Query 020393
Match_columns 326
No_of_seqs 139 out of 1523
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 09:23:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020393.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020393hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03881 Fructosamin_kin: Fruc 100.0 3E-51 6.4E-56 367.0 21.5 283 35-322 2-287 (288)
2 COG3001 Uncharacterized protei 100.0 6.1E-49 1.3E-53 329.6 24.5 281 35-322 2-285 (286)
3 KOG3021 Predicted kinase [Gene 100.0 4.4E-47 9.6E-52 314.6 21.7 286 39-325 2-312 (313)
4 PRK10593 hypothetical protein; 100.0 1.8E-38 4E-43 287.8 25.6 276 36-324 2-296 (297)
5 PRK05231 homoserine kinase; Pr 100.0 4.1E-31 9E-36 242.8 23.0 246 27-293 1-268 (319)
6 TIGR00938 thrB_alt homoserine 100.0 3.7E-29 8E-34 228.7 24.4 246 27-293 1-268 (307)
7 cd05153 HomoserineK_II Homoser 100.0 4.5E-27 9.7E-32 213.7 23.1 236 36-295 2-258 (296)
8 COG2334 Putative homoserine ki 100.0 4.9E-27 1.1E-31 213.8 21.6 246 25-292 3-276 (331)
9 TIGR02721 ycfN_thiK thiamine k 99.9 2.1E-23 4.5E-28 185.8 23.3 230 55-320 2-255 (256)
10 PRK11768 serine/threonine prot 99.9 9.1E-24 2E-28 194.3 20.7 247 30-299 8-276 (325)
11 cd05155 APH_ChoK_like_1 Unchar 99.9 6.2E-23 1.3E-27 180.5 17.1 215 54-293 2-233 (235)
12 cd05150 APH Aminoglycoside 3'- 99.9 7.9E-22 1.7E-26 174.3 20.6 217 54-297 3-241 (244)
13 PLN02876 acyl-CoA dehydrogenas 99.9 1.3E-21 2.9E-26 200.0 23.6 250 32-299 17-327 (822)
14 PRK09550 mtnK methylthioribose 99.9 3E-21 6.4E-26 179.9 23.2 223 27-263 1-262 (401)
15 PLN02756 S-methyl-5-thioribose 99.9 2.4E-21 5.2E-26 179.6 21.3 223 29-264 5-270 (418)
16 TIGR02172 Fb_sc_TIGR02172 Fibr 99.9 9.6E-22 2.1E-26 171.5 17.0 191 52-279 4-213 (226)
17 cd05152 MPH2' Macrolide 2'-Pho 99.9 5E-21 1.1E-25 171.8 21.5 214 43-281 5-247 (276)
18 TIGR02906 spore_CotS spore coa 99.9 3.9E-21 8.6E-26 175.9 20.7 224 63-298 10-271 (313)
19 PF01636 APH: Phosphotransfera 99.9 6E-22 1.3E-26 173.0 14.0 192 53-264 1-208 (239)
20 COG3173 Predicted aminoglycosi 99.9 1.3E-20 2.8E-25 169.9 19.3 232 33-283 8-273 (321)
21 cd05154 ACAD10_11_like Acyl-Co 99.9 2.2E-20 4.7E-25 162.0 19.1 191 53-263 2-216 (223)
22 PRK06148 hypothetical protein; 99.9 7.6E-20 1.6E-24 189.8 24.1 239 33-294 11-286 (1013)
23 PRK06149 hypothetical protein; 99.9 6.5E-20 1.4E-24 190.1 22.7 238 33-293 17-292 (972)
24 PRK12396 5-methylribose kinase 99.9 1.6E-20 3.4E-25 173.3 16.0 227 24-264 1-267 (409)
25 TIGR02904 spore_ysxE spore coa 99.8 3.9E-20 8.5E-25 169.2 16.9 239 40-293 3-275 (309)
26 cd05157 ETNK_euk Ethanolamine 99.8 5.2E-20 1.1E-24 161.7 16.9 195 53-264 2-212 (235)
27 cd05156 ChoK_euk Choline Kinas 99.8 2.7E-19 5.9E-24 163.1 18.7 196 53-263 2-223 (302)
28 cd05151 ChoK Choline Kinase (C 99.8 2.2E-19 4.8E-24 149.5 16.1 152 53-280 2-168 (170)
29 PLN02236 choline kinase 99.8 5.2E-17 1.1E-21 150.4 23.4 235 35-299 16-304 (344)
30 TIGR01767 MTRK 5-methylthiorib 99.8 3.2E-17 7E-22 149.8 16.8 195 56-264 2-232 (370)
31 PLN02421 phosphotransferase, a 99.8 8.4E-17 1.8E-21 148.3 19.7 200 50-279 15-253 (330)
32 PTZ00296 choline kinase; Provi 99.7 2.4E-15 5.2E-20 143.0 22.9 208 31-263 82-323 (442)
33 PRK10271 thiK thiamine kinase; 99.6 1.1E-14 2.4E-19 121.7 14.1 170 122-320 1-184 (188)
34 COG3231 Aph Aminoglycoside pho 99.6 1.9E-14 4.1E-19 121.3 14.9 210 54-296 23-262 (266)
35 PTZ00384 choline kinase; Provi 99.6 7.8E-14 1.7E-18 130.4 19.8 203 35-263 31-266 (383)
36 PF07914 DUF1679: Protein of u 99.6 9.4E-14 2E-18 131.0 18.2 223 31-264 11-314 (414)
37 TIGR02905 spore_yutH spore coa 99.6 3E-13 6.6E-18 123.8 20.1 222 47-288 8-261 (313)
38 cd05120 APH_ChoK_like Aminogly 99.6 1.1E-13 2.4E-18 111.7 14.1 144 54-263 3-148 (155)
39 PF04655 APH_6_hur: Aminoglyco 99.5 3E-12 6.5E-17 112.8 16.7 214 55-302 8-246 (253)
40 PF02958 EcKinase: Ecdysteroid 99.5 7.2E-13 1.6E-17 120.3 12.3 219 58-278 2-283 (294)
41 PF01633 Choline_kinase: Choli 99.4 1.2E-12 2.5E-17 113.2 7.5 168 73-264 3-185 (211)
42 COG4857 Predicted kinase [Gene 99.3 4.2E-11 9.1E-16 104.3 14.2 204 45-263 26-267 (408)
43 TIGR03724 arch_bud32 Kae1-asso 99.3 9.2E-11 2E-15 100.1 13.3 155 57-283 2-182 (199)
44 COG0510 ycfN Thiamine kinase a 99.3 4.8E-10 1E-14 100.1 17.6 198 53-283 10-218 (269)
45 PRK10359 lipopolysaccharide co 99.2 1.3E-10 2.8E-15 100.8 13.3 102 29-132 12-130 (232)
46 COG3178 Predicted phosphotrans 99.2 2.5E-10 5.3E-15 100.3 12.2 175 90-282 69-270 (351)
47 COG3642 Mn2+-dependent serine/ 99.2 2.2E-10 4.8E-15 94.6 11.2 153 57-281 4-181 (204)
48 PRK14879 serine/threonine prot 99.2 4.2E-10 9.2E-15 96.9 12.3 157 55-280 2-184 (211)
49 KOG4720 Ethanolamine kinase [L 99.1 6.7E-10 1.4E-14 97.5 11.9 200 38-263 68-289 (391)
50 PRK01723 3-deoxy-D-manno-octul 99.1 1.5E-09 3.2E-14 95.6 12.9 71 59-130 42-131 (239)
51 KOG3087 Serine/threonine prote 99.0 6E-09 1.3E-13 86.0 10.8 75 53-131 11-96 (229)
52 TIGR02457 TreS_Cterm trehalose 99.0 3.4E-08 7.3E-13 95.6 16.8 194 54-263 170-428 (528)
53 smart00587 CHK ZnF_C4 abd HLH 98.9 2.6E-09 5.7E-14 91.2 7.5 58 222-279 118-189 (196)
54 PRK09605 bifunctional UGMP fam 98.9 7.1E-09 1.5E-13 102.0 11.0 162 54-289 338-524 (535)
55 TIGR01982 UbiB 2-polyprenylphe 98.9 1.5E-08 3.2E-13 97.0 12.4 100 31-134 94-247 (437)
56 COG0478 RIO-like serine/threon 98.9 8.4E-09 1.8E-13 90.2 9.2 136 55-261 97-260 (304)
57 PRK09902 hypothetical protein; 98.9 6.3E-08 1.4E-12 82.6 13.9 179 36-277 8-214 (216)
58 PRK15123 lipopolysaccharide co 98.8 6.2E-08 1.3E-12 86.5 13.4 65 65-130 38-120 (268)
59 cd05145 RIO1_like RIO kinase f 98.8 1.3E-07 2.9E-12 80.2 12.3 71 55-131 3-103 (190)
60 cd05147 RIO1_euk RIO kinase fa 98.7 1.5E-07 3.3E-12 79.9 10.3 71 56-132 4-104 (190)
61 PF01163 RIO1: RIO1 family; I 98.7 6.9E-08 1.5E-12 81.6 7.3 39 88-132 55-95 (188)
62 cd05146 RIO3_euk RIO kinase fa 98.6 3E-07 6.4E-12 78.1 11.0 36 90-131 75-110 (197)
63 PF06176 WaaY: Lipopolysacchar 98.6 8E-07 1.7E-11 76.2 13.6 102 29-132 12-130 (229)
64 PRK04750 ubiB putative ubiquin 98.6 2.7E-07 5.8E-12 89.9 11.8 99 31-132 96-248 (537)
65 cd05144 RIO2_C RIO kinase fami 98.6 5.6E-07 1.2E-11 76.8 11.8 73 54-132 20-118 (198)
66 COG0661 AarF Predicted unusual 98.6 2.5E-07 5.5E-12 89.4 10.6 97 32-132 103-253 (517)
67 smart00090 RIO RIO-like kinase 98.6 7.5E-07 1.6E-11 78.3 12.3 88 36-132 18-135 (237)
68 PF06293 Kdo: Lipopolysacchari 98.6 3.1E-07 6.7E-12 79.1 9.4 44 86-130 56-102 (206)
69 KOG2686 Choline kinase [Cell w 98.6 6.4E-07 1.4E-11 81.5 11.5 184 51-263 42-253 (366)
70 PRK12274 serine/threonine prot 98.6 7.3E-07 1.6E-11 76.2 11.1 72 54-132 7-85 (218)
71 PRK14705 glycogen branching en 98.5 7.1E-06 1.5E-10 86.3 17.6 249 55-322 150-471 (1224)
72 cd05119 RIO RIO kinase family, 98.4 3.3E-06 7.1E-11 71.1 11.7 71 55-131 3-101 (187)
73 COG1718 RIO1 Serine/threonine 98.4 1.5E-06 3.3E-11 75.4 8.8 136 56-257 55-220 (268)
74 KOG0592 3-phosphoinositide-dep 98.3 4.7E-06 1E-10 78.9 9.7 132 56-250 80-219 (604)
75 COG2187 Uncharacterized protei 98.3 2.7E-06 5.8E-11 74.7 7.4 99 205-305 188-300 (337)
76 cd00180 PKc Catalytic domain o 98.2 5E-06 1.1E-10 69.9 8.1 72 57-132 1-78 (215)
77 KOG1235 Predicted unusual prot 98.2 1.1E-05 2.4E-10 78.1 10.8 99 33-135 140-292 (538)
78 KOG2268 Serine/threonine prote 98.2 1.9E-06 4.2E-11 77.4 5.0 132 57-260 100-259 (465)
79 KOG0605 NDR and related serine 98.2 1.8E-05 3.9E-10 74.9 11.2 135 52-250 144-286 (550)
80 PRK09188 serine/threonine prot 98.1 2.1E-05 4.5E-10 73.3 10.5 72 54-132 23-105 (365)
81 COG3570 StrB Streptomycin 6-ki 98.1 9.2E-05 2E-09 62.4 11.9 165 61-265 24-202 (274)
82 KOG0610 Putative serine/threon 98.0 4.1E-05 8.9E-10 70.5 9.9 138 51-250 79-224 (459)
83 cd05598 STKc_LATS Catalytic do 98.0 5.9E-05 1.3E-09 70.7 10.7 76 53-132 5-88 (376)
84 KOG1187 Serine/threonine prote 97.9 0.00014 3E-09 68.1 12.3 141 56-255 82-228 (361)
85 cd05628 STKc_NDR1 Catalytic do 97.9 6.2E-05 1.3E-09 70.3 10.0 76 53-132 5-88 (363)
86 PLN00034 mitogen-activated pro 97.9 5.2E-05 1.1E-09 70.5 9.4 77 52-132 77-159 (353)
87 cd05614 STKc_MSK2_N N-terminal 97.9 7.9E-05 1.7E-09 68.6 10.5 76 54-132 5-92 (332)
88 cd05627 STKc_NDR2 Catalytic do 97.9 6.7E-05 1.5E-09 70.0 10.1 77 52-132 4-88 (360)
89 cd05102 PTKc_VEGFR3 Catalytic 97.9 0.00013 2.7E-09 67.3 11.6 77 54-132 12-99 (338)
90 cd05596 STKc_ROCK Catalytic do 97.9 3.4E-05 7.5E-10 72.3 7.7 77 52-132 46-130 (370)
91 KOG1989 ARK protein kinase fam 97.9 0.00013 2.8E-09 72.7 11.6 183 50-295 38-251 (738)
92 cd05587 STKc_cPKC Catalytic do 97.8 0.00011 2.4E-09 67.5 10.0 76 54-132 5-88 (324)
93 cd05084 PTKc_Fes Catalytic dom 97.8 0.00021 4.6E-09 62.7 11.2 73 56-132 2-80 (252)
94 cd05104 PTKc_Kit Catalytic dom 97.8 0.00013 2.8E-09 68.5 10.4 76 54-132 40-126 (375)
95 cd05082 PTKc_Csk Catalytic dom 97.8 0.00031 6.6E-09 61.9 12.1 76 54-132 11-87 (256)
96 cd05573 STKc_ROCK_NDR_like Cat 97.8 8.7E-05 1.9E-09 68.7 8.9 75 54-132 6-88 (350)
97 KOG0608 Warts/lats-like serine 97.8 6.1E-05 1.3E-09 73.0 7.7 139 50-252 630-776 (1034)
98 cd05071 PTKc_Src Catalytic dom 97.8 0.0003 6.5E-09 62.3 11.8 75 53-132 10-87 (262)
99 cd05589 STKc_PKN Catalytic dom 97.8 0.00015 3.3E-09 66.5 10.1 78 54-132 4-89 (324)
100 cd05591 STKc_nPKC_epsilon Cata 97.8 0.00013 2.8E-09 66.9 9.5 74 56-132 2-83 (321)
101 cd05600 STKc_Sid2p_Dbf2p Catal 97.8 0.00012 2.7E-09 67.3 9.5 76 53-132 5-88 (333)
102 cd05625 STKc_LATS1 Catalytic d 97.8 9.8E-05 2.1E-09 69.4 8.9 77 52-132 4-88 (382)
103 cd05626 STKc_LATS2 Catalytic d 97.8 0.00028 6E-09 66.4 11.9 77 52-132 4-88 (381)
104 cd05582 STKc_RSK_N N-terminal 97.8 0.00012 2.6E-09 67.0 9.0 74 55-132 2-85 (318)
105 cd05085 PTKc_Fer Catalytic dom 97.8 0.00041 8.8E-09 60.7 12.0 73 56-132 2-79 (250)
106 cd05590 STKc_nPKC_eta Catalyti 97.8 0.00013 2.9E-09 66.8 9.2 74 56-132 2-83 (320)
107 cd05584 STKc_p70S6K Catalytic 97.7 0.00012 2.7E-09 67.1 8.7 74 55-132 2-87 (323)
108 cd05629 STKc_NDR_like_fungal C 97.7 0.00012 2.7E-09 68.7 8.8 75 54-132 6-88 (377)
109 cd05599 STKc_NDR_like Catalyti 97.7 9.8E-05 2.1E-09 68.8 8.0 75 54-132 6-88 (364)
110 cd05069 PTKc_Yes Catalytic dom 97.7 0.00049 1.1E-08 60.8 11.9 74 54-132 11-87 (260)
111 cd05601 STKc_CRIK Catalytic do 97.7 0.00012 2.5E-09 67.4 8.2 75 54-132 6-88 (330)
112 cd05114 PTKc_Tec_Rlk Catalytic 97.7 0.00048 1E-08 60.6 11.8 77 52-132 7-86 (256)
113 cd06644 STKc_STK10_LOK Catalyt 97.7 0.0007 1.5E-08 60.9 13.0 75 54-132 17-96 (292)
114 cd05594 STKc_PKB_alpha Catalyt 97.7 0.00064 1.4E-08 62.4 12.7 73 56-132 2-82 (325)
115 cd05597 STKc_DMPK_like Catalyt 97.7 0.00028 6.1E-09 65.0 10.4 75 54-132 6-88 (331)
116 cd05068 PTKc_Frk_like Catalyti 97.7 0.00055 1.2E-08 60.4 11.8 78 51-132 8-88 (261)
117 cd05574 STKc_phototropin_like 97.7 0.00047 1E-08 62.8 11.7 75 54-132 6-88 (316)
118 cd05072 PTKc_Lyn Catalytic dom 97.7 0.00041 8.8E-09 61.2 10.9 78 51-132 8-88 (261)
119 cd05621 STKc_ROCK2 Catalytic d 97.7 0.00023 5E-09 66.8 9.8 78 51-132 45-130 (370)
120 PTZ00263 protein kinase A cata 97.7 0.00017 3.7E-09 66.4 8.7 77 52-132 21-105 (329)
121 cd05620 STKc_nPKC_delta Cataly 97.7 0.00026 5.6E-09 64.8 9.9 74 56-132 2-83 (316)
122 cd05622 STKc_ROCK1 Catalytic d 97.7 0.00016 3.4E-09 68.0 8.5 78 51-132 45-130 (371)
123 PTZ00426 cAMP-dependent protei 97.7 0.0002 4.4E-09 66.3 9.2 76 53-132 34-118 (340)
124 cd05588 STKc_aPKC Catalytic do 97.7 0.00024 5.1E-09 65.4 9.6 74 56-132 2-83 (329)
125 cd05616 STKc_cPKC_beta Catalyt 97.7 0.00029 6.3E-09 64.6 9.9 76 54-132 5-88 (323)
126 KOG0598 Ribosomal protein S6 k 97.7 0.00024 5.2E-09 64.6 8.8 133 54-250 30-170 (357)
127 cd05049 PTKc_Trk Catalytic dom 97.7 0.0002 4.4E-09 63.8 8.5 74 55-132 11-95 (280)
128 cd06656 STKc_PAK3 Catalytic do 97.7 0.00069 1.5E-08 61.3 12.1 79 50-132 20-103 (297)
129 KOG2270 Serine/threonine prote 97.7 0.00036 7.8E-09 64.2 9.9 139 58-262 153-324 (520)
130 cd05612 STKc_PRKX_like Catalyt 97.7 0.00021 4.6E-09 64.5 8.6 75 54-132 6-88 (291)
131 cd06649 PKc_MEK2 Catalytic dom 97.7 0.00044 9.6E-09 63.7 10.8 78 51-132 7-90 (331)
132 PF00069 Pkinase: Protein kina 97.6 0.00052 1.1E-08 60.2 10.8 75 54-132 4-85 (260)
133 cd05617 STKc_aPKC_zeta Catalyt 97.6 0.00017 3.7E-09 66.3 7.9 74 56-132 2-83 (327)
134 cd05610 STKc_MASTL Catalytic d 97.6 0.00027 5.8E-09 71.6 9.9 76 53-132 8-91 (669)
135 cd05034 PTKc_Src_like Catalyti 97.6 0.00062 1.4E-08 60.0 11.2 75 54-132 11-88 (261)
136 cd06638 STKc_myosinIIIA Cataly 97.6 0.0005 1.1E-08 61.5 10.7 77 54-132 23-107 (286)
137 PTZ00267 NIMA-related protein 97.6 0.00051 1.1E-08 66.8 11.4 75 54-132 72-152 (478)
138 cd05083 PTKc_Chk Catalytic dom 97.6 0.00044 9.4E-09 60.8 10.0 74 54-132 11-85 (254)
139 cd05073 PTKc_Hck Catalytic dom 97.6 0.00071 1.5E-08 59.7 11.4 78 50-132 7-87 (260)
140 cd07871 STKc_PCTAIRE3 Catalyti 97.6 0.00045 9.8E-09 62.2 10.3 73 53-129 9-87 (288)
141 cd05592 STKc_nPKC_theta_delta 97.6 0.00024 5.1E-09 65.1 8.5 74 56-132 2-83 (316)
142 cd05067 PTKc_Lck_Blk Catalytic 97.6 0.00063 1.4E-08 60.0 11.0 74 54-132 11-87 (260)
143 cd05571 STKc_PKB Catalytic dom 97.6 0.00064 1.4E-08 62.4 11.3 73 56-132 2-82 (323)
144 smart00219 TyrKc Tyrosine kina 97.6 0.0012 2.5E-08 57.8 12.6 74 55-132 5-88 (258)
145 cd05615 STKc_cPKC_alpha Cataly 97.6 0.00037 8E-09 64.0 9.7 76 54-132 5-88 (323)
146 cd05624 STKc_MRCK_beta Catalyt 97.6 0.00028 6E-09 65.1 8.7 75 54-132 6-88 (331)
147 cd05041 PTKc_Fes_like Catalyti 97.6 0.00094 2E-08 58.4 11.7 73 56-132 2-79 (251)
148 cd05595 STKc_PKB_beta Catalyti 97.6 0.00062 1.3E-08 62.5 10.9 73 56-132 2-82 (323)
149 cd05613 STKc_MSK1_N N-terminal 97.6 0.00069 1.5E-08 60.8 10.9 76 54-132 5-92 (290)
150 cd05070 PTKc_Fyn_Yrk Catalytic 97.6 0.00044 9.5E-09 61.0 9.4 74 54-132 11-87 (260)
151 cd05593 STKc_PKB_gamma Catalyt 97.6 0.00088 1.9E-08 61.6 11.6 73 56-132 2-82 (328)
152 cd05618 STKc_aPKC_iota Catalyt 97.6 0.0004 8.7E-09 63.9 9.3 74 56-132 2-83 (329)
153 cd07872 STKc_PCTAIRE2 Catalyti 97.6 0.00074 1.6E-08 61.4 10.9 74 52-129 9-88 (309)
154 cd07869 STKc_PFTAIRE1 Catalyti 97.6 0.00065 1.4E-08 61.6 10.4 73 53-129 9-87 (303)
155 cd05602 STKc_SGK1 Catalytic do 97.6 0.00058 1.3E-08 62.7 10.1 27 224-250 115-141 (325)
156 PRK13184 pknD serine/threonine 97.6 0.00063 1.4E-08 70.3 11.1 75 54-132 7-89 (932)
157 cd05585 STKc_YPK1_like Catalyt 97.5 0.00025 5.5E-09 64.7 7.6 72 57-132 1-80 (312)
158 cd06650 PKc_MEK1 Catalytic dom 97.5 0.00087 1.9E-08 61.8 11.2 76 53-132 9-90 (333)
159 KOG0595 Serine/threonine-prote 97.5 0.00016 3.4E-09 66.6 6.0 73 56-132 17-96 (429)
160 cd05059 PTKc_Tec_like Catalyti 97.5 0.00063 1.4E-08 59.9 9.8 76 53-132 8-86 (256)
161 cd05088 PTKc_Tie2 Catalytic do 97.5 0.0013 2.9E-08 59.6 12.0 75 55-132 13-95 (303)
162 cd05096 PTKc_DDR1 Catalytic do 97.5 0.0017 3.7E-08 58.8 12.7 77 52-132 8-106 (304)
163 cd05570 STKc_PKC Catalytic dom 97.5 0.00038 8.2E-09 63.7 8.3 74 56-132 2-83 (318)
164 cd05039 PTKc_Csk_like Catalyti 97.5 0.0014 3E-08 57.6 11.5 75 54-132 11-87 (256)
165 cd08219 STKc_Nek3 Catalytic do 97.5 0.0014 2.9E-08 57.6 11.5 75 54-132 5-85 (255)
166 cd05122 PKc_STE Catalytic doma 97.5 0.0018 4E-08 56.1 12.2 75 54-132 5-84 (253)
167 cd05603 STKc_SGK2 Catalytic do 97.5 0.00088 1.9E-08 61.3 10.6 27 224-250 115-141 (321)
168 cd05580 STKc_PKA Catalytic dom 97.5 0.00088 1.9E-08 60.3 10.4 75 54-132 6-88 (290)
169 cd05079 PTKc_Jak1_rpt2 Catalyt 97.5 0.0012 2.7E-08 59.1 11.3 78 52-132 7-95 (284)
170 cd05623 STKc_MRCK_alpha Cataly 97.5 0.00046 9.9E-09 63.6 8.6 76 53-132 5-88 (332)
171 KOG0192 Tyrosine kinase specif 97.5 0.0015 3.3E-08 61.0 11.9 73 57-132 49-127 (362)
172 cd05038 PTKc_Jak_rpt2 Catalyti 97.5 0.0017 3.6E-08 57.9 11.8 77 53-132 8-95 (284)
173 cd00192 PTKc Catalytic domain 97.5 0.0016 3.6E-08 56.9 11.5 73 56-132 2-83 (262)
174 cd06654 STKc_PAK1 Catalytic do 97.5 0.0031 6.6E-08 57.0 13.6 79 50-132 21-104 (296)
175 cd05604 STKc_SGK3 Catalytic do 97.5 0.00076 1.6E-08 61.9 9.7 27 224-250 115-141 (325)
176 cd05619 STKc_nPKC_theta Cataly 97.5 0.0009 2E-08 61.2 10.0 74 56-132 2-83 (316)
177 cd06614 STKc_PAK Catalytic dom 97.5 0.00037 8E-09 62.5 7.3 77 52-132 22-102 (286)
178 KOG0596 Dual specificity; seri 97.4 0.00037 8E-09 66.6 7.3 73 52-127 364-442 (677)
179 cd05608 STKc_GRK1 Catalytic do 97.4 0.00057 1.2E-08 61.3 8.2 72 57-132 1-80 (280)
180 cd05052 PTKc_Abl Catalytic dom 97.4 0.0023 4.9E-08 56.6 12.0 78 51-132 8-89 (263)
181 PRK10345 hypothetical protein; 97.4 0.0011 2.3E-08 57.2 9.5 75 51-126 4-86 (210)
182 cd05113 PTKc_Btk_Bmx Catalytic 97.4 0.0021 4.5E-08 56.7 11.5 77 52-132 7-86 (256)
183 cd05103 PTKc_VEGFR2 Catalytic 97.4 0.0017 3.8E-08 60.0 11.5 80 51-132 9-99 (343)
184 cd05583 STKc_MSK_N N-terminal 97.4 0.00094 2E-08 59.9 9.4 76 54-132 5-92 (288)
185 cd05586 STKc_Sck1_like Catalyt 97.4 0.00067 1.5E-08 62.3 8.6 27 224-250 115-141 (330)
186 cd08215 STKc_Nek Catalytic dom 97.4 0.0023 4.9E-08 55.9 11.6 75 54-132 5-86 (258)
187 cd05575 STKc_SGK Catalytic dom 97.4 0.0011 2.4E-08 60.8 10.0 27 224-250 115-141 (323)
188 cd08529 STKc_FA2-like Catalyti 97.4 0.0018 3.8E-08 56.8 10.8 74 55-132 6-86 (256)
189 cd08223 STKc_Nek4 Catalytic do 97.4 0.0036 7.8E-08 54.9 12.7 76 54-132 5-87 (257)
190 cd05106 PTKc_CSF-1R Catalytic 97.4 0.0012 2.6E-08 62.0 10.1 80 51-133 40-130 (374)
191 cd06655 STKc_PAK2 Catalytic do 97.4 0.005 1.1E-07 55.6 13.9 79 50-132 20-103 (296)
192 KOG3653 Transforming growth fa 97.4 0.0015 3.2E-08 61.4 10.3 185 57-299 218-414 (534)
193 cd08224 STKc_Nek6_Nek7 Catalyt 97.4 0.0021 4.5E-08 56.7 11.0 75 54-132 7-89 (267)
194 cd06917 STKc_NAK1_like Catalyt 97.4 0.001 2.2E-08 59.2 9.0 78 54-132 6-89 (277)
195 cd08228 STKc_Nek6 Catalytic do 97.4 0.001 2.2E-08 58.8 9.0 75 54-132 7-89 (267)
196 cd06641 STKc_MST3 Catalytic do 97.4 0.0028 6.2E-08 56.5 11.8 76 53-132 8-89 (277)
197 cd06639 STKc_myosinIIIB Cataly 97.4 0.0016 3.5E-08 58.5 10.3 79 52-132 25-111 (291)
198 cd05609 STKc_MAST Catalytic do 97.4 0.0017 3.6E-08 58.9 10.4 75 54-132 6-88 (305)
199 PHA03390 pk1 serine/threonine- 97.3 0.0034 7.3E-08 55.8 12.2 78 50-132 17-96 (267)
200 cd06619 PKc_MKK5 Catalytic dom 97.3 0.0016 3.5E-08 58.1 10.1 76 53-132 5-86 (279)
201 cd07873 STKc_PCTAIRE1 Catalyti 97.3 0.002 4.4E-08 58.2 10.8 74 52-129 9-88 (301)
202 cd05080 PTKc_Tyk2_rpt2 Catalyt 97.3 0.0019 4.1E-08 57.7 10.6 78 52-132 7-95 (283)
203 cd05112 PTKc_Itk Catalytic dom 97.3 0.0036 7.7E-08 54.9 12.1 78 51-132 6-86 (256)
204 cd06615 PKc_MEK Catalytic doma 97.3 0.0019 4E-08 58.8 10.6 77 52-132 4-86 (308)
205 cd07862 STKc_CDK6 Catalytic do 97.3 0.0019 4.2E-08 57.9 10.5 76 54-129 6-93 (290)
206 cd05607 STKc_GRK7 Catalytic do 97.3 0.0015 3.3E-08 58.4 9.7 72 57-132 1-80 (277)
207 cd06640 STKc_MST4 Catalytic do 97.3 0.0025 5.3E-08 56.9 11.1 76 53-132 8-89 (277)
208 cd08217 STKc_Nek2 Catalytic do 97.3 0.0019 4.1E-08 56.6 10.2 75 55-132 6-88 (265)
209 cd05579 STKc_MAST_like Catalyt 97.3 0.0017 3.6E-08 57.0 9.8 71 58-132 2-80 (265)
210 cd05632 STKc_GRK5 Catalytic do 97.3 0.0026 5.6E-08 57.1 11.1 76 53-132 4-87 (285)
211 cd06613 STKc_MAP4K3_like Catal 97.3 0.0063 1.4E-07 53.4 13.5 77 52-132 6-87 (262)
212 cd07832 STKc_CCRK Catalytic do 97.3 0.002 4.4E-08 57.4 10.4 73 55-132 6-85 (286)
213 cd05042 PTKc_Aatyk Catalytic d 97.3 0.0026 5.5E-08 56.4 11.0 73 56-132 2-82 (269)
214 cd05053 PTKc_FGFR Catalytic do 97.3 0.0055 1.2E-07 55.0 13.3 79 51-132 14-103 (293)
215 cd05633 STKc_GRK3 Catalytic do 97.3 0.0014 3E-08 58.8 9.3 75 57-132 2-84 (279)
216 cd05631 STKc_GRK4 Catalytic do 97.3 0.0026 5.5E-08 57.1 11.0 76 53-132 4-87 (285)
217 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.3 0.0019 4.2E-08 57.2 10.1 73 56-132 2-82 (269)
218 KOG0615 Serine/threonine prote 97.3 0.0024 5.2E-08 59.2 10.6 72 55-132 178-263 (475)
219 cd07848 STKc_CDKL5 Catalytic d 97.3 0.0022 4.8E-08 57.4 10.5 73 54-130 6-85 (287)
220 cd06631 STKc_YSK4 Catalytic do 97.3 0.0013 2.7E-08 58.2 8.7 74 55-132 6-89 (265)
221 cd06625 STKc_MEKK3_like Cataly 97.3 0.0025 5.5E-08 56.1 10.6 75 54-132 7-91 (263)
222 cd06648 STKc_PAK_II Catalytic 97.3 0.0039 8.5E-08 55.9 11.9 79 50-132 20-103 (285)
223 cd08528 STKc_Nek10 Catalytic d 97.3 0.0023 5E-08 56.6 10.3 27 224-250 133-159 (269)
224 cd05572 STKc_cGK_PKG Catalytic 97.3 0.0018 3.9E-08 57.1 9.5 72 57-132 1-80 (262)
225 cd05148 PTKc_Srm_Brk Catalytic 97.3 0.0033 7.2E-08 55.3 11.2 74 55-132 12-89 (261)
226 cd05105 PTKc_PDGFR_alpha Catal 97.3 0.0035 7.7E-08 59.5 12.0 81 50-133 38-129 (400)
227 cd06646 STKc_MAP4K5 Catalytic 97.3 0.0038 8.1E-08 55.2 11.5 78 51-132 11-93 (267)
228 cd07863 STKc_CDK4 Catalytic do 97.3 0.004 8.7E-08 55.7 11.8 76 54-129 5-91 (288)
229 cd06621 PKc_MAPKK_Pek1_like Ca 97.3 0.0023 5E-08 57.4 10.1 79 51-132 3-88 (287)
230 KOG0581 Mitogen-activated prot 97.3 0.00063 1.4E-08 62.0 6.3 137 50-251 80-225 (364)
231 cd06610 STKc_OSR1_SPAK Catalyt 97.3 0.0034 7.4E-08 55.2 11.1 75 54-132 6-86 (267)
232 cd06626 STKc_MEKK4 Catalytic d 97.3 0.0033 7.1E-08 55.3 10.9 75 54-132 5-86 (264)
233 cd07876 STKc_JNK2 Catalytic do 97.3 0.0015 3.2E-08 60.8 9.1 75 53-130 25-111 (359)
234 PHA03209 serine/threonine kina 97.2 0.0021 4.6E-08 59.9 10.0 71 52-129 69-141 (357)
235 PHA03211 serine/threonine kina 97.2 0.0025 5.5E-08 61.6 10.7 69 54-129 174-244 (461)
236 KOG0583 Serine/threonine prote 97.2 0.0042 9.1E-08 58.3 11.8 140 53-255 21-172 (370)
237 TIGR02569 TIGR02569_actnb cons 97.2 0.022 4.8E-07 49.8 15.2 209 55-295 19-248 (272)
238 cd05033 PTKc_EphR Catalytic do 97.2 0.0047 1E-07 54.6 11.7 77 52-132 7-92 (266)
239 cd06611 STKc_SLK_like Catalyti 97.2 0.0029 6.3E-08 56.4 10.4 73 56-132 12-89 (280)
240 cd06633 STKc_TAO3 Catalytic do 97.2 0.004 8.6E-08 56.8 11.4 92 34-129 6-105 (313)
241 smart00221 STYKc Protein kinas 97.2 0.0046 1E-07 52.6 11.2 75 54-132 4-84 (225)
242 cd05581 STKc_PDK1 Catalytic do 97.2 0.00088 1.9E-08 59.5 6.9 76 54-132 6-89 (280)
243 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.2 0.0065 1.4E-07 54.2 12.6 79 51-132 6-94 (284)
244 cd06627 STKc_Cdc7_like Catalyt 97.2 0.0044 9.5E-08 54.0 11.2 75 54-132 5-86 (254)
245 cd06628 STKc_MAPKKK_Byr2_like 97.2 0.0035 7.5E-08 55.4 10.6 74 55-132 6-93 (267)
246 cd06608 STKc_myosinIII_like Ca 97.2 0.00096 2.1E-08 59.0 6.9 77 54-132 11-96 (275)
247 cd07861 STKc_CDK1_euk Catalyti 97.2 0.0033 7.1E-08 56.1 10.5 72 54-129 5-83 (285)
248 cd05115 PTKc_Zap-70 Catalytic 97.2 0.0044 9.5E-08 54.7 11.1 71 57-132 3-81 (257)
249 KOG0616 cAMP-dependent protein 97.2 0.0038 8.3E-08 55.6 10.3 132 53-249 48-188 (355)
250 PHA03212 serine/threonine kina 97.2 0.0041 9E-08 58.8 11.6 70 53-129 96-167 (391)
251 cd05055 PTKc_PDGFR Catalytic d 97.2 0.0041 8.9E-08 56.4 11.2 79 51-132 37-126 (302)
252 cd05099 PTKc_FGFR4 Catalytic d 97.2 0.0062 1.4E-07 55.4 12.4 80 50-132 13-105 (314)
253 cd06629 STKc_MAPKKK_Bck1_like 97.2 0.0034 7.4E-08 55.6 10.4 76 53-132 5-95 (272)
254 cd05611 STKc_Rim15_like Cataly 97.2 0.0031 6.8E-08 55.5 10.1 75 55-132 2-84 (260)
255 KOG0612 Rho-associated, coiled 97.2 0.00024 5.3E-09 72.9 3.2 130 57-250 83-220 (1317)
256 cd05066 PTKc_EphR_A Catalytic 97.2 0.0047 1E-07 54.6 11.2 75 54-132 9-92 (267)
257 PTZ00266 NIMA-related protein 97.2 0.002 4.4E-08 67.1 9.8 78 52-132 16-101 (1021)
258 cd05123 STKc_AGC Catalytic dom 97.2 0.0032 7E-08 54.9 9.9 72 57-132 1-80 (250)
259 cd05577 STKc_GRK Catalytic dom 97.2 0.0026 5.6E-08 56.7 9.5 72 57-132 1-80 (277)
260 cd06606 STKc_MAPKKK Catalytic 97.2 0.00096 2.1E-08 58.2 6.5 76 54-132 5-88 (260)
261 cd05047 PTKc_Tie Catalytic dom 97.2 0.0045 9.9E-08 54.9 11.0 73 57-132 3-83 (270)
262 cd07837 STKc_CdkB_plant Cataly 97.2 0.004 8.6E-08 55.9 10.6 75 53-129 5-90 (295)
263 PHA03207 serine/threonine kina 97.2 0.0013 2.9E-08 62.1 7.8 72 52-129 95-170 (392)
264 cd07875 STKc_JNK1 Catalytic do 97.2 0.0029 6.4E-08 59.0 10.0 75 53-130 28-114 (364)
265 cd07841 STKc_CDK7 Catalytic do 97.2 0.0051 1.1E-07 55.4 11.3 73 54-131 5-87 (298)
266 cd05090 PTKc_Ror1 Catalytic do 97.1 0.0092 2E-07 53.3 12.7 75 54-132 10-94 (283)
267 cd05097 PTKc_DDR_like Catalyti 97.1 0.0026 5.6E-08 57.3 9.2 74 55-132 11-104 (295)
268 cd05061 PTKc_InsR Catalytic do 97.1 0.0039 8.5E-08 55.9 10.3 76 53-132 10-96 (288)
269 cd06623 PKc_MAPKK_plant_like C 97.1 0.0024 5.2E-08 56.1 8.8 75 54-132 6-86 (264)
270 cd05050 PTKc_Musk Catalytic do 97.1 0.0059 1.3E-07 54.7 11.4 77 52-132 8-95 (288)
271 cd06642 STKc_STK25-YSK1 Cataly 97.1 0.0018 4E-08 57.7 8.0 74 55-132 10-89 (277)
272 cd07870 STKc_PFTAIRE2 Catalyti 97.1 0.0074 1.6E-07 54.1 12.0 74 52-129 8-87 (291)
273 cd07859 STKc_TDY_MAPK_plant Ca 97.1 0.0035 7.6E-08 57.5 10.0 73 54-129 5-88 (338)
274 cd05101 PTKc_FGFR2 Catalytic d 97.1 0.0051 1.1E-07 55.6 10.9 77 53-132 19-108 (304)
275 cd05095 PTKc_DDR2 Catalytic do 97.1 0.0045 9.8E-08 55.8 10.5 76 53-132 9-106 (296)
276 cd07844 STKc_PCTAIRE_like Cata 97.1 0.0049 1.1E-07 55.2 10.7 74 52-129 8-87 (291)
277 cd06612 STKc_MST1_2 Catalytic 97.1 0.0038 8.2E-08 54.6 9.6 75 54-132 8-85 (256)
278 cd06609 STKc_MST3_like Catalyt 97.1 0.0058 1.3E-07 54.2 10.9 74 55-132 7-86 (274)
279 cd05098 PTKc_FGFR1 Catalytic d 97.1 0.0053 1.1E-07 55.7 10.8 78 52-132 21-111 (307)
280 cd06605 PKc_MAPKK Catalytic do 97.1 0.0019 4E-08 57.0 7.6 75 54-132 6-86 (265)
281 cd06643 STKc_SLK Catalytic dom 97.1 0.0099 2.1E-07 53.0 12.4 74 55-132 11-89 (282)
282 cd05089 PTKc_Tie1 Catalytic do 97.1 0.012 2.7E-07 53.0 13.1 75 55-132 8-90 (297)
283 KOG4250 TANK binding protein k 97.1 0.0013 2.9E-08 64.6 6.9 79 51-132 15-104 (732)
284 cd05048 PTKc_Ror Catalytic Dom 97.1 0.0036 7.7E-08 55.9 9.5 76 53-132 9-95 (283)
285 cd05062 PTKc_IGF-1R Catalytic 97.1 0.0026 5.6E-08 56.7 8.5 75 54-132 11-96 (277)
286 cd05046 PTK_CCK4 Pseudokinase 97.1 0.0066 1.4E-07 53.9 11.0 78 51-132 7-95 (275)
287 cd05108 PTKc_EGFR Catalytic do 97.1 0.0069 1.5E-07 55.2 11.4 78 50-132 8-95 (316)
288 cd05116 PTKc_Syk Catalytic dom 97.1 0.0076 1.6E-07 53.0 11.3 72 56-132 2-82 (257)
289 cd05118 STKc_CMGC Catalytic do 97.1 0.0054 1.2E-07 54.5 10.4 72 54-129 4-82 (283)
290 cd08218 STKc_Nek1 Catalytic do 97.1 0.0056 1.2E-07 53.6 10.4 76 53-132 4-86 (256)
291 cd06620 PKc_MAPKK_Byr1_like Ca 97.1 0.0021 4.5E-08 57.6 7.7 75 54-132 10-90 (284)
292 cd06617 PKc_MKK3_6 Catalytic d 97.1 0.0076 1.6E-07 53.7 11.3 74 53-129 5-84 (283)
293 cd06607 STKc_TAO Catalytic dom 97.1 0.0074 1.6E-07 54.7 11.4 90 37-130 3-100 (307)
294 cd05605 STKc_GRK4_like Catalyt 97.1 0.0063 1.4E-07 54.6 10.8 75 54-132 5-87 (285)
295 cd08221 STKc_Nek9 Catalytic do 97.1 0.0071 1.5E-07 53.0 11.0 76 53-132 4-86 (256)
296 KOG0594 Protein kinase PCTAIRE 97.1 0.0043 9.2E-08 56.2 9.4 149 52-259 14-176 (323)
297 cd05054 PTKc_VEGFR Catalytic d 97.0 0.0081 1.8E-07 55.5 11.7 77 54-132 12-99 (337)
298 cd05060 PTKc_Syk_like Catalyti 97.0 0.0093 2E-07 52.4 11.6 72 56-132 2-82 (257)
299 cd05065 PTKc_EphR_B Catalytic 97.0 0.0081 1.8E-07 53.1 11.3 75 54-132 9-92 (269)
300 cd06622 PKc_MAPKK_PBS2_like Ca 97.0 0.0031 6.7E-08 56.4 8.6 75 54-132 6-86 (286)
301 cd05630 STKc_GRK6 Catalytic do 97.0 0.0069 1.5E-07 54.4 10.8 75 54-132 5-87 (285)
302 cd05063 PTKc_EphR_A2 Catalytic 97.0 0.0083 1.8E-07 53.0 11.2 78 51-132 7-93 (268)
303 cd06659 STKc_PAK6 Catalytic do 97.0 0.006 1.3E-07 55.2 10.5 77 52-132 24-105 (297)
304 cd05057 PTKc_EGFR_like Catalyt 97.0 0.012 2.6E-07 52.4 12.3 78 50-132 8-95 (279)
305 cd07836 STKc_Pho85 Catalytic d 97.0 0.0078 1.7E-07 53.6 11.0 73 53-129 4-82 (284)
306 cd07846 STKc_CDKL2_3 Catalytic 97.0 0.0046 9.9E-08 55.2 9.5 75 53-131 5-86 (286)
307 cd06635 STKc_TAO1 Catalytic do 97.0 0.012 2.6E-07 53.7 12.4 75 51-129 27-109 (317)
308 cd07874 STKc_JNK3 Catalytic do 97.0 0.0034 7.4E-08 58.3 8.9 75 53-130 21-107 (355)
309 cd05109 PTKc_HER2 Catalytic do 97.0 0.019 4E-07 51.2 13.4 78 50-132 8-95 (279)
310 cd07835 STKc_CDK1_like Catalyt 97.0 0.0057 1.2E-07 54.5 10.0 72 54-129 4-82 (283)
311 cd07867 STKc_CDC2L6 Catalytic 97.0 0.0076 1.6E-07 54.7 10.9 72 55-129 7-84 (317)
312 cd05037 PTK_Jak_rpt1 Pseudokin 97.0 0.009 2E-07 52.3 11.0 72 56-132 2-87 (259)
313 cd05606 STKc_beta_ARK Catalyti 97.0 0.0087 1.9E-07 53.5 11.1 75 57-132 2-84 (278)
314 cd07853 STKc_NLK Catalytic dom 97.0 0.0062 1.4E-07 57.0 10.5 73 54-129 5-88 (372)
315 cd05092 PTKc_TrkA Catalytic do 97.0 0.0074 1.6E-07 53.9 10.5 78 51-132 7-94 (280)
316 cd05094 PTKc_TrkC Catalytic do 97.0 0.0046 1E-07 55.6 9.2 75 54-132 10-94 (291)
317 cd06632 STKc_MEKK1_plant Catal 97.0 0.011 2.3E-07 51.8 11.2 74 55-132 6-89 (258)
318 cd05578 STKc_Yank1 Catalytic d 97.0 0.0051 1.1E-07 54.0 9.2 75 54-132 5-87 (258)
319 cd05086 PTKc_Aatyk2 Catalytic 97.0 0.0039 8.5E-08 55.3 8.5 73 56-132 2-82 (268)
320 KOG0198 MEKK and related serin 97.0 0.0016 3.4E-08 59.4 5.8 74 53-132 21-103 (313)
321 KOG0578 p21-activated serine/t 96.9 0.0039 8.6E-08 59.8 8.6 159 33-258 253-423 (550)
322 PTZ00024 cyclin-dependent prot 96.9 0.0036 7.8E-08 57.5 8.2 70 56-129 16-104 (335)
323 cd05093 PTKc_TrkB Catalytic do 96.9 0.009 1.9E-07 53.6 10.6 76 53-132 9-94 (288)
324 cd05107 PTKc_PDGFR_beta Cataly 96.9 0.0053 1.1E-07 58.3 9.3 79 51-132 39-128 (401)
325 cd06651 STKc_MEKK3 Catalytic d 96.9 0.012 2.5E-07 52.1 11.0 76 54-132 7-93 (266)
326 cd05036 PTKc_ALK_LTK Catalytic 96.9 0.018 4E-07 51.2 12.4 78 51-132 8-96 (277)
327 cd06647 STKc_PAK_I Catalytic d 96.9 0.012 2.7E-07 53.0 11.3 78 51-132 21-103 (293)
328 KOG0600 Cdc2-related protein k 96.9 0.0085 1.8E-07 57.0 10.2 136 52-250 120-263 (560)
329 cd07847 STKc_CDKL1_4 Catalytic 96.9 0.0073 1.6E-07 53.8 9.7 73 54-130 6-85 (286)
330 cd07860 STKc_CDK2_3 Catalytic 96.9 0.011 2.3E-07 52.8 10.8 73 53-129 4-83 (284)
331 cd06652 STKc_MEKK2 Catalytic d 96.9 0.012 2.6E-07 51.9 10.8 76 54-132 7-93 (265)
332 cd07830 STKc_MAK_like Catalyti 96.8 0.0078 1.7E-07 53.6 9.5 72 55-129 5-82 (283)
333 cd07833 STKc_CDKL Catalytic do 96.8 0.011 2.4E-07 52.7 10.5 73 54-130 6-85 (288)
334 cd07842 STKc_CDK8_like Catalyt 96.8 0.0091 2E-07 54.1 10.1 73 54-129 5-88 (316)
335 cd07838 STKc_CDK4_6_like Catal 96.8 0.019 4.1E-07 51.1 12.0 76 54-129 4-90 (287)
336 cd05044 PTKc_c-ros Catalytic d 96.8 0.0062 1.3E-07 53.8 8.8 73 56-132 2-86 (269)
337 cd05100 PTKc_FGFR3 Catalytic d 96.8 0.012 2.7E-07 54.0 11.1 76 54-132 17-105 (334)
338 PTZ00284 protein kinase; Provi 96.8 0.0087 1.9E-07 58.0 10.3 77 53-129 133-216 (467)
339 cd05045 PTKc_RET Catalytic dom 96.8 0.016 3.6E-07 51.9 11.4 74 55-132 6-90 (290)
340 cd07839 STKc_CDK5 Catalytic do 96.8 0.0073 1.6E-07 53.9 9.1 72 54-129 5-83 (284)
341 cd05035 PTKc_Axl_like Catalyti 96.8 0.012 2.7E-07 51.9 10.4 75 55-132 5-94 (273)
342 cd07868 STKc_CDK8 Catalytic do 96.8 0.012 2.7E-07 53.4 10.7 72 55-129 7-84 (317)
343 cd06637 STKc_TNIK Catalytic do 96.8 0.004 8.7E-08 55.1 7.2 77 54-132 11-96 (272)
344 cd06636 STKc_MAP4K4_6 Catalyti 96.8 0.0066 1.4E-07 54.1 8.6 77 54-132 21-106 (282)
345 cd07840 STKc_CDK9_like Catalyt 96.8 0.013 2.8E-07 52.1 10.5 73 54-129 4-84 (287)
346 cd08225 STKc_Nek5 Catalytic do 96.8 0.0084 1.8E-07 52.4 9.1 75 54-132 5-86 (257)
347 cd05051 PTKc_DDR Catalytic dom 96.8 0.0067 1.5E-07 54.4 8.6 75 54-132 10-106 (296)
348 cd06653 STKc_MEKK3_like_1 Cata 96.8 0.016 3.6E-07 51.0 10.8 76 54-132 7-93 (264)
349 cd06645 STKc_MAP4K3 Catalytic 96.8 0.017 3.8E-07 50.9 11.0 74 55-132 15-93 (267)
350 cd05040 PTKc_Ack_like Catalyti 96.7 0.028 6E-07 49.2 12.1 72 56-132 2-82 (257)
351 KOG0575 Polo-like serine/threo 96.7 0.015 3.3E-07 56.4 10.9 130 57-250 26-163 (592)
352 cd05077 PTK_Jak1_rpt1 Pseudoki 96.7 0.026 5.7E-07 49.8 12.0 73 56-132 2-91 (262)
353 PHA02988 hypothetical protein; 96.7 0.019 4.2E-07 51.5 11.3 75 55-132 26-109 (283)
354 cd07850 STKc_JNK Catalytic dom 96.7 0.015 3.3E-07 53.9 10.8 75 52-129 19-105 (353)
355 cd05111 PTK_HER3 Pseudokinase 96.7 0.034 7.5E-07 49.6 12.8 27 224-250 128-154 (279)
356 cd06658 STKc_PAK5 Catalytic do 96.7 0.01 2.3E-07 53.4 9.3 75 54-132 27-106 (292)
357 cd05056 PTKc_FAK Catalytic dom 96.7 0.046 1E-06 48.3 13.4 76 52-132 9-93 (270)
358 PLN00009 cyclin-dependent kina 96.7 0.016 3.4E-07 52.1 10.4 73 53-129 6-85 (294)
359 cd07845 STKc_CDK10 Catalytic d 96.7 0.013 2.7E-07 53.2 9.9 75 52-129 10-92 (309)
360 cd08220 STKc_Nek8 Catalytic do 96.7 0.018 4E-07 50.2 10.5 76 53-132 4-86 (256)
361 cd07878 STKc_p38beta_MAPK11 Ca 96.7 0.0086 1.9E-07 55.3 8.7 27 224-250 137-163 (343)
362 cd08229 STKc_Nek7 Catalytic do 96.7 0.0074 1.6E-07 53.2 7.9 74 55-132 8-89 (267)
363 cd07831 STKc_MOK Catalytic dom 96.7 0.017 3.6E-07 51.3 10.2 74 54-129 4-84 (282)
364 KOG1163 Casein kinase (serine/ 96.6 0.043 9.3E-07 47.8 11.9 78 48-128 14-94 (341)
365 cd07880 STKc_p38gamma_MAPK12 C 96.6 0.013 2.8E-07 54.2 9.6 74 51-127 17-102 (343)
366 KOG0667 Dual-specificity tyros 96.6 0.014 3.1E-07 56.9 9.9 36 223-258 307-346 (586)
367 cd06618 PKc_MKK7 Catalytic dom 96.6 0.013 2.9E-07 52.7 9.4 76 51-129 17-98 (296)
368 PTZ00036 glycogen synthase kin 96.6 0.016 3.6E-07 55.7 10.5 75 51-129 68-151 (440)
369 cd05064 PTKc_EphR_A10 Catalyti 96.6 0.044 9.6E-07 48.4 12.3 75 54-132 10-93 (266)
370 cd06616 PKc_MKK4 Catalytic dom 96.6 0.026 5.5E-07 50.5 10.8 73 54-129 9-87 (288)
371 KOG0607 MAP kinase-interacting 96.6 0.0045 9.8E-08 55.7 5.6 65 74-151 105-172 (463)
372 cd06624 STKc_ASK Catalytic dom 96.6 0.046 1E-06 48.2 12.3 74 55-132 14-92 (268)
373 cd05076 PTK_Tyk2_rpt1 Pseudoki 96.6 0.025 5.5E-07 50.4 10.6 55 74-132 46-103 (274)
374 cd07855 STKc_ERK5 Catalytic do 96.5 0.016 3.5E-07 53.2 9.6 76 54-129 10-92 (334)
375 PTZ00283 serine/threonine prot 96.5 0.02 4.4E-07 55.9 10.7 27 224-250 162-188 (496)
376 cd08227 PK_STRAD_alpha Pseudok 96.5 0.011 2.5E-07 54.1 8.5 72 57-132 6-86 (327)
377 cd06657 STKc_PAK4 Catalytic do 96.5 0.018 3.9E-07 51.9 9.6 75 54-132 25-104 (292)
378 cd05091 PTKc_Ror2 Catalytic do 96.5 0.018 3.9E-07 51.3 9.5 74 55-132 11-95 (283)
379 cd05576 STKc_RPK118_like Catal 96.5 0.018 3.9E-07 50.1 9.0 27 224-250 104-130 (237)
380 KOG2052 Activin A type IB rece 96.5 0.023 4.9E-07 53.4 9.7 145 50-250 212-361 (513)
381 KOG0587 Traf2- and Nck-interac 96.5 0.052 1.1E-06 55.0 12.8 74 56-131 26-107 (953)
382 cd08530 STKc_CNK2-like Catalyt 96.5 0.025 5.5E-07 49.3 9.9 75 54-132 5-86 (256)
383 KOG0577 Serine/threonine prote 96.5 0.0023 5E-08 61.9 3.3 92 33-130 10-111 (948)
384 cd06630 STKc_MEKK1 Catalytic d 96.4 0.024 5.1E-07 49.9 9.7 74 55-132 6-90 (268)
385 cd05110 PTKc_HER4 Catalytic do 96.4 0.043 9.4E-07 49.6 11.2 77 51-132 9-95 (303)
386 cd05032 PTKc_InsR_like Catalyt 96.4 0.057 1.2E-06 47.8 11.7 78 51-132 8-96 (277)
387 cd05075 PTKc_Axl Catalytic dom 96.4 0.023 4.9E-07 50.3 9.1 75 55-132 5-93 (272)
388 cd07866 STKc_BUR1 Catalytic do 96.4 0.033 7.2E-07 50.2 10.3 76 51-129 10-99 (311)
389 cd05058 PTKc_Met_Ron Catalytic 96.3 0.082 1.8E-06 46.3 12.5 27 224-250 117-143 (262)
390 cd07849 STKc_ERK1_2_like Catal 96.3 0.026 5.7E-07 51.9 9.6 74 53-129 9-92 (336)
391 KOG0663 Protein kinase PITSLRE 96.3 0.018 3.9E-07 52.2 8.0 143 54-258 81-232 (419)
392 cd07834 STKc_MAPK Catalytic do 96.3 0.031 6.7E-07 51.1 9.9 73 54-129 5-88 (330)
393 KOG0585 Ca2+/calmodulin-depend 96.3 0.035 7.5E-07 52.6 10.0 73 56-131 104-196 (576)
394 cd07856 STKc_Sty1_Hog1 Catalyt 96.3 0.04 8.7E-07 50.6 10.6 75 52-129 13-94 (328)
395 COG2112 Predicted Ser/Thr prot 96.3 0.008 1.7E-07 49.9 5.2 75 51-132 24-99 (201)
396 KOG0193 Serine/threonine prote 96.3 0.018 3.9E-07 56.0 8.2 136 50-250 393-533 (678)
397 cd07857 STKc_MPK1 Catalytic do 96.3 0.041 9E-07 50.5 10.6 74 54-129 5-90 (332)
398 cd07843 STKc_CDC2L1 Catalytic 96.2 0.024 5.3E-07 50.8 8.7 73 54-129 10-90 (293)
399 cd07865 STKc_CDK9 Catalytic do 96.2 0.045 9.8E-07 49.3 10.3 77 53-129 16-103 (310)
400 cd08216 PK_STRAD Pseudokinase 96.2 0.036 7.8E-07 50.2 9.6 26 224-249 120-145 (314)
401 PLN00113 leucine-rich repeat r 96.2 0.044 9.5E-07 58.1 11.3 73 55-132 696-770 (968)
402 cd07864 STKc_CDK12 Catalytic d 96.1 0.048 1E-06 49.0 10.0 73 54-129 12-100 (302)
403 cd08226 PK_STRAD_beta Pseudoki 96.1 0.025 5.5E-07 51.8 8.2 69 60-132 11-86 (328)
404 cd05078 PTK_Jak2_Jak3_rpt1 Pse 96.1 0.031 6.6E-07 49.2 8.4 73 56-132 2-86 (258)
405 PHA03210 serine/threonine kina 96.1 0.0078 1.7E-07 58.9 4.9 27 224-250 286-312 (501)
406 PLN03225 Serine/threonine-prot 96.1 0.029 6.2E-07 55.8 8.8 27 224-250 274-301 (566)
407 PF07714 Pkinase_Tyr: Protein 96.1 0.097 2.1E-06 46.2 11.5 75 54-132 4-88 (259)
408 KOG1164 Casein kinase (serine/ 96.0 0.11 2.3E-06 47.8 12.0 76 52-127 21-103 (322)
409 KOG0668 Casein kinase II, alph 96.0 0.0041 8.9E-08 53.5 2.3 105 24-130 7-120 (338)
410 PLN03224 probable serine/threo 96.0 0.09 1.9E-06 51.5 11.9 27 224-250 328-354 (507)
411 KOG1151 Tousled-like protein k 96.0 0.03 6.5E-07 52.7 8.0 29 222-250 587-618 (775)
412 cd06634 STKc_TAO2 Catalytic do 96.0 0.046 1E-06 49.6 9.2 74 53-130 19-100 (308)
413 KOG0591 NIMA (never in mitosis 96.0 0.0036 7.8E-08 55.4 1.8 71 56-132 26-107 (375)
414 cd07852 STKc_MAPK15 Catalytic 95.9 0.06 1.3E-06 49.5 9.9 73 55-129 13-93 (337)
415 KOG0032 Ca2+/calmodulin-depend 95.9 0.021 4.5E-07 53.8 6.8 75 55-132 41-123 (382)
416 smart00220 S_TKc Serine/Threon 95.9 0.054 1.2E-06 46.3 9.0 66 63-132 3-74 (244)
417 cd05043 PTK_Ryk Pseudokinase d 95.9 0.11 2.3E-06 46.2 11.0 76 54-132 11-96 (280)
418 cd07858 STKc_TEY_MAPK_plant Ca 95.9 0.031 6.7E-07 51.5 7.7 74 53-129 9-93 (337)
419 cd07829 STKc_CDK_like Catalyti 95.8 0.081 1.7E-06 46.8 9.9 71 55-129 5-82 (282)
420 cd07879 STKc_p38delta_MAPK13 C 95.7 0.083 1.8E-06 48.8 9.7 74 52-128 18-103 (342)
421 KOG0197 Tyrosine kinases [Sign 95.5 0.039 8.3E-07 52.6 6.6 75 54-132 211-288 (468)
422 cd07851 STKc_p38 Catalytic dom 95.4 0.068 1.5E-06 49.4 8.0 27 224-250 137-163 (343)
423 cd07854 STKc_MAPK4_6 Catalytic 95.3 0.13 2.7E-06 47.5 9.7 79 48-129 4-100 (342)
424 cd07877 STKc_p38alpha_MAPK14 C 95.3 0.15 3.4E-06 47.0 10.2 27 224-250 139-165 (345)
425 PF10707 YrbL-PhoP_reg: PhoP r 95.2 0.43 9.4E-06 40.7 11.8 77 52-130 4-102 (199)
426 KOG2345 Serine/threonine prote 95.2 0.029 6.4E-07 48.9 4.6 30 222-251 146-175 (302)
427 KOG0694 Serine/threonine prote 95.2 0.19 4.1E-06 49.8 10.6 148 54-265 373-529 (694)
428 KOG1167 Serine/threonine prote 95.2 0.068 1.5E-06 49.7 7.2 92 36-130 22-120 (418)
429 KOG4236 Serine/threonine prote 95.1 0.2 4.3E-06 48.4 10.2 73 51-130 566-648 (888)
430 COG3281 Ble Uncharacterized pr 95.1 0.072 1.6E-06 48.6 6.9 114 135-263 200-332 (438)
431 KOG0582 Ste20-like serine/thre 94.9 0.23 4.9E-06 47.0 9.7 72 55-132 32-111 (516)
432 KOG1094 Discoidin domain recep 94.8 0.048 1E-06 53.1 5.3 82 47-132 536-622 (807)
433 KOG0588 Serine/threonine prote 94.3 0.14 3.1E-06 50.5 7.3 55 74-132 39-99 (786)
434 KOG0584 Serine/threonine prote 94.3 0.11 2.5E-06 50.7 6.5 102 205-325 148-261 (632)
435 KOG1166 Mitotic checkpoint ser 94.2 0.06 1.3E-06 56.0 4.8 33 51-83 699-733 (974)
436 KOG0597 Serine-threonine prote 94.2 0.14 3E-06 49.8 6.7 69 55-129 8-85 (808)
437 cd08222 STKc_Nek11 Catalytic d 94.1 0.16 3.5E-06 44.4 6.8 26 224-250 125-150 (260)
438 PF10009 DUF2252: Uncharacteri 94.0 0.074 1.6E-06 50.1 4.6 60 221-280 40-120 (385)
439 KOG2269 Serine/threonine prote 94.0 0.13 2.8E-06 47.1 5.8 33 223-256 402-436 (531)
440 KOG0658 Glycogen synthase kina 93.7 0.04 8.8E-07 50.4 2.1 49 50-99 25-75 (364)
441 KOG0984 Mitogen-activated prot 93.6 0.042 9E-07 46.8 1.9 28 223-250 167-194 (282)
442 KOG0586 Serine/threonine prote 92.9 0.91 2E-05 44.5 10.0 71 222-294 172-247 (596)
443 PHA02882 putative serine/threo 92.9 0.059 1.3E-06 48.5 2.0 27 224-250 145-171 (294)
444 cd05124 AFK Actin-Fragmin Kina 92.6 0.43 9.4E-06 41.3 6.7 73 54-132 4-104 (238)
445 PF09192 Act-Frag_cataly: Acti 92.5 0.73 1.6E-05 41.1 8.1 77 50-132 26-135 (275)
446 KOG1152 Signal transduction se 92.3 1.9 4E-05 42.4 11.1 74 51-125 563-649 (772)
447 PF13575 DUF4135: Domain of un 92.0 1.8 4E-05 40.6 10.8 95 50-152 44-153 (370)
448 KOG0659 Cdk activating kinase 91.2 0.14 3.1E-06 45.1 2.3 36 223-258 119-156 (318)
449 KOG0603 Ribosomal protein S6 k 91.2 0.14 3.1E-06 50.1 2.4 28 223-250 433-461 (612)
450 KOG0983 Mitogen-activated prot 91.0 0.17 3.8E-06 44.9 2.5 28 222-249 209-236 (391)
451 KOG0589 Serine/threonine prote 90.5 0.97 2.1E-05 43.0 7.2 73 54-132 9-91 (426)
452 KOG1290 Serine/threonine prote 90.1 1.7 3.8E-05 41.7 8.5 49 53-101 82-134 (590)
453 KOG4721 Serine/threonine prote 89.8 0.67 1.4E-05 45.4 5.5 71 50-130 125-197 (904)
454 KOG0580 Serine/threonine prote 89.5 0.46 1E-05 41.4 3.8 29 222-250 141-169 (281)
455 KOG0599 Phosphorylase kinase g 89.3 0.21 4.6E-06 44.3 1.7 39 223-261 141-183 (411)
456 KOG1165 Casein kinase (serine/ 89.2 3 6.5E-05 38.4 8.9 69 55-127 34-106 (449)
457 KOG1035 eIF-2alpha kinase GCN2 87.7 0.49 1.1E-05 50.0 3.4 28 223-250 715-742 (1351)
458 KOG0199 ACK and related non-re 87.4 0.3 6.5E-06 48.8 1.6 138 50-250 111-257 (1039)
459 PF07387 Seadorna_VP7: Seadorn 87.2 0.36 7.9E-06 41.9 1.8 31 221-251 159-189 (308)
460 PLN00181 protein SPA1-RELATED; 86.4 0.8 1.7E-05 47.6 4.2 27 223-249 98-124 (793)
461 KOG4158 BRPK/PTEN-induced prot 85.7 0.61 1.3E-05 43.7 2.6 35 223-257 359-397 (598)
462 cd05074 PTKc_Tyro3 Catalytic d 85.0 0.58 1.3E-05 41.1 2.1 27 224-250 132-158 (273)
463 KOG0593 Predicted protein kina 84.6 0.59 1.3E-05 42.2 1.8 43 223-265 119-167 (396)
464 KOG1006 Mitogen-activated prot 84.3 0.57 1.2E-05 41.6 1.7 28 223-250 186-213 (361)
465 PHA00451 protein kinase 84.3 0.78 1.7E-05 40.5 2.5 32 228-259 192-223 (362)
466 PF14531 Kinase-like: Kinase-l 83.9 0.67 1.4E-05 41.9 2.0 36 223-258 163-200 (288)
467 KOG0664 Nemo-like MAPK-related 83.9 0.63 1.4E-05 41.4 1.7 28 223-250 174-201 (449)
468 KOG0660 Mitogen-activated prot 83.6 1.1 2.3E-05 41.2 3.1 33 222-254 142-175 (359)
469 COG4320 Uncharacterized protei 83.0 7.4 0.00016 35.4 8.0 68 213-282 49-137 (410)
470 KOG0611 Predicted serine/threo 82.7 1.3 2.8E-05 41.6 3.3 73 222-296 170-247 (668)
471 KOG0670 U4/U6-associated splic 82.6 0.92 2E-05 43.9 2.4 28 223-250 554-582 (752)
472 KOG1236 Predicted unusual prot 82.4 0.64 1.4E-05 44.0 1.3 25 224-248 364-392 (565)
473 KOG0665 Jun-N-terminal kinase 82.4 1.7 3.6E-05 39.6 3.8 35 222-256 135-170 (369)
474 COG5072 ALK1 Serine/threonine 81.3 2.7 5.9E-05 39.3 4.8 83 222-305 339-432 (488)
475 PF12260 PIP49_C: Protein-kina 79.8 10 0.00023 31.8 7.7 36 90-132 8-43 (188)
476 PF07805 HipA_N: HipA-like N-t 79.7 8.7 0.00019 27.3 6.2 51 74-127 28-79 (81)
477 KOG1026 Nerve growth factor re 79.0 5.9 0.00013 40.5 6.8 79 50-132 487-576 (774)
478 KOG1240 Protein kinase contain 78.0 10 0.00023 40.4 8.2 43 38-82 14-56 (1431)
479 KOG1095 Protein tyrosine kinas 75.3 20 0.00043 38.2 9.5 79 50-132 693-782 (1025)
480 KOG0669 Cyclin T-dependent kin 75.1 5 0.00011 35.5 4.4 65 224-288 143-215 (376)
481 KOG0986 G protein-coupled rece 74.6 10 0.00022 36.4 6.6 102 86-249 230-331 (591)
482 KOG4278 Protein tyrosine kinas 74.2 9.1 0.0002 38.3 6.4 73 56-132 274-350 (1157)
483 KOG0666 Cyclin C-dependent kin 73.6 2.3 5.1E-05 38.7 2.1 72 55-129 30-112 (438)
484 KOG0579 Ste20-like serine/thre 72.0 2.5 5.3E-05 42.2 2.0 28 223-250 148-175 (1187)
485 KOG4279 Serine/threonine prote 71.6 39 0.00084 34.6 10.0 72 57-132 583-659 (1226)
486 KOG0661 MAPK related serine/th 71.1 14 0.00031 35.6 6.7 57 202-263 112-172 (538)
487 KOG0662 Cyclin-dependent kinas 71.0 2.4 5.2E-05 35.4 1.5 36 222-257 118-155 (292)
488 smart00146 PI3Kc Phosphoinosit 69.7 3.7 8.1E-05 35.0 2.5 24 228-251 105-128 (202)
489 cd05172 PIKKc_DNA-PK DNA-depen 67.8 3.8 8.3E-05 35.9 2.2 32 223-254 135-167 (235)
490 PF03109 ABC1: ABC1 family; I 64.5 3.8 8.2E-05 31.7 1.3 47 54-100 16-63 (119)
491 cd05170 PIKKc_SMG1 Suppressor 62.4 5.4 0.00012 36.5 2.2 31 223-253 208-239 (307)
492 cd00891 PI3Kc Phosphoinositide 62.0 5 0.00011 37.4 1.9 30 225-254 204-233 (352)
493 KOG0194 Protein tyrosine kinas 61.9 24 0.00053 34.2 6.5 93 55-151 163-283 (474)
494 cd05168 PI4Kc_III_beta Phospho 61.8 5.6 0.00012 36.1 2.1 28 226-253 143-170 (293)
495 cd00142 PI3Kc_like Phosphoinos 61.3 5.8 0.00013 34.3 2.1 26 226-251 130-156 (219)
496 cd00892 PIKKc_ATR ATR (Ataxia 61.1 6 0.00013 34.7 2.2 29 225-253 140-169 (237)
497 cd05169 PIKKc_TOR TOR (Target 61.0 4.9 0.00011 36.1 1.6 29 223-251 180-209 (280)
498 cd04792 LanM-like LanM-like pr 60.6 93 0.002 32.6 11.2 79 64-151 104-192 (825)
499 cd05171 PIKKc_ATM Ataxia telan 60.4 6.3 0.00014 35.5 2.2 31 223-253 180-211 (279)
500 cd05164 PIKKc Phosphoinositide 60.2 6.2 0.00013 34.2 2.1 27 225-251 132-159 (222)
No 1
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=100.00 E-value=3e-51 Score=367.00 Aligned_cols=283 Identities=46% Similarity=0.798 Sum_probs=210.5
Q ss_pred chhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeec
Q 020393 35 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG 113 (326)
Q Consensus 35 ~~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~ 113 (326)
|++|.+.|.+. +.+.+++++++++||..|.+|++++++++||+|+++.....+++.|++.|+.|++..++.||+|+..+
T Consensus 2 w~~i~~~~~~~~~~~~~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G 81 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWG 81 (288)
T ss_dssp HHHHHHHHHHHHTS-----EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEE
T ss_pred hHHHHHHHHHHhCCCCceeeeEecCCCChhheEEEECCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence 57788888887 56667999999999999999999988889999999865578899999999999877789999999998
Q ss_pred ccCCCceEEEEeeecCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHH
Q 020393 114 ALPTGGSYIIMEFIEFGS-SRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 192 (326)
Q Consensus 114 ~~~~~~~~~v~e~l~G~~-~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~ 192 (326)
.. .+..|+||||++... ....++++|+.||+||+... .+.|||+.++++|.+||.|.|.++|.+||.++|+.++++.
T Consensus 82 ~~-~~~~fLlle~l~~~~~~~~~~~~lg~~LA~LH~~~~-~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~ 159 (288)
T PF03881_consen 82 EY-DDDAFLLLEFLEMGSPSPPDWEELGRQLAALHQWSP-AGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLEL 159 (288)
T ss_dssp E--SSCCEEEEE--------CCHHHHHHHHHHHHHH-T---SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHH
T ss_pred ee-cCCceEEEEeecCCCCCchhHHHHHHHHHHHhhhcC-CCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 76 456799999999873 35889999999999999332 2469999999999999999999999999998899999988
Q ss_pred HHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhh-hhcCCChH
Q 020393 193 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS 271 (326)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~-~~~~~~~~ 271 (326)
+.+.+... ..++++.+.+...+.....+|+|||||||+||++++.+|.++|||+.|++||+++|||++ ++++++++
T Consensus 160 ~~~~~~~~---~~~~~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa~yygh~E~DLam~~lfggf~~~ 236 (288)
T PF03881_consen 160 AREKGGLD---AELERLVERLPSLLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPACYYGHREVDLAMTRLFGGFPDE 236 (288)
T ss_dssp HHHCTSS----CHHHHHHHHHHHCCTTS----EEE-SS-SGGGEEEETTE-EEE-S---EEE-CHHHHHHHCCCSTTHHH
T ss_pred HHhhCCch---hHHHHHHHHHHHHhcCCCCCceeeEcCccccceeecCCCCceeeccccccCchHhhhhhhhhhCCCCHH
Confidence 87765432 234445555555555445689999999999999999998899999999999999999987 46889999
Q ss_pred hHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020393 272 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 322 (326)
Q Consensus 272 fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 322 (326)
|+++|.+..|++++|++|..+|+|++.++|..+||++|+.++.++|++|++
T Consensus 237 f~~~Y~~~~Pl~~g~~~R~~lY~Ly~lL~H~~lFG~~Y~~~~~~~l~~ll~ 287 (288)
T PF03881_consen 237 FYDAYQEHYPLSEGWEDRNPLYQLYHLLNHLNLFGGSYRSQVRRILKRLLS 287 (288)
T ss_dssp HHHHHHHHS---TTHHHHHHHHHHHHHHHHHHHC-GCHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999986
No 2
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=6.1e-49 Score=329.56 Aligned_cols=281 Identities=39% Similarity=0.681 Sum_probs=251.8
Q ss_pred chhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeec
Q 020393 35 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG 113 (326)
Q Consensus 35 ~~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~ 113 (326)
|.+|...|.+. |.+ ++.+.++++||..|..|+|.++..+||+|.+......++.+|+.-|+.|++...+.||+|+..+
T Consensus 2 w~~i~~qlse~~g~~-~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G 80 (286)
T COG3001 2 WQAISQQLSEQLGEG-EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLSMFTAEADGLELLARSNTITVPKVIAVG 80 (286)
T ss_pred hHHHHHHHHHHhCch-hhhcccccCCccccceeEeecCCcceEEEecchhhHHHHHHHHHHHHHHHhcCCccccceEEec
Confidence 56777777776 666 8999999999999999999988889999999876567889999999999987679999999998
Q ss_pred ccCCCceEEEEeeecCCCCC-CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHH
Q 020393 114 ALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 192 (326)
Q Consensus 114 ~~~~~~~~~v~e~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~ 192 (326)
.+ .+..|+||+||+-.+.. ..+.++|+.||+||++... +.||+.-+|.+|..++.|.|.++|..||.++|+..+++.
T Consensus 81 ~~-~~~sylVle~L~~~~~d~~~~~~~GqqLA~LH~~~~~-~~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlql 158 (286)
T COG3001 81 AS-RDHSYLVLEYLPTGPLDAHSAFILGQQLARLHQWGGQ-AQFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQL 158 (286)
T ss_pred CC-CCeeEEEEeeccCCCCCchhHHHHHHHHHHHHhhcCc-cccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHH
Confidence 76 67899999999977664 6789999999999999975 479999999999999999999999999999999999999
Q ss_pred HHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhh-hhcCCChH
Q 020393 193 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS 271 (326)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~-~~~~~~~~ 271 (326)
+++++.+.. -++.+++.+.+++.++++.|+|+|||||.+|..+..+| ++|+|+.|.+||++.|||++ .+++++.+
T Consensus 159 ar~rg~~f~---did~~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv~fDPA~y~GDrE~Dlam~elFggfp~e 234 (286)
T COG3001 159 ARERGLTFG---DIDAIVEKIQELLADHQPQPSLLHGDLWSGNCAFGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPE 234 (286)
T ss_pred HHHhCCCcc---CHHHHHHHHHHHHhcCCCCcceeecccccccccccCCC-CeeeccccccCCcccceehhhhhcCCcHH
Confidence 988865432 23556666666777777889999999999999999998 99999999999999999998 56889999
Q ss_pred hHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020393 272 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 322 (326)
Q Consensus 272 fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 322 (326)
|+++|.++.|++.+|++|..+|.|+..++|...||+.|.+.++.++++.|+
T Consensus 235 fy~gY~sv~PL~~G~~eRk~iYqLY~llnh~~~FGg~Y~~~a~k~i~~iL~ 285 (286)
T COG3001 235 FYDGYQSVSPLPAGYLERKPIYQLYHLLNHANLFGGHYLVEAQKSIDRILS 285 (286)
T ss_pred HHHhhhccCCCCCchHHHhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999875
No 3
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=100.00 E-value=4.4e-47 Score=314.63 Aligned_cols=286 Identities=49% Similarity=0.880 Sum_probs=254.4
Q ss_pred HHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393 39 REWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT 117 (326)
Q Consensus 39 ~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~ 117 (326)
+++|... +.. .|+.+-.+++|+++..--..|+.|+++||.++...+++++.|.+.|+++.+-..+.||+|+...+.+.
T Consensus 2 ee~l~ael~~~-~vr~~gs~gggcI~~~r~ydtDaG~~FvK~nr~~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~ 80 (313)
T KOG3021|consen 2 EELLRAELGLN-NVRALGSVGGGCISDGRHYDTDAGKVFVKVNRSIARDMFEGELASLEAIQSTETVLVPRPIKVIDLPG 80 (313)
T ss_pred hHHHHHhcCcc-eeeeecCCCCceeccccccccCCccEEEEeccccchHHHhhHHHHHHHHHhcCceecCCceeeEecCC
Confidence 3455544 333 56677777889988877777899999999999877899999999999998876799999999988778
Q ss_pred CceEEEEeeecCCCCCCcHHHHHHHHHHHh------------hcCCCC-----------CCCCCCCCCcccccccCCCCC
Q 020393 118 GGSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSS-----------KGFGFDVDNTIGSTPQINKWT 174 (326)
Q Consensus 118 ~~~~~v~e~l~G~~~~~~~~~lg~~La~lH------------~~~~~~-----------~~fg~~~~~~~~~~~~~~~~~ 174 (326)
|..++|||+++-..+++++..+|..||.|| ....-. ..|||...+++|.+||.|+|.
T Consensus 81 Ggs~lime~idf~~lr~~~a~lG~qlAdmHl~n~kl~e~r~~~~~tv~rgge~~e~~~v~~FGF~v~tccG~lpQvNdW~ 160 (313)
T KOG3021|consen 81 GGSSLIMEHIDFQGLRSDAAKLGSQLADMHLKNEKLAEARRTEAGTVGRGGEEGEQIGVENFGFHVVTCCGRLPQVNDWQ 160 (313)
T ss_pred CceeeeeehhhcccchhHHHHHHHHHHHHhhhhHHHHHHHHHhccccccCcccccccchhccceeeeeecccCcccccch
Confidence 899999999998888999999999999999 222110 239999999999999999999
Q ss_pred ccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccC
Q 020393 175 SNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYG 254 (326)
Q Consensus 175 ~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G 254 (326)
++|.+||...|+.++++.+.+.+.|.+..+++..+..+++.++.....-|+|+|||||.|||--|+.+.++|+|+.+++|
T Consensus 161 edW~eFf~rhRlq~Qldl~~~~~~Dre~~el~~~L~~kia~Lf~~~eI~PaLlHGDLW~GNva~D~~~ePiIfDPasfYg 240 (313)
T KOG3021|consen 161 EDWEEFFARHRLQPQLDLLEKTYGDREAFELWSILQTKIADLFKCLEILPALLHGDLWSGNVAEDGAGEPIIFDPASFYG 240 (313)
T ss_pred hhHHHHHHHHhhhHHHHHHHHhhccHHHHHHHHHHHHhhHHHhccceeehhhhccccccCcccccCCCCceEeCchhhcC
Confidence 99999999889999999988888888889999999999999998766789999999999998888778899999999999
Q ss_pred chhhhhhhhh-hcCCChHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHhc
Q 020393 255 HNEAEFGMSW-CAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK 325 (326)
Q Consensus 255 ~~~~Dla~~~-~~~~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (326)
|+++|+++.+ +++|++.|+++|.+..|..+++++|+.+|+|+++++||+.||++|+....+|++.|++.++
T Consensus 241 h~Efefgia~mfGgf~~sF~naY~k~ipka~G~eqR~~LYqLyhyLNHwNhFGs~YRs~sl~i~~n~lk~~~ 312 (313)
T KOG3021|consen 241 HSEFEFGIAKMFGGFTQSFYNAYHKKIPKAPGFEQRLLLYQLYHYLNHWNHFGSGYRSSSLDIMRNLLKNCY 312 (313)
T ss_pred CcHHHHHHHHHhCCCcHHHHHHHhhhcCCCCcHHHHHHHHHHHHHhhhhhhhccccccchhHHHHHHHHHhc
Confidence 9999999885 5889999999999999999999999999999999999999999999999999999999876
No 4
>PRK10593 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=287.84 Aligned_cols=276 Identities=18% Similarity=0.191 Sum_probs=216.1
Q ss_pred hhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecc
Q 020393 36 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGA 114 (326)
Q Consensus 36 ~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~ 114 (326)
+.|++-+.+. .+.++.+++++++|.++.+|++++.++++|+|..+.. ....+..|++.|++|++.+.+|||+|+..+.
T Consensus 2 ~~~~~~~~~~-~~~~~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~ 80 (297)
T PRK10593 2 EQLRAELSHL-LGEKLSRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMT 80 (297)
T ss_pred hHHHHHHHHH-hchhhheeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEec
Confidence 3456555555 4558999999999999999999988889999998653 4568999999999999876799999998654
Q ss_pred cC--CCceEEEEeeecCCCCC----------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHH
Q 020393 115 LP--TGGSYIIMEFIEFGSSR----------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA 182 (326)
Q Consensus 115 ~~--~~~~~~v~e~l~G~~~~----------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~ 182 (326)
.. .+..++|||+++|.+.. ....++++.|++||+... +|+ .|. ..+.|.++|..|+.
T Consensus 81 ~~~~~g~~~LVmE~i~G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~----~g~-----~g~--~~~~~~~~w~~f~~ 149 (297)
T PRK10593 81 HEQSPGPDVLLLERLRGVSVEAPARTPERWEQLKDQIVEGLLAWHRIDS----RGC-----VGA--VDSTQENLWPSWYQ 149 (297)
T ss_pred cCCcCCCeEEEEeccCCEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh----hhc-----ccC--CCCcccccHHHHHH
Confidence 32 46799999999997642 123556799999999753 443 222 23456778888885
Q ss_pred HhhhHHHH---HHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CC-eEEEccc-cccCch
Q 020393 183 EHRLGYQL---KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GE-PVILDPA-CYYGHN 256 (326)
Q Consensus 183 ~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~-~~iID~~-~~~G~~ 256 (326)
+++.... +.+..........+.+.++.+.+++.+...+.+++|||||||+|||+++++ +. ++|||+. +.+||+
T Consensus 150 -~rl~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~r 228 (297)
T PRK10593 150 -QRVEVLWTTLNQFNNTGLTMQDRRILFRTRECLPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAPR 228 (297)
T ss_pred -HHHHHHHhhhhhccccCCChhHHHHHHHHHHhchhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhCCCCH
Confidence 5665433 222222222233445555666677766654457899999999999999865 33 7999997 899999
Q ss_pred hhhhhhhhhcCCChHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHh
Q 020393 257 EAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRML 324 (326)
Q Consensus 257 ~~Dla~~~~~~~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (326)
++||+++.++++.++|+++|++..|++++|+.|..+|.||+.++|.++||+=+......+++.++.||
T Consensus 229 E~DLa~~~~~~f~~~f~~~Y~~~~pl~~g~~~R~~ly~Ly~~l~h~~~fG~~~~~~~~~~~~~~~~~~ 296 (297)
T PRK10593 229 EYELFRLMDNGLAEQLLWRYLQKAPVAESFIWRRWLYVLWDEVAQLVNTGRFDRRRFDLAAKSLLPWL 296 (297)
T ss_pred HHhHHHhhcCCccHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHhCccchhhHHHHHHHhcccc
Confidence 99999876678999999999999999999999999999999999999999999999999999998886
No 5
>PRK05231 homoserine kinase; Provisional
Probab=100.00 E-value=4.1e-31 Score=242.81 Aligned_cols=246 Identities=17% Similarity=0.211 Sum_probs=172.1
Q ss_pred cccccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCC
Q 020393 27 RRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRA 106 (326)
Q Consensus 27 ~~~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~v 106 (326)
|+|||+++.++++++|..++.+ ++.+++++.+|..|.+|+|++++|+||||+++......+..|.+++++|++. ++||
T Consensus 1 m~vyt~ls~~~l~~~l~~y~~~-~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~~~~~l~~~~~~l~~L~~~-glpv 78 (319)
T PRK05231 1 MAVYTDVSDDELAAFLAPYDLG-ELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERLTAEDLPFFLGLMQHLAAR-GVPV 78 (319)
T ss_pred CCccccCCHHHHHHHHHhcCCc-hhhccchhccccccceEEEEeCCCcEEEEEeccCChHHhHHHHHHHHHHHHC-CCCC
Confidence 8999999999999999777665 7999999999999999999999999999998632344556788999999886 6999
Q ss_pred cceeeecccC-----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccH
Q 020393 107 PRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNW 177 (326)
Q Consensus 107 P~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w 177 (326)
|+|+...... .+..+++++|++|.... ..++++|+.||+||....+ |..+..+..+ + ..|
T Consensus 79 P~~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---f~~~~~~~~~-------~-~~~ 147 (319)
T PRK05231 79 PAPVARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRD---FPLERPNLRG-------L-AWW 147 (319)
T ss_pred CcceeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhc---CCccCCCCCC-------h-HHH
Confidence 9999764332 46789999999998653 4578999999999998763 4322211110 0 112
Q ss_pred HHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcc-cccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCc
Q 020393 178 IEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP-LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH 255 (326)
Q Consensus 178 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~ 255 (326)
.+.+. ++.+.+.... ...+.+.++.+.+.+.. ... ..+.++||||+|++|||+++++..+|||| +|+.|+
T Consensus 148 ~~~~~--~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~--~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~ 219 (319)
T PRK05231 148 RELAP--RLLPFLADEQ----AALLEAELAAQLAFLASAAWP--ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACNDK 219 (319)
T ss_pred HHHHH--HHhhccChhH----HHHHHHHHHHHHHhhhccccc--cCCcccCCCCCCCCcEEEECCceEEEEecccccCCc
Confidence 22111 1111110000 01112223333333221 111 25779999999999999987766799998 689999
Q ss_pred hhhhhhhh---hhc----CCC----hHhHHHhhhhCCCCcCHHHHHHHH
Q 020393 256 NEAEFGMS---WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDLY 293 (326)
Q Consensus 256 ~~~Dla~~---~~~----~~~----~~fl~~Y~~~~~l~~~~~~r~~~y 293 (326)
+++|||.+ ++. .+. .+|++||++.+|+++...+.+..+
T Consensus 220 ~~~DlA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~E~~~l~~~ 268 (319)
T PRK05231 220 LLYDVAITLNDWCFEADGSLDATKARALLAAYQSVRPLTAAERAALPVM 268 (319)
T ss_pred hHHHHHHHHHHHHccCCCCcCHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 99999965 331 132 579999999999987554444443
No 6
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=99.97 E-value=3.7e-29 Score=228.68 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=175.9
Q ss_pred cccccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCC
Q 020393 27 RRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIR 105 (326)
Q Consensus 27 ~~~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~ 105 (326)
|+|||.++.++|.++|.+++++ .+.+++++.+|..|.+|++++++++||+|++... ....+..|.+++++|++. ++|
T Consensus 1 ~~~~~~~~~~~l~~~l~~y~~~-~~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~-g~p 78 (307)
T TIGR00938 1 MAVYTSVSDEEMSSFLDGYDLG-ELLSLKGIAEGVENSNYLLTTDVGRYILTLYEKRVKAEELPFFLALTTHLAAR-GLP 78 (307)
T ss_pred CCccccCCHHHHHHHHHhcCCC-CceeccccCCccccceEEEEeCCCcEEEEEecCCCCHHHHHHHHHHHHHHHHC-CCC
Confidence 8999999999999999988765 6899999999999999999999999999998652 234567889999999886 689
Q ss_pred CcceeeecccC-----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCcc
Q 020393 106 APRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN 176 (326)
Q Consensus 106 vP~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~ 176 (326)
||+++...... .+..+++++|++|.... ..++++|+.||+||..... |..+... ..+...
T Consensus 79 vp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---~~~~~~~--------~~~~~~ 147 (307)
T TIGR00938 79 VPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAH---FPENRKN--------SLRLEA 147 (307)
T ss_pred CCccccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc---CCCCCCC--------CCChHH
Confidence 99999865432 46789999999998753 4578999999999998753 4322110 012234
Q ss_pred HHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCc
Q 020393 177 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH 255 (326)
Q Consensus 177 w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~ 255 (326)
|...+... . ..+. .......+.+++.++.+...... ..+.++||||+|++|+++++++..+|||| ++.+|+
T Consensus 148 w~~~~~~~-~-~~~~-----~l~~~~~~~l~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~ 219 (307)
T TIGR00938 148 WHILAEKC-F-EAAP-----QLEAHMGAELDKELDYLDKFWPR-DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACTDA 219 (307)
T ss_pred HHHHHHhh-h-hccc-----ccCHHHHHHHHHHHHHHHhhhhh-cCCCccCCCCCCcCcEEEECCceEEEeecccccCcc
Confidence 54433211 0 0000 01111122233333333222221 35789999999999999998876799998 689999
Q ss_pred hhhhhhhh---hh----cCCC----hHhHHHhhhhCCCCcCHHHHHHHH
Q 020393 256 NEAEFGMS---WC----AGFG----GSFYNSYFEVMPKQPGFEKRRDLY 293 (326)
Q Consensus 256 ~~~Dla~~---~~----~~~~----~~fl~~Y~~~~~l~~~~~~r~~~y 293 (326)
+++|||.+ ++ ..+. .+|++||++..|+++.+.+.+...
T Consensus 220 ~~~DLA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~e~~~l~~~ 268 (307)
T TIGR00938 220 RAYDLAITVNAWCFDADDHFDADHAKALIKGYHQSRPLTEEEKAAFPVL 268 (307)
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 99999965 22 1233 689999999999997665555544
No 7
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=99.96 E-value=4.5e-27 Score=213.74 Aligned_cols=236 Identities=15% Similarity=0.180 Sum_probs=167.2
Q ss_pred hhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc
Q 020393 36 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL 115 (326)
Q Consensus 36 ~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~ 115 (326)
+++..++.+++++ ++.+++++.+|..|.+|++.+++++||+|+++......+..|.+++++|.+. ++|||+++.....
T Consensus 2 ~~l~~~l~~y~~~-~~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~-g~~vp~~i~~~~g 79 (296)
T cd05153 2 EELASFLADYDLG-ELLSFEGISAGIENTNYFVTTDSGRYVLTLFEKVSAEELPFFLALLDHLAER-GLPVPRPIADRDG 79 (296)
T ss_pred HHHHHHHHHcCCC-chhheecccCccccceEEEEeCCCcEEEEEcCCCChHhccHHHHHHHHHHHC-CCCCCccccCCCC
Confidence 6788999998766 7899999999999999999999899999998754445577899999999886 6899999986543
Q ss_pred C-----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhh
Q 020393 116 P-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRL 186 (326)
Q Consensus 116 ~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l 186 (326)
. ++..++|++|++|.++. ....++|+.||+||..... |....+. .....|...... +.
T Consensus 80 ~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~---~~~~~~~---------~~~~~~~~~~~~-~~ 146 (296)
T cd05153 80 EYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQS---FPGERNN---------LRGLAWIRELGK-DL 146 (296)
T ss_pred cEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc---CCccCCC---------cCCcHHHHHHHH-Hh
Confidence 1 46789999999998763 3578999999999998753 3211110 011233322111 01
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh--
Q 020393 187 GYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS-- 263 (326)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~-- 263 (326)
.+ .........+++.++.+...... ..+.++||||+|++|||+++++.++|||| .+.+|++++||+.+
T Consensus 147 ~~--------~l~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~~~~Dla~~~~ 217 (296)
T cd05153 147 LP--------LLSAEDRALLADELARQDAFDPS-DLPRGVIHADLFRDNVLFDGDELSGVIDFYFACTDAFLYDLAITLN 217 (296)
T ss_pred cc--------ccCHHHHHHHHHHHHHHHhhhhh-cCCCcCCccCcCcccEEEeCCceEEEeehhhhcCchHHHHHHHHHH
Confidence 00 01122233444444443332111 35679999999999999998776799997 68999999999965
Q ss_pred -hhc----CCC----hHhHHHhhhhCCCCcCHHHHHHHHHH
Q 020393 264 -WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDLYML 295 (326)
Q Consensus 264 -~~~----~~~----~~fl~~Y~~~~~l~~~~~~r~~~y~l 295 (326)
++. ++. ++|+++|++..|++++....+..+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~gY~~~~~ls~~e~~~l~~~~~ 258 (296)
T cd05153 218 DWCFDEDGALDPERAQALLAGYQAVRPLTEAERAALPIMLR 258 (296)
T ss_pred HHHhCccCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 221 122 57999999999998765555555543
No 8
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=99.95 E-value=4.9e-27 Score=213.82 Aligned_cols=246 Identities=19% Similarity=0.190 Sum_probs=175.1
Q ss_pred cccccccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCC
Q 020393 25 SKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRT 103 (326)
Q Consensus 25 ~~~~~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~ 103 (326)
..|++|+++..+++...|.+.++| ...++.++.. ..|.+|++++++|+||||++++. +...+..|.+++++|++. +
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~g-~~~~~~~l~s-~eN~~f~~~~~~g~~iLki~~~~~~~~~i~~el~~l~~La~~-~ 79 (331)
T COG2334 3 DSMAVFTPLTSDEAAAALEAYHYG-LDGSLRGLNS-EENSNFRVQTEDGRYILKIYRPGWTRAEIPFELALLQHLAER-G 79 (331)
T ss_pred cccccccCcChHHHHHHHHhcCcC-cccccccccc-ccCceEEEEecCCCeEEEEecCCCCHHHHHHHHHHHHHHHHc-C
Confidence 358999999999999999998777 4567777865 89999999999999999999874 567788999999999987 6
Q ss_pred CCCcceeeecccC-----CC--ceEEEEeeecCCCCC-----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCC
Q 020393 104 IRAPRPFKVGALP-----TG--GSYIIMEFIEFGSSR-----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQIN 171 (326)
Q Consensus 104 ~~vP~~~~~~~~~-----~~--~~~~v~e~l~G~~~~-----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~ 171 (326)
++||.|+...+.. .+ ..+.+++|++|..+. .+++.+|+.||+||..... |.+..++..+ ..
T Consensus 80 i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~---f~~~~p~~~~----~~ 152 (331)
T COG2334 80 IPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRG---FPFERPNALR----RL 152 (331)
T ss_pred CCCCCCccCCCcchhhhccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCc---CCccCCCccc----cc
Confidence 8888886554332 46 899999999998764 4679999999999999974 5443443321 11
Q ss_pred CCCccHHHHHHHhhhHHHHHHHHhhcCCh----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCC-CeEE
Q 020393 172 KWTSNWIEFYAEHRLGYQLKLALDQYGDS----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVI 246 (326)
Q Consensus 172 ~~~~~w~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-~~~i 246 (326)
.| .- ...+..... ....+. .....++++.+.++..++. ....+||||+|++||++++++ .+++
T Consensus 153 ~w----~~--~~~~~~~~~----~~~~~~~l~a~~~~~~~~~~~~~~~~lp~--~~~~iIH~D~~~~NVl~d~~~~~~g~ 220 (331)
T COG2334 153 EW----DI--LEPRALLRL----DLVEPEDLRAALLAALDRLLARLPAHLPA--LGDQIIHGDLHPDNVLFDDDTDVSGF 220 (331)
T ss_pred ch----hh--hcchhhhhh----cccCchhhHHHHHHHHHHHHhhchhhCCc--ccceeeecCCCccceeEcCCCCeeeE
Confidence 22 20 000000000 000111 1233444444444444332 123499999999999999887 4899
Q ss_pred Ecc-ccccCchhhhhhhhh---hcC--C----ChHhHHHhhhhCCCCcCHHHHHHH
Q 020393 247 LDP-ACYYGHNEAEFGMSW---CAG--F----GGSFYNSYFEVMPKQPGFEKRRDL 292 (326)
Q Consensus 247 ID~-~~~~G~~~~Dla~~~---~~~--~----~~~fl~~Y~~~~~l~~~~~~r~~~ 292 (326)
||| +|++|+.++||+++. ... . -.+|++||++.+|+++...+-+..
T Consensus 221 iDFdDa~~~~~i~DlAi~l~~~~~d~~~~~~~~~a~l~GY~~v~pl~~~El~~Lp~ 276 (331)
T COG2334 221 IDFDDAGYGWFIYDLAIALNAWNGDEADPRAAIAAFLEGYEEVRPLTAAELELLPD 276 (331)
T ss_pred EEccccccchHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 998 699999999999863 211 1 158999999999998755444443
No 9
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=99.92 E-value=2.1e-23 Score=185.84 Aligned_cols=230 Identities=16% Similarity=0.121 Sum_probs=148.7
Q ss_pred eEeCCccccceEEEEeCCccEEEEecCCCCcc---hHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393 55 CPVGGGCINLASRYGTDAGSFFVKTNRSIGPS---MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 131 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~---~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 131 (326)
.++.+|.+|.+|++++++++||+|+++..... ..+.|.++++.+++. ++ +|+++..+. .++||+|++|.+
T Consensus 2 ~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~-g~-~P~~i~~~~-----~~~v~e~i~G~~ 74 (256)
T TIGR02721 2 QTLSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSAL-GL-APKPILVNE-----HWLLVEWLEGEV 74 (256)
T ss_pred CcCCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhc-CC-CCceEEEeC-----CEEEEEeccCcc
Confidence 56789999999999988779999998753221 357899999999876 44 899998763 479999999987
Q ss_pred CC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 020393 132 SR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ 204 (326)
Q Consensus 132 ~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~ 204 (326)
+. ....++++.|++||+.+.. +.+. +.. .++..++.........+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~----~~~~---------------~~~-----~~~~~~~~~l~~~~~~~~--- 127 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRF----GYPL---------------SLK-----ARIAHYWLQIDPARRTPE--- 127 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCC----CCCC---------------CHH-----HHHHHHHHhcccccCChH---
Confidence 53 3478999999999998752 1110 000 011111111111111222
Q ss_pred HHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhhc-C--CChHhHHHhhhhC
Q 020393 205 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWCA-G--FGGSFYNSYFEVM 280 (326)
Q Consensus 205 ~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~~-~--~~~~fl~~Y~~~~ 280 (326)
+.++.+.+.........++++||||++++|||+++++ .+|||| .+.+|||.+|||.++.. + ..+.|+++|.+..
T Consensus 128 -~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp~~DLa~~~~~~~~~~~~~~l~~Y~~~~ 205 (256)
T TIGR02721 128 -WLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIALELAAIIRANDEEQQQDFVQRYCQRR 205 (256)
T ss_pred -HHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCCC-CEEEeccccCcCCHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 2222222221111113578999999999999998876 789997 69999999999976432 1 2357999999886
Q ss_pred CCC--cCHHHHHHHHHHHHHHHHHHHh--------ccCcHHHHHHHHHHH
Q 020393 281 PKQ--PGFEKRRDLYMLYHYLNHYNLF--------GSGYRSSALSIIDDY 320 (326)
Q Consensus 281 ~l~--~~~~~r~~~y~l~~~l~~~~~~--------~~~~~~~~~~~~~~~ 320 (326)
+.. +.+..++..|..+..+....++ ...|...+..+.+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~a~~~~~~~ 255 (256)
T TIGR02721 206 RIYSISVLWRQVKAWQPWVDYMAALWFELRWQQTGDPQFLELAQELRHRL 255 (256)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhh
Confidence 542 3555566555433333232222 245776666655543
No 10
>PRK11768 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=9.1e-24 Score=194.26 Aligned_cols=247 Identities=17% Similarity=0.145 Sum_probs=162.7
Q ss_pred ccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCC
Q 020393 30 FATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRA 106 (326)
Q Consensus 30 ~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~v 106 (326)
|..++.+.|.+.+...|+. ....+..++ |..|.||+|+++++ +||+|++++. +...+..|.+++.+|++. ++||
T Consensus 8 ~~~l~p~~~~~a~~~~g~~-~~~~~~~l~-s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~-gipv 84 (325)
T PRK11768 8 FQTLTPDLILDALESLGLR-VDGRLLALN-SYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAEA-EIPV 84 (325)
T ss_pred CCCCChHHHHHHHHHcCCC-CccceEeec-cccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC-CCCC
Confidence 5568899999999888552 224456664 68899999999766 7999998753 345677899999999986 6888
Q ss_pred cceeeecc-cC---CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHH
Q 020393 107 PRPFKVGA-LP---TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWI 178 (326)
Q Consensus 107 P~~~~~~~-~~---~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~ 178 (326)
|.|+..+. +. ++..+.+++|++|.... .+.+++|+.||+||..+.. +++... ..| ++.
T Consensus 85 ~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~~~~~~~~~~~lG~~LarlH~~~~~---~~~~~r---------~~~--~~~ 150 (325)
T PRK11768 85 VAPLAFNGQTLHEHQGFRFALFPRRGGRAPELDNLDQLEWVGRFLGRIHQVGAK---RPFEHR---------PTL--DLQ 150 (325)
T ss_pred CCCccCCCCEEEEECCEEEEEEeeeCCCCCCCCCHHHHHHHHHHHHHHHhhccC---CCCCCC---------CcC--CHH
Confidence 88853221 10 47789999999998753 4579999999999998863 222110 011 111
Q ss_pred HHHHHhhhHHHHHHHHhhcCChH----HHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-cccc
Q 020393 179 EFYAEHRLGYQLKLALDQYGDST----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYY 253 (326)
Q Consensus 179 ~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~ 253 (326)
.+. .. ....+.. ....++. ..+.++++.+.+.+.+...+.+.++||||+|++|||++ + ..+|||| +|+.
T Consensus 151 ~~~-~~-~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 151 EYG-IE-PRDWLLA--SDLIPSDLRPAYLAAADQLLAAVEACWARGDVRLLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred HHH-HH-HHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 111 00 0000100 0111111 22344444443333332213577899999999999995 4 4899998 6899
Q ss_pred CchhhhhhhhhhcC------CChHhHHHhhhhCCCCcCHHHHHHHHHHHHHH
Q 020393 254 GHNEAEFGMSWCAG------FGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYL 299 (326)
Q Consensus 254 G~~~~Dla~~~~~~------~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l 299 (326)
|++++||+++.... .-.+|++||++.+++++.+...+..+..++.+
T Consensus 225 g~~i~DLa~~l~~~~~~~~~~~~~~l~GY~~~r~l~~~e~~~l~~l~~lR~~ 276 (325)
T PRK11768 225 GPAVQDLWMLLSGDRAEQLMQLETLLEGYEEFCEFDPRELALIEPLRALRLI 276 (325)
T ss_pred CCHHHHHHHHhccCcchhHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence 99999999764321 12479999999999997766666655444433
No 11
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=99.90 E-value=6.2e-23 Score=180.48 Aligned_cols=215 Identities=16% Similarity=0.127 Sum_probs=135.9
Q ss_pred EeEeC-CccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCC--CceEEEEeeecC
Q 020393 54 ICPVG-GGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYIIMEFIEF 129 (326)
Q Consensus 54 v~~l~-~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~--~~~~~v~e~l~G 129 (326)
|+++. +|..|.+|++. +.||+|+++.. ....++.|.+++++|.+..++++|+++..+...+ +..|++|++++|
T Consensus 2 ~~~~~~gG~~n~vy~~~---~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G 78 (235)
T cd05155 2 IEPVDSGGTDNATFRLG---DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEG 78 (235)
T ss_pred ceeccCCCcccceEEcC---CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecC
Confidence 46665 77888999983 47999998763 2346889999999998766799999998765432 356999999999
Q ss_pred CCCC--------CcHHHHHHHHHHHhhcCCCCC-CCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCCh
Q 020393 130 GSSR--------GNQSVFGKKLAEMHKAGKSSK-GFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 200 (326)
Q Consensus 130 ~~~~--------~~~~~lg~~La~lH~~~~~~~-~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~ 200 (326)
.++. ...+++|+.|++||+.+.+.. ..+.. .... ......|.+... ..+..... ..+.
T Consensus 79 ~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~-----~~~~~~~~-~l~~ 145 (235)
T cd05155 79 ETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRH--NFLR-----GGDLAVRDAETR-----EAIEALEG-VIDV 145 (235)
T ss_pred CCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCc--cccC-----CCChhHhhHHHH-----HHHHHccc-ccCh
Confidence 8763 235789999999999886421 11110 0000 000112221110 00000000 0111
Q ss_pred HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhh---cCCChHhHHHh
Q 020393 201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWC---AGFGGSFYNSY 276 (326)
Q Consensus 201 ~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~---~~~~~~fl~~Y 276 (326)
+.+.++.+...+... ..+++|||||||++|||+++++.++|||| ++.+|||++||+.++. ....+.|++.|
T Consensus 146 ---~~~~~~~~~~~~~~~--~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~~Dla~~~~~~~~~~~~~~~~~y 220 (235)
T cd05155 146 ---DAARALWEAALRAPW--WGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPACDLAIAWTLLDEDSRAAFRAAL 220 (235)
T ss_pred ---HHHHHHHHHHhcccc--cCCceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChHHHHHHHHhcCCHHHHHHHHHHc
Confidence 122222222222222 36789999999999999987777899998 5899999999997643 12236799999
Q ss_pred hhhCCCCcCHHHHHHHH
Q 020393 277 FEVMPKQPGFEKRRDLY 293 (326)
Q Consensus 277 ~~~~~l~~~~~~r~~~y 293 (326)
+ ..+ + -.+|..+|
T Consensus 221 ~-~~~--~-~~~~~~~~ 233 (235)
T cd05155 221 G-VDD--A-TWARGRGW 233 (235)
T ss_pred C-CCH--H-HHHHhccc
Confidence 8 333 2 24555554
No 12
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.89 E-value=7.9e-22 Score=174.34 Aligned_cols=217 Identities=15% Similarity=0.118 Sum_probs=140.2
Q ss_pred EeEeCCccc-cceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 54 ICPVGGGCI-NLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 54 v~~l~~G~~-n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
.+++..|.+ |.+|+++.+++++|+|+.+..+...+..|++++++|++. +++|+++..+.. .+..++||++++|.++
T Consensus 3 ~~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~--~~vP~v~~~~~~-~~~~~lv~e~i~G~~l 79 (244)
T cd05150 3 WERVTEGQSGATVYRLDGKNPGLYLKIAPSGPTYELEREAERLRWLAGK--LPVPEVIDYGSD-DGRAWLLTSAVPGVPA 79 (244)
T ss_pred ceecCCCCCcCeEEEEcCCCCcEEEEecCCCcccchHHHHHHHHHHHhc--CCCCeEEEEEec-CCccEEEEEeeCCccH
Confidence 467777764 899999987789999999764345578899999999976 899999987754 3678999999999875
Q ss_pred C---------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHH-Hh-hcCChH
Q 020393 133 R---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA-LD-QYGDST 201 (326)
Q Consensus 133 ~---------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~-~~-~~~~~~ 201 (326)
. ....++|+.|++||+.+... +.+.. + +.+.... ....++.. .. ...+..
T Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~--~~~~~------------~---~~~~~~~--~~~~~~~~~~~~~~~~~~ 140 (244)
T cd05150 80 AALWEELEPERLVDALAEALRRLHALPVAD--CPFDR------------R---LDRRLAE--ARARVENGLVDEDDFDDE 140 (244)
T ss_pred hHhhcccCHHHHHHHHHHHHHHHhcCCccc--CCcch------------h---HHHHHHH--HHHHHhcCCcChhhCcHh
Confidence 3 23688999999999986521 11100 0 0000000 00000000 00 000100
Q ss_pred H-HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh-h--c-----CCChH
Q 020393 202 I-YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW-C--A-----GFGGS 271 (326)
Q Consensus 202 ~-~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~-~--~-----~~~~~ 271 (326)
. ....+.+.+.+...... ..+++|||||+|++|||+++++.++|||| .+.+|||++||+.+. . . +..++
T Consensus 141 ~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~~Dla~~~~~~~~~~~~~~~~~~ 219 (244)
T cd05150 141 RRGWSAEELYAELEATRPA-EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRYQDLALAVRSLRENLGGEEYAAR 219 (244)
T ss_pred hcCCCHHHHHHHHHhhCCC-cCceEEECCCCCCccEEEeCCcEEEEEEccccccccHHHHHHHHHHHhhhhcCChHHHHH
Confidence 0 00122222222221111 35789999999999999998777899998 578999999999753 1 1 12368
Q ss_pred hHHHhhhhCCCCcCHHHHHHHHHHHH
Q 020393 272 FYNSYFEVMPKQPGFEKRRDLYMLYH 297 (326)
Q Consensus 272 fl~~Y~~~~~l~~~~~~r~~~y~l~~ 297 (326)
|+++|+... . + .+|+.+|.++.
T Consensus 220 f~~~Y~~~~-~--~-~~~~~~~~~~~ 241 (244)
T cd05150 220 FLDRYGIDA-P--D-PEKLAYYRLLD 241 (244)
T ss_pred HHHHcCCCC-C--C-HHHHHHHHHHh
Confidence 999997631 1 2 57888887653
No 13
>PLN02876 acyl-CoA dehydrogenase
Probab=99.89 E-value=1.3e-21 Score=200.04 Aligned_cols=250 Identities=16% Similarity=0.224 Sum_probs=158.0
Q ss_pred CCCchhHHHHHHhcCCCc--c--eeeEeEeCCccccceEEEEeCCc----cEEEEecCCC----CcchHHHHHHHHHHHH
Q 020393 32 TLSDDPIREWILSEGKAT--H--ITKICPVGGGCINLASRYGTDAG----SFFVKTNRSI----GPSMFEGEALGLGAMY 99 (326)
Q Consensus 32 ~~~~~~i~~~l~~~~~~~--~--v~~v~~l~~G~~n~~y~v~~~~~----~~vlK~~~~~----~~~~~~~E~~~l~~L~ 99 (326)
.++.+.+.+||.+..++. + ..+++++++|.+|.+|+|+..++ +||+|..+.. ....+..|+++++.|.
T Consensus 17 ~~d~~~l~~~l~~~~~~~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~ 96 (822)
T PLN02876 17 RFDEDALLRYAAANVAGFPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALG 96 (822)
T ss_pred cCCHHHHHHHHHHhCCCcCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHh
Confidence 478899999999763332 2 35899999999999999987653 7999998652 2245789999999998
Q ss_pred hcCCCCCcceeeecccC--CCceEEEEeeecCCCCC-------------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcc
Q 020393 100 ETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTI 164 (326)
Q Consensus 100 ~~~~~~vP~~~~~~~~~--~~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~ 164 (326)
++.++|||+++....+. .|..|+||||++|.... ..+.++++.|++||+..... .|+...
T Consensus 97 ~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~--~gl~~~--- 171 (822)
T PLN02876 97 EHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDA--IGLGKY--- 171 (822)
T ss_pred hcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchh--cChhhc---
Confidence 65679999999875432 36899999999998531 13567999999999987632 222110
Q ss_pred cccccCCCC----CccHHHHHHHhhhHHHHHHHHh--hcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeee
Q 020393 165 GSTPQINKW----TSNWIEFYAEHRLGYQLKLALD--QYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISS 238 (326)
Q Consensus 165 ~~~~~~~~~----~~~w~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~ 238 (326)
|. ...+ ...|...+. ..... ....+.+.+.++.+.+.++.... ...+++||||||+++|||+
T Consensus 172 g~---~~~~~~~~l~~w~~~~~--------~~~~~~~~~~~~~~~~l~~wL~~~~P~~~~-~~~~~~LvHGD~~~~Nvl~ 239 (822)
T PLN02876 172 GR---RDNYCKRQVERWAKQYL--------ASTGEGKPPRNPKMLELIDWLRENIPAEDS-TGAGTGIVHGDFRIDNLVF 239 (822)
T ss_pred CC---CCchHHHHHHHHHHHHH--------HhhcccCCCCChhHHHHHHHHHhcCCCccc-cCCCcceEecCcccccEEE
Confidence 10 0001 111221111 00000 00112222333333333332110 0125799999999999999
Q ss_pred cCC--CCeEEEcc-ccccCchhhhhhhh---hh-c-------------------CCC--hHhHHHhhhhCCCCcCHHHHH
Q 020393 239 DKN--GEPVILDP-ACYYGHNEAEFGMS---WC-A-------------------GFG--GSFYNSYFEVMPKQPGFEKRR 290 (326)
Q Consensus 239 ~~~--~~~~iID~-~~~~G~~~~Dla~~---~~-~-------------------~~~--~~fl~~Y~~~~~l~~~~~~r~ 290 (326)
+++ +..+|||| .+.+|||..||+.+ ++ . |++ +++++.|++....+.. ...+
T Consensus 240 ~~~~~~v~aVLDWE~a~~GdPl~DLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~e~~~~Y~~~~g~~~~-~~~~ 318 (822)
T PLN02876 240 HPTEDRVIGILDWELSTLGNQMCDVAYSCLPYIVDINLDNQQVGKGFEFTGIPEGIPSLPEYLAEYCSASGKPWP-AANW 318 (822)
T ss_pred cCCCCeEEEEEeeeccccCChHHHHHHHhhhccccccCCccccccccccCcCCCCCCCHHHHHHHHHHHhCCCCC-Cccc
Confidence 863 34699998 58999999999964 21 1 121 5799999998653210 1223
Q ss_pred HHHHHHHHH
Q 020393 291 DLYMLYHYL 299 (326)
Q Consensus 291 ~~y~l~~~l 299 (326)
.+|..+..+
T Consensus 319 ~~~~~~~~~ 327 (822)
T PLN02876 319 KFYVAFSLF 327 (822)
T ss_pred HHHHHHHHH
Confidence 455544443
No 14
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=99.89 E-value=3e-21 Score=179.95 Aligned_cols=223 Identities=19% Similarity=0.248 Sum_probs=144.3
Q ss_pred cccccCCCchhHHHHHH-hcCC--CcceeeEeEeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHH
Q 020393 27 RRTFATLSDDPIREWIL-SEGK--ATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGE 91 (326)
Q Consensus 27 ~~~~~~~~~~~i~~~l~-~~~~--~~~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E 91 (326)
|+-|-+|+.+.+.++|. +.+. .....+++++++|..|.+|+|+.++| ++|||..++. ..+....|
T Consensus 1 ~~~y~~l~~~~v~~yl~~~~~~~~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~E 80 (401)
T PRK09550 1 MSGYETLTEEDAVEYAALKLGLFDPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIE 80 (401)
T ss_pred CCCCeeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHH
Confidence 45577899999999994 4342 22456889999999999999999877 8999997631 22446789
Q ss_pred HHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC-----------CCcHHHHHHHHHHHhhcCCCCCCCCCCC
Q 020393 92 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDV 160 (326)
Q Consensus 92 ~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~fg~~~ 160 (326)
++.|+.+.+..+..||+++..+. +..++||||+++... +..++++|+.||++|-.... +....
T Consensus 81 ae~L~~l~~~~p~~VPkV~~~D~---~~~~lVME~L~~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd---~~~~~ 154 (401)
T PRK09550 81 AEALKIQAKYVPDLVPKVYHYDE---ELAVTVMEDLSDHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSD---FGLSS 154 (401)
T ss_pred HHHHHHHHhhCCCCCCeEEEECC---CCCEEEEecCCCccHHHHHHhcCCccHHHHHHHHHHHHHHHhccch---hhcCh
Confidence 99999998877788999999984 578999999997541 24579999999999954432 11100
Q ss_pred CCcccccc-cCCC----------CCccHHHHHHHhhhHHHHHHHHhh-cCChHHHHHHHHHHHHhcccccCCCCCcceee
Q 020393 161 DNTIGSTP-QINK----------WTSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLH 228 (326)
Q Consensus 161 ~~~~~~~~-~~~~----------~~~~w~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiH 228 (326)
........ ..|. ......+.. .+++.+.+....+. ..+..+...+.++... +. ..+.+|||
T Consensus 155 ~~~~~~~~~f~N~~l~~ite~lvft~P~~~~~-~n~~~p~l~~~~~~l~~d~~L~~~~~~L~~~----~~--~~~~~l~H 227 (401)
T PRK09550 155 EEKKALVAKFTNPELCKITEDLVFTDPYFDHE-TNNFEPELEPEVEELRADKELKLEVAKLKHK----FL--TKAEALLH 227 (401)
T ss_pred hhhhhHHhhcCCHHHhhhhHhhccccchhhhh-hccCChhhHHHHHHHHhCHHHHHHHHHHHHH----Hh--cCCCceee
Confidence 00000000 0010 000000000 01233333322211 1233333333333332 22 35678999
Q ss_pred cCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393 229 GDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS 263 (326)
Q Consensus 229 gDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~ 263 (326)
||||++||++.+++ +.|||+ .|.+|+|.+||+.+
T Consensus 228 gDl~~gni~~~~~~-~~viD~E~a~~G~~~~Dlg~~ 262 (401)
T PRK09550 228 GDLHTGSIFVTEEE-TKVIDPEFAFYGPIGFDIGTF 262 (401)
T ss_pred ccCCcccEEeeCCC-cEEEeccccccCChHHHHHHH
Confidence 99999999997764 899997 58999999999975
No 15
>PLN02756 S-methyl-5-thioribose kinase
Probab=99.89 E-value=2.4e-21 Score=179.64 Aligned_cols=223 Identities=17% Similarity=0.171 Sum_probs=141.3
Q ss_pred cccCCCchhHHHHHHhc------CCC-cceeeEeEeCCccccceEEEEeCCccEEEEecCCC----------CcchHHHH
Q 020393 29 TFATLSDDPIREWILSE------GKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----------GPSMFEGE 91 (326)
Q Consensus 29 ~~~~~~~~~i~~~l~~~------~~~-~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~----------~~~~~~~E 91 (326)
.|.+++.+.+.+|+.+. ..+ ..+.+++++++|.+|.+|+|+++++++|||.+++. +......|
T Consensus 5 ~y~~l~~~~l~~yl~~~~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~E 84 (418)
T PLN02756 5 EFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFE 84 (418)
T ss_pred ccccCCHHHHHHHHHHccchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHH
Confidence 46788999999999886 222 24678999999999999999988789999999731 22334567
Q ss_pred HHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC--C----------CCcHHHHHHHHHHHhhcCCCCCCCCCC
Q 020393 92 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS--S----------RGNQSVFGKKLAEMHKAGKSSKGFGFD 159 (326)
Q Consensus 92 ~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~--~----------~~~~~~lg~~La~lH~~~~~~~~fg~~ 159 (326)
.+.|+.+.+..+++||+++..+. +..+++|||++|.. + +...+++|..|++..-..+. |+..
T Consensus 85 a~aL~~~~~~~p~~VPkVy~~de---d~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd---~~~~ 158 (418)
T PLN02756 85 ATALREHGRLCPDHVPEVYHFDR---TMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSL---LYHD 158 (418)
T ss_pred HHHHHHhhhcCCCCCCeEEEECC---CCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcch---hccC
Confidence 88888887767789999999984 57899999998832 2 13468899999987222221 1110
Q ss_pred CCCccccccc-C-CC----------CCccHHHHHHHhhhHHHHHHHHhhc-CChHHHHHHHHHHHHhcccccCCCCCcce
Q 020393 160 VDNTIGSTPQ-I-NK----------WTSNWIEFYAEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCL 226 (326)
Q Consensus 160 ~~~~~~~~~~-~-~~----------~~~~w~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~~~~~~L 226 (326)
.......... . |. ..+.+.+.-.+....+.+....+.. .++.++..+.++..+ +- ...++|
T Consensus 159 ~~~kk~~~~~f~~N~elc~itEdlvFt~Py~~~~~n~~~~p~l~~~~~~l~~d~~L~~~v~~Lk~~----f~--~~~~~L 232 (418)
T PLN02756 159 TTEHKRAVAEFCGNVELCRLTEQVVFSDPYKVSQYNRWTSPYLDRDAEAVREDNILKLEIAELKSM----FC--ERAQAL 232 (418)
T ss_pred hhhhhHHHHHhcCCHHHHHHHHhheeccccccchhcCCCCcchHHHHHHHhcCHHHHHHHHHHHHH----HH--hcccce
Confidence 0000000000 0 00 0000000000011112222222111 244444444444333 22 367899
Q ss_pred eecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh
Q 020393 227 LHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW 264 (326)
Q Consensus 227 iHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~ 264 (326)
+|||||+|||++.+++ +.+||+ .+++||+++||+++.
T Consensus 233 ~HGDl~~g~i~~~~~~-~~~id~ef~~~g~~~~d~g~~~ 270 (418)
T PLN02756 233 VHGDLHTGSVMVTPDS-TQVIDPEFAFYGPMGFDIGAFL 270 (418)
T ss_pred eecCCCCCcEEEcCCC-ceEecchhhccCchHHhHHHHH
Confidence 9999999999998776 899997 589999999999853
No 16
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.88 E-value=9.6e-22 Score=171.50 Aligned_cols=191 Identities=15% Similarity=0.158 Sum_probs=129.3
Q ss_pred eeEeEeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 52 TKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
.+.+++++|.+|.+|+. .++++|+|+++... ...++.|+++++.+.+. ++|||+|+..+.. .+...++|+|++|.
T Consensus 4 ~~~~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~-glpvP~~~~~~~~-~~~~glv~e~i~G~ 79 (226)
T TIGR02172 4 SDWTQTGEGGNGESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSL-GIPTPHPFDLVED-GGRLGLIYELIVGK 79 (226)
T ss_pred hHheeecCCCCcceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHc-CCCCCceEEEEec-CCeeeeeeeecCCc
Confidence 45688999999999984 35689999998632 34578899999999975 7999999988654 34567899999997
Q ss_pred C-----CC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcC
Q 020393 131 S-----SR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG 198 (326)
Q Consensus 131 ~-----~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~ 198 (326)
+ +. .....+|+.+++||+.+.+. .++ + ..+ .++...++... ..
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~--~~l---------~------~~~------~~~~~~l~~~~--~~ 134 (226)
T TIGR02172 80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDT--STF---------Q------SYK------EKIRKFIEEKD--FV 134 (226)
T ss_pred cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCC--CcH---------H------HHH------HHHHHHHHhcc--CC
Confidence 4 11 23577888888999876531 111 0 000 01111111110 11
Q ss_pred ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhh-c----CCChHh
Q 020393 199 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWC-A----GFGGSF 272 (326)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~-~----~~~~~f 272 (326)
+....+.+..+++. + +.++++||||+|++||++++++ .+|||| ++.+|||.+||+.++. . .+...|
T Consensus 135 ~~~~~~~l~~~l~~----~---~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gdp~~Dla~~~~~~~~~~~~~~~~ 206 (226)
T TIGR02172 135 PKDYKEKARAFIKE----V---PDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGYGNPLFDLGLLFMFCHYLDDDKLQA 206 (226)
T ss_pred CHHHHHHHHHHHHh----C---CCCCceEecCCCCCcEEEcCCC-cEEEechhcCcCCHHHHHHHHHHhccCChhHHHHH
Confidence 21223333333322 1 3456889999999999998877 999997 5899999999997642 2 233567
Q ss_pred HHHhhhh
Q 020393 273 YNSYFEV 279 (326)
Q Consensus 273 l~~Y~~~ 279 (326)
+..|+..
T Consensus 207 ~~~y~~~ 213 (226)
T TIGR02172 207 IFHMNAE 213 (226)
T ss_pred HHhcCHH
Confidence 8888853
No 17
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=99.88 E-value=5e-21 Score=171.84 Aligned_cols=214 Identities=13% Similarity=0.111 Sum_probs=137.7
Q ss_pred HhcCCCcceeeEeEeCCccccceEEEEeC-CccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393 43 LSEGKATHITKICPVGGGCINLASRYGTD-AGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 120 (326)
Q Consensus 43 ~~~~~~~~v~~v~~l~~G~~n~~y~v~~~-~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 120 (326)
.+.|+...+.++...+.|..|.+|+|... +.+||+|+.+... ...++.|.++++.|..+.++|+|+++..+ ..
T Consensus 5 ~~~~~~~~~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~-----~~ 79 (276)
T cd05152 5 RKHGLTLKPETLSLNESGLDFQVVFAKDTDGVPWVLRIPRRPDVSERAAAEKRVLALVRKHLPVQVPDWRVHT-----PE 79 (276)
T ss_pred hhcCCccCCCcceecCCcceeEEEEEEcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhcCCCCCCceeeec-----Cc
Confidence 34466556677888888889999999764 4489999997522 34578999999999987788999877543 34
Q ss_pred EEEEeeecCCCCC--------------------CcHHHHHHHHHHHhhcCCCC-CCCCCCCCCcccccccCCCCCccHHH
Q 020393 121 YIIMEFIEFGSSR--------------------GNQSVFGKKLAEMHKAGKSS-KGFGFDVDNTIGSTPQINKWTSNWIE 179 (326)
Q Consensus 121 ~~v~e~l~G~~~~--------------------~~~~~lg~~La~lH~~~~~~-~~fg~~~~~~~~~~~~~~~~~~~w~~ 179 (326)
+++|++++|.++. ..+.++|+.|++||+.+... ...|++.. .......
T Consensus 80 ~~~y~~i~G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~g~~~~-----------~~~~~~~ 148 (276)
T cd05152 80 LIAYPKLPGVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAAGIPVE-----------TPEEVRQ 148 (276)
T ss_pred eEEEeccCCCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhccccCCCCC-----------CHHHHHH
Confidence 7788888887541 13578999999999988632 11121110 0011111
Q ss_pred HHHHhhhHHHHHHHHhhc-CChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEcc-ccccCch
Q 020393 180 FYAEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDP-ACYYGHN 256 (326)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID~-~~~~G~~ 256 (326)
. +...++...... ......+.+.+.+.... .. ..+++|||||+|++|||++++ +.++|||| ++.+|||
T Consensus 149 ~-----~~~~l~~~~~~~~~~~~l~~~~~~~L~~~~-~~---~~~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDP 219 (276)
T cd05152 149 T-----MADRMDRVKEEFGVSEALWNRWQAWLDDDS-YW---PRHTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDP 219 (276)
T ss_pred H-----HHHHHHHHHHhcCCCHHHHHHHHHHHhhcC-CC---CCCCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCH
Confidence 1 111111111111 12222222222222111 11 356899999999999999874 45799998 6899999
Q ss_pred hhhhhhhh-hc--CCChHhHHHhhhhCC
Q 020393 257 EAEFGMSW-CA--GFGGSFYNSYFEVMP 281 (326)
Q Consensus 257 ~~Dla~~~-~~--~~~~~fl~~Y~~~~~ 281 (326)
++||+.++ .. ...++|+++|++...
T Consensus 220 a~Dla~~~~~~~~~~~~~~~~~Y~~~~g 247 (276)
T cd05152 220 ARDFVLHYRIFGEAGLERLIDAYEAAGG 247 (276)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHcCC
Confidence 99999763 22 234789999998664
No 18
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=99.88 E-value=3.9e-21 Score=175.91 Aligned_cols=224 Identities=16% Similarity=0.130 Sum_probs=142.2
Q ss_pred cceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCceEEEEeeecCCCCC----
Q 020393 63 NLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSSR---- 133 (326)
Q Consensus 63 n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~~~v~e~l~G~~~~---- 133 (326)
+.+|+|+|++|+||||..+.. ...+..|..++++|+++ +++||+++...... ++..|.+++|++|.+..
T Consensus 10 ~~v~~v~t~~g~~~LK~~~~~-~~~~~~~~~~~~~L~~~-g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~ 87 (313)
T TIGR02906 10 RNVYKVETDSGNKCLKKINYP-PERLLFILGAQEHLRKN-GFNIPKILKTKDGELYVKYNGDLYVLTEWIEGRECDFNNP 87 (313)
T ss_pred ccEEEEEeCCCCeEEEEcCCC-HHHHHHHHHHHHHHHHc-CCCCCceeecCCCCEEEEECCEEEEEehhccCcCCCCCCH
Confidence 458999999999999997532 33456789999999987 57999999875432 46789999999998753
Q ss_pred CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHH--hhhHHHHHHHHhhc-CC---hHHHHHHH
Q 020393 134 GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKLALDQY-GD---STIYQRGH 207 (326)
Q Consensus 134 ~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~--~~l~~~~~~~~~~~-~~---~~~~~~~~ 207 (326)
.+++++|+.||+||..... |..+... .+. .....|.+.+.. ..+....+...... .+ ....+.++
T Consensus 88 ~~~~~~g~~La~lH~~~~~---~~~~~~~----~~~--~~~~~w~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (313)
T TIGR02906 88 IDLKKAAKGLALFHHASKG---YVPPDGS----KIR--SKLGKWPKQFEKRLKELERFKKIALEKKYKDEFDKLYLKEVD 158 (313)
T ss_pred HHHHHHHHHHHHHHHhCCC---CCCCCcc----hhh--ccccchHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHH
Confidence 4579999999999999864 2111110 000 011234433321 11222222211111 11 10111111
Q ss_pred H-------HHHHhc-----ccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh---hh---cCC
Q 020393 208 R-------LMKNLA-----PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS---WC---AGF 268 (326)
Q Consensus 208 ~-------l~~~~~-----~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~---~~---~~~ 268 (326)
. .++.+. ++......+.++||||+|++||++++ +..+|||+ .+.+|++++||+.+ ++ ..+
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~~~~~ 237 (313)
T TIGR02906 159 YFLERGKKALELLNKSKYYDLCKEAKKIRGFCHQDYAYHNILLKD-NEVYVIDFDYCTIDLPVRDLRKLIIKLMKKNGVW 237 (313)
T ss_pred HHHHHHHHHHHHHhhCcHHHHHHhhcCcCceEcCCCCcccEEEeC-CcEEEEECcccccCCcHHHHHHHHHHHHHhccCC
Confidence 2 211111 11111134689999999999999987 45799998 58999999999964 23 234
Q ss_pred C----hHhHHHhhhhCCCCcCHHHHHHHHHHHHH
Q 020393 269 G----GSFYNSYFEVMPKQPGFEKRRDLYMLYHY 298 (326)
Q Consensus 269 ~----~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~ 298 (326)
. .+|+++|++..|+++...+.+..+.++..
T Consensus 238 d~~~~~~~l~gY~~~~~L~~~e~~~l~~~l~~p~ 271 (313)
T TIGR02906 238 DLEKAKEIIEAYSSINPLSKEEKEVLYIDLAFPH 271 (313)
T ss_pred CHHHHHHHHHHhhccCCCCHHHHHHHHHHHhChH
Confidence 4 57999999999999776666665554443
No 19
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.88 E-value=6e-22 Score=172.99 Aligned_cols=192 Identities=26% Similarity=0.366 Sum_probs=119.9
Q ss_pred eEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccC--CCceEEEEeeecC
Q 020393 53 KICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEF 129 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~~~~v~e~l~G 129 (326)
+|+++++|..|.+|+|++++++||+|..+.. ....+..|.+++++|++. ++|||+++..+... .+..+++|++++|
T Consensus 1 ~i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~-~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEH-GIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp -EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHT-TSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CCccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhc-CCCCceEEeecccccccccceEEEEEecc
Confidence 4789999999999999999999999999764 345678999999999987 56999999854332 3567999999999
Q ss_pred CCCC---------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHH--hhhHHHHHHHHhhcC
Q 020393 130 GSSR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKLALDQYG 198 (326)
Q Consensus 130 ~~~~---------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~--~~l~~~~~~~~~~~~ 198 (326)
.++. ....++|+.|++||+...+...+ ..+...... ...............
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPF------------------ADWPEWRLEFLRQLESWTARLRASEL 141 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCH------------------THHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccccccccccccccchhhhhhccccccccccc------------------ccccccccccccccccccccccchhh
Confidence 8642 24688999999999996321100 011111100 001110000000001
Q ss_pred ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeec-CCCCeEEEcc-ccccCchhhhhhhhh
Q 020393 199 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD-KNGEPVILDP-ACYYGHNEAEFGMSW 264 (326)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~-~~~~~~iID~-~~~~G~~~~Dla~~~ 264 (326)
.....+..+++.+.+...+.. ..+.++||||+|++|||++ +++..+|||| .+.+|+|++|++.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~ 208 (239)
T PF01636_consen 142 FDDLEELEERLLQELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLL 208 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHH
Confidence 111112222244444433322 3688999999999999998 3343489997 689999999999764
No 20
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=99.87 E-value=1.3e-20 Score=169.95 Aligned_cols=232 Identities=19% Similarity=0.215 Sum_probs=146.7
Q ss_pred CCchhHHHHHHhcCCCc-ceeeEeEeCCccccceEEEEeCCccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCc
Q 020393 33 LSDDPIREWILSEGKAT-HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAP 107 (326)
Q Consensus 33 ~~~~~i~~~l~~~~~~~-~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP 107 (326)
++.+.+..++....++. ....++...+|++|.+|++..++.+||||.++.. .......|.++++.+... ++|+|
T Consensus 8 ~~~~~l~~~l~~~ip~~~~~~~v~~~~~G~sn~t~~~~~~~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~-~vP~p 86 (321)
T COG3173 8 LDIAALAAYLRSQIPGYAGLLIVEEISGGWSNDTFRLGDTGQKYVLRKPPRGDPVESAHDEKREYRVIAALLDV-DVPVP 86 (321)
T ss_pred CCHHHHHHHHHhhCcCcCCCceeeeccCCcccceEEEecCCceEEEecCCccccchhhhHHHhHHHHHHHhcCC-CCCCc
Confidence 55678889998775543 3455666789999999999888789999944321 123345677777777664 67888
Q ss_pred ceeeecccCC-CceEEEEeeecCCCC---------C-CcHH-HHHHHHHHHhhcCCCC-CCCCCCCCCcccccccCCCCC
Q 020393 108 RPFKVGALPT-GGSYIIMEFIEFGSS---------R-GNQS-VFGKKLAEMHKAGKSS-KGFGFDVDNTIGSTPQINKWT 174 (326)
Q Consensus 108 ~~~~~~~~~~-~~~~~v~e~l~G~~~---------~-~~~~-~lg~~La~lH~~~~~~-~~fg~~~~~~~~~~~~~~~~~ 174 (326)
+++....... |.+|+||+|++|+.. . .... ++++.|+.||+++... +.+|.+.. +.+ .+.
T Consensus 87 ~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~-~~~--rql---- 159 (321)
T COG3173 87 RAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNA-YRG--RQL---- 159 (321)
T ss_pred ccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCc-ccc--chh----
Confidence 8877654433 688999999999632 1 2345 8999999999999521 12221111 111 011
Q ss_pred ccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-cccc
Q 020393 175 SNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYY 253 (326)
Q Consensus 175 ~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~ 253 (326)
..|...+. ...+.. ....+....+...+.+..+. . +.+++++|||+|++|+|+++++.++|||| .+.+
T Consensus 160 ~~~~~~~~-----~~~~~~--~~~~p~~~~~~~Wl~~~~p~--~--~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l 228 (321)
T COG3173 160 ARWDDEYR-----RAKKEL--GGRIPLADRLIKWLEANRPP--W--AGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL 228 (321)
T ss_pred hHHHHHHH-----HHHHhc--cCCCchHHHHHHHHHhcCCC--c--CCCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence 22222221 000000 01112222222222222221 1 57899999999999999999888999998 5789
Q ss_pred Cchhhhhhhh-hh--c------CCC------hHhHHHhhhhCCCC
Q 020393 254 GHNEAEFGMS-WC--A------GFG------GSFYNSYFEVMPKQ 283 (326)
Q Consensus 254 G~~~~Dla~~-~~--~------~~~------~~fl~~Y~~~~~l~ 283 (326)
|||..||+.+ |. . .+. ..+++.|++...++
T Consensus 229 GDP~~Dl~~~~W~~~~~~~~~~~~~~~~~~~~~l~a~y~~~~G~~ 273 (321)
T COG3173 229 GDPLEDLAIICWTIFDEPAARAIFRLGVPALDELLATYARARGLA 273 (321)
T ss_pred CCcHHHHHHHHhccccchhhhhhcccCcccHHHHHHHHHHhcCcc
Confidence 9999999977 63 1 111 35778898887765
No 21
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.86 E-value=2.2e-20 Score=162.01 Aligned_cols=191 Identities=18% Similarity=0.225 Sum_probs=127.1
Q ss_pred eEeEeCCccccceEEEEeCC-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC--CCceEEEEe
Q 020393 53 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIME 125 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~~~~v~e 125 (326)
+++++++|..|.+|++++.+ .+||+|+.+.. ....++.|.++++.+++. ++++|+++...... .+..+++|+
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccCCceEEEE
Confidence 46889999999999999987 58999998753 235678999999999886 68999999877542 246799999
Q ss_pred eecCCCCCC--------------cHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHH
Q 020393 126 FIEFGSSRG--------------NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLK 191 (326)
Q Consensus 126 ~l~G~~~~~--------------~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~ 191 (326)
|++|.++.. .+.++|+.|++||+...+. .+.... +. . ..+. . ..+..+.+
T Consensus 81 ~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--~~~~~~---~~------~-~~~~---~-~~~~~~~~ 144 (223)
T cd05154 81 RVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAA--VGLGDL---GR------P-GGYL---E-RQVARWRR 144 (223)
T ss_pred EeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhh--cCCccc---CC------C-CchH---H-HHHHHHHH
Confidence 999986531 1478999999999988632 221100 00 0 0000 0 11222221
Q ss_pred HHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecC--CCCeEEEcc-ccccCchhhhhhhh
Q 020393 192 LALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK--NGEPVILDP-ACYYGHNEAEFGMS 263 (326)
Q Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~--~~~~~iID~-~~~~G~~~~Dla~~ 263 (326)
......... ...++++.+.+.+.+.. ..+.++||||+|++|||+++ ++.++|||| .+.+|+|++||+.+
T Consensus 145 ~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~ 216 (223)
T cd05154 145 QYDASRTDE--PPAMERLLRWLEAHLPA-DSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWL 216 (223)
T ss_pred HHHhhcccc--cHHHHHHHHHHHhhCCC-CCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHH
Confidence 111110000 01222233333322332 25789999999999999988 555799997 68999999999975
No 22
>PRK06148 hypothetical protein; Provisional
Probab=99.86 E-value=7.6e-20 Score=189.76 Aligned_cols=239 Identities=13% Similarity=0.116 Sum_probs=160.4
Q ss_pred CCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhc-CCCCCcce
Q 020393 33 LSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYET-RTIRAPRP 109 (326)
Q Consensus 33 ~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~-~~~~vP~~ 109 (326)
++.+++.+.+.++ +|.. .++++++ |..|.+|+|+++++ .||+|+.++. ....++.|.+++.+|+++ .++|||++
T Consensus 11 ~s~~~~~~~~~~~-ygl~-~~~~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP~~ 87 (1013)
T PRK06148 11 FTTKDAEALLAQH-FGIS-ATATPLD-GERDLNFRLTTDDGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVPRL 87 (1013)
T ss_pred CCHHHHHHHHHHH-cCCc-eEEeecC-CcCCceEEEEeCCCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcCee
Confidence 5778999999887 3433 3467785 56799999999877 8999999753 345567788899999875 36899999
Q ss_pred eeecccC--------CC--ceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCC
Q 020393 110 FKVGALP--------TG--GSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK 172 (326)
Q Consensus 110 ~~~~~~~--------~~--~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~ 172 (326)
+...... +| ..+.+++|++|.++. ...+++|+.||+||..... |..+... ....
T Consensus 88 i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~---F~~p~~~------r~~~ 158 (1013)
T PRK06148 88 IPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQG---FMHPGAL------RDLD 158 (1013)
T ss_pred eecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhc---CCCCCcc------cccc
Confidence 9764331 22 467899999998752 3479999999999999753 4322110 1122
Q ss_pred CCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcc----cccCCCCCcceeecCCCCCCeeecCCC---CeE
Q 020393 173 WTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP----LFEGVNVEPCLLHGDLWSGNISSDKNG---EPV 245 (326)
Q Consensus 173 ~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~l~~~~~~~~LiHgDl~~~NiL~~~~~---~~~ 245 (326)
|...... .+...+. ...++..++.++++.+.+.+ .+. ..+..+||||++++|||+++++ .++
T Consensus 159 Wdl~~~~-----~l~~~l~----~i~d~~~r~~l~~~~~~~~~~v~p~l~--~Lp~~vIHgDln~~NiLv~~~~~~~isG 227 (1013)
T PRK06148 159 WDLRHAG-----RARDRLH----FIDDPEDRALVERFLARFERNVAPRLA--ALPAQVIHNDANDYNILVDADDGERISG 227 (1013)
T ss_pred cccccch-----hhhhhhh----hcCCHHHHHHHHHHHHHHHHHHHHHHh--cCCcceECCCCCcccEEEcCCCCcceEE
Confidence 3211000 1111111 11233334444444444332 222 3577899999999999999773 579
Q ss_pred EEcc-ccccCchhhhhhhhh--h--cCC-----ChHhHHHhhhhCCCCcCHHHHHHHHH
Q 020393 246 ILDP-ACYYGHNEAEFGMSW--C--AGF-----GGSFYNSYFEVMPKQPGFEKRRDLYM 294 (326)
Q Consensus 246 iID~-~~~~G~~~~Dla~~~--~--~~~-----~~~fl~~Y~~~~~l~~~~~~r~~~y~ 294 (326)
|||| ++++++.++|||+.. + ... ..+|++||++.+|+++.+.+.+....
T Consensus 228 iIDFgDa~~~~~v~DLAialay~~~~~~~p~~~~~a~laGY~sv~pLt~~E~~~L~~li 286 (1013)
T PRK06148 228 LIDFGDAVHAPRICEVAIAAAYAILDHPDPIGAAAALVAGYHAVYPLQAQELDLLFDLI 286 (1013)
T ss_pred EEECcccccccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 9998 699999999999652 2 111 14799999999999987666555443
No 23
>PRK06149 hypothetical protein; Provisional
Probab=99.85 E-value=6.5e-20 Score=190.10 Aligned_cols=238 Identities=15% Similarity=0.142 Sum_probs=157.9
Q ss_pred CCchhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCccEEEEecCC-CCcchHHHHHHHHHHHHhc-CCCCCcce
Q 020393 33 LSDDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRS-IGPSMFEGEALGLGAMYET-RTIRAPRP 109 (326)
Q Consensus 33 ~~~~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~-~~~~vP~~ 109 (326)
++.+++++++.+. ++. -++++++ |..|.+|+|++++++||||+.++ .....+..|.+++++|+++ .+++||+|
T Consensus 17 ls~~~~~~ll~~~ygl~---~~~~~L~-s~~d~nf~v~t~~~~yVLKi~~~~~~~~~l~~e~~~l~hL~~~~~glpvp~p 92 (972)
T PRK06149 17 VSEAQAERILAEHYGLS---GTLTELG-SQQDRNFRVDSDGGRFVLKICHAAYAAVELEAQHAALRHLAEREPALRVPVV 92 (972)
T ss_pred CCHHHHHHHHHHhcCCc---eEEEecC-CcCcceEEEEecCCcEEEEeCCccCChHHHHHHHHHHHHHHhhCCCCCCcee
Confidence 6789999999755 443 2456674 66789999999889999999975 2345677899999999876 36999999
Q ss_pred eeecccC---------CCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCC
Q 020393 110 FKVGALP---------TGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW 173 (326)
Q Consensus 110 ~~~~~~~---------~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~ 173 (326)
+...... .+..+.+++|++|..+. ..++++|+.+|+||..... |. .+... ....|
T Consensus 93 i~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~~~~~~~~~~~~~lG~~lArlh~al~~---f~--hp~~~----r~~~W 163 (972)
T PRK06149 93 IPALDGEELLTLDVRGQGLRVRLLDYLPGQPLTRLGHLAPASVAGLGALCARVARALAD---FD--HPGLD----RTLQW 163 (972)
T ss_pred eECCCCCeEEEEecCCceEEEEEEEecCCccccccCCCCHHHHHHHHHHHHHHHHHHcC---CC--CCCCC----Ccccc
Confidence 9865432 13468899999997652 3579999999999999974 32 22110 01123
Q ss_pred CccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHH----HHhcccccCCCCCcceeecCCCCCCeeecCCC-----Ce
Q 020393 174 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM----KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EP 244 (326)
Q Consensus 174 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-----~~ 244 (326)
... . . ...+...+ ....++..++.+++.. +.+..... ..+..+||||++.+||+|+++. .+
T Consensus 164 dl~--~-~-~~~~~~ll----~~i~d~~~r~~l~~~~~~~~~~l~~~~~--~L~~g~IH~Dl~~~Nilv~~~~~~~~~v~ 233 (972)
T PRK06149 164 DLR--H-A-GPVVAHLL----SHITDPAQRARIAEATRDAARRLQPLAP--ALPLQAVHLDITDDNVVGSRDADGRWQPD 233 (972)
T ss_pred chh--h-h-HHHHHHHH----hhcCCHHHHHHHHHHHHHHHHHhhhhhh--hCcccccCCCCCcccEEEcCCCCCCccee
Confidence 110 0 0 00011111 1111222233333333 33333232 3578999999999999998652 35
Q ss_pred EEEcc-ccccCchhhhhhhh---hhc--CC----ChHhHHHhhhhCCCCcCHHHHHHHH
Q 020393 245 VILDP-ACYYGHNEAEFGMS---WCA--GF----GGSFYNSYFEVMPKQPGFEKRRDLY 293 (326)
Q Consensus 245 ~iID~-~~~~G~~~~Dla~~---~~~--~~----~~~fl~~Y~~~~~l~~~~~~r~~~y 293 (326)
+|||| ++.+++..+|||+. ++. .. ..+|++||++++|+++.+.+.+...
T Consensus 234 giIDFgD~~~~~~i~DLAial~~~~~~~~~dp~~~~~~l~GY~svrpLt~~E~~~L~~l 292 (972)
T PRK06149 234 GVIDFGDLVRTWRVADLAVTCASLLHHAGGDPFSILPAVRAYHAVRPLSEAELKALWPL 292 (972)
T ss_pred EEEEcccchhhhHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 99998 79999999999974 231 11 1469999999999998766554443
No 24
>PRK12396 5-methylribose kinase; Reviewed
Probab=99.85 E-value=1.6e-20 Score=173.27 Aligned_cols=227 Identities=15% Similarity=0.155 Sum_probs=146.5
Q ss_pred ccccccccCCCchhHHHHHHhc-CC--CcceeeEeEeCCccccceEEEEeC--CccEEEEecCCC---------CcchHH
Q 020393 24 FSKRRTFATLSDDPIREWILSE-GK--ATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---------GPSMFE 89 (326)
Q Consensus 24 ~~~~~~~~~~~~~~i~~~l~~~-~~--~~~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---------~~~~~~ 89 (326)
+|+|..|-+++.+.+.+++.+. +. ..+..+++++++|..|.||||... .+.+|||.+.+. +.....
T Consensus 1 ~~~~~~y~~l~~~~v~~yl~~~l~~~~~~~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~ 80 (409)
T PRK12396 1 MSKFTKYFLMEANDVIVYVKEKLSKFEHAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIR 80 (409)
T ss_pred CCccccceeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHH
Confidence 4678889999999999999885 42 223345999999999999999864 458999988531 234567
Q ss_pred HHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC-----------CCcHHHHHHHHHHHhhcCCCCCCCCC
Q 020393 90 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGF 158 (326)
Q Consensus 90 ~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~fg~ 158 (326)
.|.++|+.+.+..|-.||++|..+. ....++||+++.... +..++++|+.||+.|-..+. |+.
T Consensus 81 ~E~~aL~~~~~~~P~~VP~vy~~D~---e~~~~vMEdL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd---~~l 154 (409)
T PRK12396 81 IESDVLQLEEELAPGLVPKVYLFDS---VMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSD---VVM 154 (409)
T ss_pred HHHHHHHHHHhhCCCcCCeEEEECc---HHhhHHHHhCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcch---hcc
Confidence 8999999998876667999999984 588999999975321 25679999999999886642 211
Q ss_pred CC------------CCcccccccCCCCCccHHHHHHHhh-hHHHHHHHHhh-cCChHHHHHHHHHHHHhcccccCCCCCc
Q 020393 159 DV------------DNTIGSTPQINKWTSNWIEFYAEHR-LGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEP 224 (326)
Q Consensus 159 ~~------------~~~~~~~~~~~~~~~~w~~~~~~~~-l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 224 (326)
+. +..+..... --..+.+.+.-..++ ..+.+....+. ..|..++..+.++... +- ....
T Consensus 155 ~~~~kk~~v~~f~N~eLc~ited-lvft~Py~~~~~~n~~~~~~~~~~~~~l~~D~~Lk~ev~~Lk~~----F~--~~~~ 227 (409)
T PRK12396 155 NHKEKKELVKNYINPELCEITED-LVYAEPFTNHNKRNELFPLNEGWIREHIYSDKELRLEVAKLKFS----FM--TNAQ 227 (409)
T ss_pred ChHHHHHhhHhcCCHHHHHHhcc-cccccCcccchhccCCCChhhHHHHHHHhcCHHHHHHHHHHHHH----HH--hcch
Confidence 11 000000000 000000000000000 11111111111 1233333333333332 22 3577
Q ss_pred ceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh
Q 020393 225 CLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW 264 (326)
Q Consensus 225 ~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~ 264 (326)
+|||||||+|||++++++ +.|||+ .+++|++.+||+.+.
T Consensus 228 aLlHGDlHtGSI~v~~~~-~kvIDpEFAfyGP~gFDiG~~l 267 (409)
T PRK12396 228 ALIHGDLHTGSVFVKNDS-TKVIDPEFAFYGPMGYDIGNVM 267 (409)
T ss_pred hhccCcCCCCCEEecCCc-eEEEcccccccCCcHHHHHHHH
Confidence 999999999999998775 899996 689999999999763
No 25
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=99.85 E-value=3.9e-20 Score=169.21 Aligned_cols=239 Identities=13% Similarity=0.091 Sum_probs=145.5
Q ss_pred HHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccee-eecccC--
Q 020393 40 EWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF-KVGALP-- 116 (326)
Q Consensus 40 ~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~-~~~~~~-- 116 (326)
+++.++ +.++.+++++ .|.+|+|.|++|.||+|..... ...+.....++++|+++ |+++|.++ ......
T Consensus 3 ~vl~~Y--~l~v~~i~~~----~~~v~~v~T~~G~~~Lk~~~~~-~~~l~~~~~~~~~L~~~-G~~~~~~~~~t~~G~~~ 74 (309)
T TIGR02904 3 AVLEHY--GLQPEEMEQV----TGKLFKVYTDQGVFALKKLYAD-RNTIESFVSQIQVLSEK-GFSRIVPVYPTKDGSYY 74 (309)
T ss_pred hhHhhc--CCCceeeecc----cCcEEEEEeCCCCEEEEEeccc-hHhHHHHHHHHHHHHHc-CCCcCCceeecCCCCee
Confidence 456555 4467777554 4688999999999999998743 34455677888999887 67765555 433321
Q ss_pred ---CCceEEEEeeecCCCC---CCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHH
Q 020393 117 ---TGGSYIIMEFIEFGSS---RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQL 190 (326)
Q Consensus 117 ---~~~~~~v~e~l~G~~~---~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~ 190 (326)
++..|++|+|++|... ...+.++|+.||+||..+.+..... ...... ....+...|.... ..+....
T Consensus 75 ~~~~~~~~~L~~wi~G~~~~~~~~~~~~~~~~LA~lH~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~--~~l~~~~ 147 (309)
T TIGR02904 75 LFHGHFLYYLMPWLDIERNEERNYQHESMFQELALLHRKTVKTERVT--EEELKK---HYERTLSRWENIP--EGLEEFI 147 (309)
T ss_pred eEECCEEEEEeCCcccccccCCHHHHHHHHHHHHHHHHhhhCCCccc--HhHHHh---HHHHHHHHHHHHH--HHHHHHH
Confidence 4667999999999643 2457999999999999997421111 000000 0011112232111 0112222
Q ss_pred HHHHh-hcCC----------hHHHHHHHHHHHHhcccc----cCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccC
Q 020393 191 KLALD-QYGD----------STIYQRGHRLMKNLAPLF----EGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYG 254 (326)
Q Consensus 191 ~~~~~-~~~~----------~~~~~~~~~l~~~~~~~l----~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G 254 (326)
+.... ...+ ......++.+.+.+..+. .....+.++||||++++|+|+++++..+|||| .+++|
T Consensus 148 ~~~~~~~~~~~fe~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d 227 (309)
T TIGR02904 148 VEAEAKWYMSPFELQACTYYHEVMQAAEFAQNKLEDWHEATKEKESWRTVLVHGKLSLSHFLYDETRGGYFINFEKASFA 227 (309)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcceeeeCCCCcHHhEEEcCCCCEEEEEhhhcccC
Confidence 11111 0111 011222333333222221 11135779999999999999988888899998 58999
Q ss_pred chhhhhhhhh---h--cCCC----hHhHHHhhhhCCCCcCHHHHHHHH
Q 020393 255 HNEAEFGMSW---C--AGFG----GSFYNSYFEVMPKQPGFEKRRDLY 293 (326)
Q Consensus 255 ~~~~Dla~~~---~--~~~~----~~fl~~Y~~~~~l~~~~~~r~~~y 293 (326)
+|++||+... . ..+. .+++++|++.+|+++...+.+..+
T Consensus 228 ~~~~DLa~~~~~~~~~~~~~~~~~~~~l~~Y~~~~pL~~~E~~~l~~~ 275 (309)
T TIGR02904 228 SPLTDLAAFFRRSFGTYPQPIDEMFEWFYTYEKTLPLTDEEIHLLTSY 275 (309)
T ss_pred CcHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 9999999542 1 2232 589999999999987644434333
No 26
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=99.84 E-value=5.2e-20 Score=161.73 Aligned_cols=195 Identities=16% Similarity=0.185 Sum_probs=119.9
Q ss_pred eEeEeCCccccceEEEEeCC---ccEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 53 KICPVGGGCINLASRYGTDA---GSFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~---~~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
+++++.+|.+|.+|+|++.+ ++||+|++..... ...+.|..+++.+++. ++ +|+++.... ..++|||+
T Consensus 2 ~i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~-gl-~P~v~~~~~-----~~~l~e~i 74 (235)
T cd05157 2 TFKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH-GL-APKLYATFQ-----NGLIYEFI 74 (235)
T ss_pred eEEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC-CC-CCeEEEEeC-----CcEEEEee
Confidence 68899999999999999873 5899999875322 2235799999999876 45 899886542 25899999
Q ss_pred cCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHh--hcC
Q 020393 128 EFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD--QYG 198 (326)
Q Consensus 128 ~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~--~~~ 198 (326)
+|.++. ....++|+.|++||+..... ...... .+....| +....+.. .+......... ...
T Consensus 75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~---~~~~~~----~~~~~~~-~~i~~~~~--~~~~~~~~~~~~~~~~ 144 (235)
T cd05157 75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPE---AISSPG----TPKPILW-PTIRKWIN--LVPTEFKKPEKFQKKT 144 (235)
T ss_pred CCCcCCHHHccChHHHHHHHHHHHHHhcccccc---cccccC----CCCCcHH-HHHHHHHH--HhHHhhccccchhhhh
Confidence 998763 34688999999999988642 110000 0000001 11111110 01100000000 000
Q ss_pred ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecC-CCCeEEEcc-ccccCchhhhhhhhh
Q 020393 199 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK-NGEPVILDP-ACYYGHNEAEFGMSW 264 (326)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~-~~~~~iID~-~~~~G~~~~Dla~~~ 264 (326)
.....+.+.+....+...+.....+.++||||++++|||+++ ++..++||| .+.+|+|.+|||.+.
T Consensus 145 ~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~~ 212 (235)
T cd05157 145 KAISFEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANHF 212 (235)
T ss_pred ccccHHHHHHHHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHHHH
Confidence 000111222222223222322235689999999999999987 466899998 599999999999753
No 27
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=99.83 E-value=2.7e-19 Score=163.12 Aligned_cols=196 Identities=15% Similarity=0.152 Sum_probs=119.6
Q ss_pred eEeEeCCccccceEEEEeCC--------ccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 53 KICPVGGGCINLASRYGTDA--------GSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~--------~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
+++++.+|.+|.+|+|+..+ ++||+|++.... ......|.++++.|++.+ .+|+++.... ...
T Consensus 2 ~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g--~~P~~~~~~~-----~~~ 74 (302)
T cd05156 2 EVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERN--LGPKLYGIFP-----NGR 74 (302)
T ss_pred eEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCC--CCCceEEEeC-----CCc
Confidence 68899999999999999865 589999987532 234578999999999873 5899998763 246
Q ss_pred EEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHh
Q 020393 123 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD 195 (326)
Q Consensus 123 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~ 195 (326)
|++|++|..+. ....++|+.|++||+..... .+.... ..+....+...|..... ..........+
T Consensus 75 v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 146 (302)
T cd05156 75 IEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPL--SPEERD----LTPAIWKLLKQWLDLAE--TVIEIVDSDSE 146 (302)
T ss_pred hhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCC--CCCcCc----ccchHHHHHHHHHHHhh--hhhhhcccchh
Confidence 89999998753 24689999999999988641 010000 00000000011110000 00000000000
Q ss_pred hcCCh---HHHHHHHHHHHHhcccccC-CCCCcceeecCCCCCCeeecCC----CCeEEEcc-ccccCchhhhhhhh
Q 020393 196 QYGDS---TIYQRGHRLMKNLAPLFEG-VNVEPCLLHGDLWSGNISSDKN----GEPVILDP-ACYYGHNEAEFGMS 263 (326)
Q Consensus 196 ~~~~~---~~~~~~~~l~~~~~~~l~~-~~~~~~LiHgDl~~~NiL~~~~----~~~~iID~-~~~~G~~~~Dla~~ 263 (326)
..... ...+.+..+.+.+...... ...+.++||||++++|||++++ +...+||| .+.+|+|.+|||.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~~ 223 (302)
T cd05156 147 KLLEVELSLFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANH 223 (302)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHHH
Confidence 00000 0111222222222211110 1367899999999999999874 66899997 69999999999974
No 28
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.83 E-value=2.2e-19 Score=149.46 Aligned_cols=152 Identities=20% Similarity=0.206 Sum_probs=111.5
Q ss_pred eEeEeCCccccceEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 53 KICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
.++++++|..|.+|+++.++++|++|+++... ...++.|+.+++.+.+. ..+|+++..+. +..++||||++|.
T Consensus 2 ~~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~--~~~P~~~~~~~---~~~~lv~e~i~G~ 76 (170)
T cd05151 2 HISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEA--GIGPKLYYFDP---ETGVLITEFIEGS 76 (170)
T ss_pred ceeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHh--CCCCceEEEeC---CCCeEEEEecCCC
Confidence 57899999999999999988899999987542 23467899999999875 34899998763 3568999999998
Q ss_pred CCCCc-------HHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393 131 SSRGN-------QSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 203 (326)
Q Consensus 131 ~~~~~-------~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 203 (326)
++... ..++++.|++||+..
T Consensus 77 ~l~~~~~~~~~~~~~l~~~l~~LH~~~----------------------------------------------------- 103 (170)
T cd05151 77 ELLTEDFSDPENLEKIAKLLKKLHSSP----------------------------------------------------- 103 (170)
T ss_pred ccccccccCHHHHHHHHHHHHHHhCCC-----------------------------------------------------
Confidence 65321 112222222222211
Q ss_pred HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhh-cCCC----hHhHHHhh
Q 020393 204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWC-AGFG----GSFYNSYF 277 (326)
Q Consensus 204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~-~~~~----~~fl~~Y~ 277 (326)
..+.++||||++++||+++ ++...+||| .+.+|+|.+||+.++. ..++ .+|++.|.
T Consensus 104 -----------------~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~~~Dla~~~~~~~~~~~~~~~~~~~y~ 165 (170)
T cd05151 104 -----------------LPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDPLFDLANFFSEAKLSEDQEEELLEAYF 165 (170)
T ss_pred -----------------CCCceeecCCCCcCcEEEE-CCeEEEEecccccCCChHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 1267999999999999998 445889998 5889999999997642 2332 57999998
Q ss_pred hhC
Q 020393 278 EVM 280 (326)
Q Consensus 278 ~~~ 280 (326)
...
T Consensus 166 ~~~ 168 (170)
T cd05151 166 GRE 168 (170)
T ss_pred CCC
Confidence 654
No 29
>PLN02236 choline kinase
Probab=99.78 E-value=5.2e-17 Score=150.44 Aligned_cols=235 Identities=19% Similarity=0.180 Sum_probs=145.6
Q ss_pred chhHHHHHHhcCCCc------ceeeEeEeCCccccceEEEEeCC------ccEEEEecCCCCcch--HHHHHHHHHHHHh
Q 020393 35 DDPIREWILSEGKAT------HITKICPVGGGCINLASRYGTDA------GSFFVKTNRSIGPSM--FEGEALGLGAMYE 100 (326)
Q Consensus 35 ~~~i~~~l~~~~~~~------~v~~v~~l~~G~~n~~y~v~~~~------~~~vlK~~~~~~~~~--~~~E~~~l~~L~~ 100 (326)
...|.+++.+..+.. +..+++++.||.+|.+|+++..+ .+||+|++....... ...|..+++.+++
T Consensus 16 ~~~~~~~~~~~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~ 95 (344)
T PLN02236 16 PDELKRILHSLASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSR 95 (344)
T ss_pred hHHHHHHHHHhcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHH
Confidence 355667777664433 46789999999999999998532 379999997643211 3679999999998
Q ss_pred cCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCC
Q 020393 101 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW 173 (326)
Q Consensus 101 ~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~ 173 (326)
. ++ .|+++.... + ..+++|++|.++. ....++++.|++||+...+.. ...
T Consensus 96 ~-gl-~P~~~~~~~---~--g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~----~~~------------ 152 (344)
T PLN02236 96 H-GQ-GPRLLGRFP---N--GRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGP----KNV------------ 152 (344)
T ss_pred c-CC-CCceEEEEC---C--ceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCC----CCc------------
Confidence 6 45 899997763 2 2689999998763 235799999999999875210 000
Q ss_pred CccHHHHHHHhhhHHHHHHHHhhcCCh----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEc
Q 020393 174 TSNWIEFYAEHRLGYQLKLALDQYGDS----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILD 248 (326)
Q Consensus 174 ~~~w~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID 248 (326)
..|. ++..+++...+...+. ...+.+...++.+...+.....+.++||+|++++|||++++ +...+||
T Consensus 153 -~~~~------~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID 225 (344)
T PLN02236 153 -LLWD------RLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIID 225 (344)
T ss_pred -hHHH------HHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEe
Confidence 1111 1222221111100000 00111222222222222222357799999999999999864 5689999
Q ss_pred c-ccccCchhhhhhhhhh---cCC--------------C----hHhHHHhhhhCC--CCc----CHHHHHHHHHHHHHH
Q 020393 249 P-ACYYGHNEAEFGMSWC---AGF--------------G----GSFYNSYFEVMP--KQP----GFEKRRDLYMLYHYL 299 (326)
Q Consensus 249 ~-~~~~G~~~~Dla~~~~---~~~--------------~----~~fl~~Y~~~~~--l~~----~~~~r~~~y~l~~~l 299 (326)
| ++.+|+|.+|||...+ ..+ + ..|++.|.+... .++ .+..++.+|.+...+
T Consensus 226 ~Eya~~~~~~~Dia~~~~e~~~~y~~~~~~~~~~~~~~~~~~~~~fi~~Yl~~~g~~~~~~~~~~l~~~v~~~~~~~~l 304 (344)
T PLN02236 226 YEYASYNPVAYDIANHFCEMAADYHSETPHILDYSKYPGEEERRRFIRTYLSSSGEEPSDEEVEQLLDDVEKYTLASHL 304 (344)
T ss_pred ehhccccchHHHHHHHHHHHHHhhcCCCcccCchhhCcCHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhhHhHH
Confidence 7 6899999999996532 211 1 368999986432 221 244455566555444
No 30
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=99.75 E-value=3.2e-17 Score=149.79 Aligned_cols=195 Identities=21% Similarity=0.239 Sum_probs=119.7
Q ss_pred EeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 56 PVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
.+++|..|.||||..+++ ++|||.+.+. +......|.++|+.+.+..|-.||++|..+. ....++
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~---e~~~~v 78 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDT---EMAVTV 78 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcc---ccceeh
Confidence 578999999999998764 7999988531 2344567899998888765556999999984 588999
Q ss_pred EeeecCCCC-----------CCcHHHHHHHHHHHhhcCCCCCCCCCCCCCccccccc-CCC----------CCccHHHHH
Q 020393 124 MEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQ-INK----------WTSNWIEFY 181 (326)
Q Consensus 124 ~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~-~~~----------~~~~w~~~~ 181 (326)
||+++.... +..++++|+.||+.|-..+. +..+.......... .|. ..+.+.+..
T Consensus 79 MEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd---~~~~~~~kk~l~~~f~N~eLc~itEdlvft~py~~~~ 155 (370)
T TIGR01767 79 MEDLSHHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSD---YALEPKVKKALVAQFTNPELCDITERLVFTDPYFDHD 155 (370)
T ss_pred HhhCccchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcc---cccCHHHHHHHHHHhCCHHHHHHHHHhccccchhhhh
Confidence 999975321 25679999999999855531 22111000000000 000 000100000
Q ss_pred HHhhhHHHHHHHHhhc-CChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhh
Q 020393 182 AEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAE 259 (326)
Q Consensus 182 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~D 259 (326)
.++..+.++...+.. .++.+...+.+ +...+. ....+|||||||++||++.+++ ..+||+ .+.+|++.+|
T Consensus 156 -~n~~~p~l~~~~~~l~~d~~l~~~v~~----Lk~~f~--~~~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~G~~~~D 227 (370)
T TIGR01767 156 -TNDFEEELRPFVAKLRNDDSLKIEAAK----LKHSFL--ASAETLLHGDLHSGSIFVSEHE-TKVIDPEFAFYGPIGFD 227 (370)
T ss_pred -hhcCChhHHHHHHHHhcCHHHHHHHHH----HHHhhc--cCcceeeeccCCcccEEEcCCC-CEEEcCcccccCchHhh
Confidence 011223332222111 12222222222 222222 3577999999999999997765 789997 5899999999
Q ss_pred hhhhh
Q 020393 260 FGMSW 264 (326)
Q Consensus 260 la~~~ 264 (326)
|+.+.
T Consensus 228 lg~~i 232 (370)
T TIGR01767 228 IGQFI 232 (370)
T ss_pred HHHHH
Confidence 99763
No 31
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=99.75 E-value=8.4e-17 Score=148.33 Aligned_cols=200 Identities=18% Similarity=0.244 Sum_probs=128.4
Q ss_pred ceeeEeEeCCccccceEEEEeCCc-----cEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 50 HITKICPVGGGCINLASRYGTDAG-----SFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~~~-----~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
...+++++.||.+|.+|+|+..++ +||+|++...+... .+.|..+++.+++. ++ .|+++.... .| +
T Consensus 15 ~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~-gl-~P~~l~~~~--~G---~ 87 (330)
T PLN02421 15 SDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAA-GF-GAKLLGVFG--NG---M 87 (330)
T ss_pred CceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhc-CC-CCceeEEeC--Cc---E
Confidence 467899999999999999986532 89999997643222 35799999999886 34 588887653 12 5
Q ss_pred EEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHh
Q 020393 123 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD 195 (326)
Q Consensus 123 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~ 195 (326)
|.+|++|..+. .....+++.|++||+...+. . ..+ .-|. ++..+++.+..
T Consensus 88 i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~---~-~~~-------------~~~~------~i~~y~~~~~~ 144 (330)
T PLN02421 88 IQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPG---S-KEP-------------QLWN------DIFKFYEKAST 144 (330)
T ss_pred eehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCC---C-CCC-------------cHHH------HHHHHHHHhhh
Confidence 99999998763 24689999999999987531 0 000 1111 11122211111
Q ss_pred -hcCChHH--------HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEcc-ccccCchhhhhhhhh
Q 020393 196 -QYGDSTI--------YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDP-ACYYGHNEAEFGMSW 264 (326)
Q Consensus 196 -~~~~~~~--------~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID~-~~~~G~~~~Dla~~~ 264 (326)
...++.. ...+.+.+..+..++.....+.++||+|++++|||++++ +...+||+ .+.++||.+|||...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f 224 (330)
T PLN02421 145 VKFEDPEKQKKYETISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHF 224 (330)
T ss_pred cccCcHHHhhhhcccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHHHH
Confidence 0001000 111122222223333322467899999999999999754 56899996 699999999999753
Q ss_pred h--cCC--------C----hHhHHHhhhh
Q 020393 265 C--AGF--------G----GSFYNSYFEV 279 (326)
Q Consensus 265 ~--~~~--------~----~~fl~~Y~~~ 279 (326)
+ .++ + ..|++.|...
T Consensus 225 ~E~~~~~~~~~~~p~~~~~~~fl~~Y~~~ 253 (330)
T PLN02421 225 NEYAGFDCDYSLYPSKEEQYHFFRHYLRP 253 (330)
T ss_pred HHHcccccCcccCcCHHHHHHHHHHhCCc
Confidence 2 111 1 3689999854
No 32
>PTZ00296 choline kinase; Provisional
Probab=99.71 E-value=2.4e-15 Score=142.99 Aligned_cols=208 Identities=11% Similarity=0.028 Sum_probs=129.3
Q ss_pred cCCCchhHHHHHHhcCCCc-----ceeeEeEeCCccccceEEEEeCC----------ccEEEEecCCCCcch--HHHHHH
Q 020393 31 ATLSDDPIREWILSEGKAT-----HITKICPVGGGCINLASRYGTDA----------GSFFVKTNRSIGPSM--FEGEAL 93 (326)
Q Consensus 31 ~~~~~~~i~~~l~~~~~~~-----~v~~v~~l~~G~~n~~y~v~~~~----------~~~vlK~~~~~~~~~--~~~E~~ 93 (326)
+.++.+.+..++.+..+++ +-++++++.||.+|.+|++++.+ .+|++|++...+... ...|..
T Consensus 82 ~~~~~~~~~~i~~~~vp~W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~ 161 (442)
T PTZ00296 82 DLTDPLYIKKICLEKVPEWRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFE 161 (442)
T ss_pred ccCChHHHHHHHHHHCCccccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHH
Confidence 3456666777776543332 12499999999999999998752 379999997643322 356899
Q ss_pred HHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccc
Q 020393 94 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGS 166 (326)
Q Consensus 94 ~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~ 166 (326)
+++.|++. + -.|+++... ..+.|.+|++|.++. ....++++.|++||+...... . +. ..+.
T Consensus 162 v~~~ls~~-g-i~P~l~~~f-----~gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~-~--~~--~f~~ 229 (442)
T PTZ00296 162 VYKTMSKY-R-IAPQLLNTF-----SGGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKRH-L--PE--HWDR 229 (442)
T ss_pred HHHHHHHC-C-CCCceEEEe-----CCCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhccccccc-C--ch--hccC
Confidence 99999886 3 478888554 347789999998653 346899999999999863210 0 00 0000
Q ss_pred cccCCCCCccHHHHHHHhhhHHHHHHHHhhcC-C------hHHHHHHHHHHHHhcc--cccCCCCCcceeecCCCCCCee
Q 020393 167 TPQINKWTSNWIEFYAEHRLGYQLKLALDQYG-D------STIYQRGHRLMKNLAP--LFEGVNVEPCLLHGDLWSGNIS 237 (326)
Q Consensus 167 ~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~-~------~~~~~~~~~l~~~~~~--~l~~~~~~~~LiHgDl~~~NiL 237 (326)
.| .-|. ++..++..+.+... . ..+.+.+..+.+.+.. .+.....+.++||+|+.++|||
T Consensus 230 ~p------~~f~------~i~~~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL 297 (442)
T PTZ00296 230 TP------CIFK------MMEKWKNQLSKYKNIEKYQRDIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNII 297 (442)
T ss_pred CC------cHHH------HHHHHHHHHHhhccchHhHhhHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCcccee
Confidence 01 1111 12222222111000 0 0112222323222211 0112235789999999999999
Q ss_pred ecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393 238 SDKNGEPVILDP-ACYYGHNEAEFGMS 263 (326)
Q Consensus 238 ~~~~~~~~iID~-~~~~G~~~~Dla~~ 263 (326)
..+++ ..+||| .|.+.+|++|||..
T Consensus 298 ~~~~~-l~LIDfEYAg~ndpafDIAn~ 323 (442)
T PTZ00296 298 NTNKC-LRLIDFEYSGYNFLATDIANF 323 (442)
T ss_pred ecCCC-EEEEeecccccccHHHHHHHH
Confidence 86555 889997 69999999999965
No 33
>PRK10271 thiK thiamine kinase; Provisional
Probab=99.62 E-value=1.1e-14 Score=121.70 Aligned_cols=170 Identities=12% Similarity=0.154 Sum_probs=105.8
Q ss_pred EEEeeecCCCCC--CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCC
Q 020393 122 IIMEFIEFGSSR--GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 199 (326)
Q Consensus 122 ~v~e~l~G~~~~--~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~ 199 (326)
++.+|++|++.+ ....+++..++++|+.+. +|.+.+ +. .++..+.........+
T Consensus 1 llv~Wl~Ge~~~~~~~~~~La~~l~~LH~~p~----~~~~~~-------------------l~-~~i~~Yw~~l~~~~~~ 56 (188)
T PRK10271 1 MAVDYLPGEVKSYLPDTNELAGLLYHLHQQPR----FGWRIT-------------------LL-PLLEQYWQQSDPARRT 56 (188)
T ss_pred CcccccCCCcCCCccCHHHHHHHHHHHhcCCC----CCCCCC-------------------HH-HHHHHHHHHhccccCC
Confidence 467999999875 358999999999999775 443211 00 2344444444322223
Q ss_pred hHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhhcC--CChHhHHHh
Q 020393 200 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWCAG--FGGSFYNSY 276 (326)
Q Consensus 200 ~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~~~--~~~~fl~~Y 276 (326)
+.... ............+.+.++||||++|+|+++++++ ..+||+ ++..|||.+|||.++... -.+.|++.|
T Consensus 57 ~~wl~----~~~~~~~~~~~~~l~~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~~DLa~~~~~~~~~~~~~l~~Y 131 (188)
T PRK10271 57 PFWLR----MLKRLRKAGEPRPLRLAPLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDY 131 (188)
T ss_pred HHHHH----HHHHHHhcccCCCCCeeeecCCCCCccEEEECCC-EEEEeCCcccCCCHHHHHHHHHcCCHHHHHHHHHHH
Confidence 22222 2222222222224678999999999999998777 779997 689999999999875421 125799999
Q ss_pred hhhCCCCcC-HHHHHHHHHHHHHHH-------HHHHh-ccCcHHHHHHHHHHH
Q 020393 277 FEVMPKQPG-FEKRRDLYMLYHYLN-------HYNLF-GSGYRSSALSIIDDY 320 (326)
Q Consensus 277 ~~~~~l~~~-~~~r~~~y~l~~~l~-------~~~~~-~~~~~~~~~~~~~~~ 320 (326)
+...-.+.. +..|+..+..+..+. ++... ...|...+..+.+++
T Consensus 132 ~~~~~~d~~~~~~~~~~W~p~~~~m~llWyev~~qq~~d~~fl~~a~~~~~~~ 184 (188)
T PRK10271 132 ATRAKIDAAQLWRQVRRWFPWVLMLKAGWFEYRWRQTGDQQFIRLADDTWRQL 184 (188)
T ss_pred hCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhh
Confidence 854334443 445555544333322 23333 456888888777755
No 34
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=99.61 E-value=1.9e-14 Score=121.34 Aligned_cols=210 Identities=16% Similarity=0.150 Sum_probs=142.8
Q ss_pred EeEeCCcccc-ceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393 54 ICPVGGGCIN-LASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 131 (326)
Q Consensus 54 v~~l~~G~~n-~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 131 (326)
.+++..|.+. .+||+..+.+ -+++|+.+......+..|.+.++|++.+ ++++|+|+..... .++.|++|+.++|.+
T Consensus 23 w~~v~~geS~~~v~rl~a~~r~g~~~k~~~~~~~a~L~~Ea~RlrWla~~-~l~~P~V~~~~~~-~~~~wLl~salpG~~ 100 (266)
T COG3231 23 WRRVTEGESGAGVFRLFADSRPGLYLKIASSGPAAELEGEAARLRWLAGQ-GLGCPRVLGLEDD-ADQAWLLMSALPGED 100 (266)
T ss_pred cceeeccCCCCeEEEEeccCCCceEEEEecCcchhhhhhHHHHHHHhccc-CCCCCceEeeccC-cchhHHhhhhcCCCc
Confidence 4456666554 6999887554 6889998765556788999999999987 6999999998764 579999999999997
Q ss_pred CC---------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCC---
Q 020393 132 SR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD--- 199 (326)
Q Consensus 132 ~~---------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~--- 199 (326)
.. ..+..+++.|..||..+...+.|+.... .++....+.......+
T Consensus 101 ~s~~~~~~~p~r~v~~la~aLR~LH~l~~~aCPFd~rl~----------------------~rl~~a~~r~~a~~vdesd 158 (266)
T COG3231 101 ASHPRYALDPKRAVPLLAEALRRLHELPVEACPFDRRLA----------------------RRLAKARARVRAGLVDESD 158 (266)
T ss_pred ccchhhcCCHHHHHHHHHHHHHHHhcCChhhCCcchHHH----------------------HHHHHHHHHHhccCCChhh
Confidence 62 3467889999999998875444432110 1111111000000001
Q ss_pred --h-----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh-hh-----
Q 020393 200 --S-----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS-WC----- 265 (326)
Q Consensus 200 --~-----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~-~~----- 265 (326)
+ ...++.+++.+.. .. ....++||||-..-|+|+++++-+|+||. +...||...||+.. |.
T Consensus 159 fd~e~qgr~~~El~d~L~~~r----p~-~edLVv~HGDACLPN~i~d~~rf~GfIDlGrlGVaDRh~DLala~~s~~~nl 233 (266)
T COG3231 159 FDEERQGRTAEELFDELEARR----PA-VEDLVVTHGDACLPNFILDGWRFSGFIDLGRLGVADRHQDLALATWSLRFNL 233 (266)
T ss_pred cChhhcCCCHHHHHHHHHhcC----Cc-hhhceeecCcccCcceEecCCceEEeeecCcccchHHHHhHHHHHHHHHhcc
Confidence 0 0123333333322 21 35679999999999999988876899997 67899999999965 31
Q ss_pred c--CCChHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393 266 A--GFGGSFYNSYFEVMPKQPGFEKRRDLYMLY 296 (326)
Q Consensus 266 ~--~~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~ 296 (326)
+ .+.+.|+..|.... .+ ..|+.+|.+.
T Consensus 234 ~g~~~~~~fl~~Yg~~~-~d---~~rl~~yr~l 262 (266)
T COG3231 234 GGDVWDDPFLDAYGRGA-ID---PARLAYYRLL 262 (266)
T ss_pred CcchhhHHHHHHhCcCC-CC---HHHHHHHHHH
Confidence 1 24578999998432 12 4788888754
No 35
>PTZ00384 choline kinase; Provisional
Probab=99.60 E-value=7.8e-14 Score=130.42 Aligned_cols=203 Identities=13% Similarity=0.058 Sum_probs=124.6
Q ss_pred chhHHHHHHhcCCCc-----ceeeEeEeCCccccceEEEEeCCc---c-----EEEEecCCCCcc--hHHHHHHHHHHHH
Q 020393 35 DDPIREWILSEGKAT-----HITKICPVGGGCINLASRYGTDAG---S-----FFVKTNRSIGPS--MFEGEALGLGAMY 99 (326)
Q Consensus 35 ~~~i~~~l~~~~~~~-----~v~~v~~l~~G~~n~~y~v~~~~~---~-----~vlK~~~~~~~~--~~~~E~~~l~~L~ 99 (326)
...+.+++.+.-++. +..+++++.||.+|.+|+|+.+++ . +++|.+.....- ..+.|.++++.|+
T Consensus 31 ~~~~~~~~~~~~p~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls 110 (383)
T PTZ00384 31 HSNLKSLCIRHVPFWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLG 110 (383)
T ss_pred HHHHHHHHHHHCCccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHH
Confidence 355667777764433 346899999999999999986543 3 455665432211 1256899999998
Q ss_pred hcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCC
Q 020393 100 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK 172 (326)
Q Consensus 100 ~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~ 172 (326)
+. --.|+++.... .++++||++|..+. .....+++.|++||+.... +. +...+..|
T Consensus 111 ~~--glgP~l~~~f~-----~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~---~~---p~~~~~~p---- 173 (383)
T PTZ00384 111 DN--NFGPKIIGRFG-----DFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTE---LV---PKEWDRTP---- 173 (383)
T ss_pred hC--CCCCeEEEecC-----CEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhccccc---CC---CccccCcc----
Confidence 86 35899998763 37999999999764 2467999999999997642 10 00000011
Q ss_pred CCccHHHHHHHhhhHHHHHHHH---hh---cCC-hHHHHHHHHHHHHhcccccC---CCCCcceeecCCCCCCeeecCCC
Q 020393 173 WTSNWIEFYAEHRLGYQLKLAL---DQ---YGD-STIYQRGHRLMKNLAPLFEG---VNVEPCLLHGDLWSGNISSDKNG 242 (326)
Q Consensus 173 ~~~~w~~~~~~~~l~~~~~~~~---~~---~~~-~~~~~~~~~l~~~~~~~l~~---~~~~~~LiHgDl~~~NiL~~~~~ 242 (326)
..|. ++..++.... .. ..+ ..+.+.++.+...+...+.. ...+.++||.|++++|||.++++
T Consensus 174 --~~~~------~i~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~~~~ 245 (383)
T PTZ00384 174 --MFLT------KISTWSQHVERIIKKYNLDFDYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDFNQG 245 (383)
T ss_pred --hHHH------HHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEecCCC
Confidence 1111 1111111110 00 011 11222333332222221211 12467999999999999986554
Q ss_pred CeEEEcc-ccccCchhhhhhhh
Q 020393 243 EPVILDP-ACYYGHNEAEFGMS 263 (326)
Q Consensus 243 ~~~iID~-~~~~G~~~~Dla~~ 263 (326)
..+||+ .|.+++|.+|||..
T Consensus 246 -l~lID~EYA~~n~~~fDLAn~ 266 (383)
T PTZ00384 246 -IYFIDFDFAGFNYVGWEIANF 266 (383)
T ss_pred -EEEEEeccccCCchHhHHHHH
Confidence 889996 69999999999965
No 36
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=99.58 E-value=9.4e-14 Score=130.97 Aligned_cols=223 Identities=17% Similarity=0.236 Sum_probs=136.5
Q ss_pred cCCCchhHHHHHHhc-C----CCcceeeEeEeC--CccccceEEEEeC-----Cc-----cEEEEecCCC----------
Q 020393 31 ATLSDDPIREWILSE-G----KATHITKICPVG--GGCINLASRYGTD-----AG-----SFFVKTNRSI---------- 83 (326)
Q Consensus 31 ~~~~~~~i~~~l~~~-~----~~~~v~~v~~l~--~G~~n~~y~v~~~-----~~-----~~vlK~~~~~---------- 83 (326)
|+++|+++.+-+++. + +| +-++++.|+ .|..+.+.+|+.+ ++ ++|||+.+..
T Consensus 11 Thvtw~dve~~l~~~l~t~a~~g-~~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~ 89 (414)
T PF07914_consen 11 THVTWEDVEEALQEALGTKAKFG-ENKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMK 89 (414)
T ss_pred CceeHHHHHHHHHHHhCCCcCcC-CCcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhc
Confidence 789999999999876 3 23 456777776 5679999999852 11 7999998520
Q ss_pred -------Cc-c-----------hHHHHHHHHHHHHhc--CCCCCcceeeecccCC---CceEEEEeeecCCCC-------
Q 020393 84 -------GP-S-----------MFEGEALGLGAMYET--RTIRAPRPFKVGALPT---GGSYIIMEFIEFGSS------- 132 (326)
Q Consensus 84 -------~~-~-----------~~~~E~~~l~~L~~~--~~~~vP~~~~~~~~~~---~~~~~v~e~l~G~~~------- 132 (326)
+. . .-.+|+..++.+... .++|+|++|......+ ..++++|||+++...
T Consensus 90 ~~~~~~~~~e~~~~~~~~~l~~~HNrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~ 169 (414)
T PF07914_consen 90 FEGGKGFDEEKEWEEFEKFLREMHNREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENL 169 (414)
T ss_pred cccccccchhhHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCC
Confidence 00 1 113678888888765 3789999998765432 369999999998642
Q ss_pred C-CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCC-CccHHHHHHHhhhHHHHHHHHhhc---CChHHHHHHH
Q 020393 133 R-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW-TSNWIEFYAEHRLGYQLKLALDQY---GDSTIYQRGH 207 (326)
Q Consensus 133 ~-~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~-~~~w~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~ 207 (326)
+ .+..++++.||++|+.+...+.-.. ....| ..+ ...+..++....+........... .++.+.+.++
T Consensus 170 ~~eql~~iv~aLA~~~A~sl~ls~ee~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~ 242 (414)
T PF07914_consen 170 SVEQLLQIVRALAKFHALSLKLSEEEK--KSISG-----PDFLEEMFGEFFSEEGMKKIFENLRKIFGFFSPEKLEELIE 242 (414)
T ss_pred CHHHHHHHHHHHHHHHHhHccCCHHHh--hhccC-----chHHHHHHHHHhchHHHHHHHHHHHhhccccChHHHHHHHH
Confidence 1 6789999999999998874210000 00000 001 001112221111222222221111 1122222222
Q ss_pred HHHHH------------hcccccCCCCCcceeecCCCCCCeeecCCC-----CeEEEcc-ccccCchhhhhhhhh
Q 020393 208 RLMKN------------LAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EPVILDP-ACYYGHNEAEFGMSW 264 (326)
Q Consensus 208 ~l~~~------------~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-----~~~iID~-~~~~G~~~~Dla~~~ 264 (326)
.+... +.+.+ ..+++|||||||..|||++.++ ..+|||| .+..|.|..||+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~i~~~l---G~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll 314 (414)
T PF07914_consen 243 KFEHYLPDIKNFEKASNINKQL---GIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLL 314 (414)
T ss_pred HHHHhcccHHhHHHHhhhHHhc---CCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHH
Confidence 22211 11111 3589999999999999999853 2489997 679999999999764
No 37
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=99.57 E-value=3e-13 Score=123.83 Aligned_cols=222 Identities=14% Similarity=0.128 Sum_probs=139.1
Q ss_pred CCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCC-CcceeeecccC-----CCce
Q 020393 47 KATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIR-APRPFKVGALP-----TGGS 120 (326)
Q Consensus 47 ~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~-vP~~~~~~~~~-----~~~~ 120 (326)
+|..+.++.+. | .+..+.|++|.|+||.....+...+.....++++|.++ +++ ||.++.+.... +|..
T Consensus 8 Y~l~~~~~~~~--g---~~~~~~t~~g~y~Lk~~e~~~~~~l~f~~~~~~~L~~~-G~~~v~~~i~tk~G~~~~~~~g~~ 81 (313)
T TIGR02905 8 FGLYCDERFRV--G---RYEAFRANNQAYLIVPVDGLEEEELAELMAMSDYLQQA-GDETVLELVKTKFGQSSALIDGVS 81 (313)
T ss_pred hCcCcccceec--C---ceeeEEeCCceEEEEEecCCCHHHHHHHHHHHHHHHHc-CCCcccceeecCCCCEeEEECCEE
Confidence 36678888886 3 25667899999999999544444566778889999887 576 99999876543 5899
Q ss_pred EEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhc-CC
Q 020393 121 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY-GD 199 (326)
Q Consensus 121 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~-~~ 199 (326)
|++++|++|..... ..+|+.||+||..+.. |..+..+. .....|...|..... ++....+.+..+. .+
T Consensus 82 y~L~~w~~~~~~~~--~~~~~~LA~lH~as~~---f~~~~~~~----~~~~~~~~~~~k~~~--el~~~~~~~~~~~~~s 150 (313)
T TIGR02905 82 YYLFKAPEFNERRG--VDLGRELATFHKRGRQ---YPRPIWKK----SRIGQWKELWAKRLD--QLEDWWQSLLAQGPQT 150 (313)
T ss_pred EEEEeCCCcccchh--HHHHHHHHHHHHhcCC---CCCCcccc----ccccccHHHHHHHHH--HHHHHHHHHHhcCCCC
Confidence 99999988765322 3999999999999974 32221110 011233333332221 2332222221111 11
Q ss_pred h----------HHHHHHHHHHHHhc-----ccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhhh
Q 020393 200 S----------TIYQRGHRLMKNLA-----PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSW 264 (326)
Q Consensus 200 ~----------~~~~~~~~l~~~~~-----~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~~ 264 (326)
+ ...+..+..++.+. .+-.. ....++||||+...|++ +++ ..++||++..+++|..||+...
T Consensus 151 ~Fd~~fl~~~d~~~~~a~~ai~~l~~s~y~~~~~~-~~~~~lCH~d~~~hn~l-~~~-~~~~i~~d~~~D~~~~DL~~fi 227 (313)
T TIGR02905 151 LFDEQFLETFPYYLGLTENAIQYAADTELDDEPGL-ADSGTICHERFGETTWL-ERG-GLIKPPTEWVYDHPARDLAEWI 227 (313)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHccchhhhhc-cccCccccCccCccccc-cCC-CeEecccccccccchhHHHHHH
Confidence 1 11223333333221 11111 24669999999999987 444 4778887667999999999541
Q ss_pred ---h-c--C--CC--hHhHHHhhhhCCCCcCHHH
Q 020393 265 ---C-A--G--FG--GSFYNSYFEVMPKQPGFEK 288 (326)
Q Consensus 265 ---~-~--~--~~--~~fl~~Y~~~~~l~~~~~~ 288 (326)
+ . . +. ..++++|++..||++...+
T Consensus 228 rk~~~k~~~~~~~~~~~~l~~Y~~~~pL~~~e~~ 261 (313)
T TIGR02905 228 RERYMGEIRQNQRAIASFLQEYEQAAPLTPFSWR 261 (313)
T ss_pred HHHHHHhccccHHHHHHHHHHhhhcCCCCHHHHH
Confidence 2 1 1 22 4789999999999875433
No 38
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=1.1e-13 Score=111.73 Aligned_cols=144 Identities=25% Similarity=0.268 Sum_probs=103.7
Q ss_pred EeEeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
++.++.|..+.+|+++.+++.+++|...... ...+..|..+++.+... +.++|+++..... .+..+++|||++|..+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~-~~~~p~~~~~~~~-~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARK-GLPVPKVLASGES-DGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHc-CCCCCeEEEEcCC-CCccEEEEEecCCeec
Confidence 4678899999999999888899999986532 24578899999999876 6889999987654 4689999999998755
Q ss_pred CCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHH
Q 020393 133 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKN 212 (326)
Q Consensus 133 ~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (326)
... .. ..+. .+. ..+.+.++.
T Consensus 81 ~~~--------------~~-----------------------~~~~------~~~----------------~~~~~~l~~ 101 (155)
T cd05120 81 DEV--------------SE-----------------------EEKE------DIA----------------EQLAELLAK 101 (155)
T ss_pred ccC--------------CH-----------------------HHHH------HHH----------------HHHHHHHHH
Confidence 322 10 0000 000 011111222
Q ss_pred hcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393 213 LAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS 263 (326)
Q Consensus 213 ~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~ 263 (326)
+. . ....+++|||++++||++++++...++|+ .+.++++.+|++.+
T Consensus 102 lh---~--~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~~d~~~~ 148 (155)
T cd05120 102 LH---Q--LPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPAFDLAAA 148 (155)
T ss_pred Hh---C--CCceEEEecCCCcceEEEECCcEEEEEecccccCCChHHHHHHH
Confidence 11 1 12368999999999999988677899997 58899999999965
No 39
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=99.47 E-value=3e-12 Score=112.84 Aligned_cols=214 Identities=16% Similarity=0.125 Sum_probs=127.4
Q ss_pred eEeCCccccceEEEEeCCc-cEEEEecCCCCcchHHHHH---HHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec-C
Q 020393 55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEA---LGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE-F 129 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~---~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~-G 129 (326)
.++.+|..+.|+.|++.+| +.|+|+..+... ...|. ..|++.... -+.+++..+ .....+++|++. |
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~--~~~E~~g~~~L~~w~G~---GaVrll~~d---~~~~AlLLErl~~g 79 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHAE--AEHEARGEAALRWWNGR---GAVRLLAAD---PERGALLLERLDPG 79 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCccc--chhhhhHHhHhheeCCC---Cceeeeccc---cccchhhhhhccCC
Confidence 3466789999999998887 899999986322 23444 446655443 356888887 358899999995 5
Q ss_pred CCCC---------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCCh
Q 020393 130 GSSR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 200 (326)
Q Consensus 130 ~~~~---------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~ 200 (326)
.++. +....++..+++||.........++ +. ..+|...+.. ........ .+
T Consensus 80 ~~L~~~~~~g~d~~a~~i~a~l~~~L~~~~~~~~p~~l---------~~----l~~~~~~l~~-----~~~~~~~~-~~- 139 (253)
T PF04655_consen 80 RSLASLPREGDDDEATRIAAGLLRRLHRPAPEPLPSGL---------PP----LADWFARLFA-----RARERAGA-PP- 139 (253)
T ss_pred CchhhcccccCchHHHHHHHHHHHHHhCCCCCCCCccc---------hh----HHHHHHHHHH-----HhHhhhcc-cc-
Confidence 5542 2357889999999987642100011 00 1222222211 11111100 11
Q ss_pred HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhhhhc---CC----C----
Q 020393 201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCA---GF----G---- 269 (326)
Q Consensus 201 ~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~~~~---~~----~---- 269 (326)
..++++..+...+++.+ +.+.+++|||||++|||-...+.-..||+....|+|+||++.+.+. .. .
T Consensus 140 --~~l~~~a~~~~~~Ll~~-~~~~~lLHGDLH~~NIL~~~~~~WlaIDPkgl~Gdp~yd~a~~l~n~~~~~~~~~~~~~i 216 (253)
T PF04655_consen 140 --RRLVDAAAALARELLAS-PGEEVLLHGDLHHGNILAAGRRGWLAIDPKGLVGDPAYDLAPLLRNPLDELPDADDPERI 216 (253)
T ss_pred --HHHHHHHHHHHHHHhcC-CCcceeeccccchHhhhccCCCCceEeCCcccccccccCHHHHHhCccccccccccHHHH
Confidence 12333333333444443 4567999999999999986644345799999999999999965432 11 1
Q ss_pred hHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHH
Q 020393 270 GSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHY 302 (326)
Q Consensus 270 ~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~ 302 (326)
...++...+...++ .+|+.-|.+...+..+
T Consensus 217 ~~r~~~la~~~gld---~~R~~~W~~~~~vlsa 246 (253)
T PF04655_consen 217 RRRAALLAEAAGLD---RERILAWAFARAVLSA 246 (253)
T ss_pred HHHHHHHHHHHCcC---HHHHHHHHHHHHHHHH
Confidence 12344444555555 3566666655554333
No 40
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=99.45 E-value=7.2e-13 Score=120.32 Aligned_cols=219 Identities=17% Similarity=0.227 Sum_probs=120.9
Q ss_pred CCccccceEEEEeCC-----c-----cEEEEecCCC--------CcchHHHHHHHHHHHHhcC----------CCCCcce
Q 020393 58 GGGCINLASRYGTDA-----G-----SFFVKTNRSI--------GPSMFEGEALGLGAMYETR----------TIRAPRP 109 (326)
Q Consensus 58 ~~G~~n~~y~v~~~~-----~-----~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~----------~~~vP~~ 109 (326)
|+|..+.+|||+.+. + .+|+|..+.. ....+++|..+++.+.... ...+|++
T Consensus 2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~ 81 (294)
T PF02958_consen 2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC 81 (294)
T ss_pred CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence 467788888877522 1 6999998731 1355788998887664211 1247999
Q ss_pred eeecccCCCceEEEEeeecCCCC---------C-CcHHHHHHHHHHHhhcCCCCCC-----CCCCCCCcccccccCCCCC
Q 020393 110 FKVGALPTGGSYIIMEFIEFGSS---------R-GNQSVFGKKLAEMHKAGKSSKG-----FGFDVDNTIGSTPQINKWT 174 (326)
Q Consensus 110 ~~~~~~~~~~~~~v~e~l~G~~~---------~-~~~~~lg~~La~lH~~~~~~~~-----fg~~~~~~~~~~~~~~~~~ 174 (326)
+..+.. .+..++|||.|..... + +.++.+.+.||++|+.+..... ++.......... ....-.
T Consensus 82 ~~~~~~-~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~fHA~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 159 (294)
T PF02958_consen 82 YYADED-PGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKFHAASWALEEKDPELFEELSSGLFEEP-FFREEL 159 (294)
T ss_pred EEeccC-CCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhCchhhhhccccceecc-chhhhh
Confidence 988743 3468999999964321 1 4578899999999998863211 110000000000 000000
Q ss_pred ccHHHHHHHhhhHHHHHHHHhhcC-----ChHHHHHHHHHHHHhccccc-CCCCCcceeecCCCCCCeeecCCC-----C
Q 020393 175 SNWIEFYAEHRLGYQLKLALDQYG-----DSTIYQRGHRLMKNLAPLFE-GVNVEPCLLHGDLWSGNISSDKNG-----E 243 (326)
Q Consensus 175 ~~w~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~l~-~~~~~~~LiHgDl~~~NiL~~~~~-----~ 243 (326)
..|..-+....+....+....... ...+......+.+....+.. ......+|||||+|.+|||+..++ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~~ 239 (294)
T PF02958_consen 160 EEWFEEFFEQGLKAFIESLDDEWPEYEEYSEKLEALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKPID 239 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEcccccccccc
Confidence 111111111111111111111100 01122333334444433332 124567999999999999997652 3
Q ss_pred eEEEcc-ccccCchhhhhhhhhhcCCC--------hHhHHHhhh
Q 020393 244 PVILDP-ACYYGHNEAEFGMSWCAGFG--------GSFYNSYFE 278 (326)
Q Consensus 244 ~~iID~-~~~~G~~~~Dla~~~~~~~~--------~~fl~~Y~~ 278 (326)
..+||| .+.+|.|+.||+.+.+...+ +.+++.|.+
T Consensus 240 ~~liDfQ~~~~g~p~~Dl~~fl~~s~~~~~r~~~~~~ll~~Y~~ 283 (294)
T PF02958_consen 240 VVLIDFQLARYGSPAIDLAYFLYTSLDPELRREHEDELLRHYHE 283 (294)
T ss_pred ceeeccccccCCCcHhHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 689997 68999999999976432222 356666654
No 41
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=99.37 E-value=1.2e-12 Score=113.21 Aligned_cols=168 Identities=20% Similarity=0.184 Sum_probs=90.8
Q ss_pred ccEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHH
Q 020393 73 GSFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKL 143 (326)
Q Consensus 73 ~~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~L 143 (326)
.+||+|++...+... ...|..+++.+++. --.|+++..... ..+++|++|.++. .....+++.|
T Consensus 3 ~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~--g~~p~~~~~~~~-----g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l 75 (211)
T PF01633_consen 3 EKYLVRIPGEGTENFIDRENENEALKLLSEA--GLGPKIIYFFEN-----GRVEEFIEGRTLSPEDFRNPEILKRIAKLL 75 (211)
T ss_dssp SEEEEEEEESCGCSHHHHHHHHHHHHHHHHT--TSSS-EEEEETT-----EEEEE--SSEE--CGGGGSHHHHHHHHHHH
T ss_pred CEEEEEeCCCCcccccCHHHHHHHHHHHHHc--CCCCeEEEEcCC-----CcEEEEecccccChhhccChHHHHHHHHHH
Confidence 479999997653323 35688899999875 358899987632 4678999998763 2358999999
Q ss_pred HHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHH-hhhHHHHHHHHhhcCCh---HHHHHHHHHHHHhcccccC
Q 020393 144 AEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE-HRLGYQLKLALDQYGDS---TIYQRGHRLMKNLAPLFEG 219 (326)
Q Consensus 144 a~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~-~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~l~~ 219 (326)
++||+...+. .. ... .-| ..+..+... .... .... ..... .....+...+..+.+.+..
T Consensus 76 ~~lH~~~~~~--~~-~~~---------~~~-~~i~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~l~~~~~~~~~~l~~ 138 (211)
T PF01633_consen 76 AKLHSIPISP--NS-KKP---------DLW-DRIDKYMNKKSEFL--FKRK--KKKKSIDKEDLEDLQEELEELEKLLEK 138 (211)
T ss_dssp HHHHTHHHTT--SS-SS----------HHH-HHHHHHHHHHHTCC--CCHH--TTTCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhccccc--cc-Ccc---------hHH-HHhhhhccchhhhh--hhhh--hhccccccCCHHHHHHHHhhhhhhhhc
Confidence 9999988611 00 000 000 011111000 0000 0000 00000 0111122222223333322
Q ss_pred CCCCcceeecCCCCCCeee-cCCCCeEEEcc-ccccCchhhhhhhhh
Q 020393 220 VNVEPCLLHGDLWSGNISS-DKNGEPVILDP-ACYYGHNEAEFGMSW 264 (326)
Q Consensus 220 ~~~~~~LiHgDl~~~NiL~-~~~~~~~iID~-~~~~G~~~~Dla~~~ 264 (326)
...+.++||+|++++|||+ ..++...+||| .|.++++.+|||...
T Consensus 139 ~~~~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~fDia~~f 185 (211)
T PF01633_consen 139 SNSPLVFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRAFDIANFF 185 (211)
T ss_dssp SCGGEEEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHHHHHHHHH
T ss_pred cCCCceEeeccCccccEEeccCCCeEEEecHHHHhhccchhhHHHHH
Confidence 2456899999999999999 55667899997 699999999999764
No 42
>COG4857 Predicted kinase [General function prediction only]
Probab=99.32 E-value=4.2e-11 Score=104.30 Aligned_cols=204 Identities=18% Similarity=0.141 Sum_probs=121.0
Q ss_pred cCCCcceeeEeEeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCCcceeee
Q 020393 45 EGKATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKV 112 (326)
Q Consensus 45 ~~~~~~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~ 112 (326)
.|+...--.|+.++.|..|.+|.|+...+ ..|+|.+-+. +...-..|+.+|..-.++.|..||+++..
T Consensus 26 ~G~~~s~ltvkEIGDGNlNyvF~V~~~~~~ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf~ 105 (408)
T COG4857 26 IGPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYFF 105 (408)
T ss_pred hCCCccceEEEEecCCceeEEEEEecCCCCeehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEee
Confidence 35443446789999999999999987655 7888987431 12233457888877777778899999999
Q ss_pred cccCCCceEEEEeeec-----------CCCCCCcHHHHHHHHHHHhhcCCCC--CCC-------CCCCCCcccccccCCC
Q 020393 113 GALPTGGSYIIMEFIE-----------FGSSRGNQSVFGKKLAEMHKAGKSS--KGF-------GFDVDNTIGSTPQINK 172 (326)
Q Consensus 113 ~~~~~~~~~~v~e~l~-----------G~~~~~~~~~lg~~La~lH~~~~~~--~~f-------g~~~~~~~~~~~~~~~ 172 (326)
| +....++||++. |..++.....+|..|++---..+.. ..+ -|..+..+.-+ ..--
T Consensus 106 D---e~mavivMEdls~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k~kK~~vk~FtNpELCDIt-E~LV 181 (408)
T COG4857 106 D---EIMAVIVMEDLSPHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKADVKLFTNPELCDIT-ENLV 181 (408)
T ss_pred c---chhhhhhHhhhhHHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchHhHHHHHHHhCCchhhcch-hcee
Confidence 8 468999999975 4444566788888888733222210 000 01111111000 0000
Q ss_pred CCccH-----HHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEE
Q 020393 173 WTSNW-----IEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL 247 (326)
Q Consensus 173 ~~~~w-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iI 247 (326)
+.+.+ ..+.. .++++..+.... +.+++-.+.++ ...+. ....+|||||||.|.|++.+.+ +-+|
T Consensus 182 FtdPyfd~d~Nr~~~-~~l~~fVe~L~~---n~dlkvea~kL----k~~F~--~~aetLiHGDLHsGSIfvte~e-tkvI 250 (408)
T COG4857 182 FTDPYFDADRNRHTI-PQLDPFVEELRK---NRDLKVEAQKL----KHKFM--AYAETLIHGDLHSGSIFVTEKE-TKVI 250 (408)
T ss_pred ecCcccccccccccc-ccchHHHHHHhc---CcchhhhHHHH----HHHHH--HHhHHHhccccccCcEEeecCc-ceee
Confidence 00000 00000 123333333221 11222222222 22232 2456999999999999997654 8899
Q ss_pred cc-ccccCchhhhhhhh
Q 020393 248 DP-ACYYGHNEAEFGMS 263 (326)
Q Consensus 248 D~-~~~~G~~~~Dla~~ 263 (326)
|+ .++||+-.+|++++
T Consensus 251 DPEFaFYGPmafDiG~~ 267 (408)
T COG4857 251 DPEFAFYGPMAFDIGML 267 (408)
T ss_pred CccccccCcchhhHHHH
Confidence 96 69999999999975
No 43
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.27 E-value=9.2e-11 Score=100.12 Aligned_cols=155 Identities=16% Similarity=0.189 Sum_probs=98.7
Q ss_pred eCCccccceEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 57 VGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.|..+.+|+....+.++++|...... ...+..|.++++.+... ++++|.++..+ .+..+++||
T Consensus 2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~lv~e 77 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA-GVNTPVVYDVD---PDNKTIVME 77 (199)
T ss_pred CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEE---CCCCEEEEE
Confidence 4678889999998766789999854311 12345789999999875 68999998775 356799999
Q ss_pred eecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 020393 126 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 205 (326)
Q Consensus 126 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 205 (326)
+++|.++... + .. .. . .+.
T Consensus 78 ~~~g~~l~~~-------~---~~-~~------------------------~---~~~----------------------- 96 (199)
T TIGR03724 78 YIEGKPLKDV-------I---EE-GN------------------------D---ELL----------------------- 96 (199)
T ss_pred EECCccHHHH-------H---hh-cH------------------------H---HHH-----------------------
Confidence 9998754110 0 00 00 0 000
Q ss_pred HHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh------hc----C----CCh
Q 020393 206 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW------CA----G----FGG 270 (326)
Q Consensus 206 ~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~------~~----~----~~~ 270 (326)
.++...+..+ ...+++|||++|+||+++ ++...+||+ .+..+++..|.+.-. .. . +-.
T Consensus 97 -~~i~~~l~~l-----H~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (199)
T TIGR03724 97 -REIGRLVGKL-----HKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEIEDKAVDLHVLKRSLESTHPDKAEELFE 169 (199)
T ss_pred -HHHHHHHHHH-----HHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCCcHHhhhchHHHHHHHHhhhCchhHHHHHH
Confidence 0001111111 124789999999999998 666899998 467888888876321 11 1 113
Q ss_pred HhHHHhhhhCCCC
Q 020393 271 SFYNSYFEVMPKQ 283 (326)
Q Consensus 271 ~fl~~Y~~~~~l~ 283 (326)
.|+++|.+..+.+
T Consensus 170 ~fl~~Y~~~~~~~ 182 (199)
T TIGR03724 170 AFLEGYREEFGEA 182 (199)
T ss_pred HHHHHHHhhcccH
Confidence 6778888655443
No 44
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=99.25 E-value=4.8e-10 Score=100.15 Aligned_cols=198 Identities=16% Similarity=0.143 Sum_probs=105.6
Q ss_pred eEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee-cCCC
Q 020393 53 KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI-EFGS 131 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l-~G~~ 131 (326)
.+.++. |.+|.+|++.-++.+.++|.........+..+. + +|+++..... +....++.++. .|..
T Consensus 10 ~~~~~~-g~t~~~~~~~~~g~~~~~~r~~~p~~~~~~~~~-----------~-~~~l~~~~~~-~~~~~~~~q~~~~~~~ 75 (269)
T COG0510 10 KITPLN-GLTGYAFRIEGEGTRVFLKRNFEPFLPALIFRL-----------I-VPKLLWLKRI-ANGGVLVAQYWENGRT 75 (269)
T ss_pred eeeecc-CCcceeEEeeCCCCeeeeecCCCcchHHHHHHh-----------h-hhhhhhhccc-ccCCceEEeeeccccc
Confidence 556665 788999999655557777765432211111111 1 1444433321 22333333433 3443
Q ss_pred CC---CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHH
Q 020393 132 SR---GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR 208 (326)
Q Consensus 132 ~~---~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 208 (326)
++ .....++..|+++|........+.. .......|..+.. .+......... ....+.+.+.+
T Consensus 76 l~~~~~~~~~ia~~L~~lH~~~~~~~~~~~-----------~~~~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~~~~~ 140 (269)
T COG0510 76 LTPEDMNLKKIAHILKKLHNSVPLLHQLPR-----------SGSSFIEPKDYLE--LLWQQNSRAYR--DNHLLRKKLKE 140 (269)
T ss_pred cCccccchHHHHHHHHHhcCccchHHHHHh-----------hcchHhhHHHHHH--HHHhhchHHhh--hhHHHHHHHHH
Confidence 43 4467888899999995542111110 0000123332221 11111111110 11223344555
Q ss_pred HHHHhcccccCCCCC-cceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhh-cCCCh----HhHHHhhhhCC
Q 020393 209 LMKNLAPLFEGVNVE-PCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWC-AGFGG----SFYNSYFEVMP 281 (326)
Q Consensus 209 l~~~~~~~l~~~~~~-~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~-~~~~~----~fl~~Y~~~~~ 281 (326)
+...+.... .+ .++||+|++++|+|.++.+...+||| .++.+||++|||.+.. ..+.. +.+..|.+..+
T Consensus 141 l~~~l~~~~----~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~~~DLA~~~~e~~~~~~~~~~~~~~~~~~~~ 216 (269)
T COG0510 141 LRRALEEVP----KDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDPAFDLAALLSEYIFNHNELEDLYSAYLEKYG 216 (269)
T ss_pred HHHHhhhcC----CCceeeecCCCCccceEEcCCCcEEEEecccCCCccHHHHHHHHHHHhccchhHHHHHHHHHHHhCC
Confidence 554444332 23 79999999999999988667999997 6999999999998754 22322 35566665555
Q ss_pred CC
Q 020393 282 KQ 283 (326)
Q Consensus 282 l~ 283 (326)
..
T Consensus 217 ~~ 218 (269)
T COG0510 217 FE 218 (269)
T ss_pred ch
Confidence 44
No 45
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.25 E-value=1.3e-10 Score=100.82 Aligned_cols=102 Identities=16% Similarity=0.083 Sum_probs=71.5
Q ss_pred cccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC---Ccch---------HHHHHHHHH
Q 020393 29 TFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSM---------FEGEALGLG 96 (326)
Q Consensus 29 ~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~---------~~~E~~~l~ 96 (326)
||.+=+.....+++.+. ++.+...++.+++|..+.||.++++.+++++|..++. .... ++.|+..+.
T Consensus 12 ~~~~~~~~~~~~~~~~~-l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~ 90 (232)
T PRK10359 12 VFYKDNDNKYKEIFDDF-LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTD 90 (232)
T ss_pred EEecCCcccHHHHHHHH-hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHH
Confidence 44333332234555555 4557778888899999999999887779999999742 1111 567888888
Q ss_pred HHHhcCCCCCcceeeecccC-----CCceEEEEeeecCCCC
Q 020393 97 AMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSS 132 (326)
Q Consensus 97 ~L~~~~~~~vP~~~~~~~~~-----~~~~~~v~e~l~G~~~ 132 (326)
.|.+. ++++|..+...... ++..+++|||++|.++
T Consensus 91 rL~~~-GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL 130 (232)
T PRK10359 91 RVRSE-GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVEL 130 (232)
T ss_pred HHHHC-CCCcceEeeeecccccccccCCeEEEEEEECCccH
Confidence 88665 79999887554321 3578999999999754
No 46
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=99.19 E-value=2.5e-10 Score=100.32 Aligned_cols=175 Identities=15% Similarity=0.113 Sum_probs=105.3
Q ss_pred HHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC-----CCcH---HHHHHHHHHHhhcCCCCC---CCCC
Q 020393 90 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----RGNQ---SVFGKKLAEMHKAGKSSK---GFGF 158 (326)
Q Consensus 90 ~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----~~~~---~~lg~~La~lH~~~~~~~---~fg~ 158 (326)
.=+++-.+|... ++.||+++..|. ...+++.|.+.-+.. .... ...++.|+.+|..+.+.. ..|-
T Consensus 69 ~Fvai~~lL~~~-Gv~vPqIla~Dl---d~GfllLedLG~e~~l~~~g~~~~ery~~a~~ll~~~h~~~~~~q~~~~~g~ 144 (351)
T COG3178 69 PFVAIAGLLAGQ-GVRVPQILAADL---DQGFLLLEDLGRETFLQALGEPIAERYAAADALLAAAHGALVPLQKAVREGS 144 (351)
T ss_pred HHHHHHHHHhcC-CcCccHHhhhch---hcCchhHhhcCcHHHHHhcCCCchhHHHHHHHHHHHHhcCcchhhcccCCCC
Confidence 335566677765 799999999885 588999998853321 2333 367789999999887521 1110
Q ss_pred CCCCcccccccCCCCCccHHHHHH-Hhhh--HHHHHHHHhhcCChHHHHHHHHHHHHhc-ccccCCCCCcceeecCCCCC
Q 020393 159 DVDNTIGSTPQINKWTSNWIEFYA-EHRL--GYQLKLALDQYGDSTIYQRGHRLMKNLA-PLFEGVNVEPCLLHGDLWSG 234 (326)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~w~~~~~-~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~l~~~~~~~~LiHgDl~~~ 234 (326)
.-.+|.- + ++... +..+ +.++........+...++.+++..+.+- .++ ..+.++||.|+|+.
T Consensus 145 -----~~~lp~f----D--r~am~~E~sLf~dWylpr~~g~~l~~~~r~~~~aiwd~Lid~~~---~~~~vlvhRDfh~~ 210 (351)
T COG3178 145 -----THVLPPF----D--RAAMRREASLFVDWYLPRHLGRPLTDAERQAWEAIWDGLIDSLL---AQPKVLVHRDFHSR 210 (351)
T ss_pred -----CCcCCcc----c--HHHHHHHHHhhHHhhhHHHhCCCCCHHHHHHHHHHHHHHHHHHh---cCCceeeeccccCc
Confidence 0011110 0 00000 0001 1111111111123333455555555432 222 36889999999999
Q ss_pred CeeecCC----CCeEEEcc-ccccCchhhhhhhhhh---cCCC----hHhHHHhhhhCCC
Q 020393 235 NISSDKN----GEPVILDP-ACYYGHNEAEFGMSWC---AGFG----GSFYNSYFEVMPK 282 (326)
Q Consensus 235 NiL~~~~----~~~~iID~-~~~~G~~~~Dla~~~~---~~~~----~~fl~~Y~~~~~l 282 (326)
|+|+..+ ..+||||| ++.+|+..||++.+.. -.++ .+++.+|.+.+..
T Consensus 211 NLmw~~~~~g~~rvGvlDFQDA~iGP~aYDvasL~~DArvt~~pe~~~~~l~rY~~~r~~ 270 (351)
T COG3178 211 NLMWTADRAGADRVGVLDFQDALIGPIAYDVASLLRDARVTWSPERELALLDRYWAARRA 270 (351)
T ss_pred cceecCCccCCCCCceeehhhhhcCcchhhHHHHHhhccccCCHHHHHHHHHHHHHhhhh
Confidence 9999877 25899996 8999999999998732 2333 4789999988753
No 47
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=2.2e-10 Score=94.57 Aligned_cols=153 Identities=18% Similarity=0.173 Sum_probs=98.8
Q ss_pred eCCccccceEEEEeCCccEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 57 VGGGCINLASRYGTDAGSFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~~~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
+..|..+.+|+...-+.+.|+|.-.+. .......|+.++..+... ++|+|.++..+. +...++||
T Consensus 4 i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~---~~~~I~me 79 (204)
T COG3642 4 IKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDP---DNGLIVME 79 (204)
T ss_pred hhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcC---CCCEEEEE
Confidence 456777777877665557888875431 123456899999999886 899999999884 58899999
Q ss_pred eecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 020393 126 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 205 (326)
Q Consensus 126 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 205 (326)
|++|..+....... .. +.. ..+.
T Consensus 80 ~I~G~~lkd~l~~~----------~~---------------------------~~~--r~vG------------------ 102 (204)
T COG3642 80 YIEGELLKDALEEA----------RP---------------------------DLL--REVG------------------ 102 (204)
T ss_pred EeCChhHHHHHHhc----------ch---------------------------HHH--HHHH------------------
Confidence 99997531110000 00 000 0011
Q ss_pred HHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cccCchhhhhhh----hh--hc----C---CChH
Q 020393 206 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM----SW--CA----G---FGGS 271 (326)
Q Consensus 206 ~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G~~~~Dla~----~~--~~----~---~~~~ 271 (326)
+.+.. + ....+|||||.+.|+++..++ +.+|||. +.+.+-.-|.|+ +. .. . +..+
T Consensus 103 --~~vg~---l-----H~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~Ed~aVDl~Vleral~sth~~~e~l~~~ 171 (204)
T COG3642 103 --RLVGK---L-----HKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVEDKAVDLHVLERALESTHEKAEELFAA 171 (204)
T ss_pred --HHHHH---H-----HhcCeecCCCccceEEEeCCc-EEEEECCcccccccHHhhhchHHHHHHHHHhccccHHHHHHH
Confidence 11111 1 234899999999999997665 8999984 567776666663 21 11 1 2258
Q ss_pred hHHHhhhhCC
Q 020393 272 FYNSYFEVMP 281 (326)
Q Consensus 272 fl~~Y~~~~~ 281 (326)
|++||.+...
T Consensus 172 f~~gY~~~~~ 181 (204)
T COG3642 172 FLEGYREEFG 181 (204)
T ss_pred HHHHHHHHhc
Confidence 9999977654
No 48
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.16 E-value=4.2e-10 Score=96.87 Aligned_cols=157 Identities=17% Similarity=0.152 Sum_probs=99.8
Q ss_pred eEeCCccccceEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 55 CPVGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
+.++.|..+.+|+....+..+++|...... ...+..|.+++..+... ++++|.++..+ .+..+++
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~lv 77 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVD---PENFIIV 77 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEe---CCCCEEE
Confidence 457888899999998777789999765321 12355788888888764 68999998765 3578999
Q ss_pred EeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393 124 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 203 (326)
Q Consensus 124 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 203 (326)
|||++|.++... +. . .. + . . ..+.
T Consensus 78 ~e~~~G~~L~~~-------~~---~-~~-------------------------~-~-~--~~i~---------------- 101 (211)
T PRK14879 78 MEYIEGEPLKDL-------IN---S-NG-------------------------M-E-E--LELS---------------- 101 (211)
T ss_pred EEEeCCcCHHHH-------HH---h-cc-------------------------H-H-H--HHHH----------------
Confidence 999999765211 10 0 00 0 0 0 0000
Q ss_pred HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh---h-------cCC----
Q 020393 204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW---C-------AGF---- 268 (326)
Q Consensus 204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~---~-------~~~---- 268 (326)
..+...+..+ ...+++|||++|+|||++ ++...+||| .+..+++..|.+.-. + ..+
T Consensus 102 ---~~i~~~l~~l-----H~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (211)
T PRK14879 102 ---REIGRLVGKL-----HSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSKDLEDRAVDLHVLLRSLESTHPDWAEEL 172 (211)
T ss_pred ---HHHHHHHHHH-----HhCCcccCCCCcccEEEE-CCCEEEEECCcccCCCcHHhhhccHHHHHHHhhccCcchHHHH
Confidence 1111111111 124789999999999998 556899998 567888888876421 1 111
Q ss_pred ChHhHHHhhhhC
Q 020393 269 GGSFYNSYFEVM 280 (326)
Q Consensus 269 ~~~fl~~Y~~~~ 280 (326)
-+.|+++|.+..
T Consensus 173 ~~~f~~gY~~~~ 184 (211)
T PRK14879 173 FEAFLEGYREVM 184 (211)
T ss_pred HHHHHHHHHHhh
Confidence 136788888755
No 49
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=99.13 E-value=6.7e-10 Score=97.51 Aligned_cols=200 Identities=15% Similarity=0.159 Sum_probs=123.9
Q ss_pred HHHHHHhcCCCc--ceeeEeEeCCccccceEEEEeCC---ccEEEEecCCCCcchH--HHHHHHHHHHHhcCCCCCccee
Q 020393 38 IREWILSEGKAT--HITKICPVGGGCINLASRYGTDA---GSFFVKTNRSIGPSMF--EGEALGLGAMYETRTIRAPRPF 110 (326)
Q Consensus 38 i~~~l~~~~~~~--~v~~v~~l~~G~~n~~y~v~~~~---~~~vlK~~~~~~~~~~--~~E~~~l~~L~~~~~~~vP~~~ 110 (326)
+.++|++.-+.+ .-++.+..++|.+|..+....++ ..+.+|++...+.-.+ +.|+...+.|++++ -.|+++
T Consensus 68 a~eLlk~Lrp~W~~~~v~~~~fs~gitNkL~~~~vg~~~e~~v~vrvyg~~te~vIdre~Ev~afk~L~a~G--~ap~Ly 145 (391)
T KOG4720|consen 68 ALELLKKLRPHWKPPEVTFKRFSDGITNKLFSCYVGENMEDHVLVRVYGHNTELVIDRENEVIAFKLLAAYG--FAPKLY 145 (391)
T ss_pred HHHHHHHhcccCCccceeeeeeccchhHHHHHhhcccccceeEEEEeccCCCceeeccHHHHHHHHHHHHcC--cChhhh
Confidence 445666654433 33556678899988776655443 3688898876433222 45666777888863 477787
Q ss_pred eecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHH
Q 020393 111 KVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE 183 (326)
Q Consensus 111 ~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~ 183 (326)
..- .-.++++|++|..+. +.++.+++.+|+||+.... | ..|...-|. ....|+..
T Consensus 146 ~tF-----~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~----g--------~~pkp~lw~-km~~f~~l 207 (391)
T KOG4720|consen 146 GTF-----NNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVAT----G--------GNPKPPLWE-KMRKFLQL 207 (391)
T ss_pred hee-----cCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccC----C--------CCCCCcHHH-HHHHHHHh
Confidence 653 347999999999873 5679999999999998873 1 112222221 11222210
Q ss_pred hhhHHHH-HHHHhhc----CC-hHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCC-CeEEEc-cccccCc
Q 020393 184 HRLGYQL-KLALDQY----GD-STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILD-PACYYGH 255 (326)
Q Consensus 184 ~~l~~~~-~~~~~~~----~~-~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-~~~iID-~~~~~G~ 255 (326)
+.... ++..++. .. ..+.+.+.++ .+.+..+..|.++||.||=.+||+.++.. ..-+|| +.+.+..
T Consensus 208 --v~~~f~de~~kq~~~~~~~~~~L~~Ei~~l----~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDYEYa~yNY 281 (391)
T KOG4720|consen 208 --VPTSFEDEINKQNLFDEPSPEDLGEEISKL----KEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDYEYAGYNY 281 (391)
T ss_pred --cCchhhcccchhhcccCCCHHHHHHHHHHH----HHHHHhhCCCeEEeecchhhcceeeccccCcEEEEeecccccch
Confidence 10000 0101111 11 1233333333 33333335788999999999999998764 467999 5799999
Q ss_pred hhhhhhhh
Q 020393 256 NEAEFGMS 263 (326)
Q Consensus 256 ~~~Dla~~ 263 (326)
.++||+--
T Consensus 282 ~afDIgNH 289 (391)
T KOG4720|consen 282 QAFDIGNH 289 (391)
T ss_pred hheehhhh
Confidence 99999954
No 50
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.10 E-value=1.5e-09 Score=95.65 Aligned_cols=71 Identities=18% Similarity=0.123 Sum_probs=53.3
Q ss_pred CccccceEEEEeCCccEEEEecCCC----------------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCC---Cc
Q 020393 59 GGCINLASRYGTDAGSFFVKTNRSI----------------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GG 119 (326)
Q Consensus 59 ~G~~n~~y~v~~~~~~~vlK~~~~~----------------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~---~~ 119 (326)
.|..|++|+|.++++++|||.+... .......|.+++..|... +++||+++....... ..
T Consensus 42 ~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-gi~vP~pl~~~~~~~~~~~~ 120 (239)
T PRK01723 42 AKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-GLPVPRPIAARVVRHGLFYR 120 (239)
T ss_pred CCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-CCCCceeEeeeeeecCccee
Confidence 5678999999999889999987421 113356799999999876 699999998643322 24
Q ss_pred eEEEEeeecCC
Q 020393 120 SYIIMEFIEFG 130 (326)
Q Consensus 120 ~~~v~e~l~G~ 130 (326)
.++|||+++|.
T Consensus 121 ~~lV~e~l~G~ 131 (239)
T PRK01723 121 ADILIERIEGA 131 (239)
T ss_pred eeEEEEecCCC
Confidence 46999999984
No 51
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.98 E-value=6e-09 Score=85.99 Aligned_cols=75 Identities=24% Similarity=0.165 Sum_probs=58.6
Q ss_pred eEeEeCCccccceEEEEeCCccEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 53 KICPVGGGCINLASRYGTDAGSFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
+++.+.+|....+++.......+++|.-++. .+.....|+++|..+... ++++|+++..|. ....
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~---~~~~ 86 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDT---YGGQ 86 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEec---CCCe
Confidence 6777888988888888777778888865431 134456799999888875 899999999884 5889
Q ss_pred EEEeeecCCC
Q 020393 122 IIMEFIEFGS 131 (326)
Q Consensus 122 ~v~e~l~G~~ 131 (326)
+.|||++|.+
T Consensus 87 i~ME~~~g~~ 96 (229)
T KOG3087|consen 87 IYMEFIDGAS 96 (229)
T ss_pred EEEEeccchh
Confidence 9999998843
No 52
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=98.95 E-value=3.4e-08 Score=95.58 Aligned_cols=194 Identities=15% Similarity=0.162 Sum_probs=108.4
Q ss_pred EeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccC--CC---ceEEEEeeec
Q 020393 54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TG---GSYIIMEFIE 128 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~---~~~~v~e~l~ 128 (326)
++.+++.++|+...+ ++++|+|+++.-... ..=|.++.++|.+.+.-.||.+++.-... ++ .-.++.+|++
T Consensus 170 ~r~l~~EQSNtSi~~---g~~~ilKlyRrl~~G-~nPe~E~~r~Lte~gf~~vP~llG~v~~~~~~g~~~tla~lq~fV~ 245 (528)
T TIGR02457 170 VRLLSAEQSNSSLVV---GDRVVLKLYRKVEPG-INPEIEMGRYLTAAGYANIPPLLGSVERVGGDQAPHTLGLLQGYVQ 245 (528)
T ss_pred eeecCCCcCceEEEE---CCEEEEEEecccCCC-CCcchHHHHHHHhCCCccCCcccEEEEEEcCCCCEEeeehHhhhhC
Confidence 455666677777776 357999999862211 12357778889886545799999874321 23 3456668888
Q ss_pred CCCC---------C-------------------------CcHHHHHHHHHHHhhcCCCC---CCCCCCCCCcccccccCC
Q 020393 129 FGSS---------R-------------------------GNQSVFGKKLAEMHKAGKSS---KGFGFDVDNTIGSTPQIN 171 (326)
Q Consensus 129 G~~~---------~-------------------------~~~~~lg~~La~lH~~~~~~---~~fg~~~~~~~~~~~~~~ 171 (326)
+... . ..++.+|+.+|.||...... +.|+-. |...
T Consensus 246 nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~aLA~~~~~~aF~pe--------p~~~ 317 (528)
T TIGR02457 246 NQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLALAAGGEDPAFAPE--------PIST 317 (528)
T ss_pred CCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC--------CCCH
Confidence 6531 0 11577999999999988743 123210 1111
Q ss_pred CCCccHHHHHHHhhhHHHHHHHHhh--cCChHHHHHH-------HHHHHHhcccccCCCCCcce---eecCCCCCCeeec
Q 020393 172 KWTSNWIEFYAEHRLGYQLKLALDQ--YGDSTIYQRG-------HRLMKNLAPLFEGVNVEPCL---LHGDLWSGNISSD 239 (326)
Q Consensus 172 ~~~~~w~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~-------~~l~~~~~~~l~~~~~~~~L---iHgDl~~~NiL~~ 239 (326)
.....|.+... .++...++...+. ..++...+.. +++.+.+..+.. ....++ ||||+|.||+|+.
T Consensus 318 ~~~~~~~~~~~-~~~~~a~~~L~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~--~~~~~~k~RiHGD~HLgqvL~t 394 (528)
T TIGR02457 318 LYQRSWYQDMR-AQAERALQLLAQSRDGLPAAARALADRLLAQRKELAAHLRPLVK--REIDGLKIRIHGDFHLGQVLVV 394 (528)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhh--cCCCcceEeEecCcchhcEEEe
Confidence 11123322221 1222222222111 1122222222 223333333332 233456 9999999999998
Q ss_pred CCCCeEEEccc--c--------ccCchhhhhh-hh
Q 020393 240 KNGEPVILDPA--C--------YYGHNEAEFG-MS 263 (326)
Q Consensus 240 ~~~~~~iID~~--~--------~~G~~~~Dla-~~ 263 (326)
+++ ..||||+ . ....|..|+| |+
T Consensus 395 ~~d-~~IiDFEGEP~Rpl~ERR~k~sPLRDVAGML 428 (528)
T TIGR02457 395 QDD-AVLIDFEGEPARPLAERRAKRSPLRDVAGML 428 (528)
T ss_pred CCC-eEEEcCCCCCCCChHHhccCCChHHHHHHHH
Confidence 776 6699963 2 2567889998 44
No 53
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=98.93 E-value=2.6e-09 Score=91.22 Aligned_cols=58 Identities=22% Similarity=0.379 Sum_probs=44.1
Q ss_pred CCcceeecCCCCCCeeecCCC-----CeEEEcc-ccccCchhhhhhhhhhcCC--------ChHhHHHhhhh
Q 020393 222 VEPCLLHGDLWSGNISSDKNG-----EPVILDP-ACYYGHNEAEFGMSWCAGF--------GGSFYNSYFEV 279 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~-----~~~iID~-~~~~G~~~~Dla~~~~~~~--------~~~fl~~Y~~~ 279 (326)
...+|||||+|++|+++..++ ..++||| .+.+|+|.+||+.+.+... .+.+++.|.+.
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~~~~~r~~~~~~ll~~Y~~~ 189 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSLSVEIRREHFDELLKFYYET 189 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467999999999999998543 4689997 6899999999997632211 24677777653
No 54
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.91 E-value=7.1e-09 Score=101.97 Aligned_cols=162 Identities=16% Similarity=0.148 Sum_probs=101.0
Q ss_pred EeEeCCccccceEEEEeCCccEEEEecCC-----C------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 54 ICPVGGGCINLASRYGTDAGSFFVKTNRS-----I------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~-----~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
.+.++.|.+..||+....+...++|.... . ....+..|.++++.+... ++++|.++..+ ....++
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~l 413 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA-GVPTPVIYDVD---PEEKTI 413 (535)
T ss_pred cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc-CCCeeEEEEEe---CCCCEE
Confidence 46688999999999877666656554321 0 013356799999988765 57777776655 356799
Q ss_pred EEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHH
Q 020393 123 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI 202 (326)
Q Consensus 123 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~ 202 (326)
+|||++|.++..... .. . . +.
T Consensus 414 v~E~~~g~~L~~~l~-------------~~----------------------~---~-~~-------------------- 434 (535)
T PRK09605 414 VMEYIGGKDLKDVLE-------------GN----------------------P---E-LV-------------------- 434 (535)
T ss_pred EEEecCCCcHHHHHH-------------HH----------------------H---H-HH--------------------
Confidence 999999976522111 00 0 0 00
Q ss_pred HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh------hcC-------C
Q 020393 203 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW------CAG-------F 268 (326)
Q Consensus 203 ~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~------~~~-------~ 268 (326)
.++.+.+..+ ....+||+|++|+|||++ ++...|||| .+..+++..|++... +.+ .
T Consensus 435 ----~~i~~~L~~l-----H~~giiHrDlkp~NILl~-~~~~~liDFGla~~~~~~~d~a~~l~~~~~~~~~~~~~~~~~ 504 (535)
T PRK09605 435 ----RKVGEIVAKL-----HKAGIVHGDLTTSNFIVR-DDRLYLIDFGLGKYSDLIEDKAVDLHVLKQSLESTHYDFEEL 504 (535)
T ss_pred ----HHHHHHHHHH-----HhCCCccCCCChHHEEEE-CCcEEEEeCcccccCCchHhhhhhHHHHHHHhcCCCCCHHHH
Confidence 0001111111 124799999999999994 556889998 578899999987531 111 1
Q ss_pred ChHhHHHhhhhCCCCcCHHHH
Q 020393 269 GGSFYNSYFEVMPKQPGFEKR 289 (326)
Q Consensus 269 ~~~fl~~Y~~~~~l~~~~~~r 289 (326)
.+.|+++|... +..+++.++
T Consensus 505 ~~~fl~gY~~~-~~~~~~~~~ 524 (535)
T PRK09605 505 WEAFLEGYRET-EGAEDVLER 524 (535)
T ss_pred HHHHHHhhccC-ccHHHHHHH
Confidence 24789999766 444444443
No 55
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.90 E-value=1.5e-08 Score=96.98 Aligned_cols=100 Identities=17% Similarity=0.099 Sum_probs=68.1
Q ss_pred cCCCchhHHHHHHhcCCCcce------eeEeEeCCccccceEEEEeCCc-cEEEEecCCCCcch----------------
Q 020393 31 ATLSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSM---------------- 87 (326)
Q Consensus 31 ~~~~~~~i~~~l~~~~~~~~v------~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~---------------- 87 (326)
.|++++++++.+.+. +|..+ .+-+|++.|..++||+-+..+| ++++|+.++.-...
T Consensus 94 ~p~~~~~~~~~l~~e-lg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~ 172 (437)
T TIGR01982 94 PPFDFKVARKVIEAA-LGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVE 172 (437)
T ss_pred CCCCHHHHHHHHHHH-hCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHH
Confidence 467889999999876 33222 2336799999999999998766 79999986532111
Q ss_pred ---------------------------HHHHHHHHHHHHh----cCCCCCcceeeecccCCCceEEEEeeecCCCCCC
Q 020393 88 ---------------------------FEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRG 134 (326)
Q Consensus 88 ---------------------------~~~E~~~l~~L~~----~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~ 134 (326)
+..|++.+..+++ ...+.+|+++... .+..+++|||++|.++..
T Consensus 173 ~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~vLvmE~i~G~~L~~ 247 (437)
T TIGR01982 173 RLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDR---TSERVLTMEWIDGIPLSD 247 (437)
T ss_pred HhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhh---cCCceEEEEeECCccccc
Confidence 2234444444432 2357889988644 357899999999987743
No 56
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.89 E-value=8.4e-09 Score=90.21 Aligned_cols=136 Identities=21% Similarity=0.227 Sum_probs=93.9
Q ss_pred eEeCCccccceEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCCCCCcc
Q 020393 55 CPVGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRTIRAPR 108 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~~~vP~ 108 (326)
.++|-|=.+.+|...+++| ++++|+.+.. ++...+.|.++|+.|... |++||+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-G~~VP~ 175 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-GVKVPK 175 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc-CCCCCC
Confidence 5677888999999988755 8999987531 112246799999999986 799999
Q ss_pred eeeecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHH
Q 020393 109 PFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGY 188 (326)
Q Consensus 109 ~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ 188 (326)
|+.+. .++++||+++|.++...- + .. .+ ..
T Consensus 176 P~~~n-----RHaVvMe~ieG~eL~~~r---------~---~~-----------------------en---------~~- 205 (304)
T COG0478 176 PIAWN-----RHAVVMEYIEGVELYRLR---------L---DV-----------------------EN---------PD- 205 (304)
T ss_pred ccccc-----cceeeeehcccceeeccc---------C---cc-----------------------cC---------HH-
Confidence 99775 789999999997652100 0 00 00 00
Q ss_pred HHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-c-cccCchhhhhh
Q 020393 189 QLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-A-CYYGHNEAEFG 261 (326)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~-~~~G~~~~Dla 261 (326)
+.++.+++.+.... ..++|||||..-||++++||...+||| . ...+||-++.-
T Consensus 206 ---------------~il~~il~~~~~~~-----~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~~hp~a~e~ 260 (304)
T COG0478 206 ---------------EILDKILEEVRKAY-----RRGIVHGDLSEFNILVTEDGDIVVIDWPQAVPISHPDAEEL 260 (304)
T ss_pred ---------------HHHHHHHHHHHHHH-----HcCccccCCchheEEEecCCCEEEEeCcccccCCCCCHHHH
Confidence 11112222222211 358999999999999999988999995 5 46888876644
No 57
>PRK09902 hypothetical protein; Provisional
Probab=98.87 E-value=6.3e-08 Score=82.58 Aligned_cols=179 Identities=11% Similarity=0.072 Sum_probs=108.0
Q ss_pred hhHHHHHHhcCCCcceeeEeEeC--CccccceEEEEeCCccEEEEecCC---------CCcchHHHHHHHHHHHHhcCCC
Q 020393 36 DPIREWILSEGKATHITKICPVG--GGCINLASRYGTDAGSFFVKTNRS---------IGPSMFEGEALGLGAMYETRTI 104 (326)
Q Consensus 36 ~~i~~~l~~~~~~~~v~~v~~l~--~G~~n~~y~v~~~~~~~vlK~~~~---------~~~~~~~~E~~~l~~L~~~~~~ 104 (326)
+++..|-+.. ..=|++.. .|..+.|++++..+..|++|.... -.+..+..|...|+.|.+. ++
T Consensus 8 ~~f~~~w~~~-----~~wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~-Gv 81 (216)
T PRK09902 8 DEFNHWWATE-----GDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERA-GV 81 (216)
T ss_pred hhHHHHHhCC-----CceecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHc-CC
Confidence 4555555443 22233443 367899999998777899998762 2345688999999999997 79
Q ss_pred CCcceeeecccCC---CceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHH
Q 020393 105 RAPRPFKVGALPT---GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFY 181 (326)
Q Consensus 105 ~vP~~~~~~~~~~---~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~ 181 (326)
|||+|+..+..+. -..++|++.++|-.. |..+-.... .. .+... .
T Consensus 82 PVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~----------L~~~l~~~~----~~--------------~~~~~----~ 129 (216)
T PRK09902 82 IVPKIVFGEAVKIEGEWRALLVTEDMAGFIS----------IADWYAQHA----VS--------------PYSDE----V 129 (216)
T ss_pred CCCccceeeeeccCCceEEEEEEEeCCCCcc----------HHHHHhcCC----cC--------------CcchH----H
Confidence 9999996654321 257889999988533 222211110 00 00000 0
Q ss_pred HHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCC--eEEEccc-cc-----c
Q 020393 182 AEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE--PVILDPA-CY-----Y 253 (326)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~--~~iID~~-~~-----~ 253 (326)
. ...+.++.+.+..+ ...+++|||+.+.||+++.++. ..+||++ +. .
T Consensus 130 -k-------------------~~il~~va~~ia~L-----H~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~l~~~ 184 (216)
T PRK09902 130 -R-------------------QAMLKAVALAFKKM-----HSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRD 184 (216)
T ss_pred -H-------------------HHHHHHHHHHHHHH-----HHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchhhhhh
Confidence 0 01122222222222 2458999999999999986666 7899953 32 3
Q ss_pred Cchhhhhhhhh-h-cCCCh----HhHHHhh
Q 020393 254 GHNEAEFGMSW-C-AGFGG----SFYNSYF 277 (326)
Q Consensus 254 G~~~~Dla~~~-~-~~~~~----~fl~~Y~ 277 (326)
....-||..+. . .++++ .|+.+|-
T Consensus 185 ~~~~~Dl~~l~r~~~~~s~~~~~~~~~~y~ 214 (216)
T PRK09902 185 KAINHDFRQLEKYLEPIPKADWEQVKAYYY 214 (216)
T ss_pred hhhHhHHHHHHHhccCCCHHHHHHHHHHHh
Confidence 44466877664 2 44653 4677774
No 58
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.84 E-value=6.2e-08 Score=86.53 Aligned_cols=65 Identities=22% Similarity=0.212 Sum_probs=49.0
Q ss_pred eEEEEeCCccEEEEecCCCC------------c--chHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEEEEee
Q 020393 65 ASRYGTDAGSFFVKTNRSIG------------P--SMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIMEF 126 (326)
Q Consensus 65 ~y~v~~~~~~~vlK~~~~~~------------~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v~e~ 126 (326)
|++++.++..|++|.+.... . .....|...+..|.+. ++|||+|+..+... ....++|+|+
T Consensus 38 vvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~~~~~s~LVte~ 116 (268)
T PRK15123 38 TLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-GVDTMTGVAFGERGSNPATRTSFIITED 116 (268)
T ss_pred EEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-CCCCCCeeEEEEecCCCccceeEEEEee
Confidence 67888877789999774321 0 1256899999999987 79999998876432 2358999999
Q ss_pred ecCC
Q 020393 127 IEFG 130 (326)
Q Consensus 127 l~G~ 130 (326)
++|.
T Consensus 117 l~~~ 120 (268)
T PRK15123 117 LAPT 120 (268)
T ss_pred CCCC
Confidence 9985
No 59
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.76 E-value=1.3e-07 Score=80.20 Aligned_cols=71 Identities=23% Similarity=0.260 Sum_probs=52.1
Q ss_pred eEeCCccccceEEEEeCCc-cEEEEecCCCCc-----------------------------chHHHHHHHHHHHHhcCCC
Q 020393 55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGP-----------------------------SMFEGEALGLGAMYETRTI 104 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~-----------------------------~~~~~E~~~l~~L~~~~~~ 104 (326)
.+++.|....||+....+| .+++|+.+.... ...+.|.+.+..+... ++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i 81 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA-GV 81 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 4678899999999987544 788998764210 0124678888888765 68
Q ss_pred CCcceeeecccCCCceEEEEeeecCCC
Q 020393 105 RAPRPFKVGALPTGGSYIIMEFIEFGS 131 (326)
Q Consensus 105 ~vP~~~~~~~~~~~~~~~v~e~l~G~~ 131 (326)
++|.++... ..+++|||++|..
T Consensus 82 ~~p~~~~~~-----~~~lVmE~~~g~~ 103 (190)
T cd05145 82 PVPEPILLK-----KNVLVMEFIGDDG 103 (190)
T ss_pred CCceEEEec-----CCEEEEEEecCCC
Confidence 889988654 3489999999863
No 60
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.68 E-value=1.5e-07 Score=79.87 Aligned_cols=71 Identities=20% Similarity=0.153 Sum_probs=50.7
Q ss_pred EeCCccccceEEEEeCCc-cEEEEecCCCC---c---------ch-----------------HHHHHHHHHHHHhcCCCC
Q 020393 56 PVGGGCINLASRYGTDAG-SFFVKTNRSIG---P---------SM-----------------FEGEALGLGAMYETRTIR 105 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~---------~~-----------------~~~E~~~l~~L~~~~~~~ 105 (326)
.++.|....||+....+| .+++|+.+... . .. ...|.+.+..|... +++
T Consensus 4 ~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~v~ 82 (190)
T cd05147 4 CISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA-GIP 82 (190)
T ss_pred ccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC-CCC
Confidence 477889999999987655 78999875321 0 11 12488899999765 577
Q ss_pred CcceeeecccCCCceEEEEeeecCCCC
Q 020393 106 APRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 106 vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
+|.++... ..+++|||++|..+
T Consensus 83 ~p~~~~~~-----~~~iVmE~i~g~~l 104 (190)
T cd05147 83 CPEPILLK-----SHVLVMEFIGDDGW 104 (190)
T ss_pred CCcEEEec-----CCEEEEEEeCCCCC
Confidence 88877543 34999999998643
No 61
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.66 E-value=6.9e-08 Score=81.57 Aligned_cols=39 Identities=26% Similarity=0.431 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec--CCCC
Q 020393 88 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE--FGSS 132 (326)
Q Consensus 88 ~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~--G~~~ 132 (326)
.++|.+.|..+.+. +++||+|+... ..+++|||++ |.++
T Consensus 55 ~~~E~~~L~~l~~~-Gv~vP~p~~~~-----~~~ivME~I~~~G~~~ 95 (188)
T PF01163_consen 55 AKKEFRNLKRLYEA-GVPVPKPYDYN-----RNVIVMEYIGEDGVPL 95 (188)
T ss_dssp HHHHHHHHHHCCCT-T-SS--EEEEE-----TTEEEEE--EETTEEG
T ss_pred HHHHHHHHHHHHHC-CccCCcEEEEe-----CCEEEEEecCCCccch
Confidence 45799999988876 79999999775 5699999999 6543
No 62
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.65 E-value=3e-07 Score=78.11 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393 90 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 131 (326)
Q Consensus 90 ~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 131 (326)
+|.+.|+.+.+. ++|||+|+... ..+++||++.|..
T Consensus 75 kE~r~L~rl~~~-Gv~vP~pi~~~-----~~~lvME~Ig~~~ 110 (197)
T cd05146 75 KEMHNLKRMQKA-GIPCPEVVVLK-----KHVLVMSFIGDDQ 110 (197)
T ss_pred HHHHHHHHHHHc-CCCCCeEEEec-----CCEEEEEEcCCCC
Confidence 899999999987 79999999764 6799999998753
No 63
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.65 E-value=8e-07 Score=76.22 Aligned_cols=102 Identities=14% Similarity=0.055 Sum_probs=59.4
Q ss_pred cccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCc------------chHHHHHHHHH
Q 020393 29 TFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP------------SMFEGEALGLG 96 (326)
Q Consensus 29 ~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~------------~~~~~E~~~l~ 96 (326)
||..=+.+...+++.+. ...+...++-+.+..-|.|.+|+++++.||+|.+++..+ .....+...+.
T Consensus 12 vy~~e~~~~y~~l~~~i-~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~ 90 (229)
T PF06176_consen 12 VYYKENDEKYLELGEKI-LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTD 90 (229)
T ss_pred EEEecCchHHHHHHHHH-HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHH
Confidence 34333334555556555 333455555566667889999999999999999976321 11122333334
Q ss_pred HHHhcCCCCCccee-eecccC----CCceEEEEeeecCCCC
Q 020393 97 AMYETRTIRAPRPF-KVGALP----TGGSYIIMEFIEFGSS 132 (326)
Q Consensus 97 ~L~~~~~~~vP~~~-~~~~~~----~~~~~~v~e~l~G~~~ 132 (326)
.+.+. ++..|..+ ....-. ....+++|||++|.++
T Consensus 91 ~i~~~-g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l 130 (229)
T PF06176_consen 91 KIRNE-GFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVEL 130 (229)
T ss_pred HHHHc-CccccccceeeeeeeeccceeEEEEEEEEecCeec
Confidence 44443 45444432 221111 2456789999999876
No 64
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.64 E-value=2.7e-07 Score=89.86 Aligned_cols=99 Identities=15% Similarity=0.065 Sum_probs=68.1
Q ss_pred cCCCchhHHHHHHhc-CCCc-ce---eeEeEeCCccccceEEEEeCC-c-cEEEEecCCCCc------------------
Q 020393 31 ATLSDDPIREWILSE-GKAT-HI---TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIGP------------------ 85 (326)
Q Consensus 31 ~~~~~~~i~~~l~~~-~~~~-~v---~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~~------------------ 85 (326)
.|++.+++++.+.+. |... ++ .+.+|++.|...+||+.+..+ | ++++|+-++.-.
T Consensus 96 pp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~ 175 (537)
T PRK04750 96 PPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVE 175 (537)
T ss_pred CCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHH
Confidence 367788999999876 3211 11 244789999999999998865 5 799998864210
Q ss_pred -------------------------chHHHHHHHHHHHHhc----CCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 86 -------------------------SMFEGEALGLGAMYET----RTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 86 -------------------------~~~~~E~~~l~~L~~~----~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
-.+..|++.+..+++. ..+.||+++..- .+..+++|||++|.++
T Consensus 176 ~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~---st~~VLvmE~i~G~~l 248 (537)
T PRK04750 176 RLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY---CSETVMVMERMYGIPV 248 (537)
T ss_pred HhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc---CCCceEEEeeecCccH
Confidence 0133455555555432 347899999754 3588999999999876
No 65
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.61 E-value=5.6e-07 Score=76.80 Aligned_cols=73 Identities=21% Similarity=0.163 Sum_probs=51.9
Q ss_pred EeEeCCccccceEEEEeCCc-cEEEEecCCCC-------------------------cchHHHHHHHHHHHHhcCCCCCc
Q 020393 54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-------------------------PSMFEGEALGLGAMYETRTIRAP 107 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~-------------------------~~~~~~E~~~l~~L~~~~~~~vP 107 (326)
.++++.|....+|+....++ .+++|..+... ......|..++..+... ++++|
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~v~ 98 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE-GFPVP 98 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-CCCCC
Confidence 35688899999999987554 78889754210 01245677788888664 47889
Q ss_pred ceeeecccCCCceEEEEeeecCCCC
Q 020393 108 RPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 108 ~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
.++.. +..+++|||++|.++
T Consensus 99 ~~~~~-----~~~~lv~e~~~g~~L 118 (198)
T cd05144 99 KPIDW-----NRHAVVMEYIDGVEL 118 (198)
T ss_pred ceeec-----CCceEEEEEeCCcch
Confidence 88854 356999999999654
No 66
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.61 E-value=2.5e-07 Score=89.43 Aligned_cols=97 Identities=20% Similarity=0.160 Sum_probs=69.5
Q ss_pred CCCchhHHHHHHhcCCCcce------eeEeEeCCccccceEEEEeCCc-cEEEEecCCCC--------------------
Q 020393 32 TLSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-------------------- 84 (326)
Q Consensus 32 ~~~~~~i~~~l~~~~~~~~v------~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~-------------------- 84 (326)
|.+.+++.+.+.+. +|.++ .+-+|++.+...+||+-+..+| .++||+.++.-
T Consensus 103 p~~~~~~~~iie~e-LG~~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~ 181 (517)
T COG0661 103 PFPFEEAERIIEEE-LGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKR 181 (517)
T ss_pred CCCHHHHHHHHHHH-hCCCHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHH
Confidence 56778889888877 44222 2446788888999999999866 79999987630
Q ss_pred --c---------------------chHHHHHHHHHHHHhc----CCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 85 --P---------------------SMFEGEALGLGAMYET----RTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 85 --~---------------------~~~~~E~~~l~~L~~~----~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
+ -.+..|+..++.++++ ..+.||+|++.- .+...++|||++|.+.
T Consensus 182 ~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~---t~~~VLtmE~i~Gi~i 253 (517)
T COG0661 182 LPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEY---TTRRVLTMEWIDGIKI 253 (517)
T ss_pred cCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhc---cCCcEEEEEeeCCEec
Confidence 0 0023566666666543 457899999755 3688999999999876
No 67
>smart00090 RIO RIO-like kinase.
Probab=98.59 E-value=7.5e-07 Score=78.35 Aligned_cols=88 Identities=20% Similarity=0.161 Sum_probs=60.9
Q ss_pred hhHHHHHHhcCCCcceeeEeEeCCccccceEEEE--eCCc-cEEEEecCCCCc---------------------------
Q 020393 36 DPIREWILSEGKATHITKICPVGGGCINLASRYG--TDAG-SFFVKTNRSIGP--------------------------- 85 (326)
Q Consensus 36 ~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~--~~~~-~~vlK~~~~~~~--------------------------- 85 (326)
.++..++++ |...++. ++++.|....+|+.. ..+| .+++|+.+....
T Consensus 18 ~~~~~~~~~-~~~~~i~--~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (237)
T smart00090 18 LALYSLLNR-GILSAIG--GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVR 94 (237)
T ss_pred HHHHHHHhc-CchHHhC--CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHH
Confidence 445555543 3333444 468889999999997 3344 788998753210
Q ss_pred chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 86 SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 86 ~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
..++.|.+.+..+... ++.+|+++... ..++|||+++|..+
T Consensus 95 ~~~~~E~~~L~~L~~~-~i~~p~~~~~~-----~~~lV~E~~~g~~L 135 (237)
T smart00090 95 LWAEKEFRNLQRLYEA-GVPVPKPIAWR-----RNVLVMEFIGGDGL 135 (237)
T ss_pred HHHHHHHHHHHHHHhc-CCCCCeeeEec-----CceEEEEEecCCcc
Confidence 1245799999999764 68899998653 45899999999765
No 68
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.58 E-value=3.1e-07 Score=79.07 Aligned_cols=44 Identities=27% Similarity=0.264 Sum_probs=35.2
Q ss_pred chHHHHHHHHHHHHhcCCCCCcceeeecccCC---CceEEEEeeecCC
Q 020393 86 SMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFIEFG 130 (326)
Q Consensus 86 ~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~---~~~~~v~e~l~G~ 130 (326)
.....|...+..|.+. ++|||+|+..+.... ...++|+|+++|.
T Consensus 56 ~ra~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~~~ 102 (206)
T PF06293_consen 56 SRAKREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALPGA 102 (206)
T ss_pred hHHHHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCCCc
Confidence 4467899999999986 799999999876532 2568999999984
No 69
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=98.57 E-value=6.4e-07 Score=81.46 Aligned_cols=184 Identities=20% Similarity=0.084 Sum_probs=112.4
Q ss_pred eeeEeEeCCccccceEEEEeCCc---------cEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393 51 ITKICPVGGGCINLASRYGTDAG---------SFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 120 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~~---------~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 120 (326)
..+++.+++|..|.+|.++.+.. ++.+|++.... ......|..++..|+++ ---|++++.-..
T Consensus 42 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~~~~~~~Esv~fa~lSer--~lGPkL~G~F~~----- 114 (366)
T KOG2686|consen 42 EQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVDFSQRETESVMFAILSER--GLGPKLYGFFSG----- 114 (366)
T ss_pred hheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCccHHHhhhHHHHHHHHhhc--CCCcceeeecCC-----
Confidence 45788889999999999886432 58999997632 23456788888999887 357888876431
Q ss_pred EEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHH
Q 020393 121 YIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA 193 (326)
Q Consensus 121 ~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~ 193 (326)
.-+-+|++-+.+. .....+|..++++|....+.+. ... ..|. ++..++..+
T Consensus 115 GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~k--------------e~~--~~~~------~~~~wl~~~ 172 (366)
T KOG2686|consen 115 GRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGPK--------------EPR--SLWE------RYKKWLKGA 172 (366)
T ss_pred ccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCCc--------------cHH--HHHH------HHHHHHhhh
Confidence 2234566655442 4568999999999998874110 000 1121 122222222
Q ss_pred Hhh---------cCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCC-CeEEEcc-ccccCchhhhhhh
Q 020393 194 LDQ---------YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILDP-ACYYGHNEAEFGM 262 (326)
Q Consensus 194 ~~~---------~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-~~~iID~-~~~~G~~~~Dla~ 262 (326)
... ..+.-........+...+++.+....+.++||.|+..||||...+. ...+||+ .+.+.+..+|||.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDlan 252 (366)
T KOG2686|consen 173 KKIKPTEVSYSCGPDKLEIEDLLLELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDLAN 252 (366)
T ss_pred hhcCCCccchhcccchhhHHHHHHHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhHHH
Confidence 110 0000000111111111222221113568999999999999998554 4789996 7999999999996
Q ss_pred h
Q 020393 263 S 263 (326)
Q Consensus 263 ~ 263 (326)
-
T Consensus 253 H 253 (366)
T KOG2686|consen 253 H 253 (366)
T ss_pred H
Confidence 4
No 70
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.57 E-value=7.3e-07 Score=76.24 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=52.4
Q ss_pred EeEeCCccccceEEEEeCCccEEEEecCCCC-------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.+.+..|..+.+|.+..++.+++.|-..... ...++.|+++|+.|... ..+|+++..+ ..+++|+|
T Consensus 7 ~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~--~~vP~ll~~~-----~~~lvmey 79 (218)
T PRK12274 7 NEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL--PRTPRLLHWD-----GRHLDRSY 79 (218)
T ss_pred ceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC--CCCCEEEEEc-----CEEEEEee
Confidence 4556778889999888777788855443321 12567899999998653 4589998763 56999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|..+
T Consensus 80 I~G~~L 85 (218)
T PRK12274 80 LAGAAM 85 (218)
T ss_pred ecCccH
Confidence 998754
No 71
>PRK14705 glycogen branching enzyme; Provisional
Probab=98.47 E-value=7.1e-06 Score=86.27 Aligned_cols=249 Identities=16% Similarity=0.074 Sum_probs=136.0
Q ss_pred eEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--------CCC-------c
Q 020393 55 CPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--------PTG-------G 119 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--------~~~-------~ 119 (326)
+.+++-++|+...+...+.++|+|+++.-... ..=|.++.++|.+.+.-.||.+++.-.. .++ .
T Consensus 150 r~l~~EQSNTSvi~gd~~~~~ilKlfRrl~~G-~NPdvE~~r~Lteag~~~vP~llG~ve~~~~~~~~~~~~~~~~~~~t 228 (1224)
T PRK14705 150 KVLSGEQSNTSVIVDDGDSAAIVKFFRVLSAG-KNPEVELGAALTAAGTSEVPATLGWVTGEWDGPASNAGATARAVTGE 228 (1224)
T ss_pred cccccccCceEEEECCCCccEEEEEeeecCCC-CCccHHHHHHHhhCCCccCCCccEEEEEeecccccccCCccccCcee
Confidence 34555577777776432348999999853211 1235777888988655579999987322 111 2
Q ss_pred eEEEEeeecCCCC---------------CCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCC-CccHHHHHHH
Q 020393 120 SYIIMEFIEFGSS---------------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW-TSNWIEFYAE 183 (326)
Q Consensus 120 ~~~v~e~l~G~~~---------------~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~-~~~w~~~~~~ 183 (326)
-.++.+|+++... ...++.+|+.+|.||...+.. ++- +...... .. .+.|.
T Consensus 229 La~lq~fv~n~gDgW~~tl~~l~r~~~f~~~a~~LG~rtAemH~aLA~~--~~~--~~f~~~~----~~~~~~~~----- 295 (1224)
T PRK14705 229 LAVAHEFLAGGLDAWRLAVDAAASGKDFTAEARALGAATATVHRRLAET--LGT--HDGQEQG----PDIAAGVA----- 295 (1224)
T ss_pred HHHHHHhhcCCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcC--CCC--cccccCH----HHHHHHHH-----
Confidence 3667788887542 023688999999999988743 110 1000000 00 01111
Q ss_pred hhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCC-----CeEEEccc--c-----
Q 020393 184 HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EPVILDPA--C----- 251 (326)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-----~~~iID~~--~----- 251 (326)
+++...+ .. ..+.+...-+.+.+.+..+.........=||||||.|.||+.++. .-.||||+ .
T Consensus 296 ~rL~~~~----~~-~~~~~~~~~~~l~~~~~~l~~~~~~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEGEP~RpL~ 370 (1224)
T PRK14705 296 RRVRGSW----AE-AGPAVGPYDHALDELLSALDGRNAGQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEGEPLRPID 370 (1224)
T ss_pred HHHHHHH----hh-CCHHHHHHHHHHHHHHHHHhccCccceEEEecccccccEEEecCCCCccCCEEEEecCCCCCCChh
Confidence 1222111 11 122222222333333333222112355779999999999997442 26799963 2
Q ss_pred ---ccCchhhhhh-hhh---hc------C---------C----ChHhHHHhhhhCC-CCcCHHHHHHHHHHHHHHHHH--
Q 020393 252 ---YYGHNEAEFG-MSW---CA------G---------F----GGSFYNSYFEVMP-KQPGFEKRRDLYMLYHYLNHY-- 302 (326)
Q Consensus 252 ---~~G~~~~Dla-~~~---~~------~---------~----~~~fl~~Y~~~~~-l~~~~~~r~~~y~l~~~l~~~-- 302 (326)
....|..|+| |+. +. . | ..+|+++|.+..+ ..+.....+.+|.|=.++-..
T Consensus 371 ERR~k~sPLRDVAGMLRSFdYAa~~~l~~~~~~~~a~~W~~~~~~aFL~gY~~~~~g~~~~~~~LL~aflLeKAvYEv~Y 450 (1224)
T PRK14705 371 ERNSPDVPLRDVTGMLRSFDYAAGAATRENEGAHVPESWVDDCAAAFLAGYSEVTPGTIDRRSPLFVALWLDKALYEVVY 450 (1224)
T ss_pred hhccCCChHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHH
Confidence 2567899998 442 11 0 1 1469999998753 333322334445443333222
Q ss_pred -HHhccCcHHHHHHHHHHHHH
Q 020393 303 -NLFGSGYRSSALSIIDDYLR 322 (326)
Q Consensus 303 -~~~~~~~~~~~~~~~~~~~~ 322 (326)
....+.|...-.+.+.+++.
T Consensus 451 E~~nRP~Wv~IPL~gi~rll~ 471 (1224)
T PRK14705 451 ELRNRPDWLSIPVNASRRLLD 471 (1224)
T ss_pred HHHcCCcchHhHHHHHHHHHh
Confidence 23357888877777777664
No 72
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.43 E-value=3.3e-06 Score=71.10 Aligned_cols=71 Identities=24% Similarity=0.280 Sum_probs=50.3
Q ss_pred eEeCCccccceEEEEeC-CccEEEEecCCCC-----cc-h---------------------HHHHHHHHHHHHhcCCCCC
Q 020393 55 CPVGGGCINLASRYGTD-AGSFFVKTNRSIG-----PS-M---------------------FEGEALGLGAMYETRTIRA 106 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~-~~~~vlK~~~~~~-----~~-~---------------------~~~E~~~l~~L~~~~~~~v 106 (326)
..++.|..+.+|+.... +..+++|+..... .. . ...|...+..+... ++.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~ 81 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA-GVPV 81 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc-CCCC
Confidence 35778889999998876 4489999865321 01 0 13566667777665 5889
Q ss_pred cceeeecccCCCceEEEEeeecCCC
Q 020393 107 PRPFKVGALPTGGSYIIMEFIEFGS 131 (326)
Q Consensus 107 P~~~~~~~~~~~~~~~v~e~l~G~~ 131 (326)
|+++... ..+++|||++|..
T Consensus 82 ~~~~~~~-----~~~lv~e~~~g~~ 101 (187)
T cd05119 82 PKPIDLN-----RHVLVMEFIGGDG 101 (187)
T ss_pred CceEecC-----CCEEEEEEeCCCC
Confidence 9998764 4599999999965
No 73
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.39 E-value=1.5e-06 Score=75.43 Aligned_cols=136 Identities=24% Similarity=0.274 Sum_probs=86.2
Q ss_pred EeCCccccceEEEEeCCc-cEEEEecCCCC----------------------c-----chHHHHHHHHHHHHhcCCCCCc
Q 020393 56 PVGGGCINLASRYGTDAG-SFFVKTNRSIG----------------------P-----SMFEGEALGLGAMYETRTIRAP 107 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~----------------------~-----~~~~~E~~~l~~L~~~~~~~vP 107 (326)
+++.|=...||+-.+.++ .+.+|++.... + .=.++|...|..+.+. +++||
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA-GVrvP 133 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA-GVRVP 133 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCC
Confidence 566777788999776554 67889885320 0 0135788899999886 69999
Q ss_pred ceeeecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhH
Q 020393 108 RPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLG 187 (326)
Q Consensus 108 ~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~ 187 (326)
+|+..- ...++||++.... .+++ . .. ..+ . .. +
T Consensus 134 ~Pi~~~-----~nVLvMEfIg~~g-----------------~pAP--~-------Lk-Dv~----~-e~----------~ 166 (268)
T COG1718 134 EPIAFR-----NNVLVMEFIGDDG-----------------LPAP--R-------LK-DVP----L-EL----------E 166 (268)
T ss_pred Cceeec-----CCeEEEEeccCCC-----------------CCCC--C-------cc-cCC----c-Cc----------h
Confidence 999876 4599999997541 1111 0 00 000 0 00 0
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-c-cccCchh
Q 020393 188 YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-A-CYYGHNE 257 (326)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~-~~~G~~~ 257 (326)
+ .....+.+++.+..++. ...||||||..-|||+. ++.++|||+ . .-..||.
T Consensus 167 ----e---------~~~~~~~~v~~~~~l~~----~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~ 220 (268)
T COG1718 167 ----E---------AEGLYEDVVEYMRRLYK----EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPN 220 (268)
T ss_pred ----h---------HHHHHHHHHHHHHHHHH----hcCcccccchhhheEEE-CCeEEEEECccccccCCCc
Confidence 0 01223334444444442 35899999999999998 556999994 4 4577774
No 74
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.27 E-value=4.7e-06 Score=78.90 Aligned_cols=132 Identities=20% Similarity=0.243 Sum_probs=89.0
Q ss_pred EeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.+|+|..+.|++-+.. +..|-+|+-... -...+..|..+|..|.++- -+-+++..-.+ +..-|+|+||.
T Consensus 80 ~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hP--givkLy~TFQD-~~sLYFvLe~A 156 (604)
T KOG0592|consen 80 ILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHP--GIVKLYFTFQD-EESLYFVLEYA 156 (604)
T ss_pred eeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCC--CeEEEEEEeec-ccceEEEEEec
Confidence 3689999999998753 336777776431 1244567899999998541 24556655443 56889999999
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHH
Q 020393 128 EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH 207 (326)
Q Consensus 128 ~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 207 (326)
+++.+ |.-|++... |. +.|..||..+
T Consensus 157 ~nGdl----------l~~i~K~Gs----fd-----------------e~caR~YAAe----------------------- 182 (604)
T KOG0592|consen 157 PNGDL----------LDLIKKYGS----FD-----------------ETCARFYAAE----------------------- 182 (604)
T ss_pred CCCcH----------HHHHHHhCc----ch-----------------HHHHHHHHHH-----------------------
Confidence 98755 777777654 21 3445555431
Q ss_pred HHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 208 RLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 208 ~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
+++.++ ++ ...++||.|++|.|||+|+|+..-|=||.
T Consensus 183 -IldAle-yl----H~~GIIHRDlKPENILLd~dmhikITDFG 219 (604)
T KOG0592|consen 183 -ILDALE-YL----HSNGIIHRDLKPENILLDKDGHIKITDFG 219 (604)
T ss_pred -HHHHHH-HH----HhcCceeccCChhheeEcCCCcEEEeecc
Confidence 111122 11 24599999999999999999988888874
No 75
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.27 E-value=2.7e-06 Score=74.71 Aligned_cols=99 Identities=20% Similarity=0.213 Sum_probs=68.2
Q ss_pred HHHHHHHHhcccccCC--CCCcceeecCCCCCCeeecCCCCeEEEc---cc-c-ccCchhhhhhhh-h---hcCC---Ch
Q 020393 205 RGHRLMKNLAPLFEGV--NVEPCLLHGDLWSGNISSDKNGEPVILD---PA-C-YYGHNEAEFGMS-W---CAGF---GG 270 (326)
Q Consensus 205 ~~~~l~~~~~~~l~~~--~~~~~LiHgDl~~~NiL~~~~~~~~iID---~~-~-~~G~~~~Dla~~-~---~~~~---~~ 270 (326)
..+++.+....+|+.. ....+=||||||.+||.+- ++++.++| |+ . .+.|..+|+|++ + +.+. ..
T Consensus 188 ~t~~f~e~~~~lf~~R~~~g~IRecHGDLhl~ni~l~-dg~~~LFDCIEFNd~fr~iDv~~D~AFl~MDLe~~gr~dla~ 266 (337)
T COG2187 188 MTEEFLERHGPLFDRRIAEGFIRECHGDLHLRNICLW-DGEPALFDCIEFNDPFRFIDVLYDLAFLAMDLEFRGRKDLAR 266 (337)
T ss_pred HHHHHHHhhhHHHHHHHhcCCceecccchhhcceeee-cCcceEEEEeecCCcchHHHHHHHHHHHHhhHhhcCChHHHH
Confidence 3344444444444321 3567889999999999995 45689999 43 3 599999999976 3 2233 35
Q ss_pred HhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHh
Q 020393 271 SFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF 305 (326)
Q Consensus 271 ~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~ 305 (326)
.|+++|.+...= ......+++|.-+..++++.+.
T Consensus 267 ~~ln~Yl~~tgD-~~gl~lLpfyla~rA~VRakV~ 300 (337)
T COG2187 267 RFLNTYLEETGD-WDGLELLPFYLAYRAYVRAKVT 300 (337)
T ss_pred HHHHHHHHHhCC-ccHHHHhHHHHHHHHHHHHhee
Confidence 799999877531 1225688999998888887554
No 76
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.22 E-value=5e-06 Score=69.86 Aligned_cols=72 Identities=17% Similarity=0.112 Sum_probs=53.4
Q ss_pred eCCccccceEEEEeC--CccEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 57 VGGGCINLASRYGTD--AGSFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
++.|..+.+|++... +..+++|....... ..+..|.+.++.+.. ..+++++..... .+..++++|+++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~~~e~~~~~ 76 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH---PNIVKLYGVFED-ENHLYLVMEYCEGG 76 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC---CCeeeEeeeeec-CCeEEEEEecCCCC
Confidence 457888999999886 45899999976433 457788888887754 456777766543 46889999999985
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
++
T Consensus 77 ~l 78 (215)
T cd00180 77 SL 78 (215)
T ss_pred cH
Confidence 43
No 77
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.20 E-value=1.1e-05 Score=78.12 Aligned_cols=99 Identities=13% Similarity=0.061 Sum_probs=65.6
Q ss_pred CCchhHHHHHHhcCCCcce------eeEeEeCCccccceEEEEeCCc-cEEEEecCCCCc--------------------
Q 020393 33 LSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGP-------------------- 85 (326)
Q Consensus 33 ~~~~~i~~~l~~~~~~~~v------~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~-------------------- 85 (326)
.+++++.+++.+. +|..+ .+-+|++--...+|++-++.+| .++||+.++.=+
T Consensus 140 ~~~ee~~~i~e~E-lG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~ 218 (538)
T KOG1235|consen 140 FPWEEAFKIFEEE-LGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKF 218 (538)
T ss_pred CCHHHHHHHHHHH-hCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHh
Confidence 4789999999987 33322 2335565556778999999887 699999876300
Q ss_pred --------------------chHHHHHHHHHH----HHhcC---CCCCcceeeecccCCCceEEEEeeecCCCCCCc
Q 020393 86 --------------------SMFEGEALGLGA----MYETR---TIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGN 135 (326)
Q Consensus 86 --------------------~~~~~E~~~l~~----L~~~~---~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~~ 135 (326)
=.+-.|++..+. +++.. .+.||+|++.-. +...++|||++|.++.+.
T Consensus 219 ~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s---t~RVLtME~~~G~~i~Dl 292 (538)
T KOG1235|consen 219 FPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLS---TKRVLTMEYVDGIKINDL 292 (538)
T ss_pred CcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcC---cceEEEEEecCCccCCCH
Confidence 001134433332 22322 577999998764 589999999999877543
No 78
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.19 E-value=1.9e-06 Score=77.42 Aligned_cols=132 Identities=20% Similarity=0.273 Sum_probs=88.5
Q ss_pred eCCccccceEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCCCCCccee
Q 020393 57 VGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRTIRAPRPF 110 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~~~vP~~~ 110 (326)
++-|-.+.+|.+...+| .+++|+.+-. ++-...+|.+.++.|.++ ++|||+|+
T Consensus 100 IGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~-gfpVPkpi 178 (465)
T KOG2268|consen 100 IGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER-GFPVPKPI 178 (465)
T ss_pred cccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc-CCCCCCcc
Confidence 45566788999988766 7888876420 011134799999999998 79999999
Q ss_pred eecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHH
Q 020393 111 KVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQL 190 (326)
Q Consensus 111 ~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~ 190 (326)
-.+ .+++||+.++|-++ .++|.+..+ ...+
T Consensus 179 D~~-----RH~Vvmelv~g~Pl-----------~~v~~v~d~-------------------------~~ly--------- 208 (465)
T KOG2268|consen 179 DHN-----RHCVVMELVDGYPL-----------RQVRHVEDP-------------------------PTLY--------- 208 (465)
T ss_pred ccc-----ceeeHHHhhcccce-----------eeeeecCCh-------------------------HHHH---------
Confidence 654 88999999999765 233333321 0000
Q ss_pred HHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc--ccccCchhhhh
Q 020393 191 KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP--ACYYGHNEAEF 260 (326)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~--~~~~G~~~~Dl 260 (326)
..+-.++-. + ...++|||||.-=||++++++...+||| +....||-.+.
T Consensus 209 -------------~~lm~~Iv~---l-----a~~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~sh~nA~~ 259 (465)
T KOG2268|consen 209 -------------DDLMGLIVR---L-----ANHGLIHGDFNEFNIMVKDDDKIVVIDFPQMVSTSHPNAEY 259 (465)
T ss_pred -------------HHHHHHHHH---H-----HHcCceecccchheeEEecCCCEEEeechHhhccCCCccce
Confidence 111111111 1 2358999999999999998887899994 45677775543
No 79
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.17 E-value=1.8e-05 Score=74.90 Aligned_cols=135 Identities=16% Similarity=0.219 Sum_probs=86.9
Q ss_pred eeEeEeCCccccceEEEEeC-Ccc-EEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 52 TKICPVGGGCINLASRYGTD-AGS-FFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~-~~~-~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
.-++.|+.|....||.+.-. .|+ |-+|+-... +..-+..|..+|... .+--|.+++..-.+ ...-|+|
T Consensus 144 e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~---ds~~vVKLyYsFQD-~~~LYLi 219 (550)
T KOG0605|consen 144 ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV---DSPWVVKLYYSFQD-KEYLYLI 219 (550)
T ss_pred hhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc---CCCcEEEEEEEecC-CCeeEEE
Confidence 45677899999999999864 454 566776542 223355677666542 23456677766543 5688999
Q ss_pred EeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393 124 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 203 (326)
Q Consensus 124 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 203 (326)
||||+|++. ..-|-.... ..++|..||..+.+.
T Consensus 220 MEylPGGD~----------mTLL~~~~~---------------------L~e~~arfYiaE~vl---------------- 252 (550)
T KOG0605|consen 220 MEYLPGGDM----------MTLLMRKDT---------------------LTEDWARFYIAETVL---------------- 252 (550)
T ss_pred EEecCCccH----------HHHHHhcCc---------------------CchHHHHHHHHHHHH----------------
Confidence 999999753 222222111 125677777542110
Q ss_pred HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
.++.+ ...+.||.|++|+|+|+|..|..-+=||.
T Consensus 253 -----AI~~i--------H~~gyIHRDIKPdNlLiD~~GHiKLSDFG 286 (550)
T KOG0605|consen 253 -----AIESI--------HQLGYIHRDIKPDNLLIDAKGHIKLSDFG 286 (550)
T ss_pred -----HHHHH--------HHcCcccccCChhheeecCCCCEeecccc
Confidence 11111 24589999999999999999988888874
No 80
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.12 E-value=2.1e-05 Score=73.33 Aligned_cols=72 Identities=13% Similarity=0.027 Sum_probs=49.2
Q ss_pred EeEeCCccccceEEEEeC--Ccc-EEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 54 ICPVGGGCINLASRYGTD--AGS-FFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~-~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
.+.++.|.+..||+.... ++. +.+|..... ....+..|.++|+.|... -.+|.++.. +..|+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~--~iv~~l~~~-----~~~~L 95 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGI--GVVPQLLAT-----GKDGL 95 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCC--CCCcEEEEc-----CCcEE
Confidence 455788999999998653 344 466764321 123478899999999753 235666543 46799
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+|||++|..+
T Consensus 96 VmE~~~G~~L 105 (365)
T PRK09188 96 VRGWTEGVPL 105 (365)
T ss_pred EEEccCCCCH
Confidence 9999999655
No 81
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=98.05 E-value=9.2e-05 Score=62.40 Aligned_cols=165 Identities=21% Similarity=0.204 Sum_probs=90.4
Q ss_pred cccceEEEEeCCccEEEE----ecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCC---
Q 020393 61 CINLASRYGTDAGSFFVK----TNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR--- 133 (326)
Q Consensus 61 ~~n~~y~v~~~~~~~vlK----~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~--- 133 (326)
.++..|.|+..+|.-++| +.... +.. .=..++.+-.. .-+.+++..+ ...++||+..|..+.
T Consensus 24 ~ssrllpv~~~ggsa~~~amlk~~~~~--eer-rG~~ll~ww~G---~Gaarvla~d-----~~alLlEra~~~rsl~~l 92 (274)
T COG3570 24 HSSRLLPVRRRGGSAIAKAMLKKADLE--EER-RGADLLAWWDG---IGAARVLAQD-----DNALLLERAGGERSLDVL 92 (274)
T ss_pred cccceEEEEecCchhHHHHHhhhccch--Hhh-ccchhhhhhhc---CCcchhhccC-----ccHHHHHhccccchHHHH
Confidence 345667777666543333 33221 111 11334566554 4467777665 458899999887541
Q ss_pred ------C-cHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHH
Q 020393 134 ------G-NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 206 (326)
Q Consensus 134 ------~-~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 206 (326)
. .-+-+.+.++++|+-..+++ +.. .+...|-+.+. ..+.+ +..+.-..
T Consensus 93 ~~~G~Dd~aTrIac~a~~rlh~Prp~pp------p~L--------~pL~~wf~sLf--------~~a~~---d~~i~v~a 147 (274)
T COG3570 93 VRDGNDDAATRIACEALARLHAPRPSPP------PEL--------LPLERWFESLF--------RKARQ---DGSIYVEA 147 (274)
T ss_pred HHhCCchHHHHHHHHHHHHhhCCCCCCC------ccc--------ccHHHHHHHHH--------HHHhh---cCCcchhH
Confidence 1 23556788999998754311 100 11122221111 11111 11111111
Q ss_pred HHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhhhh
Q 020393 207 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC 265 (326)
Q Consensus 207 ~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~~~ 265 (326)
.++. +.++.. +...+.+|||+|.+|||=.+...=.+||+...+|++.||.+-+.|
T Consensus 148 A~~A---~~LL~~-p~di~pLHGDlHH~Nild~~~rGWlvIDPkgl~Gdrg~D~ANlf~ 202 (274)
T COG3570 148 ARAA---QTLLDT-PRDIRPLHGDLHHGNILDGDRRGWLVIDPKGLIGDRGFDYANLFC 202 (274)
T ss_pred HHHH---HHHhcC-ccccccCcccccccccccCCcCceEEEccccccCccccchHhhhc
Confidence 1111 223333 467899999999999996444223479999899999999997765
No 82
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=98.01 E-value=4.1e-05 Score=70.52 Aligned_cols=138 Identities=17% Similarity=0.117 Sum_probs=89.0
Q ss_pred eeeEeEeCCccccceEEEEeCCc--cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 51 ITKICPVGGGCINLASRYGTDAG--SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
..-++.+|.|....||.++..+. -|-+|+-.... ....+.|.++|+.+.. --.|++|..-++ +...++
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH---PFlPTLYa~fet-~~~~cl 154 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH---PFLPTLYASFET-DKYSCL 154 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC---Cccchhhheeec-cceeEE
Confidence 34466789999999999987653 56778765321 2334678888887753 238999987655 678999
Q ss_pred EEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHH
Q 020393 123 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI 202 (326)
Q Consensus 123 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~ 202 (326)
+|||++|+++ -...|+++.. .| .++-..||..+
T Consensus 155 ~meyCpGGdL----------~~LrqkQp~~--~f-----------------se~~aRFYaAE------------------ 187 (459)
T KOG0610|consen 155 VMEYCPGGDL----------HSLRQKQPGK--RF-----------------SESAARFYAAE------------------ 187 (459)
T ss_pred EEecCCCccH----------HHHHhhCCCC--cc-----------------chhhHHHHHHH------------------
Confidence 9999999754 2223333321 01 11222334321
Q ss_pred HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 203 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 203 ~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
++-.++ +| ...++|=.||+|.|||+.+||...+.||+
T Consensus 188 ------vl~ALE-YL----HmlGivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 188 ------VLLALE-YL----HMLGIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred ------HHHHHH-HH----HhhceeeccCCcceeEEecCCcEEeeecc
Confidence 111111 22 23588999999999999999999999964
No 83
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=97.97 E-value=5.9e-05 Score=70.74 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=51.5
Q ss_pred eEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
-++.++.|..+.||++.... ..+.+|+.... ....+..|.++++.+.. -.+.+++..... ++..+++|
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~ 80 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFVM 80 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCEEEEEE
Confidence 46778999999999987643 36888987531 12335668877777643 234555544332 56889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|..+
T Consensus 81 E~~~~g~L 88 (376)
T cd05598 81 DYIPGGDM 88 (376)
T ss_pred eCCCCCcH
Confidence 99998755
No 84
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.93 E-value=0.00014 Score=68.05 Aligned_cols=141 Identities=20% Similarity=0.206 Sum_probs=89.6
Q ss_pred EeCCccccceEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC-ceEEEEeeecCC
Q 020393 56 PVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIMEFIEFG 130 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~-~~~~v~e~l~G~ 130 (326)
.++.|....+|+-...++ .+.||...... ...+..|.+++..+.. -.+-+++++... .+ ...+||||++.+
T Consensus 82 ~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H---~Nlv~LlGyC~e-~~~~~~LVYEym~nG 157 (361)
T KOG1187|consen 82 LIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRH---PNLVKLLGYCLE-GGEHRLLVYEYMPNG 157 (361)
T ss_pred ceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCC---cCcccEEEEEec-CCceEEEEEEccCCC
Confidence 466777899999998885 67888654422 3448889988888873 245667777653 34 489999999976
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHH
Q 020393 131 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 210 (326)
Q Consensus 131 ~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 210 (326)
++ -..||..... ..+|.. |+.-.+.. .+.+
T Consensus 158 sL----------~d~L~~~~~~---------------------~L~W~~-----R~kIa~g~--------------A~gL 187 (361)
T KOG1187|consen 158 SL----------EDHLHGKKGE---------------------PLDWET-----RLKIALGA--------------ARGL 187 (361)
T ss_pred CH----------HHHhCCCCCC---------------------CCCHHH-----HHHHHHHH--------------HHHH
Confidence 55 2234442210 025653 22221111 1112
Q ss_pred HHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cccCc
Q 020393 211 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGH 255 (326)
Q Consensus 211 ~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G~ 255 (326)
+ ++.. ..++.+||+|+++.|||+|++-.+-|-||. +..++
T Consensus 188 ~----yLH~-~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~ 228 (361)
T KOG1187|consen 188 A----YLHE-GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGP 228 (361)
T ss_pred H----HHcc-CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCC
Confidence 2 2221 356799999999999999988778888973 44444
No 85
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.93 E-value=6.2e-05 Score=70.33 Aligned_cols=76 Identities=17% Similarity=0.115 Sum_probs=49.5
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
-++.++.|..+.||++... +..|.+|+.... ....+..|..++..+.. ..+++++..... .+..|+||
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~---~~iv~~~~~~~~-~~~~~lv~ 80 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS---LWVVKMFYSFQD-KLNLYLIM 80 (363)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCeEEEEE
Confidence 4567888999999998764 237888987531 12335567766665532 235555544332 46789999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|+.+
T Consensus 81 E~~~gg~L 88 (363)
T cd05628 81 EFLPGGDM 88 (363)
T ss_pred cCCCCCcH
Confidence 99998654
No 86
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.92 E-value=5.2e-05 Score=70.52 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=50.9
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
..++.++.|..+.||++... +..|++|...... ...+..|.++++.+.. -.+.+++..... .+..+++||
T Consensus 77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e 152 (353)
T PLN00034 77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNH---PNVVKCHDMFDH-NGEIQVLLE 152 (353)
T ss_pred hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCC---CCcceeeeEecc-CCeEEEEEe
Confidence 34566888999999998764 3478999875321 2345678887777653 123444443322 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|..+
T Consensus 153 ~~~~~~L 159 (353)
T PLN00034 153 FMDGGSL 159 (353)
T ss_pred cCCCCcc
Confidence 9998754
No 87
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.92 E-value=7.9e-05 Score=68.55 Aligned_cols=76 Identities=9% Similarity=-0.023 Sum_probs=48.4
Q ss_pred EeEeCCccccceEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 54 ICPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
++.++.|..+.||++... . ..+.+|+.... ....+..|..+++.+..+ -.++.++..... ++..+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~ 81 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQS--PFLVTLHYAFQT-EAKLH 81 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCC--CCcccEEEEEec-CCEEE
Confidence 566888999999998752 2 35778876421 112345677777777543 124444433322 46789
Q ss_pred EEEeeecCCCC
Q 020393 122 IIMEFIEFGSS 132 (326)
Q Consensus 122 ~v~e~l~G~~~ 132 (326)
++|||++|..+
T Consensus 82 lv~e~~~~g~L 92 (332)
T cd05614 82 LILDYVSGGEM 92 (332)
T ss_pred EEEeCCCCCcH
Confidence 99999998754
No 88
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=97.92 E-value=6.7e-05 Score=69.96 Aligned_cols=77 Identities=17% Similarity=0.104 Sum_probs=49.5
Q ss_pred eeEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 52 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
..++.++.|..+.||++.... ..+++|+.+.. ....+..|..++..+.. -.+++++..... .+..++|
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~lv 79 (360)
T cd05627 4 ESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG---AWVVKMFYSFQD-KRNLYLI 79 (360)
T ss_pred eEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEE
Confidence 346778889999999987643 36888876431 12334567666655532 234455544332 4678999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|+.+
T Consensus 80 ~E~~~gg~L 88 (360)
T cd05627 80 MEFLPGGDM 88 (360)
T ss_pred EeCCCCccH
Confidence 999998754
No 89
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.91 E-value=0.00013 Score=67.34 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=50.7
Q ss_pred EeEeCCccccceEEEEe------CC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 54 ICPVGGGCINLASRYGT------DA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~------~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
.+.++.|..+.||+... .. ..+.+|...... ...+..|..++..+..+ -.+.+++.......+..++
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~~~l 89 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNH--LNVVNLLGACTKPNGPLMV 89 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccC--cceeeEEeEecCCCCceEE
Confidence 46689999999999863 11 258888765321 23356788888877543 2355555543322356789
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+|||++|+++
T Consensus 90 v~ey~~~g~L 99 (338)
T cd05102 90 IVEFCKYGNL 99 (338)
T ss_pred EEecCCCCcH
Confidence 9999999876
No 90
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.89 E-value=3.4e-05 Score=72.34 Aligned_cols=77 Identities=13% Similarity=0.055 Sum_probs=49.8
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
.-++.++.|..+.+|++... +..|++|..... ....+..|..+++.+.. -.+++++..... ++..++|
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h---~~iv~~~~~~~~-~~~~~lv 121 (370)
T cd05596 46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS---EWIVQLHYAFQD-DKYLYMV 121 (370)
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCEEEEE
Confidence 44566888999999998764 337888986421 12334567777766643 224445443322 4678999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|+++
T Consensus 122 ~Ey~~gg~L 130 (370)
T cd05596 122 MEYMPGGDL 130 (370)
T ss_pred EcCCCCCcH
Confidence 999998755
No 91
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=97.88 E-value=0.00013 Score=72.74 Aligned_cols=183 Identities=13% Similarity=0.073 Sum_probs=105.0
Q ss_pred ceeeEeEeCCccccceEEEEeCCc--cEEEEec-CCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecc-cC-----CC
Q 020393 50 HITKICPVGGGCINLASRYGTDAG--SFFVKTN-RSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGA-LP-----TG 118 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~-~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~-~~-----~~ 118 (326)
+|+=.+-|.+|.+..||.+++..+ +|++|.- ..+ ..+.+..|+++++.|..+ |.++.+-+ .. .+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh-----~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGH-----KNIVSYIDSSAINRSSNN 112 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCC-----CceeeEeccccccccCCC
Confidence 344444578899999999988544 7888754 332 245578999999999865 44444332 10 12
Q ss_pred ---ceEEEEeeecCCCCCCcHHHHHHHHH-HHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHH
Q 020393 119 ---GSYIIMEFIEFGSSRGNQSVFGKKLA-EMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLAL 194 (326)
Q Consensus 119 ---~~~~v~e~l~G~~~~~~~~~lg~~La-~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~ 194 (326)
..+++|||+.|..+ .+.|- +++.... + +.+
T Consensus 113 ~~~EvllLmEyC~gg~L-------vd~mn~Rlq~~lt-----------------------e---~eV------------- 146 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSL-------VDFMNTRLQTRLT-----------------------E---DEV------------- 146 (738)
T ss_pred ceeEEEeehhhccCCcH-------HHHHHHHHhccCC-----------------------h---HHH-------------
Confidence 45788999997644 12221 2222110 0 001
Q ss_pred hhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cc---cCc-hhhhhhhhhh----
Q 020393 195 DQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY---YGH-NEAEFGMSWC---- 265 (326)
Q Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~---~G~-~~~Dla~~~~---- 265 (326)
.+.+....+.+..+. ..++.|||.||+..|||+..++.-.+.||. +. ... -..++.++..
T Consensus 147 --------LkIf~dv~~AVa~mH---~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k 215 (738)
T KOG1989|consen 147 --------LKIFYDVCEAVAAMH---YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEK 215 (738)
T ss_pred --------HHHHHHHHHHHHHHh---cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHh
Confidence 111222222222222 367899999999999999999888999984 22 222 3345554421
Q ss_pred ---cCC-ChHhHHHhhhhCCCC---cCHHHHHHHHHH
Q 020393 266 ---AGF-GGSFYNSYFEVMPKQ---PGFEKRRDLYML 295 (326)
Q Consensus 266 ---~~~-~~~fl~~Y~~~~~l~---~~~~~r~~~y~l 295 (326)
..+ .+++++-|.- .|++ +.|.-=+-+|.|
T Consensus 216 ~TTp~YRsPEMIDlysg-~pI~eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 216 YTTPQYRSPEMIDLYSG-LPIGEKSDIWALGCLLYKL 251 (738)
T ss_pred hCCccccChHHHhhhcC-CCCcchhHHHHHHHHHHHH
Confidence 111 3678888853 3443 345444444443
No 92
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=97.85 E-value=0.00011 Score=67.49 Aligned_cols=76 Identities=12% Similarity=0.029 Sum_probs=47.7
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|....||++...+ ..+++|+.... ....+..|..++..+... -.++.++..... .+..|++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E 81 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP--PFLTQLHSCFQT-MDRLYFVME 81 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCC--CceeeeEEEEEc-CCEEEEEEc
Confidence 5668889999999997643 36889987531 112234566655555421 224444443322 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 82 ~~~~g~L 88 (324)
T cd05587 82 YVNGGDL 88 (324)
T ss_pred CCCCCcH
Confidence 9998754
No 93
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.83 E-value=0.00021 Score=62.69 Aligned_cols=73 Identities=22% Similarity=0.137 Sum_probs=48.6
Q ss_pred EeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 56 PVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
.++.|..+.+|+.+.. +..+++|...... ...+..|.++++.+.. -.+++++..... .+..+++|||++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~ 77 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH---PNIVRLIGVCTQ-KQPIYIVMELVQG 77 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEcC-CCCeEEEEeeccC
Confidence 4677888999998763 3368889765321 2346678777777642 234555554433 4678999999998
Q ss_pred CCC
Q 020393 130 GSS 132 (326)
Q Consensus 130 ~~~ 132 (326)
.++
T Consensus 78 ~~L 80 (252)
T cd05084 78 GDF 80 (252)
T ss_pred CcH
Confidence 754
No 94
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.82 E-value=0.00013 Score=68.54 Aligned_cols=76 Identities=17% Similarity=0.180 Sum_probs=51.1
Q ss_pred EeEeCCccccceEEEEe------CCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 54 ICPVGGGCINLASRYGT------DAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~------~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
.+.++.|..+.||+.+. +.+ .+.+|+.... ....+..|.+++..+..+ -.+.+++..... .+..++
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~H--pnIv~l~~~~~~-~~~~~l 116 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--INIVNLLGACTV-GGPTLV 116 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCC--cceeeeeeeecc-CCccee
Confidence 46688899999999863 122 5788876532 123456788888888543 235555554433 467899
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+|||++|+++
T Consensus 117 v~E~~~~g~L 126 (375)
T cd05104 117 ITEYCCYGDL 126 (375)
T ss_pred eehhccCCcH
Confidence 9999999875
No 95
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.82 E-value=0.00031 Score=61.86 Aligned_cols=76 Identities=20% Similarity=0.187 Sum_probs=51.0
Q ss_pred EeEeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
.+.++.|..+.+|+....+..+++|...... ...+..|...++.+.. ..+.+++.......+..+++||+++|.++
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~lv~e~~~~~~L 87 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH---SNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87 (256)
T ss_pred eeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCC---CCeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence 3557778888999998777789999876532 2345678777776643 23444443322214578999999998655
No 96
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.81 E-value=8.7e-05 Score=68.67 Aligned_cols=75 Identities=15% Similarity=0.073 Sum_probs=48.9
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.||++... +..|++|+.... ....+..|..++..+.. -.+++++..... ++..++|||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS---PWIVKLYYSFQD-EEHLYLVME 81 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC---CCccchhhheec-CCeEEEEEc
Confidence 466888899999999865 347888987531 12345567776666642 224444433222 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 82 ~~~~~~L 88 (350)
T cd05573 82 YMPGGDL 88 (350)
T ss_pred CCCCCCH
Confidence 9998654
No 97
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.81 E-value=6.1e-05 Score=72.95 Aligned_cols=139 Identities=19% Similarity=0.202 Sum_probs=82.5
Q ss_pred ceeeEeEeCCccccceEEEEeCCc--cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 50 HITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
-.+.|+.++-|.+..|-++..-|- -|..|.-+.. +.+...+|..+| ++...-=|-++|+.-.+ .+.-|
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDIL---AEADn~WVVrLyySFQD-kdnLY 705 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDIL---AEADNEWVVRLYYSFQD-KDNLY 705 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhH---hhcCCcceEEEEEEecc-CCceE
Confidence 367889999998888887764332 3444444321 122344566554 33333457788876544 56889
Q ss_pred EEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChH
Q 020393 122 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST 201 (326)
Q Consensus 122 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~ 201 (326)
+||+||+|++. +.-|-+... |. ++-..||.. +
T Consensus 706 FVMdYIPGGDm----------MSLLIrmgI----Fe-----------------E~LARFYIA--------E--------- 737 (1034)
T KOG0608|consen 706 FVMDYIPGGDM----------MSLLIRMGI----FE-----------------EDLARFYIA--------E--------- 737 (1034)
T ss_pred EEEeccCCccH----------HHHHHHhcc----CH-----------------HHHHHHHHH--------H---------
Confidence 99999999753 322222222 21 111223321 0
Q ss_pred HHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccc
Q 020393 202 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY 252 (326)
Q Consensus 202 ~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~ 252 (326)
+.-.++.+ ..-++||.|++|+|||+|.||..-+-||..|
T Consensus 738 ----ltcAiesV--------HkmGFIHRDiKPDNILIDrdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 738 ----LTCAIESV--------HKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 776 (1034)
T ss_pred ----HHHHHHHH--------HhccceecccCccceEEccCCceeeeecccc
Confidence 11112211 3458999999999999999998889997543
No 98
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.80 E-value=0.0003 Score=62.31 Aligned_cols=75 Identities=20% Similarity=0.225 Sum_probs=50.9
Q ss_pred eEeEeCCccccceEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 53 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
-.+.++.|..+.+|++...+ ..+++|..... ....+..|.++++.+.. ..+.+++.... ++..+++||+++|
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~~~~~--~~~~~lv~e~~~~ 84 (262)
T cd05071 10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH---EKLVQLYAVVS--EEPIYIVTEYMSK 84 (262)
T ss_pred EeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCC---CCcceEEEEEC--CCCcEEEEEcCCC
Confidence 34567888889999987644 47888988642 23446678888877743 23444444322 4568999999998
Q ss_pred CCC
Q 020393 130 GSS 132 (326)
Q Consensus 130 ~~~ 132 (326)
.++
T Consensus 85 ~~L 87 (262)
T cd05071 85 GSL 87 (262)
T ss_pred CcH
Confidence 765
No 99
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.80 E-value=0.00015 Score=66.51 Aligned_cols=78 Identities=12% Similarity=0.023 Sum_probs=48.1
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|....+|++... +..+++|..... ....+..|..++..+....--.+.+++..... .+..|+|||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-~~~~~lv~E 82 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-EDHVCFVME 82 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-CCEEEEEEc
Confidence 456788889999998764 337888987531 11234456665555543211234445443322 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|..+
T Consensus 83 ~~~~~~L 89 (324)
T cd05589 83 YAAGGDL 89 (324)
T ss_pred CCCCCcH
Confidence 9998754
No 100
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=97.79 E-value=0.00013 Score=66.92 Aligned_cols=74 Identities=11% Similarity=0.012 Sum_probs=46.6
Q ss_pred EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++...+ ..+.+|+.... ....+..|.+++..+..+ -.+++++..... .+..|+||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--p~i~~~~~~~~~-~~~~~lv~E~~ 78 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH--PFLTALHCCFQT-KDRLFFVMEYV 78 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCeEEEEEeCC
Confidence 36788889999997643 36888987531 112244566666555433 234555543332 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 79 ~~~~L 83 (321)
T cd05591 79 NGGDL 83 (321)
T ss_pred CCCcH
Confidence 98754
No 101
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=97.79 E-value=0.00012 Score=67.32 Aligned_cols=76 Identities=13% Similarity=-0.035 Sum_probs=49.6
Q ss_pred eEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
-++.++.|..+.||+....+ ..+++|+.... ....+..|..++..+.. -.+++++..... .+..|++|
T Consensus 5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~lv~ 80 (333)
T cd05600 5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS---EWLVKLLYAFQD-DEYLYLAM 80 (333)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC---CCCccEEEEEEc-CCEEEEEE
Confidence 35678889999999998643 37888987531 12234456666665542 234555544332 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|.++
T Consensus 81 e~~~g~~L 88 (333)
T cd05600 81 EYVPGGDF 88 (333)
T ss_pred eCCCCCCH
Confidence 99998765
No 102
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.79 E-value=9.8e-05 Score=69.44 Aligned_cols=77 Identities=18% Similarity=0.106 Sum_probs=50.7
Q ss_pred eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
..++.++.|..+.||++... ++ .+.+|..... ....+..|..+++.+.. -.+++++..... .+..++|
T Consensus 4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h---~~iv~~~~~~~~-~~~~~lv 79 (382)
T cd05625 4 VKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN---EWVVRLYYSFQD-KDNLYFV 79 (382)
T ss_pred EEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC---CcCCeEEEEEEe-CCEEEEE
Confidence 45677899999999998763 33 6788876531 12235567777766642 235555544332 4688999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|+.+
T Consensus 80 ~E~~~gg~L 88 (382)
T cd05625 80 MDYIPGGDM 88 (382)
T ss_pred EeCCCCCcH
Confidence 999998754
No 103
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.78 E-value=0.00028 Score=66.42 Aligned_cols=77 Identities=17% Similarity=0.106 Sum_probs=51.4
Q ss_pred eeEeEeCCccccceEEEEeC-C-ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 52 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
..++.++.|..+.||++... + ..|.+|+.... . ...+..|..+++.+.. -.+++++..... .+..+++
T Consensus 4 ~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~l~~~~~~-~~~~~lv 79 (381)
T cd05626 4 VKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFV 79 (381)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC---CCeeeeEEEEec-CCEEEEE
Confidence 45678999999999998763 2 36888987531 1 1235567777766643 235555554432 4688999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
||+++|+.+
T Consensus 80 ~E~~~gg~L 88 (381)
T cd05626 80 MDYIPGGDM 88 (381)
T ss_pred EecCCCCcH
Confidence 999998754
No 104
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.77 E-value=0.00012 Score=66.99 Aligned_cols=74 Identities=15% Similarity=0.057 Sum_probs=47.0
Q ss_pred eEeCCccccceEEEEeC----C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 55 CPVGGGCINLASRYGTD----A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
+.++.|..+.||++... . ..+.+|+.... ....+..|.++++.+.. -.+++++..... ++..|+||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH---PFIVKLHYAFQT-EGKLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC---CCcccEEEEEEc-CCEEEEEE
Confidence 45778888999988642 2 36888876531 12234457777666642 234555544332 56889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|.++
T Consensus 78 e~~~~~~L 85 (318)
T cd05582 78 DFLRGGDL 85 (318)
T ss_pred cCCCCCcH
Confidence 99998654
No 105
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.77 E-value=0.00041 Score=60.72 Aligned_cols=73 Identities=21% Similarity=0.090 Sum_probs=48.0
Q ss_pred EeCCccccceEEEEeCCc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 56 PVGGGCINLASRYGTDAG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
.++.|..+.+|+....++ .+++|...... ...+..|.+.++.+.. -.+++++..... .+..+++||+++|.
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~~ 77 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH---PNIVKLIGVCTQ-RQPIYIVMELVPGG 77 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEec-CCccEEEEECCCCC
Confidence 467788899999876554 68889875432 1235567777766642 234555544332 46789999999987
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
++
T Consensus 78 ~L 79 (250)
T cd05085 78 DF 79 (250)
T ss_pred cH
Confidence 54
No 106
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.77 E-value=0.00013 Score=66.85 Aligned_cols=74 Identities=15% Similarity=0.078 Sum_probs=45.4
Q ss_pred EeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++.... + .+.+|+.... ....+..|..++..+..+ -.+++++..... .+..|+||||+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~iv~~~~~~~~-~~~~~iv~Ey~ 78 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH--PFLTQLYCCFQT-PDRLFFVMEFV 78 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCC--CchhceeeEEEc-CCEEEEEEcCC
Confidence 46788889999998643 3 6888876431 112233455555544332 234555544332 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 79 ~~g~L 83 (320)
T cd05590 79 NGGDL 83 (320)
T ss_pred CCchH
Confidence 98654
No 107
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.75 E-value=0.00012 Score=67.15 Aligned_cols=74 Identities=16% Similarity=0.094 Sum_probs=47.2
Q ss_pred eEeCCccccceEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 55 CPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
+.++.|....+|++... . ..+++|+.... ....+..|..+++.+... .+.+++..... ++..|+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp---~iv~~~~~~~~-~~~~~l 77 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHP---FIVDLIYAFQT-GGKLYL 77 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCC---chhceeeEEec-CCeEEE
Confidence 56788999999998752 2 25888876421 112345677777777531 24444433322 468899
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+|||++|..+
T Consensus 78 v~e~~~~~~L 87 (323)
T cd05584 78 ILEYLSGGEL 87 (323)
T ss_pred EEeCCCCchH
Confidence 9999998754
No 108
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.74 E-value=0.00012 Score=68.65 Aligned_cols=75 Identities=16% Similarity=0.063 Sum_probs=49.3
Q ss_pred EeEeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.||++... + ..+.+|..... ....+..|.++++.+.. -.+++++..... .+..|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~iv~~~~~~~~-~~~~~lv~E 81 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS---PWVVSLYYSFQD-AQYLYLIME 81 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCeeEEEEe
Confidence 567888999999998763 3 36888876421 12335567777666542 235555554332 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|..+
T Consensus 82 ~~~gg~L 88 (377)
T cd05629 82 FLPGGDL 88 (377)
T ss_pred CCCCCcH
Confidence 9998755
No 109
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.74 E-value=9.8e-05 Score=68.85 Aligned_cols=75 Identities=16% Similarity=0.096 Sum_probs=50.3
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.||++... +..+++|+.... ....+..|..++..+.. -.+++++..... .+..++|||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~E 81 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN---PWVVKLYYSFQD-ENYLYLIME 81 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceEEEEEc-CCeEEEEEC
Confidence 567888999999998764 236888987531 12234567777776642 235555554332 568899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|..+
T Consensus 82 ~~~~g~L 88 (364)
T cd05599 82 YLPGGDM 88 (364)
T ss_pred CCCCcHH
Confidence 9998644
No 110
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.73 E-value=0.00049 Score=60.79 Aligned_cols=74 Identities=23% Similarity=0.248 Sum_probs=48.4
Q ss_pred EeEeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
.+.++.|..+.+|++...++ .+++|...... ...+..|.++++.+... -.+| ++.... .+..+++||+++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~--~i~~-~~~~~~--~~~~~~v~e~~~~~ 85 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHD--KLVP-LYAVVS--EEPIYIVTEFMGKG 85 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCC--Ceee-EEEEEc--CCCcEEEEEcCCCC
Confidence 35678888899999876543 78889865422 23456788877777532 1222 333221 45789999999986
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
++
T Consensus 86 ~L 87 (260)
T cd05069 86 SL 87 (260)
T ss_pred CH
Confidence 54
No 111
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.73 E-value=0.00012 Score=67.36 Aligned_cols=75 Identities=19% Similarity=0.123 Sum_probs=48.0
Q ss_pred EeEeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|....+|++... + ..+++|..... ....+..|..+++.+.. -.+++++..... .+..++|||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS---PWIPQLQYAFQD-KDNLYLVME 81 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCeEEEEEC
Confidence 466788889999998764 3 36888887531 12335566666554432 234555543322 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|..+
T Consensus 82 ~~~~~~L 88 (330)
T cd05601 82 YQPGGDL 88 (330)
T ss_pred CCCCCCH
Confidence 9998754
No 112
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.72 E-value=0.00048 Score=60.63 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=52.5
Q ss_pred eeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 52 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
.-.+.++.|..+.+|+++..++ .+++|..... ....+..|...++.+... .+.+++..... .+..+++|||++
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~iv~e~~~ 82 (256)
T cd05114 7 TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHP---KLVQLYGVCTQ-QKPLYIVTEFME 82 (256)
T ss_pred EEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCC---CceeEEEEEcc-CCCEEEEEEcCC
Confidence 3356788898999999887655 7888876542 234566788888777531 23444444332 467899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|..+
T Consensus 83 ~~~L 86 (256)
T cd05114 83 NGCL 86 (256)
T ss_pred CCcH
Confidence 8755
No 113
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.72 E-value=0.0007 Score=60.93 Aligned_cols=75 Identities=15% Similarity=0.082 Sum_probs=48.8
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.++.|....+|++.... ..+++|....... ..+..|...++.+.. -.+++++..... ++..+++|||++
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 92 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH---PYIVKLLGAFYW-DGKLWIMIEFCP 92 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CcEeeeEEEEEe-CCeEEEEEecCC
Confidence 4457888889999998743 3688888764332 234456666665542 234555544332 578999999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|..+
T Consensus 93 ~~~l 96 (292)
T cd06644 93 GGAV 96 (292)
T ss_pred CCcH
Confidence 8754
No 114
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.71 E-value=0.00064 Score=62.41 Aligned_cols=73 Identities=11% Similarity=-0.058 Sum_probs=44.4
Q ss_pred EeCCccccceEEEEeC-C-ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTD-A-GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++... + ..+.+|+.... . ...+..|.++++.+.. -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h---p~i~~~~~~~~~-~~~~~lv~E~~ 77 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH---PFLTALKYSFQT-HDRLCFVMEYA 77 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCCceEEEEEc-CCEEEEEEeCC
Confidence 4678889999998753 3 36888887531 1 1223345555554432 234455443322 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 78 ~~~~L 82 (325)
T cd05594 78 NGGEL 82 (325)
T ss_pred CCCcH
Confidence 98654
No 115
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.71 E-value=0.00028 Score=65.03 Aligned_cols=75 Identities=12% Similarity=0.048 Sum_probs=48.9
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.||++... +..|++|+.... ....+..|..++..+.. -.++.++..... ++..|+|||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR---RWITNLHYAFQD-ENNLYLVMD 81 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCceEEEEec-CCeEEEEEe
Confidence 567888999999998764 337888986421 12335566666655532 234555544332 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 82 ~~~g~~L 88 (331)
T cd05597 82 YYVGGDL 88 (331)
T ss_pred cCCCCcH
Confidence 9998765
No 116
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.70 E-value=0.00055 Score=60.40 Aligned_cols=78 Identities=22% Similarity=0.219 Sum_probs=51.7
Q ss_pred eeeEeEeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 51 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
..-.+.++.|..+.+|+....++ .+++|...... ...+..|...++.+.. -.+++++..... .+..+++||++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 83 (261)
T cd05068 8 IQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH---PKLIQLYAVCTL-EEPIYIVTELM 83 (261)
T ss_pred eeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCC---CCccceeEEEec-CCCeeeeeecc
Confidence 34457788888899999775443 68888876432 3446678777777753 234455544322 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 84 ~~~~L 88 (261)
T cd05068 84 KYGSL 88 (261)
T ss_pred cCCcH
Confidence 88755
No 117
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.70 E-value=0.00047 Score=62.80 Aligned_cols=75 Identities=13% Similarity=0.010 Sum_probs=50.8
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.+.++.|..+.+|++...+ ..+++|...... ...+..|.+.++.+.. -.+++++..... .+..+++||
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e 81 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH---PFLPTLYASFQT-ETYLCLVMD 81 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC---CCchhheeeeec-CCEEEEEEE
Confidence 4567888889999998743 478999876421 1235567777776652 245666654432 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|.++
T Consensus 82 ~~~~~~L 88 (316)
T cd05574 82 YCPGGEL 88 (316)
T ss_pred ecCCCCH
Confidence 9998754
No 118
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.70 E-value=0.00041 Score=61.22 Aligned_cols=78 Identities=22% Similarity=0.166 Sum_probs=51.7
Q ss_pred eeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 51 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
..-++.++.|..+.+|+....++ .+++|..... ....+..|..+++.+... .+.+++..... .+..+++||++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~~ 83 (261)
T cd05072 8 IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD---KLVRLYAVVTK-EEPIYIITEYM 83 (261)
T ss_pred eEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCC---CeeeEEEEEcC-CCCcEEEEecC
Confidence 44567788898999999876544 6888876532 234456788777776432 34444433322 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 84 ~~~~L 88 (261)
T cd05072 84 AKGSL 88 (261)
T ss_pred CCCcH
Confidence 98765
No 119
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.69 E-value=0.00023 Score=66.80 Aligned_cols=78 Identities=13% Similarity=0.078 Sum_probs=48.6
Q ss_pred eeeEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 51 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
-.-++.++.|..+.||++.... ..+.+|+.... ....+..|..+++.+.. -.+.+++..... ++..++
T Consensus 45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~l 120 (370)
T cd05621 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFCAFQD-DKYLYM 120 (370)
T ss_pred CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEE
Confidence 3445668899999999988643 36788876421 12234556666655432 123444433222 467899
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
||||++|+.+
T Consensus 121 v~Ey~~gg~L 130 (370)
T cd05621 121 VMEYMPGGDL 130 (370)
T ss_pred EEcCCCCCcH
Confidence 9999998765
No 120
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.69 E-value=0.00017 Score=66.42 Aligned_cols=77 Identities=12% Similarity=-0.006 Sum_probs=51.1
Q ss_pred eeEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 52 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
.-.+.++.|....||++.... ..+++|..... ....+..|..+++.+.. -.+.+++..... ++..+++
T Consensus 21 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv 96 (329)
T PTZ00263 21 EMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH---PFIVNMMCSFQD-ENRVYFL 96 (329)
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCcEEEEEEc-CCEEEEE
Confidence 335668889999999997642 36888976431 12335678777777643 234555544332 5688999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|.++
T Consensus 97 ~e~~~~~~L 105 (329)
T PTZ00263 97 LEFVVGGEL 105 (329)
T ss_pred EcCCCCChH
Confidence 999998755
No 121
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.69 E-value=0.00026 Score=64.80 Aligned_cols=74 Identities=16% Similarity=0.084 Sum_probs=45.4
Q ss_pred EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++.... ..+++|..... .......|..++..+..+ ..+++++..... .+..|++|||+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E~~ 78 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWEN--PFLTHLYCTFQT-KEHLFFVMEFL 78 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CCccCeeEEEEe-CCEEEEEECCC
Confidence 46778889999998642 36888886531 122234455555443332 234555544332 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 79 ~~g~L 83 (316)
T cd05620 79 NGGDL 83 (316)
T ss_pred CCCcH
Confidence 98754
No 122
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.69 E-value=0.00016 Score=67.96 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=49.3
Q ss_pred eeeEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 51 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
..-++.++.|..+.+|++.... ..+++|+.... ....+..|..+++.+.. -.+++++..... .+..++
T Consensus 45 y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~l 120 (371)
T cd05622 45 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQD-DRYLYM 120 (371)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEc-CCEEEE
Confidence 3446678889999999998743 36888886421 12234456666655532 224445443322 467899
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+|||++|+.+
T Consensus 121 v~Ey~~gg~L 130 (371)
T cd05622 121 VMEYMPGGDL 130 (371)
T ss_pred EEcCCCCCcH
Confidence 9999998765
No 123
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.69 E-value=0.0002 Score=66.34 Aligned_cols=76 Identities=13% Similarity=0.006 Sum_probs=49.4
Q ss_pred eEeEeCCccccceEEEEeC-Cc--cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 53 KICPVGGGCINLASRYGTD-AG--SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~-~~--~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
-++.++.|..+.||++... .+ .+++|.... .....+..|..+++.+.. -.+.+++..... .+..+++
T Consensus 34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~Iv~~~~~~~~-~~~~~lv 109 (340)
T PTZ00426 34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH---PFCVNLYGSFKD-ESYLYLV 109 (340)
T ss_pred EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCCcceEEEEEe-CCEEEEE
Confidence 3567888999999998743 22 588887642 112335567777776643 234455544332 4678999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|+.+
T Consensus 110 ~Ey~~~g~L 118 (340)
T PTZ00426 110 LEFVIGGEF 118 (340)
T ss_pred EeCCCCCcH
Confidence 999998754
No 124
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.68 E-value=0.00024 Score=65.44 Aligned_cols=74 Identities=9% Similarity=0.023 Sum_probs=48.0
Q ss_pred EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++.... ..+++|+.... ....+..|..+++.+..+ -.+++++..... .+..|++|||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~h--p~Iv~~~~~~~~-~~~~~lv~e~~ 78 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNH--PFLVGLHSCFQT-ESRLFFVIEFV 78 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CCCCceEEEEEc-CCEEEEEEeCC
Confidence 36778889999998643 36888887531 123355677777666543 234555544332 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 79 ~~g~L 83 (329)
T cd05588 79 SGGDL 83 (329)
T ss_pred CCCCH
Confidence 98754
No 125
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.67 E-value=0.00029 Score=64.59 Aligned_cols=76 Identities=12% Similarity=0.033 Sum_probs=45.1
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.||++.... ..+.+|+.... .......|..++..+..+ -.++.++..... .+..++|||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E 81 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP--PFLTQLHSCFQT-MDRLYFVME 81 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CeEeeEEEEEec-CCEEEEEEc
Confidence 4567888899999987643 36888876531 111223444444443221 123444433322 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|+++
T Consensus 82 ~~~~g~L 88 (323)
T cd05616 82 YVNGGDL 88 (323)
T ss_pred CCCCCCH
Confidence 9998754
No 126
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=97.66 E-value=0.00024 Score=64.55 Aligned_cols=133 Identities=15% Similarity=0.186 Sum_probs=85.4
Q ss_pred EeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++-+|-|....||.|...+ + -|-+|.-.. .+.+...+|..+|..+.. |+-|.-.+.... .+.-|+|++
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h--PFiv~l~ysFQt--~~kLylVld 105 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH--PFIVKLIYSFQT--EEKLYLVLD 105 (357)
T ss_pred eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC--CcEeeeEEeccc--CCeEEEEEe
Confidence 4457888999999998643 3 466666543 123556788888887543 666766665543 478899999
Q ss_pred eecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 020393 126 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 205 (326)
Q Consensus 126 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 205 (326)
|+.|+.+ ..|-.... .| .++-..||.. + .
T Consensus 106 ~~~GGeL------------f~hL~~eg--~F-----------------~E~~arfYla--------E------------i 134 (357)
T KOG0598|consen 106 YLNGGEL------------FYHLQREG--RF-----------------SEDRARFYLA--------E------------I 134 (357)
T ss_pred ccCCccH------------HHHHHhcC--Cc-----------------chhHHHHHHH--------H------------H
Confidence 9999866 34433221 12 1222333432 1 1
Q ss_pred HHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 206 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 206 ~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
+. .+. .| ....+||+|++|.|||++.+|...+-|+.
T Consensus 135 ~l----AL~-~L----H~~gIiyRDlKPENILLd~~GHi~LtDFg 170 (357)
T KOG0598|consen 135 VL----ALG-YL----HSKGIIYRDLKPENILLDEQGHIKLTDFG 170 (357)
T ss_pred HH----HHH-HH----HhCCeeeccCCHHHeeecCCCcEEEeccc
Confidence 11 111 11 24589999999999999999999999975
No 127
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.66 E-value=0.0002 Score=63.79 Aligned_cols=74 Identities=19% Similarity=0.137 Sum_probs=49.2
Q ss_pred eEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 55 CPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
+.++.|....+|+....+ ..+.+|...... ...+..|.++++.+.. -.+.+++..... .+..+++
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv 86 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH---ENIVKFYGVCTE-GDPPIMV 86 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCC---CCchheeeEEec-CCCeEEE
Confidence 456778888899876522 368888875422 2346678888777753 234455544333 4688999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
||+++|.++
T Consensus 87 ~e~~~~~~L 95 (280)
T cd05049 87 FEYMEHGDL 95 (280)
T ss_pred EecCCCCCH
Confidence 999999865
No 128
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.66 E-value=0.00069 Score=61.28 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=50.4
Q ss_pred ceeeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.-.-++.++.|..+.+|++... +..+++|..... ....+..|..+++.+.. ..+.+++..... .+..+++|
T Consensus 20 ~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~ 95 (297)
T cd06656 20 KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVM 95 (297)
T ss_pred hceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CCEEEEee
Confidence 3445677888889999998752 347888877532 12335566666665532 234444443222 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|..+
T Consensus 96 e~~~~~~L 103 (297)
T cd06656 96 EYLAGGSL 103 (297)
T ss_pred cccCCCCH
Confidence 99998754
No 129
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.66 E-value=0.00036 Score=64.15 Aligned_cols=139 Identities=19% Similarity=0.237 Sum_probs=85.8
Q ss_pred CCccccceEEEEeCCc-cEEEEecCCC-------------------------Ccch----HHHHHHHHHHHHhcCCCCCc
Q 020393 58 GGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSM----FEGEALGLGAMYETRTIRAP 107 (326)
Q Consensus 58 ~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~----~~~E~~~l~~L~~~~~~~vP 107 (326)
+.|-..-||-++..+| .|.+|++... ++.+ .++|.+-|..|.+. ++|+|
T Consensus 153 STGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a-GIP~P 231 (520)
T KOG2270|consen 153 STGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA-GIPCP 231 (520)
T ss_pred ccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc-CCCCC
Confidence 3445566999988777 6888987420 1111 25788888889886 69999
Q ss_pred ceeeecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhH
Q 020393 108 RPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLG 187 (326)
Q Consensus 108 ~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~ 187 (326)
+|+.-. .+.+||+++.+... +.|.... .. +.
T Consensus 232 ePIlLk-----~hVLVM~FlGrdgw--------------------------~aPkLKd-----~~-------------ls 262 (520)
T KOG2270|consen 232 EPILLK-----NHVLVMEFLGRDGW--------------------------AAPKLKD-----AS-------------LS 262 (520)
T ss_pred Cceeee-----cceEeeeeccCCCC--------------------------cCccccc-----cc-------------CC
Confidence 999876 67999999964321 1110000 00 00
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEc-c-ccccCch-hhhhhh
Q 020393 188 YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD-P-ACYYGHN-EAEFGM 262 (326)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID-~-~~~~G~~-~~Dla~ 262 (326)
.+...+....++..+..+.+ ...|||+||.--|+|+.+ |.+.||| . .+-..|| ..|+-.
T Consensus 263 -----------~~ka~~~Y~~~v~~MR~lY~----~c~LVHADLSEfN~Lyhd-G~lyiIDVSQSVE~DHP~aldFLR 324 (520)
T KOG2270|consen 263 -----------TSKARELYQQCVRIMRRLYQ----KCRLVHADLSEFNLLYHD-GKLYIIDVSQSVEHDHPHALDFLR 324 (520)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHH----HhceeccchhhhhheEEC-CEEEEEEccccccCCChhHHHHHH
Confidence 00011222333333343332 468999999999999965 5699999 4 4557777 456654
No 130
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.65 E-value=0.00021 Score=64.48 Aligned_cols=75 Identities=17% Similarity=0.083 Sum_probs=48.3
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.+|++... +..+++|..... ....+..|..+++.+.. -.+.+++..... .+..+++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e 81 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH---PFIIRLFWTEHD-QRFLYMLME 81 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC---CcHhhhHhhhcc-CCeEEEEEe
Confidence 566888999999999864 336888986421 12335567777666642 123444433222 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 82 ~~~~~~L 88 (291)
T cd05612 82 YVPGGEL 88 (291)
T ss_pred CCCCCCH
Confidence 9998654
No 131
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.65 E-value=0.00044 Score=63.67 Aligned_cols=78 Identities=17% Similarity=0.047 Sum_probs=51.7
Q ss_pred eeeEeEeCCccccceEEEEeCC-c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
-.-++.++.|....+|++.... + .+.+|...... ...+..|.++++.+.. -.+.+++..... ++..+++|
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~ 82 (331)
T cd06649 7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICM 82 (331)
T ss_pred ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CCCCeEEEEEEE-CCEEEEEe
Confidence 3446778999999999998753 3 57777765321 2346678777776643 234555544322 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|.++
T Consensus 83 e~~~~~~L 90 (331)
T cd06649 83 EHMDGGSL 90 (331)
T ss_pred ecCCCCcH
Confidence 99998765
No 132
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=97.65 E-value=0.00052 Score=60.25 Aligned_cols=75 Identities=17% Similarity=0.054 Sum_probs=51.7
Q ss_pred EeEeCCccccceEEEEeCCc--cEEEEecCCCCcch-----HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTDAG--SFFVKTNRSIGPSM-----FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~~~~~-----~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++.++.|....||++..... .|++|+........ ...|...++.+.. -.+++++..... ....+++|++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~v~~~ 79 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH---PNIVQILDVFQD-DNYLYIVMEY 79 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB---TTBCHEEEEEEE-SSEEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc---cccccccccccc-cccccccccc
Confidence 56788899999999988654 69999987542111 1237778888842 235556655433 5688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 80 ~~~~~L 85 (260)
T PF00069_consen 80 CPGGSL 85 (260)
T ss_dssp ETTEBH
T ss_pred cccccc
Confidence 998643
No 133
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.64 E-value=0.00017 Score=66.34 Aligned_cols=74 Identities=9% Similarity=0.036 Sum_probs=47.3
Q ss_pred EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++.... ..+.+|+.... ....+..|..++..+..+ -.++.++..... .+..++|||++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~lv~e~~ 78 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSN--PFLVGLHSCFQT-TSRLFLVIEYV 78 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCC--CCEeeEEEEEEe-CCEEEEEEeCC
Confidence 47788899999997643 36888887531 112345666666665433 234555543322 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 79 ~~~~L 83 (327)
T cd05617 79 NGGDL 83 (327)
T ss_pred CCCcH
Confidence 98755
No 134
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.64 E-value=0.00027 Score=71.62 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=49.8
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
-++.++.|....||+.... +..+.+|+..... ...+..|...+..+... .+.+++..... .+..|+||
T Consensus 8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp---~Iv~~~~~~~~-~~~~~lVm 83 (669)
T cd05610 8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSP---FIVHLYYSLQS-ANNVYLVM 83 (669)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCC---CcCeEEEEEEE-CCEEEEEE
Confidence 3567888999999999875 3478889875421 13455677666655431 23444433322 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|..+
T Consensus 84 Ey~~g~~L 91 (669)
T cd05610 84 EYLIGGDV 91 (669)
T ss_pred eCCCCCCH
Confidence 99998755
No 135
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.64 E-value=0.00062 Score=59.95 Aligned_cols=75 Identities=20% Similarity=0.155 Sum_probs=50.9
Q ss_pred EeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
.+.++.|..+.+|+....++ .+++|..... ....+..|...++.+.. ..+++++..... ....+++||+++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~~~ 86 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH---DKLVQLYAVCSE-EEPIYIVTEYMSKG 86 (261)
T ss_pred eeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCC---CCEeeeeeeeec-CCceEEEEeccCCC
Confidence 45678888899999876543 6888887643 23456678777777653 235555544332 46789999999987
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
++
T Consensus 87 ~L 88 (261)
T cd05034 87 SL 88 (261)
T ss_pred CH
Confidence 55
No 136
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.64 E-value=0.0005 Score=61.53 Aligned_cols=77 Identities=17% Similarity=0.094 Sum_probs=51.6
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeeccc---C-CCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---P-TGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~-~~~~~~v~e 125 (326)
++.++.|..+.+|++... +..+++|..... ....+..|..+++.+.++ -.+++++..... . .+..+++||
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~~~~lv~e 100 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH--PNVVKFYGMYYKKDVKNGDQLWLVLE 100 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcC--CCeeeeeeeeeecccCCCCeEEEEEe
Confidence 456788888999998763 237888986542 124466788888888654 245555543211 1 356899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 101 ~~~~~~L 107 (286)
T cd06638 101 LCNGGSV 107 (286)
T ss_pred ecCCCCH
Confidence 9999765
No 137
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.63 E-value=0.00051 Score=66.80 Aligned_cols=75 Identities=16% Similarity=-0.010 Sum_probs=48.3
Q ss_pred EeEeCCccccceEEEEeC---CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTD---AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~---~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.+.++.|....+|+.... ...+++|...... ...++.|..++..+.. -.+++++..... .+..|+||||+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H---pniv~~~~~~~~-~~~~~lv~E~~ 147 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH---FGIVKHFDDFKS-DDKLLLIMEYG 147 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEEE-CCEEEEEEECC
Confidence 345677788889988653 2367788654322 2335567776665542 235666654433 57899999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|+++
T Consensus 148 ~gg~L 152 (478)
T PTZ00267 148 SGGDL 152 (478)
T ss_pred CCCCH
Confidence 99866
No 138
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.63 E-value=0.00044 Score=60.81 Aligned_cols=74 Identities=19% Similarity=0.150 Sum_probs=49.8
Q ss_pred EeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 54 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
.+.++.|..+.+|+....+..+++|..... ....+..|...++.+... .+.+++.... .+..+++||+++|.++
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~---~i~~~~~~~~--~~~~~~v~e~~~~~~L 85 (254)
T cd05083 11 GEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHK---NLVRLLGVIL--HNGLYIVMELMSKGNL 85 (254)
T ss_pred eeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCC---CcCeEEEEEc--CCCcEEEEECCCCCCH
Confidence 456778888899998766678999988653 234466787777766432 2344443322 3457999999998755
No 139
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.63 E-value=0.00071 Score=59.73 Aligned_cols=78 Identities=21% Similarity=0.148 Sum_probs=51.1
Q ss_pred ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
...-.+.++.|..+.+|++...++ .+++|...... ...+..|..+++.+... .+.+++.... ....+++||+
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~--~~~~~~v~e~ 81 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD---KLVKLHAVVT--KEPIYIITEF 81 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCC---CcceEEEEEc--CCCeEEEEEe
Confidence 455567788899999999976544 68888775432 23466788888777532 1222222222 3578999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 82 ~~~~~L 87 (260)
T cd05073 82 MAKGSL 87 (260)
T ss_pred CCCCcH
Confidence 998654
No 140
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.62 E-value=0.00045 Score=62.16 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=48.0
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
-++.++.|..+.||+.... +..+.+|..... ....+..|..+++.+.. -.+.+++..... ++..+++||+
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~e~ 84 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH---ANIVTLHDIIHT-ERCLTLVFEY 84 (288)
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC---CCEeeEEEEEcC-CCeEEEEEeC
Confidence 3567888999999998764 336888876431 12345578888777743 234455544332 4578999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
++|
T Consensus 85 ~~~ 87 (288)
T cd07871 85 LDS 87 (288)
T ss_pred CCc
Confidence 986
No 141
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.62 E-value=0.00024 Score=65.05 Aligned_cols=74 Identities=15% Similarity=0.083 Sum_probs=44.3
Q ss_pred EeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++...+ + .+++|..... .......|..++..+..+ -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~i~~~~~~~~~-~~~~~lv~e~~ 78 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEH--PFLTHLFCTFQT-KEHLFFVMEYL 78 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence 46788999999997643 3 5888876431 112223344444433222 234555544332 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 79 ~gg~L 83 (316)
T cd05592 79 NGGDL 83 (316)
T ss_pred CCCcH
Confidence 98754
No 142
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.62 E-value=0.00063 Score=60.02 Aligned_cols=74 Identities=23% Similarity=0.235 Sum_probs=50.5
Q ss_pred EeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
++.++.|..+.+|++...++ .+++|..... ....+..|..+++.+... .+.+++.... .+..+++|++++|.
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~--~~~~~~v~e~~~~~ 85 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHP---RLVRLYAVVT--QEPIYIITEYMENG 85 (260)
T ss_pred eeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCc---CeeeEEEEEc--cCCcEEEEEcCCCC
Confidence 46688899999999887554 7888977642 234566788888777532 2333443321 45789999999987
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
++
T Consensus 86 ~L 87 (260)
T cd05067 86 SL 87 (260)
T ss_pred CH
Confidence 54
No 143
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.62 E-value=0.00064 Score=62.35 Aligned_cols=73 Identities=12% Similarity=-0.013 Sum_probs=44.9
Q ss_pred EeCCccccceEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++... ++ .|++|+.... . ...+..|..+++.+.. -.+.+++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~ 77 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH---PFLTALKYSFQT-HDRLCFVMEYA 77 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCCEEEEEEc-CCEEEEEEeCC
Confidence 4677889999998763 33 6888976531 1 1223456666655532 123444433222 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 78 ~~~~L 82 (323)
T cd05571 78 NGGEL 82 (323)
T ss_pred CCCcH
Confidence 98654
No 144
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.61 E-value=0.0012 Score=57.84 Aligned_cols=74 Identities=19% Similarity=0.100 Sum_probs=51.3
Q ss_pred eEeCCccccceEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 55 CPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
+.++.|..+.+|+....+ ..+++|...... ...+..|...++.+. + -.+.+++..... .+..+++|
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-~--~~i~~~~~~~~~-~~~~~~i~ 80 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD-H--PNIVKLLGVCTE-EEPLMIVM 80 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC-C--CchheEEEEEcC-CCeeEEEE
Confidence 567888889999988754 468889886532 335667888887773 2 235555554433 46899999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
++.+|.++
T Consensus 81 e~~~~~~l 88 (258)
T smart00219 81 EYMEGGDL 88 (258)
T ss_pred eccCCCCH
Confidence 99998654
No 145
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.61 E-value=0.00037 Score=63.97 Aligned_cols=76 Identities=12% Similarity=0.047 Sum_probs=47.3
Q ss_pred EeEeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
...++.|..+.||++... ++ .|.+|+.... ....+..|..++..+... -.++.++..... .+..|+|||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E 81 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP--PFLTQLHSCFQT-VDRLYFVME 81 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CchhheeeEEec-CCEEEEEEc
Confidence 456788999999998764 33 6888986531 112234566655544332 234555443322 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 82 y~~~g~L 88 (323)
T cd05615 82 YVNGGDL 88 (323)
T ss_pred CCCCCcH
Confidence 9998754
No 146
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.60 E-value=0.00028 Score=65.07 Aligned_cols=75 Identities=13% Similarity=0.014 Sum_probs=45.7
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.||++.... ..+++|+.... ....+..|..++..+.. -.++.++..... .+..|++||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~l~~~~~~-~~~~~lv~E 81 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC---QWITTLHYAFQD-ENYLYLVMD 81 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEEEe
Confidence 5678889999999987643 36888876431 11223445554443321 123444433322 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|+.+
T Consensus 82 y~~gg~L 88 (331)
T cd05624 82 YYVGGDL 88 (331)
T ss_pred CCCCCcH
Confidence 9999765
No 147
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.60 E-value=0.00094 Score=58.42 Aligned_cols=73 Identities=25% Similarity=0.136 Sum_probs=47.8
Q ss_pred EeCCccccceEEEEeCC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 56 PVGGGCINLASRYGTDA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
.++.|..+.+|++...+ ..+++|...... ...+..|..+++.+.. -.+++++..... .+..+++||+++|.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~~~~~ 77 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH---PNIVKLIGVCVQ-KQPIYIVMELVPGG 77 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeEEEEEEEec-CCCeEEEEEcCCCC
Confidence 46778888999998754 478889876432 2245567776666542 124444444332 46789999999987
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
++
T Consensus 78 ~l 79 (251)
T cd05041 78 SL 79 (251)
T ss_pred cH
Confidence 54
No 148
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.59 E-value=0.00062 Score=62.49 Aligned_cols=73 Identities=12% Similarity=-0.036 Sum_probs=45.6
Q ss_pred EeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++... + ..+++|..... ....+..|..+++.+.. -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~E~~ 77 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH---PFLTALKYAFQT-HDRLCFVMEYA 77 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCEEEEEEeCC
Confidence 4677888999998763 3 36888987531 11223456666665542 124444433322 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 78 ~~~~L 82 (323)
T cd05595 78 NGGEL 82 (323)
T ss_pred CCCcH
Confidence 98754
No 149
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.58 E-value=0.00069 Score=60.83 Aligned_cols=76 Identities=11% Similarity=0.000 Sum_probs=48.0
Q ss_pred EeEeCCccccceEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 54 ICPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
.+.++.|..+.+|++... + ..+++|..... ....+..|..+++.+..+ -.++.++..... ++..+
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~ 81 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS--PFLVTLHYAFQT-DTKLH 81 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccC--CChhceeeEeec-CCeEE
Confidence 456788888999998752 3 36888877531 113345677777777543 234444433222 45778
Q ss_pred EEEeeecCCCC
Q 020393 122 IIMEFIEFGSS 132 (326)
Q Consensus 122 ~v~e~l~G~~~ 132 (326)
++||+++|..+
T Consensus 82 lv~e~~~~~~L 92 (290)
T cd05613 82 LILDYINGGEL 92 (290)
T ss_pred EEEecCCCCcH
Confidence 99999998654
No 150
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.58 E-value=0.00044 Score=61.00 Aligned_cols=74 Identities=22% Similarity=0.213 Sum_probs=49.1
Q ss_pred EeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
++.++.|..+.+|++...++ .+++|..... ....+..|..+++.+... .+.+++.... ++..+++|++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~--~~~~~lv~e~~~~~ 85 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHD---KLVQLYAVVS--EEPIYIVTEYMSKG 85 (260)
T ss_pred hheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCC---ceEEEEeEEC--CCCcEEEEEecCCC
Confidence 35678888899999976554 7888877642 234567788888877532 2223332221 45679999999987
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
++
T Consensus 86 ~L 87 (260)
T cd05070 86 SL 87 (260)
T ss_pred cH
Confidence 54
No 151
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.57 E-value=0.00088 Score=61.65 Aligned_cols=73 Identities=11% Similarity=-0.031 Sum_probs=45.1
Q ss_pred EeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++... + ..+++|+.... ....+..|..+++.+.. -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~Ey~ 77 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH---PFLTSLKYSFQT-KDRLCFVMEYV 77 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceEEEEEc-CCEEEEEEeCC
Confidence 4677888999998764 2 36888987531 11234456666655532 123444433322 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 78 ~~g~L 82 (328)
T cd05593 78 NGGEL 82 (328)
T ss_pred CCCCH
Confidence 98654
No 152
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.57 E-value=0.0004 Score=63.94 Aligned_cols=74 Identities=8% Similarity=0.016 Sum_probs=46.2
Q ss_pred EeCCccccceEEEEeCC--ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDA--GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++.... ..+.+|+.... . ...+..|..++..+..+ -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~E~~ 78 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH--PFLVGLHSCFQT-ESRLFFVIEYV 78 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCC--CcCCceeeEEEe-CCEEEEEEeCC
Confidence 46788899999997643 36888886531 1 12244566655555333 234455544332 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 79 ~~~~L 83 (329)
T cd05618 79 NGGDL 83 (329)
T ss_pred CCCCH
Confidence 98754
No 153
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.56 E-value=0.00074 Score=61.36 Aligned_cols=74 Identities=12% Similarity=0.079 Sum_probs=48.1
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.-++.++.|..+.+|+.+.. +..+++|..... ....+..|...++.+.. -.+.+++..... ++..+++||
T Consensus 9 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e 84 (309)
T cd07872 9 IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIVHT-DKSLTLVFE 84 (309)
T ss_pred EEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCC---CCcceEEEEEee-CCeEEEEEe
Confidence 44677888999999998764 336888876431 12234568777777643 234445544332 568899999
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
|+++
T Consensus 85 ~~~~ 88 (309)
T cd07872 85 YLDK 88 (309)
T ss_pred CCCC
Confidence 9875
No 154
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.56 E-value=0.00065 Score=61.56 Aligned_cols=73 Identities=14% Similarity=0.065 Sum_probs=47.9
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
-++.++.|..+.||++... +..+++|+.... .......|..+++.+... .+.+++..... ....+++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~-~~~~~lv~e~ 84 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHA---NIVLLHDIIHT-KETLTLVFEY 84 (303)
T ss_pred EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCC---CcCeEEEEEec-CCeEEEEEEC
Confidence 4577888999999999864 337888987532 122345688777776432 23444443322 4678999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
++|
T Consensus 85 ~~~ 87 (303)
T cd07869 85 VHT 87 (303)
T ss_pred CCc
Confidence 976
No 155
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.55 E-value=0.00058 Score=62.65 Aligned_cols=27 Identities=30% Similarity=0.272 Sum_probs=24.0
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.|||++.++...|+|+.
T Consensus 115 ~giiHrDlkp~Nili~~~~~~kl~DfG 141 (325)
T cd05602 115 LNIVYRDLKPENILLDSQGHIVLTDFG 141 (325)
T ss_pred CCeEecCCCHHHeEECCCCCEEEccCC
Confidence 479999999999999988878899974
No 156
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.55 E-value=0.00063 Score=70.28 Aligned_cols=75 Identities=16% Similarity=0.044 Sum_probs=49.8
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.||+.... +..+++|..+.. . ...+..|.+++..+.. -.+++++..... .+..+++||
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H---PNIVkl~~v~~d-~~~lyLVME 82 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH---PGIVPVYSICSD-GDPVYYTMP 82 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC---cCcCeEEEEEee-CCEEEEEEE
Confidence 456888899999998764 337888987532 1 1235567777766643 234455544332 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 83 Y~eGGSL 89 (932)
T PRK13184 83 YIEGYTL 89 (932)
T ss_pred cCCCCCH
Confidence 9999765
No 157
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.55 E-value=0.00025 Score=64.69 Aligned_cols=72 Identities=15% Similarity=0.067 Sum_probs=43.5
Q ss_pred eCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|..+.+|++...+ ..+.+|..... ....+..|..++..+.. + .+.+++..... .+..+++|||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~-~~~~~lv~e~~~ 76 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC--P-FIVPLKFSFQS-PEKLYLVLAFIN 76 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--C-cEeceeeEEec-CCeEEEEEcCCC
Confidence 4668888999987643 36888876421 11234456666666532 1 22333332222 468899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|..+
T Consensus 77 ~g~L 80 (312)
T cd05585 77 GGEL 80 (312)
T ss_pred CCcH
Confidence 8754
No 158
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.55 E-value=0.00087 Score=61.84 Aligned_cols=76 Identities=18% Similarity=0.052 Sum_probs=50.4
Q ss_pred eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
-++.++.|..+.+|+.... ++ .+++|+.... . ...+..|.++++.+.. -.+.+++..... ++..+++|||
T Consensus 9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~ 84 (333)
T cd06650 9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICMEH 84 (333)
T ss_pred eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CcccceeEEEEE-CCEEEEEEec
Confidence 3566888889999998764 33 5666765432 1 2345678888777753 235555544333 5689999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 85 ~~~~~L 90 (333)
T cd06650 85 MDGGSL 90 (333)
T ss_pred CCCCcH
Confidence 998765
No 159
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.54 E-value=0.00016 Score=66.64 Aligned_cols=73 Identities=15% Similarity=0.125 Sum_probs=48.6
Q ss_pred EeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 56 PVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++|.|.+..||+-.... + .+.+|.-... ..+.+..|..+|+.|.. -.+-+++..... ++..|+||||+.
T Consensus 17 ~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H---~nIV~l~d~~~~-~~~i~lVMEyC~ 92 (429)
T KOG0595|consen 17 EIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH---PNIVRLLDCIED-DDFIYLVMEYCN 92 (429)
T ss_pred hccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC---cceeeEEEEEec-CCeEEEEEEeCC
Confidence 38999999999976543 3 5666655432 23456788888887763 123344433332 578999999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|+++
T Consensus 93 gGDL 96 (429)
T KOG0595|consen 93 GGDL 96 (429)
T ss_pred CCCH
Confidence 9876
No 160
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.53 E-value=0.00063 Score=59.90 Aligned_cols=76 Identities=14% Similarity=0.082 Sum_probs=49.6
Q ss_pred eEeEeCCccccceEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 53 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
-.+.++.|..+.+|++...+ +.+++|..... ....+..|.+.++.+.. -.+++++..... .+..+++||+++|
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~ 83 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH---PNLVQLYGVCTK-QRPIFIVTEYMAN 83 (256)
T ss_pred hhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCC---CCEEEEEEEEcC-CCceEEEEecCCC
Confidence 34557778888999987644 37899987542 22345567777776642 124455544332 4678999999998
Q ss_pred CCC
Q 020393 130 GSS 132 (326)
Q Consensus 130 ~~~ 132 (326)
..+
T Consensus 84 ~~L 86 (256)
T cd05059 84 GCL 86 (256)
T ss_pred CCH
Confidence 755
No 161
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.52 E-value=0.0013 Score=59.58 Aligned_cols=75 Identities=16% Similarity=0.156 Sum_probs=48.3
Q ss_pred eEeCCccccceEEEEeC-Cc-c--EEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 55 CPVGGGCINLASRYGTD-AG-S--FFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~-~~-~--~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
+.++.|..+.+|++... ++ . +.+|..... . ...+..|.+.+..+..+ -.+++++..... ++..|++|||
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h--~~iv~~~~~~~~-~~~~~lv~e~ 89 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLAIEY 89 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCC--CCcceEEEEECC-CCCceEEEEe
Confidence 45788889999999753 23 2 344544321 1 22356688888777543 235666655433 5689999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 90 ~~~~~L 95 (303)
T cd05088 90 APHGNL 95 (303)
T ss_pred CCCCcH
Confidence 998754
No 162
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.52 E-value=0.0017 Score=58.79 Aligned_cols=77 Identities=18% Similarity=0.046 Sum_probs=48.7
Q ss_pred eeEeEeCCccccceEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcce
Q 020393 52 TKICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRP 109 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~-----------------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~ 109 (326)
.-.+.++.|....||++...+ + .+.+|...... ...+..|...+..+.. -.+.++
T Consensus 8 ~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~ 84 (304)
T cd05096 8 LFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD---PNIIRL 84 (304)
T ss_pred eeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC---CCeeEE
Confidence 334568889999999986422 1 47888775421 2335567777766642 234445
Q ss_pred eeecccCCCceEEEEeeecCCCC
Q 020393 110 FKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 110 ~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
+..... .+..+++|||++|.++
T Consensus 85 ~~~~~~-~~~~~lv~e~~~~~~L 106 (304)
T cd05096 85 LGVCVD-EDPLCMITEYMENGDL 106 (304)
T ss_pred EEEEec-CCceEEEEecCCCCcH
Confidence 544332 4678999999998754
No 163
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.51 E-value=0.00038 Score=63.73 Aligned_cols=74 Identities=12% Similarity=0.024 Sum_probs=47.6
Q ss_pred EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++.... ..|++|+.... ....+..|..+++.+..+ -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~ 78 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKH--PFLTQLHSCFQT-KDRLFFVMEYV 78 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence 36778889999997643 37888977531 122344566666665433 245556554332 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 79 ~~~~L 83 (318)
T cd05570 79 NGGDL 83 (318)
T ss_pred CCCCH
Confidence 98754
No 164
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.51 E-value=0.0014 Score=57.64 Aligned_cols=75 Identities=17% Similarity=0.111 Sum_probs=51.2
Q ss_pred EeEeCCccccceEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393 54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 131 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 131 (326)
.+.++.|..+.+|+....+..+++|...... ...+..|..+++.+... .+.+++..... .+..+++||+.+|.+
T Consensus 11 ~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v~e~~~~~~ 86 (256)
T cd05039 11 GATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHP---NLVQLLGVVLQ-GNPLYIVTEYMAKGS 86 (256)
T ss_pred eeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCc---ceeeeEEEEcC-CCCeEEEEEecCCCc
Confidence 4557888889999998877789999987532 23456677777776532 23344433322 468899999999765
Q ss_pred C
Q 020393 132 S 132 (326)
Q Consensus 132 ~ 132 (326)
+
T Consensus 87 L 87 (256)
T cd05039 87 L 87 (256)
T ss_pred H
Confidence 4
No 165
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.51 E-value=0.0014 Score=57.62 Aligned_cols=75 Identities=21% Similarity=0.131 Sum_probs=48.9
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.+.++.|..+.+|++... +..|++|..... ....+..|...++.+... .+++++..... .+..+++|+++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~~ 80 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHP---NIVAFKESFEA-DGHLYIVMEYC 80 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCC---CcceEEEEEEE-CCEEEEEEeeC
Confidence 466888888999998764 347999986431 123355677766666432 34555544332 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 81 ~~~~l 85 (255)
T cd08219 81 DGGDL 85 (255)
T ss_pred CCCcH
Confidence 98653
No 166
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.50 E-value=0.0018 Score=56.12 Aligned_cols=75 Identities=15% Similarity=0.073 Sum_probs=50.8
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
.+.++.|....+|++... +..+++|...... ...+..|.+.++.+.. -.+++++..... ++..++++++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~ 80 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH---PNIVKYYGSYLK-KDELWIVMEFCS 80 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC---CCEeEEEEEEec-CCeEEEEEecCC
Confidence 356778888899999875 3378999886532 2345667776666652 245555554332 468899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|.++
T Consensus 81 ~~~L 84 (253)
T cd05122 81 GGSL 84 (253)
T ss_pred CCcH
Confidence 8654
No 167
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.50 E-value=0.00088 Score=61.33 Aligned_cols=27 Identities=30% Similarity=0.294 Sum_probs=24.2
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||+++.++...|+|+.
T Consensus 115 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg 141 (321)
T cd05603 115 LNIIYRDLKPENILLDSQGHVVLTDFG 141 (321)
T ss_pred CCeEeccCCHHHeEECCCCCEEEccCC
Confidence 479999999999999988888999974
No 168
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=97.50 E-value=0.00088 Score=60.26 Aligned_cols=75 Identities=13% Similarity=0.072 Sum_probs=48.7
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.+.++.|....+|++... +..+++|..... ....+..|.+.++.+.. -.+++++..... .+..+++||
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e 81 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH---PFLVNLYGSFQD-DSNLYLVME 81 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCccceeeEEEc-CCeEEEEEe
Confidence 466788888999998764 347888876531 12335567777766652 234555544332 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|.++
T Consensus 82 ~~~~~~L 88 (290)
T cd05580 82 YVPGGEL 88 (290)
T ss_pred cCCCCCH
Confidence 9988654
No 169
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.50 E-value=0.0012 Score=59.05 Aligned_cols=78 Identities=21% Similarity=0.202 Sum_probs=48.9
Q ss_pred eeEeEeCCccccceEEEEeC------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCce
Q 020393 52 TKICPVGGGCINLASRYGTD------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS 120 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~ 120 (326)
..++.++.|..+.+|+.... +..+++|...... ...+..|..+++.+... .+++.+...... ....
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 7 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE---NIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCC---CeeeeeeEEecCCCCce
Confidence 34566888889999988632 2368889875421 23456777777766431 233343332221 2467
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
+++||+++|.++
T Consensus 84 ~lv~e~~~g~~L 95 (284)
T cd05079 84 KLIMEFLPSGSL 95 (284)
T ss_pred EEEEEccCCCCH
Confidence 999999998765
No 170
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.49 E-value=0.00046 Score=63.59 Aligned_cols=76 Identities=13% Similarity=0.042 Sum_probs=46.5
Q ss_pred eEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
-++.++.|..+.||++.... ..+.+|+.... ....+..|..++..+.. -.++.++..... .+..++||
T Consensus 5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~ 80 (332)
T cd05623 5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN---QWITTLHYAFQD-ENNLYLVM 80 (332)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCEEEEEE
Confidence 35678889999999987643 36888886421 11224455555444322 223444433322 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|+++
T Consensus 81 ey~~~g~L 88 (332)
T cd05623 81 DYYVGGDL 88 (332)
T ss_pred eccCCCcH
Confidence 99998755
No 171
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=97.48 E-value=0.0015 Score=60.97 Aligned_cols=73 Identities=19% Similarity=0.197 Sum_probs=50.4
Q ss_pred eCCccccceEEEEeCCcc-EEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 57 VGGGCINLASRYGTDAGS-FFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~~~-~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
++.|....||+....+.. +.+|+..... ...+..|+.+|..|+.- .|-+++++...+.+...+||||++|+
T Consensus 49 iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~Hp---NIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHP---NIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred cccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCC---CeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 788899999998877666 7778776422 23688899888887541 23335554433122579999999998
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
.+
T Consensus 126 sL 127 (362)
T KOG0192|consen 126 SL 127 (362)
T ss_pred cH
Confidence 65
No 172
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.48 E-value=0.0017 Score=57.87 Aligned_cols=77 Identities=25% Similarity=0.183 Sum_probs=49.4
Q ss_pred eEeEeCCccccceEEEEeC------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceE
Q 020393 53 KICPVGGGCINLASRYGTD------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSY 121 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~ 121 (326)
-++.++.|..+.+|++... ...+++|...... ...+..|...++.+.. -.+++++...... ....+
T Consensus 8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~---~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH---ENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC---CChheEEeeeecCCCCceE
Confidence 3466788888999998753 2368899876532 2346677776666632 1344554433221 34689
Q ss_pred EEEeeecCCCC
Q 020393 122 IIMEFIEFGSS 132 (326)
Q Consensus 122 ~v~e~l~G~~~ 132 (326)
++||+++|.++
T Consensus 85 lv~e~~~~~~l 95 (284)
T cd05038 85 LIMEYLPSGSL 95 (284)
T ss_pred EEEecCCCCCH
Confidence 99999988755
No 173
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.47 E-value=0.0016 Score=56.88 Aligned_cols=73 Identities=19% Similarity=0.164 Sum_probs=49.8
Q ss_pred EeCCccccceEEEEeC-----CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 56 PVGGGCINLASRYGTD-----AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~-----~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.++.|....+|++... ...+++|...... ...+..|.+.++.+. + ..+++++..... .+..+++||+
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~--~~i~~~~~~~~~-~~~~~lv~e~ 77 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-H--PNVVRLLGVCTE-EEPLYLVLEY 77 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-C--CChheeeeeecC-CCceEEEEEe
Confidence 4677888899998875 3478999886532 234567777777775 2 234455544332 5688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
.+|.++
T Consensus 78 ~~~~~L 83 (262)
T cd00192 78 MEGGDL 83 (262)
T ss_pred ccCCcH
Confidence 998765
No 174
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.47 E-value=0.0031 Score=57.02 Aligned_cols=79 Identities=11% Similarity=0.080 Sum_probs=49.7
Q ss_pred ceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
+-.-++.++.|..+.+|+.... +..+.+|...... ...+..|..+++.+.. -.+.+++..... ....+++|
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h---~~v~~~~~~~~~-~~~~~lv~ 96 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVM 96 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC---CCEeeEEEEEEe-CCEEEEee
Confidence 3455667888989999998753 3478888765321 2345567776665532 234444433222 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|..+
T Consensus 97 e~~~~~~L 104 (296)
T cd06654 97 EYLAGGSL 104 (296)
T ss_pred cccCCCCH
Confidence 99998654
No 175
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.47 E-value=0.00076 Score=61.90 Aligned_cols=27 Identities=30% Similarity=0.278 Sum_probs=24.2
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.|||++.++...|+|+.
T Consensus 115 ~givH~Dlkp~NIll~~~~~~kL~DfG 141 (325)
T cd05604 115 INIVYRDLKPENILLDSQGHVVLTDFG 141 (325)
T ss_pred CCeeecCCCHHHeEECCCCCEEEeecC
Confidence 479999999999999988888899974
No 176
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.45 E-value=0.0009 Score=61.24 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=45.1
Q ss_pred EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.||++...+ ..+++|..... .......|..++..+..+ -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~ey~ 78 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--PFLTHLYCTFQT-KENLFFVMEYL 78 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CcCcceEEEEEe-CCEEEEEEeCC
Confidence 46788889999998643 36888976431 112233455555443232 224445544332 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 79 ~~g~L 83 (316)
T cd05619 79 NGGDL 83 (316)
T ss_pred CCCcH
Confidence 98755
No 177
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.45 E-value=0.00037 Score=62.48 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=51.0
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.....++.|....+|++... +..+++|...... ...+..|.+.++.+.. ..+++++..... ++..++++|++
T Consensus 22 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~ 97 (286)
T cd06614 22 KNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH---PNIVDYYDSYLV-GDELWVVMEYM 97 (286)
T ss_pred hHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC---CCeeEEEEEEEE-CCEEEEEEecc
Confidence 33456788888889998775 4578999876432 3345667777766643 234555543322 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 98 ~~~~L 102 (286)
T cd06614 98 DGGSL 102 (286)
T ss_pred CCCcH
Confidence 98655
No 178
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.45 E-value=0.00037 Score=66.60 Aligned_cols=73 Identities=12% Similarity=0.085 Sum_probs=49.6
Q ss_pred eeEeEeCCccccceEEEEeCCc-cEEEEe-cC----CCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 52 TKICPVGGGCINLASRYGTDAG-SFFVKT-NR----SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~-~~----~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.-++.+|-|.++.||+|...+. -|.+|. .- .....-+..|...|..|..+ ..|-++|-+.-. ++.-|+|||
T Consensus 364 eilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~--~~IIqL~DYEv~-d~~lYmvmE 440 (677)
T KOG0596|consen 364 EILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH--DKIIQLYDYEVT-DGYLYMVME 440 (677)
T ss_pred hHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC--ceEEEEeeeecc-CceEEEEee
Confidence 3455578888999999986543 444443 22 11234478899999999875 566667755443 789999999
Q ss_pred ee
Q 020393 126 FI 127 (326)
Q Consensus 126 ~l 127 (326)
+=
T Consensus 441 ~G 442 (677)
T KOG0596|consen 441 CG 442 (677)
T ss_pred cc
Confidence 74
No 179
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.43 E-value=0.00057 Score=61.25 Aligned_cols=72 Identities=11% Similarity=-0.067 Sum_probs=44.3
Q ss_pred eCCccccceEEEEeC-C-ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTD-A-GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|..+.+|++... + ..+++|..... . ...+..|.++++.+... .+.++...... .+..+++||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e~~~ 76 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSR---FIVSLAYAFQT-KTDLCLVMTIMN 76 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCC---cEeeeeEEEcC-CCeEEEEEeCCC
Confidence 467888999998763 3 36888876531 1 12344577777766431 23333332222 467899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|.++
T Consensus 77 ~g~L 80 (280)
T cd05608 77 GGDL 80 (280)
T ss_pred CCCH
Confidence 8765
No 180
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.43 E-value=0.0023 Score=56.57 Aligned_cols=78 Identities=23% Similarity=0.157 Sum_probs=50.0
Q ss_pred eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
..-...++.|....+|+.... +..+++|...... ...+..|.+.++.+.. -.+.+++..... ++..+++|||
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~ 83 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTR-EPPFYIITEF 83 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCC---CChhheEEEEcC-CCCcEEEEEe
Confidence 334456788888899997754 3478889876432 2345567777777643 123334433222 4678999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
.+|.++
T Consensus 84 ~~~~~L 89 (263)
T cd05052 84 MTYGNL 89 (263)
T ss_pred CCCCcH
Confidence 998755
No 181
>PRK10345 hypothetical protein; Provisional
Probab=97.43 E-value=0.0011 Score=57.17 Aligned_cols=75 Identities=16% Similarity=0.175 Sum_probs=47.9
Q ss_pred eeeEeEeCCccccceEEEEeCCccEEEEecCCC---CcchHHHHHHHHHHHHhcC--CCCCcceeeecccCCC--ceE-E
Q 020393 51 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSMFEGEALGLGAMYETR--TIRAPRPFKVGALPTG--GSY-I 122 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~--~~~vP~~~~~~~~~~~--~~~-~ 122 (326)
..+.+.++.|....||. ...++..++|+.... ....+..|...++.|.... --.+++++..-.+..| ..+ +
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 34567889999999996 334555688876532 2345788999999986421 1247777766544322 323 5
Q ss_pred EEee
Q 020393 123 IMEF 126 (326)
Q Consensus 123 v~e~ 126 (326)
|+++
T Consensus 83 I~e~ 86 (210)
T PRK10345 83 IADF 86 (210)
T ss_pred EecC
Confidence 6787
No 182
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.42 E-value=0.0021 Score=56.69 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=49.9
Q ss_pred eeEeEeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 52 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
+-.+.++.|..+.+|.....++ .+.+|...... ...+..|...++.+.. -.+++++..... .+..+++||+++
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 82 (256)
T cd05113 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH---EKLVQLYGVCTK-QRPIYIVTEYMS 82 (256)
T ss_pred EEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCC---CCeeeEEEEEcc-CCCcEEEEEcCC
Confidence 3456788888899999876544 58888765422 2345567776666542 235555554432 456799999998
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|..+
T Consensus 83 ~~~l 86 (256)
T cd05113 83 NGCL 86 (256)
T ss_pred CCcH
Confidence 7654
No 183
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.42 E-value=0.0017 Score=60.03 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=50.7
Q ss_pred eeeEeEeCCccccceEEEEe------CC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 51 ITKICPVGGGCINLASRYGT------DA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~------~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
..-.+.++.|....||+... .+ ..+.+|+..... ...+..|..++..+..+ -.+.+++.......+.
T Consensus 9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~ 86 (343)
T cd05103 9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGGP 86 (343)
T ss_pred hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCC--ccHhhhcceeecCCCc
Confidence 33456688899999999862 12 268888875421 12355688888777543 2345555433222356
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++|||++|.++
T Consensus 87 ~~lv~ey~~~g~L 99 (343)
T cd05103 87 LMVIVEFCKFGNL 99 (343)
T ss_pred eEEEEeccCCCcH
Confidence 7899999999765
No 184
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.41 E-value=0.00094 Score=59.90 Aligned_cols=76 Identities=12% Similarity=0.001 Sum_probs=47.9
Q ss_pred EeEeCCccccceEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 54 ICPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
.+.++.|..+.+|++... + ..+.+|..... ....+..|.+++..+..+ -.++.++..... .+..+
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~--~~i~~~~~~~~~-~~~~~ 81 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRC--PFLVTLHYAFQT-DTKLH 81 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCC--cchhhhheeeec-CCEEE
Confidence 456888889999998742 2 25888876431 123355678777777543 223334333222 45788
Q ss_pred EEEeeecCCCC
Q 020393 122 IIMEFIEFGSS 132 (326)
Q Consensus 122 ~v~e~l~G~~~ 132 (326)
++|||++|.++
T Consensus 82 lv~e~~~~~~L 92 (288)
T cd05583 82 LILDYVNGGEL 92 (288)
T ss_pred EEEecCCCCcH
Confidence 99999998654
No 185
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.41 E-value=0.00067 Score=62.34 Aligned_cols=27 Identities=26% Similarity=0.193 Sum_probs=24.1
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.|||++.++...|+|+.
T Consensus 115 ~~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (330)
T cd05586 115 YDIVYRDLKPENILLDATGHIALCDFG 141 (330)
T ss_pred CCeEeccCCHHHeEECCCCCEEEecCC
Confidence 379999999999999988888899974
No 186
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.41 E-value=0.0023 Score=55.86 Aligned_cols=75 Identities=15% Similarity=0.084 Sum_probs=48.3
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++.++.|....+|++... +..+++|..... ....+..|.++++.+.. ..+.+++..... .+..++++|+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~~~~~~~~-~~~~~lv~e~ 80 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH---PNIIKYYESFEE-KGKLCIVMEY 80 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC---CChhheEEEEec-CCEEEEEEEe
Confidence 455777888899999875 447899987542 12335567776666652 123444433222 4688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 81 ~~~~~L 86 (258)
T cd08215 81 ADGGDL 86 (258)
T ss_pred cCCCcH
Confidence 998754
No 187
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.41 E-value=0.0011 Score=60.76 Aligned_cols=27 Identities=30% Similarity=0.294 Sum_probs=24.1
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.|||++.++...|+|+.
T Consensus 115 ~givH~dikp~NIll~~~~~~kl~Dfg 141 (323)
T cd05575 115 LNIIYRDLKPENILLDSQGHVVLTDFG 141 (323)
T ss_pred CCeEeCCCCHHHeEECCCCcEEEeccC
Confidence 369999999999999988888899974
No 188
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.40 E-value=0.0018 Score=56.76 Aligned_cols=74 Identities=18% Similarity=0.106 Sum_probs=46.3
Q ss_pred eEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 55 CPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
..++.|....+|+++.. +..+++|..... ....+..|.+.++.+.. -.+.+++..... .+..+++|||.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS---SYIIRYYESFLD-KGKLNIVMEYA 81 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC---CCeehheeeecc-CCEEEEEEEeC
Confidence 45777888899999764 337888876431 12334456666665542 223444433322 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 82 ~~~~L 86 (256)
T cd08529 82 ENGDL 86 (256)
T ss_pred CCCcH
Confidence 98754
No 189
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.39 E-value=0.0036 Score=54.86 Aligned_cols=76 Identities=21% Similarity=0.111 Sum_probs=44.7
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++.++.|....+|++.... ..+++|...... ...+..|.+.++.+.. ..+.+++......++..+++||+
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKH---PNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCC---CCeeeeeeeecCCCCEEEEEecc
Confidence 3456778888999987643 368888764321 1234556666655532 12333332221113467899999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 82 ~~~~~l 87 (257)
T cd08223 82 CEGGDL 87 (257)
T ss_pred cCCCcH
Confidence 998654
No 190
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.38 E-value=0.0012 Score=62.01 Aligned_cols=80 Identities=13% Similarity=0.063 Sum_probs=52.6
Q ss_pred eeeEeEeCCccccceEEEEe---CC----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 51 ITKICPVGGGCINLASRYGT---DA----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~---~~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
..-.+.++.|..+.||++.. .+ ..+.+|...... ...+..|.++++.+..+ -.+++++..... .+.
T Consensus 40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h--~nIv~~~~~~~~-~~~ 116 (374)
T cd05106 40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH--KNIVNLLGACTH-GGP 116 (374)
T ss_pred ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccC--CceeeEeeEecC-CCC
Confidence 33456688888999998763 11 158888775321 23456788888877443 235566654432 468
Q ss_pred eEEEEeeecCCCCC
Q 020393 120 SYIIMEFIEFGSSR 133 (326)
Q Consensus 120 ~~~v~e~l~G~~~~ 133 (326)
.+++|||++|+++.
T Consensus 117 ~~lv~ey~~~g~L~ 130 (374)
T cd05106 117 VLVITEYCCYGDLL 130 (374)
T ss_pred eEEeHhhccCCcHH
Confidence 89999999998763
No 191
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.38 E-value=0.005 Score=55.62 Aligned_cols=79 Identities=13% Similarity=0.105 Sum_probs=50.5
Q ss_pred ceeeEeEeCCccccceEEEEe--CCccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 50 HITKICPVGGGCINLASRYGT--DAGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.-.-++.++.|..+.+|+... ++..+++|...... ...+..|...++.+... .+++++..... ....++++
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~ 95 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNP---NIVNFLDSFLV-GDELFVVM 95 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCC---ceeeeeeeEec-CceEEEEE
Confidence 345567788888899999864 23478888765321 23455677777666432 23444433222 46789999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|..+
T Consensus 96 e~~~~~~L 103 (296)
T cd06655 96 EYLAGGSL 103 (296)
T ss_pred EecCCCcH
Confidence 99998754
No 192
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=97.38 E-value=0.0015 Score=61.44 Aligned_cols=185 Identities=16% Similarity=0.118 Sum_probs=104.2
Q ss_pred eCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeee---cccC---CCceEEEEeeecCC
Q 020393 57 VGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKV---GALP---TGGSYIIMEFIEFG 130 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~---~~~~---~~~~~~v~e~l~G~ 130 (326)
++.|-...||+-...+..+-||+++..+.+.+..|.++.+.. +...+.++.+ +... ....|+|+++=+-+
T Consensus 218 i~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp----~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kG 293 (534)
T KOG3653|consen 218 IGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLP----GMKHENILQFIGAEKRGTADRMEYWLVTEFHPKG 293 (534)
T ss_pred hhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhcc----CccchhHHHhhchhccCCccccceeEEeeeccCC
Confidence 467888999998888888999999876667788888877644 2233444332 2111 23678888887654
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHH
Q 020393 131 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 210 (326)
Q Consensus 131 ~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 210 (326)
++. +.| +-|. -+|.+.- ++..-+.. =+.-|-
T Consensus 294 sL~-------dyL-~~nt--------------------------isw~~~c---ria~Smar------------GLa~LH 324 (534)
T KOG3653|consen 294 SLC-------DYL-KANT--------------------------ISWNSLC---RIAESMAR------------GLAHLH 324 (534)
T ss_pred cHH-------HHH-Hhcc--------------------------ccHHHHH---HHHHHHHH------------HHHHhc
Confidence 331 111 1111 1232211 12111100 001111
Q ss_pred HHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cc---cCchhhhhhh-hh-hcCCChHhHHHhhhhCCCCc
Q 020393 211 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY---YGHNEAEFGM-SW-CAGFGGSFYNSYFEVMPKQP 284 (326)
Q Consensus 211 ~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~---~G~~~~Dla~-~~-~~~~~~~fl~~Y~~~~~l~~ 284 (326)
+.++ ..+ ..+|.++|.||+..|||+..|....|-||. +. .|-+.-|.+. +- ..-+.++.+++=-.... +
T Consensus 325 ee~p--~~d-~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d--~ 399 (534)
T KOG3653|consen 325 EELP--RGD-HHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQD--R 399 (534)
T ss_pred ccCC--cCC-CCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhccccc--H
Confidence 1122 111 468999999999999999888767888874 32 4555555542 11 11244677776543322 4
Q ss_pred CHHHHHHHHHHHHHH
Q 020393 285 GFEKRRDLYMLYHYL 299 (326)
Q Consensus 285 ~~~~r~~~y~l~~~l 299 (326)
+--.|+++|.+...+
T Consensus 400 ~Afkr~DvYamgLVL 414 (534)
T KOG3653|consen 400 DAFKRIDVYAMGLVL 414 (534)
T ss_pred HHHHHHHHHHHHHHH
Confidence 445789999865433
No 193
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.37 E-value=0.0021 Score=56.66 Aligned_cols=75 Identities=11% Similarity=-0.032 Sum_probs=48.1
Q ss_pred EeEeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.+.++.|..+.+|++... + ..+++|..... ....+..|.++++.+.. ..+++++..... .+..+++||
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 82 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH---PNVIKYLASFIE-NNELNIVLE 82 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC---CCeeeeeeeeec-CCeEEEEEe
Confidence 345788888999998875 3 36888866421 12345667777776643 234444443322 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 83 ~~~~~~L 89 (267)
T cd08224 83 LADAGDL 89 (267)
T ss_pred cCCCCCH
Confidence 9998755
No 194
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.37 E-value=0.001 Score=59.23 Aligned_cols=78 Identities=18% Similarity=0.100 Sum_probs=49.0
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
++.++.|..+.+|+.... +..+++|..... ....+..|..+++.+.....-.+.+++..... .+..+++||++
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv~e~~ 84 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWIIMEYA 84 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEEEecC
Confidence 355778888999998753 347888986532 12345678878877763211223334433221 45789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 85 ~~~~L 89 (277)
T cd06917 85 EGGSV 89 (277)
T ss_pred CCCcH
Confidence 98754
No 195
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.36 E-value=0.001 Score=58.77 Aligned_cols=75 Identities=12% Similarity=-0.014 Sum_probs=47.2
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.+.++.|..+.+|+.... +..+++|..... . ...+..|.+.++.+.. -.+++++..... .+..++++|
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e 82 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH---PNVIKYLDSFIE-DNELNIVLE 82 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC---cceeeeeeeEEE-CCeEEEEEE
Confidence 345788888999998763 347888865421 1 1234567777766643 224444443322 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+.+|.++
T Consensus 83 ~~~~~~L 89 (267)
T cd08228 83 LADAGDL 89 (267)
T ss_pred ecCCCcH
Confidence 9998654
No 196
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.36 E-value=0.0028 Score=56.45 Aligned_cols=76 Identities=16% Similarity=0.074 Sum_probs=46.5
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.++.++.|..+.+|+.... +..+++|...... ...+..|...++.+.. -.+.+++..... .+..+++|||
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~ 83 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-DTKLWIIMEY 83 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC---CCEeEEEEEEEe-CCeEEEEEEe
Confidence 3455788888999998653 3378889875321 1234456665555532 123344433222 4678999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|..+
T Consensus 84 ~~~~~l 89 (277)
T cd06641 84 LGGGSA 89 (277)
T ss_pred CCCCcH
Confidence 998654
No 197
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.36 E-value=0.0016 Score=58.45 Aligned_cols=79 Identities=18% Similarity=0.127 Sum_probs=50.9
Q ss_pred eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEEE
Q 020393 52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYII 123 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v 123 (326)
.-++.++.|..+.+|++... ++ .+++|..... ....+..|...++.+.++ -.+++++...... .+..+++
T Consensus 25 ~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~~~~lv 102 (291)
T cd06639 25 EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH--PNVVKFYGMFYKADKLVGGQLWLV 102 (291)
T ss_pred EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCC--CCeEEEEEEEEeccccCCCeeEEE
Confidence 34456788888999998864 33 6888887542 123456677777777543 2355555432211 2468999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|.++
T Consensus 103 ~ey~~~~sL 111 (291)
T cd06639 103 LELCNGGSV 111 (291)
T ss_pred EEECCCCcH
Confidence 999998764
No 198
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.35 E-value=0.0017 Score=58.91 Aligned_cols=75 Identities=15% Similarity=-0.006 Sum_probs=47.9
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.+|+..... ..+++|...... ...+..|..+++.+.. -.+++++..... .+..+++||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN---PFVVSMFCSFET-KRHLCMVME 81 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC---CCeeeeEEEEec-CCEEEEEEe
Confidence 4667888889999987643 378888765321 1234466666665532 235555544332 457799999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|.++
T Consensus 82 ~~~g~~L 88 (305)
T cd05609 82 YVEGGDC 88 (305)
T ss_pred cCCCCcH
Confidence 9998654
No 199
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.35 E-value=0.0034 Score=55.82 Aligned_cols=78 Identities=17% Similarity=0.099 Sum_probs=47.8
Q ss_pred ceeeEeEeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
++.....++.|..+.+|.+... +..|++|......... .|......+.++ -.+++++..... .+..+++|||+
T Consensus 17 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~e~~~~~~~~~h--~~iv~~~~~~~~-~~~~~iv~e~~ 91 (267)
T PHA03390 17 EIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--IEPMVHQLMKDN--PNFIKLYYSVTT-LKGHVLIMDYI 91 (267)
T ss_pred ccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--hhHHHHHHhhcC--CCEEEEEEEEec-CCeeEEEEEcC
Confidence 4444444899999999998863 3378889876432121 233333333332 345556654433 46899999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 92 ~~~~L 96 (267)
T PHA03390 92 KDGDL 96 (267)
T ss_pred CCCcH
Confidence 98654
No 200
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.35 E-value=0.0016 Score=58.13 Aligned_cols=76 Identities=14% Similarity=-0.129 Sum_probs=47.5
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
-++.++.|..+.+|+.... ...+++|..... . ...+..|..++..+.. -.+.+++..... .+..+++||+
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~ 80 (279)
T cd06619 5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS---PYIIGFYGAFFV-ENRISICTEF 80 (279)
T ss_pred heeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC---CCeeeEEEEEEE-CCEEEEEEec
Confidence 3466888888999998753 347888887532 1 1234456666655532 234444443322 4678999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|..+
T Consensus 81 ~~~~~l 86 (279)
T cd06619 81 MDGGSL 86 (279)
T ss_pred CCCCCh
Confidence 998754
No 201
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.35 E-value=0.002 Score=58.22 Aligned_cols=74 Identities=12% Similarity=0.075 Sum_probs=48.8
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.-++.++.|..+.+|+.... +..+++|..... ....+..|...++.+.. -.+.+++..... ++..+++||
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~nI~~~~~~~~~-~~~~~lv~e 84 (301)
T cd07873 9 IKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIIHT-EKSLTLVFE 84 (301)
T ss_pred EEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC---CCcceEEEEEec-CCeEEEEEe
Confidence 45677888999999998764 346888876531 12335568877777743 234555554332 467899999
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
|++|
T Consensus 85 ~~~~ 88 (301)
T cd07873 85 YLDK 88 (301)
T ss_pred cccc
Confidence 9875
No 202
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=97.34 E-value=0.0019 Score=57.72 Aligned_cols=78 Identities=24% Similarity=0.225 Sum_probs=48.0
Q ss_pred eeEeEeCCccccceEEEEe------CCccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCce
Q 020393 52 TKICPVGGGCINLASRYGT------DAGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS 120 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~------~~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~ 120 (326)
..++.++.|..+.+|++.. .+..+++|..... ....+..|.++++.+.. -.+++++...... ....
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYH---ENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEecCCCceE
Confidence 3456678888888987642 1236888987642 12345567777777643 1344555432221 2467
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
+++||+++|.++
T Consensus 84 ~lv~e~~~~~~l 95 (283)
T cd05080 84 QLIMEYVPLGSL 95 (283)
T ss_pred EEEecCCCCCCH
Confidence 899999988754
No 203
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.34 E-value=0.0036 Score=54.90 Aligned_cols=78 Identities=19% Similarity=0.137 Sum_probs=52.0
Q ss_pred eeeEeEeCCccccceEEEEeC-CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 51 ITKICPVGGGCINLASRYGTD-AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.+-.+.++.|..+.+|+.... +..+.+|..... ....+..|.+.++.+.. ..+.+++..... .+..+++|+++
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~~ 81 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSH---PKLVQLYGVCTE-RSPICLVFEFM 81 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCC---CCeeeEEEEEcc-CCceEEEEEcC
Confidence 444567888888999998765 447888887542 23456678888877743 124444444322 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 82 ~~~~L 86 (256)
T cd05112 82 EHGCL 86 (256)
T ss_pred CCCcH
Confidence 98754
No 204
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.34 E-value=0.0019 Score=58.80 Aligned_cols=77 Identities=17% Similarity=0.014 Sum_probs=49.7
Q ss_pred eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.-.+.++.|....+|++... ++ .+++|...... ...+..|.++++.+.. -.+.+++..... ++..+++||
T Consensus 4 ~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e 79 (308)
T cd06615 4 EKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNS---PYIVGFYGAFYS-DGEISICME 79 (308)
T ss_pred eEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEee-CCEEEEEee
Confidence 34566888888999998764 23 56777764321 1235567777777743 234455543322 578899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 80 y~~~~~L 86 (308)
T cd06615 80 HMDGGSL 86 (308)
T ss_pred ccCCCcH
Confidence 9998765
No 205
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.33 E-value=0.0019 Score=57.85 Aligned_cols=76 Identities=16% Similarity=0.106 Sum_probs=45.4
Q ss_pred EeEeCCccccceEEEEeC--Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecc---c-CCCceE
Q 020393 54 ICPVGGGCINLASRYGTD--AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA---L-PTGGSY 121 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~-~~~~~~ 121 (326)
++.++.|..+.||++... ++ .+++|..... .......|...++.+....--.+++++.... . ..+..+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 456888999999998752 33 4677865421 1123456777777775321123445544321 1 135689
Q ss_pred EEEeeecC
Q 020393 122 IIMEFIEF 129 (326)
Q Consensus 122 ~v~e~l~G 129 (326)
++||+++|
T Consensus 86 lv~e~~~~ 93 (290)
T cd07862 86 LVFEHVDQ 93 (290)
T ss_pred EEEccCCC
Confidence 99999875
No 206
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.33 E-value=0.0015 Score=58.38 Aligned_cols=72 Identities=13% Similarity=-0.016 Sum_probs=43.7
Q ss_pred eCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|..+.||++... +..|.+|..... .......|.++++.+.. -.+.+++..... +...+++||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~~ 76 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS---PFIVNLAYAFES-KTHLCLVMSLMN 76 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC---CcEEEEEEEEec-CCeEEEEEecCC
Confidence 456788899998764 336888876421 11223457777776642 123333333222 467899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|.++
T Consensus 77 g~~L 80 (277)
T cd05607 77 GGDL 80 (277)
T ss_pred CCCH
Confidence 8755
No 207
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.33 E-value=0.0025 Score=56.87 Aligned_cols=76 Identities=16% Similarity=0.068 Sum_probs=49.3
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.++.++.|..+.+|+.... +..+++|...... ...+..|...++.+.. -.+++++..... .+..+++|||
T Consensus 8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~ 83 (277)
T cd06640 8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-GTKLWIIMEY 83 (277)
T ss_pred hhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCEEEEEEec
Confidence 4456788888899998753 3478888875321 1234556666665532 235555554433 4688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 84 ~~~~~L 89 (277)
T cd06640 84 LGGGSA 89 (277)
T ss_pred CCCCcH
Confidence 999765
No 208
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.33 E-value=0.0019 Score=56.64 Aligned_cols=75 Identities=16% Similarity=0.101 Sum_probs=45.6
Q ss_pred eEeCCccccceEEEEeC-C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEee
Q 020393 55 CPVGGGCINLASRYGTD-A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF 126 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~ 126 (326)
..++.|....+|++... + ..+++|...... ...+..|...++.+... .+.+++...... ....+++|||
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~e~ 82 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHP---NIVRYYDRIIDRSNQTLYIVMEY 82 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCC---ccceeeeeeecCCCCEEEEEehh
Confidence 45777888899998753 2 368888764321 22344566666666432 244444322221 3467999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 83 ~~~~~L 88 (265)
T cd08217 83 CEGGDL 88 (265)
T ss_pred ccCCCH
Confidence 998755
No 209
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.32 E-value=0.0017 Score=57.00 Aligned_cols=71 Identities=11% Similarity=0.033 Sum_probs=44.2
Q ss_pred CCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 58 GGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 58 ~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
+.|..+.+|++... +..+++|...... ...+..|.+.++.+.. ..+++++..... ....+++||+++|
T Consensus 2 g~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e~~~~ 77 (265)
T cd05579 2 SKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS---PYVVKLYYSFQG-KKNLYLVMEYLPG 77 (265)
T ss_pred CCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC---cchhHHHHheec-CcEEEEEEecCCC
Confidence 56777899999875 3479999876421 1234556666655542 223444433222 4678999999998
Q ss_pred CCC
Q 020393 130 GSS 132 (326)
Q Consensus 130 ~~~ 132 (326)
.++
T Consensus 78 ~~L 80 (265)
T cd05579 78 GDL 80 (265)
T ss_pred CcH
Confidence 655
No 210
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.32 E-value=0.0026 Score=57.14 Aligned_cols=76 Identities=13% Similarity=0.067 Sum_probs=48.7
Q ss_pred eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
..+.++.|..+.+|+.... ++ .+.+|..... ....+..|.++++.+... .++.+...... ++..+++|
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~ 79 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQ---FVVNLAYAYET-KDALCLVL 79 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCc---CceeEEEEEec-CCEEEEEE
Confidence 4566888889999998764 33 6888876431 112345688888877542 23333333222 46789999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
|+++|..+
T Consensus 80 e~~~~~~L 87 (285)
T cd05632 80 TIMNGGDL 87 (285)
T ss_pred EeccCccH
Confidence 99998654
No 211
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.32 E-value=0.0063 Score=53.41 Aligned_cols=77 Identities=16% Similarity=0.034 Sum_probs=50.0
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.-.+.++.|....+|++... +..+++|...... ...+..|..+++.+.. ..+.+++..... .+..+++||+
T Consensus 6 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~l~~e~ 81 (262)
T cd06613 6 ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH---PNIVAYFGSYLR-RDKLWIVMEY 81 (262)
T ss_pred EEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC---CChhceEEEEEe-CCEEEEEEeC
Confidence 34567888888999998763 3468889876432 2345667776666643 223444443222 4678999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|..+
T Consensus 82 ~~~~~l 87 (262)
T cd06613 82 CGGGSL 87 (262)
T ss_pred CCCCcH
Confidence 998765
No 212
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.32 E-value=0.002 Score=57.43 Aligned_cols=73 Identities=15% Similarity=0.111 Sum_probs=47.6
Q ss_pred eEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
..++.|..+.+|+.... +..+++|...... ...+..|..+++.+.. -.+++++..... ....+++||++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~ 81 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH---PYVVKLLDVFPH-GSGFVLVMEYM 81 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC---CCCcceeeEEec-CCeeEEEeccc
Confidence 45788888999998763 3378889875321 2345677777776642 234455543322 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
|.++
T Consensus 82 -~~~L 85 (286)
T cd07832 82 -PSDL 85 (286)
T ss_pred -CCCH
Confidence 7554
No 213
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.32 E-value=0.0026 Score=56.39 Aligned_cols=73 Identities=15% Similarity=0.145 Sum_probs=44.2
Q ss_pred EeCCccccceEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.+|+.+...+ .+++|...... ...+..|...++.+.. -.+.+++..... .+..+++||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~nii~~~~~~~~-~~~~~lv~e~~ 77 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH---PNVLQCLGQCIE-SIPYLLVLEFC 77 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC---CCcceEEEEECC-CCceEEEEEeC
Confidence 467888899998754322 57888654321 1234456666655532 234445543322 46789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 78 ~~g~L 82 (269)
T cd05042 78 PLGDL 82 (269)
T ss_pred CCCcH
Confidence 98754
No 214
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.32 E-value=0.0055 Score=54.98 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=49.4
Q ss_pred eeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 51 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
..-.+.++.|....+|+....+ ..+++|...... ...+..|..+++.+.++ -.+-+++..... .+.
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~ 90 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGVCTQ-EGP 90 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCC--CCeeeEEEEEcC-CCC
Confidence 3445678888889999987531 257888876421 12245677777766433 123334433222 467
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++|||++|.++
T Consensus 91 ~~li~e~~~~~~L 103 (293)
T cd05053 91 LYVVVEYAAHGNL 103 (293)
T ss_pred eEEEEEeCCCCcH
Confidence 8999999998765
No 215
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=97.32 E-value=0.0014 Score=58.77 Aligned_cols=75 Identities=11% Similarity=0.016 Sum_probs=42.2
Q ss_pred eCCccccceEEEEeCC-c-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTDA-G-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|..+.+|++...+ + .+.+|...... ......|...++.+.....-.++.++..... ++..+++|||++
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 80 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-PDKLCFILDLMN 80 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-CCeEEEEEecCC
Confidence 5678889999987643 3 68888765321 1122334444444432111123333332222 467899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|..+
T Consensus 81 ~~~L 84 (279)
T cd05633 81 GGDL 84 (279)
T ss_pred CCCH
Confidence 8765
No 216
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.31 E-value=0.0026 Score=57.14 Aligned_cols=76 Identities=11% Similarity=0.020 Sum_probs=48.2
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.++.++.|..+.||++... +..+++|..... ....+..|..+++.+... .+..++..... .+..+++|
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~iv~~~~~~~~-~~~~~lv~ 79 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSR---FVVSLAYAYET-KDALCLVL 79 (285)
T ss_pred EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCC---cEEEEEEEEcc-CCeEEEEE
Confidence 4567888999999998763 347888876431 112345677777766432 22333332222 46789999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
|+++|.++
T Consensus 80 e~~~~g~L 87 (285)
T cd05631 80 TIMNGGDL 87 (285)
T ss_pred EecCCCcH
Confidence 99998765
No 217
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.31 E-value=0.0019 Score=57.22 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=46.5
Q ss_pred EeCCccccceEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.+|+....++ .+++|...... ...+..|...++.+.. ..+++++..... ....+++|||+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~ 77 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH---SNLLQCLGQCTE-VTPYLLVMEFC 77 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcC-CCCcEEEEECC
Confidence 467888889999875432 57888765421 1234557776666643 235555554332 45779999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|+++
T Consensus 78 ~~g~L 82 (269)
T cd05087 78 PLGDL 82 (269)
T ss_pred CCCcH
Confidence 98654
No 218
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=97.30 E-value=0.0024 Score=59.16 Aligned_cols=72 Identities=18% Similarity=0.294 Sum_probs=43.3
Q ss_pred eEeCCccccceEEE-EeCCc-cEEEEecCCC-----C-----cchHHHHHHHHHHHHhcCCCCCcceeeeccc-C-CCce
Q 020393 55 CPVGGGCINLASRY-GTDAG-SFFVKTNRSI-----G-----PSMFEGEALGLGAMYETRTIRAPRPFKVGAL-P-TGGS 120 (326)
Q Consensus 55 ~~l~~G~~n~~y~v-~~~~~-~~vlK~~~~~-----~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-~-~~~~ 120 (326)
+.+|.|....|=.. +..++ .|-+|+-... . ....+.|.++|+.|. -|.++...+. . +...
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~------HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS------HPNIVRIKDFFEVPDSS 251 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC------CCCEEEEeeeeecCCce
Confidence 44666666554443 33344 6777876431 1 112458888888774 4666654322 1 3567
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
|+||||++|+.+
T Consensus 252 YmVlE~v~GGeL 263 (475)
T KOG0615|consen 252 YMVLEYVEGGEL 263 (475)
T ss_pred EEEEEEecCccH
Confidence 999999999765
No 219
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.30 E-value=0.0022 Score=57.36 Aligned_cols=73 Identities=14% Similarity=0.116 Sum_probs=46.2
Q ss_pred EeEeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++.++.|..+.+|++.... + .+.+|..... ....+..|..+++.+... .+.+++..... ++..+++|||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~ 81 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE---NIVELKEAFRR-RGKLYLVFEY 81 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCc---cccchhhhEec-CCEEEEEEec
Confidence 4567888889999998743 3 6888876431 123456788777776532 12223322111 4688999999
Q ss_pred ecCC
Q 020393 127 IEFG 130 (326)
Q Consensus 127 l~G~ 130 (326)
++|.
T Consensus 82 ~~~~ 85 (287)
T cd07848 82 VEKN 85 (287)
T ss_pred CCCC
Confidence 9874
No 220
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.29 E-value=0.0013 Score=58.19 Aligned_cols=74 Identities=19% Similarity=0.060 Sum_probs=48.1
Q ss_pred eEeCCccccceEEEEeCCc-cEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
+.++.|..+.+|+....++ .+++|...... ...+..|.+.++.+.. ..+++++..... .+..+++|
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~ 81 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH---VNIVQYLGTCLD-DNTISIFM 81 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC---CCEeeEeeEeec-CCeEEEEE
Confidence 4577888899999876555 57888654211 1235567777666642 234555544332 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|.++
T Consensus 82 e~~~~~~L 89 (265)
T cd06631 82 EFVPGGSI 89 (265)
T ss_pred ecCCCCcH
Confidence 99998754
No 221
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.29 E-value=0.0025 Score=56.06 Aligned_cols=75 Identities=17% Similarity=0.002 Sum_probs=47.0
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
.+.++.|....+|+.... +..+++|..+... ...+..|.++++.+.. -.+.+++..... .+..+++
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v 82 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH---ERIVQYYGCLRD-DETLSIF 82 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC---CCeeeeEEEEcc-CCeEEEE
Confidence 355778888899998653 3478888765311 1234567666666542 124445444332 4688999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
+|+++|..+
T Consensus 83 ~e~~~~~~l 91 (263)
T cd06625 83 MEYMPGGSV 91 (263)
T ss_pred EEECCCCcH
Confidence 999998754
No 222
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.29 E-value=0.0039 Score=55.94 Aligned_cols=79 Identities=13% Similarity=0.149 Sum_probs=50.3
Q ss_pred ceeeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.......++.|..+.+|+.... +..+++|..... ....+..|...++.+.. -.+.+++..... .+..++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h---~~vv~~~~~~~~-~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH---PNIVEMYSSYLV-GDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC---CChheEEEEEEc-CCeEEEEE
Confidence 4567788999999999998753 236888876422 12234456666665532 234444443222 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
++++|..+
T Consensus 96 e~~~~~~L 103 (285)
T cd06648 96 EFLEGGAL 103 (285)
T ss_pred eccCCCCH
Confidence 99998754
No 223
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.28 E-value=0.0023 Score=56.61 Aligned_cols=27 Identities=26% Similarity=0.300 Sum_probs=24.1
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||+++.++...++|+.
T Consensus 133 ~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 133 KRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CceeecCCCHHHEEECCCCcEEEeccc
Confidence 479999999999999988888999974
No 224
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.28 E-value=0.0018 Score=57.11 Aligned_cols=72 Identities=14% Similarity=0.050 Sum_probs=45.4
Q ss_pred eCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|..+.+|++... +..+++|..... ....+..|...++.+.. -.+++++..... +...++++||.+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 76 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH---PFIVKLYRTFKD-KKYIYMLMEYCL 76 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC---CCEeeeeeeEEc-CCccEEEEecCC
Confidence 356777889998875 447899987531 12345667776666642 234444443222 457899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|.++
T Consensus 77 ~~~L 80 (262)
T cd05572 77 GGEL 80 (262)
T ss_pred CCcH
Confidence 8654
No 225
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.28 E-value=0.0033 Score=55.26 Aligned_cols=74 Identities=22% Similarity=0.166 Sum_probs=47.8
Q ss_pred eEeCCccccceEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
+.++.|..+.+|++...++ .+.+|...... ...+..|...++.+.. -.+.+++..... ....+++||+.+|.
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~~ 87 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRH---KHLISLFAVCSV-GEPVYIITELMEKG 87 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCC---cchhheeeeEec-CCCeEEEEeecccC
Confidence 4467788889999876554 67778775432 2445667766666642 234444444332 45789999999987
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
++
T Consensus 88 ~L 89 (261)
T cd05148 88 SL 89 (261)
T ss_pred CH
Confidence 55
No 226
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.28 E-value=0.0035 Score=59.50 Aligned_cols=81 Identities=14% Similarity=0.080 Sum_probs=53.9
Q ss_pred ceeeEeEeCCccccceEEEEeC---C----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393 50 HITKICPVGGGCINLASRYGTD---A----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 118 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~---~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 118 (326)
..+=.+.++.|..+.||+.+.. . ..+.+|...... ...+..|.+++..+..+ -.+++++..... .+
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~H--pnIv~l~~~~~~-~~ 114 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPH--LNIVNLLGACTK-SG 114 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCC--CCeeeEEEEEcc-CC
Confidence 4444567888889999987631 1 147888775421 23456788888877543 235666655433 56
Q ss_pred ceEEEEeeecCCCCC
Q 020393 119 GSYIIMEFIEFGSSR 133 (326)
Q Consensus 119 ~~~~v~e~l~G~~~~ 133 (326)
..+++|||++|+++.
T Consensus 115 ~~~lv~Ey~~~g~L~ 129 (400)
T cd05105 115 PIYIITEYCFYGDLV 129 (400)
T ss_pred ceEEEEEecCCCcHH
Confidence 889999999998763
No 227
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.27 E-value=0.0038 Score=55.19 Aligned_cols=78 Identities=19% Similarity=0.063 Sum_probs=48.8
Q ss_pred eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
..-++.++.|..+.+|+.... ++ .+++|..... ....+..|...++.+.. -.+++++..... .+..+++||
T Consensus 11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h---~~ii~~~~~~~~-~~~~~iv~e 86 (267)
T cd06646 11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH---CNIVAYFGSYLS-REKLWICME 86 (267)
T ss_pred cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCC---CCeeeeeEEEEe-CCEEEEEEe
Confidence 334566788888999998753 33 6788887542 12345567766665532 123444433322 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 87 ~~~~~~L 93 (267)
T cd06646 87 YCGGGSL 93 (267)
T ss_pred CCCCCcH
Confidence 9998654
No 228
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.27 E-value=0.004 Score=55.66 Aligned_cols=76 Identities=16% Similarity=0.102 Sum_probs=45.9
Q ss_pred EeEeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEE
Q 020393 54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~ 122 (326)
++.++.|..+.+|+....+ + .+++|..... .......|.+.++.|....--.+.+++...... ....++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 4567888899999997643 3 6788876531 112345688888877642112244444332211 245789
Q ss_pred EEeeecC
Q 020393 123 IMEFIEF 129 (326)
Q Consensus 123 v~e~l~G 129 (326)
+||+++|
T Consensus 85 v~e~~~~ 91 (288)
T cd07863 85 VFEHVDQ 91 (288)
T ss_pred EEccccc
Confidence 9999875
No 229
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.26 E-value=0.0023 Score=57.44 Aligned_cols=79 Identities=16% Similarity=0.040 Sum_probs=50.7
Q ss_pred eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393 51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII 123 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v 123 (326)
...++.++.|....+|++... +..+++|...... ...+..|.+.++.+... .+..++...... .+..+++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSP---YIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCC---CeeeeeeEEEccCCCeEEEE
Confidence 456778898999999999874 3478888876421 23356677777766431 233343322111 3568999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|.++
T Consensus 80 ~e~~~~~~L 88 (287)
T cd06621 80 MEYCEGGSL 88 (287)
T ss_pred EEecCCCCH
Confidence 999998755
No 230
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.26 E-value=0.00063 Score=61.96 Aligned_cols=137 Identities=20% Similarity=0.246 Sum_probs=79.8
Q ss_pred ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeec-cc-CCC-ce
Q 020393 50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVG-AL-PTG-GS 120 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~-~~-~~~-~~ 120 (326)
++..+..+|.|....||++... .+ -|.+|.-... + ..++..|.++++.. ..|-++... .. .++ ..
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~------~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC------QSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC------CCCCeeeEeEEEEeCCceE
Confidence 4556667889999999999764 34 4666765321 1 23455666555433 345454432 11 145 48
Q ss_pred EEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCCh
Q 020393 121 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 200 (326)
Q Consensus 121 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~ 200 (326)
.++|||.+|+++. .++..... .+ +-. +.
T Consensus 154 sI~mEYMDgGSLd-----------~~~k~~g~--------------i~----------E~~----L~------------- 181 (364)
T KOG0581|consen 154 SICMEYMDGGSLD-----------DILKRVGR--------------IP----------EPV----LG------------- 181 (364)
T ss_pred EeehhhcCCCCHH-----------HHHhhcCC--------------CC----------HHH----HH-------------
Confidence 9999999998652 22221110 00 001 11
Q ss_pred HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcccc
Q 020393 201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC 251 (326)
Q Consensus 201 ~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~ 251 (326)
....++++.+.. +. ....+||+|++|.|+|+...|++-|-||.+
T Consensus 182 ---~ia~~VL~GL~Y-Lh---~~~~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 182 ---KIARAVLRGLSY-LH---EERKIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred ---HHHHHHHHHHHH-Hh---hccCeeeccCCHHHeeeccCCCEEeccccc
Confidence 111223333332 21 247899999999999999888899999853
No 231
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.26 E-value=0.0034 Score=55.23 Aligned_cols=75 Identities=11% Similarity=0.061 Sum_probs=48.7
Q ss_pred EeEeCCccccceEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.+.++.|..+.+|++... + ..+++|..... ....+..|...++.+.. ..+++++..... +...+++|+++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~iv~e~~ 81 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH---PNVVKYYTSFVV-GDELWLVMPYL 81 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC---CCEEEEEEEEee-CCEEEEEEecc
Confidence 455778888999998763 2 37888887532 12345677777766642 234444443222 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 82 ~~~~l 86 (267)
T cd06610 82 SGGSL 86 (267)
T ss_pred CCCcH
Confidence 98754
No 232
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.26 E-value=0.0033 Score=55.31 Aligned_cols=75 Identities=19% Similarity=0.111 Sum_probs=49.6
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.+.++.|..+.+|+.... +..+++|...... ...+..|...++.+.. -.+.+++..... .+..++++||
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~lv~e~ 80 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH---PNLVKYYGVEVH-REKVYIFMEY 80 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC---CChhheeeeEec-CCEEEEEEec
Confidence 356788888999998753 3478888875421 2345567777776643 234555554332 4688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|..+
T Consensus 81 ~~~~~L 86 (264)
T cd06626 81 CSGGTL 86 (264)
T ss_pred CCCCcH
Confidence 998755
No 233
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.25 E-value=0.0015 Score=60.82 Aligned_cols=75 Identities=15% Similarity=0.121 Sum_probs=44.2
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCce
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS 120 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~ 120 (326)
-++.++.|..+.||++... +..+++|..... ....+..|..+++.+... .+.+++...... ....
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~ 101 (359)
T cd07876 25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK---NIISLLNVFTPQKSLEEFQDV 101 (359)
T ss_pred EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCC---CEeeeeeeeccCCCcccccee
Confidence 3567889999999999763 337888876431 122344566666655421 223333221110 1356
Q ss_pred EEEEeeecCC
Q 020393 121 YIIMEFIEFG 130 (326)
Q Consensus 121 ~~v~e~l~G~ 130 (326)
+++||+++|.
T Consensus 102 ~lv~e~~~~~ 111 (359)
T cd07876 102 YLVMELMDAN 111 (359)
T ss_pred EEEEeCCCcC
Confidence 9999999763
No 234
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.24 E-value=0.0021 Score=59.85 Aligned_cols=71 Identities=11% Similarity=-0.061 Sum_probs=47.2
Q ss_pred eeEeEeCCccccceEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 52 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
.-++.++.|....||+..... ..+++|+.... ....|..+++.+... .+++++..... .+..+++|+++.|
T Consensus 69 ~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~~~ 141 (357)
T PHA03209 69 TVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---TTLIEAMLLQNVNHP---SVIRMKDTLVS-GAITCMVLPHYSS 141 (357)
T ss_pred EEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---ccHHHHHHHHhCCCC---CCcChhheEEe-CCeeEEEEEccCC
Confidence 345678889999999988643 36888986432 234688877777542 34555543322 4578899998865
No 235
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.24 E-value=0.0025 Score=61.65 Aligned_cols=69 Identities=12% Similarity=-0.009 Sum_probs=47.3
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
...++.|..+.||+..... ..+++|.... .....|.++++.|... .+.+++..... .+..+++|++..|
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~iL~~L~Hp---nIv~l~~~~~~-~~~~~lv~e~~~~ 244 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEARLLRRLSHP---AVLALLDVRVV-GGLTCLVLPKYRS 244 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHHHHHHCCCC---CCCcEEEEEEE-CCEEEEEEEccCC
Confidence 4567888899999988753 3688886432 2356799888888542 35556654332 4678999998865
No 236
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.24 E-value=0.0042 Score=58.29 Aligned_cols=140 Identities=19% Similarity=0.142 Sum_probs=82.9
Q ss_pred eEeEeCCccccceEEEEe--CCccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 53 KICPVGGGCINLASRYGT--DAGSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
-.+.++.|..+.|+.... ++..+.+|+.... ....+..|..+++.+..+ + .+-+++..-.+ ....|+
T Consensus 21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~H-p-nI~~l~ev~~t-~~~~~i 97 (370)
T KOG0583|consen 21 LGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSH-P-NIIRLLEVFAT-PTKIYI 97 (370)
T ss_pred eeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccC-C-CEeEEEEEEec-CCeEEE
Confidence 345678889999988754 2346777865331 123455788888877643 2 33344433333 456999
Q ss_pred EEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHH
Q 020393 123 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI 202 (326)
Q Consensus 123 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~ 202 (326)
||||+.|+.+ +..+..... + . +. .+
T Consensus 98 vmEy~~gGdL----------~~~i~~~g~----l-----------~------E~---------------~a--------- 122 (370)
T KOG0583|consen 98 VMEYCSGGDL----------FDYIVNKGR----L-----------K------ED---------------EA--------- 122 (370)
T ss_pred EEEecCCccH----------HHHHHHcCC----C-----------C------hH---------------HH---------
Confidence 9999988433 444444111 0 0 00 00
Q ss_pred HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEccc-cccCc
Q 020393 203 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPA-CYYGH 255 (326)
Q Consensus 203 ~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID~~-~~~G~ 255 (326)
+..+.+++..+.- . ...+++|+||++.|+|++.+ +..-|+||. +...+
T Consensus 123 r~~F~Qlisav~y-~----H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 123 RKYFRQLISAVAY-C----HSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred HHHHHHHHHHHHH-H----HhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 1122333333331 1 34589999999999999988 778999984 44443
No 237
>TIGR02569 TIGR02569_actnb conserved hypothetical protein TIGR02569, Actinobacterial. This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown.
Probab=97.24 E-value=0.022 Score=49.80 Aligned_cols=209 Identities=12% Similarity=0.149 Sum_probs=108.9
Q ss_pred eEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhc---CCCCCcceeeecccC-CCceEEEEeeecCC
Q 020393 55 CPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYET---RTIRAPRPFKVGALP-TGGSYIIMEFIEFG 130 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~---~~~~vP~~~~~~~~~-~~~~~~v~e~l~G~ 130 (326)
+++++ .....||+ |..|+|...... |..+...+.+. .++.+.+|+..-+.. --..|-..+|++|.
T Consensus 19 ~~Lg~-~w~~gwr~----G~vVls~v~~~~------~AaWsAkvre~L~~~GvRvaRPvrstDGRyVv~GWrA~~fv~G~ 87 (272)
T TIGR02569 19 IQLGA-AWDGGWRV----GNVVFSMVADPA------RSAWSARVRETLFPDGVRVVRPVRSTDGRYVVAGWRADTFVAGT 87 (272)
T ss_pred ccCCC-CCCCcEEe----ccEEEeccCCch------hhhhhHHhhhhccCCCeeEecceecCCCCeEecceeeccccCCC
Confidence 34554 44666787 578998754322 23334444332 267778888764321 12456667888987
Q ss_pred CCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHH-HhhhHHHHHHH-------Hhh-cCChH
Q 020393 131 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA-EHRLGYQLKLA-------LDQ-YGDST 201 (326)
Q Consensus 131 ~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~-~~~l~~~~~~~-------~~~-~~~~~ 201 (326)
......++..+--+||...... +.+.+.. .|.+ .+.|. ..+.. +.+.. ... ...+
T Consensus 88 -~~~R~DEvv~aalrlh~Ala~~-----~~P~fl~------~~~~--~d~fa~ADraA-W~e~p~~~~~~~~~~~~~~~- 151 (272)
T TIGR02569 88 -PEPRVDETVVAALRLHEALGDL-----ERPGPAA------PWAE--IDVFVAADRAA-WEERPLQSVPPGVPTAPPAA- 151 (272)
T ss_pred -cCcchHHHHHHHHHHHHHHhcC-----CCCcccc------ccch--hhHHHHHHHHH-hhcccccccccccccccccc-
Confidence 4466777777777888887642 1121111 1211 11221 11111 00000 000 0000
Q ss_pred HHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhh----hh-cCCChHhHHHh
Q 020393 202 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS----WC-AGFGGSFYNSY 276 (326)
Q Consensus 202 ~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~----~~-~~~~~~fl~~Y 276 (326)
.....-++..++.++.+....+..++||||. ||+||.+..-++|+|.-.++-+..|=-+.+ .+ ++.++.+++.+
T Consensus 152 ~~~~~~~l~~~l~~lrrpv~~p~QlvHgDl~-gt~lF~g~~~P~itDi~pywRP~~waaAvvvVDal~wg~ad~~ll~rw 230 (272)
T TIGR02569 152 DPQRSIDLINQIAGLLKPIKSPNQVVHADMY-ATTLYAGTQPPGVTDLVPVWRPAGWTAAVAIVDALLWGAVDEGIIERF 230 (272)
T ss_pred hhhHHHHHHHHHHHHhcccCCCcceeeeecc-cceeecCCCCCceeecccccCcchhhhHHHHHHHHHhcCCCHHHHHHh
Confidence 1111122233333333333567889999997 679998777789999654554555554533 12 56678888886
Q ss_pred hhhCCCCcCHHH---HHHHHHH
Q 020393 277 FEVMPKQPGFEK---RRDLYML 295 (326)
Q Consensus 277 ~~~~~l~~~~~~---r~~~y~l 295 (326)
... ++|.+ |..+|.+
T Consensus 231 ~h~----p~~~QlllRAllfRl 248 (272)
T TIGR02569 231 SHL----PEWPQLLLRALMFRL 248 (272)
T ss_pred ccC----cchHHHHHHHHHHHH
Confidence 533 45544 5555544
No 238
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.23 E-value=0.0047 Score=54.55 Aligned_cols=77 Identities=25% Similarity=0.121 Sum_probs=48.0
Q ss_pred eeEeEeCCccccceEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 52 TKICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~-----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
.-.+.++.|..+.+|+..... ..+.+|...... ...+..|..+++.+.. -.+.+++..... .+..++
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~i 82 (266)
T cd05033 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH---PNIIRLEGVVTK-SRPVMI 82 (266)
T ss_pred eeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC---CCcceEeEEEec-CCceEE
Confidence 345677888889999986532 257888765421 2234557766666542 234444443322 467899
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+||+.+|.++
T Consensus 83 v~e~~~~~~L 92 (266)
T cd05033 83 ITEYMENGSL 92 (266)
T ss_pred EEEcCCCCCH
Confidence 9999998754
No 239
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.23 E-value=0.0029 Score=56.38 Aligned_cols=73 Identities=14% Similarity=0.030 Sum_probs=48.0
Q ss_pred EeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 56 PVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
.++.|..+.+|++... +..+++|...... ...+..|..+++.+.. -.+++++..... .+..+++||+++|.
T Consensus 12 ~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~~ 87 (280)
T cd06611 12 ELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH---PNIVGLYEAYFY-ENKLWILIEFCDGG 87 (280)
T ss_pred HhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC---CceeEEEEEEec-CCeEEEEeeccCCC
Confidence 3667788899998764 3378888875432 2235567777766652 235555554332 56889999999987
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
.+
T Consensus 88 ~L 89 (280)
T cd06611 88 AL 89 (280)
T ss_pred cH
Confidence 55
No 240
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=97.22 E-value=0.004 Score=56.78 Aligned_cols=92 Identities=12% Similarity=0.036 Sum_probs=55.6
Q ss_pred CchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC---c---chHHHHHHHHHHHHhcCCCC
Q 020393 34 SDDPIREWILSEGKATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---P---SMFEGEALGLGAMYETRTIR 105 (326)
Q Consensus 34 ~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~---~~~~~E~~~l~~L~~~~~~~ 105 (326)
+.+++.....+..++.-......++.|..+.+|+.... +..+++|...... . ..+..|.+.++.+.. ..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~ 82 (313)
T cd06633 6 KDPEIADLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH---PN 82 (313)
T ss_pred CCHHHHHHhccCCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC---CC
Confidence 45566666555433323445667888999999998753 3368888765321 1 224456666666642 23
Q ss_pred CcceeeecccCCCceEEEEeeecC
Q 020393 106 APRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 106 vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
++.++..... ....|++|||+.|
T Consensus 83 iv~~~~~~~~-~~~~~lv~e~~~~ 105 (313)
T cd06633 83 TIEYKGCYLK-EHTAWLVMEYCLG 105 (313)
T ss_pred CccEEEEEEe-CCEEEEEEecCCC
Confidence 4445544322 4578999999976
No 241
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.22 E-value=0.0046 Score=52.65 Aligned_cols=75 Identities=17% Similarity=0.073 Sum_probs=51.2
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.+.++.|....+|++...+ ..+++|..... ....+..|.+.++.+.. ..+++++..... ....++++|++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~ 79 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH---PNIVKLYGVFED-PEPLYLVMEYC 79 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC---CChhhheeeeec-CCceEEEEecc
Confidence 3567778888999998864 47999998753 23456667777776632 245555554332 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 80 ~~~~L 84 (225)
T smart00221 80 EGGDL 84 (225)
T ss_pred CCCCH
Confidence 98643
No 242
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=97.22 E-value=0.00088 Score=59.46 Aligned_cols=76 Identities=11% Similarity=0.018 Sum_probs=48.6
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.+.++.|..+.+|++... +..+++|+.... ....+..|.++++.+..+ -.+++++..... .+..+++||
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~-~~~~~lv~e 82 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH--PGIIKLYYTFQD-EENLYFVLE 82 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccC--CCchhHHHHhcC-CceEEEEEc
Confidence 345788888999998764 337888987531 123345677777666522 234555443222 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|.++
T Consensus 83 ~~~~~~L 89 (280)
T cd05581 83 YAPNGEL 89 (280)
T ss_pred CCCCCcH
Confidence 9988755
No 243
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.22 E-value=0.0065 Score=54.23 Aligned_cols=79 Identities=19% Similarity=0.130 Sum_probs=50.0
Q ss_pred eeeEeEeCCccccceEEEEeC------CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCce
Q 020393 51 ITKICPVGGGCINLASRYGTD------AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS 120 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~------~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~ 120 (326)
..-++.++.|..+.+|+.... +..+++|...... ...+..|.++++.+.. -.+++++...... ....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CCeeEEEEEEccCCCCce
Confidence 344567888889999998632 2368888875432 2345678877776642 2244444432221 3467
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
+++|||++|.++
T Consensus 83 ~lv~e~~~~~~L 94 (284)
T cd05081 83 RLVMEYLPYGSL 94 (284)
T ss_pred EEEEEecCCCCH
Confidence 899999998765
No 244
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.22 E-value=0.0044 Score=54.02 Aligned_cols=75 Identities=16% Similarity=0.024 Sum_probs=49.4
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.+.++.|....+|+.... +..+++|...... ...+..|.+.++.+.. -.+++++..... .+..+++|++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~ 80 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH---PNIVKYIGSIET-SDSLYIILEY 80 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCC---CCccEEEEEEEe-CCEEEEEEec
Confidence 466788888999998764 3378999886532 2335667777666643 234455544332 4688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 81 ~~~~~L 86 (254)
T cd06627 81 AENGSL 86 (254)
T ss_pred CCCCcH
Confidence 988643
No 245
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.21 E-value=0.0035 Score=55.35 Aligned_cols=74 Identities=14% Similarity=0.044 Sum_probs=46.9
Q ss_pred eEeCCccccceEEEEeC--CccEEEEecCCCC---c---------chHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393 55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---P---------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 120 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~---------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 120 (326)
..++.|..+.+|+.... +..+++|...... . ..+..|..+++.+.. -.+++++..... .+..
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~ 81 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH---ENIVQYLGSSLD-ADHL 81 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEe-CCcc
Confidence 34677888899998753 3478888764321 1 234567777776643 234555544332 5688
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
+++||+++|..+
T Consensus 82 ~lv~e~~~~~~L 93 (267)
T cd06628 82 NIFLEYVPGGSV 93 (267)
T ss_pred EEEEEecCCCCH
Confidence 999999998654
No 246
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.20 E-value=0.00096 Score=58.98 Aligned_cols=77 Identities=13% Similarity=0.037 Sum_probs=50.8
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCceEEEE
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIM 124 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~~~v~ 124 (326)
++.++.|....+|++.... ..+++|...... ...+..|..+++.+..+ -.+++++...... ....+++|
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~lv~ 88 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH--PNIATFYGAFIKKNPPGNDDQLWLVM 88 (275)
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCC--CChheEEEEEEecCCCCcceEEEEEE
Confidence 4667778888899988642 368889876432 24466788888877544 3455565543210 23579999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
|+++|..+
T Consensus 89 e~~~~~~L 96 (275)
T cd06608 89 ELCGGGSV 96 (275)
T ss_pred EcCCCCcH
Confidence 99998754
No 247
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.20 E-value=0.0033 Score=56.10 Aligned_cols=72 Identities=19% Similarity=0.133 Sum_probs=47.2
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++.++.|..+.+|+.+.. +..+++|..... . ...+..|...++.+.. -.+++++..... ++..+++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~ 80 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH---PNIVCLQDVLMQ-ESRLYLIFEF 80 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC---CCEeeeEEEEee-CCeEEEEEec
Confidence 456788888999999764 337888876531 1 2345667777776642 235555544322 4688999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
++|
T Consensus 81 ~~~ 83 (285)
T cd07861 81 LSM 83 (285)
T ss_pred CCC
Confidence 875
No 248
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.20 E-value=0.0044 Score=54.65 Aligned_cols=71 Identities=14% Similarity=0.074 Sum_probs=45.6
Q ss_pred eCCccccceEEEEeC--C-c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTD--A-G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~--~-~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|..+.+|+.... + + .+.+|+..... ...+..|..+++.+.. ..+.+++.... ....+++|||++
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h---~~ii~~~~~~~--~~~~~lv~e~~~ 77 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN---PYIVRMIGVCE--AEALMLVMEMAS 77 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC---CCeEEEEEEEc--CCCeEEEEEeCC
Confidence 677888899986542 2 2 47888875432 2335678887777743 23444444332 357899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|.++
T Consensus 78 ~~~L 81 (257)
T cd05115 78 GGPL 81 (257)
T ss_pred CCCH
Confidence 8765
No 249
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=97.20 E-value=0.0038 Score=55.56 Aligned_cols=132 Identities=19% Similarity=0.216 Sum_probs=78.4
Q ss_pred eEeEeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceee-ecccCCCceEEE
Q 020393 53 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFK-VGALPTGGSYII 123 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~-~~~~~~~~~~~v 123 (326)
-+..+|.|....|-.|+... | -|-+|+-... +.+....|..+|+.+. .|.+.-+. ...+ .+.-|+|
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~----~PFlv~l~~t~~d-~~~lymv 122 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS----HPFLVKLYGTFKD-NSNLYMV 122 (355)
T ss_pred heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc----CceeEEEEEeecc-CCeEEEE
Confidence 35567889999999998743 4 4666776532 1223445666666553 33333332 2221 4688999
Q ss_pred EeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393 124 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 203 (326)
Q Consensus 124 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 203 (326)
|++++|+.+ ..-+++... |. +.-..||..+ +
T Consensus 123 meyv~GGEl----------FS~Lrk~~r----F~-----------------e~~arFYAAe-i----------------- 153 (355)
T KOG0616|consen 123 MEYVPGGEL----------FSYLRKSGR----FS-----------------EPHARFYAAE-I----------------- 153 (355)
T ss_pred EeccCCccH----------HHHHHhcCC----CC-----------------chhHHHHHHH-H-----------------
Confidence 999999754 334444332 21 1112344321 1
Q ss_pred HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc
Q 020393 204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP 249 (326)
Q Consensus 204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~ 249 (326)
+- .++ ++ ....++..||+|.|||+|.+|..-|.||
T Consensus 154 --vl-Ale----yl----H~~~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 154 --VL-ALE----YL----HSLDIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred --HH-HHH----HH----HhcCeeeccCChHHeeeccCCcEEEEec
Confidence 11 111 11 2457999999999999999998899996
No 250
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.20 E-value=0.0041 Score=58.82 Aligned_cols=70 Identities=11% Similarity=-0.032 Sum_probs=46.6
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
-++.++.|..+.+|+.... ...+++|.... ..+..|+++++.|..- .+.+++..... .+..+++++++.|
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~l~Hp---nIv~~~~~~~~-~~~~~lv~e~~~~ 167 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRAINHP---SIIQLKGTFTY-NKFTCLILPRYKT 167 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHhCCCC---CCCCEeEEEEE-CCeeEEEEecCCC
Confidence 3567888999999998763 23678886532 3356899988888542 34445443322 4577889888754
No 251
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.20 E-value=0.0041 Score=56.37 Aligned_cols=79 Identities=11% Similarity=0.082 Sum_probs=51.0
Q ss_pred eeeEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 51 ITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
..-.+.++.|..+.+|+.+.. ...+.+|...... ...+..|.++++.+..+ -.+.+++..... .+.
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~ 113 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH--ENIVNLLGACTI-GGP 113 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCC--CCcceEEEEEec-CCc
Confidence 334556788888899987631 1257788765421 23456788888887543 245555544332 467
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++||+++|.++
T Consensus 114 ~~lv~e~~~~~~L 126 (302)
T cd05055 114 ILVITEYCCYGDL 126 (302)
T ss_pred eEEEEEcCCCCcH
Confidence 8999999998755
No 252
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.19 E-value=0.0062 Score=55.44 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=50.9
Q ss_pred ceeeEeEeCCccccceEEEEeC---------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC
Q 020393 50 HITKICPVGGGCINLASRYGTD---------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP 116 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~---------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~ 116 (326)
+..-.+.++.|....+|+++.. ...+++|...... ...+..|...++.+..+ -.+.+++.....
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~- 89 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH--KNIINLLGVCTQ- 89 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC--CCeeeEEEEEcc-
Confidence 3444567888999999998631 1257788875421 12345677777766433 235555554332
Q ss_pred CCceEEEEeeecCCCC
Q 020393 117 TGGSYIIMEFIEFGSS 132 (326)
Q Consensus 117 ~~~~~~v~e~l~G~~~ 132 (326)
.+..+++||+++|.++
T Consensus 90 ~~~~~lv~e~~~~g~L 105 (314)
T cd05099 90 EGPLYVIVEYAAKGNL 105 (314)
T ss_pred CCceEEEEecCCCCcH
Confidence 4678999999998765
No 253
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.19 E-value=0.0034 Score=55.63 Aligned_cols=76 Identities=16% Similarity=0.049 Sum_probs=48.6
Q ss_pred eEeEeCCccccceEEEEeC-C-ccEEEEecCCC----Cc---------chHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393 53 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GP---------SMFEGEALGLGAMYETRTIRAPRPFKVGALPT 117 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~---------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~ 117 (326)
..+.++.|..+.+|+.... + ..+++|..... .. ..+..|...++.+.. ..+++++..... .
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~ 80 (272)
T cd06629 5 KGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH---LNIVQYLGFETT-E 80 (272)
T ss_pred ecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC---CCcceEEEEecc-C
Confidence 3456888899999998643 3 36888865421 00 124456666666642 235566655433 4
Q ss_pred CceEEEEeeecCCCC
Q 020393 118 GGSYIIMEFIEFGSS 132 (326)
Q Consensus 118 ~~~~~v~e~l~G~~~ 132 (326)
+..+++||+++|.++
T Consensus 81 ~~~~lv~e~~~~~~L 95 (272)
T cd06629 81 EYLSIFLEYVPGGSI 95 (272)
T ss_pred CceEEEEecCCCCcH
Confidence 688999999998754
No 254
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.19 E-value=0.0031 Score=55.45 Aligned_cols=75 Identities=13% Similarity=0.128 Sum_probs=43.6
Q ss_pred eEeCCccccceEEEEeC--CccEEEEecCCCC---cch---HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSM---FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~---~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++++.|..+.+|+.... +..+++|..+... ... +..|...+..... ...+++++..... .+..++++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~i~~~~~~~~~-~~~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGE--SPYVAKLYYSFQS-KDYLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCC--CCCeeeeeeeEEc-CCeEEEEEec
Confidence 45778888999998763 3478889875421 111 1223322222212 1234555544332 4688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 79 ~~~~~L 84 (260)
T cd05611 79 LNGGDC 84 (260)
T ss_pred cCCCCH
Confidence 999765
No 255
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=97.19 E-value=0.00024 Score=72.93 Aligned_cols=130 Identities=18% Similarity=0.221 Sum_probs=78.5
Q ss_pred eCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
||.|.++.|..|.-.. + -|-.|+-.. .+.+.|..|..++-.-... =+-.+.++-.+ +..-|+||+|.+
T Consensus 83 IGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~---Wiv~LhyAFQD-~~~LYlVMdY~p 158 (1317)
T KOG0612|consen 83 IGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSE---WIVQLHYAFQD-ERYLYLVMDYMP 158 (1317)
T ss_pred hcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcH---HHHHHHHHhcC-ccceEEEEeccc
Confidence 6888999999887632 3 355555432 1235677777766321100 01112222221 468899999999
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHH
Q 020393 129 FGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR 208 (326)
Q Consensus 129 G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 208 (326)
|+++ |.-|-+ |+ + +| ++|..||..+. + -
T Consensus 159 GGDl----------ltLlSk-------~~-~-------~p------E~~ArFY~aEi--------------------V-l 186 (1317)
T KOG0612|consen 159 GGDL----------LTLLSK-------FD-R-------LP------EDWARFYTAEI--------------------V-L 186 (1317)
T ss_pred CchH----------HHHHhh-------cC-C-------Ch------HHHHHHHHHHH--------------------H-H
Confidence 9755 544433 22 1 11 57888886421 0 0
Q ss_pred HHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 209 LMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 209 l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
.++.+ ..-++||.|++|+|||+|..|..-+=||.
T Consensus 187 Aldsl--------H~mgyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 187 ALDSL--------HSMGYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred HHHHH--------HhccceeccCCcceeEecccCcEeeccch
Confidence 11111 24589999999999999999988888874
No 256
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.19 E-value=0.0047 Score=54.65 Aligned_cols=75 Identities=19% Similarity=0.069 Sum_probs=46.7
Q ss_pred EeEeCCccccceEEEEeC--Cc---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 54 ICPVGGGCINLASRYGTD--AG---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.+.++.|..+.+|+.... ++ .+.+|...... ...+..|..+++.+.. -.+.+++..... ++..+++|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~ 84 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SKPVMIVT 84 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCccEEEE
Confidence 456788888999987642 22 57788765321 2345567766666532 134444443322 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
|+++|.++
T Consensus 85 e~~~~~~L 92 (267)
T cd05066 85 EYMENGSL 92 (267)
T ss_pred EcCCCCCH
Confidence 99998754
No 257
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.18 E-value=0.002 Score=67.08 Aligned_cols=78 Identities=18% Similarity=0.068 Sum_probs=49.8
Q ss_pred eeEeEeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393 52 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII 123 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v 123 (326)
.-+..|+.|.++.||++.... + .+++|..... ....+..|+.+++.|... .+.+++...... .+..|+|
T Consensus 16 eIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HP---NIVrl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 16 EVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHK---NIVRYIDRFLNKANQKLYIL 92 (1021)
T ss_pred EEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCC---CcCeEEEEEEecCCCEEEEE
Confidence 345678889999999997643 2 5777775431 123456788888777532 244444322111 3568999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|..+
T Consensus 93 MEY~~gGSL 101 (1021)
T PTZ00266 93 MEFCDAGDL 101 (1021)
T ss_pred EeCCCCCcH
Confidence 999998755
No 258
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=97.17 E-value=0.0032 Score=54.86 Aligned_cols=72 Identities=11% Similarity=0.018 Sum_probs=45.2
Q ss_pred eCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|....+|++... +..+++|...... ...+..|...++.+.. ..++.++..... ++..+++||+++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~ 76 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH---PFIVKLHYAFQT-EEKLYLVLEYAP 76 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC---CcHHHHHHHeec-CCeeEEEEecCC
Confidence 356778899998764 3478889875421 1245567776666642 234444433222 468899999998
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|.++
T Consensus 77 ~~~L 80 (250)
T cd05123 77 GGEL 80 (250)
T ss_pred CCcH
Confidence 7654
No 259
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.17 E-value=0.0026 Score=56.72 Aligned_cols=72 Identities=13% Similarity=0.034 Sum_probs=43.9
Q ss_pred eCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|..+.+|++... +..|.+|..... ....+..|.++++.+.. + .++..+..... .+..+++|||++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~-~~~~~lv~e~~~ 76 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS--R-FIVSLAYAFET-KDDLCLVMTLMN 76 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC--C-CEeeeeeEEec-CCeEEEEEecCC
Confidence 356778899998753 336888877531 12234467777776642 1 23333322222 468899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|.++
T Consensus 77 ~~~L 80 (277)
T cd05577 77 GGDL 80 (277)
T ss_pred CCcH
Confidence 8655
No 260
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.17 E-value=0.00096 Score=58.17 Aligned_cols=76 Identities=17% Similarity=0.069 Sum_probs=48.4
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e 125 (326)
.+.++.|....+|+.... +..+++|...... ...+..|...++.+.. -.+.+++...... ....++++|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH---PNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC---CCEeeEEEEEecCCCCeEEEEEE
Confidence 356777888899998765 3378888876432 3445667777776652 2244444433321 157899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|.++
T Consensus 82 ~~~~~~L 88 (260)
T cd06606 82 YVSGGSL 88 (260)
T ss_pred ecCCCcH
Confidence 9987643
No 261
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.17 E-value=0.0045 Score=54.90 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=46.1
Q ss_pred eCCccccceEEEEeCC-c---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTDA-G---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~-~---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|..+.+|++...+ + .+.+|..... ....+..|.+.+..+..+ + .+.+++..... .+..+++||+.+
T Consensus 3 lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~~~-~~~~~lv~e~~~ 79 (270)
T cd05047 3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH-P-NIINLLGACEH-RGYLYLAIEYAP 79 (270)
T ss_pred CCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccC-C-CeeeEEEEEec-CCCceEEEEeCC
Confidence 5678888999987643 2 3466665431 123456788888777543 1 24445544332 467899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|.++
T Consensus 80 ~~~L 83 (270)
T cd05047 80 HGNL 83 (270)
T ss_pred CCcH
Confidence 8755
No 262
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.16 E-value=0.004 Score=55.91 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=47.6
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceE
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSY 121 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~ 121 (326)
..+.++.|..+.+|+.... +..+++|..... ....+..|..+++.+.++ -.+++++...... ....|
T Consensus 5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES--IYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCC--CCccceeeeEeecCCCCCceEE
Confidence 3456788888999998764 337888986532 123456788888888643 2344555433221 12379
Q ss_pred EEEeeecC
Q 020393 122 IIMEFIEF 129 (326)
Q Consensus 122 ~v~e~l~G 129 (326)
++|||++|
T Consensus 83 lv~e~~~~ 90 (295)
T cd07837 83 LVFEYLDS 90 (295)
T ss_pred EEeeccCc
Confidence 99999976
No 263
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.16 E-value=0.0013 Score=62.09 Aligned_cols=72 Identities=8% Similarity=-0.069 Sum_probs=46.9
Q ss_pred eeEeEeCCccccceEEEEeCC----ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 52 TKICPVGGGCINLASRYGTDA----GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~----~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.-+..++.|....||+....+ ..+++|..... .....|.++++.|... .+.+++..... .+..+++|++.
T Consensus 95 ~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~ 168 (392)
T PHA03207 95 NILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKTISHR---AIINLIHAYRW-KSTVCMVMPKY 168 (392)
T ss_pred EEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHhcCCC---CccceeeeEee-CCEEEEEehhc
Confidence 345668889999999986432 25788876542 2346788888888532 34445543322 45788999987
Q ss_pred cC
Q 020393 128 EF 129 (326)
Q Consensus 128 ~G 129 (326)
.|
T Consensus 169 ~~ 170 (392)
T PHA03207 169 KC 170 (392)
T ss_pred CC
Confidence 65
No 264
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.16 E-value=0.0029 Score=58.97 Aligned_cols=75 Identities=13% Similarity=0.144 Sum_probs=44.0
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeee---ccc-C-CCce
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKV---GAL-P-TGGS 120 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~---~~~-~-~~~~ 120 (326)
-++.++.|..+.||++... +..+++|..... ....+..|..+++.+... .+..++.. ... . ....
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~ii~~~~~~~~~~~~~~~~~~ 104 (364)
T cd07875 28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIIGLLNVFTPQKSLEEFQDV 104 (364)
T ss_pred EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCC---CccccceeecccccccccCeE
Confidence 3466888999999998753 336888876531 122344677766666432 12222221 111 0 2357
Q ss_pred EEEEeeecCC
Q 020393 121 YIIMEFIEFG 130 (326)
Q Consensus 121 ~~v~e~l~G~ 130 (326)
|+|||+++|.
T Consensus 105 ~lv~e~~~~~ 114 (364)
T cd07875 105 YIVMELMDAN 114 (364)
T ss_pred EEEEeCCCCC
Confidence 9999999763
No 265
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.16 E-value=0.0051 Score=55.35 Aligned_cols=73 Identities=11% Similarity=-0.028 Sum_probs=44.8
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCCc--------chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIGP--------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~--------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
++.++.|..+.+|+.... +..+++|....... ..+..|.+.++.+.. ..+.+++..... .+..++|
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv 80 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH---PNIIGLLDVFGH-KSNINLV 80 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC---CCChhhhheeec-CCEEEEE
Confidence 345788888999998753 34789988764211 123456666665542 223444433322 4688999
Q ss_pred EeeecCCC
Q 020393 124 MEFIEFGS 131 (326)
Q Consensus 124 ~e~l~G~~ 131 (326)
||++ +..
T Consensus 81 ~e~~-~~~ 87 (298)
T cd07841 81 FEFM-ETD 87 (298)
T ss_pred Eccc-CCC
Confidence 9999 543
No 266
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.14 E-value=0.0092 Score=53.26 Aligned_cols=75 Identities=13% Similarity=0.083 Sum_probs=48.1
Q ss_pred EeEeCCccccceEEEEe---C--C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 54 ICPVGGGCINLASRYGT---D--A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~---~--~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
.+.++.|..+.+|+... + . ..+.+|...... ...+..|.++++.+.. -.+++++..... ....+++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv 85 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH---PNIVCLLGVVTQ-EQPVCML 85 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC---CCeeeEEEEEec-CCceEEE
Confidence 36678888899999763 1 2 267778775321 1345668777777743 234555544332 4578999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|.++
T Consensus 86 ~e~~~~~~L 94 (283)
T cd05090 86 FEYLNQGDL 94 (283)
T ss_pred EEcCCCCcH
Confidence 999998755
No 267
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.14 E-value=0.0026 Score=57.34 Aligned_cols=74 Identities=18% Similarity=0.089 Sum_probs=49.0
Q ss_pred eEeCCccccceEEEEeCC----------------ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecc
Q 020393 55 CPVGGGCINLASRYGTDA----------------GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGA 114 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~----------------~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~ 114 (326)
+.++.|....+|++...+ ..+++|..+.. . ...+..|.++++.+.. ..+++++....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~ 87 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN---PNIIRLLGVCV 87 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEc
Confidence 457888888899876432 13788887642 1 2345678877777643 24566665543
Q ss_pred cCCCceEEEEeeecCCCC
Q 020393 115 LPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 115 ~~~~~~~~v~e~l~G~~~ 132 (326)
. .+..+++||+++|.++
T Consensus 88 ~-~~~~~lv~e~~~~~~L 104 (295)
T cd05097 88 S-DDPLCMITEYMENGDL 104 (295)
T ss_pred C-CCccEEEEecCCCCcH
Confidence 3 4678999999998765
No 268
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.13 E-value=0.0039 Score=55.92 Aligned_cols=76 Identities=17% Similarity=0.151 Sum_probs=47.3
Q ss_pred eEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 53 KICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
-.+.++.|..+.+|+.... ...+.+|...... ...+..|...++.+.. -.+++++..... .+..+
T Consensus 10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~ 85 (288)
T cd05061 10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC---HHVVRLLGVVSK-GQPTL 85 (288)
T ss_pred eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCcE
Confidence 3567888999999987532 1268888764321 1123346555555532 235556654332 45789
Q ss_pred EEEeeecCCCC
Q 020393 122 IIMEFIEFGSS 132 (326)
Q Consensus 122 ~v~e~l~G~~~ 132 (326)
++|||++|.++
T Consensus 86 lv~e~~~~g~L 96 (288)
T cd05061 86 VVMELMAHGDL 96 (288)
T ss_pred EEEeCCCCCCH
Confidence 99999998765
No 269
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.13 E-value=0.0024 Score=56.08 Aligned_cols=75 Identities=15% Similarity=0.130 Sum_probs=48.7
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.+.++.|....+|+++.. +..+++|...... ...+..|...+..+.. ..+++++..... .+..+++||++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES---PYVVKCYGAFYK-EGEISIVLEYM 81 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEcc-CCeEEEEEEec
Confidence 456777778889998765 3478889876432 2345567666666652 234445443322 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 82 ~~~~L 86 (264)
T cd06623 82 DGGSL 86 (264)
T ss_pred CCCcH
Confidence 98754
No 270
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.13 E-value=0.0059 Score=54.67 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=49.4
Q ss_pred eeEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393 52 TKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 120 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 120 (326)
.-+..++.|..+.+|++... ...+.+|...... ...+..|...++.+.. -.+.+++..... +...
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~iv~~~~~~~~-~~~~ 83 (288)
T cd05050 8 EYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH---PNIVKLLGVCAV-GKPM 83 (288)
T ss_pred eecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC---CchheEEEEEcC-CCcc
Confidence 34456788888999998752 3368888875421 2335567777766642 234555544332 4578
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
+++||+.+|..+
T Consensus 84 ~lv~e~~~~~~L 95 (288)
T cd05050 84 CLLFEYMAYGDL 95 (288)
T ss_pred EEEEecCCCCCH
Confidence 999999998654
No 271
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.12 E-value=0.0018 Score=57.65 Aligned_cols=74 Identities=16% Similarity=0.055 Sum_probs=45.3
Q ss_pred eEeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 55 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
+.++.|..+.+|+.... ++ .+++|...... ...+..|...++.+.. -.+++++..... .+..+++||+++
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 85 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYITRYYGSYLK-GTKLWIIMEYLG 85 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC---CccHhhhccccc-CCceEEEEEccC
Confidence 34667778889998653 23 68889875321 1235567666665532 124444433222 467899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|..+
T Consensus 86 ~~~L 89 (277)
T cd06642 86 GGSA 89 (277)
T ss_pred CCcH
Confidence 8654
No 272
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.12 E-value=0.0074 Score=54.14 Aligned_cols=74 Identities=12% Similarity=0.027 Sum_probs=48.4
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCC---C-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.-++.++.|..+.+|+.... ++.+++|..... . ...+..|.+.++.+.. ..+++++..... ++..+++||
T Consensus 8 ~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv~e 83 (291)
T cd07870 8 LNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH---ANIVLLHDIIHT-KETLTFVFE 83 (291)
T ss_pred EEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC---CCEeEEEEEEec-CCeEEEEEe
Confidence 34567888888999998653 458999987532 1 1234567777777643 234455544332 457899999
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
++++
T Consensus 84 ~~~~ 87 (291)
T cd07870 84 YMHT 87 (291)
T ss_pred cccC
Confidence 9965
No 273
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.12 E-value=0.0035 Score=57.52 Aligned_cols=73 Identities=12% Similarity=0.098 Sum_probs=43.1
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEE
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~ 122 (326)
.+.++.|..+.+|++... +..+++|..... ....+..|..+++.+... .+.+++...... ....|+
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHP---DIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCC---CEeeecceEeccCCCCCceEEE
Confidence 356788888999998753 337888876421 122355688777776432 122222221110 135799
Q ss_pred EEeeecC
Q 020393 123 IMEFIEF 129 (326)
Q Consensus 123 v~e~l~G 129 (326)
+||+++|
T Consensus 82 v~e~~~~ 88 (338)
T cd07859 82 VFELMES 88 (338)
T ss_pred EEecCCC
Confidence 9999864
No 274
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.11 E-value=0.0051 Score=55.65 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=49.8
Q ss_pred eEeEeCCccccceEEEEeC--------C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 53 KICPVGGGCINLASRYGTD--------A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--------~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
-.++++.|..+.+|+.... + ..+++|..... ....+..|..+++.+..+ -.+.+++..... .+.
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~ 95 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-DGP 95 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccC--CCchheeEEEec-CCc
Confidence 3467888889999988631 1 15788877532 123456788888877544 234455544332 467
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++|||+++.++
T Consensus 96 ~~lv~e~~~~~~L 108 (304)
T cd05101 96 LYVIVEYASKGNL 108 (304)
T ss_pred eEEEEecCCCCcH
Confidence 8999999998755
No 275
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.11 E-value=0.0045 Score=55.77 Aligned_cols=76 Identities=17% Similarity=0.091 Sum_probs=49.6
Q ss_pred eEeEeCCccccceEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccee
Q 020393 53 KICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPF 110 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~-----------------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~ 110 (326)
-.+.++.|..+.+|++...+ + .+.+|...... ...+..|...++.+.. ..+++++
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~ 85 (296)
T cd05095 9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD---PNIIRLL 85 (296)
T ss_pred eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcceEE
Confidence 35568889999999875321 1 46778775421 2345678887777743 3455666
Q ss_pred eecccCCCceEEEEeeecCCCC
Q 020393 111 KVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 111 ~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
..... .+..+++||+++|.++
T Consensus 86 ~~~~~-~~~~~lv~e~~~~~~L 106 (296)
T cd05095 86 AVCIT-SDPLCMITEYMENGDL 106 (296)
T ss_pred EEEec-CCccEEEEEeCCCCcH
Confidence 55433 4678999999998755
No 276
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.11 E-value=0.0049 Score=55.24 Aligned_cols=74 Identities=14% Similarity=0.081 Sum_probs=48.7
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.-++.++.|..+.+|+.... +..|++|..... ....+..|..+++.+... .+.+++..... ....++|||
T Consensus 8 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e 83 (291)
T cd07844 8 KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHA---NIVTLHDIIHT-KKTLTLVFE 83 (291)
T ss_pred eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCc---ceeeEEEEEec-CCeEEEEEe
Confidence 34567888888999998764 337889986532 122345688888877532 34455544332 468899999
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
|++|
T Consensus 84 ~~~~ 87 (291)
T cd07844 84 YLDT 87 (291)
T ss_pred cCCC
Confidence 9975
No 277
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.10 E-value=0.0038 Score=54.61 Aligned_cols=75 Identities=13% Similarity=0.006 Sum_probs=49.5
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
.+.++.|....+|+....+ ..+++|..+... ...+..|.+.++.+.. ..+++++..... ....++++|+++|.
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~ 83 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDS---PYIVKYYGSYFK-NTDLWIVMEYCGAG 83 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCC---CcEeeeeeeeec-CCcEEEEEecCCCC
Confidence 3446777788899987653 478889876432 3456778877777732 234445543332 46889999999987
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
.+
T Consensus 84 ~L 85 (256)
T cd06612 84 SV 85 (256)
T ss_pred cH
Confidence 54
No 278
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.10 E-value=0.0058 Score=54.24 Aligned_cols=74 Identities=15% Similarity=0.010 Sum_probs=46.7
Q ss_pred eEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
..++.|..+.+|+.... +..+++|...... ...+..|..+++.+.. -.+.+++..... +...++++|+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~ 82 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRS---PYITKYYGSFLK-GSKLWIIMEYCG 82 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCC---CCeeeeeEEEEE-CCeEEEEEEeeC
Confidence 34667778899998754 3378889875421 2235567777777752 123334433222 468899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|.++
T Consensus 83 ~~~L 86 (274)
T cd06609 83 GGSC 86 (274)
T ss_pred CCcH
Confidence 8755
No 279
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.10 E-value=0.0053 Score=55.68 Aligned_cols=78 Identities=18% Similarity=0.134 Sum_probs=50.2
Q ss_pred eeEeEeCCccccceEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393 52 TKICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 118 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~---------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 118 (326)
.=.+.++.|..+.+|++...+ ..+++|...... ...+..|.++++.+..+ -.+.+++..... .+
T Consensus 21 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~-~~ 97 (307)
T cd05098 21 VLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--KNIINLLGACTQ-DG 97 (307)
T ss_pred EEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCC--CCEeeEEEEEec-CC
Confidence 334678888899999886421 258888876421 12345677777777543 234555544332 46
Q ss_pred ceEEEEeeecCCCC
Q 020393 119 GSYIIMEFIEFGSS 132 (326)
Q Consensus 119 ~~~~v~e~l~G~~~ 132 (326)
..+++||+++|.++
T Consensus 98 ~~~lv~e~~~~~~L 111 (307)
T cd05098 98 PLYVIVEYASKGNL 111 (307)
T ss_pred ceEEEEecCCCCcH
Confidence 88999999988755
No 280
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.09 E-value=0.0019 Score=56.98 Aligned_cols=75 Identities=20% Similarity=0.047 Sum_probs=45.8
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
++.++.|....+|++... +..+++|...... ...+..|.+.++.+.. -.+++++..... .+..++++|++
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNS---PYIVGFYGAFYN-NGDISICMEYM 81 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCC---Cchhhhheeeec-CCEEEEEEEec
Confidence 345677888889998775 3368888765421 1234456666655542 123344433222 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 82 ~~~~L 86 (265)
T cd06605 82 DGGSL 86 (265)
T ss_pred CCCcH
Confidence 98654
No 281
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.09 E-value=0.0099 Score=53.05 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=45.7
Q ss_pred eEeCCccccceEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 55 CPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
..++.|....+|+..... + .+++|...... ...+..|.+.++.+... .+++++..... .+..+++|||++|
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~---~ii~~~~~~~~-~~~~~~v~e~~~~ 86 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHP---NIVKLLDAFYY-ENNLWILIEFCAG 86 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCC---CeeeEEEEEee-CCEEEEEEEecCC
Confidence 346677788899987643 3 56677664322 22345677777766432 24445443322 4688999999998
Q ss_pred CCC
Q 020393 130 GSS 132 (326)
Q Consensus 130 ~~~ 132 (326)
..+
T Consensus 87 ~~l 89 (282)
T cd06643 87 GAV 89 (282)
T ss_pred CcH
Confidence 754
No 282
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.08 E-value=0.012 Score=52.95 Aligned_cols=75 Identities=19% Similarity=0.197 Sum_probs=45.9
Q ss_pred eEeCCccccceEEEEeCC-c---cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 55 CPVGGGCINLASRYGTDA-G---SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~-~---~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
+.++.|....+|++...+ + ...+|..... . ...+..|...+..+..+ + .+.+++..... .+..+++||+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~h-p-~iv~~~~~~~~-~~~~~lv~e~ 84 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHH-P-NIINLLGACEN-RGYLYIAIEY 84 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCC-C-chhheEEEEcc-CCcceEEEEe
Confidence 457888889999986533 2 2455655431 1 12355677777777443 1 23445543322 4678999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
.++.++
T Consensus 85 ~~~~~L 90 (297)
T cd05089 85 APYGNL 90 (297)
T ss_pred cCCCcH
Confidence 987654
No 283
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=97.08 E-value=0.0013 Score=64.57 Aligned_cols=79 Identities=19% Similarity=0.114 Sum_probs=50.0
Q ss_pred eeeEeEeCCccccceEEEE-eCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393 51 ITKICPVGGGCINLASRYG-TDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 119 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~-~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~ 119 (326)
.-.-+.+|.|.++.||+-. ...| .+-+|..... .++....|.++++.|... .+.+.+...+.. ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~---NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHP---NIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCch---hhhhhcccCCccccCccccc
Confidence 3444567888999999987 4555 5666877542 345567899999888621 112222111110 246
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
..++|||..|+++
T Consensus 92 ~vlvmEyC~gGsL 104 (732)
T KOG4250|consen 92 PVLVMEYCSGGSL 104 (732)
T ss_pred ceEEEeecCCCcH
Confidence 7999999999866
No 284
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.08 E-value=0.0036 Score=55.85 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=47.6
Q ss_pred eEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 53 KICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
-.+.++.|....+|+..... ..+.+|...... ...+..|...++.+.. -.+.+++..... .+..+
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~~-~~~~~ 84 (283)
T cd05048 9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH---PNIVCLLGVCTK-EQPTC 84 (283)
T ss_pred hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC---cccceEEEEEcC-CCceE
Confidence 35567888888999886532 257888765321 2335567776666643 234445544322 46789
Q ss_pred EEEeeecCCCC
Q 020393 122 IIMEFIEFGSS 132 (326)
Q Consensus 122 ~v~e~l~G~~~ 132 (326)
++|||.+|.++
T Consensus 85 ~~~e~~~~~~L 95 (283)
T cd05048 85 MLFEYLAHGDL 95 (283)
T ss_pred EEEecCCCCcH
Confidence 99999998754
No 285
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.08 E-value=0.0026 Score=56.66 Aligned_cols=75 Identities=17% Similarity=0.119 Sum_probs=44.3
Q ss_pred EeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 54 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
...++.|..+.+|+.... ...+.+|...... ...+..|..+++.+.. -.+.+++..... .+..++
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~l 86 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC---HHVVRLLGVVSQ-GQPTLV 86 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCeEE
Confidence 456788888889976432 1258888764321 1224456666555532 124444443322 467899
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+||+++|.++
T Consensus 87 v~e~~~~~~L 96 (277)
T cd05062 87 IMELMTRGDL 96 (277)
T ss_pred EEecCCCCCH
Confidence 9999998754
No 286
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.07 E-value=0.0066 Score=53.88 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=51.3
Q ss_pred eeeEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 51 ITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
..-++.++.|..+.+|+.... ...+++|...... ...+..|.++++.+.. -.+++++..... .+.
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~ 82 (275)
T cd05046 7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSH---KNVVRLLGLCRE-AEP 82 (275)
T ss_pred ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCC---cceeeeEEEECC-CCc
Confidence 345666888888999998752 2257888775422 1346678888887743 224455544332 467
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++||+++|.++
T Consensus 83 ~~lv~e~~~~~~L 95 (275)
T cd05046 83 HYMILEYTDLGDL 95 (275)
T ss_pred ceEEEEecCCCcH
Confidence 8999999997654
No 287
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.07 E-value=0.0069 Score=55.22 Aligned_cols=78 Identities=18% Similarity=0.170 Sum_probs=49.2
Q ss_pred ceeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 50 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
....+..++.|..+.||+.... ++ .+++|...... ...+..|..+++.+.. -.+.+++.... .+.
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~g~~~--~~~ 82 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TST 82 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEc--CCC
Confidence 3456677899999999998642 22 37888875321 2234566666666643 23455555433 356
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.++++++.+++.+
T Consensus 83 ~~~v~e~~~~g~l 95 (316)
T cd05108 83 VQLITQLMPFGCL 95 (316)
T ss_pred ceeeeecCCCCCH
Confidence 7899999987654
No 288
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.07 E-value=0.0076 Score=52.99 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=44.4
Q ss_pred EeCCccccceEEEEe----CCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 56 PVGGGCINLASRYGT----DAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~----~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.++.|..+.+|+... ++..+.+|+..... ...+..|...++.+.. -.+.+++.... ....+++||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN---PYIVRMIGICE--AESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC---CCcceEEEEEc--CCCcEEEEec
Confidence 467788889998643 23478889875321 1234566666666532 23445554432 3567899999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
.++.++
T Consensus 77 ~~~~~L 82 (257)
T cd05116 77 AELGPL 82 (257)
T ss_pred CCCCcH
Confidence 987655
No 289
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.06 E-value=0.0054 Score=54.53 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=45.4
Q ss_pred EeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++.++.|..+.+|+.... ++ .+++|...... ...+..|...++.+.. -.+.+++..... .+..++++|+
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~ 79 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH---PNIIKLLDVFRH-KGDLYLVFEF 79 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC---CCcchHHHhhcc-CCCEEEEEec
Confidence 356778888899998764 33 68888765421 2345567777777652 223344433222 4688999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
.++
T Consensus 80 ~~~ 82 (283)
T cd05118 80 MDT 82 (283)
T ss_pred cCC
Confidence 876
No 290
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.06 E-value=0.0056 Score=53.65 Aligned_cols=76 Identities=18% Similarity=0.167 Sum_probs=47.9
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
-++.++.|..+.+|++... +..+++|..... ....+..|..+++.+.. -.+++++..... .+..+++||
T Consensus 4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08218 4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH---PNIVQYQESFEE-NGNLYIVMD 79 (256)
T ss_pred EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC---CCeeeeEeeecC-CCeEEEEEe
Confidence 3567888888999998764 337888875421 12235567666666643 124444433222 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|.++
T Consensus 80 ~~~~~~l 86 (256)
T cd08218 80 YCEGGDL 86 (256)
T ss_pred cCCCCcH
Confidence 9998754
No 291
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.06 E-value=0.0021 Score=57.58 Aligned_cols=75 Identities=16% Similarity=0.027 Sum_probs=48.4
Q ss_pred EeEeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
++.++.|..+.+|++... ++ .+++|+.... ....+..|.++++.+.. -.+++++..... .+..+++|||+
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 85 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS---PYIVSFYGAFLN-ENNICMCMEFM 85 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC---CCcceEeeeEec-CCEEEEEEecC
Confidence 455778888999998764 33 5777765432 12345677777776642 234445544332 46889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 86 ~~~~L 90 (284)
T cd06620 86 DCGSL 90 (284)
T ss_pred CCCCH
Confidence 98755
No 292
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.06 E-value=0.0076 Score=53.65 Aligned_cols=74 Identities=15% Similarity=0.063 Sum_probs=41.8
Q ss_pred eEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC--c--chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--P--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
-++.++.|..+.+|++... ++ .+++|...... . ..+..|...+.....+ ..+.+++..... ++..+++||+
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~iv~~~~~~~~-~~~~~lv~e~ 81 (283)
T cd06617 5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDC--PYTVTFYGALFR-EGDVWICMEV 81 (283)
T ss_pred EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCC--CCeeeeeEEEec-CCcEEEEhhh
Confidence 4567888999999998764 33 78889775421 1 1122233322212111 234444443322 4678999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
++|
T Consensus 82 ~~~ 84 (283)
T cd06617 82 MDT 84 (283)
T ss_pred hcc
Confidence 875
No 293
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.06 E-value=0.0074 Score=54.71 Aligned_cols=90 Identities=12% Similarity=0.012 Sum_probs=51.0
Q ss_pred hHHHHHHhcCCCcceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcc
Q 020393 37 PIREWILSEGKATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPR 108 (326)
Q Consensus 37 ~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~ 108 (326)
++.+.+...-+...-...+.++.|..+.+|++... +..+++|...... ...+..|.++++.+... .+.+
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~ 79 (307)
T cd06607 3 EIAELFSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHP---NTIE 79 (307)
T ss_pred hHHHhhcCCCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCC---CEEE
Confidence 34445544323222334566888888999998763 3478888764211 12345676666665421 2233
Q ss_pred eeeecccCCCceEEEEeeecCC
Q 020393 109 PFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 109 ~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
++..... .+..+++||+++|.
T Consensus 80 ~~~~~~~-~~~~~lv~e~~~g~ 100 (307)
T cd06607 80 YKGCYLR-EHTAWLVMEYCLGS 100 (307)
T ss_pred EEEEEEe-CCeEEEEHHhhCCC
Confidence 3332222 46789999999763
No 294
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.06 E-value=0.0063 Score=54.60 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=46.6
Q ss_pred EeEeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
++.++.|..+.+|++... ++ .+.+|..... ....+..|..+++.+.. + .++..+..... .+..+++||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~-~~~~~lv~e 80 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS--R-FVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCC--C-CEeeeeeeecC-CCeEEEEEe
Confidence 456788889999998763 33 6777876431 11234457777777643 1 22333332222 357899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|..+
T Consensus 81 ~~~~~~L 87 (285)
T cd05605 81 LMNGGDL 87 (285)
T ss_pred ccCCCcH
Confidence 9998765
No 295
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.05 E-value=0.0071 Score=52.98 Aligned_cols=76 Identities=16% Similarity=0.033 Sum_probs=47.9
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.++.++.|..+.+|.+... +..+++|..... ....+..|.++++.+.. -.+.+++..... .+..+++||
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~~~e 79 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH---PNIIAYYNHFMD-DNTLLIEME 79 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC---CCeeEEEeEEec-CCeEEEEEE
Confidence 4566788888877777653 337888875421 12335567777776642 124444443322 468899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|..+
T Consensus 80 ~~~~~~L 86 (256)
T cd08221 80 YANGGTL 86 (256)
T ss_pred ecCCCcH
Confidence 9998754
No 296
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=97.05 E-value=0.0043 Score=56.24 Aligned_cols=149 Identities=20% Similarity=0.201 Sum_probs=82.4
Q ss_pred eeEeEeCCccccceEEEEe-CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393 52 TKICPVGGGCINLASRYGT-DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 119 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~ 119 (326)
..++.+++|....||+... ..| -+++|.-+-. .+.....|..+|+.|+... .+-.++...... .+.
T Consensus 14 ~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~--~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 14 EKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHAN--HIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCc--ceEEEEeeeeecccccccce
Confidence 3456688999999999765 334 5777765421 1233457888899887642 133333221111 236
Q ss_pred eEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCC
Q 020393 120 SYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 199 (326)
Q Consensus 120 ~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~ 199 (326)
-++++|+++-. +-+.+..+ +.+ ..|.+ . ..
T Consensus 92 l~lvfe~~d~D--------L~~ymd~~---~~~--~~g~~----------------~-----------~~---------- 121 (323)
T KOG0594|consen 92 LYLVFEFLDRD--------LKKYMDSL---PKK--PQGLP----------------P-----------RL---------- 121 (323)
T ss_pred EEEEEEeeccc--------HHHHHHhc---ccc--ccCCC----------------H-----------HH----------
Confidence 67888988632 11111111 100 00100 0 00
Q ss_pred hHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-c-ccCchhhh
Q 020393 200 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEAE 259 (326)
Q Consensus 200 ~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~-~~G~~~~D 259 (326)
++..+.+++..+.- + ...+++|.|++|.|+|++++|..-|+||. + .++-|.-.
T Consensus 122 --ik~~m~Qll~gl~~-~----H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~ 176 (323)
T KOG0594|consen 122 --IKSFMRQLLRGLAF-L----HSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT 176 (323)
T ss_pred --HHHHHHHHHHHHHH-H----HhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc
Confidence 01222333333321 1 35699999999999999999988999985 3 46655543
No 297
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.05 E-value=0.0081 Score=55.52 Aligned_cols=77 Identities=17% Similarity=0.146 Sum_probs=48.3
Q ss_pred EeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 54 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
.+.++.|..+.+|+.... ...+.+|...... ...+..|...+..+..+ -.+.+++......+...++
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h--~niv~~~~~~~~~~~~~~~ 89 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHH--LNVVNLLGACTKPGGPLMV 89 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccC--cchhheeeeEecCCCCEEE
Confidence 456788889999987531 1368889875321 12344577777777432 2344555443322457789
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+|+|++|.++
T Consensus 90 v~ey~~~~~L 99 (337)
T cd05054 90 IVEYCKFGNL 99 (337)
T ss_pred EEecCCCCCH
Confidence 9999999766
No 298
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.04 E-value=0.0093 Score=52.36 Aligned_cols=72 Identities=18% Similarity=0.098 Sum_probs=44.4
Q ss_pred EeCCccccceEEEEe--CC---ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 56 PVGGGCINLASRYGT--DA---GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~--~~---~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.++.|..+.+|+... .+ ..+++|...... ...+..|...++.+.. ..+.+++.... ....+++|++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~--~~~~~~v~e~ 76 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH---PCIVRLIGVCK--GEPLMLVMEL 76 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEc--CCceEEEEEe
Confidence 467788888887643 22 368889876432 1234566666666542 22444444332 3567999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 77 ~~~~~L 82 (257)
T cd05060 77 APLGPL 82 (257)
T ss_pred CCCCcH
Confidence 988654
No 299
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.04 E-value=0.0081 Score=53.14 Aligned_cols=75 Identities=24% Similarity=0.135 Sum_probs=47.5
Q ss_pred EeEeCCccccceEEEEeC-Cc----cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 54 ICPVGGGCINLASRYGTD-AG----SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~~----~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.+.++.|..+.+|+.... ++ .+.+|..... . ...+..|...++.+.. -.+.+++..... ++..+++|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv~ 84 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SRPVMIIT 84 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---cCcceEEEEECC-CCceEEEE
Confidence 455788888999998753 22 4888987542 1 2345567776666542 234444443322 46789999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
|+++|..+
T Consensus 85 e~~~~~~L 92 (269)
T cd05065 85 EFMENGAL 92 (269)
T ss_pred ecCCCCcH
Confidence 99998644
No 300
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.04 E-value=0.0031 Score=56.41 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=47.4
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
++.++.|..+.+|++... +..+++|..... . ...+..|...++.+.. -.+++++..... .+..+++|||+
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS---PYIVDFYGAFFI-EGAVYMCMEYM 81 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC---CcHHhhhhheec-CCeEEEEEeec
Confidence 345778888999998764 347888866432 1 1235567777666532 223444433222 57889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|..+
T Consensus 82 ~~~~l 86 (286)
T cd06622 82 DAGSL 86 (286)
T ss_pred CCCCH
Confidence 98754
No 301
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.03 E-value=0.0069 Score=54.36 Aligned_cols=75 Identities=11% Similarity=-0.005 Sum_probs=46.7
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.+.++.|..+.+|++... +..+++|..... . ...+..|..+++.+... .+...+..... .+..+++||
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e 80 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSR---FVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCC---CeeeeeEEEec-CCEEEEEEE
Confidence 455788889999998764 337888876431 1 12344577777766432 22333332222 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|.++
T Consensus 81 ~~~g~~L 87 (285)
T cd05630 81 LMNGGDL 87 (285)
T ss_pred ecCCCcH
Confidence 9998765
No 302
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.03 E-value=0.0083 Score=52.98 Aligned_cols=78 Identities=26% Similarity=0.154 Sum_probs=48.9
Q ss_pred eeeEeEeCCccccceEEEEeC-Cc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 51 ITKICPVGGGCINLASRYGTD-AG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~-~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
....+.++.|....+|++... ++ .+.+|...... ...+..|.+.++.+.. ..+.+++..... .+..+
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~ 82 (268)
T cd05063 7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH---HNIIRLEGVVTK-FKPAM 82 (268)
T ss_pred ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC---CCeeEEEEEEcc-CCCcE
Confidence 445667888888999998753 22 47778765421 2234556666555532 234555544332 46789
Q ss_pred EEEeeecCCCC
Q 020393 122 IIMEFIEFGSS 132 (326)
Q Consensus 122 ~v~e~l~G~~~ 132 (326)
++||+++|..+
T Consensus 83 lv~e~~~~~~L 93 (268)
T cd05063 83 IITEYMENGAL 93 (268)
T ss_pred EEEEcCCCCCH
Confidence 99999998755
No 303
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.03 E-value=0.006 Score=55.18 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=47.6
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.....++.|..+.+|++... +..+++|..... ....+..|...++.+.. -.+++++..... .+..+++||+
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~iv~e~ 99 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH---QNVVEMYKSYLV-GEELWVLMEF 99 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC---Cchhhhhhheee-CCeEEEEEec
Confidence 34556888888999998763 347888886431 12345566665555532 124444433222 4688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|..+
T Consensus 100 ~~~~~L 105 (297)
T cd06659 100 LQGGAL 105 (297)
T ss_pred CCCCCH
Confidence 998654
No 304
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.02 E-value=0.012 Score=52.39 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=49.8
Q ss_pred ceeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 50 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
+..-.+.++.|..+.+|+.... ++ .+.+|...... ...+..|+..++.+.. ..+.+++.... .+.
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~ 82 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH---PHVVRLLGICL--SSQ 82 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEe--cCc
Confidence 4455677888999999998753 22 47778765432 1234567777766632 23444554433 268
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++||+.+|.++
T Consensus 83 ~~~v~e~~~~g~L 95 (279)
T cd05057 83 VQLITQLMPLGCL 95 (279)
T ss_pred eEEEEecCCCCcH
Confidence 8999999988765
No 305
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.02 E-value=0.0078 Score=53.62 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=49.7
Q ss_pred eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.++.++.|..+.+|+.+.. ++ .+++|..... ....+..|..+++.+.. -.+++++..... .+..+++||+
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~ 79 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH---ENIVRLHDVIHT-ENKLMLVFEY 79 (284)
T ss_pred EeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC---CCEeeeeeeEee-CCcEEEEEec
Confidence 4567888888999998864 33 6888876532 12345578888887743 245666654433 4678999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
++|
T Consensus 80 ~~~ 82 (284)
T cd07836 80 MDK 82 (284)
T ss_pred CCc
Confidence 986
No 306
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.02 E-value=0.0046 Score=55.18 Aligned_cols=75 Identities=13% Similarity=0.117 Sum_probs=49.3
Q ss_pred eEeEeCCccccceEEEEeCC--ccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
-++.++.|....+|+....+ ..+++|..... . ...+..|.++++.+.. -.+++++..... ++..+++||
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e 80 (286)
T cd07846 5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH---ENLVNLIEVFRR-KKRLYLVFE 80 (286)
T ss_pred EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC---cchhhHHHhccc-CCeEEEEEe
Confidence 45678888889999988743 37888976431 1 2335567777776643 234555544332 568899999
Q ss_pred eecCCC
Q 020393 126 FIEFGS 131 (326)
Q Consensus 126 ~l~G~~ 131 (326)
|++|..
T Consensus 81 ~~~~~~ 86 (286)
T cd07846 81 FVDHTV 86 (286)
T ss_pred cCCccH
Confidence 998753
No 307
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.01 E-value=0.012 Score=53.72 Aligned_cols=75 Identities=12% Similarity=-0.021 Sum_probs=45.5
Q ss_pred eeeEeEeCCccccceEEEEeC-C-ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 51 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
...+..++.|....+|++... + ..+++|...... ...+..|.+.++.+.. -.+.+.+..... +...++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~l 102 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH---PNSIEYKGCYLR-EHTAWL 102 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCC---CCEEEEEEEEee-CCeEEE
Confidence 345667888988999998763 2 368888765321 1224456666655532 123333333222 457899
Q ss_pred EEeeecC
Q 020393 123 IMEFIEF 129 (326)
Q Consensus 123 v~e~l~G 129 (326)
+|||++|
T Consensus 103 v~e~~~g 109 (317)
T cd06635 103 VMEYCLG 109 (317)
T ss_pred EEeCCCC
Confidence 9999986
No 308
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.01 E-value=0.0034 Score=58.28 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=44.0
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCce
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS 120 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~ 120 (326)
-++.++.|..+.||++... +..+.+|..... . ...+..|..+++.+... .+.+++...... ....
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~ 97 (355)
T cd07874 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIISLLNVFTPQKSLEEFQDV 97 (355)
T ss_pred EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCC---chhceeeeeecccccccccee
Confidence 3467888999999998753 336888876431 1 12344577777666432 222333221110 2356
Q ss_pred EEEEeeecCC
Q 020393 121 YIIMEFIEFG 130 (326)
Q Consensus 121 ~~v~e~l~G~ 130 (326)
+++||+++|.
T Consensus 98 ~lv~e~~~~~ 107 (355)
T cd07874 98 YLVMELMDAN 107 (355)
T ss_pred EEEhhhhccc
Confidence 8999999763
No 309
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.01 E-value=0.019 Score=51.17 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=47.7
Q ss_pred ceeeEeEeCCccccceEEEEe-CCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 50 HITKICPVGGGCINLASRYGT-DAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~-~~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
...-++.++.|..+.+|+.+. .++ .+.+|...... ...+..|...++.+.. -.+++++.... ...
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~--~~~ 82 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS---PYVCRLLGICL--TST 82 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC---CCCceEEEEEc--CCC
Confidence 455667888999999999874 233 36788875422 1234455555544432 23455554433 346
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.++++++.+++.+
T Consensus 83 ~~l~~~~~~~g~l 95 (279)
T cd05109 83 VQLVTQLMPYGCL 95 (279)
T ss_pred cEEEEEcCCCCCH
Confidence 7899999988654
No 310
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.00 E-value=0.0057 Score=54.54 Aligned_cols=72 Identities=18% Similarity=0.200 Sum_probs=46.5
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++.++.|....+|++... +..+++|...... ...+..|.+.++.+.. -.+++++..... .+..+++||+
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~iv~~~~~~~~-~~~~~iv~e~ 79 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH---PNIVRLLDVVHS-ENKLYLVFEF 79 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC---CCccCHhheecc-CCeEEEEEec
Confidence 355788888899998753 3478889775321 2335568777777653 234555544332 4688999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
+++
T Consensus 80 ~~~ 82 (283)
T cd07835 80 LDL 82 (283)
T ss_pred cCc
Confidence 854
No 311
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=96.99 E-value=0.0076 Score=54.73 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=45.2
Q ss_pred eEeCCccccceEEEEeCC----ccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeeccc-CCCceEEEEeeec
Q 020393 55 CPVGGGCINLASRYGTDA----GSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGAL-PTGGSYIIMEFIE 128 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~----~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-~~~~~~~v~e~l~ 128 (326)
..++.|..+.||+....+ ..+++|...... ...+..|..+++.+... .+.+++..... .+...+++|++.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHP---NVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCC---CeeeEEEEEeccCCCeEEEEEeeeC
Confidence 358889999999998543 268888765422 23456788888777532 12333332211 1457799999987
Q ss_pred C
Q 020393 129 F 129 (326)
Q Consensus 129 G 129 (326)
+
T Consensus 84 ~ 84 (317)
T cd07867 84 H 84 (317)
T ss_pred C
Confidence 6
No 312
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=96.99 E-value=0.009 Score=52.30 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=43.8
Q ss_pred EeCCccccceEEEEeCCc------------cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 56 PVGGGCINLASRYGTDAG------------SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~------------~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
.++.|..+.+|+....+. .+++|...... ...+..|...++.+.. ..+.+++..... +..+
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~--~~~~ 76 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH---KHLVKLYGVCVR--DENI 76 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC---cchhheeeEEec--CCcE
Confidence 467788889998876432 25667654322 2345566666665532 234444443322 5679
Q ss_pred EEEeeecCCCC
Q 020393 122 IIMEFIEFGSS 132 (326)
Q Consensus 122 ~v~e~l~G~~~ 132 (326)
++|||++|.++
T Consensus 77 lv~e~~~~~~L 87 (259)
T cd05037 77 MVEEYVKFGPL 87 (259)
T ss_pred EEEEcCCCCcH
Confidence 99999998754
No 313
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=96.99 E-value=0.0087 Score=53.47 Aligned_cols=75 Identities=9% Similarity=-0.023 Sum_probs=42.2
Q ss_pred eCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
++.|..+.+|++... +..+.+|...... ......|...++.+.....-.++..+..... .+..+++|||++
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~~ 80 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILDLMN 80 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-CCEEEEEEecCC
Confidence 567888899988653 2368888765321 1123344444555543211122333322221 467899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|..+
T Consensus 81 g~~L 84 (278)
T cd05606 81 GGDL 84 (278)
T ss_pred CCcH
Confidence 8765
No 314
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=96.98 E-value=0.0062 Score=56.97 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=44.1
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCC----CceEE
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----GGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~----~~~~~ 122 (326)
.+.++.|..+.||++... +..+++|..... ....+..|..+++.+... .+.+++....... ...++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHD---NVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCC---CcCCHhheecCCCccccceEEE
Confidence 456888999999998753 347889976532 112345677777777532 1233332221111 25789
Q ss_pred EEeeecC
Q 020393 123 IMEFIEF 129 (326)
Q Consensus 123 v~e~l~G 129 (326)
+||++.+
T Consensus 82 v~e~~~~ 88 (372)
T cd07853 82 VTELMQS 88 (372)
T ss_pred Eeecccc
Confidence 9999865
No 315
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=96.97 E-value=0.0074 Score=53.90 Aligned_cols=78 Identities=17% Similarity=0.133 Sum_probs=49.9
Q ss_pred eeeEeEeCCccccceEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393 51 ITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 120 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 120 (326)
+.-...++.|..+.+|++... ++ .+.+|...... ...+..|.+.++.+.. -.+.+++..... .+..
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~ 82 (280)
T cd05092 7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH---QHIVRFYGVCTE-GRPL 82 (280)
T ss_pred ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC---CCCceEEEEEec-CCce
Confidence 445667888889999998642 12 46667654322 2346677777777643 234555554332 4578
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
+++||+.+|.++
T Consensus 83 ~lv~e~~~~~~L 94 (280)
T cd05092 83 LMVFEYMRHGDL 94 (280)
T ss_pred EEEEecCCCCCH
Confidence 999999998765
No 316
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=96.97 E-value=0.0046 Score=55.55 Aligned_cols=75 Identities=15% Similarity=0.082 Sum_probs=47.6
Q ss_pred EeEeCCccccceEEEEeCC------c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 54 ICPVGGGCINLASRYGTDA------G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~------~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
...++.|..+.+|++...+ + .+.+|...... ...+..|.+.++.+.. -.+.+++..... .+..+++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv 85 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH---EHIVKFYGVCGD-GDPLIMV 85 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC---CCcceEEEEEcc-CCceEEE
Confidence 3567888889999986421 1 46677765432 2345667776666543 234555554432 4678999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|.++
T Consensus 86 ~e~~~~~~L 94 (291)
T cd05094 86 FEYMKHGDL 94 (291)
T ss_pred EecCCCCcH
Confidence 999998765
No 317
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=96.97 E-value=0.011 Score=51.77 Aligned_cols=74 Identities=18% Similarity=0.081 Sum_probs=46.9
Q ss_pred eEeCCccccceEEEEeC-C-ccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 55 CPVGGGCINLASRYGTD-A-GSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
+.++.|....+|+.... + ..+++|...... ...+..|...++.+.. -.+.+++..... ....++++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~ 81 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH---PNIVQYLGTERE-EDNLYIFL 81 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC---CCchheeeeEec-CCeEEEEE
Confidence 45777888899998764 3 478888764311 1235567766666642 234445544332 46789999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|.++
T Consensus 82 e~~~~~~L 89 (258)
T cd06632 82 ELVPGGSL 89 (258)
T ss_pred EecCCCcH
Confidence 99998654
No 318
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=96.96 E-value=0.0051 Score=54.03 Aligned_cols=75 Identities=11% Similarity=0.030 Sum_probs=47.7
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.+.++.|..+.+|++... +..+++|..... ....+..|.+.++.+... .++.++..... ....++++|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e 80 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP---FLVNLWYSFQD-EENMYLVVD 80 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCC---ChHHHHHhhcC-CCeEEEEEe
Confidence 456788888999999875 347888977531 123455666666665321 23333332221 457899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|.++
T Consensus 81 ~~~~~~L 87 (258)
T cd05578 81 LLLGGDL 87 (258)
T ss_pred CCCCCCH
Confidence 9998755
No 319
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=96.96 E-value=0.0039 Score=55.32 Aligned_cols=73 Identities=11% Similarity=0.067 Sum_probs=42.7
Q ss_pred EeCCccccceEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 56 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.++.|..+.+|+....++ ..++|...... ...+..|...++.+.. -.+.+.+..... ....+++|||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~ 77 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH---PNILQCLGQCVE-AIPYLLVFEYC 77 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC---cchhheEEEecC-CCccEEEEecC
Confidence 477888889998754322 45667654321 2334455555554432 234445543322 45789999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|+++
T Consensus 78 ~~~~L 82 (268)
T cd05086 78 ELGDL 82 (268)
T ss_pred CCCcH
Confidence 98754
No 320
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.95 E-value=0.0016 Score=59.39 Aligned_cols=74 Identities=20% Similarity=0.109 Sum_probs=49.1
Q ss_pred eEeEeCCccccceEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecc---cCCC-ceEEE
Q 020393 53 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGA---LPTG-GSYII 123 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~~~~-~~~~v 123 (326)
..+-++.|....||..+..+ | .+-+|...... .+.++.|..+|+.|. .|.++.... ..++ ...++
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~------~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN------HPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC------CCCEEeeCCccccccCeeeEee
Confidence 33456788999999988754 4 56667664322 234677887776664 567776532 2133 68999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|+++
T Consensus 95 mEy~~~GsL 103 (313)
T KOG0198|consen 95 MEYAPGGSL 103 (313)
T ss_pred eeccCCCcH
Confidence 999999755
No 321
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.94 E-value=0.0039 Score=59.76 Aligned_cols=159 Identities=16% Similarity=0.155 Sum_probs=92.2
Q ss_pred CCchhHHHHHHhc-C---CCcceeeEeEeCCccccceEEEEe-CCc-cEEEEecCC---CCcchHHHHHHHHHHHHhcCC
Q 020393 33 LSDDPIREWILSE-G---KATHITKICPVGGGCINLASRYGT-DAG-SFFVKTNRS---IGPSMFEGEALGLGAMYETRT 103 (326)
Q Consensus 33 ~~~~~i~~~l~~~-~---~~~~v~~v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~ 103 (326)
++.+++...|+.. . +.......+.++.|.+..||.-.- ..+ .+.+|...- ..++.+-.|..+++-+.
T Consensus 253 ~~~~~~~~~l~~v~~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~---- 328 (550)
T KOG0578|consen 253 VSKEEILAKLKRVVSQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH---- 328 (550)
T ss_pred chHHHHHHHhheeccCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc----
Confidence 3444788777765 2 333567788899999999998643 222 445554421 12456677887776543
Q ss_pred CCCcceeeeccc--CCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHH
Q 020393 104 IRAPRPFKVGAL--PTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFY 181 (326)
Q Consensus 104 ~~vP~~~~~~~~--~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~ 181 (326)
.|-++-+-++ ..+.-|+||||++|+.+++...... . .
T Consensus 329 --H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~----------~-----------------------~------ 367 (550)
T KOG0578|consen 329 --HPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR----------M-----------------------T------ 367 (550)
T ss_pred --chHHHHHHHHhcccceeEEEEeecCCCchhhhhhccc----------c-----------------------c------
Confidence 3334433221 1467899999999986632111000 0 0
Q ss_pred HHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhh
Q 020393 182 AEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEA 258 (326)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~ 258 (326)
+.++.. .-.+.++.+. +| ...++||.|++.+|||...+|..-|.|| .|....+..
T Consensus 368 -E~qIA~----------------Icre~l~aL~-fL----H~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 368 -EGQIAA----------------ICREILQGLK-FL----HARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred -HHHHHH----------------HHHHHHHHHH-HH----HhcceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 011111 1112222222 12 2458999999999999999988889996 454444443
No 322
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=96.92 E-value=0.0036 Score=57.55 Aligned_cols=70 Identities=11% Similarity=-0.004 Sum_probs=43.5
Q ss_pred EeCCccccceEEEEeC--CccEEEEecCCCCcc-----------------hHHHHHHHHHHHHhcCCCCCcceeeecccC
Q 020393 56 PVGGGCINLASRYGTD--AGSFFVKTNRSIGPS-----------------MFEGEALGLGAMYETRTIRAPRPFKVGALP 116 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~-----------------~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~ 116 (326)
.++.|..+.+|++... +..+++|........ .+..|.++++.+... .+++++.....
T Consensus 16 ~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~- 91 (335)
T PTZ00024 16 HLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHE---NIMGLVDVYVE- 91 (335)
T ss_pred cccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCc---ceeeeeEEEec-
Confidence 3677888899998753 337888987532110 244677777766431 23334433222
Q ss_pred CCceEEEEeeecC
Q 020393 117 TGGSYIIMEFIEF 129 (326)
Q Consensus 117 ~~~~~~v~e~l~G 129 (326)
.+..+++||+++|
T Consensus 92 ~~~~~lv~e~~~~ 104 (335)
T PTZ00024 92 GDFINLVMDIMAS 104 (335)
T ss_pred CCcEEEEEecccc
Confidence 4688999999976
No 323
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=96.92 E-value=0.009 Score=53.59 Aligned_cols=76 Identities=16% Similarity=0.093 Sum_probs=48.8
Q ss_pred eEeEeCCccccceEEEEeCC------c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 53 KICPVGGGCINLASRYGTDA------G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~------~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
-...++.|..+.+|++...+ + .+++|...... ...+..|.+.++.+.. -.+++++..... .+..++
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~l 84 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH---EHIVKFYGVCVE-GDPLIM 84 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCccEE
Confidence 34557888899999987521 1 46777765422 2335667777777643 234455544332 468899
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+||+.+|..+
T Consensus 85 v~e~~~~~~L 94 (288)
T cd05093 85 VFEYMKHGDL 94 (288)
T ss_pred EEEcCCCCCH
Confidence 9999998755
No 324
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=96.91 E-value=0.0053 Score=58.34 Aligned_cols=79 Identities=15% Similarity=0.154 Sum_probs=52.1
Q ss_pred eeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 51 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
+.-.+.++.|..+.||++...+ ..+.+|...... ...+..|..++..+..+ -.+.+++..... .+.
T Consensus 39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H--~niv~~~~~~~~-~~~ 115 (401)
T cd05107 39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH--LNIVNLLGACTK-GGP 115 (401)
T ss_pred eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCC--CCeEEEEEEEcc-CCC
Confidence 3345678899999999987421 268888875421 12355688877777533 234555554433 467
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++|||++|+++
T Consensus 116 ~~iv~E~~~~g~L 128 (401)
T cd05107 116 IYIITEYCRYGDL 128 (401)
T ss_pred cEEEEeccCCCcH
Confidence 8999999999876
No 325
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=96.90 E-value=0.012 Score=52.10 Aligned_cols=76 Identities=17% Similarity=0.009 Sum_probs=45.7
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEE
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~ 122 (326)
.+.++.|..+.+|++... +..+++|...... ...+..|..+++.+... .+..++...... .+..++
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHE---RIVQYYGCLRDRAEKTLTI 83 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCC---CeeeEEEEEEcCCCCEEEE
Confidence 355778888899998753 3378888764211 12355677777777431 223333322111 356789
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
++|+++|.++
T Consensus 84 ~~e~~~~~~L 93 (266)
T cd06651 84 FMEYMPGGSV 93 (266)
T ss_pred EEeCCCCCcH
Confidence 9999998655
No 326
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=96.90 E-value=0.018 Score=51.17 Aligned_cols=78 Identities=22% Similarity=0.100 Sum_probs=48.5
Q ss_pred eeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 51 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
..-.+.++.|..+.+|+....+ ..+.+|..+... ...+..|...++.+.. ..+.+++..... .+.
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~ 83 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH---QNIVRLIGVSFE-RLP 83 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCC
Confidence 3445678888899999987643 257778765421 1224456666655532 234445543332 457
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++||+.+|.++
T Consensus 84 ~~lv~e~~~g~~L 96 (277)
T cd05036 84 RFILLELMAGGDL 96 (277)
T ss_pred cEEEEecCCCCCH
Confidence 7999999998765
No 327
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=96.90 E-value=0.012 Score=52.97 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=47.3
Q ss_pred eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
..-++.++.|..+.+|+.... +..+++|...... ...+..|...++.+.. -.+++++..... .+..|+++|
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e 96 (293)
T cd06647 21 YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH---PNIVNYLDSYLV-GDELWVVME 96 (293)
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC---CCeeehhheeee-CCcEEEEEe
Confidence 344567888888999998653 3478888865321 2334556665555532 123333322211 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|..+
T Consensus 97 ~~~~~~L 103 (293)
T cd06647 97 YLAGGSL 103 (293)
T ss_pred cCCCCcH
Confidence 9998754
No 328
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.90 E-value=0.0085 Score=56.95 Aligned_cols=136 Identities=22% Similarity=0.280 Sum_probs=81.8
Q ss_pred eeEeEeCCccccceEEEEe-CCcc-EEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 52 TKICPVGGGCINLASRYGT-DAGS-FFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~-~~~~-~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
..++.|++|+.+.||+-.. .+|+ +-+|--+-+ ..-...+|..+|+.|....-+..=.++.... .+..|+|+
T Consensus 120 eki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~--~~siYlVF 197 (560)
T KOG0600|consen 120 EKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL--SGSIYLVF 197 (560)
T ss_pred HHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC--CceEEEEE
Confidence 3567789999999999764 4454 556655432 2334568999999886532222222332221 36889999
Q ss_pred eeecCCCCCCcHHHHHHHHHHHhhc-CCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393 125 EFIEFGSSRGNQSVFGKKLAEMHKA-GKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 203 (326)
Q Consensus 125 e~l~G~~~~~~~~~lg~~La~lH~~-~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 203 (326)
||.+-. |+.|-.. ... |. ..++..++
T Consensus 198 eYMdhD------------L~GLl~~p~vk---ft-------------------------~~qIKc~m------------- 224 (560)
T KOG0600|consen 198 EYMDHD------------LSGLLSSPGVK---FT-------------------------EPQIKCYM------------- 224 (560)
T ss_pred ecccch------------hhhhhcCCCcc---cC-------------------------hHHHHHHH-------------
Confidence 999853 2222221 111 10 01233322
Q ss_pred HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
.++++.+.. .....++|.|+++.|||+|.+|..-|=||.
T Consensus 225 ---kQLl~Gl~~-----cH~~gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 225 ---KQLLEGLEY-----CHSRGVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred ---HHHHHHHHH-----HhhcCeeeccccccceEEcCCCCEEecccc
Confidence 233333321 135689999999999999999988888874
No 329
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=96.89 E-value=0.0073 Score=53.78 Aligned_cols=73 Identities=10% Similarity=0.031 Sum_probs=46.2
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
+..++.|..+.+|+.... +..+++|..... ....+..|..+++.+.. -.+.+++..... ....+++|||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~v~e~ 81 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH---PNLVNLIEVFRR-KRKLHLVFEY 81 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCC---CCEeeeeeEEee-CCEEEEEEec
Confidence 456788888999998764 337888876421 12335567777776643 123334433222 4578999999
Q ss_pred ecCC
Q 020393 127 IEFG 130 (326)
Q Consensus 127 l~G~ 130 (326)
++|.
T Consensus 82 ~~~~ 85 (286)
T cd07847 82 CDHT 85 (286)
T ss_pred cCcc
Confidence 9874
No 330
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=96.89 E-value=0.011 Score=52.76 Aligned_cols=73 Identities=18% Similarity=0.161 Sum_probs=47.0
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
.++.++.|..+.+|+.... +..+++|..... ....+..|.+.++.+.. -.+.+++..... .+..+++||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e 79 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH---PNIVKLLDVIHT-ENKLYLVFE 79 (284)
T ss_pred eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC---CCCcchhhhccc-CCcEEEEee
Confidence 4567888888999998753 347888876532 12346678888777743 224444433222 468899999
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
++.+
T Consensus 80 ~~~~ 83 (284)
T cd07860 80 FLHQ 83 (284)
T ss_pred cccc
Confidence 9864
No 331
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=96.85 E-value=0.012 Score=51.86 Aligned_cols=76 Identities=20% Similarity=0.069 Sum_probs=45.6
Q ss_pred EeEeCCccccceEEEEeCC-c-cEEEEecCCC-----C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEE
Q 020393 54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~ 122 (326)
.+.++.|..+.+|+....+ + .+++|..... . ...+..|...++.+.. -.+++.+...... ....++
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH---ERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCC---CCeeeEEeEeccCCCceEEE
Confidence 4557778888999987532 3 6888865321 1 1234567777777743 2244444432221 245789
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+||+++|.++
T Consensus 84 v~e~~~~~~L 93 (265)
T cd06652 84 FMEHMPGGSI 93 (265)
T ss_pred EEEecCCCcH
Confidence 9999998754
No 332
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=96.85 E-value=0.0078 Score=53.56 Aligned_cols=72 Identities=15% Similarity=0.090 Sum_probs=42.8
Q ss_pred eEeCCccccceEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 55 CPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
+.++.|..+.+|+....+ ..+++|..... .......|...+..+.++ ..+++++..... .+..+++||++.
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~~ 81 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEH--PNIVKLKEVFRE-NDELYFVFEYME 81 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCC--CCchhHHHHhhc-CCcEEEEEecCC
Confidence 457778888999988643 36888876532 111223455555555422 224444433322 568899999994
Q ss_pred C
Q 020393 129 F 129 (326)
Q Consensus 129 G 129 (326)
|
T Consensus 82 ~ 82 (283)
T cd07830 82 G 82 (283)
T ss_pred C
Confidence 4
No 333
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=96.85 E-value=0.011 Score=52.67 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=48.8
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++.++.|..+.+|+....+ ..+++|..... ....+..|.++++.+... .+++++..... .+..+++|||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~iv~e~ 81 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE---NIVNLKEAFRR-KGRLYLVFEY 81 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCC---CeeehhheEEE-CCEEEEEEec
Confidence 4567888888999987643 37899976531 134567788888877632 34444443322 4678999999
Q ss_pred ecCC
Q 020393 127 IEFG 130 (326)
Q Consensus 127 l~G~ 130 (326)
+++.
T Consensus 82 ~~~~ 85 (288)
T cd07833 82 VERT 85 (288)
T ss_pred CCCC
Confidence 9874
No 334
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=96.85 E-value=0.0091 Score=54.09 Aligned_cols=73 Identities=11% Similarity=0.054 Sum_probs=46.7
Q ss_pred EeEeCCccccceEEEEeCC----ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEE
Q 020393 54 ICPVGGGCINLASRYGTDA----GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~----~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~ 122 (326)
+..++.|..+.+|+..... ..|++|...... ...+..|..+++.+.. -.+.+++...... ....++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH---ENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC---CCccceEEEEeCCCCceEEE
Confidence 3458888899999998743 479999876511 2334567777776653 2234444433321 257899
Q ss_pred EEeeecC
Q 020393 123 IMEFIEF 129 (326)
Q Consensus 123 v~e~l~G 129 (326)
|||++++
T Consensus 82 v~e~~~~ 88 (316)
T cd07842 82 LFDYAEH 88 (316)
T ss_pred EEeCCCc
Confidence 9999875
No 335
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=96.84 E-value=0.019 Score=51.10 Aligned_cols=76 Identities=14% Similarity=0.056 Sum_probs=46.5
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCC----CceEE
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----GGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~----~~~~~ 122 (326)
++.++.|..+.+|++.... ..|++|..... . ...+..|...++.+....--.+.+++......+ ...++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 4567788888999998753 47999988631 1 123446777777776421123445554433211 13789
Q ss_pred EEeeecC
Q 020393 123 IMEFIEF 129 (326)
Q Consensus 123 v~e~l~G 129 (326)
+||++++
T Consensus 84 ~~e~~~~ 90 (287)
T cd07838 84 VFEHVDQ 90 (287)
T ss_pred Eehhccc
Confidence 9998865
No 336
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=96.84 E-value=0.0062 Score=53.78 Aligned_cols=73 Identities=25% Similarity=0.173 Sum_probs=44.3
Q ss_pred EeCCccccceEEEEeCC--------ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 56 PVGGGCINLASRYGTDA--------GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--------~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
.++.|..+.+|+.+..+ ..+.+|..... ....+..|...++.+.. -.+.+++..... .+..+++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v 77 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH---PNIVKLLGVCLL-NEPQYII 77 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC---CCeeeEeeeecC-CCCeEEE
Confidence 36778888899887532 25777776432 12345567766666532 123344433322 4678999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
||+++|.++
T Consensus 78 ~e~~~~~~L 86 (269)
T cd05044 78 MELMEGGDL 86 (269)
T ss_pred EeccCCCcH
Confidence 999998755
No 337
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.84 E-value=0.012 Score=53.99 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=48.6
Q ss_pred EeEeCCccccceEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393 54 ICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 120 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~---------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 120 (326)
.+.++.|..+.+|++...+ ..+.+|...... ...+..|.++++.+..+ -.+.+++..... .+..
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~~ 93 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-DGPL 93 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCC--CCeeeeeEEEcc-CCce
Confidence 4678888899999986321 147788765321 23456788888777543 124444443332 4678
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
+++|||++|.++
T Consensus 94 ~lv~e~~~~g~L 105 (334)
T cd05100 94 YVLVEYASKGNL 105 (334)
T ss_pred EEEEecCCCCcH
Confidence 999999998654
No 338
>PTZ00284 protein kinase; Provisional
Probab=96.83 E-value=0.0087 Score=57.96 Aligned_cols=77 Identities=13% Similarity=-0.038 Sum_probs=46.7
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCC---CCcceeeecccCCCceEEEEe
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTI---RAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~---~vP~~~~~~~~~~~~~~~v~e 125 (326)
-++.++.|..+.||+.... +..+.+|+.... .......|.++++.+...... .+..++.......+..+++|+
T Consensus 133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~ 212 (467)
T PTZ00284 133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMP 212 (467)
T ss_pred EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEe
Confidence 3566899999999998763 236888987532 122345678888777653211 244444433222356788888
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
+..|
T Consensus 213 ~~g~ 216 (467)
T PTZ00284 213 KYGP 216 (467)
T ss_pred ccCC
Confidence 7633
No 339
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=96.82 E-value=0.016 Score=51.87 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=44.0
Q ss_pred eEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 55 CPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
+.++.|..+.+|+..... ..+.+|...... ...+..|...++.+.. -.+.+++..... .+..+++
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv 81 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH---PHVIKLYGACSQ-DGPLLLI 81 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCCcEEE
Confidence 456778888999976421 246667664321 1235567766665532 123344433222 5678999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
+||.+|..+
T Consensus 82 ~e~~~~~~L 90 (290)
T cd05045 82 VEYAKYGSL 90 (290)
T ss_pred EEecCCCCH
Confidence 999998755
No 340
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=96.82 E-value=0.0073 Score=53.86 Aligned_cols=72 Identities=15% Similarity=0.081 Sum_probs=44.9
Q ss_pred EeEeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
++.++.|..+.+|++... +| .+++|..+.. ....+..|.+.++.+... .+.+++..... .+..++++|+
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~ 80 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK---NIVRLYDVLHS-DKKLTLVFEY 80 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCC---CeeeHHHHhcc-CCceEEEEec
Confidence 456788888999998763 33 6788876431 123355688777766431 23333332222 4678999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
++|
T Consensus 81 ~~~ 83 (284)
T cd07839 81 CDQ 83 (284)
T ss_pred CCC
Confidence 875
No 341
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=96.81 E-value=0.012 Score=51.87 Aligned_cols=75 Identities=16% Similarity=0.041 Sum_probs=44.9
Q ss_pred eEeCCccccceEEEEeCC-----ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393 55 CPVGGGCINLASRYGTDA-----GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 119 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~-----~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~ 119 (326)
+.++.|..+.+|+..... ..+++|...... ...+..|...++.+.. -.+.+++...... ...
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH---PNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEeeeccCCccccCcc
Confidence 456788889999987532 258888765321 1234566666665532 2344454432211 124
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++|+|+++.++
T Consensus 82 ~~~v~e~~~~~~l 94 (273)
T cd05035 82 PMVILPFMKHGDL 94 (273)
T ss_pred cEEEEeccCCCCH
Confidence 7999999998754
No 342
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=96.80 E-value=0.012 Score=53.42 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=45.5
Q ss_pred eEeCCccccceEEEEeCC----ccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEeeec
Q 020393 55 CPVGGGCINLASRYGTDA----GSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIE 128 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~----~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~l~ 128 (326)
..++.|..+.||+....+ ..+++|...... ......|..+++.+... .+.+++...... +...+++|++.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHP---NVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCC---CCcceeeeEecCCCcEEEEEEeccC
Confidence 457889999999987532 368888875432 23356788888887542 233333322111 346789999987
Q ss_pred C
Q 020393 129 F 129 (326)
Q Consensus 129 G 129 (326)
+
T Consensus 84 ~ 84 (317)
T cd07868 84 H 84 (317)
T ss_pred C
Confidence 5
No 343
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=96.80 E-value=0.004 Score=55.10 Aligned_cols=77 Identities=16% Similarity=0.081 Sum_probs=47.0
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeeccc---C--CCceEEEE
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---P--TGGSYIIM 124 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~--~~~~~~v~ 124 (326)
.+.++.|..+.+|+.... +..+++|..... ....+..|...+..+..+ -.+.+.+..... + +...|++|
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~ 88 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH--RNIATYYGAFIKKNPPGMDDQLWLVM 88 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCC--CCeeeEeeEEeecCCCCCCcEEEEEE
Confidence 345777888899988653 236888887542 223456777777776543 223344432211 1 23578999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
|+++|..+
T Consensus 89 e~~~~~~L 96 (272)
T cd06637 89 EFCGAGSV 96 (272)
T ss_pred EcCCCCcH
Confidence 99988655
No 344
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=96.79 E-value=0.0066 Score=54.12 Aligned_cols=77 Identities=14% Similarity=0.031 Sum_probs=47.6
Q ss_pred EeEeCCccccceEEEEeC-C-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeeccc-----CCCceEEEE
Q 020393 54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-----PTGGSYIIM 124 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-----~~~~~~~v~ 124 (326)
++.++.|..+.+|+.... . ..+++|..... ....+..|..+++.+..+ -.+.+.+..... .....+++|
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~ 98 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH--RNIATYYGAFIKKSPPGHDDQLWLVM 98 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCC--CcEEEEeeehhcccccCCCCEEEEEE
Confidence 456788888999998763 2 36888887542 223455677766666433 123444433211 024679999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
||++|..+
T Consensus 99 e~~~~~~L 106 (282)
T cd06636 99 EFCGAGSV 106 (282)
T ss_pred EeCCCCcH
Confidence 99998655
No 345
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=96.78 E-value=0.013 Score=52.08 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=46.1
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e 125 (326)
++.++.|..+.+|++...+ ..+++|...... ...+..|..+++.+... .+.+++...... .+..+++|+
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHP---NIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCC---CeeeheeeEecCCCCcEEEEec
Confidence 4567888889999997653 378888876421 12355677777777521 233333332221 268899999
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
+.++
T Consensus 81 ~~~~ 84 (287)
T cd07840 81 YMDH 84 (287)
T ss_pred cccc
Confidence 9975
No 346
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=96.78 E-value=0.0084 Score=52.42 Aligned_cols=75 Identities=17% Similarity=0.142 Sum_probs=49.1
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.+.++.|....+|++.... ..+++|..... ....+..|...++.+.. ..+++++..... .+..++++|+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e~ 80 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH---PNIVTFFASFQE-NGRLFIVMEY 80 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCC---CChhhhhheecc-CCeEEEEEec
Confidence 4567788888999987643 47888886431 23445678877777753 224444433222 4688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|..+
T Consensus 81 ~~~~~L 86 (257)
T cd08225 81 CDGGDL 86 (257)
T ss_pred CCCCcH
Confidence 988654
No 347
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=96.78 E-value=0.0067 Score=54.45 Aligned_cols=75 Identities=21% Similarity=0.179 Sum_probs=47.2
Q ss_pred EeEeCCccccceEEEEeCC------------------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceee
Q 020393 54 ICPVGGGCINLASRYGTDA------------------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFK 111 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~------------------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~ 111 (326)
++.++.|..+.+|+++..+ ..+++|...... ...+..|.++++.+.. -.+.+++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~ 86 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSD---PNIARLLG 86 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCC---CCEeEEEE
Confidence 4667788888888876532 136778765421 2345567777777753 22444444
Q ss_pred ecccCCCceEEEEeeecCCCC
Q 020393 112 VGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 112 ~~~~~~~~~~~v~e~l~G~~~ 132 (326)
.... ++..+++||+++|.++
T Consensus 87 ~~~~-~~~~~lv~e~~~~~~L 106 (296)
T cd05051 87 VCTV-DPPLCMIMEYMENGDL 106 (296)
T ss_pred EEec-CCCcEEEEecCCCCCH
Confidence 3322 4688999999998654
No 348
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=96.75 E-value=0.016 Score=51.05 Aligned_cols=76 Identities=17% Similarity=0.040 Sum_probs=46.5
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC-----C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEE
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~ 122 (326)
.+.++.|..+.+|+.... ...+.+|..... . ...+..|.++++.+... .+.+++...... .+..++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHD---RIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCC---CcceEEEEEEcCCCCEEEE
Confidence 345777888899998753 237888875321 1 12355677777777532 234444432221 346789
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
++|+.+|..+
T Consensus 84 v~e~~~~~~L 93 (264)
T cd06653 84 FVEYMPGGSI 93 (264)
T ss_pred EEEeCCCCcH
Confidence 9999988654
No 349
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.75 E-value=0.017 Score=50.89 Aligned_cols=74 Identities=15% Similarity=0.026 Sum_probs=44.7
Q ss_pred eEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
+.++.|..+.+|++... +..+++|...... ...+..|...++.+.. -.+.+.+..... .+..+++||+++|
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~~~ 90 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH---SNIVAYFGSYLR-RDKLWICMEFCGG 90 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC---CCeeeEEEEEEe-CCEEEEEEeccCC
Confidence 44677888889998753 3378888765422 2234556666555532 123333332222 4688999999998
Q ss_pred CCC
Q 020393 130 GSS 132 (326)
Q Consensus 130 ~~~ 132 (326)
..+
T Consensus 91 ~~L 93 (267)
T cd06645 91 GSL 93 (267)
T ss_pred CcH
Confidence 765
No 350
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=96.75 E-value=0.028 Score=49.23 Aligned_cols=72 Identities=22% Similarity=0.194 Sum_probs=45.8
Q ss_pred EeCCccccceEEEEeCC--c---cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 56 PVGGGCINLASRYGTDA--G---SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--~---~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.++.|..+.+|++...+ + .+++|..+.... ..+..|...++.+... .+.+++.... +...+++||+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~--~~~~~~v~e~ 76 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHE---NLIRLYGVVL--THPLMMVTEL 76 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCC---CccceeEEEc--CCeEEEEEEe
Confidence 46778889999987532 2 478898865322 2345677766666432 2334443332 2678999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
.+|.++
T Consensus 77 ~~~~~L 82 (257)
T cd05040 77 APLGSL 82 (257)
T ss_pred cCCCcH
Confidence 998754
No 351
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.75 E-value=0.015 Score=56.37 Aligned_cols=130 Identities=20% Similarity=0.197 Sum_probs=83.5
Q ss_pred eCCccccceEEEEe-CCc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 57 VGGGCINLASRYGT-DAG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 57 l~~G~~n~~y~v~~-~~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
+|.|.+..+|+++. +.| .|-+|+-+. ..++.+..|.++.+.|... .|-+.+..-++ ...-|++.|.++
T Consensus 26 LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~Hp---nIV~f~~~FED-s~nVYivLELC~ 101 (592)
T KOG0575|consen 26 LGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHP---NIVQFYHFFED-SNNVYIVLELCH 101 (592)
T ss_pred eccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCC---cEEeeeeEeec-CCceEEEEEecC
Confidence 67889999999987 555 677788764 2456788899998888642 24444443332 468899999987
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHH
Q 020393 129 FGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR 208 (326)
Q Consensus 129 G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 208 (326)
-.. |.++|+...+. .+.-..++. .+
T Consensus 102 ~~s-----------L~el~Krrk~l--------------------tEpEary~l------------------------~Q 126 (592)
T KOG0575|consen 102 RGS-----------LMELLKRRKPL--------------------TEPEARYFL------------------------RQ 126 (592)
T ss_pred Ccc-----------HHHHHHhcCCC--------------------CcHHHHHHH------------------------HH
Confidence 542 66777744321 011111111 22
Q ss_pred HHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 209 LMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 209 l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
++..+. ++ ...++||.||+.||++++++-.+-|=||.
T Consensus 127 Iv~Glk-YL----H~~~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 127 IVEGLK-YL----HSLGIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred HHHHHH-HH----HhcCceecccchhheeecCcCcEEecccc
Confidence 222222 22 23479999999999999887668888874
No 352
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=96.74 E-value=0.026 Score=49.85 Aligned_cols=73 Identities=15% Similarity=0.057 Sum_probs=41.8
Q ss_pred EeCCccccceEEEEeCC--------------ccEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393 56 PVGGGCINLASRYGTDA--------------GSFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 118 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~--------------~~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 118 (326)
.++.|..+.+|+-+... -.+++|....... ..+..|...++.+.. -.+.+++..... ..
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h---p~iv~~~~~~~~-~~ 77 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH---KHIVLLYGVCVR-DV 77 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CC
Confidence 46777888888875321 1467787654222 233445555544432 234445544332 45
Q ss_pred ceEEEEeeecCCCC
Q 020393 119 GSYIIMEFIEFGSS 132 (326)
Q Consensus 119 ~~~~v~e~l~G~~~ 132 (326)
..+++||+++|..+
T Consensus 78 ~~~lv~e~~~~~~l 91 (262)
T cd05077 78 ENIMVEEFVEFGPL 91 (262)
T ss_pred CCEEEEecccCCCH
Confidence 78999999998754
No 353
>PHA02988 hypothetical protein; Provisional
Probab=96.74 E-value=0.019 Score=51.49 Aligned_cols=75 Identities=11% Similarity=0.007 Sum_probs=50.7
Q ss_pred eEeCCccccceEEEEeCCccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeeccc--C-CCceEEEEe
Q 020393 55 CPVGGGCINLASRYGTDAGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIME 125 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~-~~~~~~v~e 125 (326)
..+++|....+|+-..++..+++|...... ...+..|..++..+.. + .+.+++..... . ....+++||
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~-nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDS--N-NILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCC--C-CEEEEeeeEEecccCCCceEEEEE
Confidence 446677778899988877789999876421 1345578888887753 2 45555544221 1 246789999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
|++|+.+
T Consensus 103 y~~~g~L 109 (283)
T PHA02988 103 YCTRGYL 109 (283)
T ss_pred eCCCCcH
Confidence 9999765
No 354
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=96.73 E-value=0.015 Score=53.93 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=45.7
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 119 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~ 119 (326)
..++.++.|..+.+|++... +..+++|..... . ...+..|..+++.+... .+.+++...... ...
T Consensus 19 ~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 19 QNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHK---NIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred EEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCC---CCcceeeeeccCCCccccCc
Confidence 44677888999999998763 347899986431 1 12344577777766432 233444321110 135
Q ss_pred eEEEEeeecC
Q 020393 120 SYIIMEFIEF 129 (326)
Q Consensus 120 ~~~v~e~l~G 129 (326)
.+++||+++|
T Consensus 96 ~~lv~e~~~~ 105 (353)
T cd07850 96 VYLVMELMDA 105 (353)
T ss_pred EEEEEeccCC
Confidence 7999999875
No 355
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=96.72 E-value=0.034 Score=49.55 Aligned_cols=27 Identities=22% Similarity=0.175 Sum_probs=23.4
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||++++++..-++|+.
T Consensus 128 ~~iiH~dlkp~nili~~~~~~kl~Dfg 154 (279)
T cd05111 128 HRMVHRNLAARNILLKSDSIVQIADFG 154 (279)
T ss_pred CCEeccccCcceEEEcCCCcEEEcCCc
Confidence 358999999999999988777889963
No 356
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=96.71 E-value=0.01 Score=53.45 Aligned_cols=75 Identities=13% Similarity=0.146 Sum_probs=44.9
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
...++.|..+.+|++... +..+++|...... ...+..|...++.+.. ..+..++..... .+..+++||+++
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~~ 102 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH---ENVVDMYNSYLV-GDELWVVMEFLE 102 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC---CcHHHHHHheec-CCeEEEEEeCCC
Confidence 355778888899998753 3478888764321 2334566666665532 123333322211 467899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|..+
T Consensus 103 ~~~L 106 (292)
T cd06658 103 GGAL 106 (292)
T ss_pred CCcH
Confidence 8654
No 357
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=96.71 E-value=0.046 Score=48.28 Aligned_cols=76 Identities=18% Similarity=0.071 Sum_probs=47.4
Q ss_pred eeEeEeCCccccceEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 52 TKICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~-----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
+-.+.++.|..+.+|+....+ ..+++|...... ...+..|...++.+.. -.+.+.+.... ++..++
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~--~~~~~l 83 (270)
T cd05056 9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH---PHIVKLIGVIT--ENPVWI 83 (270)
T ss_pred eeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CchhceeEEEc--CCCcEE
Confidence 334667888888999976432 257888876432 2345567777666642 23444443322 356789
Q ss_pred EEeeecCCCC
Q 020393 123 IMEFIEFGSS 132 (326)
Q Consensus 123 v~e~l~G~~~ 132 (326)
+||+++|.++
T Consensus 84 v~e~~~~~~L 93 (270)
T cd05056 84 VMELAPLGEL 93 (270)
T ss_pred EEEcCCCCcH
Confidence 9999987655
No 358
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=96.71 E-value=0.016 Score=52.10 Aligned_cols=73 Identities=19% Similarity=0.195 Sum_probs=48.7
Q ss_pred eEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
-.+.++.|..+.+|++... ++ .+++|...... ...+..|.+.++.+.. -.+++++..... .+..+++||
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e 81 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH---GNIVRLQDVVHS-EKRLYLVFE 81 (294)
T ss_pred EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC---CCEeeEEEEEec-CCeEEEEEe
Confidence 3466788888999998754 33 78999875321 2345678887777743 235556654433 468999999
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
|+++
T Consensus 82 ~~~~ 85 (294)
T PLN00009 82 YLDL 85 (294)
T ss_pred cccc
Confidence 9864
No 359
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=96.70 E-value=0.013 Score=53.20 Aligned_cols=75 Identities=17% Similarity=0.112 Sum_probs=46.0
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII 123 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v 123 (326)
..++.++.|....+|+.... +..+++|...... ......|..+++.+... .+.+++..-... .+..+++
T Consensus 10 ~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 10 EKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHP---NIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred eEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCC---CCcceEEEEecCCCCeEEEE
Confidence 34556788888999998763 3368888765311 12244688888777542 233344332111 2467999
Q ss_pred EeeecC
Q 020393 124 MEFIEF 129 (326)
Q Consensus 124 ~e~l~G 129 (326)
||+.++
T Consensus 87 ~e~~~~ 92 (309)
T cd07845 87 MEYCEQ 92 (309)
T ss_pred EecCCC
Confidence 999875
No 360
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=96.69 E-value=0.018 Score=50.23 Aligned_cols=76 Identities=16% Similarity=0.078 Sum_probs=48.3
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
-++.++.|..+.+|++... ...+++|..... ....+..|.+.++.+.. -.+.+++..... ++..+++||
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH---PNIIEYYENFLE-DKALMIVME 79 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC---CchhheeeeEec-CCEEEEEEe
Confidence 3566788888899987653 347888876432 12345667777776642 123334432221 467899999
Q ss_pred eecCCCC
Q 020393 126 FIEFGSS 132 (326)
Q Consensus 126 ~l~G~~~ 132 (326)
+++|..+
T Consensus 80 ~~~~~~L 86 (256)
T cd08220 80 YAPGGTL 86 (256)
T ss_pred cCCCCCH
Confidence 9998755
No 361
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=96.67 E-value=0.0086 Score=55.26 Aligned_cols=27 Identities=30% Similarity=0.424 Sum_probs=24.1
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||+++.++...|+|+.
T Consensus 137 ~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 137 AGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred CCeecccCChhhEEECCCCCEEEcCCc
Confidence 479999999999999988888899974
No 362
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=96.67 E-value=0.0074 Score=53.22 Aligned_cols=74 Identities=14% Similarity=0.044 Sum_probs=46.2
Q ss_pred eEeCCccccceEEEEe--CCccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 55 CPVGGGCINLASRYGT--DAGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
+.++.|..+.+|+... ++..+++|..... ....+..|...++.+.. -.+++++..... .+..+++||+
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~v~e~ 83 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNVIKYYASFIE-DNELNIVLEL 83 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC---CchhhhhheeEe-CCeEEEEEEe
Confidence 4467788888999885 3347889865421 11234567776666642 224444443322 4688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 84 ~~~~~L 89 (267)
T cd08229 84 ADAGDL 89 (267)
T ss_pred cCCCCH
Confidence 998755
No 363
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=96.66 E-value=0.017 Score=51.34 Aligned_cols=74 Identities=14% Similarity=0.112 Sum_probs=45.3
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC--Cc--chHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GP--SMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~ 126 (326)
++.++.|..+.+|++... +..+++|..... +. .....|...+..+.++ -.+++++...... .+..+++|||
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPH--PNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCC--CCccceEEEEecCCCCcEEEEEec
Confidence 456788888999999763 336888876532 11 1122466666655433 2355555543331 2678999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
.+|
T Consensus 82 ~~~ 84 (282)
T cd07831 82 MDM 84 (282)
T ss_pred CCc
Confidence 975
No 364
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.65 E-value=0.043 Score=47.77 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=57.5
Q ss_pred CcceeeEeEeCCccccceEEEE-eCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 48 ATHITKICPVGGGCINLASRYG-TDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 48 ~~~v~~v~~l~~G~~n~~y~v~-~~~~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
+.+..-+++++.|.....|.-. ..+| ++.+|.-+.. ....+..|..+.+.|.. ++-.|.+...+.. .....+||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~--g~GiP~i~~y~~e-~~ynvlVM 90 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQG--GVGIPHIRHYGTE-KDYNVLVM 90 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhcc--CCCCchhhhhccc-cccceeee
Confidence 3367778999999999999853 3444 7889998753 23456789999999975 5667888877643 45778998
Q ss_pred eeec
Q 020393 125 EFIE 128 (326)
Q Consensus 125 e~l~ 128 (326)
+-+.
T Consensus 91 dLLG 94 (341)
T KOG1163|consen 91 DLLG 94 (341)
T ss_pred eccC
Confidence 8663
No 365
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=96.63 E-value=0.013 Score=54.18 Aligned_cols=74 Identities=16% Similarity=0.092 Sum_probs=44.1
Q ss_pred eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeeccc---CC--C
Q 020393 51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PT--G 118 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~~--~ 118 (326)
-..+..++.|..+.+|++... ++ .+++|..... . ...+..|.+.++.+.... +.+++..... .. .
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~---iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHEN---VIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred eEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCC---ccceeeeecCCccccccc
Confidence 445678899999999998753 33 7888876421 1 123456888777775321 2233322111 01 2
Q ss_pred ceEEEEeee
Q 020393 119 GSYIIMEFI 127 (326)
Q Consensus 119 ~~~~v~e~l 127 (326)
..+++|+++
T Consensus 94 ~~~lv~e~~ 102 (343)
T cd07880 94 DFYLVMPFM 102 (343)
T ss_pred eEEEEEecC
Confidence 458999988
No 366
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=96.62 E-value=0.014 Score=56.89 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=27.1
Q ss_pred CcceeecCCCCCCeeecCCC--CeEEEccc--cccCchhh
Q 020393 223 EPCLLHGDLWSGNISSDKNG--EPVILDPA--CYYGHNEA 258 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~--~~~iID~~--~~~G~~~~ 258 (326)
...|||+||+|.|||+-+-+ ..-||||. |+.+...+
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy 346 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY 346 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence 45899999999999996543 35799984 45666555
No 367
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=96.62 E-value=0.013 Score=52.66 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=44.5
Q ss_pred eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
..-++.++.|..+.+|++... +..+++|...... ...+..|...+..+..+ -.+++++..... .+..+++|
T Consensus 17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~v~ 93 (296)
T cd06618 17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDC--PYIVKCYGYFIT-DSDVFICM 93 (296)
T ss_pred heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCC--CchHhhheeeec-CCeEEEEe
Confidence 344667888889999999876 3478888875321 11122344333333222 234455544322 46789999
Q ss_pred eeecC
Q 020393 125 EFIEF 129 (326)
Q Consensus 125 e~l~G 129 (326)
|++++
T Consensus 94 e~~~~ 98 (296)
T cd06618 94 ELMST 98 (296)
T ss_pred eccCc
Confidence 98754
No 368
>PTZ00036 glycogen synthase kinase; Provisional
Probab=96.62 E-value=0.016 Score=55.66 Aligned_cols=75 Identities=13% Similarity=-0.001 Sum_probs=45.7
Q ss_pred eeeEeEeCCccccceEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceee---ecccC--C--CceE
Q 020393 51 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFK---VGALP--T--GGSY 121 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~---~~~~~--~--~~~~ 121 (326)
-.-.+.++.|..+.||+.... . ..+.+|..... ......|..+++.+... .+.+++. ..... . ...+
T Consensus 68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-~~~~~~Ei~il~~l~h~---niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-PQYKNRELLIMKNLNHI---NIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHhcCCC---CCcceeeeEeecccccCCCceEEE
Confidence 445667888999999998763 2 36888876432 23345688888877532 2333322 11111 1 2356
Q ss_pred EEEeeecC
Q 020393 122 IIMEFIEF 129 (326)
Q Consensus 122 ~v~e~l~G 129 (326)
++|||++|
T Consensus 144 lvmE~~~~ 151 (440)
T PTZ00036 144 VVMEFIPQ 151 (440)
T ss_pred EEEecCCc
Confidence 89999986
No 369
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=96.57 E-value=0.044 Score=48.42 Aligned_cols=75 Identities=21% Similarity=0.124 Sum_probs=46.5
Q ss_pred EeEeCCccccceEEEEeC----Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 54 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~----~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.+.++.|....||+.... .+ .+.+|..... . ...+..|...++.+.. -.+++++..... .+..+++|
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~ 85 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH---SNIVRLEGVITR-GNTMMIVT 85 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEec-CCCcEEEE
Confidence 455788889999987542 12 5667776532 1 1234556666655532 235555554332 46889999
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
|+++|..+
T Consensus 86 e~~~~~~L 93 (266)
T cd05064 86 EYMSNGAL 93 (266)
T ss_pred EeCCCCcH
Confidence 99998755
No 370
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=96.56 E-value=0.026 Score=50.46 Aligned_cols=73 Identities=14% Similarity=0.096 Sum_probs=45.2
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.+.++.|..+.+|++... +..+.+|...... ...+..|...+..+..+ -.+++++..... ++..+++|+++
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~~~~~~~~-~~~~~~~~e~~ 85 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDC--PYIVKFYGALFR-EGDCWICMELM 85 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCC--CCEeeeeeEEec-CCcEEEEEecc
Confidence 345777888899998763 2368888765321 22345666666655432 235555554332 56789999987
Q ss_pred cC
Q 020393 128 EF 129 (326)
Q Consensus 128 ~G 129 (326)
++
T Consensus 86 ~~ 87 (288)
T cd06616 86 DI 87 (288)
T ss_pred cC
Confidence 64
No 371
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.56 E-value=0.0045 Score=55.73 Aligned_cols=65 Identities=14% Similarity=0.028 Sum_probs=43.9
Q ss_pred cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcC
Q 020393 74 SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAG 150 (326)
Q Consensus 74 ~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~ 150 (326)
+|.||+-.. ..+..+-.|++.+..-..+ ..+-+++.+-.+ +...|+|||.+.|+++ |..||...
T Consensus 105 EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh--~nilqLiefFEd-d~~FYLVfEKm~GGpl----------LshI~~~~ 171 (463)
T KOG0607|consen 105 EYAVKIIDKQPGHSRSRVFREVETFYQCQGH--KNILQLIEFFED-DTRFYLVFEKMRGGPL----------LSHIQKRK 171 (463)
T ss_pred hhhhhhhhcCCchHHHHHHHHHHHHHHhcCC--ccHHHHHHHhcc-cceEEEEEecccCchH----------HHHHHHhh
Confidence 677777543 3455566788877665544 334455544332 5799999999999887 88888766
Q ss_pred C
Q 020393 151 K 151 (326)
Q Consensus 151 ~ 151 (326)
.
T Consensus 172 ~ 172 (463)
T KOG0607|consen 172 H 172 (463)
T ss_pred h
Confidence 4
No 372
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=96.56 E-value=0.046 Score=48.22 Aligned_cols=74 Identities=14% Similarity=-0.002 Sum_probs=47.8
Q ss_pred eEeCCccccceEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 55 CPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
..++.|....+|+....+ + .+++|...... ...+..|...++.+.. ..+.+++..... .+..++++|+++|
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~~ 89 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH---RNIVQYLGSDSE-NGFFKIFMEQVPG 89 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC---CCeeeeeeeecc-CCEEEEEEecCCC
Confidence 457888889999997543 3 68888765422 2345667777766643 223444444332 4688999999998
Q ss_pred CCC
Q 020393 130 GSS 132 (326)
Q Consensus 130 ~~~ 132 (326)
.++
T Consensus 90 ~~L 92 (268)
T cd06624 90 GSL 92 (268)
T ss_pred CCH
Confidence 755
No 373
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=96.56 E-value=0.025 Score=50.38 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=30.6
Q ss_pred cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 74 SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 74 ~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
.+++|....... ..+..|+.+++.+.. ..+++++..... .+..++||||++|.++
T Consensus 46 ~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h---~niv~~~~~~~~-~~~~~lv~ey~~~g~L 103 (274)
T cd05076 46 RVVLKVLDPSHRDIALAFFETASLMSQVSH---IHLAFVHGVCVR-GSENIMVEEFVEHGPL 103 (274)
T ss_pred eEEEEecChHHHHHHHHHHHHHHHHhcCCC---CCeeeEEEEEEe-CCceEEEEecCCCCcH
Confidence 366777653211 123344444443332 235556655432 4688999999998754
No 374
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=96.55 E-value=0.016 Score=53.24 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=43.9
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.+.++.|....+|++... +..|++|..... ....+..|..+++.+....-+.+...+.......+..+++|+|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 89 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL 89 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence 456788888899998764 347888876432 1223456777777775321112222222211113467999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
+.|
T Consensus 90 ~~~ 92 (334)
T cd07855 90 MES 92 (334)
T ss_pred hhh
Confidence 865
No 375
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=96.54 E-value=0.02 Score=55.93 Aligned_cols=27 Identities=30% Similarity=0.246 Sum_probs=24.1
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.|||++.++...|+|+.
T Consensus 162 ~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 162 KHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred CCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 479999999999999988888899974
No 376
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=96.54 E-value=0.011 Score=54.08 Aligned_cols=72 Identities=13% Similarity=0.118 Sum_probs=42.9
Q ss_pred eCCc--cccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 57 VGGG--CINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 57 l~~G--~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
++.| ....+|++... ++ .+.+|...... ...+..|..+++.+.. -.+.+++..... ++..++|||++
T Consensus 6 ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e~~ 81 (327)
T cd08227 6 IGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH---PNIVPYRATFIA-DNELWVVTSFM 81 (327)
T ss_pred ccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEE-CCEEEEEEecc
Confidence 4555 45678887653 34 57778765321 1335567777766642 234444443322 56889999999
Q ss_pred cCCCC
Q 020393 128 EFGSS 132 (326)
Q Consensus 128 ~G~~~ 132 (326)
+|.++
T Consensus 82 ~~~~l 86 (327)
T cd08227 82 AYGSA 86 (327)
T ss_pred CCCcH
Confidence 98654
No 377
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=96.52 E-value=0.018 Score=51.92 Aligned_cols=75 Identities=13% Similarity=0.144 Sum_probs=47.1
Q ss_pred EeEeCCccccceEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393 54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 128 (326)
...++.|..+.+|+.... + ..+++|..... ....+..|...++.+.. -.+++++..... .+..+++||+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~ 100 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH---ENVVEMYNSYLV-GDELWVVMEFLE 100 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC---cchhheeeEEEe-CCEEEEEEecCC
Confidence 355778888899988763 3 36888876431 12335567776666643 234444433222 468899999999
Q ss_pred CCCC
Q 020393 129 FGSS 132 (326)
Q Consensus 129 G~~~ 132 (326)
|..+
T Consensus 101 ~~~L 104 (292)
T cd06657 101 GGAL 104 (292)
T ss_pred CCcH
Confidence 8754
No 378
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=96.52 E-value=0.018 Score=51.29 Aligned_cols=74 Identities=11% Similarity=0.004 Sum_probs=43.2
Q ss_pred eEeCCccccceEEEEeC-------CccEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 55 CPVGGGCINLASRYGTD-------AGSFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
+.++.|..+.+|+.... ...+.+|....... ..+..|..++..+.. -.+.+++..... .+..+++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~~~ 86 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH---PNIVCLLGVVTK-EQPLSMI 86 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEcC-CCceEEE
Confidence 34566777888887642 12588888764321 234456655554432 124444443332 4578899
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
++|.++..+
T Consensus 87 ~e~~~~~~l 95 (283)
T cd05091 87 FSYCSHSDL 95 (283)
T ss_pred EEcCCCCcH
Confidence 999987653
No 379
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=96.48 E-value=0.018 Score=50.06 Aligned_cols=27 Identities=22% Similarity=0.171 Sum_probs=23.7
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||+++.++...++|+.
T Consensus 104 ~~i~H~dlkp~Nil~~~~~~~~l~df~ 130 (237)
T cd05576 104 EGIVCRDLNPNNILLDDRGHIQLTYFS 130 (237)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEeccc
Confidence 479999999999999988878889863
No 380
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.47 E-value=0.023 Score=53.38 Aligned_cols=145 Identities=21% Similarity=0.119 Sum_probs=85.0
Q ss_pred ceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHH--HhcCCCCCcceeeecccCC---CceEEEE
Q 020393 50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAM--YETRTIRAPRPFKVGALPT---GGSYIIM 124 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L--~~~~~~~vP~~~~~~~~~~---~~~~~v~ 124 (326)
+|+=++.+|-|-...|||-...++.+-||++...++....+|.++++.. +.. .+=..+++|.... .+-|+|.
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHE---NILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHE---NILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred eeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccc---hhhhhhhccccCCCceEEEEEee
Confidence 4556677899999999999888889999999865555566788877754 221 1222333333212 2568888
Q ss_pred eeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 020393 125 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ 204 (326)
Q Consensus 125 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~ 204 (326)
+|=+.+++ +..... +. .+ ....++.+. .
T Consensus 289 dYHe~GSL--------------~DyL~r---------~t-----------v~---------~~~ml~Lal---------S 316 (513)
T KOG2052|consen 289 DYHEHGSL--------------YDYLNR---------NT-----------VT---------TEGMLKLAL---------S 316 (513)
T ss_pred ecccCCcH--------------HHHHhh---------cc-----------CC---------HHHHHHHHH---------H
Confidence 88765433 222110 00 00 000011110 0
Q ss_pred HHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 205 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 205 ~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
.+.-+....-+++.. +.+|.+-|.||+..||||..++...|=|..
T Consensus 317 ~AsGLaHLH~eI~GT-qgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 317 IASGLAHLHMEIVGT-QGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred HhhhHHHHHHHHhcC-CCCchhhccccccccEEEccCCcEEEeece
Confidence 111122222233332 578999999999999999988877787753
No 381
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=96.47 E-value=0.052 Score=55.03 Aligned_cols=74 Identities=16% Similarity=0.075 Sum_probs=52.5
Q ss_pred EeCCccccceEEEEe-CCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEEEEeee
Q 020393 56 PVGGGCINLASRYGT-DAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIMEFI 127 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~-~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v~e~l 127 (326)
.++.|....+|++.- .++ ...+||-..+ ..+.++.|+++|+.+..+ -.+++.+++.... +++-|+|||++
T Consensus 26 vig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h--pnv~~fyg~~~k~~~~~~DqLWLVMEfC 103 (953)
T KOG0587|consen 26 VIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH--PNVATFYGAFIKKDPGNGDQLWLVMEFC 103 (953)
T ss_pred EEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC--CCcceEEEEEEEecCCCCCeEEEEeecc
Confidence 355677778888864 233 4677887652 245578899999988765 4678887764322 56899999999
Q ss_pred cCCC
Q 020393 128 EFGS 131 (326)
Q Consensus 128 ~G~~ 131 (326)
.|++
T Consensus 104 ~gGS 107 (953)
T KOG0587|consen 104 GGGS 107 (953)
T ss_pred CCcc
Confidence 9864
No 382
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=96.45 E-value=0.025 Score=49.26 Aligned_cols=75 Identities=13% Similarity=0.003 Sum_probs=47.0
Q ss_pred EeEeCCccccceEEEEeC-C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
.+.++.|..+.+|++... + ..+++|...... ...+..|...++.+.. ..+++++..... ....+++||+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~ 80 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH---PNIISYKEAFLD-GNKLCIVMEY 80 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC---CCchhhhhhhcc-CCEEEEEehh
Confidence 456778888899998753 3 378998875321 1223456666665542 235555433322 4688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
++|.++
T Consensus 81 ~~~~~L 86 (256)
T cd08530 81 APFGDL 86 (256)
T ss_pred cCCCCH
Confidence 998754
No 383
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.45 E-value=0.0023 Score=61.90 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=59.1
Q ss_pred CCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCc--cEEEEecCCCCc------chHHHHHHHHHHHHhcCCC
Q 020393 33 LSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSIGP------SMFEGEALGLGAMYETRTI 104 (326)
Q Consensus 33 ~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~~~------~~~~~E~~~l~~L~~~~~~ 104 (326)
+.+.+|.++..+..|.--...+..||.|.+..||.-..... -+.+|--...+. ..+-+|+.+|+.|.
T Consensus 10 lKDPeiA~LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~----- 84 (948)
T KOG0577|consen 10 LKDPEIADLFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR----- 84 (948)
T ss_pred CCCchHHHHHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-----
Confidence 56778888887775543346788899999999999876433 333343322111 23557877776664
Q ss_pred CCcceeeecc--cCCCceEEEEeeecCC
Q 020393 105 RAPRPFKVGA--LPTGGSYIIMEFIEFG 130 (326)
Q Consensus 105 ~vP~~~~~~~--~~~~~~~~v~e~l~G~ 130 (326)
-|..+.+.. ..+...|+||||+-|.
T Consensus 85 -HPntieYkgCyLre~TaWLVMEYClGS 111 (948)
T KOG0577|consen 85 -HPNTIEYKGCYLREHTAWLVMEYCLGS 111 (948)
T ss_pred -CCCcccccceeeccchHHHHHHHHhcc
Confidence 455554432 1256889999999885
No 384
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=96.45 E-value=0.024 Score=49.95 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=46.8
Q ss_pred eEeCCccccceEEEEe--CCccEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 55 CPVGGGCINLASRYGT--DAGSFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
+.++.|..+.+|++.. ++..+++|...... ...+..|...++.+... .+++++..... .+..+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~~v 81 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHP---HIIRMLGATCE-DSHFNLF 81 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCC---ceehhhceecc-CCeEEEE
Confidence 4567888899999865 23478888765311 12355677777776532 23344433221 4678999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|++.+|.++
T Consensus 82 ~e~~~~~~L 90 (268)
T cd06630 82 VEWMAGGSV 90 (268)
T ss_pred EeccCCCcH
Confidence 999998754
No 385
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=96.37 E-value=0.043 Score=49.59 Aligned_cols=77 Identities=16% Similarity=0.149 Sum_probs=45.4
Q ss_pred eeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393 51 ITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 120 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 120 (326)
...++.++.|..+.+|++... ++ .+++|....... ..+..|..+++.+.. -.+.+++.... .+..
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~niv~~~~~~~--~~~~ 83 (303)
T cd05110 9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH---PHLVRLLGVCL--SPTI 83 (303)
T ss_pred ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcccEEEEEc--CCCc
Confidence 445667888999999998752 23 367787654321 124456666555532 22344444332 2456
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
++++++.+++.+
T Consensus 84 ~~v~e~~~~g~l 95 (303)
T cd05110 84 QLVTQLMPHGCL 95 (303)
T ss_pred eeeehhcCCCCH
Confidence 788898887544
No 386
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=96.37 E-value=0.057 Score=47.81 Aligned_cols=78 Identities=19% Similarity=0.149 Sum_probs=46.5
Q ss_pred eeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393 51 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 119 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 119 (326)
..-...++.|..+.+|+..... ..+.+|...... ...+..|...+..+.. -.+.+++..... .+.
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~ 83 (277)
T cd05032 8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC---HHVVRLLGVVST-GQP 83 (277)
T ss_pred eeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC---CceeEEEEEEcC-CCC
Confidence 3445678888889999876532 368889875421 1223445555544422 123344433222 467
Q ss_pred eEEEEeeecCCCC
Q 020393 120 SYIIMEFIEFGSS 132 (326)
Q Consensus 120 ~~~v~e~l~G~~~ 132 (326)
.+++||+.+|.++
T Consensus 84 ~~~v~e~~~~~~L 96 (277)
T cd05032 84 TLVVMELMAKGDL 96 (277)
T ss_pred cEEEEecCCCCCH
Confidence 8999999987654
No 387
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=96.37 E-value=0.023 Score=50.25 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=45.2
Q ss_pred eEeCCccccceEEEEeCCc----cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecc--cC---CCce
Q 020393 55 CPVGGGCINLASRYGTDAG----SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA--LP---TGGS 120 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~~----~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~--~~---~~~~ 120 (326)
+.++.|..+.||+....+. .+.+|..... ....+..|.+.++.+.. -.+.+++.... .. ....
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH---PNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEccCCcccCCCCc
Confidence 3467888899999876432 4777876432 12335567777766642 23555554321 10 2357
Q ss_pred EEEEeeecCCCC
Q 020393 121 YIIMEFIEFGSS 132 (326)
Q Consensus 121 ~~v~e~l~G~~~ 132 (326)
+++|+|.+|.++
T Consensus 82 ~~v~e~~~~~~l 93 (272)
T cd05075 82 VVILPFMKHGDL 93 (272)
T ss_pred EEEEEeCCCCcH
Confidence 899999998654
No 388
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=96.36 E-value=0.033 Score=50.19 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=44.9
Q ss_pred eeeEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeeccc-------C
Q 020393 51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-------P 116 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-------~ 116 (326)
..-.+.++.|....+|++... +..+++|..... .......|.+.++.+... .+.+++..... .
T Consensus 10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHP---NVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCC---Cccchhhheeccccccccc
Confidence 344566888888999998763 347888876421 112345688888877532 12223221110 0
Q ss_pred CCceEEEEeeecC
Q 020393 117 TGGSYIIMEFIEF 129 (326)
Q Consensus 117 ~~~~~~v~e~l~G 129 (326)
....+++|+|.++
T Consensus 87 ~~~~~lv~~~~~~ 99 (311)
T cd07866 87 RGSVYMVTPYMDH 99 (311)
T ss_pred CceEEEEEecCCc
Confidence 2356889998764
No 389
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=96.35 E-value=0.082 Score=46.34 Aligned_cols=27 Identities=22% Similarity=0.139 Sum_probs=23.4
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||++++++...+.|+.
T Consensus 117 ~~i~H~dlk~~nili~~~~~~kl~dfg 143 (262)
T cd05058 117 KKFVHRDLAARNCMLDESFTVKVADFG 143 (262)
T ss_pred CCccccccCcceEEEcCCCcEEECCcc
Confidence 479999999999999988777888963
No 390
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=96.33 E-value=0.026 Score=51.88 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=42.9
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeee---cccC-CCceEE
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKV---GALP-TGGSYI 122 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~---~~~~-~~~~~~ 122 (326)
-.+.++.|..+.+|++... +..+++|...... ...+..|..+++.+... .+.+++.. .... ....++
T Consensus 9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHE---NIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCC---CcCchhheeecccccccceEEE
Confidence 3566788888899998653 3478899875321 12244577777766532 12223222 1110 235689
Q ss_pred EEeeecC
Q 020393 123 IMEFIEF 129 (326)
Q Consensus 123 v~e~l~G 129 (326)
+++++++
T Consensus 86 v~e~~~~ 92 (336)
T cd07849 86 VQELMET 92 (336)
T ss_pred Eehhccc
Confidence 9998875
No 391
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=96.33 E-value=0.018 Score=52.23 Aligned_cols=143 Identities=19% Similarity=0.179 Sum_probs=80.1
Q ss_pred EeEeCCccccceEEEEeC-Cc-cEEEEecCC-C---C-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS-I---G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~-~---~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
+.+|++|...-|||.... ++ -+.+|.-.. . . +-.--+|..+|.......-+.|=+|+--.. -+..|+||||
T Consensus 81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~--~d~iy~VMe~ 158 (419)
T KOG0663|consen 81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN--MDKIYIVMEY 158 (419)
T ss_pred HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc--cceeeeeHHH
Confidence 445789999999998753 23 355555432 1 1 111235776665554321122333332221 3578999999
Q ss_pred ecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHH
Q 020393 127 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 206 (326)
Q Consensus 127 l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 206 (326)
++-. .+ +-||....+ |+- ... +-+.
T Consensus 159 ~EhD-----Lk------sl~d~m~q~---F~~-------------------------~ev----------------K~L~ 183 (419)
T KOG0663|consen 159 VEHD-----LK------SLMETMKQP---FLP-------------------------GEV----------------KTLM 183 (419)
T ss_pred HHhh-----HH------HHHHhccCC---Cch-------------------------HHH----------------HHHH
Confidence 9742 11 123443321 320 000 1122
Q ss_pred HHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-c-ccCchhh
Q 020393 207 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEA 258 (326)
Q Consensus 207 ~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~-~~G~~~~ 258 (326)
.+++..+.-+ ...-++|.||++.|+|....|..-|-||. + .+|.|.-
T Consensus 184 ~QlL~glk~l-----H~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k 232 (419)
T KOG0663|consen 184 LQLLRGLKHL-----HDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK 232 (419)
T ss_pred HHHHHHHHHH-----hhceeEecccchhheeeccCCcEEecccchhhhhcCCcc
Confidence 2333333321 24478999999999999988988999984 4 5999943
No 392
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=96.30 E-value=0.031 Score=51.10 Aligned_cols=73 Identities=15% Similarity=0.191 Sum_probs=44.4
Q ss_pred EeEeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEE
Q 020393 54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 122 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~ 122 (326)
.+.++.|..+.+|++...+ ..+++|..... ....+..|...++.+... .+.+++...... .+..|+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHE---NIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCc---chhhhhhhhcccCcccccceEE
Confidence 3567888889999998643 47888876532 123466787777777521 233333222111 136799
Q ss_pred EEeeecC
Q 020393 123 IMEFIEF 129 (326)
Q Consensus 123 v~e~l~G 129 (326)
+|+++++
T Consensus 82 v~e~~~~ 88 (330)
T cd07834 82 VTELMET 88 (330)
T ss_pred Eecchhh
Confidence 9998764
No 393
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.30 E-value=0.035 Score=52.65 Aligned_cols=73 Identities=15% Similarity=0.160 Sum_probs=46.0
Q ss_pred EeCCccccceEEEEe--CCccEEEEecCCC------------C-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC
Q 020393 56 PVGGGCINLASRYGT--DAGSFFVKTNRSI------------G-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP 116 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~--~~~~~vlK~~~~~------------~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~ 116 (326)
.+|.|....|=+-.. ++.-|-+|+-+.. . .+....|.++++.|.. ..|-+++..-+++
T Consensus 104 eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H---~nVV~LiEvLDDP 180 (576)
T KOG0585|consen 104 EIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH---PNVVKLIEVLDDP 180 (576)
T ss_pred hhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC---cCeeEEEEeecCc
Confidence 456666554433322 2235777876431 1 1356789999988864 4577777765444
Q ss_pred -CCceEEEEeeecCCC
Q 020393 117 -TGGSYIIMEFIEFGS 131 (326)
Q Consensus 117 -~~~~~~v~e~l~G~~ 131 (326)
....|+|+||+..+.
T Consensus 181 ~s~~~YlVley~s~G~ 196 (576)
T KOG0585|consen 181 ESDKLYLVLEYCSKGE 196 (576)
T ss_pred ccCceEEEEEeccCCc
Confidence 578999999998654
No 394
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.30 E-value=0.04 Score=50.60 Aligned_cols=75 Identities=15% Similarity=0.083 Sum_probs=45.4
Q ss_pred eeEeEeCCccccceEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 52 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.-++.++.|..+.+|++... + ..+++|..... ....+..|.++++.+..- .+.+++..........++++
T Consensus 13 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~lv~ 89 (328)
T cd07856 13 VDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHE---NIISLSDIFISPLEDIYFVT 89 (328)
T ss_pred EEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCC---CeeeEeeeEecCCCcEEEEe
Confidence 34577888889999998754 3 36888865321 123455688777777531 13333333222135788999
Q ss_pred eeecC
Q 020393 125 EFIEF 129 (326)
Q Consensus 125 e~l~G 129 (326)
|+..+
T Consensus 90 e~~~~ 94 (328)
T cd07856 90 ELLGT 94 (328)
T ss_pred ehhcc
Confidence 98743
No 395
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.30 E-value=0.008 Score=49.93 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=60.8
Q ss_pred eeeEeEeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393 51 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 129 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 129 (326)
+.....++-|+.+-+|.....++..++|..+.++ +..++.|+++|+-++.. -..|++|.++. .++.|||++|
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~--~~~p~vy~yg~-----~~i~me~i~G 96 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGE--GVTPEVYFYGE-----DFIRMEYIDG 96 (201)
T ss_pred hhhhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhc--CCCceEEEech-----hhhhhhhhcC
Confidence 4445567888999999999888899999988754 56689999999999864 46999999974 4677999999
Q ss_pred CCC
Q 020393 130 GSS 132 (326)
Q Consensus 130 ~~~ 132 (326)
.++
T Consensus 97 ~~L 99 (201)
T COG2112 97 RPL 99 (201)
T ss_pred cch
Confidence 765
No 396
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=96.29 E-value=0.018 Score=56.00 Aligned_cols=136 Identities=18% Similarity=0.132 Sum_probs=85.1
Q ss_pred ceeeEeEeCCccccceEEEEeCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
++.-.++||.|.+.+|||-.. -|++-||+...+ ..+.|+.|+.+++.-+.. =-++..+..-.....+|.
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~w-hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~-----NIlLFMG~~~~p~~AIiT 466 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRW-HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHE-----NILLFMGACMNPPLAIIT 466 (678)
T ss_pred Hhhccceeccccccceeeccc-ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchh-----hheeeehhhcCCceeeee
Confidence 566678899999999999654 357788877532 235578898887755432 224555533234559999
Q ss_pred eeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 020393 125 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ 204 (326)
Q Consensus 125 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~ 204 (326)
.|.+|..+ -.-+|..... |. +... .+
T Consensus 467 qwCeGsSL----------Y~hlHv~etk---fd----------------------------m~~~-------------id 492 (678)
T KOG0193|consen 467 QWCEGSSL----------YTHLHVQETK---FD----------------------------MNTT-------------ID 492 (678)
T ss_pred hhccCchh----------hhhccchhhh---hh----------------------------HHHH-------------HH
Confidence 99999865 3334443321 10 1111 11
Q ss_pred HHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 205 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 205 ~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++..+.+. +| ....+||.||+..||++++|+.+.|=||.
T Consensus 493 IAqQiaqGM~-YL----HAK~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 493 IAQQIAQGMD-YL----HAKNIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred HHHHHHHhhh-hh----hhhhhhhhhccccceEEccCCcEEEeccc
Confidence 2233333333 22 24589999999999999988767777764
No 397
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.28 E-value=0.041 Score=50.48 Aligned_cols=74 Identities=12% Similarity=0.088 Sum_probs=44.4
Q ss_pred EeEeCCccccceEEEEeCC---c-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC---CCceE
Q 020393 54 ICPVGGGCINLASRYGTDA---G-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSY 121 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~---~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---~~~~~ 121 (326)
.+.++.|..+.+|++.... + .+++|..+.. . ...+..|..+++.+.++ -.+++.+...... ....+
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~~~~~~~~~~ 82 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGH--KNITCLYDMDIVFPGNFNELY 82 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCC--CChheeeeeeeeccccCCcEE
Confidence 3457788889999998643 2 6888876531 1 12345688888777544 2344555432111 23567
Q ss_pred EEEeeecC
Q 020393 122 IIMEFIEF 129 (326)
Q Consensus 122 ~v~e~l~G 129 (326)
+++++..+
T Consensus 83 ~~~e~~~~ 90 (332)
T cd07857 83 LYEELMEA 90 (332)
T ss_pred EEEecccC
Confidence 77787754
No 398
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=96.24 E-value=0.024 Score=50.80 Aligned_cols=73 Identities=16% Similarity=0.102 Sum_probs=43.9
Q ss_pred EeEeCCccccceEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e 125 (326)
+..++.|....+|+..... + .+++|...... ...+..|...+..+.. -.++.++...... .+..+++||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~~~~~~~~lv~e 86 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH---PNIVTVKEVVVGSNLDKIYMVME 86 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC---CCEEEEEEEEEecCCCcEEEEeh
Confidence 3456778888999988643 3 67788764311 1123457777766642 2244444332221 268899999
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
++++
T Consensus 87 ~~~~ 90 (293)
T cd07843 87 YVEH 90 (293)
T ss_pred hcCc
Confidence 9975
No 399
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=96.20 E-value=0.045 Score=49.27 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=43.8
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeeccc----CCCceE
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGSY 121 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~----~~~~~~ 121 (326)
-+..++.|..+.+|+.... ...+++|..... . ......|..+++.+....-+++..+...... ..+..+
T Consensus 16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 95 (310)
T cd07865 16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFY 95 (310)
T ss_pred EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEE
Confidence 3566888888999998764 337888876431 1 1223467777777753211222222211111 024569
Q ss_pred EEEeeecC
Q 020393 122 IIMEFIEF 129 (326)
Q Consensus 122 ~v~e~l~G 129 (326)
++||+..+
T Consensus 96 lv~e~~~~ 103 (310)
T cd07865 96 LVFEFCEH 103 (310)
T ss_pred EEEcCCCc
Confidence 99999865
No 400
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=96.19 E-value=0.036 Score=50.23 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=22.3
Q ss_pred cceeecCCCCCCeeecCCCCeEEEcc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDP 249 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~ 249 (326)
..+||+|++|+||+++.++..-+.|+
T Consensus 120 ~~ivH~dlk~~Nili~~~~~~kl~d~ 145 (314)
T cd08216 120 KGFIHRSVKASHILLSGDGKVVLSGL 145 (314)
T ss_pred CCeecCCCCcceEEEecCCceEEecC
Confidence 36999999999999998777777785
No 401
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=96.15 E-value=0.044 Score=58.06 Aligned_cols=73 Identities=19% Similarity=0.233 Sum_probs=47.1
Q ss_pred eEeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 55 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
..++.|....||+.... ++ .+++|...... .....|.+.++.+.. -.+.+++..... .+..++||||++|+.+
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~l~~l~H---pnIv~~~~~~~~-~~~~~lv~Ey~~~g~L 770 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVN-SIPSSEIADMGKLQH---PNIVKLIGLCRS-EKGAYLIHEYIEGKNL 770 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCc-cccHHHHHHHhhCCC---CCcceEEEEEEc-CCCCEEEEeCCCCCcH
Confidence 35788888999999863 33 78888765322 122345655555532 235566665433 4678999999998755
No 402
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=96.11 E-value=0.048 Score=48.99 Aligned_cols=73 Identities=16% Similarity=0.159 Sum_probs=43.2
Q ss_pred EeEeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC---------C
Q 020393 54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---------T 117 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---------~ 117 (326)
...++.|..+.+|+..... + .+++|..... ....+..|.++++.+..- .+.+++...... .
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~---~i~~~~~~~~~~~~~~~~~~~~ 88 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHR---NIVNLKEIVTDKQDALDFKKDK 88 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCC---CeeeeeheecCcchhhhccccC
Confidence 3457778888999988743 3 6777876431 123345677777766421 223333222110 2
Q ss_pred CceEEEEeeecC
Q 020393 118 GGSYIIMEFIEF 129 (326)
Q Consensus 118 ~~~~~v~e~l~G 129 (326)
+..++++|+++|
T Consensus 89 ~~~~lv~e~~~~ 100 (302)
T cd07864 89 GAFYLVFEYMDH 100 (302)
T ss_pred CcEEEEEcccCc
Confidence 367999999876
No 403
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=96.11 E-value=0.025 Score=51.81 Aligned_cols=69 Identities=10% Similarity=0.031 Sum_probs=41.4
Q ss_pred ccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 60 GCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 60 G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
|..+.+|+.... +..+.+|+..... ...++.|..+++.+.. -.+.+++..... .+..++++++++|.++
T Consensus 11 ~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h---~niv~~~~~~~~-~~~~~~v~e~~~~~~l 86 (328)
T cd08226 11 CNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRH---PNIMTSWTVFTT-GSWLWVISPFMAYGSA 86 (328)
T ss_pred cCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcceEeeeEec-CCceEEEEecccCCCH
Confidence 366789998763 3478888875321 1335566665555542 124444444332 4678999999988644
No 404
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=96.09 E-value=0.031 Score=49.18 Aligned_cols=73 Identities=16% Similarity=0.189 Sum_probs=43.1
Q ss_pred EeCCccccceEEEEeCC-c--------cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 56 PVGGGCINLASRYGTDA-G--------SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~-~--------~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
.++.|..+.||+..... + ++++|...... .+.+..|...++.+.. -.+.+++..... .+..+++
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~lv 77 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH---KHLVLNYGVCVC-GDESIMV 77 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC---CChhheeeEEEe-CCCcEEE
Confidence 46778889999986532 1 36667654322 1234456655555432 224444444332 4578999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|||++|..+
T Consensus 78 ~e~~~~g~L 86 (258)
T cd05078 78 QEYVKFGSL 86 (258)
T ss_pred EecCCCCcH
Confidence 999998755
No 405
>PHA03210 serine/threonine kinase US3; Provisional
Probab=96.08 E-value=0.0078 Score=58.93 Aligned_cols=27 Identities=30% Similarity=0.278 Sum_probs=24.2
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..+||+|++|.|||++.++...|+|+.
T Consensus 286 ~gIiHrDLKP~NILl~~~~~vkL~DFG 312 (501)
T PHA03210 286 KKLIHRDIKLENIFLNCDGKIVLGDFG 312 (501)
T ss_pred CCeecCCCCHHHEEECCCCCEEEEeCC
Confidence 479999999999999988888899974
No 406
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=96.05 E-value=0.029 Score=55.81 Aligned_cols=27 Identities=26% Similarity=0.328 Sum_probs=22.9
Q ss_pred cceeecCCCCCCeeecCC-CCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKN-GEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~-~~~~iID~~ 250 (326)
..+||+|++|.|||++++ +...|+||.
T Consensus 274 ~gIiHRDLKP~NILl~~~~~~~KL~DFG 301 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSGSFKIIDLG 301 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCCcEEEEeCC
Confidence 479999999999999864 567899974
No 407
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=96.05 E-value=0.097 Score=46.16 Aligned_cols=75 Identities=17% Similarity=0.148 Sum_probs=48.8
Q ss_pred EeEeCCccccceEEEEeC------CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 54 ICPVGGGCINLASRYGTD------AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~------~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
...++.|....+|+.+.. ...+++|..... . ...+..|.+.++.+ ++ -.+.++++.... .+..++|
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h--~ni~~~~g~~~~-~~~~~lv 79 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RH--PNIVKLYGFCIE-NEPLFLV 79 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SB--TTBE-EEEEEES-SSSEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cc--cccccccccccc-ccccccc
Confidence 456888999999998876 226888988542 1 24466677777766 32 246666665442 4568999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
+|+.+++++
T Consensus 80 ~e~~~~g~L 88 (259)
T PF07714_consen 80 MEYCPGGSL 88 (259)
T ss_dssp EE--TTEBH
T ss_pred ccccccccc
Confidence 999987654
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.04 E-value=0.11 Score=47.85 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=55.5
Q ss_pred eeEeEeCCccccceEEEEeCCc---cEEEEecCCC---CcchHHHHHHHHHHHHh-cCCCCCcceeeecccCCCceEEEE
Q 020393 52 TKICPVGGGCINLASRYGTDAG---SFFVKTNRSI---GPSMFEGEALGLGAMYE-TRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~~---~~vlK~~~~~---~~~~~~~E~~~l~~L~~-~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.-...++.|..+.+|.+...+. .+++|.-... ....+..|..++..+.. .....+|.++..+...++..|+||
T Consensus 21 ~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM 100 (322)
T KOG1164|consen 21 KLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVM 100 (322)
T ss_pred EEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEE
Confidence 3456688999999999986543 5888887542 12267889999999974 224579999988842256889998
Q ss_pred eee
Q 020393 125 EFI 127 (326)
Q Consensus 125 e~l 127 (326)
+-+
T Consensus 101 ~l~ 103 (322)
T KOG1164|consen 101 SLL 103 (322)
T ss_pred ecc
Confidence 866
No 409
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=96.02 E-value=0.0041 Score=53.52 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=61.6
Q ss_pred ccccccccCCCchhHHHHHH-hc-C--CCc--ceeeEeEeCCccccceEEEE--eCCccEEEEecCCCCcchHHHHHHHH
Q 020393 24 FSKRRTFATLSDDPIREWIL-SE-G--KAT--HITKICPVGGGCINLASRYG--TDAGSFFVKTNRSIGPSMFEGEALGL 95 (326)
Q Consensus 24 ~~~~~~~~~~~~~~i~~~l~-~~-~--~~~--~v~~v~~l~~G~~n~~y~v~--~~~~~~vlK~~~~~~~~~~~~E~~~l 95 (326)
+|.-+|||.++..--+++-. +. - -|. .-.=+..+|.|-.+.||.-. +++.+.|+|+-.+.-...+..|..+|
T Consensus 7 ~s~ARvya~vn~~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL 86 (338)
T KOG0668|consen 7 PSVARVYADVNEERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKIL 86 (338)
T ss_pred chhhhhhhhccccCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHH
Confidence 45567888888766554432 11 0 110 11124457888888888754 45668999998775566788999999
Q ss_pred HHHHhcCCCCCcceeeecccC-CCceEEEEeeecCC
Q 020393 96 GAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEFG 130 (326)
Q Consensus 96 ~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~l~G~ 130 (326)
+-|... -.+-+++..-.++ ...+.+++|++...
T Consensus 87 ~nL~gg--~NIi~L~DiV~Dp~SktpaLiFE~v~n~ 120 (338)
T KOG0668|consen 87 QNLRGG--PNIIKLLDIVKDPESKTPSLIFEYVNNT 120 (338)
T ss_pred HhccCC--CCeeehhhhhcCccccCchhHhhhhccc
Confidence 998742 2222232221211 23556666666543
No 410
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.02 E-value=0.09 Score=51.46 Aligned_cols=27 Identities=22% Similarity=0.318 Sum_probs=23.9
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||+++.++...|+|+.
T Consensus 328 ~~ivHrDLKp~NILl~~~~~~kL~DFG 354 (507)
T PLN03224 328 IGIVHRDIKPENLLVTVDGQVKIIDFG 354 (507)
T ss_pred CCeecCCCchHhEEECCCCcEEEEeCc
Confidence 469999999999999988878899974
No 411
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=96.00 E-value=0.03 Score=52.67 Aligned_cols=29 Identities=31% Similarity=0.337 Sum_probs=22.1
Q ss_pred CCcceeecCCCCCCeeecCCCC---eEEEccc
Q 020393 222 VEPCLLHGDLWSGNISSDKNGE---PVILDPA 250 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~---~~iID~~ 250 (326)
..+.+||-||+|+|||+..+.. .-|-||.
T Consensus 587 ikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 587 IKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 5789999999999999976543 3456653
No 412
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=95.97 E-value=0.046 Score=49.56 Aligned_cols=74 Identities=9% Similarity=-0.050 Sum_probs=43.8
Q ss_pred eEeEeCCccccceEEEEeCC--ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393 53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 124 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 124 (326)
.+..++.|..+.+|++.... ..+++|..... . ...+..|.+.++.+... .+.+++..... ....+++|
T Consensus 19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~ 94 (308)
T cd06634 19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP---NTIQYRGCYLR-EHTAWLVM 94 (308)
T ss_pred HHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCC---CcccEEEEEEc-CCeeEEEE
Confidence 34567778888999987632 36778876421 1 12234577666666432 23333332222 46789999
Q ss_pred eeecCC
Q 020393 125 EFIEFG 130 (326)
Q Consensus 125 e~l~G~ 130 (326)
|++.|.
T Consensus 95 e~~~~~ 100 (308)
T cd06634 95 EYCLGS 100 (308)
T ss_pred EccCCC
Confidence 999763
No 413
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.97 E-value=0.0036 Score=55.40 Aligned_cols=71 Identities=17% Similarity=0.119 Sum_probs=43.4
Q ss_pred EeCCccccceEEEEe-CCcc-EEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecc---cCCCc-eEEEE
Q 020393 56 PVGGGCINLASRYGT-DAGS-FFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA---LPTGG-SYIIM 124 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~-~~~~-~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~~~~~-~~~v~ 124 (326)
.+|.|.++.+|++++ .+|. +.+|--... .+..+..|..+|+.|. -|.++.+.. ..++. -+++|
T Consensus 26 ~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~------HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 26 KIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN------HPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC------CchHHHHHHHhhhccchhhHHHH
Confidence 367889999999987 4554 455533221 2345667888777764 345554321 11333 68899
Q ss_pred eeecCCCC
Q 020393 125 EFIEFGSS 132 (326)
Q Consensus 125 e~l~G~~~ 132 (326)
|+.+++++
T Consensus 100 E~c~~GDL 107 (375)
T KOG0591|consen 100 ELCDAGDL 107 (375)
T ss_pred HhhcccCH
Confidence 99887643
No 414
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=95.92 E-value=0.06 Score=49.48 Aligned_cols=73 Identities=12% Similarity=0.083 Sum_probs=43.1
Q ss_pred eEeCCccccceEEEEeC--CccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEee
Q 020393 55 CPVGGGCINLASRYGTD--AGSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF 126 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~ 126 (326)
+.++.|....+|+.... +..+++|.... .....+..|...++.+..+ -.+.+++...... ....+++||+
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~lv~e~ 90 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH--PNIVKLLNVIKAENDKDIYLVFEY 90 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC--CCccceeeeeccCCCceEEEEecc
Confidence 34667777889988653 33688885532 1123355688888888333 2234444432211 2357999999
Q ss_pred ecC
Q 020393 127 IEF 129 (326)
Q Consensus 127 l~G 129 (326)
++|
T Consensus 91 ~~~ 93 (337)
T cd07852 91 MET 93 (337)
T ss_pred ccc
Confidence 975
No 415
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=95.91 E-value=0.021 Score=53.81 Aligned_cols=75 Identities=15% Similarity=0.065 Sum_probs=50.4
Q ss_pred eEeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393 55 CPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 126 (326)
+.++.|....||+..... | .|-+|.-... ....+..|+.+|+.|..+ -.+-.+...-.+ ....++|||.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~h--pniv~l~~~~e~-~~~~~lvmEL 117 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGH--PNIVQLKDAFED-PDSVYLVMEL 117 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCC--CCEEEEEEEEEc-CCeEEEEEEe
Confidence 568899999999988644 4 5666665431 124678999999999753 122222222222 4578999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
+.|+.+
T Consensus 118 ~~GGeL 123 (382)
T KOG0032|consen 118 CEGGEL 123 (382)
T ss_pred cCCchH
Confidence 998754
No 416
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=95.90 E-value=0.054 Score=46.32 Aligned_cols=66 Identities=14% Similarity=0.028 Sum_probs=42.1
Q ss_pred cceEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 63 NLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 63 n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
..+|+....+ ..+++|...... ...+..|.+.++.+.. -.+++++..... ....++++|++++.++
T Consensus 3 g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~~L 74 (244)
T smart00220 3 GKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH---PNIVRLYDVFED-EDKLYLVMEYCDGGDL 74 (244)
T ss_pred eEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC---CcHHHHHhheee-CCEEEEEEeCCCCCCH
Confidence 4678877653 478999986532 3456677777776632 234444443322 3688999999998644
No 417
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=95.87 E-value=0.11 Score=46.20 Aligned_cols=76 Identities=12% Similarity=0.051 Sum_probs=46.8
Q ss_pred EeEeCCccccceEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 54 ICPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
.+.++.|....+|+....+ ..+++|...... ...+..|...++.+.. ..+.+++..........+++
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~~~~~~~~~ 87 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH---QNILPILHVCIEDGEPPFVL 87 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEecCCCCCEEE
Confidence 3557888889999987643 367777765321 2334567766666632 23444555433223578999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
+++.++.++
T Consensus 88 ~~~~~~~~L 96 (280)
T cd05043 88 YPYMNWGNL 96 (280)
T ss_pred EEcCCCCcH
Confidence 999887654
No 418
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=95.87 E-value=0.031 Score=51.48 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=43.2
Q ss_pred eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceE
Q 020393 53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSY 121 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~ 121 (326)
-...++.|..+.+|+.... +..+++|..... ....+..|..+++.+... .+.+++...... ....+
T Consensus 9 ~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 9 PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHE---NVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred EEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCC---CccchHHheecccccccCcEE
Confidence 3557888889999998753 337888876431 122344677777766431 233333211110 13579
Q ss_pred EEEeeecC
Q 020393 122 IIMEFIEF 129 (326)
Q Consensus 122 ~v~e~l~G 129 (326)
++|+++.+
T Consensus 86 lv~e~~~~ 93 (337)
T cd07858 86 IVYELMDT 93 (337)
T ss_pred EEEeCCCC
Confidence 99999864
No 419
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=95.80 E-value=0.081 Score=46.84 Aligned_cols=71 Identities=15% Similarity=0.130 Sum_probs=44.2
Q ss_pred eEeCCccccceEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 55 CPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
..++.|..+.+|+..... ..+++|...... ...+..|...++.+.. -.+++++..... .+..++++|+.
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~ 80 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH---PNIVKLLDVIHT-ERKLYLVFEYC 80 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC---CCHHHHHhhhhc-CCceEEEecCc
Confidence 456778888999987643 478889876421 1234567766666642 223344433322 46889999998
Q ss_pred cC
Q 020393 128 EF 129 (326)
Q Consensus 128 ~G 129 (326)
++
T Consensus 81 ~~ 82 (282)
T cd07829 81 DM 82 (282)
T ss_pred Cc
Confidence 64
No 420
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=95.67 E-value=0.083 Score=48.76 Aligned_cols=74 Identities=15% Similarity=0.088 Sum_probs=43.2
Q ss_pred eeEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393 52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 119 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~ 119 (326)
..+..++.|..+.+|+.... +..+++|..... . ...+..|..+++.+... .+.+++...... ...
T Consensus 18 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 18 TSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHE---NVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred EEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCC---CccchhheecccccCCCCce
Confidence 34677888888899998753 347888876431 1 12345677777777432 223333322110 134
Q ss_pred eEEEEeeec
Q 020393 120 SYIIMEFIE 128 (326)
Q Consensus 120 ~~~v~e~l~ 128 (326)
.+++++++.
T Consensus 95 ~~lv~e~~~ 103 (342)
T cd07879 95 FYLVMPYMQ 103 (342)
T ss_pred EEEEecccc
Confidence 588888874
No 421
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=95.46 E-value=0.039 Score=52.63 Aligned_cols=75 Identities=21% Similarity=0.237 Sum_probs=51.1
Q ss_pred EeEeCCccccceEEEEeCCc-cEEEEecCC--CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393 54 ICPVGGGCINLASRYGTDAG-SFFVKTNRS--IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~--~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
++.++.|.+..|+.-..... ++-+|.-.. .....+..|++++..|... .+-++++.... ++..++||||++-+
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~---~lV~l~gV~~~-~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHE---KLVKLYGVCTK-QEPIYIVTEYMPKG 286 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCccc---CeEEEEEEEec-CCceEEEEEecccC
Confidence 34478889999998877654 565665433 2345577899999998753 35566665542 34689999999865
Q ss_pred CC
Q 020393 131 SS 132 (326)
Q Consensus 131 ~~ 132 (326)
.+
T Consensus 287 sL 288 (468)
T KOG0197|consen 287 SL 288 (468)
T ss_pred cH
Confidence 44
No 422
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=95.35 E-value=0.068 Score=49.36 Aligned_cols=27 Identities=33% Similarity=0.438 Sum_probs=23.8
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||++++++...|+|+.
T Consensus 137 ~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 137 AGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred CCeecCCCCHHHeEECCCCCEEEcccc
Confidence 368999999999999988888899963
No 423
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=95.32 E-value=0.13 Score=47.54 Aligned_cols=79 Identities=15% Similarity=0.124 Sum_probs=47.3
Q ss_pred CcceeeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccC------
Q 020393 48 ATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP------ 116 (326)
Q Consensus 48 ~~~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~------ 116 (326)
+.+-.-+++++.|..+.+|+.... +..+++|..... ....+..|.++++.+... .+.+++......
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~---~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHD---NIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCC---cchhhHhhhccccccccc
Confidence 334556788899999999998763 337888876432 123355677777766431 233333221110
Q ss_pred -------CCceEEEEeeecC
Q 020393 117 -------TGGSYIIMEFIEF 129 (326)
Q Consensus 117 -------~~~~~~v~e~l~G 129 (326)
....+++|||+++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~ 100 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMET 100 (342)
T ss_pred ccccccccceEEEEeecccc
Confidence 1346889998864
No 424
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=95.32 E-value=0.15 Score=47.03 Aligned_cols=27 Identities=30% Similarity=0.409 Sum_probs=23.7
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||++++++...|+|+.
T Consensus 139 ~~ivH~dlkp~NIll~~~~~~kl~dfg 165 (345)
T cd07877 139 ADIIHRDLKPSNLAVNEDCELKILDFG 165 (345)
T ss_pred CCeeecCCChHHEEEcCCCCEEEeccc
Confidence 369999999999999988878899963
No 425
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=95.24 E-value=0.43 Score=40.68 Aligned_cols=77 Identities=13% Similarity=0.012 Sum_probs=50.6
Q ss_pred eeEeEeCCccccceEEEEeCCccEEEEecCCCC-------------------cchHHHHHHHHHHHH-hc--CCCCCcce
Q 020393 52 TKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------------------PSMFEGEALGLGAMY-ET--RTIRAPRP 109 (326)
Q Consensus 52 ~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-------------------~~~~~~E~~~l~~L~-~~--~~~~vP~~ 109 (326)
.+..+++.|..-.+|.-- .+...++|+..+.. ......|..-...+. .. ...++|++
T Consensus 4 ~~~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 4 SESDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCCcccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 345667777777777743 23467888876543 345667777777776 33 23578888
Q ss_pred eeecccCCCceEEEEeeecCC
Q 020393 110 FKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 110 ~~~~~~~~~~~~~v~e~l~G~ 130 (326)
++.-.+ +-+..+|+|.+...
T Consensus 83 ~G~veT-~~G~Glv~e~I~d~ 102 (199)
T PF10707_consen 83 YGFVET-NLGLGLVVELIRDA 102 (199)
T ss_pred eEEEec-CCceEEEEEEEECC
Confidence 887765 44668888888643
No 426
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=95.22 E-value=0.029 Score=48.88 Aligned_cols=30 Identities=33% Similarity=0.490 Sum_probs=26.2
Q ss_pred CCcceeecCCCCCCeeecCCCCeEEEcccc
Q 020393 222 VEPCLLHGDLWSGNISSDKNGEPVILDPAC 251 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~~ 251 (326)
..+...|+|++|+|||+.+++.+.++|+.+
T Consensus 146 ~~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 146 KEPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred cCCcccccCCCcceeEecCCCceEEEeccC
Confidence 456899999999999999888899999753
No 427
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.21 E-value=0.19 Score=49.75 Aligned_cols=148 Identities=18% Similarity=0.226 Sum_probs=84.4
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 125 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 125 (326)
+.-+|-|....|+..+.. +.-|-+|.-..+ +......|.+++....++ ++- -.++..-.+ ...-|+|||
T Consensus 373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~H-PFL-~~L~~~fQT-~~~l~fvme 449 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRH-PFL-VNLFSCFQT-KEHLFFVME 449 (694)
T ss_pred EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccC-CeE-eeccccccc-CCeEEEEEE
Confidence 344688999999998874 335777877542 234456788888777643 221 112211122 468899999
Q ss_pred eecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 020393 126 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 205 (326)
Q Consensus 126 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 205 (326)
|+.|+++ +|-.... .|. +.-..||..
T Consensus 450 y~~Ggdm-------------~~~~~~~--~F~-----------------e~rarfyaA---------------------- 475 (694)
T KOG0694|consen 450 YVAGGDL-------------MHHIHTD--VFS-----------------EPRARFYAA---------------------- 475 (694)
T ss_pred ecCCCcE-------------EEEEecc--ccc-----------------HHHHHHHHH----------------------
Confidence 9999753 1211110 121 111123321
Q ss_pred HHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cccCchhhhhhhhhh
Q 020393 206 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC 265 (326)
Q Consensus 206 ~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G~~~~Dla~~~~ 265 (326)
+++-.+. +| ....+|+.||+.+|||+|.+|..-|.|+. |--|-.--|-+...|
T Consensus 476 --ev~l~L~-fL----H~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfC 529 (694)
T KOG0694|consen 476 --EVVLGLQ-FL----HENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFC 529 (694)
T ss_pred --HHHHHHH-HH----HhcCceeeecchhheEEcccCcEEecccccccccCCCCCcccccc
Confidence 0111111 22 24589999999999999999999999984 433332333333344
No 428
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=95.20 E-value=0.068 Score=49.74 Aligned_cols=92 Identities=12% Similarity=0.018 Sum_probs=54.4
Q ss_pred hhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeC----Ccc-EEEE-ecCCCCcchHHHHHHHHHHHHhcCCCCCcc
Q 020393 36 DPIREWILSE-GKATHITKICPVGGGCINLASRYGTD----AGS-FFVK-TNRSIGPSMFEGEALGLGAMYETRTIRAPR 108 (326)
Q Consensus 36 ~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~----~~~-~vlK-~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~ 108 (326)
+++.+..... +....-..+.+++.|..+.||.-+.- .++ +-+| ++....+..+..|.+.|..+... -.|-.
T Consensus 22 ee~~~l~q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~--~ni~~ 99 (418)
T KOG1167|consen 22 EEIEQLRQDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGS--DNIIK 99 (418)
T ss_pred hHHHHHHhhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccc--hhhhc
Confidence 4444444433 22223456788999999999885542 223 4444 44445567788898888877653 12222
Q ss_pred eeeecccCCCceEEEEeeecCC
Q 020393 109 PFKVGALPTGGSYIIMEFIEFG 130 (326)
Q Consensus 109 ~~~~~~~~~~~~~~v~e~l~G~ 130 (326)
+...-.- .+...+|++|++..
T Consensus 100 ~~~~~rn-nd~v~ivlp~~~H~ 120 (418)
T KOG1167|consen 100 LNGCFRN-NDQVAIVLPYFEHD 120 (418)
T ss_pred chhhhcc-CCeeEEEecccCcc
Confidence 2222211 46889999998764
No 429
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=95.13 E-value=0.2 Score=48.39 Aligned_cols=73 Identities=16% Similarity=0.104 Sum_probs=47.4
Q ss_pred eeeEeEeCCccccceEEEEe-CCc-cEEEEecC-----CCCcchHHHHHHHHHHHHhcCCCCCcceeee---cccCCCce
Q 020393 51 ITKICPVGGGCINLASRYGT-DAG-SFFVKTNR-----SIGPSMFEGEALGLGAMYETRTIRAPRPFKV---GALPTGGS 120 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~-----~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~---~~~~~~~~ 120 (326)
|..-+-++.|++..||--.- ..| .+.+|+-. ......+++|+++|+.+.. |-++-. -++ .++.
T Consensus 566 if~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~H------PGiV~le~M~ET-~erv 638 (888)
T KOG4236|consen 566 IFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHH------PGIVNLECMFET-PERV 638 (888)
T ss_pred hhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCC------CCeeEEEEeecC-CceE
Confidence 33445577889888887432 333 56666542 2345778999999988764 333322 222 4688
Q ss_pred EEEEeeecCC
Q 020393 121 YIIMEFIEFG 130 (326)
Q Consensus 121 ~~v~e~l~G~ 130 (326)
|+|||.+.|.
T Consensus 639 FVVMEKl~GD 648 (888)
T KOG4236|consen 639 FVVMEKLHGD 648 (888)
T ss_pred EEEehhhcch
Confidence 9999999885
No 430
>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]
Probab=95.11 E-value=0.072 Score=48.63 Aligned_cols=114 Identities=18% Similarity=0.216 Sum_probs=60.5
Q ss_pred cHHHHHHHHHHHhhcCCCC---CCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcC-C----hHHHHHH
Q 020393 135 NQSVFGKKLAEMHKAGKSS---KGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG-D----STIYQRG 206 (326)
Q Consensus 135 ~~~~lg~~La~lH~~~~~~---~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~-~----~~~~~~~ 206 (326)
.+..+|..++.+|+...+. +.||- .+. ..-..-|.+. +...+..+.+... + ..+.+..
T Consensus 200 ~a~alG~av~~vHsaLA~~sddpafg~--e~~-------ea~v~~w~~R-----la~rls~~~d~l~~p~~ea~~l~~~~ 265 (438)
T COG3281 200 EAGALGEAVAEVHSALASCSDDPAFGE--ETD-------EATVEAWADR-----LAERLSEAEDLLRGPAAEAPELLEYA 265 (438)
T ss_pred HHHHHHHHHHHHHHHHhCCccCccCCC--ccc-------cchHHHHHHH-----HHHHHHHHHhhhhchHHHHHHHHHhh
Confidence 3578999999999998752 22331 100 0111233332 3333333322111 1 1123333
Q ss_pred HHHHHHhcccccCC-CCCcceeecCCCCCCeeecCCCCeEEEccc--c--------ccCchhhhhhhh
Q 020393 207 HRLMKNLAPLFEGV-NVEPCLLHGDLWSGNISSDKNGEPVILDPA--C--------YYGHNEAEFGMS 263 (326)
Q Consensus 207 ~~l~~~~~~~l~~~-~~~~~LiHgDl~~~NiL~~~~~~~~iID~~--~--------~~G~~~~Dla~~ 263 (326)
..+++.++++.... ..-..=+|||||.|.||+.++ ...+|||+ . ...+|+.|++-+
T Consensus 266 ~Al~q~~q~la~~algg~l~RvHGDLHLgQVLvt~g-~~~liDFEGEPsRpl~err~~~sPlrDvAgl 332 (438)
T COG3281 266 PALLQLFQKLAREALGGVLQRVHGDLHLGQVLVTPG-RALLIDFEGEPSRPLDERRAPDSPLRDVAGL 332 (438)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHhccceehheeeeCC-cEEEEecCCCCCCChhhccCCCCchHHHHHH
Confidence 33444333322211 112345899999999999884 47899963 2 156899999843
No 431
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.92 E-value=0.23 Score=46.95 Aligned_cols=72 Identities=13% Similarity=0.096 Sum_probs=45.4
Q ss_pred eEeCCccccceEEEEe-CCcc-EEEEecCC----CCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--CCCceEEEEee
Q 020393 55 CPVGGGCINLASRYGT-DAGS-FFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--PTGGSYIIMEF 126 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~-~~~~-~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~~~~~~~v~e~ 126 (326)
+.++.|....||+-.+ +.+. +-+|+-.- .+.+.+++|...++.+. -|.++.+..+ .+..-|+||.+
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~------HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID------HPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC------CCCcceEEEEEEecceeEEeehh
Confidence 4577888888999766 3334 44566532 12355677777666543 4666654322 15688999999
Q ss_pred ecCCCC
Q 020393 127 IEFGSS 132 (326)
Q Consensus 127 l~G~~~ 132 (326)
+.|++.
T Consensus 106 Ma~GS~ 111 (516)
T KOG0582|consen 106 MAGGSL 111 (516)
T ss_pred hcCCcH
Confidence 998653
No 432
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=94.83 E-value=0.048 Score=53.07 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=58.1
Q ss_pred CCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393 47 KATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 121 (326)
Q Consensus 47 ~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 121 (326)
+....+=++++++|.+..+-..++..+ .+-+|.-+++ .+..+..|.++|..|+. -.|-++++.... +....
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkh---PNIveLvGVC~~-DePic 611 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKH---PNIVELLGVCVQ-DDPLC 611 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCC---CCeeEEEeeeec-CCchH
Confidence 555667778899999999999888775 6777887653 24567889888887742 345566665332 45778
Q ss_pred EEEeeecCCCC
Q 020393 122 IIMEFIEFGSS 132 (326)
Q Consensus 122 ~v~e~l~G~~~ 132 (326)
+|+||.+.+.+
T Consensus 612 mI~EYmEnGDL 622 (807)
T KOG1094|consen 612 MITEYMENGDL 622 (807)
T ss_pred HHHHHHhcCcH
Confidence 89999886543
No 433
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.31 E-value=0.14 Score=50.51 Aligned_cols=55 Identities=16% Similarity=0.150 Sum_probs=36.1
Q ss_pred cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 74 SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 74 ~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
..++|+-+.. ....++.|..+++.|.+ -.|-++|..-.. ...-|+|.||++|+.+
T Consensus 39 laaiKii~k~~~~s~s~~~~IerEIviMkLi~H---pnVl~LydVwe~-~~~lylvlEyv~gGEL 99 (786)
T KOG0588|consen 39 LAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH---PNVLRLYDVWEN-KQHLYLVLEYVPGGEL 99 (786)
T ss_pred eeEEEeeccccccccccccchhhhhHHHHHhcC---CCeeeeeeeecc-CceEEEEEEecCCchh
Confidence 5677776542 24567889999998864 234444433321 3578999999999754
No 434
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=94.29 E-value=0.11 Score=50.71 Aligned_cols=102 Identities=20% Similarity=0.233 Sum_probs=56.3
Q ss_pred HHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEccccccCchhhhhhhhh---hc-C-C-ChHhH--HH
Q 020393 205 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPACYYGHNEAEFGMSW---CA-G-F-GGSFY--NS 275 (326)
Q Consensus 205 ~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID~~~~~G~~~~Dla~~~---~~-~-~-~~~fl--~~ 275 (326)
+-.+++..+. ++. ...|.+||.||+.+||++.++ |.+-|=|.. ||.+. .+ . . +++|. +-
T Consensus 148 W~RQILkGL~-yLH--s~~PPIIHRDLKCDNIFinG~~G~VKIGDLG---------LAtl~r~s~aksvIGTPEFMAPEm 215 (632)
T KOG0584|consen 148 WCRQILKGLV-YLH--SQDPPIIHRDLKCDNIFVNGNLGEVKIGDLG---------LATLLRKSHAKSVIGTPEFMAPEM 215 (632)
T ss_pred HHHHHHHHhh-hhh--cCCCCccccccccceEEEcCCcCceeecchh---------HHHHhhccccceeccCccccChHH
Confidence 3344444443 233 357899999999999999766 345565532 22221 01 0 1 13343 44
Q ss_pred hhhhCCCCcCHHHHHHHHHHHHHHHHHHHhcc---CcHHHHHHHHHHHHHHhc
Q 020393 276 YFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGS---GYRSSALSIIDDYLRMLK 325 (326)
Q Consensus 276 Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~ 325 (326)
|+ +.+-+.+.+|..-+++..+.++.= .+..+ .+|=+++++..|
T Consensus 216 YE------E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-AQIYKKV~SGiK 261 (632)
T KOG0584|consen 216 YE------ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-AQIYKKVTSGIK 261 (632)
T ss_pred Hh------hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-HHHHHHHHcCCC
Confidence 54 233456789999998877777742 22222 235555554443
No 435
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.24 E-value=0.06 Score=55.98 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=24.9
Q ss_pred eeeEeE-eCCccccceEEEEeCCc-cEEEEecCCC
Q 020393 51 ITKICP-VGGGCINLASRYGTDAG-SFFVKTNRSI 83 (326)
Q Consensus 51 v~~v~~-l~~G~~n~~y~v~~~~~-~~vlK~~~~~ 83 (326)
-..|+. +|.|....||+.+..+| .++||+..+.
T Consensus 699 ~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~ 733 (974)
T KOG1166|consen 699 KFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPP 733 (974)
T ss_pred eEEEEeeeccccceEEEEeecCCCcEEEEEeecCC
Confidence 334444 58888999999998777 6888998753
No 436
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=94.16 E-value=0.14 Score=49.84 Aligned_cols=69 Identities=12% Similarity=0.103 Sum_probs=43.0
Q ss_pred eEeCCccccceEEEEeCC-ccEE-EEecCCCCcc-----hHHHHHHHHHHHHhcCCCCCcceeeecc-cC-CCceEEEEe
Q 020393 55 CPVGGGCINLASRYGTDA-GSFF-VKTNRSIGPS-----MFEGEALGLGAMYETRTIRAPRPFKVGA-LP-TGGSYIIME 125 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~~~-~~~v-lK~~~~~~~~-----~~~~E~~~l~~L~~~~~~~vP~~~~~~~-~~-~~~~~~v~e 125 (326)
+.+|.|....||+-+... ..|| +|.-....+. -++.|+++++.|+. |.++.+-+ .+ ...-|+|.|
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkH------pniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKH------PNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCC------cchhhHHHhhcccceEEEEeh
Confidence 457889999999976543 2433 3554432222 26778888877753 55554432 11 457799999
Q ss_pred eecC
Q 020393 126 FIEF 129 (326)
Q Consensus 126 ~l~G 129 (326)
|..|
T Consensus 82 ~a~g 85 (808)
T KOG0597|consen 82 YAVG 85 (808)
T ss_pred hhhh
Confidence 9877
No 437
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=94.08 E-value=0.16 Score=44.42 Aligned_cols=26 Identities=35% Similarity=0.208 Sum_probs=21.5
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|+.|.||+++++ ...++|+.
T Consensus 125 ~~i~h~~l~~~nili~~~-~~~l~d~g 150 (260)
T cd08222 125 RRILHRDLKAKNIFLKNN-LLKIGDFG 150 (260)
T ss_pred cCccccCCChhheEeecC-CEeecccC
Confidence 478999999999999754 47788863
No 438
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=94.00 E-value=0.074 Score=50.14 Aligned_cols=60 Identities=20% Similarity=0.241 Sum_probs=44.5
Q ss_pred CCCcceeecCCCCCCeeecCCC-CeEEEc---c-ccccCchhhhhhhhh----h----cCCC--------hHhHHHhhhh
Q 020393 221 NVEPCLLHGDLWSGNISSDKNG-EPVILD---P-ACYYGHNEAEFGMSW----C----AGFG--------GSFYNSYFEV 279 (326)
Q Consensus 221 ~~~~~LiHgDl~~~NiL~~~~~-~~~iID---~-~~~~G~~~~Dla~~~----~----~~~~--------~~fl~~Y~~~ 279 (326)
..++++|+||+|.+|+=.-.+. ...++| | ++..|++++||-.+. . .+++ ..|+++|.+.
T Consensus 40 ~~~~v~icGD~Hl~NFG~~~~~~~~~vFdiNDFDEa~~gp~~wDl~Rla~Si~laa~~~gl~~~~~~~~~~~~~~~Y~~~ 119 (385)
T PF10009_consen 40 SGPPVWICGDAHLENFGAFASPEGRVVFDINDFDEALPGPFEWDLKRLATSIVLAARENGLSDKDARKAVRAFLEGYREA 119 (385)
T ss_pred CCCceEEeccchhhccCcccCCCCCEEecCCCCCcCCcCChHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999876542 246666 6 589999999997541 1 2443 4688999876
Q ss_pred C
Q 020393 280 M 280 (326)
Q Consensus 280 ~ 280 (326)
.
T Consensus 120 l 120 (385)
T PF10009_consen 120 L 120 (385)
T ss_pred H
Confidence 3
No 439
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.98 E-value=0.13 Score=47.07 Aligned_cols=33 Identities=24% Similarity=0.216 Sum_probs=26.4
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEc-cc-cccCch
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILD-PA-CYYGHN 256 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID-~~-~~~G~~ 256 (326)
...|||.|+.--|+|+.++ ++|+|| .. .--.||
T Consensus 402 Ec~LVHADlSEyN~Lw~~g-Kvw~IDVsQsvep~HP 436 (531)
T KOG2269|consen 402 ECLLVHADLSEYNLLWTPG-KVWVIDVSQSVEPSHP 436 (531)
T ss_pred hhheeecchhhhhheecCC-ceEEEechhccCCCCc
Confidence 4589999999999999887 699999 43 345555
No 440
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=93.69 E-value=0.04 Score=50.36 Aligned_cols=49 Identities=8% Similarity=0.007 Sum_probs=33.6
Q ss_pred ceeeEeEeCCccccceEEEEe--CCccEEEEecCCCCcchHHHHHHHHHHHH
Q 020393 50 HITKICPVGGGCINLASRYGT--DAGSFFVKTNRSIGPSMFEGEALGLGAMY 99 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~~~~~~~~E~~~l~~L~ 99 (326)
.+...+-++.|.++.||+... +++.+.+|..-++. ..-..|.++|+.+.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-r~knrEl~im~~l~ 75 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-RYKNRELQIMRKLD 75 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-CcCcHHHHHHHhcC
Confidence 345667789999999999765 34578888765432 23346888888443
No 441
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=93.57 E-value=0.042 Score=46.79 Aligned_cols=28 Identities=25% Similarity=0.327 Sum_probs=25.6
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
...+||.|.+|+|||++.+|++-|.||.
T Consensus 167 kL~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 167 KLSVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred HhhhhhccCCcceEEEccCCcEEEcccc
Confidence 5689999999999999999999999985
No 442
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=92.92 E-value=0.91 Score=44.47 Aligned_cols=71 Identities=20% Similarity=0.203 Sum_probs=41.8
Q ss_pred CCcceeecCCCCCCeeecCCCCeEEEccc-c-ccCchhhhhhhhhhcC---CChHhHHHhhhhCCCCcCHHHHHHHHH
Q 020393 222 VEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEAEFGMSWCAG---FGGSFYNSYFEVMPKQPGFEKRRDLYM 294 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~-~~G~~~~Dla~~~~~~---~~~~fl~~Y~~~~~l~~~~~~r~~~y~ 294 (326)
....+||+||+..|+|++.+...-|-|++ + .+..-..+ ..+|+. -.++++.+-....|-.+-|-...-+|.
T Consensus 172 H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~l--qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~ 247 (596)
T KOG0586|consen 172 HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLML--QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYA 247 (596)
T ss_pred hhcceeccccchhhcccccccceeeeccccceeecccccc--cccCCCCCccChHhhcCcccCCcceehhhhhhhhee
Confidence 35689999999999999988767788863 3 22211111 113422 124566555544554455655555554
No 443
>PHA02882 putative serine/threonine kinase; Provisional
Probab=92.87 E-value=0.059 Score=48.53 Aligned_cols=27 Identities=33% Similarity=0.416 Sum_probs=24.0
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.|||+++++.+.|+||.
T Consensus 145 ~~iiHrDiKp~Nill~~~~~~~l~DFG 171 (294)
T PHA02882 145 HGISHGDIKPENIMVDGNNRGYIIDYG 171 (294)
T ss_pred CCeecCCCCHHHEEEcCCCcEEEEEcC
Confidence 379999999999999988778899974
No 444
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=92.58 E-value=0.43 Score=41.34 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=48.6
Q ss_pred EeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--C---------------
Q 020393 54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P--------------- 116 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~--------------- 116 (326)
+...++|..-.+..++++++.+|+|..+.. ..|.-. ..|+...++|+|+.--.... +
T Consensus 4 ~i~~s~s~~~~~~F~~s~~~a~ViK~s~ti-----~~E~~~-~~La~~LgVpiPq~rvi~~~~~E~~e~~~~L~~a~~~~ 77 (238)
T cd05124 4 AIDLSDSGVFGALFVESESGAIVVKSSPNI-----ASEYFL-SKLAKILGLPIPQMRVLEWNSSEFTEMSENLLKASSED 77 (238)
T ss_pred EEEecCCceEEEEEEcCCCcEEEEEcCccH-----HHHHHH-HHHHHHhCCCCCceeeeecCCHHHHHHHHHHHHHHhcc
Confidence 344566666667778888889999998642 344432 34566678999986543221 0
Q ss_pred -----------CCceEEEEeeecCCCC
Q 020393 117 -----------TGGSYIIMEFIEFGSS 132 (326)
Q Consensus 117 -----------~~~~~~v~e~l~G~~~ 132 (326)
....+++|||++|.++
T Consensus 78 ~~~~~~i~~el~~~~flimeYv~G~~l 104 (238)
T cd05124 78 ECLERRITLELEKAYLLIMEYVPGITL 104 (238)
T ss_pred hhHHHHHHHHHhhhheeeeeecCCccc
Confidence 1237999999999986
No 445
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=92.47 E-value=0.73 Score=41.09 Aligned_cols=77 Identities=12% Similarity=0.136 Sum_probs=39.9
Q ss_pred ceeeEeEeCCc-cccceEEEEeCCc----cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc---------
Q 020393 50 HITKICPVGGG-CINLASRYGTDAG----SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--------- 115 (326)
Q Consensus 50 ~v~~v~~l~~G-~~n~~y~v~~~~~----~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--------- 115 (326)
.+.++.....| ..+.+|.|.+.++ .+|+|..+. +..|.-. ..|+...++|+|..--....
T Consensus 26 ~l~sv~~s~~g~ns~gv~fv~~f~~~~~~avViK~s~t-----~~~E~~~-s~La~~Lgv~~P~~Rii~~~~~E~~e~~~ 99 (275)
T PF09192_consen 26 SLSSVHHSEHGVNSGGVFFVATFSGSKEEAVVIKFSST-----IQQEVFA-SELARWLGVPTPQMRIIESSSSEFQEMSE 99 (275)
T ss_dssp -CCCEEEEEE-STTS-EEEEEETTE----EEEEE--TT-----HHHHHHH-HHHHHHCT-----EEEEESSSHHHHHHHH
T ss_pred HhhhHHhhccccCCCCEEEEEEcCCCceEEEEEecCCc-----hHHHHHH-HHHHHHhCCCCCceeeeecCCHHHHHHHH
Confidence 46677777666 3456777777766 799999864 4445443 45666678999875532211
Q ss_pred ---------C----------CCceEEEEeeecCCCC
Q 020393 116 ---------P----------TGGSYIIMEFIEFGSS 132 (326)
Q Consensus 116 ---------~----------~~~~~~v~e~l~G~~~ 132 (326)
+ +...+++|||++|.++
T Consensus 100 ~l~~a~~~~~~l~~~i~~el~~a~~liMeyv~G~~L 135 (275)
T PF09192_consen 100 ALLFATSNDDELGDFICSELDKAFFLIMEYVPGKPL 135 (275)
T ss_dssp HHH----HH-SSS-HHHHHCT-SEEEEEE---EEES
T ss_pred HHHhhcccchHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 0 2356999999999876
No 446
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=92.31 E-value=1.9 Score=42.44 Aligned_cols=74 Identities=12% Similarity=0.034 Sum_probs=45.5
Q ss_pred eeeEeEeCCccccceEEEEeCCc--cEEEEecCCC---------C--cchHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393 51 ITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI---------G--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT 117 (326)
Q Consensus 51 v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~---------~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~ 117 (326)
-+.++++|.|....|+.-..... .+|+|.-... + ...+-.|.++|..|.++.--.+-+++..-+. +
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd-d 641 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED-D 641 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec-C
Confidence 46788999999999988776554 5778876431 1 1224468999999986522223333332221 3
Q ss_pred CceEEEEe
Q 020393 118 GGSYIIME 125 (326)
Q Consensus 118 ~~~~~v~e 125 (326)
+..|++||
T Consensus 642 d~yyl~te 649 (772)
T KOG1152|consen 642 DYYYLETE 649 (772)
T ss_pred CeeEEEec
Confidence 45555554
No 447
>PF13575 DUF4135: Domain of unknown function (DUF4135)
Probab=91.98 E-value=1.8 Score=40.61 Aligned_cols=95 Identities=20% Similarity=0.152 Sum_probs=54.4
Q ss_pred ceeeEeE-eCCccc--cceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcC-----CCCCcceeeecccCCCce
Q 020393 50 HITKICP-VGGGCI--NLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETR-----TIRAPRPFKVGALPTGGS 120 (326)
Q Consensus 50 ~v~~v~~-l~~G~~--n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~-----~~~vP~~~~~~~~~~~~~ 120 (326)
++++++. .+.-.. ..|.+|+.++| ++|-|--+-.....+ .++++++.+.. .+|+|+++..+ ..
T Consensus 44 ~i~~I~~~~GD~H~~Gr~V~~l~f~~g~kivYKPRsl~~d~~f---~~l~~~ln~~~~~~~~~l~~~~~l~~g-----~~ 115 (370)
T PF13575_consen 44 KITSIEFGLGDTHNGGRSVAILEFSSGKKIVYKPRSLSIDKAF---NDLLEWLNEKNGTPSLDLPTPKVLDRG-----DG 115 (370)
T ss_pred CceEecCCCCCcCCCCceEEEEEECCCCEEEEeCcccHHHHHH---HHHHHHHhhhccccccccccceeeecc-----Cc
Confidence 5566554 222222 36888888887 777776543222222 45567776653 24555666433 23
Q ss_pred EEEEeeecCCCCC------CcHHHHHHHHHHHhhcCCC
Q 020393 121 YIIMEFIEFGSSR------GNQSVFGKKLAEMHKAGKS 152 (326)
Q Consensus 121 ~~v~e~l~G~~~~------~~~~~lg~~La~lH~~~~~ 152 (326)
|.-+||++-.+.. ..-+++|..||-+|.....
T Consensus 116 YgW~EfI~~~~c~~~~ev~~yY~r~G~llal~y~L~~~ 153 (370)
T PF13575_consen 116 YGWQEFIEHEPCNSEEEVERYYYRLGVLLALLYLLNGT 153 (370)
T ss_pred ceeEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6677888876552 2235667777766666653
No 448
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=91.22 E-value=0.14 Score=45.15 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=28.8
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEccc--cccCchhh
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDPA--CYYGHNEA 258 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~--~~~G~~~~ 258 (326)
..-++|.|++|+|+|+.++|..-|=||. ..+|.|-.
T Consensus 119 ~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 119 SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 3468999999999999999988999974 35775543
No 449
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=91.16 E-value=0.14 Score=50.10 Aligned_cols=28 Identities=32% Similarity=0.340 Sum_probs=23.3
Q ss_pred CcceeecCCCCCCeeec-CCCCeEEEccc
Q 020393 223 EPCLLHGDLWSGNISSD-KNGEPVILDPA 250 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~-~~~~~~iID~~ 250 (326)
..+++|+||||+|||++ ..+..-|+||.
T Consensus 433 ~~gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 433 EQGVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred hcCeeecCCChhheeecCCCCcEEEEEec
Confidence 46999999999999995 55667899963
No 450
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=90.95 E-value=0.17 Score=44.91 Aligned_cols=28 Identities=25% Similarity=0.297 Sum_probs=23.7
Q ss_pred CCcceeecCCCCCCeeecCCCCeEEEcc
Q 020393 222 VEPCLLHGDLWSGNISSDKNGEPVILDP 249 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~ 249 (326)
...++||.|++|.|||+|+.|+.-+.||
T Consensus 209 eKH~viHRDvKPSNILlDe~GniKlCDF 236 (391)
T KOG0983|consen 209 EKHGVIHRDVKPSNILLDERGNIKLCDF 236 (391)
T ss_pred HhcceeecccCccceEEccCCCEEeecc
Confidence 4679999999999999998887666665
No 451
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=90.46 E-value=0.97 Score=42.97 Aligned_cols=73 Identities=19% Similarity=0.112 Sum_probs=47.0
Q ss_pred EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC--CCc-eEEE
Q 020393 54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGG-SYII 123 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~-~~~v 123 (326)
++.+|.|.+..++.+... +..||+|.-.-. .+.....|..++.. +.-|-++.+.+.. ++. -+++
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~------~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSK------LLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHh------ccCCCeeeeccchhcCCceEEEE
Confidence 345677888877777643 347999876431 12233456555443 4468888776543 455 8999
Q ss_pred EeeecCCCC
Q 020393 124 MEFIEFGSS 132 (326)
Q Consensus 124 ~e~l~G~~~ 132 (326)
|+|++|+++
T Consensus 83 m~Y~eGg~l 91 (426)
T KOG0589|consen 83 MEYCEGGDL 91 (426)
T ss_pred EeecCCCCH
Confidence 999999865
No 452
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.13 E-value=1.7 Score=41.69 Aligned_cols=49 Identities=14% Similarity=-0.002 Sum_probs=32.7
Q ss_pred eEeEeCCccccceEEEEeCCc-cEE-EEecCCCC--cchHHHHHHHHHHHHhc
Q 020393 53 KICPVGGGCINLASRYGTDAG-SFF-VKTNRSIG--PSMFEGEALGLGAMYET 101 (326)
Q Consensus 53 ~v~~l~~G~~n~~y~v~~~~~-~~v-lK~~~~~~--~~~~~~E~~~l~~L~~~ 101 (326)
-+++++=|.+++||.-....+ +|| +|+....+ .+.-.-|..+|+.+++.
T Consensus 82 v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~ 134 (590)
T KOG1290|consen 82 VQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREG 134 (590)
T ss_pred EEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhc
Confidence 466788888999999866544 554 47765421 12234688889988875
No 453
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=89.80 E-value=0.67 Score=45.38 Aligned_cols=71 Identities=20% Similarity=0.235 Sum_probs=49.8
Q ss_pred ceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--CCCceEEEEeee
Q 020393 50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--PTGGSYIIMEFI 127 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~~~~~~~v~e~l 127 (326)
+|.+++.++.|....||+-...+..+.||..+. +-+.+. ++|++ +.-|.++.+... +..-.++||||+
T Consensus 125 ~IsELeWlGSGaQGAVF~Grl~netVAVKKV~e----lkETdI---KHLRk---LkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 125 EISELEWLGSGAQGAVFLGRLHNETVAVKKVRE----LKETDI---KHLRK---LKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred HhhhhhhhccCcccceeeeeccCceehhHHHhh----hhhhhH---HHHHh---ccCcceeeEeeeecCCceeEEeeecc
Confidence 678888999999999999888888888876532 223343 45553 346777776532 246789999999
Q ss_pred cCC
Q 020393 128 EFG 130 (326)
Q Consensus 128 ~G~ 130 (326)
+-+
T Consensus 195 a~G 197 (904)
T KOG4721|consen 195 AQG 197 (904)
T ss_pred ccc
Confidence 744
No 454
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=89.45 E-value=0.46 Score=41.42 Aligned_cols=29 Identities=24% Similarity=0.212 Sum_probs=23.5
Q ss_pred CCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 222 VEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..+.+||.|++|.|+|.+.++..-|=||.
T Consensus 141 h~k~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 141 HLKRVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred ccCCcccCCCCHHHhccCCCCCeeccCCC
Confidence 46789999999999999877766666643
No 455
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=89.25 E-value=0.21 Score=44.32 Aligned_cols=39 Identities=31% Similarity=0.280 Sum_probs=30.4
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEcc-c-cc--cCchhhhhh
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDP-A-CY--YGHNEAEFG 261 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~-~-~~--~G~~~~Dla 261 (326)
...++|.||+|.|||++++.+..|-|| . |. -|....||-
T Consensus 141 a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelC 183 (411)
T KOG0599|consen 141 ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELC 183 (411)
T ss_pred HhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhc
Confidence 357999999999999998877889996 3 32 566666763
No 456
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=89.24 E-value=3 Score=38.36 Aligned_cols=69 Identities=12% Similarity=0.168 Sum_probs=44.7
Q ss_pred eEeCCccccceEEEEe--CCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC-ceEEEEeee
Q 020393 55 CPVGGGCINLASRYGT--DAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIMEFI 127 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~-~~~~v~e~l 127 (326)
.+|+.|.+...|.-+- .+..+.+|+-+.. ...+++-|++.++.|.. ..-+|.+|+++. +| .-.+|++-|
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g--~~GIP~vYYFGq--eG~~NiLVidLL 106 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGG--TEGIPQVYYFGQ--EGKYNILVIDLL 106 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcC--CCCCCceeeecc--ccchhhhhhhhh
Confidence 3466776555444221 3446778988753 34568889999999985 356899999986 34 345555543
No 457
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=87.69 E-value=0.49 Score=50.01 Aligned_cols=28 Identities=29% Similarity=0.261 Sum_probs=24.7
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++||.||+|.||++++++.+-|.||.
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFG 742 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFG 742 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccc
Confidence 4569999999999999988878899974
No 458
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=87.42 E-value=0.3 Score=48.82 Aligned_cols=138 Identities=21% Similarity=0.178 Sum_probs=79.0
Q ss_pred ceeeEeEeCCccccceEEEEeC--Cc---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393 50 HITKICPVGGGCINLASRYGTD--AG---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 120 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~--~~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 120 (326)
+|+-.+.++.|.+..|+|-+.+ +| .+-||+-+.+. ...|..|+..+..|... .+-++|+.-. +...
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~---hliRLyGvVl--~qp~ 185 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHP---HLIRLYGVVL--DQPA 185 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCc---ceeEEeeeec--cchh
Confidence 4555667889999999997764 34 57788876542 34577888877666532 2333443321 1222
Q ss_pred EEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCCh
Q 020393 121 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 200 (326)
Q Consensus 121 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~ 200 (326)
-+|+|- ..+|..|.+||+.... .| .. .++-.+.
T Consensus 186 mMV~EL----------aplGSLldrLrka~~~--~l------------------------lv-~~Lcdya---------- 218 (1039)
T KOG0199|consen 186 MMVFEL----------APLGSLLDRLRKAKKA--IL------------------------LV-SRLCDYA---------- 218 (1039)
T ss_pred hHHhhh----------cccchHHHHHhhcccc--ce------------------------eH-HHHHHHH----------
Confidence 333333 3456779999994331 11 00 0111111
Q ss_pred HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 201 ~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
.++...++ +| ...++||.||-..|+|+-....+-|-||.
T Consensus 219 ---~QiA~aM~----YL----eskrlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 219 ---MQIAKAMQ----YL----ESKRLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred ---HHHHHHHH----HH----hhhhhhhhhhhhhhheecccceeeeeccc
Confidence 11111111 23 24589999999999999765556788974
No 459
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=87.24 E-value=0.36 Score=41.87 Aligned_cols=31 Identities=39% Similarity=0.574 Sum_probs=27.0
Q ss_pred CCCcceeecCCCCCCeeecCCCCeEEEcccc
Q 020393 221 NVEPCLLHGDLWSGNISSDKNGEPVILDPAC 251 (326)
Q Consensus 221 ~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~ 251 (326)
......+|||..|.||+.|+.|-.-++|+.|
T Consensus 159 ~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 159 SENQHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred ccCCCeecCCCChhheeecCCCCEEecChhh
Confidence 3567899999999999999999889999743
No 460
>PLN00181 protein SPA1-RELATED; Provisional
Probab=86.40 E-value=0.8 Score=47.57 Aligned_cols=27 Identities=0% Similarity=0.022 Sum_probs=22.5
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEcc
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDP 249 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~ 249 (326)
...+||+|++|.|||++..+...++|+
T Consensus 98 ~~gIvHrDlKP~NiLl~~~~~~k~~d~ 124 (793)
T PLN00181 98 SQGIVVHNVRPSCFVMSSFNHVSFIES 124 (793)
T ss_pred hCCeeeccCCchhEEEcccCcEEEeec
Confidence 457999999999999987666677775
No 461
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=85.67 E-value=0.61 Score=43.70 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=25.8
Q ss_pred CcceeecCCCCCCeeec--CCCCe--EEEccccccCchh
Q 020393 223 EPCLLHGDLWSGNISSD--KNGEP--VILDPACYYGHNE 257 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~--~~~~~--~iID~~~~~G~~~ 257 (326)
..++-|.|++.+|||++ +|+.+ +|-||.|+.+|-.
T Consensus 359 ~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~ 397 (598)
T KOG4158|consen 359 KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDN 397 (598)
T ss_pred HccchhhcccccceEEEecCCCCcEEEEcccceeeeccc
Confidence 56899999999999996 45554 5667866655543
No 462
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=85.02 E-value=0.58 Score=41.14 Aligned_cols=27 Identities=22% Similarity=0.211 Sum_probs=23.2
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..++|+|++|.||++++++...+.|+.
T Consensus 132 ~~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 132 KNFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred CCEeecccchhhEEEcCCCCEEECccc
Confidence 369999999999999887777888963
No 463
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=84.56 E-value=0.59 Score=42.24 Aligned_cols=43 Identities=23% Similarity=0.324 Sum_probs=33.1
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEcc-cc----ccCchhhhhhhh-hh
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDP-AC----YYGHNEAEFGMS-WC 265 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~-~~----~~G~~~~Dla~~-~~ 265 (326)
.-..||.|++|.|||+..+++.-+.|| .+ .-|+..-|-... |+
T Consensus 119 k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWY 167 (396)
T KOG0593|consen 119 KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWY 167 (396)
T ss_pred hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhc
Confidence 345999999999999999998999996 33 256667776554 54
No 464
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=84.33 E-value=0.57 Score=41.57 Aligned_cols=28 Identities=29% Similarity=0.401 Sum_probs=24.0
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
..-+||.|++|.|||++..|-.-+.||.
T Consensus 186 ~lkiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 186 ELKIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred HhhhhhccCChhheEEecCCCEeeeccc
Confidence 4578999999999999988877888874
No 465
>PHA00451 protein kinase
Probab=84.33 E-value=0.78 Score=40.49 Aligned_cols=32 Identities=41% Similarity=0.601 Sum_probs=24.8
Q ss_pred ecCCCCCCeeecCCCCeEEEccccccCchhhh
Q 020393 228 HGDLWSGNISSDKNGEPVILDPACYYGHNEAE 259 (326)
Q Consensus 228 HgDl~~~NiL~~~~~~~~iID~~~~~G~~~~D 259 (326)
--|.|+|||++++++.+.|-|+-++..|...+
T Consensus 192 SFDmHSGNiMf~~~g~p~ITDPVSFS~dr~re 223 (362)
T PHA00451 192 SFDMHSGNIMFDQDGVPYITDPVSFSHDRERE 223 (362)
T ss_pred cccccCCceeeCCCCCeEecCCccccCccccC
Confidence 34999999999999999999976555444443
No 466
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=83.92 E-value=0.67 Score=41.86 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=23.6
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEccc--cccCchhh
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDPA--CYYGHNEA 258 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~--~~~G~~~~ 258 (326)
..+++|||+++.|++++++|...+=|+. ...|....
T Consensus 163 ~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~ 200 (288)
T PF14531_consen 163 SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR 200 (288)
T ss_dssp HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEE
T ss_pred hcceEecccceeeEEEcCCCCEEEcChHHHeecCceee
Confidence 4589999999999999999877777763 24565544
No 467
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=83.86 E-value=0.63 Score=41.40 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=24.1
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
...++|.|++|||+|+..+-+..|.||.
T Consensus 174 sA~ILHRDIKPGNLLVNSNCvLKICDFG 201 (449)
T KOG0664|consen 174 TANILHRDIKPGNLLVNSNCILKICDFG 201 (449)
T ss_pred hcchhhccCCCccEEeccCceEEecccc
Confidence 4589999999999999877667889975
No 468
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=83.59 E-value=1.1 Score=41.21 Aligned_cols=33 Identities=21% Similarity=0.218 Sum_probs=27.1
Q ss_pred CCcceeecCCCCCCeeecCCCCeEEEccc-cccC
Q 020393 222 VEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYG 254 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G 254 (326)
....++|.||+|+|++++.+-...|.||. +...
T Consensus 142 HSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 142 HSANVIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred hcccccccccchhheeeccCCCEEeccccceeec
Confidence 45689999999999999988778999984 4433
No 469
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.99 E-value=7.4 Score=35.39 Aligned_cols=68 Identities=18% Similarity=0.104 Sum_probs=45.3
Q ss_pred hcccccCCCCCcceeecCCCCCCeeecCC--CCe--EEEcc-ccccCchhhhhhhhh--h------cCCC--------hH
Q 020393 213 LAPLFEGVNVEPCLLHGDLWSGNISSDKN--GEP--VILDP-ACYYGHNEAEFGMSW--C------AGFG--------GS 271 (326)
Q Consensus 213 ~~~~l~~~~~~~~LiHgDl~~~NiL~~~~--~~~--~iID~-~~~~G~~~~Dla~~~--~------~~~~--------~~ 271 (326)
.+..++ ..|.+|+-||+|.+|+=--.+ |.+ -|=|| +...|.+.+||..+. + .+++ +.
T Consensus 49 ~p~~lp--~~p~tw~cGD~HLgN~ga~~~~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a~Rs~~L~d~d~~~~~~~ 126 (410)
T COG4320 49 WPWSLP--KTPFTWLCGDAHLGNFGAARNSKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVLAGRSNGLNDADIEKAIKI 126 (410)
T ss_pred CccccC--CCCceEEecccccccchhhccCCCceEEEecccchhhccchHHHHHHHHHHHHHHhhccCCCchhHHHHHHH
Confidence 443444 468899999999999865443 322 23456 478999999998652 1 2333 36
Q ss_pred hHHHhhhhCCC
Q 020393 272 FYNSYFEVMPK 282 (326)
Q Consensus 272 fl~~Y~~~~~l 282 (326)
|+++|....+.
T Consensus 127 ~v~~Y~~Aa~s 137 (410)
T COG4320 127 MVQAYKMAAFS 137 (410)
T ss_pred HHHHHHHhhcc
Confidence 89999655544
No 470
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=82.71 E-value=1.3 Score=41.64 Aligned_cols=73 Identities=23% Similarity=0.244 Sum_probs=46.1
Q ss_pred CCcceeecCCCCCCeeecCCCCeEEEcccc--ccCchhhhhhhhhhcC---CChHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393 222 VEPCLLHGDLWSGNISSDKNGEPVILDPAC--YYGHNEAEFGMSWCAG---FGGSFYNSYFEVMPKQPGFEKRRDLYMLY 296 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~~--~~G~~~~Dla~~~~~~---~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~ 296 (326)
..-+++|.||+..|||+|.++..-|-||.. .|.+-- +-...|+. -.+.+++|---..|.-+.|.--+.+|.|.
T Consensus 170 HknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLV 247 (668)
T KOG0611|consen 170 HKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLV 247 (668)
T ss_pred hhccceecccchhheeecCCCCeeeeccchhhhhcccc--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHh
Confidence 355899999999999999988888988742 222221 11123432 13566666433356667887767777654
No 471
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=82.61 E-value=0.92 Score=43.93 Aligned_cols=28 Identities=21% Similarity=0.202 Sum_probs=23.2
Q ss_pred CcceeecCCCCCCeeecCCC-CeEEEccc
Q 020393 223 EPCLLHGDLWSGNISSDKNG-EPVILDPA 250 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~-~~~iID~~ 250 (326)
...++|.|++|+||||.++. +.-|.||.
T Consensus 554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfG 582 (752)
T KOG0670|consen 554 KCGVLHADIKPDNILVNESKNILKLCDFG 582 (752)
T ss_pred hcCeeecccCccceEeccCcceeeeccCc
Confidence 45899999999999998764 35789985
No 472
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=82.38 E-value=0.64 Score=43.96 Aligned_cols=25 Identities=24% Similarity=0.262 Sum_probs=19.1
Q ss_pred cceeecCCCCCCeeecCCC----CeEEEc
Q 020393 224 PCLLHGDLWSGNISSDKNG----EPVILD 248 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~----~~~iID 248 (326)
.-++|+|+|||||++.... ..+++|
T Consensus 364 DNFvHaDlHPGNVlirf~~t~~~~~~~~~ 392 (565)
T KOG1236|consen 364 DNFVHADLHPGNVLIRFNKTEDNLRGVHK 392 (565)
T ss_pred hcceecccCCCcEEEEecCCCcccccccc
Confidence 3689999999999997542 246666
No 473
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=82.36 E-value=1.7 Score=39.62 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=26.7
Q ss_pred CCcceeecCCCCCCeeecCCCCeEEEccc-cccCch
Q 020393 222 VEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHN 256 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G~~ 256 (326)
...+++|.||+|.||++..+...-|.|+. +...++
T Consensus 135 hs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 135 HSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred HhcceeecccCcccceecchhheeeccchhhcccCc
Confidence 35699999999999999877767788873 443333
No 474
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=81.34 E-value=2.7 Score=39.34 Aligned_cols=83 Identities=14% Similarity=0.111 Sum_probs=47.2
Q ss_pred CCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh------hcCCChHhHHHhhhhCCC-CcCH---HHHH
Q 020393 222 VEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW------CAGFGGSFYNSYFEVMPK-QPGF---EKRR 290 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~------~~~~~~~fl~~Y~~~~~l-~~~~---~~r~ 290 (326)
...-+-|.|++-+|||++ +|..-+||+ ++...-+--++.... +.|-.+-=++-|+..+.+ .-.| +.+.
T Consensus 339 kkf~fehrnlt~~niLId-~GnvtLIDfklsRl~~~q~~isy~rldhp~lF~G~dd~QFeIYrlMr~l~~g~wa~F~P~T 417 (488)
T COG5072 339 KKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLSYSQGIISYNRLDHPDLFNGVDDYQFEIYRLMRRLLKGRWAQFEPIT 417 (488)
T ss_pred hcCCcccccccccceeee-cCceEEEEeeeeecccCCceeeccccCchhhhcCccceeeeHHHHHHHHhcCcHHhcccch
Confidence 456788999999999998 667889998 444333333333221 122222124556555432 2333 5566
Q ss_pred HHHHHHHHHHHHHHh
Q 020393 291 DLYMLYHYLNHYNLF 305 (326)
Q Consensus 291 ~~y~l~~~l~~~~~~ 305 (326)
.++.|+.+.....-+
T Consensus 418 NvlWL~yLs~~llkk 432 (488)
T COG5072 418 NVLWLYYLSHQLLKK 432 (488)
T ss_pred hhHHHHHHHHHHHhh
Confidence 677666554333333
No 475
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=79.81 E-value=10 Score=31.83 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393 90 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132 (326)
Q Consensus 90 ~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 132 (326)
.|.-+++.+... . ++|++++.. +.+++.|++...++
T Consensus 8 ~E~lll~~l~~~-~-~~pk~lG~C-----G~~~v~E~~~~~~~ 43 (188)
T PF12260_consen 8 NEPLLLQLLQGS-E-PFPKLLGSC-----GRFYVVEYVGAGSL 43 (188)
T ss_pred cHHHHHHHcCCC-C-CCCCeeeEC-----CCEEEEEeecCccc
Confidence 578888888764 3 999999986 44888899986544
No 476
>PF07805 HipA_N: HipA-like N-terminal domain; InterPro: IPR012894 The members of this entry contain a region that is found towards the N terminus of the HipA protein expressed by various bacterial species (for example P23874 from SWISSPROT). This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis []. When expressed alone, it is toxic to bacterial cells [], but it is usually tightly associated with HipB [], and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products []. ; PDB: 2WIU_C 3HZI_A 3DNT_B 3FBR_A 3DNU_A 3DNV_A.
Probab=79.66 E-value=8.7 Score=27.29 Aligned_cols=51 Identities=18% Similarity=0.147 Sum_probs=30.3
Q ss_pred cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393 74 SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 127 (326)
Q Consensus 74 ~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 127 (326)
.+|+|..... .......|...++..++ .+++||..-.... .+..+++.++.
T Consensus 28 ~~IvK~~~~~~~~~~~~nE~~~~~lA~~-~Gi~v~~~~l~~~--~~~~~l~v~RF 79 (81)
T PF07805_consen 28 THIVKFPSSRDDPDLVENEYACMRLARA-AGIPVPETRLIRF--GDRPALAVERF 79 (81)
T ss_dssp SEEEE-S-CEEETTHHHHHHHHHHHHHH-TT-----EEEEEE--TTEEEEEEE-T
T ss_pred eEEEeCCCcccccchHHHHHHHHHHHHH-cCCCcCceEEEEE--CCeEEEEEeCC
Confidence 8999998865 56677889988886665 5899998776443 24667776654
No 477
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=79.04 E-value=5.9 Score=40.45 Aligned_cols=79 Identities=16% Similarity=0.105 Sum_probs=53.2
Q ss_pred ceeeEeEeCCccccceEEEEeCCc-------cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393 50 HITKICPVGGGCINLASRYGTDAG-------SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 118 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~~~-------~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 118 (326)
.+.-++.+++|.+..||.-...+. -+.||.-... .+..|++|++++..|... .|-++++.... +.
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~---nIVrLlGVC~~-~~ 562 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHP---NIVRLLGVCRE-GD 562 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCC---CeEEEEEEEcc-CC
Confidence 455566789999999999765322 2444654432 245688999888877643 46777776543 45
Q ss_pred ceEEEEeeecCCCC
Q 020393 119 GSYIIMEFIEFGSS 132 (326)
Q Consensus 119 ~~~~v~e~l~G~~~ 132 (326)
..++|+||..-+++
T Consensus 563 P~~MvFEYm~~GDL 576 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDL 576 (774)
T ss_pred eeEEEEEecccccH
Confidence 78999999986543
No 478
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=78.01 E-value=10 Score=40.41 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=30.0
Q ss_pred HHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCC
Q 020393 38 IREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRS 82 (326)
Q Consensus 38 i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~ 82 (326)
...++... .+ ++.-++-++.+-+=.+.|-.+++|.+|+|.+-.
T Consensus 14 ~e~yfsd~-~~-e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk 56 (1431)
T KOG1240|consen 14 VEVYFSDL-SV-ECHYVENLGSTRFLKVARAKDREGLVVVKVFVK 56 (1431)
T ss_pred HHHHhhcC-cc-ceeeecccCchhhhhhhhccCCCceEEEEEEec
Confidence 45566655 22 566666677666667888888889889998854
No 479
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=75.34 E-value=20 Score=38.16 Aligned_cols=79 Identities=23% Similarity=0.228 Sum_probs=49.1
Q ss_pred ceeeEeEeCCccccceEEEEeCC--cc-----EEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393 50 HITKICPVGGGCINLASRYGTDA--GS-----FFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 118 (326)
Q Consensus 50 ~v~~v~~l~~G~~n~~y~v~~~~--~~-----~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 118 (326)
.|+-...++.|.+..||+-+..+ +. +-+|--+.. + ...|-.|+.++..+.. -.|-++++..-. .+
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~H---pNiv~liGv~l~-~~ 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDH---PNIVSLIGVCLD-SG 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC---cceeeEEEeecC-CC
Confidence 45566778999999999977642 32 333332221 1 2334456655554432 235556665544 67
Q ss_pred ceEEEEeeecCCCC
Q 020393 119 GSYIIMEFIEFGSS 132 (326)
Q Consensus 119 ~~~~v~e~l~G~~~ 132 (326)
..++++||.+|+++
T Consensus 769 ~~~i~leyM~gGDL 782 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDL 782 (1025)
T ss_pred CcEEEehhcccCcH
Confidence 89999999999876
No 480
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=75.09 E-value=5 Score=35.54 Aligned_cols=65 Identities=15% Similarity=0.028 Sum_probs=38.7
Q ss_pred cceeecCCCCCCeeecCCCCeEEEccc-c-ccC--chhhhhhhh----hhcCCChHhHHHhhhhCCCCcCHHH
Q 020393 224 PCLLHGDLWSGNISSDKNGEPVILDPA-C-YYG--HNEAEFGMS----WCAGFGGSFYNSYFEVMPKQPGFEK 288 (326)
Q Consensus 224 ~~LiHgDl~~~NiL~~~~~~~~iID~~-~-~~G--~~~~Dla~~----~~~~~~~~fl~~Y~~~~~l~~~~~~ 288 (326)
--++|.|+++.|+|++.|+...|-||. + .+. +...-=.+. .+.-.+.+.+=||++..+.-+-|-.
T Consensus 143 ~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgA 215 (376)
T KOG0669|consen 143 NKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGA 215 (376)
T ss_pred hhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhH
Confidence 468999999999999999988888863 3 111 000000000 0011346778888877665444543
No 481
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=74.58 E-value=10 Score=36.40 Aligned_cols=102 Identities=21% Similarity=0.238 Sum_probs=61.7
Q ss_pred chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCccc
Q 020393 86 SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIG 165 (326)
Q Consensus 86 ~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~ 165 (326)
.+...|..+|+.+.. ++.|.--|++.. .+.-++|+.-..|+++ ++|-.....++| +
T Consensus 230 ~maLnEk~iL~kV~s--~FiVslaYAfeT--kd~LClVLtlMNGGDL------------kfHiyn~g~~gF--~------ 285 (591)
T KOG0986|consen 230 TMALNEKQILEKVSS--PFIVSLAYAFET--KDALCLVLTLMNGGDL------------KFHIYNHGNPGF--D------ 285 (591)
T ss_pred HHhhHHHHHHHHhcc--CcEEEEeeeecC--CCceEEEEEeecCCce------------eEEeeccCCCCC--c------
Confidence 344567888887764 455555555433 4677999999999887 566555432222 1
Q ss_pred ccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeE
Q 020393 166 STPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPV 245 (326)
Q Consensus 166 ~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~ 245 (326)
+.-..||..+ .+--+ ..+ ....+|-.||+|.|||+|+.|..-
T Consensus 286 ---------e~ra~FYAAE--------------------i~cGL----ehl-----H~~~iVYRDLKPeNILLDd~GhvR 327 (591)
T KOG0986|consen 286 ---------EQRARFYAAE--------------------IICGL----EHL-----HRRRIVYRDLKPENILLDDHGHVR 327 (591)
T ss_pred ---------hHHHHHHHHH--------------------HHhhH----HHH-----HhcceeeccCChhheeeccCCCeE
Confidence 1112333221 11111 111 234788889999999999999887
Q ss_pred EEcc
Q 020393 246 ILDP 249 (326)
Q Consensus 246 iID~ 249 (326)
|-|.
T Consensus 328 ISDL 331 (591)
T KOG0986|consen 328 ISDL 331 (591)
T ss_pred eecc
Confidence 8773
No 482
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=74.22 E-value=9.1 Score=38.29 Aligned_cols=73 Identities=22% Similarity=0.155 Sum_probs=41.6
Q ss_pred EeCCccccceEEEEeCCc--cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393 56 PVGGGCINLASRYGTDAG--SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 131 (326)
Q Consensus 56 ~l~~G~~n~~y~v~~~~~--~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 131 (326)
.++||+...||.-....- .+.||.-..+. ...|-+|+++++-++.- ..-++++.... +...|+|.||..-++
T Consensus 274 KLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHp---NLVqLLGVCT~-EpPFYIiTEfM~yGN 349 (1157)
T KOG4278|consen 274 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP---NLVQLLGVCTH-EPPFYIITEFMCYGN 349 (1157)
T ss_pred ccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCc---cHHHHhhhhcc-CCCeEEEEecccCcc
Confidence 367788888877443211 23344433332 23466788888777531 23344444432 568899999987554
Q ss_pred C
Q 020393 132 S 132 (326)
Q Consensus 132 ~ 132 (326)
+
T Consensus 350 L 350 (1157)
T KOG4278|consen 350 L 350 (1157)
T ss_pred H
Confidence 3
No 483
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=73.62 E-value=2.3 Score=38.67 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=43.9
Q ss_pred eEeCCccccceEEEE-eCC-c----cEEEEecCCC----Cc-chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393 55 CPVGGGCINLASRYG-TDA-G----SFFVKTNRSI----GP-SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 123 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~-~~~-~----~~vlK~~~~~----~~-~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 123 (326)
..++.|+...||+-. ++. + .|.+|..... .. ....+|..+++.|....-+...+++... +..-|++
T Consensus 30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---d~~v~l~ 106 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---DKKVWLL 106 (438)
T ss_pred ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---CceEEEE
Confidence 457889999999973 321 1 4666665432 11 1134788888888754223344444332 4688999
Q ss_pred EeeecC
Q 020393 124 MEFIEF 129 (326)
Q Consensus 124 ~e~l~G 129 (326)
++|.+-
T Consensus 107 fdYAEh 112 (438)
T KOG0666|consen 107 FDYAEH 112 (438)
T ss_pred ehhhhh
Confidence 999874
No 484
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=72.02 E-value=2.5 Score=42.17 Aligned_cols=28 Identities=29% Similarity=0.395 Sum_probs=23.2
Q ss_pred CcceeecCCCCCCeeecCCCCeEEEccc
Q 020393 223 EPCLLHGDLWSGNISSDKNGEPVILDPA 250 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~ 250 (326)
...+||.||+.||||++-||..-+-||.
T Consensus 148 s~~iIHRDLKAGNiL~TldGdirLADFG 175 (1187)
T KOG0579|consen 148 SQNIIHRDLKAGNILLTLDGDIRLADFG 175 (1187)
T ss_pred hcchhhhhccccceEEEecCcEeeeccc
Confidence 4579999999999999988876676653
No 485
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=71.63 E-value=39 Score=34.63 Aligned_cols=72 Identities=15% Similarity=0.017 Sum_probs=43.7
Q ss_pred eCCccccceEEEEeCCc--cEEEEecCC-CC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393 57 VGGGCINLASRYGTDAG--SFFVKTNRS-IG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 131 (326)
Q Consensus 57 l~~G~~n~~y~v~~~~~--~~vlK~~~~-~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 131 (326)
+|-|+...||--..-+. +..+|--+. ++ ..-+..|..+.+.|+.. .+.+-++. .+++|..-+.||.++|++
T Consensus 583 LGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHk---NIVrYLGs-~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 583 LGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHK---NIVRYLGS-VSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred eecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhH---hHHHHhhc-cCCCCeEEEEeecCCCCc
Confidence 45667777776554322 566666553 22 23366788888888764 13333333 222567778899999986
Q ss_pred C
Q 020393 132 S 132 (326)
Q Consensus 132 ~ 132 (326)
+
T Consensus 659 L 659 (1226)
T KOG4279|consen 659 L 659 (1226)
T ss_pred H
Confidence 5
No 486
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=71.14 E-value=14 Score=35.58 Aligned_cols=57 Identities=21% Similarity=0.143 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-c---ccCchhhhhhhh
Q 020393 202 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C---YYGHNEAEFGMS 263 (326)
Q Consensus 202 ~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~---~~G~~~~Dla~~ 263 (326)
++..+.++++.+..+ ...++-|.|++|.|||+.+....-|=||. | .--+|.-|-...
T Consensus 112 irnim~QilqGL~hi-----Hk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVST 172 (538)
T KOG0661|consen 112 IRNIMYQILQGLAHI-----HKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVST 172 (538)
T ss_pred HHHHHHHHHHHHHHH-----HhcCcccccCChhheEecccceeEecccccccccccCCCcchhhhc
Confidence 444555555555432 35699999999999999865556788864 3 356666665544
No 487
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=70.97 E-value=2.4 Score=35.45 Aligned_cols=36 Identities=28% Similarity=0.338 Sum_probs=29.1
Q ss_pred CCcceeecCCCCCCeeecCCCCeEEEccc-c-ccCchh
Q 020393 222 VEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNE 257 (326)
Q Consensus 222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~-~~G~~~ 257 (326)
...-++|.|++|.|+|+..+|..-+-|+. + .+|-|.
T Consensus 118 hshnvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 118 HSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 34568899999999999999988899974 3 577765
No 488
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=69.75 E-value=3.7 Score=34.96 Aligned_cols=24 Identities=33% Similarity=0.364 Sum_probs=19.9
Q ss_pred ecCCCCCCeeecCCCCeEEEcccc
Q 020393 228 HGDLWSGNISSDKNGEPVILDPAC 251 (326)
Q Consensus 228 HgDl~~~NiL~~~~~~~~iID~~~ 251 (326)
=||-|++||+++++|...-||+..
T Consensus 105 lgDRh~~NIli~~~G~v~hIDfg~ 128 (202)
T smart00146 105 LGDRHNDNIMLDKTGHLFHIDFGF 128 (202)
T ss_pred CCCCCCCcEEEeCCCCEEEEechh
Confidence 369999999999878777899743
No 489
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=67.79 E-value=3.8 Score=35.86 Aligned_cols=32 Identities=28% Similarity=0.223 Sum_probs=23.8
Q ss_pred CcceeecCCCCCCeeec-CCCCeEEEccccccC
Q 020393 223 EPCLLHGDLWSGNISSD-KNGEPVILDPACYYG 254 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~-~~~~~~iID~~~~~G 254 (326)
...|-=||=|++|||++ .+|...-||+...+|
T Consensus 135 ~YilglgDRH~~NIli~~~tG~v~HIDfg~~f~ 167 (235)
T cd05172 135 HWILGIGDRHLSNFLVDLETGGLVGIDFGHAFG 167 (235)
T ss_pred hheeeccCCCcccEEEECCCCcEEEEeeHhhhc
Confidence 34555689999999998 467788899854433
No 490
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=64.47 E-value=3.8 Score=31.72 Aligned_cols=47 Identities=19% Similarity=0.128 Sum_probs=36.5
Q ss_pred EeEeCCccccceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHh
Q 020393 54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYE 100 (326)
Q Consensus 54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~ 100 (326)
-+|++.|...+||+-++.+| ++++|+.++.-...+.....+++.+..
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~ 63 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLAR 63 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHH
Confidence 36788889999999988665 899999887555666777777777654
No 491
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=62.43 E-value=5.4 Score=36.46 Aligned_cols=31 Identities=29% Similarity=0.309 Sum_probs=24.0
Q ss_pred CcceeecCCCCCCeeec-CCCCeEEEcccccc
Q 020393 223 EPCLLHGDLWSGNISSD-KNGEPVILDPACYY 253 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~-~~~~~~iID~~~~~ 253 (326)
...|-=||-|++|||++ .+|...-||+.+.+
T Consensus 208 ~yilglgDRh~~NIli~~~tG~v~hiDf~~~f 239 (307)
T cd05170 208 GYVIGLGDRHLDNVLIDLKTGEVVHIDYNVCF 239 (307)
T ss_pred HHHccCCCCCCccEEEEcCCCcEEEEeeHhhh
Confidence 44666799999999999 46777889986443
No 492
>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms c
Probab=62.03 E-value=5 Score=37.39 Aligned_cols=30 Identities=30% Similarity=0.356 Sum_probs=23.8
Q ss_pred ceeecCCCCCCeeecCCCCeEEEccccccC
Q 020393 225 CLLHGDLWSGNISSDKNGEPVILDPACYYG 254 (326)
Q Consensus 225 ~LiHgDl~~~NiL~~~~~~~~iID~~~~~G 254 (326)
.|==||=|.+|||++.+|...-||+...+|
T Consensus 204 iLgigDRH~~NILi~~~G~~~HIDFG~ilg 233 (352)
T cd00891 204 VLGIGDRHNDNIMLTKTGHLFHIDFGHFLG 233 (352)
T ss_pred HccccccCCCceEECCCCCEEEEehHHhhc
Confidence 344479999999999888888899854554
No 493
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=61.88 E-value=24 Score=34.25 Aligned_cols=93 Identities=19% Similarity=0.140 Sum_probs=63.3
Q ss_pred eEeCCccccceEEEEe--CCc----cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393 55 CPVGGGCINLASRYGT--DAG----SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 122 (326)
Q Consensus 55 ~~l~~G~~n~~y~v~~--~~~----~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 122 (326)
..+|+|.+..||+=+. .++ .+.+|..... ....+-.|+++++.|.. ..|-++|+.... ....++
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H---~NVVr~yGVa~~-~~Pl~i 238 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH---PNVVRFYGVAVL-EEPLML 238 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEcC-CCccEE
Confidence 6689999999998554 222 2455555431 12345689988888653 357777775443 567899
Q ss_pred EEeeecCCCCC----------------CcHHHHHHHHHHHhhcCC
Q 020393 123 IMEFIEFGSSR----------------GNQSVFGKKLAEMHKAGK 151 (326)
Q Consensus 123 v~e~l~G~~~~----------------~~~~~lg~~La~lH~~~~ 151 (326)
|||.+.|+.+. ..+.+++.-|+-||+...
T Consensus 239 vmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~ 283 (474)
T KOG0194|consen 239 VMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNC 283 (474)
T ss_pred EEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCC
Confidence 99999998752 235678888888988765
No 494
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII
Probab=61.81 E-value=5.6 Score=36.08 Aligned_cols=28 Identities=29% Similarity=0.340 Sum_probs=22.1
Q ss_pred eeecCCCCCCeeecCCCCeEEEcccccc
Q 020393 226 LLHGDLWSGNISSDKNGEPVILDPACYY 253 (326)
Q Consensus 226 LiHgDl~~~NiL~~~~~~~~iID~~~~~ 253 (326)
|==||=|.+|||++.+|...=||+...+
T Consensus 143 LGigDRH~~NILi~~~G~liHIDFG~~f 170 (293)
T cd05168 143 LQIKDRHNGNILIDNDGHIIHIDFGFML 170 (293)
T ss_pred hhccccCCCceEEcCCCCEEEEehHHhh
Confidence 3347999999999998888889975333
No 495
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=61.33 E-value=5.8 Score=34.25 Aligned_cols=26 Identities=31% Similarity=0.267 Sum_probs=20.8
Q ss_pred eeecCCCCCCeeecC-CCCeEEEcccc
Q 020393 226 LLHGDLWSGNISSDK-NGEPVILDPAC 251 (326)
Q Consensus 226 LiHgDl~~~NiL~~~-~~~~~iID~~~ 251 (326)
+-=||=|++|||++. +|...-||+..
T Consensus 130 lglgDRh~~NIli~~~~G~~~hIDfg~ 156 (219)
T cd00142 130 LGIGDRHPDNIMIDLDTGKLFHIDFGF 156 (219)
T ss_pred hccCCCCCccEEEECCCCeEEEEeeHH
Confidence 334699999999998 77778899753
No 496
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=61.08 E-value=6 Score=34.68 Aligned_cols=29 Identities=34% Similarity=0.465 Sum_probs=21.9
Q ss_pred ceeecCCCCCCeeecC-CCCeEEEcccccc
Q 020393 225 CLLHGDLWSGNISSDK-NGEPVILDPACYY 253 (326)
Q Consensus 225 ~LiHgDl~~~NiL~~~-~~~~~iID~~~~~ 253 (326)
.|==||=|++|||++. +|...-||+...+
T Consensus 140 ilgigDRh~~NIli~~~tG~~~HIDfg~~~ 169 (237)
T cd00892 140 ILGLGDRHGENILFDSNTGDVVHVDFNCLF 169 (237)
T ss_pred HhccCCCCcccEEEEcCCCcEEEEehHhhh
Confidence 3334799999999997 6777889975433
No 497
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=61.03 E-value=4.9 Score=36.13 Aligned_cols=29 Identities=28% Similarity=0.257 Sum_probs=23.6
Q ss_pred CcceeecCCCCCCeeecC-CCCeEEEcccc
Q 020393 223 EPCLLHGDLWSGNISSDK-NGEPVILDPAC 251 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~-~~~~~iID~~~ 251 (326)
...|-=||=|++|||++. +|...-||+..
T Consensus 180 ~YilglgDRH~~NIll~~~tG~v~HIDfg~ 209 (280)
T cd05169 180 GYILGLGDRHPSNIMIDRLTGKVIHIDFGD 209 (280)
T ss_pred HhheeccCCCcceEEEEcCCCCEEEEecHH
Confidence 456667899999999997 67788899853
No 498
>cd04792 LanM-like LanM-like proteins. LanM is a bifunctional enzyme, involved in the synthesis of class II lantibiotics. It is responsible for both the dehydration and the cyclization of the precursor-peptide during lantibiotic synthesis. The C-terminal domain shows similarity to LanC, the cyclase component of the lan operon, but the N terminus seems to be unrelated to the dehydratase, LanB.
Probab=60.64 E-value=93 Score=32.58 Aligned_cols=79 Identities=18% Similarity=0.105 Sum_probs=44.0
Q ss_pred ceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCC---CCCcceeeecccCCCceEEEEeeecCCCCC------
Q 020393 64 LASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRT---IRAPRPFKVGALPTGGSYIIMEFIEFGSSR------ 133 (326)
Q Consensus 64 ~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~---~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~------ 133 (326)
.|-+++.++| ++|=|--+-.... .=.++++++.+..+ ..+|+++..+ .|--+||++..+..
T Consensus 104 ~V~~l~f~~g~kivYKPr~l~~d~---~f~~~l~~ln~~~~~~~~~~~~~l~~~------~ygw~EfI~~~~c~~~~e~~ 174 (825)
T cd04792 104 VVAILTFSSGLKLVYKPRSLSVDA---LFQELLEWLNSFLGALPLRTPKVLDRG------DYGWEEFIEHQPCQSKEEVE 174 (825)
T ss_pred eEEEEEECCCCEEEECCCCchHHH---HHHHHHHHHHhcCCccccccceeeecC------CcceEEeecCCCCCCHHHHH
Confidence 3566666544 5666654322112 22556777765432 2577777443 36667888876542
Q ss_pred CcHHHHHHHHHHHhhcCC
Q 020393 134 GNQSVFGKKLAEMHKAGK 151 (326)
Q Consensus 134 ~~~~~lg~~La~lH~~~~ 151 (326)
..-..+|..||-+|....
T Consensus 175 ~fY~r~G~llal~y~L~~ 192 (825)
T cd04792 175 RYYYRLGGLLALLYLLNA 192 (825)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 223566666666666555
No 499
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=60.37 E-value=6.3 Score=35.48 Aligned_cols=31 Identities=29% Similarity=0.258 Sum_probs=24.0
Q ss_pred CcceeecCCCCCCeeecC-CCCeEEEcccccc
Q 020393 223 EPCLLHGDLWSGNISSDK-NGEPVILDPACYY 253 (326)
Q Consensus 223 ~~~LiHgDl~~~NiL~~~-~~~~~iID~~~~~ 253 (326)
...|-=||-||+|||++. +|...-||+.+.+
T Consensus 180 ~yilglgDRh~~NIll~~~tG~v~hiDf~~~f 211 (279)
T cd05171 180 GYILGLGDRHANNILIDEKTAEVVHIDLGIAF 211 (279)
T ss_pred HHhhccCCCCcccEEEEcCcCcEEEEechhhh
Confidence 445666899999999984 5778889985443
No 500
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=60.24 E-value=6.2 Score=34.22 Aligned_cols=27 Identities=41% Similarity=0.495 Sum_probs=21.0
Q ss_pred ceeecCCCCCCeeecC-CCCeEEEcccc
Q 020393 225 CLLHGDLWSGNISSDK-NGEPVILDPAC 251 (326)
Q Consensus 225 ~LiHgDl~~~NiL~~~-~~~~~iID~~~ 251 (326)
.+-=||-|++|||++. +|...-||+..
T Consensus 132 vlglgDRh~~NIli~~~tG~v~hIDf~~ 159 (222)
T cd05164 132 ILGLGDRHLDNILIDRETGEVVHIDFGC 159 (222)
T ss_pred HhccCCCCCceEEEECCCCcEEEEccHH
Confidence 3444799999999998 67777799753
Done!