..++| .+..+++.|
T Consensus 96 sGvPlAtmvA~elg-~elaiY~PrK~~~de~~~~~G~--iS~NF-a~V~gK~cvIVDDvittG~Ti~E---~Ie~lke~g 168 (203)
T COG0856 96 SGVPLATMVAYELG-KELAIYHPRKHRKDEGAGKGGS--ISSNF-ASVEGKRCVIVDDVITTGSTIKE---TIEQLKEEG 168 (203)
T ss_pred cCccHHHHHHHHhC-CceEEEecccccccccCCcCce--eeccc-ccccCceEEEEecccccChhHHH---HHHHHHHcC
Confidence 34579999999996 7776555444433 32 21122 57899999999887554 56776 456888888
Q ss_pred ccceeE
Q 020390 96 VASFTL 101 (327)
Q Consensus 96 a~~i~~ 101 (327)
++-+.+
T Consensus 169 ~kpv~v 174 (203)
T COG0856 169 GKPVLV 174 (203)
T ss_pred CCcEEE
Confidence 865433
No 155
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=32.05 E-value=93 Score=24.93 Aligned_cols=81 Identities=10% Similarity=-0.088 Sum_probs=44.1
Q ss_pred EEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhcCc
Q 020390 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFV 96 (327)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~~a 96 (327)
+.+++..+|...|.....++ ..+....+.-+.+.|... . ....+...|++|+-|.+.. --|++-.++.+|+.|+
T Consensus 2 I~i~G~G~S~~~A~~~~~~l--~~~~~~~~~~~~~~~~~~-~-~~~~~~~~dl~I~iS~SG~--t~~~~~~~~~a~~~g~ 75 (120)
T cd05710 2 VFFVGCGGSLADMYPAKYFL--KKESKLPVFVYNAAEFLH-T-GPKRLTEKSVVILASHSGN--TKETVAAAKFAKEKGA 75 (120)
T ss_pred EEEEEecHHHHHHhHHHHHH--HHhcCCceEEEcHHHHhh-c-CcccCCCCcEEEEEeCCCC--ChHHHHHHHHHHHcCC
Confidence 34444445555556555555 233345555666665321 1 1234555788888886643 2234456677888886
Q ss_pred cceeEeec
Q 020390 97 ASFTLVLP 104 (327)
Q Consensus 97 ~~i~~viP 104 (327)
++.++..
T Consensus 76 -~vi~iT~ 82 (120)
T cd05710 76 -TVIGLTD 82 (120)
T ss_pred -eEEEEEC
Confidence 4455544
No 156
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=32.00 E-value=89 Score=23.84 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=26.9
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~ 264 (327)
+++.++++.+ +|.....++..|++.|...|+.+
T Consensus 57 ~~~~vv~~c~---~g~rs~~~~~~l~~~G~~~v~~l 89 (101)
T cd01528 57 PDKDIVVLCH---HGGRSMQVAQWLLRQGFENVYNL 89 (101)
T ss_pred CCCeEEEEeC---CCchHHHHHHHHHHcCCccEEEe
Confidence 5778898854 68888899999999999887654
No 157
>PRK15482 transcriptional regulator MurR; Provisional
Probab=31.92 E-value=75 Score=29.57 Aligned_cols=82 Identities=10% Similarity=0.006 Sum_probs=50.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhh
Q 020390 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP 92 (327)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~ 92 (327)
+.+.+.+|+..++..+|..++.+|. .++. .+.-++|+. ........+...||+|+-|.+.. --|++-+++.++
T Consensus 134 ~A~~I~i~G~G~S~~~A~~l~~~l~--~~g~-~~~~~~d~~--~~~~~~~~~~~~Dv~i~iS~sg~--t~~~~~~~~~a~ 206 (285)
T PRK15482 134 KAPFIQITGLGGSALVGRDLSFKLM--KIGY-RVACEADTH--VQATVSQALKKGDVQIAISYSGS--KKEIVLCAEAAR 206 (285)
T ss_pred hCCeeEEEEeChhHHHHHHHHHHHH--hCCC-eeEEeccHh--HHHHHHhcCCCCCEEEEEeCCCC--CHHHHHHHHHHH
Confidence 4567888888888889999988873 2332 233345543 11111234556799999887643 223445667788
Q ss_pred hcCccceeEe
Q 020390 93 RLFVASFTLV 102 (327)
Q Consensus 93 ~~~a~~i~~v 102 (327)
+.|++ +.++
T Consensus 207 ~~g~~-iI~I 215 (285)
T PRK15482 207 KQGAT-VIAI 215 (285)
T ss_pred HCCCE-EEEE
Confidence 88864 4444
No 158
>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.
Probab=31.65 E-value=79 Score=23.88 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=24.5
Q ss_pred CCCeEEEEeccccChhh--HHHHHHHHHHcCCCeEEE
Q 020390 229 AGCHVVIVDDLVQSGGT--LIECQKVLAAHGAAKVSA 263 (327)
Q Consensus 229 ~gk~viivDDii~TG~T--l~~~~~~L~~~GA~~v~~ 263 (327)
+++.++++. .+|.. ...++..|++.|-+.|+.
T Consensus 49 ~~~~ivl~c---~~G~~~~s~~aa~~L~~~G~~~v~~ 82 (92)
T cd01532 49 RDTPIVVYG---EGGGEDLAPRAARRLSELGYTDVAL 82 (92)
T ss_pred CCCeEEEEe---CCCCchHHHHHHHHHHHcCccCEEE
Confidence 466788885 46654 578899999999998874
No 159
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=31.31 E-value=81 Score=24.09 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=27.2
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~ 264 (327)
+++.+++++ .+|.+...++..|+..|-+.|+.+
T Consensus 65 ~~~~ivv~c---~~g~~s~~~~~~l~~~G~~~v~~~ 97 (106)
T cd01519 65 KDKELIFYC---KAGVRSKAAAELARSLGYENVGNY 97 (106)
T ss_pred CCCeEEEEC---CCcHHHHHHHHHHHHcCCccceec
Confidence 577888884 578888889999999999887654
No 160
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=31.23 E-value=46 Score=31.46 Aligned_cols=53 Identities=13% Similarity=-0.018 Sum_probs=37.5
Q ss_pred cChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCCc
Q 020390 241 QSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLT 302 (327)
Q Consensus 241 ~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~ 302 (327)
|.|+|-...++.+++.++..+.++..|++|-+.+...+-+. ..+|.|++=...
T Consensus 96 Dv~S~K~~v~~a~~~~~~~~~~~vg~HPM~G~~~~~~lf~~---------~~~vltp~~~~~ 148 (279)
T COG0287 96 DVGSVKSSVVEAMEKYLPGDVRFVGGHPMFGPEADAGLFEN---------AVVVLTPSEGTE 148 (279)
T ss_pred ecccccHHHHHHHHHhccCCCeeEecCCCCCCcccccccCC---------CEEEEcCCCCCC
Confidence 36777777788888888776699999999977533333332 578888885443
No 161
>TIGR00393 kpsF KpsF/GutQ family protein. This model describes a number of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. One is GutQ, a protein of the glucitol operon. Another is KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of E. coli.
Probab=30.38 E-value=1.4e+02 Score=27.20 Aligned_cols=78 Identities=13% Similarity=0.063 Sum_probs=47.4
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhcC
Q 020390 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLF 95 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~~ 95 (327)
.+.+|+..+|..+|+..+.+| ..+++. +.-+.|.+... .....+...|++|+-|.+.. --+++-++..+|+.|
T Consensus 2 rI~i~G~G~S~~~a~~~~~~l--~~~g~~-~~~~~~~~~~~--~~~~~~~~~d~~i~iS~sG~--t~~~~~~~~~a~~~g 74 (268)
T TIGR00393 2 KLVIVGIGKSGLIGKKIVATF--ASTGTP-SFFLHPTEAMH--GDLGMVEPNDVVLMISYSGE--SLELLNLIPHLKRLS 74 (268)
T ss_pred cEEEEecChHHHHHHHHHHHH--HhcCCc-eEEeCHhHHhh--cccCCCCCCCEEEEEeCCCC--CHHHHHHHHHHHHcC
Confidence 456777667788889888877 233332 22345554221 11245666889999887643 223455677888888
Q ss_pred cccee
Q 020390 96 VASFT 100 (327)
Q Consensus 96 a~~i~ 100 (327)
++-|.
T Consensus 75 ~~ii~ 79 (268)
T TIGR00393 75 HKIIA 79 (268)
T ss_pred CcEEE
Confidence 75443
No 162
>PF04015 DUF362: Domain of unknown function (DUF362) ; InterPro: IPR007160 This domain is found in some iron-sulphur proteins.
Probab=30.08 E-value=1.4e+02 Score=26.33 Aligned_cols=83 Identities=12% Similarity=0.107 Sum_probs=50.5
Q ss_pred cccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcC----EEEEecCCCCchhhhcCCCCeEE
Q 020390 239 LVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFA----NFWITDSCPLTVKAIANKAPFEV 314 (327)
Q Consensus 239 ii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~----~iv~Tnti~~~~~~~~~~~k~~v 314 (327)
+.|.=..+..+++.|+++|+++|.+...-+....+..+.++.+|.+.+ .+ +++-.|.-+...........+..
T Consensus 18 ~~T~P~vv~avv~~l~~~g~~~i~i~e~~~~~~~~~~~~~~~~G~~~~---~~~~g~~~v~~~~~~~~~~~~~~~~~~~~ 94 (206)
T PF04015_consen 18 ATTHPEVVRAVVEMLKEAGAKEIIIAESPGSGAADTREVFKRSGYEEI---AEEYGAELVDLDDEPWVEVPLPGGEHLKE 94 (206)
T ss_pred ccCCHHHHHHHHHHHHHcCCCceEEEeCCCcchHhHHHHHHHcchhhH---HHhcCCcEEEccCCcccceeccCCeeeee
Confidence 455566788899999999999887776333221244555555543211 22 66777766643321112345778
Q ss_pred EechHHHHHh
Q 020390 315 LSLAGSIADA 324 (327)
Q Consensus 315 ~~va~~la~~ 324 (327)
+.++..++++
T Consensus 95 ~~v~~~~~ea 104 (206)
T PF04015_consen 95 FKVPRILLEA 104 (206)
T ss_pred EEhhHHHHhC
Confidence 8888888874
No 163
>PLN02501 digalactosyldiacylglycerol synthase
Probab=29.50 E-value=1e+02 Score=33.39 Aligned_cols=88 Identities=16% Similarity=0.140 Sum_probs=50.6
Q ss_pred ecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc----hhHHHHHHHHHHhhhcCc
Q 020390 21 YCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP----GVIFEQISVIYALPRLFV 96 (327)
Q Consensus 21 ~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~----~~l~elll~~~al~~~~a 96 (327)
..+++.+|--+||+-+. . .=.+|-+|=..=.-...-.-.+++|.|+-+-+-| ..+.-|+..+.-++. |-
T Consensus 283 ~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~r~~~ivTtAslPWmTGtavnpL~rAayLa~~-~~ 355 (794)
T PLN02501 283 SDNHNDELDLRIASVLQ-S-----TGHCYDGGFWTDSSKHELSDGKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKS-AK 355 (794)
T ss_pred cccccccchhhhhhhhh-c-----cCccccCCcccCccccccccCCCeEEEEEcccCcccccccccHHHHHHHhccc-CC
Confidence 34555677878888774 2 1133444411000010001125899888777666 345556666655554 55
Q ss_pred cceeEeecCCCCCcchhhc
Q 020390 97 ASFTLVLPFFPTGSFERME 115 (327)
Q Consensus 97 ~~i~~viPY~~YsRqdr~~ 115 (327)
.+||+|+|+++.+-|...+
T Consensus 356 ~~VtlviPWl~~~dq~~vy 374 (794)
T PLN02501 356 QNVTLLVPWLCKSDQELVY 374 (794)
T ss_pred ceEEEEEecCCcccccccc
Confidence 7999999999976565544
No 164
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=29.49 E-value=33 Score=31.66 Aligned_cols=91 Identities=14% Similarity=0.085 Sum_probs=53.8
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCc---------eeEEE-----eeCCCCCCceEEEEEecCC----
Q 020390 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGW---------PNLYI-----NSAHDIRGQHVAFLASFSS---- 77 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE---------~~v~v-----~~~~~vrg~dV~iiqs~~~---- 77 (327)
.+-++..++|..+-.+..+.+. -.=..+...|+|-+. +.-.+ .+..+. +-||+.+..++.
T Consensus 9 riGlIvpssn~t~E~e~~~~~~-p~~v~~h~sRi~~~~~vt~e~L~~m~~~l~~aa~~ll~~a-~~dvi~~~cTsgs~~~ 86 (239)
T TIGR02990 9 RIGLVILATDHTSERDFARMVA-SDRIGVYVNRIPYANPTTPENLRKMQPRLTEAAALILPDE-ELDVVAYSCTSASVVI 86 (239)
T ss_pred eEEEEECCCCCchHHHHHHHhC-cCCeEEEEeceeCCCCCCHHHHHHHhhhHHHHHHHhcCCC-CCCEEEEccchhheec
Confidence 4556677888888888887762 122345555665320 00000 111111 357877776653
Q ss_pred -chhHHHHH--------------HHHHHhhhcCccceeEeecCCCC
Q 020390 78 -PGVIFEQI--------------SVIYALPRLFVASFTLVLPFFPT 108 (327)
Q Consensus 78 -~~~l~ell--------------l~~~al~~~~a~~i~~viPY~~Y 108 (327)
++.+.+.+ -+++||+..|++||-++-||.+.
T Consensus 87 G~~~~~~~i~~~~~g~p~tt~~~A~~~AL~alg~~RIalvTPY~~~ 132 (239)
T TIGR02990 87 GDDEVTRAINAAKPGTPVVTPSSAAVDGLAALGVRRISLLTPYTPE 132 (239)
T ss_pred CHHHHHHHHHhcCCCCCeeCHHHHHHHHHHHcCCCEEEEECCCcHH
Confidence 23333333 36789999999999999999865
No 165
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=29.27 E-value=3.2e+02 Score=27.90 Aligned_cols=90 Identities=10% Similarity=-0.006 Sum_probs=53.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCceeeeeeE-e-----ecC--CC---ceeEE--Ee-eCCCCCCceEEEEEecCCch
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINW-R-----NFA--DG---WPNLY--IN-SAHDIRGQHVAFLASFSSPG 79 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~-~-----~F~--dG---E~~v~--v~-~~~~vrg~dV~iiqs~~~~~ 79 (327)
+.++.+---.+...+|..+|+.+| +++...-+ + .|. +. +.+++ +. +.+.++|+.|++|.....-.
T Consensus 283 ~~D~vv~VP~s~~~~A~~~a~~~g-ip~~~~lik~~~~~rt~~~~~~~~R~~~v~~~f~~~~~~i~gk~VlLVDDvittG 361 (471)
T PRK06781 283 EADVVTGVPDSSISAAIGYAEATG-IPYELGLIKNRYVGRTFIQPSQELREQGVKMKLSAVRGVVEGKRVVMIDDSIVRG 361 (471)
T ss_pred CCcEEEEcChhHHHHHHHHHHHhC-CCcccceEEEccCCCCCcCCCHHHHHHHHhcceeccccccCCceEEEEeceeccc
Confidence 344444333345688999999996 87754211 1 222 21 11121 11 24568899999997654433
Q ss_pred hHHHHHHHHHHhhhcCccceeEeecCC
Q 020390 80 VIFEQISVIYALPRLFVASFTLVLPFF 106 (327)
Q Consensus 80 ~l~elll~~~al~~~~a~~i~~viPY~ 106 (327)
..+. -++.+||++||++|.+.+---
T Consensus 362 tTl~--~~~~~Lk~aGA~eV~v~i~sP 386 (471)
T PRK06781 362 TTSK--RIVRMLREAGATEVHVRIASP 386 (471)
T ss_pred hHHH--HHHHHHHHcCCcEEEEEECCC
Confidence 3332 477899999999998876433
No 166
>PF08410 DUF1737: Domain of unknown function (DUF1737); InterPro: IPR013619 This domain of unknown function is found at the N terminus of bacterial and viral hypothetical proteins.
Probab=28.83 E-value=1.7e+02 Score=20.74 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=27.3
Q ss_pred CEEEEecCCcHHHHHHHHHHcC-CceeeeeeEeecCCC
Q 020390 16 QVHLFYCVECEELARKVAAQSD-LITLQSINWRNFADG 52 (327)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~l~-~~~~~~~~~~~F~dG 52 (327)
...+++|++...|+++|.+.|. |..+.-.-.-.|+.+
T Consensus 5 ~Yr~lt~~d~~~fc~rVt~aL~~GW~l~GsP~~t~~~~ 42 (54)
T PF08410_consen 5 HYRVLTGPDDSAFCHRVTEALNEGWQLYGSPTYTFDGG 42 (54)
T ss_pred eeEEEECCChHHHHHHHHHHHHcCCEecCCceEEECCC
Confidence 3789999999999999999882 255555555556553
No 167
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=28.71 E-value=95 Score=23.48 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=25.1
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 263 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~ 263 (327)
+++.+++ ++.+|.....++..|++.|...|+.
T Consensus 53 ~~~~iv~---~c~~g~~s~~~~~~L~~~g~~~v~~ 84 (99)
T cd01527 53 GANAIIF---HCRSGMRTQQNAERLAAISAGEAYV 84 (99)
T ss_pred CCCcEEE---EeCCCchHHHHHHHHHHcCCccEEE
Confidence 4566666 4788998999999999999886554
No 168
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=28.30 E-value=1.1e+02 Score=28.66 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=30.7
Q ss_pred CCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEE
Q 020390 227 NPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 265 (327)
Q Consensus 227 ~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~ 265 (327)
+++||+++|+ -+|++-..++..|.+.|+++|+++.
T Consensus 122 ~~~~k~vlvl----GaGGaarai~~aL~~~G~~~i~I~n 156 (282)
T TIGR01809 122 PLAGFRGLVI----GAGGTSRAAVYALASLGVTDITVIN 156 (282)
T ss_pred ccCCceEEEE----cCcHHHHHHHHHHHHcCCCeEEEEe
Confidence 4689999876 6899999999999999999998875
No 169
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=28.16 E-value=1.2e+02 Score=23.84 Aligned_cols=85 Identities=14% Similarity=0.048 Sum_probs=50.3
Q ss_pred cCCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHh
Q 020390 12 SQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYAL 91 (327)
Q Consensus 12 ~~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al 91 (327)
.+.+.+.+|+...+..+|...+..|. .+++ ....+++.+.. . .....+...+++|+-|..... .+++-+++.+
T Consensus 11 ~~~~~i~i~g~g~s~~~a~~~~~~l~--~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~i~iS~~g~~--~~~~~~~~~a 83 (139)
T cd05013 11 AKARRIYIFGVGSSGLVAEYLAYKLL--RLGK-PVVLLSDPHLQ-L-MSAANLTPGDVVIAISFSGET--KETVEAAEIA 83 (139)
T ss_pred HhCCEEEEEEcCchHHHHHHHHHHHH--HcCC-ceEEecCHHHH-H-HHHHcCCCCCEEEEEeCCCCC--HHHHHHHHHH
Confidence 34567888888788889999988883 3433 33344555321 1 111233446788887765432 2344556778
Q ss_pred hhcCccceeEeec
Q 020390 92 PRLFVASFTLVLP 104 (327)
Q Consensus 92 ~~~~a~~i~~viP 104 (327)
++.|+ ++.++..
T Consensus 84 ~~~g~-~iv~iT~ 95 (139)
T cd05013 84 KERGA-KVIAITD 95 (139)
T ss_pred HHcCC-eEEEEcC
Confidence 88886 4445544
No 170
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=27.83 E-value=3e+02 Score=28.91 Aligned_cols=69 Identities=14% Similarity=0.158 Sum_probs=0.0
Q ss_pred CCceEEEEEecCCchhHHHHHHHHHHhhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEE
Q 020390 65 RGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLV 144 (327)
Q Consensus 65 rg~dV~iiqs~~~~~~l~elll~~~al~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi 144 (327)
+++.+.|+.. ++-|=+--.-++..++++.|+..+...+| .++.+|--++...+-++.+. |++-||
T Consensus 68 ~~e~I~I~gD-yD~DGitstail~~~L~~~g~~~~~~~IP--------~R~~eGYGl~~~~i~~~~~~------~~~LiI 132 (575)
T PRK11070 68 EGTRIIVVGD-FDADGATSTALSVLALRSLGCSNVDYLVP--------NRFEDGYGLSPEVVDQAHAR------GAQLIV 132 (575)
T ss_pred CCCEEEEEEe-cCccHHHHHHHHHHHHHHcCCCceEEEeC--------CCCcCCCCCCHHHHHHHHhc------CCCEEE
Q ss_pred EEeC
Q 020390 145 IYDI 148 (327)
Q Consensus 145 ~vdl 148 (327)
|||.
T Consensus 133 tvD~ 136 (575)
T PRK11070 133 TVDN 136 (575)
T ss_pred EEcC
No 171
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=27.82 E-value=1.1e+02 Score=29.74 Aligned_cols=37 Identities=5% Similarity=0.083 Sum_probs=32.2
Q ss_pred cCCCCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEE
Q 020390 225 EGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 265 (327)
Q Consensus 225 ~~~v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~ 265 (327)
.++++||+++|| -+|.+-..+++.|.+.|+++|.++-
T Consensus 169 ~~~l~~k~vLvI----GaGem~~l~a~~L~~~g~~~i~v~n 205 (338)
T PRK00676 169 RQKSKKASLLFI----GYSEINRKVAYYLQRQGYSRITFCS 205 (338)
T ss_pred hCCccCCEEEEE----cccHHHHHHHHHHHHcCCCEEEEEc
Confidence 367999999986 5899999999999999999887764
No 172
>PLN02962 hydroxyacylglutathione hydrolase
Probab=26.15 E-value=2.3e+02 Score=26.20 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=29.6
Q ss_pred CCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCC
Q 020390 228 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFP 271 (327)
Q Consensus 228 v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~ 271 (327)
..++.++|||..- .......+.+++.|.+-..+++||+=+.
T Consensus 33 ~~~~~avlIDP~~---~~~~~~l~~l~~~g~~i~~Il~TH~H~D 73 (251)
T PLN02962 33 HPDKPALLIDPVD---KTVDRDLSLVKELGLKLIYAMNTHVHAD 73 (251)
T ss_pred CCCCEEEEECCCC---CcHHHHHHHHHHCCCeeEEEEcCCCCch
Confidence 3467899999632 2334556788888988889999998543
No 173
>COG1751 Uncharacterized conserved protein [Function unknown]
Probab=25.91 E-value=1.1e+02 Score=26.67 Aligned_cols=75 Identities=19% Similarity=0.177 Sum_probs=0.0
Q ss_pred cChhhHHHHHHHHHHcCCCeEEEEEEeecCCC--------ChHHHHhcccCCCccCCcCEEEEecCCCCchhhhcCCCCe
Q 020390 241 QSGGTLIECQKVLAAHGAAKVSAYVTHGVFPK--------GSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPF 312 (327)
Q Consensus 241 ~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~--------~a~~~l~~~~~~~~~~~~~~iv~Tnti~~~~~~~~~~~k~ 312 (327)
+||.|..++.+.+... -+|.+++-|.-|.+ +..+.|.+.| ..+.|-|+..+--.-.-..|+
T Consensus 36 ~tG~tA~k~lemveg~--lkvVvVthh~Gf~e~g~~e~~~E~~~~L~erG---------a~v~~~sHalSg~eRsis~kf 104 (186)
T COG1751 36 STGYTALKALEMVEGD--LKVVVVTHHAGFEEKGTQEMDEEVRKELKERG---------AKVLTQSHALSGVERSISRKF 104 (186)
T ss_pred cccHHHHHHHHhcccC--ceEEEEEeecccccCCceecCHHHHHHHHHcC---------ceeeeehhhhhcchhhhhhhc
Q ss_pred EEEechHHHHHhhc
Q 020390 313 EVLSLAGSIADALQ 326 (327)
Q Consensus 313 ~v~~va~~la~~i~ 326 (327)
.=++=-+.||+.+|
T Consensus 105 GG~~p~eiiAetLR 118 (186)
T COG1751 105 GGYSPLEIIAETLR 118 (186)
T ss_pred CCcchHHHHHHHHH
No 174
>cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1. A subgroup of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subgroups; relatively litt
Probab=25.82 E-value=1.4e+02 Score=25.09 Aligned_cols=41 Identities=17% Similarity=0.028 Sum_probs=30.6
Q ss_pred cCCCCCCeEEEEeccccCh--------hhHHHHHHHHHHcCCCeEEEEE
Q 020390 225 EGNPAGCHVVIVDDLVQSG--------GTLIECQKVLAAHGAAKVSAYV 265 (327)
Q Consensus 225 ~~~v~gk~viivDDii~TG--------~Tl~~~~~~L~~~GA~~v~~~~ 265 (327)
..|++||-|++.....+.. ++...=.+.+.++||.-|.++.
T Consensus 45 ~iDVkGKIVlv~~g~p~~~~~~~~~~~~~~~~K~~~A~~~GA~aVIi~~ 93 (137)
T cd04820 45 GLDVKGKIVVVLSGGPAGIPSEEGAHAHSSNEKARYAAKAGAIGMITLT 93 (137)
T ss_pred CCCCCCeEEEEEcCCCCccccccccccccHHHHHHHHHHCCCeEEEEEe
Confidence 3589999998887765421 3566677888899999887775
No 175
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=25.66 E-value=1.3e+02 Score=22.82 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=25.6
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~ 264 (327)
+++.+++++ .+|.+...++..|+..|...|+.+
T Consensus 64 ~~~~vv~~c---~~g~~s~~~a~~L~~~G~~~v~~l 96 (105)
T cd01525 64 KGKIIVIVS---HSHKHAALFAAFLVKCGVPRVCIL 96 (105)
T ss_pred cCCeEEEEe---CCCccHHHHHHHHHHcCCCCEEEE
Confidence 367777765 577777888889999999888643
No 176
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=25.63 E-value=1.3e+02 Score=22.30 Aligned_cols=31 Identities=16% Similarity=0.196 Sum_probs=23.7
Q ss_pred CCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEE
Q 020390 230 GCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 264 (327)
Q Consensus 230 gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~ 264 (327)
+++++++. ++|.....++..|++.|. .|..+
T Consensus 51 ~~~vvl~c---~~g~~a~~~a~~L~~~G~-~v~~l 81 (90)
T cd01524 51 DKEIIVYC---AVGLRGYIAARILTQNGF-KVKNL 81 (90)
T ss_pred CCcEEEEc---CCChhHHHHHHHHHHCCC-CEEEe
Confidence 56788874 468888889999999998 65443
No 177
>cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1. A subfamily of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subfamilies, relatively little is known a
Probab=25.11 E-value=1.6e+02 Score=24.95 Aligned_cols=41 Identities=29% Similarity=0.184 Sum_probs=29.8
Q ss_pred cCCCCCCeEEEEecccc-------Chh-------hHHHHHHHHHHcCCCeEEEEE
Q 020390 225 EGNPAGCHVVIVDDLVQ-------SGG-------TLIECQKVLAAHGAAKVSAYV 265 (327)
Q Consensus 225 ~~~v~gk~viivDDii~-------TG~-------Tl~~~~~~L~~~GA~~v~~~~ 265 (327)
..|++||-|++..+-.+ +|+ ++..=.+..+++||.-|.++.
T Consensus 43 g~DVkGKIVlv~~g~P~~~~~~~~~~~~~~~~~~~~~~K~~~A~~~GA~gvIii~ 97 (142)
T cd04814 43 GLDVKGKVVVVLRNDPQGEPGAGDFGGKAMTYYGRWTYKYEEAARHGAAGVLIVH 97 (142)
T ss_pred CCCCCCcEEEEEcCCCCcccccccccccccccccCHHHHHHHHHHCCCcEEEEEe
Confidence 34899999988766441 122 566777888899999887775
No 178
>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms]
Probab=24.80 E-value=2.5e+02 Score=21.60 Aligned_cols=45 Identities=20% Similarity=0.179 Sum_probs=26.9
Q ss_pred CCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCC--ChHHHHhcc
Q 020390 228 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPK--GSWERFTLK 281 (327)
Q Consensus 228 v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~--~a~~~l~~~ 281 (327)
..+.++++||| .-.......+.|...| +.++..-++ .+.+.+.+.
T Consensus 3 ~~~~~vLivdD---~~~~~~~~~~~l~~~g------~~v~~a~~g~~~al~~~~~~ 49 (130)
T COG0784 3 LSGLRVLVVDD---EPVNRRLLKRLLEDLG------YEVVEAADGEEEALELLREL 49 (130)
T ss_pred CCCcEEEEEcC---CHHHHHHHHHHHHHcC------CeEEEeCChHHHHHHHHHhC
Confidence 35779999999 3344445556777777 222223344 466666654
No 179
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=24.64 E-value=4.9e+02 Score=26.60 Aligned_cols=89 Identities=10% Similarity=-0.009 Sum_probs=53.3
Q ss_pred CCEEEEecCCcHHHHHHHHHHcCCceeeeeeEe------ecCCC-----ceeEE--Ee-eCCCCCCceEEEEEecCCchh
Q 020390 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWR------NFADG-----WPNLY--IN-SAHDIRGQHVAFLASFSSPGV 80 (327)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~------~F~dG-----E~~v~--v~-~~~~vrg~dV~iiqs~~~~~~ 80 (327)
.++.+---.+...+|..+|+.+| +++...-++ .|..- +.+++ +. +.+.++|+.|++|...-.-..
T Consensus 284 ~D~VvpVP~s~~~~A~gla~~~g-ip~~~~lik~~~~~Rt~i~~~~~~R~~nv~~~f~~~~~~v~gk~VlLVDDsittGt 362 (475)
T PRK07631 284 ADVVTGVPDSSISAAIGYAEATG-IPYELGLIKNRYVGRTFIQPSQALREQGVKMKLSPVRGVVEGKRVVMVDDSIVRGT 362 (475)
T ss_pred CcEEEEechhHHHHHHHHHHHHC-CCcccceEEEecCCCCCcCCCHHHHHHHHhhhhhhcccccCCceEEEEeeeeccHH
Confidence 34444222345578999999996 877542222 23322 11111 11 245688999999977544434
Q ss_pred HHHHHHHHHHhhhcCccceeEeecCC
Q 020390 81 IFEQISVIYALPRLFVASFTLVLPFF 106 (327)
Q Consensus 81 l~elll~~~al~~~~a~~i~~viPY~ 106 (327)
.+. -++.+|+++||++|.+.+.--
T Consensus 363 Tl~--~~~~~L~~aGA~eV~v~~~sP 386 (475)
T PRK07631 363 TSR--RIVTMLREAGATEVHVRISSP 386 (475)
T ss_pred HHH--HHHHHHHHcCCCEEEEEEeCC
Confidence 333 467899999999998876433
No 180
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.
Probab=24.59 E-value=89 Score=23.60 Aligned_cols=32 Identities=22% Similarity=0.061 Sum_probs=25.6
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 263 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~ 263 (327)
+++.+++++ .+|.....++..|++.|...|+.
T Consensus 60 ~~~~ivv~c---~~g~~s~~~~~~l~~~G~~~v~~ 91 (103)
T cd01447 60 EDKPFVFYC---ASGWRSALAGKTLQDMGLKPVYN 91 (103)
T ss_pred CCCeEEEEc---CCCCcHHHHHHHHHHcChHHhEe
Confidence 467888886 46777788899999999887764
No 181
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=24.32 E-value=1.4e+02 Score=23.06 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=25.2
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCe-EEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAK-VSA 263 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~-v~~ 263 (327)
+++.++++ |.+|..-..++..|++.|.+. |+.
T Consensus 65 ~~~~ivv~---C~~G~rs~~a~~~L~~~G~~~~v~~ 97 (109)
T cd01533 65 PRTPIVVN---CAGRTRSIIGAQSLINAGLPNPVAA 97 (109)
T ss_pred CCCeEEEE---CCCCchHHHHHHHHHHCCCCcceeE
Confidence 46778887 678887788999999999876 544
No 182
>PLN02160 thiosulfate sulfurtransferase
Probab=24.15 E-value=1.2e+02 Score=25.01 Aligned_cols=44 Identities=20% Similarity=0.278 Sum_probs=33.9
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhccc
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKN 282 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~ 282 (327)
++++++++ |.+|.+-..++..|++.|...|+.+ .+++....+.|
T Consensus 80 ~~~~Iivy---C~sG~RS~~Aa~~L~~~G~~~v~~l-------~GG~~~W~~~g 123 (136)
T PLN02160 80 PADDILVG---CQSGARSLKATTELVAAGYKKVRNK-------GGGYLAWVDHS 123 (136)
T ss_pred CCCcEEEE---CCCcHHHHHHHHHHHHcCCCCeeec-------CCcHHHHhhCC
Confidence 46677776 7899999999999999999887654 24566677665
No 183
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=23.42 E-value=3.2e+02 Score=23.78 Aligned_cols=69 Identities=14% Similarity=0.137 Sum_probs=38.2
Q ss_pred cHHHHHHHHHHcCCceeeeeeEeec-CCCce-----------eEEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHHHh
Q 020390 25 CEELARKVAAQSDLITLQSINWRNF-ADGWP-----------NLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYAL 91 (327)
Q Consensus 25 ~~~la~~ia~~l~~~~~~~~~~~~F-~dGE~-----------~v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~al 91 (327)
--.+|..+|..|| +++..+.-.+. |.++. .+++.-..--.|+.|+||..+-.. ..+ .-+.+.+
T Consensus 64 Gi~~a~~vA~~Lg-vp~v~vRK~~kl~~~~~~~~~~~~~~~~~l~~~~~~l~~G~rVlIVDDllaTGgT~---~a~~~Ll 139 (179)
T COG0503 64 GIPLAAAVALELG-VPFVPVRKKGKLPEESVVETYYLEYGSETLELHKDALKPGDRVLIVDDLLATGGTA---LALIELL 139 (179)
T ss_pred cchhHHHHHHHhC-CCEEEEEecCCCCCcceeEEEEEeccceEEEEEhhhCCCCCEEEEEecchhcChHH---HHHHHHH
Confidence 4578999999996 76655443222 22211 122221111158888888876443 222 2356677
Q ss_pred hhcCcc
Q 020390 92 PRLFVA 97 (327)
Q Consensus 92 ~~~~a~ 97 (327)
+++|++
T Consensus 140 ~~~ga~ 145 (179)
T COG0503 140 EQAGAE 145 (179)
T ss_pred HHCCCE
Confidence 788864
No 184
>PRK14093 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional
Probab=23.33 E-value=6.2e+02 Score=25.49 Aligned_cols=107 Identities=10% Similarity=-0.037 Sum_probs=55.6
Q ss_pred HHHHHHHHHcCCceeeeee--Eeec--CCCceeEEEeeCCCCCCceEEEEEe--cCCchhHHHHHHHHHHhhhcCcccee
Q 020390 27 ELARKVAAQSDLITLQSIN--WRNF--ADGWPNLYINSAHDIRGQHVAFLAS--FSSPGVIFEQISVIYALPRLFVASFT 100 (327)
Q Consensus 27 ~la~~ia~~l~~~~~~~~~--~~~F--~dGE~~v~v~~~~~vrg~dV~iiqs--~~~~~~l~elll~~~al~~~~a~~i~ 100 (327)
-.|-.++..+| ++...+. +.+| +.|-.+. +++. .. +..+.+|.. -+.|+.+-..|-.+..+......|++
T Consensus 297 laAia~a~~lG-i~~~~i~~~l~~~~~~~gR~~~-~r~~-~~-~~~~~iIDDsYahnP~s~~aaL~~l~~~~~~~~~r~i 372 (479)
T PRK14093 297 LAVLAAAELAG-ADLALAALALSQVQPAAGRGVR-HTLE-VG-GGEATLIDESYNANPASMAAALGVLGRAPVGPQGRRI 372 (479)
T ss_pred HHHHHHHHHcC-CCHHHHHHHHHhCCCcCCcceE-EEee-cC-CCCEEEEECCCCCCHHHHHHHHHHHHhhhccCCCCEE
Confidence 33555677785 7776544 5666 4442111 1211 11 234566664 34577666655544443211123556
Q ss_pred EeecCC--CCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCCEEEEEeCCc
Q 020390 101 LVLPFF--PTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA 150 (327)
Q Consensus 101 ~viPY~--~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d~vi~vdlHs 150 (327)
+|+.=+ -|+|....+ +.+++.+.. .++|.|+.+..+.
T Consensus 373 ~V~G~m~elg~~~~~~h--------~~~~~~~~~-----~~~d~v~~~G~~~ 411 (479)
T PRK14093 373 AVLGDMLELGPRGPELH--------RGLAEAIRA-----NAIDLVFCCGPLM 411 (479)
T ss_pred EEECChHHcCcHHHHHH--------HHHHHHHHH-----cCCCEEEEEchhH
Confidence 665432 344433221 356777764 2679999998655
No 185
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=23.18 E-value=1.4e+02 Score=25.44 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=30.9
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEEEEEee
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 268 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~~~tH~ 268 (327)
+|+++.+|=| .-++|....+..+...|.. +..++-.+
T Consensus 1 ~gl~i~~vGD--~~~rv~~Sl~~~~~~~g~~-~~~~~P~~ 37 (158)
T PF00185_consen 1 KGLKIAYVGD--GHNRVAHSLIELLAKFGME-VVLIAPEG 37 (158)
T ss_dssp TTEEEEEESS--TTSHHHHHHHHHHHHTTSE-EEEESSGG
T ss_pred CCCEEEEECC--CCChHHHHHHHHHHHcCCE-EEEECCCc
Confidence 5889999998 5689999999999999988 77776555
No 186
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=22.94 E-value=1.8e+02 Score=22.84 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=25.7
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 263 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~ 263 (327)
+++.++++ |.+|.....++..|++.|...|+.
T Consensus 57 ~~~~vvly---C~~G~rS~~aa~~L~~~G~~~v~~ 88 (101)
T TIGR02981 57 KNDTVKLY---CNAGRQSGMAKDILLDMGYTHAEN 88 (101)
T ss_pred CCCeEEEE---eCCCHHHHHHHHHHHHcCCCeEEe
Confidence 45567676 678999999999999999988764
No 187
>TIGR01573 cas2 CRISPR-associated endoribonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. It is an endoribonuclease, capable of cleaving single-stranded RNA. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead.
Probab=22.91 E-value=1.1e+02 Score=23.80 Aligned_cols=50 Identities=20% Similarity=0.301 Sum_probs=37.1
Q ss_pred eEEEEeccccCh--hhHHHHHHHHHHcCCCeEEEEEEeecCCCChHH-HHhcc
Q 020390 232 HVVIVDDLVQSG--GTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWE-RFTLK 281 (327)
Q Consensus 232 ~viivDDii~TG--~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~-~l~~~ 281 (327)
.++|+=||-+.+ ....+.++.|++.|..++.--+..|.+++.... .+.+.
T Consensus 2 ~~lV~YDI~~~~~~k~r~kv~k~L~~~G~~rvQ~SVf~~~~~~~~~~~~l~~~ 54 (95)
T TIGR01573 2 LVLVVYDIPTDGERKRRRKLRKLLEKYGLQRVQYSVFEGILEPNQLARKLIER 54 (95)
T ss_pred EEEEEEECCCCchHHHHHHHHHHHHHcchhheeccEEEEEcCHHHHHHHHHHH
Confidence 368888998776 678899999999996766666666677766555 55553
No 188
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=22.91 E-value=85 Score=30.11 Aligned_cols=50 Identities=22% Similarity=0.296 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCeE---EEEEEeecCCCChHHHHhcccCCCccCCcC----EEEEecCCCCch
Q 020390 246 LIECQKVLAAHGAAKV---SAYVTHGVFPKGSWERFTLKNGENMENAFA----NFWITDSCPLTV 303 (327)
Q Consensus 246 l~~~~~~L~~~GA~~v---~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~----~iv~Tnti~~~~ 303 (327)
+.++-+.+.+.|+..+ ..+.||+ +|....+-|..+. -. +|+||.|-|.-+
T Consensus 102 ~~~a~~~ia~~~a~~i~dg~~IlTh~-~S~~v~~~l~~A~-------~~~k~~~V~VtESRP~~e 158 (301)
T COG1184 102 VEKAKERIAEIGAERIHDGDVILTHS-FSKTVLEVLKTAA-------DRGKRFKVIVTESRPRGE 158 (301)
T ss_pred HHHHHHHHHHHHHhhccCCCEEEEec-CcHHHHHHHHHhh-------hcCCceEEEEEcCCCcch
No 189
>PRK08105 flavodoxin; Provisional
Probab=22.80 E-value=2.9e+02 Score=23.15 Aligned_cols=64 Identities=13% Similarity=0.032 Sum_probs=34.2
Q ss_pred CEEEEecCC---cHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecC----CchhHHHHHH
Q 020390 16 QVHLFYCVE---CEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFS----SPGVIFEQIS 86 (327)
Q Consensus 16 ~~~i~~g~~---~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~----~~~~l~elll 86 (327)
++.||.||. .+.+|++|++.|. -.-.++.+..-+|-+ .+ +......|+++.|+. +|++..+.+.
T Consensus 3 ~i~I~YgS~tGnte~~A~~l~~~l~-~~g~~~~~~~~~~~~---~~---~~~~~~~vi~~~sT~G~Ge~p~~~~~f~~ 73 (149)
T PRK08105 3 KVGIFVGTVYGNALLVAEEAEAILT-AQGHEVTLFEDPELS---DW---QPYQDELVLVVTSTTGQGDLPDSIVPLFQ 73 (149)
T ss_pred eEEEEEEcCchHHHHHHHHHHHHHH-hCCCceEEechhhCC---ch---hcccCCeEEEEECCCCCCCCChhHHHHHH
Confidence 577887765 5688888888773 111122222222211 01 112235677888886 4677666554
No 190
>PF14502 HTH_41: Helix-turn-helix domain
Probab=22.18 E-value=89 Score=21.57 Aligned_cols=22 Identities=36% Similarity=0.477 Sum_probs=17.9
Q ss_pred cChhhHHHHHHHHHHcCCCeEE
Q 020390 241 QSGGTLIECQKVLAAHGAAKVS 262 (327)
Q Consensus 241 ~TG~Tl~~~~~~L~~~GA~~v~ 262 (327)
-+=+|++.|.+.|++.||-.+.
T Consensus 18 vs~GtiQ~Alk~Le~~gaI~Le 39 (48)
T PF14502_consen 18 VSRGTIQNALKFLEENGAIKLE 39 (48)
T ss_pred cchhHHHHHHHHHHHCCcEEee
Confidence 3568999999999999986543
No 191
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=22.08 E-value=6.8e+02 Score=25.83 Aligned_cols=79 Identities=15% Similarity=0.103 Sum_probs=50.1
Q ss_pred CcHHHHHHHHHHcCCceeeeeeEee------c--CCC---ceeEEEe---eCCCCCCceEEEEEecCCchhHHHHHHHHH
Q 020390 24 ECEELARKVAAQSDLITLQSINWRN------F--ADG---WPNLYIN---SAHDIRGQHVAFLASFSSPGVIFEQISVIY 89 (327)
Q Consensus 24 ~~~~la~~ia~~l~~~~~~~~~~~~------F--~dG---E~~v~v~---~~~~vrg~dV~iiqs~~~~~~l~elll~~~ 89 (327)
+....|..+|+.+| +++...-++. | |.. +..++++ +.+.+.|+.|++|.....-...+. -++.
T Consensus 312 sG~~~A~g~a~~~g-ip~~~~l~kn~~~grtfi~~~q~~r~~~~r~k~~~~~~~~~gk~vllVDD~ittG~T~~--~~~~ 388 (510)
T PRK07847 312 SGTPAAVGYAQESG-IPFGQGLVKNAYVGRTFIQPSQTIRQLGIRLKLNPLREVIRGKRLVVVDDSIVRGNTQR--ALVR 388 (510)
T ss_pred chHHHHHHHHHHhC-CChhhceEeecccccCccCcchhhhhhceeeecCccccccCCCEEEEEecccCchHHHH--HHHH
Confidence 34678999999996 8775432221 1 111 1123333 244578999999987654444433 5788
Q ss_pred HhhhcCccceeEeecC
Q 020390 90 ALPRLFVASFTLVLPF 105 (327)
Q Consensus 90 al~~~~a~~i~~viPY 105 (327)
.|+++|+++|.+-+--
T Consensus 389 ~L~~~ga~~v~~ri~s 404 (510)
T PRK07847 389 MLREAGAAEVHVRISS 404 (510)
T ss_pred HHHHcCCCEEEEEECC
Confidence 9999999998886543
No 192
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=21.97 E-value=1.4e+02 Score=25.45 Aligned_cols=32 Identities=16% Similarity=0.085 Sum_probs=24.7
Q ss_pred ceEEEEEecCCchhHHHHHH-HHHHhhhcCcccee
Q 020390 67 QHVAFLASFSSPGVIFEQIS-VIYALPRLFVASFT 100 (327)
Q Consensus 67 ~dV~iiqs~~~~~~l~elll-~~~al~~~~a~~i~ 100 (327)
-||+.++|++. ..+++.- ++++||+.|...|.
T Consensus 64 v~vIgvSsl~g--~h~~l~~~lve~lre~G~~~i~ 96 (143)
T COG2185 64 VDVIGVSSLDG--GHLTLVPGLVEALREAGVEDIL 96 (143)
T ss_pred CCEEEEEeccc--hHHHHHHHHHHHHHHhCCcceE
Confidence 47888988863 3444444 89999999999998
No 193
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=21.85 E-value=7e+02 Score=25.44 Aligned_cols=78 Identities=10% Similarity=0.089 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCceeee------eeEeecC--CCc---eeEEEe---eCCCCCCceEEEEEecCCchhHHHHHHHHHHh
Q 020390 26 EELARKVAAQSDLITLQS------INWRNFA--DGW---PNLYIN---SAHDIRGQHVAFLASFSSPGVIFEQISVIYAL 91 (327)
Q Consensus 26 ~~la~~ia~~l~~~~~~~------~~~~~F~--dGE---~~v~v~---~~~~vrg~dV~iiqs~~~~~~l~elll~~~al 91 (327)
...|..+|+.+| +++.. ..-++|- ..+ ..+++. +.+.+.|+.|+||.....-..-+. -++++|
T Consensus 303 ~~~A~g~a~~~g-ip~~~~L~r~r~~~r~fi~~~q~~R~~~~~~kl~~~~~~i~gk~VlLVDDsittGtTl~--~~~~~L 379 (474)
T PRK06388 303 RSQAIGFSMASG-IPYTEGLIKNRYSERTFIMPTQSDRKAAIKLKLNPIREVISGKRIVLVDDSIVRGNTMR--FIVKIM 379 (474)
T ss_pred HHHHHHHHHHhC-CCchhheEEecccCCcccCCchhhhhhceeEEeccccccccCceEEEEeCeECcHHHHH--HHHHHH
Confidence 356899999996 87743 1122222 211 113332 224567899999987654444433 577899
Q ss_pred hhcCccceeEeecCC
Q 020390 92 PRLFVASFTLVLPFF 106 (327)
Q Consensus 92 ~~~~a~~i~~viPY~ 106 (327)
+++||+.|.+.+---
T Consensus 380 ~~aGak~V~~ri~sP 394 (474)
T PRK06388 380 RKYGAKEVHVRIGSP 394 (474)
T ss_pred HHcCCCEEEEEeCCC
Confidence 999999988865433
No 194
>COG4373 Mu-like prophage FluMu protein gp28 [General function prediction only]
Probab=21.85 E-value=3.6e+02 Score=26.71 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=59.4
Q ss_pred hhcCCCCEEEEecCCcHHHHHHHHHH-------c-------CC-------ceeeeeeEeecCCCceeEEEe----eCCCC
Q 020390 10 KKSQKKQVHLFYCVECEELARKVAAQ-------S-------DL-------ITLQSINWRNFADGWPNLYIN----SAHDI 64 (327)
Q Consensus 10 ~~~~~~~~~i~~g~~~~~la~~ia~~-------l-------~~-------~~~~~~~~~~F~dGE~~v~v~----~~~~v 64 (327)
|-+.++++-+|..+|+.++|.+--+. + |. -.-....+-.||+| .+|+ -+.+.
T Consensus 55 k~k~eGG~dVfy~gs~~emArEyI~acamwar~fN~~A~d~~E~~f~d~dk~~Iltyvi~FasG---fkI~ALSSnPknl 131 (509)
T COG4373 55 KPKREGGMDVFYSGSDLEMAREYIRACAMWARIFNVVATDLGEVVFEDSDKSAILTYVIAFASG---FKITALSSNPKNL 131 (509)
T ss_pred cccccCCceeEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhhHhheeecCC---ceEeeccCCCccc
Confidence 33456888888888888888764222 2 10 01223456789999 5665 35678
Q ss_pred CCc-eEEEEEecCCchhHHHHHHHHHHhhhcCccceeEeecCCC
Q 020390 65 RGQ-HVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFP 107 (327)
Q Consensus 65 rg~-dV~iiqs~~~~~~l~elll~~~al~~~~a~~i~~viPY~~ 107 (327)
||+ .+++|.-..-.+++=|||-..-++.-.|+ +|.++-..-+
T Consensus 132 Rg~qG~VviDEaAFHE~ldEllkAA~altmWGa-~vRviStHNG 174 (509)
T COG4373 132 RGKQGKVVIDEAAFHEDLDELLKAAAALTMWGA-PVRVISTHNG 174 (509)
T ss_pred ccCCCcEEeehhhhhhhHHHHHHHHHHHhhcCC-ceEEEeccCC
Confidence 884 35555554445778888888878777776 5666655544
No 195
>PRK05320 rhodanese superfamily protein; Provisional
Probab=21.72 E-value=1.5e+02 Score=27.47 Aligned_cols=33 Identities=21% Similarity=0.127 Sum_probs=29.2
Q ss_pred CCCCeEEEEeccccChhhHHHHHHHHHHcCCCeEEE
Q 020390 228 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 263 (327)
Q Consensus 228 v~gk~viivDDii~TG~Tl~~~~~~L~~~GA~~v~~ 263 (327)
.++|.++++ |++|..-..++..|++.|-+.|+-
T Consensus 173 ~kdk~Ivvy---C~~G~Rs~~Aa~~L~~~Gf~~V~~ 205 (257)
T PRK05320 173 LAGKTVVSF---CTGGIRCEKAAIHMQEVGIDNVYQ 205 (257)
T ss_pred cCCCeEEEE---CCCCHHHHHHHHHHHHcCCcceEE
Confidence 478898887 899999999999999999998863
No 196
>PF05124 S_layer_C: S-layer like family, C-terminal region ; InterPro: IPR022651 This entry represents the C-terminal domain of S-layer proteins. Some local similarity can be found to other S-layer protein families.
Probab=21.66 E-value=2.8e+02 Score=25.36 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=36.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEe-eCCCCCCceEEEEEecCC
Q 020390 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYIN-SAHDIRGQHVAFLASFSS 77 (327)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~-~~~~vrg~dV~iiqs~~~ 77 (327)
++++.++.|+-+..+++++...+. ++. + ||..-.|+ +.....|.+|++++...+
T Consensus 154 ~~nlILVGGPvaN~~t~~l~~~~~-i~i--------~-~~~~gvi~~~~~~~n~~~VivvAG~Dr 208 (222)
T PF05124_consen 154 DKNLILVGGPVANKLTKELNDEFP-IKI--------P-GENPGVIQVIKNPFNGYDVIVVAGSDR 208 (222)
T ss_pred CCCEEEECCchHHHHHHHHHhcCc-ccc--------c-CCCceEEEEEecCCCCCEEEEEeCCCH
Confidence 578999999988899999998884 644 3 32222233 223344899999887543
No 197
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=21.56 E-value=1.3e+02 Score=24.69 Aligned_cols=56 Identities=20% Similarity=0.274 Sum_probs=35.3
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCCCC
Q 020390 244 GTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 301 (327)
Q Consensus 244 ~Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti~~ 301 (327)
-|+.++.+.|.+.|.++|.+.-+| ++.+.-.+.|.+.- +.+.....+|.+++-+-.
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~Pl~-l~~G~e~~di~~~v-~~~~~~~~~i~~g~pLl~ 111 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQSLH-IIPGEEYEKLKREV-DAFKKGFKKIKLGRPLLY 111 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEeCe-eECcHHHHHHHHHH-HHHhCCCceEEEccCCCC
Confidence 478899999999999999999887 55554444444320 000001356777665544
No 198
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily. This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.
Probab=21.51 E-value=1.4e+02 Score=23.78 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=26.4
Q ss_pred CCCeEEEEeccccChhhHHHHHHHHHHcCC-CeEEEE
Q 020390 229 AGCHVVIVDDLVQSGGTLIECQKVLAAHGA-AKVSAY 264 (327)
Q Consensus 229 ~gk~viivDDii~TG~Tl~~~~~~L~~~GA-~~v~~~ 264 (327)
+++.++++ |.+|.....++..|++.|- ..|+.+
T Consensus 71 ~~~~ivv~---C~~G~rs~~aa~~L~~~G~~~~v~~l 104 (122)
T cd01526 71 KDSPIYVV---CRRGNDSQTAVRKLKELGLERFVRDI 104 (122)
T ss_pred CCCcEEEE---CCCCCcHHHHHHHHHHcCCccceeee
Confidence 56788887 4688888889999999999 567654
No 199
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ. This clade of sequences is highly similar to the HisF protein, but generally represents the second HisF homolog in the genome where the other is an authentic HisF observed in the context of a complete histidine biosynthesis operon. The similarity between these WbuZ sequences and true HisFs is such that often the closest match by BLAST of a WbuZ is a HisF. Only by making a multiple sequence alignment is the homology relationship among the WbuZ sequences made apparent. WbuZ genes are invariably observed in the presence of a homolog of the HisH protein (designated WbuY) and a proposed N-acetyl sugar amidotransferase designated in WbuX in E. coli, IfnA in P. aeriginosa and PseA in C. jejuni. Similarly, this trio of genes is invariably found in the context of saccharide biosynthesis loci. It has been shown that the WbuYZ homologs are not essential components of the activity expressed by WbuX, leading to the proposal that these to pr
Probab=21.48 E-value=5.8e+02 Score=22.68 Aligned_cols=69 Identities=20% Similarity=0.173 Sum_probs=38.9
Q ss_pred cHHHHHHHHhcCCCCCCCCCEEEEEeCCcccc-ccccCCcccccccccHHHHHHHHhcCCCCCCcEEEecCCChhHhHHh
Q 020390 122 TAFTMARILSNIPTSRGGPTSLVIYDIHALQE-RFYFSDHVLPLFETGIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHK 200 (327)
Q Consensus 122 sak~ia~lL~~~~~~~~g~d~vi~vdlHs~~~-~gffn~~v~~l~~~~~~~la~~l~~~~~~~~~viV~pd~G~~~ra~~ 200 (327)
..-.+|+.++. .|++.++.+|+..... .+. | .+.+. .+.+. .+.++.++-+......+..
T Consensus 31 dp~~~a~~~~~-----~g~~~i~i~dl~~~~~~~~~-n----------~~~~~-~i~~~--~~~pv~~~ggi~~~~d~~~ 91 (232)
T TIGR03572 31 DPVNAARIYNA-----KGADELIVLDIDASKRGREP-L----------FELIS-NLAEE--CFMPLTVGGGIRSLEDAKK 91 (232)
T ss_pred CHHHHHHHHHH-----cCCCEEEEEeCCCcccCCCC-C----------HHHHH-HHHHh--CCCCEEEECCCCCHHHHHH
Confidence 44457788875 3889999999988532 232 1 22333 33332 2446777655556666555
Q ss_pred hhc-CCCeEE
Q 020390 201 MLD-HFPTVV 209 (327)
Q Consensus 201 ~a~-~~~~~~ 209 (327)
+.. +.+.+.
T Consensus 92 ~~~~G~~~vi 101 (232)
T TIGR03572 92 LLSLGADKVS 101 (232)
T ss_pred HHHcCCCEEE
Confidence 432 444433
No 200
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=21.12 E-value=4.2e+02 Score=20.90 Aligned_cols=77 Identities=9% Similarity=-0.085 Sum_probs=40.2
Q ss_pred EEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCchhHHHHHHHHHHhhhcCc
Q 020390 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFV 96 (327)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~~a 96 (327)
+.+++..++...|+....++. . .........+|.+ . +...+..|++|+-|.+.. --|++-.++.+++.|+
T Consensus 2 I~i~G~G~S~~~a~~~~~~l~-~-~~~~~~~~~~~~~--~----~~~~~~~dl~I~iS~SG~--t~e~i~~~~~a~~~g~ 71 (119)
T cd05017 2 IVILGMGGSGIGGDLLESLLL-D-EAKIPVYVVKDYT--L----PAFVDRKTLVIAVSYSGN--TEETLSAVEQAKERGA 71 (119)
T ss_pred EEEEEcCHHHHHHHHHHHHHH-h-ccCCCEEEecCcc--C----cCCCCCCCEEEEEECCCC--CHHHHHHHHHHHHCCC
Confidence 344444445555555555552 2 1123333334432 1 224556789999887643 2334456667788887
Q ss_pred cceeEeec
Q 020390 97 ASFTLVLP 104 (327)
Q Consensus 97 ~~i~~viP 104 (327)
++.++..
T Consensus 72 -~iI~IT~ 78 (119)
T cd05017 72 -KIVAITS 78 (119)
T ss_pred -EEEEEeC
Confidence 4445543
No 201
>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]
Probab=21.07 E-value=2.3e+02 Score=27.22 Aligned_cols=93 Identities=9% Similarity=0.086 Sum_probs=53.3
Q ss_pred CCCCEEEEec-CCcHHHHHHHHHHcCCceeeeeeE-eecCCCceeEEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHH
Q 020390 13 QKKQVHLFYC-VECEELARKVAAQSDLITLQSINW-RNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIY 89 (327)
Q Consensus 13 ~~~~~~i~~g-~~~~~la~~ia~~l~~~~~~~~~~-~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~ 89 (327)
+..+..+.|- ..-..=+..+|..|. .....+.- ++=.+ |...+..+-.+|+|+.+++|..+.+- ..+. ...+
T Consensus 161 ~~~~~vivSPdaGgaKR~~s~ad~l~-~~fali~ker~k~~-~v~~~m~LVGDv~gkvailVDDm~dt~GTl~---~aa~ 235 (316)
T KOG1448|consen 161 DSENAVIVSPDAGGAKRVTSLADRLN-LDFALIHKERRKAN-EVDIRMVLVGDVKGKVAILVDDMADTCGTLI---KAAD 235 (316)
T ss_pred CccceEEECCCcchhhhhHHHHHhhc-chhhhhhhhhhccc-ccceEEEEEeccCCcEEEEecccccccchHH---HHHH
Confidence 4455555442 222234445566663 43332222 22222 32323334579999999999887542 3333 3566
Q ss_pred HhhhcCccceeEeecCCCCCc
Q 020390 90 ALPRLFVASFTLVLPFFPTGS 110 (327)
Q Consensus 90 al~~~~a~~i~~viPY~~YsR 110 (327)
-|.+.||++|.++.+..=++.
T Consensus 236 ~L~~~GA~kV~a~~THgVfs~ 256 (316)
T KOG1448|consen 236 KLLEHGAKKVYAIVTHGVFSG 256 (316)
T ss_pred HHHhcCCceEEEEEcceeccc
Confidence 777799999999998875554
No 202
>TIGR01697 PNPH-PUNA-XAPA inosine guanosine and xanthosine phosphorylase family. Sequences from Clostridium and Thermotoga fall between these last two clades and are uncharacterized with respect to substrate range and operon.
Probab=20.96 E-value=1.8e+02 Score=26.73 Aligned_cols=65 Identities=20% Similarity=0.150 Sum_probs=42.7
Q ss_pred cCCCCCCeEEEEeccc-c-Chh---hHHHHHHHHHHcCCCeEEEEEEeecCCCChHHHHhcccCCCccCCcCEEEEecCC
Q 020390 225 EGNPAGCHVVIVDDLV-Q-SGG---TLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSC 299 (327)
Q Consensus 225 ~~~v~gk~viivDDii-~-TG~---Tl~~~~~~L~~~GA~~v~~~~tH~~~~~~a~~~l~~~~~~~~~~~~~~iv~Tnti 299 (327)
.|.++|+.|+++--=+ . +|. .+....+.|++.|++.|..+-+.|-+.++ | +-| |-|+.+|.+
T Consensus 45 ~G~~~g~~Vv~~~~gih~~~Gk~~~a~~~~~~~l~~~Gv~~II~~GsaGsl~~~----l-~~G--------DiVI~~~~i 111 (248)
T TIGR01697 45 FGRLGGKPVVCMQGRFHYYEGYDMATVTFPVRVMKLLGVEILVVTNAAGGLNPD----F-KPG--------DLMIIKDHI 111 (248)
T ss_pred EEEECCEEEEEEcCCCcccCCCCHHHHHHHHHHHHHcCCCEEEEecccccCCCC----C-CCC--------CEEEEhhhh
Confidence 4667888888877111 0 011 35455779999999999999888877654 1 223 567777665
Q ss_pred CCc
Q 020390 300 PLT 302 (327)
Q Consensus 300 ~~~ 302 (327)
..+
T Consensus 112 ~~~ 114 (248)
T TIGR01697 112 NLP 114 (248)
T ss_pred hcC
Confidence 443
No 203
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=20.89 E-value=1.8e+02 Score=26.55 Aligned_cols=66 Identities=17% Similarity=0.213 Sum_probs=47.6
Q ss_pred CCCCCceEEEEEecCCchhHHHHHHHHHHhhhcCccceeEeecCCCCCcchhhccCCCcccHHHHHHHHhcCCCCCCCCC
Q 020390 62 HDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPT 141 (327)
Q Consensus 62 ~~vrg~dV~iiqs~~~~~~l~elll~~~al~~~~a~~i~~viPY~~YsRqdr~~~~ge~isak~ia~lL~~~~~~~~g~d 141 (327)
-+.+|+.|+|+...-.-..-| ...+.+||..+++.|.+..|-.|- ..++.|.+ -+|
T Consensus 120 ~~~~g~~VIlVDDGiATGatm--~aAi~~~r~~~~~~IviAVPV~p~----------------~a~~~l~s------~~D 175 (220)
T COG1926 120 PSLKGRTVILVDDGIATGATM--KAAVRALRAKGPKEIVIAVPVAPE----------------DAAAELES------EAD 175 (220)
T ss_pred CCCCCCEEEEEeCCcchhHHH--HHHHHHHHhcCCceEEEEcccCCH----------------HHHHHHHh------hcC
Confidence 467789999988765444443 357889999999999998886653 34566665 368
Q ss_pred EEEEEeCCcc
Q 020390 142 SLVIYDIHAL 151 (327)
Q Consensus 142 ~vi~vdlHs~ 151 (327)
.|+++..-..
T Consensus 176 ~vvc~~~P~~ 185 (220)
T COG1926 176 EVVCLYMPAP 185 (220)
T ss_pred eEEEEcCCcc
Confidence 9999886554
No 204
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=20.76 E-value=94 Score=28.22 Aligned_cols=69 Identities=26% Similarity=0.244 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHhhhcCccceeEeecCCCCCcch--hhccCCC-cccHHHHHHHHhcCCC--CCCCCCEEEEEeCCcc
Q 020390 79 GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFE--RMEEEGD-VATAFTMARILSNIPT--SRGGPTSLVIYDIHAL 151 (327)
Q Consensus 79 ~~l~elll~~~al~~~~a~~i~~viPY~~YsRqd--r~~~~ge-~isak~ia~lL~~~~~--~~~g~d~vi~vdlHs~ 151 (327)
|.++.-.+...++++.+. .+|+|=++|.-.. ..| +|. .++..++.++|..+.. ...|+.+++.+.=|-.
T Consensus 38 D~~ia~~~a~~~a~~~~~---~lv~P~i~yG~s~~h~~f-pGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgG 111 (237)
T PF02633_consen 38 DTLIAEAVAERAAERLGE---ALVLPPIPYGCSPHHMGF-PGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGG 111 (237)
T ss_dssp HHHHHHHHHHHHHHHHTH---EEE---B--BB-GCCTTS-TT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTT
T ss_pred HHHHHHHHHHHHHHHCCc---EEEeCCCccccCcccCCC-CCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHh
Confidence 678888888888888885 7888888776544 333 344 3666666665543210 0359999999999985
No 205
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=20.57 E-value=5.8e+02 Score=22.47 Aligned_cols=71 Identities=4% Similarity=-0.047 Sum_probs=43.0
Q ss_pred CCcHHHHHHHHHHcCCceeeeeeEe-ecC---------------CCceeEEEeeCCCCCCceEEEEEecCCc-hhHHHHH
Q 020390 23 VECEELARKVAAQSDLITLQSINWR-NFA---------------DGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQI 85 (327)
Q Consensus 23 ~~~~~la~~ia~~l~~~~~~~~~~~-~F~---------------dGE~~v~v~~~~~vrg~dV~iiqs~~~~-~~l~ell 85 (327)
...-.||-.+|..|| .++..+.-. +.| .++..++++-..--+|+.|+||...-.- ..+ .
T Consensus 59 a~Gi~la~~lA~~Lg-~p~v~vRK~~k~~~~~~~~~~~~~s~~~~~~~~l~i~~~~l~~G~rVLIVDDvvtTGgT~---~ 134 (191)
T TIGR01744 59 ASGIAPAIMTGLKLG-VPVVFARKKKPLTLTDNLLTASVHSFTKQTTSTVAVSGEFLSDQDRVLIIDDFLANGQAA---H 134 (191)
T ss_pred cccHHHHHHHHHHHC-CCEEEEEeCCCCCCCCcceEEEEEEeecCccEEEEEEHHhCCCcCEEEEEEehhccChHH---H
Confidence 456689999999995 776554432 121 2333334431112379999999886544 233 3
Q ss_pred HHHHHhhhcCcc
Q 020390 86 SVIYALPRLFVA 97 (327)
Q Consensus 86 l~~~al~~~~a~ 97 (327)
-+++.++++|++
T Consensus 135 a~~~ll~~aGa~ 146 (191)
T TIGR01744 135 GLVDIAKQAGAK 146 (191)
T ss_pred HHHHHHHHCCCE
Confidence 466778888875
No 206
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=20.36 E-value=1.6e+02 Score=27.02 Aligned_cols=83 Identities=8% Similarity=-0.045 Sum_probs=50.6
Q ss_pred cCCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHHH
Q 020390 12 SQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYA 90 (327)
Q Consensus 12 ~~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~a 90 (327)
.+.+.+.+|+..++..+|+.++.+|. .++.. +.-..|.. ........+.-.||+|+-|.+.. .++ ..++..
T Consensus 126 ~~a~~I~i~G~G~s~~~A~~~~~~l~--~~g~~-~~~~~d~~--~~~~~~~~~~~~Dv~I~iS~sg~~~~~---~~~~~~ 197 (278)
T PRK11557 126 RSARRIILTGIGASGLVAQNFAWKLM--KIGIN-AVAERDMH--ALLATVQALSPDDLLLAISYSGERREL---NLAADE 197 (278)
T ss_pred hcCCeEEEEecChhHHHHHHHHHHHh--hCCCe-EEEcCChH--HHHHHHHhCCCCCEEEEEcCCCCCHHH---HHHHHH
Confidence 35677899998888899999998883 33332 22234442 11111124555889998887653 334 345668
Q ss_pred hhhcCccceeEee
Q 020390 91 LPRLFVASFTLVL 103 (327)
Q Consensus 91 l~~~~a~~i~~vi 103 (327)
+|+.|++ +.++.
T Consensus 198 ak~~ga~-iI~IT 209 (278)
T PRK11557 198 ALRVGAK-VLAIT 209 (278)
T ss_pred HHHcCCC-EEEEc
Confidence 8888864 44443
No 207
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=20.36 E-value=5.4e+02 Score=21.85 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=47.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHcCCceeeeeeEeecCCCceeEEEeeCCCCCCceEEEEEecCCc-hhHHHHHHHHHHh
Q 020390 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYAL 91 (327)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~l~~~~~~~~~~~~F~dGE~~v~v~~~~~vrg~dV~iiqs~~~~-~~l~elll~~~al 91 (327)
+.+.+.+++..++..+|+.++.+|. .++ ..+.-.+|-. ......+|++|+-|.+.. .++ +-+++.+
T Consensus 32 ~a~~I~i~G~G~S~~~A~~~~~~l~--~~g-~~~~~~~~~~-------~~~~~~~D~vI~iS~sG~t~~~---i~~~~~a 98 (179)
T cd05005 32 NAKRIFVYGAGRSGLVAKAFAMRLM--HLG-LNVYVVGETT-------TPAIGPGDLLIAISGSGETSSV---VNAAEKA 98 (179)
T ss_pred hCCeEEEEecChhHHHHHHHHHHHH--hCC-CeEEEeCCCC-------CCCCCCCCEEEEEcCCCCcHHH---HHHHHHH
Confidence 4577888887788888988888772 121 1222233321 134556899999887654 333 4566778
Q ss_pred hhcCccceeEee
Q 020390 92 PRLFVASFTLVL 103 (327)
Q Consensus 92 ~~~~a~~i~~vi 103 (327)
++.|++ +.++.
T Consensus 99 k~~g~~-iI~IT 109 (179)
T cd05005 99 KKAGAK-VVLIT 109 (179)
T ss_pred HHCCCe-EEEEE
Confidence 888874 44443
Done!