Query 020397
Match_columns 326
No_of_seqs 308 out of 2444
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:15:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020397.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020397hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jxp_A Coenzyme PQQ synthesis 100.0 5.1E-50 1.8E-54 361.7 19.5 264 20-324 1-305 (321)
2 3md7_A Beta-lactamase-like; ss 100.0 1E-46 3.6E-51 337.3 28.8 269 12-326 18-293 (293)
3 3g1p_A Protein PHNP; C-P lyase 100.0 1.3E-47 4.4E-52 337.1 16.0 245 20-324 1-251 (258)
4 2cbn_A Ribonuclease Z; phospho 100.0 1.6E-40 5.6E-45 298.8 23.3 250 21-324 1-306 (306)
5 3zwf_A Zinc phosphodiesterase 100.0 7.2E-41 2.4E-45 307.8 21.2 253 22-326 1-359 (368)
6 1y44_A Ribonuclease Z; zinc-de 100.0 3.8E-39 1.3E-43 291.8 21.6 249 22-325 1-305 (320)
7 1zkp_A Hypothetical protein BA 100.0 1.3E-36 4.5E-41 268.3 26.1 246 12-323 15-267 (268)
8 2e7y_A TRNAse Z; tRNA maturati 100.0 4.4E-31 1.5E-35 234.1 19.8 221 69-324 12-280 (280)
9 3rpc_A Possible metal-dependen 100.0 3.2E-27 1.1E-31 207.7 18.4 214 71-324 14-264 (264)
10 2az4_A Hypothetical protein EF 99.9 4.3E-26 1.5E-30 214.2 22.8 197 69-292 20-263 (429)
11 3kl7_A Putative metal-dependen 99.9 2E-26 6.8E-31 199.0 18.1 164 71-291 39-212 (235)
12 2wyl_A L-ascorbate-6-phosphate 99.9 1.1E-25 3.7E-30 206.6 24.0 223 71-325 47-324 (360)
13 3bv6_A Metal-dependent hydrola 99.9 1.6E-25 5.4E-30 206.7 22.2 223 71-325 71-349 (379)
14 3bk2_A RNAse J, metal dependen 99.9 4.1E-24 1.4E-28 206.5 18.2 213 69-315 30-270 (562)
15 3iek_A Ribonuclease TTHA0252; 99.9 7.4E-24 2.5E-28 198.6 16.3 171 69-261 14-192 (431)
16 3zq4_A Ribonuclease J 1, RNAse 99.9 1.5E-22 5.3E-27 194.7 21.9 215 69-319 22-256 (555)
17 1vjn_A Zn-dependent hydrolase 99.9 4.7E-22 1.6E-26 169.8 17.9 155 66-293 17-178 (220)
18 3af5_A Putative uncharacterize 99.9 2.3E-22 8E-27 197.3 17.4 250 19-322 186-463 (651)
19 2i7t_A Cleavage and polyadenyl 99.9 4.8E-22 1.6E-26 188.1 17.0 180 69-271 25-217 (459)
20 2ycb_A Beta-CAsp RNAse, cleava 99.9 4E-22 1.4E-26 195.2 16.7 232 69-322 193-449 (636)
21 2i7x_A Protein CFT2; polyadeny 99.9 1.5E-21 5.2E-26 192.5 15.9 181 68-261 14-219 (717)
22 2xr1_A Cleavage and polyadenyl 99.9 2.6E-21 9E-26 189.4 16.9 233 69-322 197-452 (640)
23 2p4z_A Metal-dependent hydrola 99.9 2.7E-22 9.4E-27 178.0 7.3 216 68-324 32-284 (284)
24 4b87_A DNA cross-LINK repair 1 99.8 5.4E-20 1.9E-24 168.2 17.3 187 82-318 35-230 (367)
25 3zdk_A 5' exonuclease apollo; 99.8 1.2E-17 4E-22 150.8 15.7 182 83-314 9-203 (336)
26 2bib_A CBPE, teichoic acid pho 99.7 1.4E-16 4.8E-21 153.8 19.3 188 69-288 18-253 (547)
27 3dha_A N-acyl homoserine lacto 99.7 5.1E-17 1.8E-21 141.5 14.2 164 20-233 6-199 (254)
28 3aj3_A MLR6805 protein, 4-pyri 99.7 5E-17 1.7E-21 143.2 11.2 172 21-233 3-211 (274)
29 2r2d_A AGR_PTI_140P, Zn-depend 99.7 2.2E-17 7.7E-22 145.5 8.5 180 22-233 3-217 (276)
30 3adr_A Putative uncharacterize 99.7 6.5E-17 2.2E-21 141.3 11.4 182 66-293 17-212 (261)
31 1ztc_A Hypothetical protein TM 99.7 3.8E-17 1.3E-21 139.5 8.5 160 21-233 12-178 (221)
32 3m8t_A 'BLR6230 protein; subcl 99.7 3.6E-16 1.2E-20 138.9 12.9 142 68-231 54-204 (294)
33 1k07_A FEZ-1 beta-lactamase; m 99.7 1E-15 3.4E-20 134.0 13.4 142 69-232 25-177 (263)
34 2xf4_A Hydroxyacylglutathione 99.6 7.2E-16 2.4E-20 130.3 10.8 141 69-232 13-154 (210)
35 1e5d_A Rubredoxin\:oxygen oxid 99.6 1E-14 3.4E-19 135.4 19.1 130 68-231 34-167 (402)
36 2ohh_A Type A flavoprotein FPR 99.6 7.4E-15 2.5E-19 136.4 18.1 131 69-231 35-172 (404)
37 1ycg_A Nitric oxide reductase; 99.6 2.1E-14 7.3E-19 133.0 20.5 129 69-231 36-168 (398)
38 2gcu_A Putative hydroxyacylglu 99.6 2.1E-15 7E-20 130.7 12.3 124 69-233 15-146 (245)
39 3l6n_A Metallo-beta-lactamase; 99.6 3.8E-15 1.3E-19 126.6 12.5 127 69-232 31-161 (219)
40 1sml_A Protein (penicillinase) 99.6 8.9E-15 3E-19 128.4 15.1 143 68-232 37-187 (269)
41 1p9e_A Methyl parathion hydrol 99.6 6.1E-16 2.1E-20 140.0 7.3 181 20-233 53-259 (331)
42 2zwr_A Metallo-beta-lactamase 99.6 6.9E-15 2.4E-19 124.0 12.7 135 69-232 13-147 (207)
43 4efz_A Metallo-beta-lactamase 99.6 6.6E-15 2.3E-19 131.3 12.5 139 69-232 17-177 (298)
44 4ax1_B Metallo-beta-lactamase 99.6 2.5E-14 8.5E-19 127.5 14.0 189 68-293 57-255 (303)
45 3hnn_A Putative diflavin flavo 99.6 1.7E-14 5.7E-19 126.3 12.3 128 69-230 43-175 (262)
46 2qed_A Hydroxyacylglutathione 99.6 3.5E-14 1.2E-18 123.9 12.9 118 69-232 19-137 (258)
47 3tp9_A Beta-lactamase and rhod 99.6 4.5E-15 1.5E-19 140.8 7.8 127 69-231 16-151 (474)
48 2q9u_A A-type flavoprotein; fl 99.5 4.2E-13 1.4E-17 125.0 20.4 129 69-231 41-173 (414)
49 1qh5_A Glyoxalase II, protein 99.5 4.1E-14 1.4E-18 123.5 12.3 120 69-231 12-136 (260)
50 2vw8_A PA1000, PQSE; quinolone 99.5 3.5E-14 1.2E-18 126.8 11.6 142 69-232 24-183 (303)
51 1m2x_A Class B carbapenemase B 99.5 5.6E-14 1.9E-18 119.8 12.2 126 69-232 27-157 (223)
52 1a7t_A Metallo-beta-lactamase; 99.5 4.5E-14 1.5E-18 121.2 11.3 168 69-292 37-210 (232)
53 4hl2_A Beta-lactamase NDM-1; s 99.5 1.7E-14 5.9E-19 124.6 8.1 135 68-232 47-184 (243)
54 2zo4_A Metallo-beta-lactamase 99.5 6.5E-14 2.2E-18 125.8 11.9 146 67-232 20-193 (317)
55 3esh_A Protein similar to meta 99.5 2.1E-14 7.1E-19 126.8 8.3 144 69-233 48-210 (280)
56 1mqo_A Beta-lactamase II; alph 99.5 5.8E-14 2E-18 120.0 10.4 127 69-232 41-171 (227)
57 4ad9_A Lactb2, beta-lactamase- 99.5 2.5E-13 8.5E-18 120.4 12.8 134 66-231 29-167 (289)
58 1xm8_A Glyoxalase II; structur 99.5 1E-13 3.5E-18 120.6 9.9 122 69-232 12-134 (254)
59 4dik_A Flavoprotein; TM0755, e 99.5 3.9E-13 1.3E-17 124.5 14.2 126 70-231 53-182 (410)
60 2p18_A Glyoxalase II; metallop 99.5 3.8E-13 1.3E-17 120.4 13.0 130 69-232 40-183 (311)
61 3q6v_A Beta-lactamase; metallo 99.5 9.1E-13 3.1E-17 112.8 14.4 178 69-291 26-214 (233)
62 3r2u_A Metallo-beta-lactamase 99.5 8.1E-14 2.8E-18 131.7 7.6 129 69-232 37-172 (466)
63 1jjt_A IMP-1 metallo beta-lact 99.4 4.5E-13 1.5E-17 114.6 11.5 126 68-232 32-161 (228)
64 3iog_A Beta-lactamase; hydrola 99.4 3.5E-13 1.2E-17 115.0 9.4 140 69-232 23-168 (227)
65 2y8b_A Metallo-B-lactamase; hy 99.4 8.4E-13 2.9E-17 115.6 11.8 131 68-233 67-201 (265)
66 2fhx_A SPM-1; metallo-beta-lac 99.4 1E-12 3.4E-17 113.6 11.8 181 69-291 30-224 (246)
67 3h3e_A Uncharacterized protein 99.4 7.2E-12 2.5E-16 109.0 16.1 209 69-325 32-266 (267)
68 4eyb_A Beta-lactamase NDM-1; m 99.3 3E-12 1E-16 112.4 8.5 135 69-232 75-211 (270)
69 2p97_A Hypothetical protein; p 99.2 1.6E-11 5.5E-16 102.8 6.1 119 68-233 23-141 (201)
70 2cfu_A SDSA1; SDS-hydrolase, l 99.2 1.4E-10 4.8E-15 113.7 11.9 150 69-232 123-302 (658)
71 2yhe_A SEC-alkyl sulfatase; hy 98.4 1.7E-10 5.9E-15 112.7 0.0 150 69-232 133-313 (668)
72 3bk2_A RNAse J, metal dependen 76.8 3.5 0.00012 39.2 5.9 94 222-325 340-440 (562)
73 3zq4_A Ribonuclease J 1, RNAse 71.4 4.1 0.00014 38.7 4.9 94 221-324 324-424 (555)
74 2ycb_A Beta-CAsp RNAse, cleava 67.5 5.9 0.0002 38.3 5.1 57 263-324 576-635 (636)
75 2xr1_A Cleavage and polyadenyl 66.7 7.1 0.00024 37.8 5.5 57 263-324 580-639 (640)
76 3af5_A Putative uncharacterize 65.8 7.3 0.00025 37.8 5.4 57 263-324 591-650 (651)
77 2az4_A Hypothetical protein EF 64.9 5.3 0.00018 36.3 4.1 51 263-324 379-429 (429)
78 2i7t_A Cleavage and polyadenyl 62.1 8.4 0.00029 35.4 4.9 63 263-326 393-458 (459)
79 4b87_A DNA cross-LINK repair 1 33.7 27 0.00093 31.0 3.3 27 264-290 319-345 (367)
80 3iek_A Ribonuclease TTHA0252; 26.8 77 0.0026 28.7 5.2 55 263-324 377-431 (431)
81 1qyd_A Pinoresinol-lariciresin 25.9 2.3E+02 0.008 23.4 7.9 57 225-288 59-116 (313)
82 3zdk_A 5' exonuclease apollo; 25.6 36 0.0012 29.9 2.5 29 263-291 274-302 (336)
83 1ilo_A Conserved hypothetical 24.5 35 0.0012 21.6 1.8 10 21-30 1-10 (77)
84 2ppv_A Uncharacterized protein 20.6 1.8E+02 0.0062 25.3 6.0 63 222-289 156-218 (332)
No 1
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=100.00 E-value=5.1e-50 Score=361.74 Aligned_cols=264 Identities=21% Similarity=0.321 Sum_probs=209.5
Q ss_pred CceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCC-CCCcccccEEEEEeccCCCCcc-EEEEecCccHHHH
Q 020397 20 GRSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNL-NPNYRCNTSLLIDHCEGDGKHS-YILIDVGKTFREQ 97 (326)
Q Consensus 20 ~~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~-~~~~r~~ss~li~~~~~~~~~~-~iLiD~G~~~~~~ 97 (326)
|||||+|||||+|+|+|.++|. |.+|.+||+.+ ++ + .|+++|++|+. ++. .+|||||++++.+
T Consensus 1 ~~M~~~~LGtg~s~G~P~~~C~-------C~~C~~a~~~~-~~~~--~R~~ss~li~~-----~~~~~iLiD~G~~~~~~ 65 (321)
T 3jxp_A 1 MMMYIQVLGSAAGGGFPQWNCN-------CVNCKGYRDGT-LKAT--ARTQSSIALSD-----DGVHWILCNASPDIRAQ 65 (321)
T ss_dssp -CEEEEEEECBCTTTBTTTTCC-------SHHHHHHHHTC-SCCC--CBCBCEEEEES-----SSSSEEEECCCTTHHHH
T ss_pred CeEEEEEEEeCCCCCCCcCCcC-------CccchhhhhCC-CCCC--cccceEEEEEe-----CCceEEEEeCCchHHHH
Confidence 6899999999999999999999 99999998753 23 4 89999999996 555 4999999999888
Q ss_pred HHHhhh-----cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCcccccccccCc
Q 020397 98 ILRWFT-----FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQ 172 (326)
Q Consensus 98 l~~~~~-----~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~ 172 (326)
+.+... +.++.+|++|||||.|.||++|++.|+. ..+++||+++.+.+.++..+. .+.. ...
T Consensus 66 l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~---------~~~~~vy~~~~~~~~l~~~~~-~f~~-~~~-- 132 (321)
T 3jxp_A 66 LQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLRE---------GCPHQVWCTDMVHQDLTTGFP-LFNM-LSH-- 132 (321)
T ss_dssp HHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGG---------GCCEEEEECHHHHHHTTTTSC-HHHH-HTT--
T ss_pred HHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHh---------cCCCeEEECHHHHHHHHhhCc-cccc-ccc--
Confidence 876421 1367899999999999999999999964 248999999999887765442 2210 000
Q ss_pred cccccccceeeEeccCCCCceEE---CCEEEEEEEee--------eCCC---ceeEEEEEc--Cc-eeEEEeCCCCCCCh
Q 020397 173 EVRRVAQLDWKIIEEDCDKPFVA---SGLKFVPLPVM--------HGED---YVCLGFLFG--EK-CRVAYISDVSRIPP 235 (326)
Q Consensus 173 ~~~~~~~~~~~~i~~~~~~~~~~---~~~~v~~~~~~--------H~~~---~~~~g~~i~--~~-~~i~ysgDt~~~~~ 235 (326)
..+.++++.+++ ++++.+ ++++|+++++. |+.. .+++||+|+ .+ ++++|+|||+++++
T Consensus 133 ---~~~~i~~~~i~~--g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~~~~~ 207 (321)
T 3jxp_A 133 ---WNGGLQWNRIEL--EGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDE 207 (321)
T ss_dssp ---TTTCEEEEECCS--SSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCCCCCH
T ss_pred ---ccCceeEEEcCC--CCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCCCCCH
Confidence 012256788888 899999 99999999998 5431 379999998 66 89999999998888
Q ss_pred hhHHHhhcCCCCCCcEEEEcCccCCC-------------CCCCCCCHH---HHHHHHHHcCCCeEEEEeeccccCchh-h
Q 020397 236 TTEYVISKSGAGQLDLLILDTLYKDG-------------CHNTHFCFP---QTLEAVKRLCPKQALLIGMTHEFDHHK-D 298 (326)
Q Consensus 236 ~~~~~l~~~~~~~~Dlli~e~~~~~~-------------~~~~H~~~~---~a~~~~~~~~~k~lvl~H~~~~~~~~~-~ 298 (326)
++++++++ +|+||+||++... ..++|++.+ +|+++++++++|++||||+++.++... .
T Consensus 208 ~~~~~~~~-----~D~li~eat~~~d~e~~~~glk~r~~~~~gH~s~~~~~eA~~~a~~~~~k~lvLtH~s~~np~l~~~ 282 (321)
T 3jxp_A 208 KLLAMMHG-----ADCLLVDGTLWEDDEMQRRGVGTRTGREMGHLAQNGPGGTLEVLDGFPRQRKVLIHINNTNPILDEN 282 (321)
T ss_dssp HHHHHHHH-----CSEEEEECCCSSTTHHHHHTSCSCCCC-CCCCCSSSTTCHHHHHTTCSSSEEEEESBCTTCGGGSTT
T ss_pred HHHHHhcC-----CCEEEEeCCCCCcHHHhhccccccccCCCcccCCCCHHHHHHHHHhCCCCeEEEEEeCCCCcccccc
Confidence 99999999 9999999987652 356899999 999999999999999999999875211 1
Q ss_pred hHHhHhhhhcCCCCeEEeecceEEee
Q 020397 299 NEFLAEWSKREGIPVQLSHDGLRIPI 324 (326)
Q Consensus 299 ~~~l~~~~~~~~~~v~~a~Dg~~i~l 324 (326)
.++..+. ...++++|+|||+|++
T Consensus 283 ~~e~~~~---~~~~v~~A~DGm~i~~ 305 (321)
T 3jxp_A 283 SPERAEV---LRRGVEVAFDGMSIEL 305 (321)
T ss_dssp CHHHHHH---HHTTEEECCTTCEEEE
T ss_pred hHHHHHh---hcCCcEEecCCcEEEe
Confidence 1122221 2348999999999986
No 2
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=100.00 E-value=1e-46 Score=337.28 Aligned_cols=269 Identities=28% Similarity=0.484 Sum_probs=215.3
Q ss_pred Cccccc-CCCceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCc--cEEEE
Q 020397 12 GNGAVS-EQGRSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKH--SYILI 88 (326)
Q Consensus 12 ~~~~~~-~~~~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~--~~iLi 88 (326)
++++.. ...+|+|+|||||++.|+|.++|. |.+|++++ +++ .|+++|++|+.. ++++ ..+||
T Consensus 18 ~~~~~~~~~~~m~v~~LG~g~~~G~P~~~c~-------c~~C~~~~----~~~--~R~~~s~li~~~--~~~g~~~~iLI 82 (293)
T 3md7_A 18 GPGSMTSPRNCLRFTLLGCGSSPGVPRINGD-------WGKCDPKN----PKN--RRRRASLLVERY--DAEGNNTVVVI 82 (293)
T ss_dssp ------CCCSEEEEEEEECBCTTCBSCTTCC-------CTTSCTTC----GGG--CBCBCEEEEEEE--CTTCCEEEEEE
T ss_pred CCcccccCCCcEEEEEEeecCCCCcccCCCC-------CccCCccC----CCC--cccccEEEEEec--CCCCceeEEEE
Confidence 444433 446799999999999999999999 99999984 344 899999999930 0133 79999
Q ss_pred ecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCccccccc
Q 020397 89 DVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKL 168 (326)
Q Consensus 89 D~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~ 168 (326)
|||++.+.++.+. ++.+|++|||||.|.||++|++.|+.... .+..+++||+++.+.+.++..+.+.+...
T Consensus 83 D~G~~~~~~l~~~----~~~~id~IliTH~H~DHi~Gl~~l~~~~~----~~~~~~~vy~~~~~~~~l~~~~~~~~~~~- 153 (293)
T 3md7_A 83 DTGPDFRMQMIDS----GVHMLDAAVYTHPHADHIHGIDDLRTYVV----DNGRLMDVYANRLTRNRLYDTFGYCFETP- 153 (293)
T ss_dssp CCCTTHHHHHHHH----TCCCCSEEECSCCCHHHHTTGGGGHHHHH----HHTSCEEEEECHHHHHHHHHHCGGGTSCC-
T ss_pred ECCccHHHHHHhc----CCCcccEEEEcCCCchhhCCHHHHHHHhh----cCCCceEEEECHHHHHHHHHhhhhhhccc-
Confidence 9999999888774 56899999999999999999998875320 11458999999999999888776654321
Q ss_pred ccCccccccccceeeEeccCCCCceEECC----EEEEEEEeeeCCCceeEEEEEcCceeEEEeCCCCCCChhhHHHhhcC
Q 020397 169 KEGQEVRRVAQLDWKIIEEDCDKPFVASG----LKFVPLPVMHGEDYVCLGFLFGEKCRVAYISDVSRIPPTTEYVISKS 244 (326)
Q Consensus 169 ~~g~~~~~~~~~~~~~i~~~~~~~~~~~~----~~v~~~~~~H~~~~~~~g~~i~~~~~i~ysgDt~~~~~~~~~~l~~~ 244 (326)
.+. ...+.++++.+++ ++.+.+++ ++|++++++|.. .+++||+|+ +++|+||+.++++++.+++++
T Consensus 154 -~~~--~~~~~~~~~~l~~--g~~~~~g~~~~~~~v~~~~~~H~~-~~~~g~~i~---~~~y~gDt~~~~~~~~~~~~~- 223 (293)
T 3md7_A 154 -VGS--SYPPILSMHDIAP--ETPFSIEGAGGAIRFEPFSQVHGD-IESLGFRIG---SVVYCTDVSAFPEQSLQYIKD- 223 (293)
T ss_dssp -TTC--CCCCCEEEEECCT--TCCEEECCTTCCEEEEEEEEEETT-EEEEEEEET---TEEEECSCSBCCGGGHHHHTT-
T ss_pred -ccc--CCCCceEEEEcCC--CCcEEECCCCCcEEEEEEEecCCC-CCEEEEEEe---EEEEECCCCCCCHHHHHHhcC-
Confidence 110 1112356788888 89999999 999999999984 389999998 899999999878899999999
Q ss_pred CCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhhcCCCCeEEeecceEEee
Q 020397 245 GAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSKREGIPVQLSHDGLRIPI 324 (326)
Q Consensus 245 ~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~~~~~~v~~a~Dg~~i~l 324 (326)
+|+||+|+++.. ..++|+++++++++++++++|++|++|+++.++..+ + ++....++.+|+|||+|+|
T Consensus 224 ----~Dlli~e~~~~~-~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~----~---~~~~~~~v~~a~DG~~i~l 291 (293)
T 3md7_A 224 ----ADVLIIGALQYR-PHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDYET----V---MRETPHHVEPGYDGLRFEV 291 (293)
T ss_dssp ----CSEEEEECCCSS-CBTTBCCHHHHHHHHHHHCCSEEEEESBCTTCCHHH----H---HHHSCTTEEECCTTCEEEE
T ss_pred ----CCEEEEeCccCC-CCCCCCCHHHHHHHHHHcCCCEEEEECCCCCCCHHH----H---HhhcCCCcEEeeCCcEEEe
Confidence 999999998765 678999999999999999999999999999875422 2 2334568999999999998
Q ss_pred cC
Q 020397 325 DL 326 (326)
Q Consensus 325 ~~ 326 (326)
+.
T Consensus 292 ~~ 293 (293)
T 3md7_A 292 AV 293 (293)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 3
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=100.00 E-value=1.3e-47 Score=337.12 Aligned_cols=245 Identities=24% Similarity=0.373 Sum_probs=197.2
Q ss_pred CceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecCccHHHHHH
Q 020397 20 GRSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQIL 99 (326)
Q Consensus 20 ~~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~ 99 (326)
|+|||+|||||+|.|+|.++|. |.+|.+||++| ++ .|+++|++|+. ++..+|||||.+...
T Consensus 1 m~~~~~~LGtg~~~g~P~~~c~-------C~~C~~ar~~~--~~--~r~~s~~li~~-----~~~~iLiD~G~~~~~--- 61 (258)
T 3g1p_A 1 MSLTLTLTGTGGAQGVPAWGCE-------CAACARARRSP--QY--RRQPCSGVVKF-----NDAITLIDAGLHDLA--- 61 (258)
T ss_dssp -CEEEEEEECBCSSCBSCTTCC-------SHHHHHHHHCG--GG--CBCBSEEEEEE-----TTEEEEECCCCTTHH---
T ss_pred CceEEEEEEeCCCCCCccCCcC-------ChhhhhhhhCc--cc--cccCceEEEEE-----CCcEEEEECCchHHH---
Confidence 6799999999999999999999 99999999886 33 78999999997 889999999954322
Q ss_pred HhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCcccccccccCcccccccc
Q 020397 100 RWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQ 179 (326)
Q Consensus 100 ~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 179 (326)
+ .....+|++|||||.|.||++|++.+... ...+++||+++.+.. +...+.. ++ .
T Consensus 62 ~---~~~~~~id~IliTH~H~DHi~gl~~l~~~-------~~~~~~v~~~~~~~~-----~~~~~~~---~~-----~-- 116 (258)
T 3g1p_A 62 D---RWSPGSFQQFLLTHYHMDHVQGLFPLRWG-------VGDPIPVYGPPDEQG-----CDDLFKH---PG-----L-- 116 (258)
T ss_dssp H---HCCTTSSCEEECSCCCHHHHGGGTTTTTC-------SSSCEEEEECCCSSC-----STTTTTS---CT-----T--
T ss_pred h---hcCcccCCEEEEccCchhHhCCHHHHhcc-------CCCCeEEEeChhhhh-----HHHHhcC---CC-----c--
Confidence 2 24567999999999999999999877532 135799999987641 1111100 11 1
Q ss_pred cee-eEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCc-eeEEEeCCCCCCChhhHHHh--hcCCCCCCcEEEEc
Q 020397 180 LDW-KIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEK-CRVAYISDVSRIPPTTEYVI--SKSGAGQLDLLILD 255 (326)
Q Consensus 180 ~~~-~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~-~~i~ysgDt~~~~~~~~~~l--~~~~~~~~Dlli~e 255 (326)
.++ ..+++ ++.+.+++++|++++++|+. +++||+|+.+ ++++|+||+.+.++.+++.+ ++ +|+||+|
T Consensus 117 ~~~~~~~~~--g~~~~~g~~~v~~~~~~H~~--~~~g~~i~~~~~~i~~~GDt~~~~~~~~~~l~~~~-----~Dlli~e 187 (258)
T 3g1p_A 117 LDFSHTVEP--FVVFDLQGLQVTPLPLNHSK--LTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQ-----PQVMVMD 187 (258)
T ss_dssp EEEEEECCT--TCCEEETTEEEEEEECCSSS--CCEEEEEECSSCEEEEECSCSSCCHHHHHHHHHTC-----CSEEEEE
T ss_pred cccccccCC--CCeEEECCEEEEEEECCCCC--CceEEEEEeCCcEEEEECCCCCCCHHHHHHHHhCC-----CCEEEEe
Confidence 122 46777 89999999999999999987 7999999987 89999999999887777777 46 9999999
Q ss_pred CccCCC--CCCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhhcCCCCeEEeecceEEee
Q 020397 256 TLYKDG--CHNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSKREGIPVQLSHDGLRIPI 324 (326)
Q Consensus 256 ~~~~~~--~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~~~~~~v~~a~Dg~~i~l 324 (326)
+++.+. ...+|+++++++++++++++|+++++|+++.++.. .+ ++..+.++.+|+|||+|++
T Consensus 188 ~t~~~~~~~~~~H~~~~~a~~~~~~~~~k~lil~H~s~~~~~~----~~---~~~~~~~v~~a~Dg~~~~~ 251 (258)
T 3g1p_A 188 CSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDAW----LM---ENALPSGFEVGFDGMEIGV 251 (258)
T ss_dssp CCBSSCSSCCSSSCBHHHHHHHHHHHCCSCEEEESCCHHHHHH----HT---TCCCCTTEEECCTTEEEC-
T ss_pred CCCCCccccCCCCCCHHHHHHHHHHcCCCEEEEECccCccchh----hh---hhhCCCCeEEccCCCEEee
Confidence 999764 36789999999999999999999999999876421 11 2356678999999999986
No 4
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=100.00 E-value=1.6e-40 Score=298.82 Aligned_cols=250 Identities=18% Similarity=0.221 Sum_probs=194.0
Q ss_pred ceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecCccHHHHHHH
Q 020397 21 RSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILR 100 (326)
Q Consensus 21 ~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~ 100 (326)
||+|+||||| +++|. . .|+.+|++|+... +.++..+|||||.+...++.+
T Consensus 1 ~m~i~~LGtg--~~~p~------------------------~---~r~~~~~li~~~~-~~~~~~iliD~G~~~~~~l~~ 50 (306)
T 2cbn_A 1 AMNLIFLGTS--AGVPT------------------------R---TRNVTAILLNLQH-PTQSGLWLFDCGEGTQHQLLH 50 (306)
T ss_dssp CCEEEEEECB--SSSCC------------------------S---SCCBCEEEEECCC-SSCCCEEEECCCTTHHHHHHT
T ss_pred CeEEEEEEcC--CCCCC------------------------C---CCCCCEEEEEeec-CCCCcEEEEECCHHHHHHHHH
Confidence 5999999999 46764 1 5778999998410 004578999999998777766
Q ss_pred hhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCcccccccccCccccccccc
Q 020397 101 WFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQL 180 (326)
Q Consensus 101 ~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 180 (326)
. +..+.+|++|||||.|.||++|++.++....+ .++..+++||+|+.+.+.++..+.+.... .. . .+
T Consensus 51 ~--~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~--~~~~~~~~i~~~~~~~~~l~~~~~~~~~~---~~-----~-~~ 117 (306)
T 2cbn_A 51 T--AFNPGKLDKIFISHLHGDHLFGLPGLLCSRSM--SGIIQPLTIYGPQGIREFVETALRISGSW---TD-----Y-PL 117 (306)
T ss_dssp S--CCCTTTEEEEECSCCCHHHHTTHHHHHHHHHH--TTCCSCEEEEESTTHHHHHHHHHHHTTCC---CS-----S-CE
T ss_pred h--CCCHHHcCEEEEecCCchhhCChHHHHHHHHh--cCCCCCeEEEcCccHHHHHHHHHHhhccC---CC-----c-eE
Confidence 4 55678999999999999999999998763211 12246899999999887776543211000 00 0 14
Q ss_pred eeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcC----------------------------------------
Q 020397 181 DWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGE---------------------------------------- 220 (326)
Q Consensus 181 ~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~---------------------------------------- 220 (326)
+++.+++ ++.+.+++++|+++++.|+. +++||+++.
T Consensus 118 ~~~~~~~--g~~~~~~~~~v~~~~~~H~~--~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~~~ 193 (306)
T 2cbn_A 118 EIVEIGA--GEILDDGLRKVTAYPLEHPL--ECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQI 193 (306)
T ss_dssp EEEECCS--EEEEECSSEEEEEEECBSSS--CCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEEC
T ss_pred EEEEcCC--CcEeecCCEEEEEEEccCCC--CccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCcEE
Confidence 5677777 88899999999999999987 799999862
Q ss_pred ----------c-eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCC-----CCCCCCCHHHHHHHHHHcCCCeE
Q 020397 221 ----------K-CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDG-----CHNTHFCFPQTLEAVKRLCPKQA 284 (326)
Q Consensus 221 ----------~-~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~-----~~~~H~~~~~a~~~~~~~~~k~l 284 (326)
+ ++|+|+|||++. +.+.+++++ +|+||+||+|.+. ...+|+++++|++++++++++++
T Consensus 194 ~~~~~~~~~~~g~~i~~sgDt~~~-~~~~~~~~~-----~D~li~E~t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~l 267 (306)
T 2cbn_A 194 NGADYLAAPVPGKALAIFGDTGPC-DAALDLAKG-----VDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKL 267 (306)
T ss_dssp CGGGTBCCCCCCCEEEECCSCBSC-STHHHHHTT-----CSEEEEECCBCGGGHHHHHHTTCCBHHHHHHHHHHHTCSEE
T ss_pred cHHHhcCCCCCCCEEEEeCCCCCH-HHHHHHhcC-----CCEEEEECcCChhhHhHHhhcCCCCHHHHHHHHHHcCCcEE
Confidence 2 689999999986 467788888 9999999999764 35789999999999999999999
Q ss_pred EEEeeccccCchhhhHHhHhhhhcCCCCeEEeecceEEee
Q 020397 285 LLIGMTHEFDHHKDNEFLAEWSKREGIPVQLSHDGLRIPI 324 (326)
Q Consensus 285 vl~H~~~~~~~~~~~~~l~~~~~~~~~~v~~a~Dg~~i~l 324 (326)
|+|||+++++... .+++.+++++.+.++.+|+|||+++|
T Consensus 268 vl~H~s~~~~~~~-~~~~~~e~~~~~~~~~~a~Dg~~~~~ 306 (306)
T 2cbn_A 268 IITHVSSRYDDKG-CQHLLRECRSIFPATELANDFTVFNV 306 (306)
T ss_dssp EEECBCTTCCHHH-HHHHHHHHHTTCSCEEECCTTCEEEC
T ss_pred EEEeecCCCCCCc-hhHHHHHHHHhCCCcEEcccccEeeC
Confidence 9999999876432 24455666666668999999999975
No 5
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=307.81 Aligned_cols=253 Identities=18% Similarity=0.202 Sum_probs=179.7
Q ss_pred eEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecCccHHHHHHHh
Q 020397 22 SALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRW 101 (326)
Q Consensus 22 m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~ 101 (326)
|||+||||| +++|. . .|+.+|++|+. ++..+|||||++...++.+.
T Consensus 1 M~l~~LGtg--~~~p~------------------------~---~r~~ss~ll~~-----~~~~iLiD~G~g~~~~l~~~ 46 (368)
T 3zwf_A 1 MDVTFLGTG--AAYPS------------------------P---TRGASAVVLRC-----EGECWLFDCGEGTQTQLMKS 46 (368)
T ss_dssp CEEEEEECB--SSSCC------------------------S---SSCSSEEEEEE-----TTEEEEECCCTTHHHHHHHS
T ss_pred CEEEEECCC--CCCCC------------------------C---CCCccEEEEEE-----CCeEEEEeCChhHHHHHHHc
Confidence 899999999 45664 1 57789999997 78899999999998888775
Q ss_pred hhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCC--CCCCCccEEeCHHHHHHHHHhCCcccccccccCcccccccc
Q 020397 102 FTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSAT--NDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQ 179 (326)
Q Consensus 102 ~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~--~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 179 (326)
+.++.+|++|||||.|.||++|++.|+....+... .+..+++||+|+++.+.+...+........+ .
T Consensus 47 --~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~---------~ 115 (368)
T 3zwf_A 47 --QLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVF---------H 115 (368)
T ss_dssp --SSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHHHHTTCCCSS---------C
T ss_pred --CCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCc---------e
Confidence 56778999999999999999999998854221100 1135899999999988876532111000000 0
Q ss_pred ceeeEeccC-------------------------CCC------------ceEECCEEEEEEEeeeCCCceeEEEEEcC--
Q 020397 180 LDWKIIEED-------------------------CDK------------PFVASGLKFVPLPVMHGEDYVCLGFLFGE-- 220 (326)
Q Consensus 180 ~~~~~i~~~-------------------------~~~------------~~~~~~~~v~~~~~~H~~~~~~~g~~i~~-- 220 (326)
+.++++.+. .|+ .++.++++|+++++.|+. +|+||+|+.
T Consensus 116 ~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~V~a~~~~H~v--p~~gy~i~e~~ 193 (368)
T 3zwf_A 116 YVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLFHRI--PSFGFSVVEKK 193 (368)
T ss_dssp EEEEEECCCGGGSCC-------------------CCCEECCBTTTTBEEEEECSSEEEEEEEEESSS--CEEEEEEEECC
T ss_pred EEEEEeecCccccccccccccccccccccCcccccccccccccccCceeEEeCCCEEEEEEeccCCC--ceEEEEEEecC
Confidence 112222110 021 233478999999999998 999999964
Q ss_pred -------------------------------------------------ceeEEEeCCCCCC-ChhhHHHhhcCCCCCCc
Q 020397 221 -------------------------------------------------KCRVAYISDVSRI-PPTTEYVISKSGAGQLD 250 (326)
Q Consensus 221 -------------------------------------------------~~~i~ysgDt~~~-~~~~~~~l~~~~~~~~D 250 (326)
+++++|+|||++. .+.+.+++++ +|
T Consensus 194 ~~g~~~~ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~~~~~~~~~~-----~D 268 (368)
T 3zwf_A 194 RPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFE-----AD 268 (368)
T ss_dssp ------------------------------------------------CCCEEEEECSCSEECSSHHHHHTTT-----CS
T ss_pred CcCccCHHHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHHhccccccceEEEEEecCCcccchhHHHHhcC-----CC
Confidence 3579999999971 3577888888 99
Q ss_pred EEEEcCccCCC-----CCCCCCCHHHHHHHHHHcCCCeEEEEeeccccCc--------hhhhHHhHhhhhcCCC--CeEE
Q 020397 251 LLILDTLYKDG-----CHNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDH--------HKDNEFLAEWSKREGI--PVQL 315 (326)
Q Consensus 251 lli~e~~~~~~-----~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~--------~~~~~~l~~~~~~~~~--~v~~ 315 (326)
+||+|++|.+. ..++|+++++|+++|+++++|++++||+++++.. ....+++.++|++.+. ++.+
T Consensus 269 lli~Eat~~~~~~~~a~~~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~~~~~~~~~~~~~~~~~~~ea~~~f~~~~~~~ 348 (368)
T 3zwf_A 269 LLIHEATLDDAQMDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLDLQEVTL 348 (368)
T ss_dssp EEEEECCSCGGGHHHHHHTTCCCHHHHHHHHHHTTCSEEEEECBCCCC---------------------------CEEEE
T ss_pred EEEEecCCChHHHhhhhcCCCCCHHHHHHHHHHcCCCEEEEEeeCcccCccccccccccchHHHHHHHHHHhcCCCceEE
Confidence 99999999875 2478999999999999999999999999999862 1234567777887765 7999
Q ss_pred eecceEEeecC
Q 020397 316 SHDGLRIPIDL 326 (326)
Q Consensus 316 a~Dg~~i~l~~ 326 (326)
|+|||+++|++
T Consensus 349 a~dg~~~~i~~ 359 (368)
T 3zwf_A 349 AEDFMVISIPI 359 (368)
T ss_dssp CCTTCEEECCC
T ss_pred ecCCcEEEeec
Confidence 99999999864
No 6
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=100.00 E-value=3.8e-39 Score=291.77 Aligned_cols=249 Identities=20% Similarity=0.255 Sum_probs=191.5
Q ss_pred eEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecCccHHHHHHHh
Q 020397 22 SALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRW 101 (326)
Q Consensus 22 m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~ 101 (326)
|||+||||| +++|. . .|+.+|++|+.. ..++..+|||||.+...++.+.
T Consensus 1 M~i~~LGtg--~~~p~------------------------~---~r~~~~~li~~~--~~~~~~iLiD~G~~~~~~l~~~ 49 (320)
T 1y44_A 1 MELLFLGTG--AGIPA------------------------K---ARNVTSVALKLL--EERRSVWLFDCGEATQHQMLHT 49 (320)
T ss_dssp CEEEEEECB--SSSCC------------------------S---SCCBCEEEEEET--TTTSEEEEECCCTTHHHHHTTS
T ss_pred CEEEEEecC--CCCCC------------------------c---cCCCCEEEEEEe--cCCCcEEEEECCHHHHHHHHHc
Confidence 899999999 46764 1 577899999840 0145789999999987666553
Q ss_pred hhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCcccccccccCccccccccce
Q 020397 102 FTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLD 181 (326)
Q Consensus 102 ~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 181 (326)
+..+.+|++|||||.|.||++|++.++....+ .++..+++||+|+.+.+.++..+.+.... .. . ..+
T Consensus 50 --~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~~~~~~---~~-----~-~~~ 116 (320)
T 1y44_A 50 --TIKPRKIEKIFITHMHGDHVYGLPGLLGSRSF--QGGEDELTVYGPKGIKAFIETSLAVTKTH---LT-----Y-PLA 116 (320)
T ss_dssp --SCCGGGEEEEECSBCCGGGTTTHHHHHHHHHH--TTCCSCEEEEESTTHHHHHHHHHHHTTCC---CS-----S-CEE
T ss_pred --CCCHHHcCEEEEeCCChhhhCCHHHHHHHHHh--cCCCCCEEEEeCHHHHHHHHHHHHhhccC---CC-----C-ceE
Confidence 45677899999999999999999998763211 12246899999999887776543211000 00 0 135
Q ss_pred eeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcC-----------------------------------------
Q 020397 182 WKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGE----------------------------------------- 220 (326)
Q Consensus 182 ~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~----------------------------------------- 220 (326)
++.+++ ++.+.+++++|+++|+.|+. +++||+++.
T Consensus 117 ~~~~~~--g~~~~~~~~~v~~~p~~H~~--~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~ 192 (320)
T 1y44_A 117 IQEIEE--GIVFEDDQFIVTAVSVIHGV--EAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIIN 192 (320)
T ss_dssp EEECCS--EEEEECSSEEEEEEECBSSS--SBEEEEEEECCBCCCC----------------------------------
T ss_pred EEEcCC--CceEecCCEEEEEEEccCCC--CcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEc
Confidence 567777 88899999999999999998 799999862
Q ss_pred ---------c-eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCC-----CCCCCCCHHHHHHHHHHcCCCeEE
Q 020397 221 ---------K-CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDG-----CHNTHFCFPQTLEAVKRLCPKQAL 285 (326)
Q Consensus 221 ---------~-~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~-----~~~~H~~~~~a~~~~~~~~~k~lv 285 (326)
+ ++++|+|||++. +.+.+++++ +|+||+||+|.+. ...+|+++++|++++++++++++|
T Consensus 193 ~~~~~~~~~~g~~i~~sgDt~~~-~~~~~~~~~-----~D~li~E~t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~li 266 (320)
T 1y44_A 193 GNDFLEPPKKGRSVVFSGDTRVS-DKLKELARD-----CDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLI 266 (320)
T ss_dssp ----CCCCBCCCEEEECCSCBCC-HHHHHHTTT-----CSEEEEECCBCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEE
T ss_pred HHHhcccCCCCCEEEEeCCCCCH-HHHHHHhCC-----CCEEEEeccCCcchHhHHhhcCCCCHHHHHHHHHHcCCCEEE
Confidence 3 689999999986 567788888 9999999999865 257899999999999999999999
Q ss_pred EEeeccccCchhhhHHhHhhhhcCCCCeEEeecceEEeec
Q 020397 286 LIGMTHEFDHHKDNEFLAEWSKREGIPVQLSHDGLRIPID 325 (326)
Q Consensus 286 l~H~~~~~~~~~~~~~l~~~~~~~~~~v~~a~Dg~~i~l~ 325 (326)
++||++.++... .+++.+++++.+.++.+|+|||+++|+
T Consensus 267 l~H~s~~~~~~~-~~~~~~e~~~~~~~~~~a~dg~~~~l~ 305 (320)
T 1y44_A 267 LTHISARYQGDA-SLELQKEAVDVFPNSVAAYDFLEVNVP 305 (320)
T ss_dssp EECBCTTSCTTH-HHHHHHHHHHHCSSEEECCTTCEEECC
T ss_pred EEeEcCCCCCcc-hHHHHHHHHHhCCCcEeccCCCEEEec
Confidence 999999875432 234555555545689999999999874
No 7
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=100.00 E-value=1.3e-36 Score=268.33 Aligned_cols=246 Identities=17% Similarity=0.216 Sum_probs=189.3
Q ss_pred CcccccCCCceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecC
Q 020397 12 GNGAVSEQGRSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVG 91 (326)
Q Consensus 12 ~~~~~~~~~~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G 91 (326)
.+....+.++|+|+||||| +++|.. .|+.+|++|+. ++..+|||||
T Consensus 15 ~~~~~~~~~~m~i~~LG~g--~~~p~~---------------------------~~~~~~~li~~-----~~~~iLiD~G 60 (268)
T 1zkp_A 15 TENLYFQSNAMKMTVVGFW--GGFPEA---------------------------GEATSGYLFEH-----DGFRLLVDCG 60 (268)
T ss_dssp ---CCCCSSCEEEEEEECB--SSSCCT---------------------------TCCBSEEEEEE-----TTEEEEECCC
T ss_pred ccccccCCCCcEEEEEeCC--CCcCCC---------------------------CCCccEEEEEE-----CCcEEEEECC
Confidence 3444556678999999999 467652 45688999997 7889999999
Q ss_pred ccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCC--CCCCCCCccEEeCHHHHHHHHHhCCcccccccc
Q 020397 92 KTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYS--ATNDIDPTPIFLSQFAMESISTKFPYLVQKKLK 169 (326)
Q Consensus 92 ~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~--~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~ 169 (326)
.+...++.+. ..+.+|++|||||.|.||++|++.+.....+. ...+..+++||+++.+.+.++... +
T Consensus 61 ~~~~~~l~~~---~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~----~---- 129 (268)
T 1zkp_A 61 SGVLAQLQKY---ITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLT----H---- 129 (268)
T ss_dssp TTHHHHHTTT---CCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTC----B----
T ss_pred HHHHHHHHHh---CCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhcc----c----
Confidence 9987666553 46678999999999999999999887541110 000145799999998887665421 1
Q ss_pred cCccccccccceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCc-eeEEEeCCCCCCChhhHHHhhcCCCCC
Q 020397 170 EGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEK-CRVAYISDVSRIPPTTEYVISKSGAGQ 248 (326)
Q Consensus 170 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~-~~i~ysgDt~~~~~~~~~~l~~~~~~~ 248 (326)
+. ...+..+++ ++.+.+++++|++++++|+. +++||+++.+ ++++|+||+.+. +.+.+++++
T Consensus 130 ~~-------~~~~~~~~~--g~~~~~g~~~v~~~~~~H~~--~~~~~~i~~~~~~i~~~GD~~~~-~~~~~~~~~----- 192 (268)
T 1zkp_A 130 EP-------HTKGIPYNP--EETLQIGPFSISFLKTVHPV--TCFAMRITAGNDIVVYSADSSYI-PEFIPFTKD----- 192 (268)
T ss_dssp TT-------TEEEEECCT--TSCEEETTEEEEEEECCSSS--CCEEEEEEETTEEEEECCSCCCC-TTHHHHHTT-----
T ss_pred CC-------ccceEEecC--CCeEEECCEEEEEEECCCCC--CceEEEEEECCeEEEEeCCCCCC-HHHHHHHcC-----
Confidence 10 124466777 88999999999999999997 7999999876 899999999985 567788888
Q ss_pred CcEEEEcCccCCC---CCCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhh-cCCCCeEEeecceEEe
Q 020397 249 LDLLILDTLYKDG---CHNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSK-REGIPVQLSHDGLRIP 323 (326)
Q Consensus 249 ~Dlli~e~~~~~~---~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~-~~~~~v~~a~Dg~~i~ 323 (326)
+|+|++|+++.+. ...+|+++++++++++++++++++++|+++.++..+ +.++++ .+..++.+|+|||+++
T Consensus 193 ~d~li~e~~~~~~~~~~~~~H~~~~~a~~~~~~~~~~~lil~H~~~~~~~~~----~~~~~~~~~~~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 193 ADLFICECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPAD----LVTEAKQIFSGHITLAHSGYVWN 267 (268)
T ss_dssp CSEEEEECCBCTTSCCGGGTCCBHHHHHHHHHHTTCSEEEEESBCSSSCTHH----HHHHHHTTCCSEEEECCTTCEEE
T ss_pred CCEEEEECCCCccccccCCCCCCHHHHHHHHHHcCCCEEEEECCCCCCChHH----HHHHHHHhCCCCEEEEeCCcccc
Confidence 9999999998753 245699999999999999999999999998765432 233333 3445799999999985
No 8
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.97 E-value=4.4e-31 Score=234.10 Aligned_cols=221 Identities=14% Similarity=0.193 Sum_probs=160.3
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhccc--CCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQP--YSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~--~~~~~~~~~~~i 146 (326)
+++++|. +..+|||||.+...++. ....+|++|||||.|.||++|++.|...+. +. .+.++++|
T Consensus 12 ~~~~~i~-------~~~iLiD~G~~~~~~l~-----~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~--~~~~~~~v 77 (280)
T 2e7y_A 12 STWIYYS-------PERILFDAGEGVSTTLG-----SKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMG--DREKPLDV 77 (280)
T ss_dssp EEEEEEG-------GGTEEEEECTTHHHHHG-----GGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSG--GGCCCEEE
T ss_pred eEEEEEC-------CcEEEEECCcchHHHhc-----cCccCCCEEEEeCCchhHHCCHHHHHHHHHHhcc--CCCCCCEE
Confidence 4566664 36799999998865442 356789999999999999999999853210 10 02357999
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEEC-----CEEEEEEEeeeCCCce--eEEEEEc
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVAS-----GLKFVPLPVMHGEDYV--CLGFLFG 219 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~v~~~~~~H~~~~~--~~g~~i~ 219 (326)
|+|+.+. .+...+.+... ..+.. .....++.+++ ++.+.++ +++|+++++.|+. + ++||+|+
T Consensus 78 ~~~~~~~-~l~~~~~~~~~--~~~~~----~~~~~~~~~~~--g~~~~~g~~~~~~~~v~~~~~~H~~--~~~~~g~~i~ 146 (280)
T 2e7y_A 78 FYPEGNR-AVEEYTEFIKR--ANPDL----RFSFNVHPLKE--GERVFLRNAGGFKRYVQPFRTKHVS--SEVSFGYHIF 146 (280)
T ss_dssp EEETTCH-HHHHHHHHHHH--HCGGG----TTTEEEEEECT--TCCEECCCSSCSCEEEEEEECCSCS--SSCCEEEEEE
T ss_pred EECccHH-HHHHHHHHHhh--cccCC----CCceEEEEcCC--CCEEEeCCcccCCEEEEEEEccCCC--CCceEEEEEE
Confidence 9999877 66543221100 00000 00135677888 8999998 8999999999997 6 9999996
Q ss_pred C---------------------------------c-eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCC---
Q 020397 220 E---------------------------------K-CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGC--- 262 (326)
Q Consensus 220 ~---------------------------------~-~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~--- 262 (326)
. + ++++|+|||++. ..+++++ +|+||+||++.+..
T Consensus 147 ~~~~~l~~~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~---~~~~~~~-----~d~li~e~t~~~~~~~~ 218 (280)
T 2e7y_A 147 EVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL---DPEEIRG-----TELLIHECTFLDARDRR 218 (280)
T ss_dssp EEEEEECGGGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC---CHHHHTT-----CSCEEEECCBC------
T ss_pred EcccccCHhhcCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH---HHHhhcC-----CCEEEEeCCcCChhhHH
Confidence 3 2 589999999986 4667778 99999999997642
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhhc-CC-CCeEEeecceEEee
Q 020397 263 HNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSKR-EG-IPVQLSHDGLRIPI 324 (326)
Q Consensus 263 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~~-~~-~~v~~a~Dg~~i~l 324 (326)
..+|+++++++++++++++++++++|+++.++. ..+++.+++++ +. .++.+|+||++++|
T Consensus 219 ~~~H~t~~~a~~~~~~~~~~~lvl~H~~~~~~~--~~~~~~~~~~~~~~~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 219 YKNHAAIDEVMESVKAAGVKKVILYHISTRYIR--QLKSVIKKYREEMPDVEILYMDPRKVFEM 280 (280)
T ss_dssp --CCCBHHHHHHHHHHHTCCEEEEESCCGGGHH--HHHHHHHHHHHHCTTSEEEECCTTSCEEC
T ss_pred hcCCCCHHHHHHHHHHcCCCEEEEEeecCcCcc--hHHHHHHHHHHhCCCceEEEeCCCceeeC
Confidence 468999999999999999999999999987642 22334444544 33 37999999999875
No 9
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.95 E-value=3.2e-27 Score=207.74 Aligned_cols=214 Identities=17% Similarity=0.164 Sum_probs=153.8
Q ss_pred EEEEEeccCCCCccEEEEecCccHHHH-----------HHHhhh--cCCC----CCccEEEecCCChhhhCChhHHhhcc
Q 020397 71 SLLIDHCEGDGKHSYILIDVGKTFREQ-----------ILRWFT--FHKI----PRVDSIILTHEHADAVLGLDDIRAVQ 133 (326)
Q Consensus 71 s~li~~~~~~~~~~~iLiD~G~~~~~~-----------l~~~~~--~~~~----~~i~~I~iTH~H~DH~~gl~~l~~~~ 133 (326)
|++|+. ++.+||||++..-... +...+. ...+ .++|+|||||.|.||++++..+..
T Consensus 14 ~~li~~-----~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH~~~~~~~~~-- 86 (264)
T 3rpc_A 14 TGKLTI-----KNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDTAINSI-- 86 (264)
T ss_dssp EEEEEE-----TTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGGSCHHHHHHS--
T ss_pred EEEEEE-----CCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhhCCCHHHHhh--
Confidence 889997 8899999995432100 000000 0111 278999999999999999876653
Q ss_pred cCCCCCCCCCccEEeC-HHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEeeeCCC--
Q 020397 134 PYSATNDIDPTPIFLS-QFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVMHGED-- 210 (326)
Q Consensus 134 ~~~~~~~~~~~~iy~~-~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~-- 210 (326)
...++||++ ..+...++.. | .+ +++.+ ++++.+++++|+++|+.|...
T Consensus 87 -------~~~~~v~~~~~~~~~~l~~~-----------g-----~~--~~~~~----~~~~~~~~~~i~~~pa~H~~~~~ 137 (264)
T 3rpc_A 87 -------PKSLPIFVQNTADKELITSQ-----------G-----FI--DVRII----FESLEFNGITLRKTGGSHGTVEM 137 (264)
T ss_dssp -------CTTSCEEESSHHHHHHHHHT-----------T-----CS--CEEEC----SSEEEETTEEEEEECCCSSCHHH
T ss_pred -------ccCCeEEEeCHHHHHHHHhc-----------C-----CC--eeEEe----cccEEECCEEEEEeccccCCccc
Confidence 347899999 8777666541 1 10 11222 468899999999999999873
Q ss_pred ----------ceeEEEEEcCc--eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCC---CCCCCCHHHHHHH
Q 020397 211 ----------YVCLGFLFGEK--CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGC---HNTHFCFPQTLEA 275 (326)
Q Consensus 211 ----------~~~~g~~i~~~--~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~---~~~H~~~~~a~~~ 275 (326)
..++||+|+.+ ++++|+|||+++ +.+.+..+. .++|+++++++..... ...|++++||+++
T Consensus 138 ~~~p~~~~~~~~~~g~~i~~~~~~~i~~~GDt~~~-~~~~~~~~~---~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~ 213 (264)
T 3rpc_A 138 YANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWT-SDVEKALLR---FDPNVIIMNTGYAQILGFEDSIIMGTKDIGRM 213 (264)
T ss_dssp HTSTTHHHHHCCCCEEEEECTTSCCEEECCSCCSC-HHHHHHHHH---HCCSEEEEECSCBCBTTCSSCSSCCHHHHHHH
T ss_pred cccccccccccccEEEEEEeCCccEEEEECCcCch-HHHHHHHHH---hCCCEEEEecCccccccccCCcccCHHHHHHH
Confidence 13689999864 799999999997 445554443 2389999999854321 4689999999999
Q ss_pred HHHcCCCeEEEEeeccccCchhhhHHhHhhhhcCC--CCeEEeecceEEee
Q 020397 276 VKRLCPKQALLIGMTHEFDHHKDNEFLAEWSKREG--IPVQLSHDGLRIPI 324 (326)
Q Consensus 276 ~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~~~~--~~v~~a~Dg~~i~l 324 (326)
++.++++++|++|++.........+++.+.+++.+ .++.+..+|+.++|
T Consensus 214 ~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 214 VVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGNNIESHVAVPEDGETITL 264 (264)
T ss_dssp HHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHHTTCTTTEECCCTTCEEEC
T ss_pred HHhCCcCeEEEEccccccccccCHHHHHHHHHHcCCCCcEEecCCCCEEeC
Confidence 99999999999999975543333455666555544 37999999999875
No 10
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.95 E-value=4.3e-26 Score=214.18 Aligned_cols=197 Identities=13% Similarity=0.130 Sum_probs=137.3
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHH----------HHHH--hhh-----------------cCCCCCccEEEecCCC
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFRE----------QILR--WFT-----------------FHKIPRVDSIILTHEH 119 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~----------~l~~--~~~-----------------~~~~~~i~~I~iTH~H 119 (326)
.+|++|+. ++..+|||||.+... ++.. .++ +....+|++|||||.|
T Consensus 20 ~n~~li~~-----~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~i~~v~lTH~H 94 (429)
T 2az4_A 20 GTVIEVAY-----KDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSHAH 94 (429)
T ss_dssp CCEEEEEE-----TTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSEEEEECSCSC
T ss_pred CeEEEEEE-----CCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccccCCEEEECCch
Confidence 35899997 788999999987521 1211 011 2466789999999999
Q ss_pred hhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCcc-cccccccCccccccccceeeEeccCCCCceEECCE
Q 020397 120 ADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYL-VQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGL 198 (326)
Q Consensus 120 ~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~-~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 198 (326)
.||++|++.|. ++++||+++.+.+.+....... .+.. .... .......++.++. ++.+.++++
T Consensus 95 ~DHiggl~~l~-----------~~~~iy~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~--g~~~~~g~~ 158 (429)
T 2az4_A 95 LDHSRMINYLD-----------PAVPLYTLKETKMILNSLNRKGDFLIP-SPFE--EKNFTREMIGLNK--NDVIKVGEI 158 (429)
T ss_dssp HHHHTTGGGBC-----------TTSCEEEEHHHHHHHHHHTTTSCSSCC-CTTS--CTTCCCCCEEECT--TCEEEETTE
T ss_pred HHHhCcHhHhc-----------CCCCEEECHHHHHHHHHHHHhCccccc-cccc--cccccceEEEeCC--CCeEEECCE
Confidence 99999998774 2688999999987776533211 0000 0000 0001235577887 899999999
Q ss_pred EEEEEEeeeCCCceeEEEEEcCc-eeEEEeCCCCCCCh------hhHHHhhcCCCCCCcEEEEcCccCCCC-------CC
Q 020397 199 KFVPLPVMHGEDYVCLGFLFGEK-CRVAYISDVSRIPP------TTEYVISKSGAGQLDLLILDTLYKDGC-------HN 264 (326)
Q Consensus 199 ~v~~~~~~H~~~~~~~g~~i~~~-~~i~ysgDt~~~~~------~~~~~l~~~~~~~~Dlli~e~~~~~~~-------~~ 264 (326)
+|+++++.|+. .+++||+|+.+ ++++|+||+..... .+.+..++ +|+||+|||+.... ..
T Consensus 159 ~v~~~~~~H~~-~gs~~~~i~~~~~~i~~tGD~~~~~~~~~~~~~~~~~~~~-----~d~Li~Est~~~~~~~~~~~~~~ 232 (429)
T 2az4_A 159 SVEIVPVDHDA-YGASALLIRTPDHFITYTGDLRLHGHNREETLAFCEKAKH-----TELLMMEGVSISFPEREPDPAQI 232 (429)
T ss_dssp EEEEEECCCSS-TTCEEEEEEETTEEEEECCSCCSSSTTHHHHHHHHHHHTT-----CSEEEEECCGGGSCCCCCCTTBC
T ss_pred EEEEEECCCCC-hhhEEEEEEeCCcEEEECCCcccCCCchHHHHHHHHhccC-----CCEEEECCCCcCcccccccccCC
Confidence 99999999954 26999999876 89999999974321 35555556 99999999986521 24
Q ss_pred CCCCHHHHHHHHHHc---CCCeEEEEeeccc
Q 020397 265 THFCFPQTLEAVKRL---CPKQALLIGMTHE 292 (326)
Q Consensus 265 ~H~~~~~a~~~~~~~---~~k~lvl~H~~~~ 292 (326)
+|.+.+++.+.+.++ .+++++++|++..
T Consensus 233 ~~~s~~~~~~~i~~~~~~~~~rlil~h~~~~ 263 (429)
T 2az4_A 233 AVVSEEDLVQHLVRLELENPNRQITFNGYPA 263 (429)
T ss_dssp CCCSHHHHHHHHHHHHHTCSSSCEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHhCCCcEEEEEeccc
Confidence 588888875544332 3678999998753
No 11
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.94 E-value=2e-26 Score=199.03 Aligned_cols=164 Identities=20% Similarity=0.297 Sum_probs=132.4
Q ss_pred EEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCH
Q 020397 71 SLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQ 150 (326)
Q Consensus 71 s~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~ 150 (326)
|++|+. ++..+|||||.+... ...+.++|+|||||.|.||+ |+..+.... ..+++||+++
T Consensus 39 ~~li~~-----~~~~iliDpg~~~~~-------~~~~~~id~VliTH~H~DH~-~~~~l~~~~-------~~~~~v~~~~ 98 (235)
T 3kl7_A 39 SLMLTY-----DNHSIQVDPVSEYAD-------YTTFPKADIILITHEHGDHL-DPKAIQAVE-------KSDTEIIANE 98 (235)
T ss_dssp EEEEEE-----TTEEEEESCCTTTCC-------TTSSCCCSEEEECCSSTTTC-CHHHHHHHC-------CTTCEEEECH
T ss_pred EEEEEE-----CCEEEEECCCCCccc-------hhhCCCCCEEEECCCccccC-CHHHHHHhh-------cCCCEEEEcH
Confidence 899997 788999999976421 13556899999999999999 777777642 3579999999
Q ss_pred HHHHHHHHhCCcccccccccCccccccccceeeEeccCCCC-ceEECCEEEEEEEeeeCCC--------ceeEEEEEcCc
Q 020397 151 FAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDK-PFVASGLKFVPLPVMHGED--------YVCLGFLFGEK 221 (326)
Q Consensus 151 ~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~~~~v~~~~~~H~~~--------~~~~g~~i~~~ 221 (326)
.+.+.+.+ ...+++ |+ .+.+++++|+++|+.|... ..+.||+|+.+
T Consensus 99 ~~~~~l~~-----------------------~~~l~~--g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~ 153 (235)
T 3kl7_A 99 NSQKKLGK-----------------------GKVLKN--GDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFD 153 (235)
T ss_dssp HHHHHHTC-----------------------SEECCT--TCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEET
T ss_pred HHHHHhcC-----------------------cEEecC--CCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeC
Confidence 88765421 144566 78 8899999999999999752 12689999877
Q ss_pred -eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeecc
Q 020397 222 -CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLCPKQALLIGMTH 291 (326)
Q Consensus 222 -~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~ 291 (326)
++++|+|||.+.++ + +.+.+ +|++++++.. ..|+++++|+++++++++++++++|++.
T Consensus 154 g~~i~~~GDt~~~~~-~-~~l~~-----~Dv~il~~~~-----~~h~~~~ea~~~~~~l~~k~vip~H~~~ 212 (235)
T 3kl7_A 154 GLRVYIAGDTEDIPE-M-KDLKD-----IDIAFLPVNQ-----PYTMTVSQAAKAARMFSPKILYPYHYGD 212 (235)
T ss_dssp TEEEEECCSCCSCGG-G-GGCCS-----CSEEEEECCT-----TTSCCHHHHHHHHHHHCCSEEEEESCTT
T ss_pred CeEEEEECCCCchhh-H-HhhcC-----CCEEEECCCC-----CcccCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 89999999998743 3 23445 9999999863 5799999999999999999999999998
No 12
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.94 E-value=1.1e-25 Score=206.59 Aligned_cols=223 Identities=13% Similarity=0.113 Sum_probs=152.0
Q ss_pred EEEEEeccCCCC-ccEEEEe--cCccHH----------HHHHHh-----hh--------cC---CCCCccEEEecCCChh
Q 020397 71 SLLIDHCEGDGK-HSYILID--VGKTFR----------EQILRW-----FT--------FH---KIPRVDSIILTHEHAD 121 (326)
Q Consensus 71 s~li~~~~~~~~-~~~iLiD--~G~~~~----------~~l~~~-----~~--------~~---~~~~i~~I~iTH~H~D 121 (326)
|++|+. + +..|||| ||.+.. .|+.+. +. .. ++.+||+|||||.|.|
T Consensus 47 ~~lI~~-----~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~l~~id~VliTH~H~D 121 (360)
T 2wyl_A 47 GIWLKS-----EGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHND 121 (360)
T ss_dssp EEEEEC-----TTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCCSEEECSBSCTT
T ss_pred EEEEEe-----CCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCHHHcCCCCEEEECCCchh
Confidence 889986 4 7899999 887642 122221 00 12 2467999999999999
Q ss_pred hhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEE
Q 020397 122 AVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFV 201 (326)
Q Consensus 122 H~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~ 201 (326)
|+ |+..+...... ...+++||+|+.+.+.+++. . ++..+++.++. ++.+.+++++|+
T Consensus 122 Hi-g~~~l~~l~~~----~~~~~~v~~p~~~~~~l~~~-g---------------~~~~~~~~l~~--g~~~~~g~~~v~ 178 (360)
T 2wyl_A 122 HI-DVNVAAAVMQN----CADDVPFIGPKTCVDLWIGW-G---------------VPKERCIVVKP--GDVVKVKDIEIH 178 (360)
T ss_dssp TC-CHHHHHHHHHH----SCTTCCEEECHHHHHHHHHH-T---------------CCGGGEEECCT--TCEEEETTEEEE
T ss_pred cC-CHHHHHHHHhc----CCCCCEEEEcHHHHHHHHHc-C---------------CChheEEEcCC--CCEEEECCEEEE
Confidence 99 54443322100 02379999999988766541 1 11134567777 899999999999
Q ss_pred EEEeeeCC-------------------CceeEEEEEcCc-eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCC
Q 020397 202 PLPVMHGE-------------------DYVCLGFLFGEK-CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDG 261 (326)
Q Consensus 202 ~~~~~H~~-------------------~~~~~g~~i~~~-~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~ 261 (326)
++++.|.. ...++||+|+.+ ++++|+|||.+.+ .+.++.+. .++|++++++.....
T Consensus 179 ~~~~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~-~~~~i~~~---~~~Dv~il~~g~~~~ 254 (360)
T 2wyl_A 179 ALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSN-YYAKHGNE---HQIDVALGSYGENPR 254 (360)
T ss_dssp EEECCCC------------------CCTTTBEEEEEEETTEEEEECTTCCCCT-THHHHHHH---SCCCEEEEEBCCCCT
T ss_pred EEeccCcccccccccccccccccccccCcccEEEEEEECCcEEEEeCCCCcCH-HHHHHhhC---CCCCEEEecCCCCcc
Confidence 99998852 125899999876 8999999999864 44444443 138999997764222
Q ss_pred CCCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhh------cCCCCeEEeecceEEeec
Q 020397 262 CHNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSK------REGIPVQLSHDGLRIPID 325 (326)
Q Consensus 262 ~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~------~~~~~v~~a~Dg~~i~l~ 325 (326)
...+|+++++|+++++++++++++++|++.........+++.+..+ ..+.++.++.+|+++.++
T Consensus 255 ~~~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~ 324 (360)
T 2wyl_A 255 GITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWP 324 (360)
T ss_dssp TCCCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEET
T ss_pred cccCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEec
Confidence 3357999999999999999999999999876422111223333332 124567788999998874
No 13
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.94 E-value=1.6e-25 Score=206.69 Aligned_cols=223 Identities=13% Similarity=0.060 Sum_probs=154.1
Q ss_pred EEEEEeccCCCC-ccEEEEe--cCccHH----------HHHHHhh------------h-cC---CCCCccEEEecCCChh
Q 020397 71 SLLIDHCEGDGK-HSYILID--VGKTFR----------EQILRWF------------T-FH---KIPRVDSIILTHEHAD 121 (326)
Q Consensus 71 s~li~~~~~~~~-~~~iLiD--~G~~~~----------~~l~~~~------------~-~~---~~~~i~~I~iTH~H~D 121 (326)
|++|+. + +..|||| ||.+.. .|+.+.. + .. ++.+||+|||||.|.|
T Consensus 71 ~~lI~~-----~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~~~~iD~IliTH~H~D 145 (379)
T 3bv6_A 71 GIWLKS-----AGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEIDAVLASHDHAD 145 (379)
T ss_dssp EEEEEE-----TTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCCSEEECSBCSGG
T ss_pred EEEEEe-----CCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHHCCCCCEEEECCCCcc
Confidence 889986 4 7899999 887642 1222210 0 12 2568999999999999
Q ss_pred hhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEE
Q 020397 122 AVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFV 201 (326)
Q Consensus 122 H~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~ 201 (326)
|+ |++.+...... ..++++||+|+.+.+.++.. . ++..+++.++. |+.+.+++++|+
T Consensus 146 Hi-g~~~l~~l~~~----~~~~~~v~~~~~~~~~l~~~-g---------------~~~~~~~~l~~--g~~~~~g~~~v~ 202 (379)
T 3bv6_A 146 HI-DVNVAAAVLQN----CGEHVKFIGPQACVDLWLGW-G---------------VPQERCIVAKV--GDVLEIGDVKIR 202 (379)
T ss_dssp GC-CHHHHHHHHHH----SCTTCEEEECHHHHHHHHHH-T---------------CCGGGEEECCT--TCEEEETTEEEE
T ss_pred cC-ChHHHHHHHhc----CCCCcEEEecHHHHHHHHHc-C---------------CChhhEEEeCC--CCEEEECCEEEE
Confidence 99 55444332100 01379999999988776541 0 11134567777 899999999999
Q ss_pred EEEeeeCC-------------C-------ceeEEEEEcCc-eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCC
Q 020397 202 PLPVMHGE-------------D-------YVCLGFLFGEK-CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKD 260 (326)
Q Consensus 202 ~~~~~H~~-------------~-------~~~~g~~i~~~-~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~ 260 (326)
++++.|.. + ..++||+|+.+ ++++|+|||.+.+ .+.+..+. .++|++++.+....
T Consensus 203 ~~~~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~-~~~~i~~~---~~~Dv~il~~g~~~ 278 (379)
T 3bv6_A 203 VLDSFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSN-YYAKHGND---YQIDVALLSYGENP 278 (379)
T ss_dssp EEECCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCT-THHHHHHH---SCCSEEEEEBCCCC
T ss_pred EEecccccccccccccccccccccccccCCceEEEEEEeCCeEEEEeCCCCccH-HHHHHhhc---CCCCEEEecCCCCc
Confidence 99998841 1 24899999876 8999999999864 44444443 13899999775422
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhh---c---CCCCeEEeecceEEeec
Q 020397 261 GCHNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSK---R---EGIPVQLSHDGLRIPID 325 (326)
Q Consensus 261 ~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~---~---~~~~v~~a~Dg~~i~l~ 325 (326)
.....|+++++|+++++++++++++++|++.........+++.+..+ . +..++.++.+|++++++
T Consensus 279 ~~~~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~ 349 (379)
T 3bv6_A 279 RGVTDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYP 349 (379)
T ss_dssp TTCCCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEET
T ss_pred ccccccCCHHHHHHHHHHcCCCEEEEEeecccccccCCHHHHHHHHHhhhhhhcCCCceEEccCCcEEEec
Confidence 23467999999999999999999999999876422222233333332 1 24567789999999874
No 14
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.92 E-value=4.1e-24 Score=206.51 Aligned_cols=213 Identities=14% Similarity=0.179 Sum_probs=143.7
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHH----------HHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCC
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQI----------LRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSAT 138 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l----------~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~ 138 (326)
.+|++|+. ++..+|||||.+....- .+.+ .....+|++|||||.|.||++|++.|.....
T Consensus 30 ~n~~li~~-----~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l-~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~---- 99 (562)
T 3bk2_A 30 KNITVFRF-----RDEIFVLDGGLAFPEEGMPGVDLLIPRVDYL-IEHRHKIKAWVLTHGHEDHIGGLPFLLPMIF---- 99 (562)
T ss_dssp CCEEEEEE-----TTEEEEECCCCBCCCTTSTTCCEEEECCHHH-HHTGGGEEEEECCCCCHHHHTTHHHHHHHHH----
T ss_pred CCEEEEEE-----CCeEEEEECCCCCCccccccccccccchhhh-hcCcccCcEEEECCCChHHhCCHHHHHHhhc----
Confidence 45999997 78899999996422100 0001 1246789999999999999999999986421
Q ss_pred CCCCCccEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECC-EEEEEEEeeeCCCceeEEEE
Q 020397 139 NDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASG-LKFVPLPVMHGEDYVCLGFL 217 (326)
Q Consensus 139 ~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~-~~v~~~~~~H~~~~~~~g~~ 217 (326)
.+..+++||+++.+.+.++..+... + +.. ....++.++. ++.+.+++ ++|++++++|+. .++++|+
T Consensus 100 ~~~~~~pIy~~~~t~~~l~~~l~~~-------~--~~~-~~~~~~~v~~--g~~~~lg~~~~v~~~~~~H~~-~gs~~~~ 166 (562)
T 3bk2_A 100 GKESPVPIYGARLTLGLLRGKLEEF-------G--LRP-GAFNLKEISP--DDRIQVGRYFTLDLFRMTHSI-PDNSGVV 166 (562)
T ss_dssp CSCCCSEEEEEHHHHHHHHHHHHHT-------T--CCS-TTSEEEEECT--TCEEEETTTEEEEEEECCCSS-SSCEEEE
T ss_pred cccCCceEEeCHHHHHHHHHHHHHc-------C--CCc-CCceEEEECC--CCEEEeCCCEEEEEEECCCCC-cccEEEE
Confidence 1234799999999987775543211 0 000 0245677888 89999999 999999999964 2699999
Q ss_pred EcCc-eeEEEeCCCCCC--------C--hhhHHHh-hcCCCCCCcEEEEcCccCCCCCCCCCCHH-----HHHHHHHHcC
Q 020397 218 FGEK-CRVAYISDVSRI--------P--PTTEYVI-SKSGAGQLDLLILDTLYKDGCHNTHFCFP-----QTLEAVKRLC 280 (326)
Q Consensus 218 i~~~-~~i~ysgDt~~~--------~--~~~~~~l-~~~~~~~~Dlli~e~~~~~~~~~~H~~~~-----~a~~~~~~~~ 280 (326)
|+.+ .+++|+||+... . +.+.+.. ++ +|+|++|+|+... .+|...+ ++.+++++.+
T Consensus 167 i~~~~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~-----~d~Li~EsT~~~~--~g~~~~e~~v~~~l~~~~~~~~ 239 (562)
T 3bk2_A 167 IRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEG-----VLLLIADATNAER--PGYTPSEMEIAKELDRVIGRAP 239 (562)
T ss_dssp EEETTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHC-----CSEEEEECTTTTC--CSCCCCHHHHHHHHHHHHHHCS
T ss_pred EEECCeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccC-----CCEEEecccCCCC--CCCCChHHHHHHHHHHHHHhCC
Confidence 9876 899999999531 1 1222333 46 9999999998742 2333322 3334555554
Q ss_pred CCeEEEEeeccccCchhhhHHhHhhhhcCCCCeEE
Q 020397 281 PKQALLIGMTHEFDHHKDNEFLAEWSKREGIPVQL 315 (326)
Q Consensus 281 ~k~lvl~H~~~~~~~~~~~~~l~~~~~~~~~~v~~ 315 (326)
++++++||++...+ .+++.+.+++.+.+|.+
T Consensus 240 -grvii~~fas~~~r---~q~il~~a~~~~r~V~v 270 (562)
T 3bk2_A 240 -GRVFVTTFASHIHR---IQSVIWAAEKYGRKVAM 270 (562)
T ss_dssp -SCEEEECCTTCHHH---HHHHHHHHHHTTCEEEE
T ss_pred -CEEEEEEccccchH---HHHHHHHHHHhCCEEEE
Confidence 89999999975543 23455555556555543
No 15
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.91 E-value=7.4e-24 Score=198.59 Aligned_cols=171 Identities=16% Similarity=0.075 Sum_probs=119.1
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHHHHhhh--cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFT--FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
.+|++|+. ++..+|||||..........+. +..+.+||+|||||.|.||++|++.|... ..+.+|
T Consensus 14 ~s~~li~~-----~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~--------~~~~~I 80 (431)
T 3iek_A 14 GSAHLLLA-----GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFRE--------GYRGPV 80 (431)
T ss_dssp CCCEEEEE-----TTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHT--------TCCSCE
T ss_pred CcEEEEEE-----CCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHc--------CCCCeE
Confidence 46999997 7899999999832221111111 45567999999999999999999999863 347899
Q ss_pred EeCHHHHHHHHHhCCcc--ccc-ccccCccccccc--cceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCc
Q 020397 147 FLSQFAMESISTKFPYL--VQK-KLKEGQEVRRVA--QLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEK 221 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~--~~~-~~~~g~~~~~~~--~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~ 221 (326)
|+++.+.+.+...+... +.. ..+.. ..+. ...++.++. ++.+.+++++|+++++.|.. ++.+|+++.+
T Consensus 81 y~t~~t~~l~~~~l~d~~~~~~~~~y~~---~~~~~~~~~~~~l~~--~~~~~l~g~~v~~~~agH~~--Gs~~~~i~~~ 153 (431)
T 3iek_A 81 YATRATVLLMEIVLEDALKVMDEPFFGP---EDVEEALGHLRPLEY--GEWLRLGALSLAFGQAGHLP--GSAFVVAQGE 153 (431)
T ss_dssp EECHHHHHHHHHHHHHHHHHCSSCSSCH---HHHHHHHHTEEECCT--TCCEEETTEEEEEEECCSST--TCEEEEEEET
T ss_pred EEcHHHHHHHHHHHHHHHhhcccCCCCH---HHHHHHHhccEEcCC--CCeEEeCCEEEEEEeCCCCc--CceEEEEEEC
Confidence 99999987665432110 000 00000 0000 023567777 89999999999999999998 7899999876
Q ss_pred -eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCC
Q 020397 222 -CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDG 261 (326)
Q Consensus 222 -~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~ 261 (326)
++++|+||++..++.++... ....++|+||+|+||...
T Consensus 154 ~~~ilfsGD~~~~~~~~l~~~--~~~~~~D~LI~EsTy~~~ 192 (431)
T 3iek_A 154 GRTLVYSGDLGNREKDVLPDP--SLPPLADLVLAEGTYGDR 192 (431)
T ss_dssp TEEEEECCCCCCTTSSSSCCC--CBCCCCSEEEEECTTTTC
T ss_pred CEEEEEeCCCCCCCCcccCCc--cccCCccEEEEEcccCCc
Confidence 89999999987544332100 112349999999999764
No 16
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.90 E-value=1.5e-22 Score=194.74 Aligned_cols=215 Identities=13% Similarity=0.160 Sum_probs=144.2
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHH-----------HHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCC
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQ-----------ILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSA 137 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~-----------l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~ 137 (326)
.+|++|+. ++..+|||||.++... +... .....+|++|||||.|.||++|++.|...
T Consensus 22 ~n~~li~~-----~~~~iLID~G~~~~~~~~~g~d~iip~~~~l--~~~~~~Id~I~lTH~H~DHiggl~~l~~~----- 89 (555)
T 3zq4_A 22 KNTYAVQF-----QDEIVLIDAGIKFPEDELLGIDYVIPDYTYL--VKNEDKIKGLFITHGHEDHIGGIPYLLRQ----- 89 (555)
T ss_dssp CCEEEEEE-----TTEEEEEEECCBCCCTTSTTCSEEEECCHHH--HTTTTTEEEEEESCCCHHHHTTHHHHHTT-----
T ss_pred CEEEEEEE-----CCeEEEEeCCCCCCccccccccccccCHHHH--hcCccCCCEEEECCCchhhhCCHHHHHHh-----
Confidence 46999997 7899999999753211 1111 24668999999999999999999999853
Q ss_pred CCCCCCccEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEE
Q 020397 138 TNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFL 217 (326)
Q Consensus 138 ~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~ 217 (326)
.+++||+++.+.+.+...+...- ..+...++.++. ++.+.+++++|++++++|+. .++++|+
T Consensus 90 ----~~~pIy~t~~t~~ll~~~l~~~~-----------~~~~~~~~~v~~--g~~~~ig~~~v~~~~~~H~~-pgs~~~~ 151 (555)
T 3zq4_A 90 ----VNIPVYGGKLAIGLLRNKLEEHG-----------LLRQTKLNIIGE--DDIVKFRKTAVSFFRTTHSI-PDSYGIV 151 (555)
T ss_dssp ----CCCCEEECHHHHHHHHHHHHHHS-----------TTTTCCEEECCT--TCCEEETTEEEEEEEEBCSS-SSEEEEE
T ss_pred ----cCceEEECHHHHHHHHHHHHHcC-----------ccCCCceEEeCC--CCEEEECCEEEEEEeCCCCC-cCcEEEE
Confidence 36789999999877765432110 011235577888 89999999999999999954 2799999
Q ss_pred EcCc-eeEEEeCCCCCCChh-----hHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHc---CCCeEEEEe
Q 020397 218 FGEK-CRVAYISDVSRIPPT-----TEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRL---CPKQALLIG 288 (326)
Q Consensus 218 i~~~-~~i~ysgDt~~~~~~-----~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~---~~k~lvl~H 288 (326)
++.+ .+++|+||+...... -++.+......++|+|++|+|+..... ...+-+++.+.+.++ ..+++++++
T Consensus 152 i~~~~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~-~~~se~~v~~~i~~~~~~~~grvii~~ 230 (555)
T 3zq4_A 152 VKTPPGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPE-FTMSERRVGESIHDIFRKVDGRIIFAT 230 (555)
T ss_dssp EEETTEEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCS-CCCCHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred EEECCcEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCC-CCCCHHHHHHHHHHHHHhCCCEEEEEE
Confidence 9877 899999999753220 111221000123999999999986322 234444444444332 247889998
Q ss_pred eccccCchhhhHHhHhhhhcCCCCeEEeecc
Q 020397 289 MTHEFDHHKDNEFLAEWSKREGIPVQLSHDG 319 (326)
Q Consensus 289 ~~~~~~~~~~~~~l~~~~~~~~~~v~~a~Dg 319 (326)
|+....+ .+++...+++++.. ++.+|
T Consensus 231 fasnv~R---~q~il~~a~~~gr~--v~v~g 256 (555)
T 3zq4_A 231 FASNIHR---LQQVIEAAVQNGRK--VAVFG 256 (555)
T ss_dssp CTTCHHH---HHHHHHHHHTTTCE--EEEES
T ss_pred ChhHHHH---HHHHHHHHHHHCCE--EEEeC
Confidence 8754433 24455556666543 44455
No 17
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.89 E-value=4.7e-22 Score=169.81 Aligned_cols=155 Identities=12% Similarity=0.162 Sum_probs=115.4
Q ss_pred cccccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 66 YRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 66 ~r~~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
.++++|++|+. ++..||||||.+.. .+ .....++|+|||||.|.||++ ++.+. ...+
T Consensus 17 ~~~~~~~li~~-----~~~~iLiD~g~~~~----~~--~~~~~~id~VliTH~H~DH~~-~~~l~-----------~~~~ 73 (220)
T 1vjn_A 17 WFGHACFALEM-----EGKTIVTDPFDESV----GY--PIPNVTADVVTESHQHFDHNA-HHLVK-----------GNFR 73 (220)
T ss_dssp EEETTEEEEEE-----TTEEEEESCCC-----------CCCCCBCSEEECSSCC---CG-GGGCB-----------SSCE
T ss_pred EccCCEEEEEE-----CCEEEEEcCCCCcC----CC--CcCCCCcCEEEECCCCCCCCC-chHhc-----------CCCE
Confidence 46789999997 78899999998731 11 234679999999999999997 65332 0122
Q ss_pred EEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEeeeCCC-----ceeEEEEEcC
Q 020397 146 IFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVMHGED-----YVCLGFLFGE 220 (326)
Q Consensus 146 iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~-----~~~~g~~i~~ 220 (326)
++ .. +..+++++++|+++++.|... ..++||+|+.
T Consensus 74 vi--------------------------------------~~--~g~~~~~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~ 113 (220)
T 1vjn_A 74 VI--------------------------------------DR--PGAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEG 113 (220)
T ss_dssp EE--------------------------------------CS--SEEEEETTEEEEEEEEEEC-------CEEEEEEEEE
T ss_pred EE--------------------------------------cC--CCeEEECCEEEEEEeeecCCCCCccCCCcEEEEEEE
Confidence 22 01 225667899999999999862 2479999987
Q ss_pred c-eeEEEeCCCCCCCh-hhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeecccc
Q 020397 221 K-CRVAYISDVSRIPP-TTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLCPKQALLIGMTHEF 293 (326)
Q Consensus 221 ~-~~i~ysgDt~~~~~-~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~ 293 (326)
+ ++++|+||+.+.++ +.++.+.+ +|++++++.. ..|+++++|+++++++++++++++|++...
T Consensus 114 ~g~~i~~~GDt~~~~~~~~~~~~~~-----~Dvlil~~g~-----~~h~~~~~a~~~~~~~~~k~vi~~H~~~~~ 178 (220)
T 1vjn_A 114 EGIKVCHLGDLGHVLTPAQVEEIGE-----IDVLLVPVGG-----TYTIGPKEAKEVADLLNAKVIIPMHYKTKY 178 (220)
T ss_dssp TTEEEEECTTCCSCCCHHHHHHHCC-----CSEEEEECCS-----SSSCCHHHHHHHHHHTTCSEEEEESCCCSS
T ss_pred CCeEEEEeCCCCCcchHHHHHhhCC-----CCEEEEcCCC-----cCcCCHHHHHHHHHhcCCCEEEEEeccccc
Confidence 7 89999999998764 34555556 9999999853 469999999999999999999999999875
No 18
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.89 E-value=2.3e-22 Score=197.29 Aligned_cols=250 Identities=15% Similarity=0.150 Sum_probs=151.1
Q ss_pred CCceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecCccHHHH-
Q 020397 19 QGRSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQ- 97 (326)
Q Consensus 19 ~~~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~~~~~- 97 (326)
...|+|++||+|++. +.+|++|+. ++..+|||||.+....
T Consensus 186 ~~~m~i~~LG~~~~v----------------------------------g~s~~LI~~-----~~~~ILID~G~~~~~~~ 226 (651)
T 3af5_A 186 SRWIRITGLGGFREV----------------------------------GRSALLVQT-----DESFVLVDFGVNVAMLN 226 (651)
T ss_dssp CSCEEEEEEECSSSS----------------------------------SCCEEEEEE-----SSCEEEECCCCCGGGTT
T ss_pred CCceEEEEEecCCCC----------------------------------CCcEEEEEE-----CCcEEEEeCCCChhccc
Confidence 456999999999432 245999997 7889999999874310
Q ss_pred -HHHhhhc-----C--CC--CCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCcccccc
Q 020397 98 -ILRWFTF-----H--KI--PRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKK 167 (326)
Q Consensus 98 -l~~~~~~-----~--~~--~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~ 167 (326)
-...++. . ++ .+||+|||||.|.||++|++.|.... ..+.+||+++.+.+.+...+.......
T Consensus 227 ~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~~~-------~~~~pIy~t~~t~~ll~~~l~d~~~~~ 299 (651)
T 3af5_A 227 DPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYN-------LFDGPIYTTPPTRDLMVLLQKDFIEIQ 299 (651)
T ss_dssp CHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHHTT-------CCCSCEEECHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHhcC-------CCCceEEEcHHHHHHHHHHHHHHHHHh
Confidence 0111111 1 34 78999999999999999999998631 036799999998876543221000000
Q ss_pred ccc--Ccccc--ccc--cceeeEeccCCCCceEE-CCEEEEEEEeeeCCCceeEEEEEcCc-e--eEEEeCCCCCCChhh
Q 020397 168 LKE--GQEVR--RVA--QLDWKIIEEDCDKPFVA-SGLKFVPLPVMHGEDYVCLGFLFGEK-C--RVAYISDVSRIPPTT 237 (326)
Q Consensus 168 ~~~--g~~~~--~~~--~~~~~~i~~~~~~~~~~-~~~~v~~~~~~H~~~~~~~g~~i~~~-~--~i~ysgDt~~~~~~~ 237 (326)
... ...+. .+. ...++.++. ++.+.+ ++++|+++++.|.. ++++|.++.+ . +++|+||+++.++.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~l~~--g~~~~l~ggi~v~~~~~gH~~--Gs~~~~i~~~~~~~~ilftGD~~~~~~~l 375 (651)
T 3af5_A 300 QSNGQDPLYRPRDIKEVIKHTITLDY--GEVRDISPDIRLTLHNAGHIL--GSAIVHLHIGNGLHNIAITGDFKFIPTRL 375 (651)
T ss_dssp HHTTCCCSSCHHHHHHHHHTEEECCT--TCCEEEETTEEEEEEECSSST--TCEEEEEEETTTTTCEEECCSCCCSCCSS
T ss_pred hhcccCCCCCHHHHHHhhhcEEEeCC--CCEEEecCCEEEEEecCCCCc--CcEEEEEEECCCceEEEEeCCCCCCcccc
Confidence 000 00000 000 013466777 899999 99999999999987 7899999865 6 999999998765433
Q ss_pred HHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHH----HHHHHHHc--CCCeEEEEeeccccCc-hhhhHHhHhhhhcCC
Q 020397 238 EYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQ----TLEAVKRL--CPKQALLIGMTHEFDH-HKDNEFLAEWSKREG 310 (326)
Q Consensus 238 ~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~----a~~~~~~~--~~k~lvl~H~~~~~~~-~~~~~~l~~~~~~~~ 310 (326)
+... .....++|+|++|+||.... ..|.+..+ ..+.+++. ...++++..|+ ..+ ++....+.+..++-.
T Consensus 376 l~~~-~~~~~~~DvLI~EsT~~~~~-~~h~s~~~~~~~l~~~i~~~l~~~g~vlIp~fa--vgR~qell~~l~~~~~~~~ 451 (651)
T 3af5_A 376 LEPA-NAKFPRLETLVMESTYGGAN-DIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGG 451 (651)
T ss_dssp CCCC-CCBCSSCSEEEEECTTCSTT-CCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCT--TTHHHHHHHHHHHHHTTTC
T ss_pred cccc-cccCCCCCEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHhCCCEEEEeccC--ccHHHHHHHHHHHhhhhcC
Confidence 3210 00123499999999997532 22444332 23333332 33566666555 233 222222322222111
Q ss_pred CCeEEeecceEE
Q 020397 311 IPVQLSHDGLRI 322 (326)
Q Consensus 311 ~~v~~a~Dg~~i 322 (326)
..+.+..|||..
T Consensus 452 l~~~I~~dg~a~ 463 (651)
T 3af5_A 452 IEVPIYLDGMIW 463 (651)
T ss_dssp CCSCEEEESSHH
T ss_pred CCCcEEEechHH
Confidence 125666788754
No 19
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.88 E-value=4.8e-22 Score=188.07 Aligned_cols=180 Identities=16% Similarity=0.145 Sum_probs=118.7
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHH---HHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFRE---QILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~---~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
.+|++|+. ++..+|||||.+... .....+.+.++.+||+|||||.|.||++|++.+.... ..+.+
T Consensus 25 ~s~~li~~-----~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~-------~~~~~ 92 (459)
T 2i7t_A 25 RSCIILEF-----KGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKT-------SFKGR 92 (459)
T ss_dssp SCEEEEEE-----TTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHS-------SCCSE
T ss_pred CCEEEEEE-----CCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhc-------CCCCC
Confidence 56999997 788999999975210 1111122457789999999999999999999987542 23578
Q ss_pred EEeCHHHHHHHHHhCCcc--ccc-----ccccCccccccc--cceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEE
Q 020397 146 IFLSQFAMESISTKFPYL--VQK-----KLKEGQEVRRVA--QLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGF 216 (326)
Q Consensus 146 iy~~~~~~~~l~~~~~~~--~~~-----~~~~g~~~~~~~--~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~ 216 (326)
||+++.+.+.+...+... +.. ..+.. ..+. ...++.++. ++.+.+++++|+++++.|.. ++.+|
T Consensus 93 iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~gi~v~~~~~GH~~--Gs~~~ 165 (459)
T 2i7t_A 93 TFMTHATKAIYRWLLSDYVKVSNISADDMLYTE---TDLEESMDKIETINF--HEVKEVAGIKFWCYHAGHVL--GAAMF 165 (459)
T ss_dssp EEEEHHHHHHHHHHHHHHCC---------CCCH---HHHHHHGGGEEEECT--TCCEEETTEEEEEEECCSST--TCEEE
T ss_pred EEechHHHHHHHHHHHHHHHHhcccccccccCH---HHHHHHHhccEEeCC--CCEEEECCEEEEEEeCCCcc--CcEEE
Confidence 999998876543322100 000 00000 0000 014567777 88999999999999999998 78999
Q ss_pred EEcCc-eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHH
Q 020397 217 LFGEK-CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQ 271 (326)
Q Consensus 217 ~i~~~-~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~ 271 (326)
+++.+ ++++|+||+...++... ........++|+||+|+||... .|.+.++
T Consensus 166 ~i~~~~~~il~sGD~~~~~~~~~-~~~~~~~~~~D~Li~Esty~~~---~~~~~~~ 217 (459)
T 2i7t_A 166 MIEIAGVKLLYTGDFSRQEDRHL-MAAEIPNIKPDILIIESTYGTH---IHEKREE 217 (459)
T ss_dssp EEEETTEEEEECCSCCCC------CCCCCCSSCCSEEEEECTTTTC---CCCCHHH
T ss_pred EEEECCcEEEEeCCCCCCCCccc-CCCCcCCCCCeEEEECCCCCCC---CCCChHH
Confidence 99876 89999999998643221 1111112359999999999752 3445444
No 20
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.88 E-value=4e-22 Score=195.23 Aligned_cols=232 Identities=11% Similarity=0.068 Sum_probs=141.7
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHH----HHHHHhhh--cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCC
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFR----EQILRWFT--FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDID 142 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~----~~l~~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~ 142 (326)
.+|++|+. ++..+|||||.+.. ......+. +..+.+|++|||||.|.||++|++.|... ..
T Consensus 193 ~s~~lI~~-----~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~--------~~ 259 (636)
T 2ycb_A 193 RSCLYLQT-----PNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHY--------GY 259 (636)
T ss_dssp CCEEEEEC-----SSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHT--------TC
T ss_pred CCEEEEEE-----CCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhc--------CC
Confidence 46999997 78899999998642 11211111 35678999999999999999999999863 23
Q ss_pred CccEEeCHHHHHHHHHhCCcccccccccC--cccc--ccc--cceeeEeccCCCCceEE-CCEEEEEEEeeeCCCceeEE
Q 020397 143 PTPIFLSQFAMESISTKFPYLVQKKLKEG--QEVR--RVA--QLDWKIIEEDCDKPFVA-SGLKFVPLPVMHGEDYVCLG 215 (326)
Q Consensus 143 ~~~iy~~~~~~~~l~~~~~~~~~~~~~~g--~~~~--~~~--~~~~~~i~~~~~~~~~~-~~~~v~~~~~~H~~~~~~~g 215 (326)
+.+||+++.+.+.+...+..........+ ..+. .+. ...++.++. ++.+.+ ++++|+++++.|.. ++++
T Consensus 260 ~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~--g~~~~l~ggi~v~~~~~gH~~--Gs~~ 335 (636)
T 2ycb_A 260 DGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDY--GEVTDIAPDIRLTLHNAGHIL--GSAM 335 (636)
T ss_dssp CSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCT--TCCEEEETTEEEEEEECCSST--TCEE
T ss_pred CCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCC--CCEEEecCCeEEEEeCCCCCC--CcEE
Confidence 68999999988765432210000000000 0000 000 013466777 899999 99999999999987 7899
Q ss_pred EEEcCc-e--eEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCH----HHHHHHHHH---cCCCeEE
Q 020397 216 FLFGEK-C--RVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCF----PQTLEAVKR---LCPKQAL 285 (326)
Q Consensus 216 ~~i~~~-~--~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~----~~a~~~~~~---~~~k~lv 285 (326)
|.++.+ . +++|+||+++.++.+++... ....++|+|++|+||.... ..|.+. ++..+.+++ .+.+.++
T Consensus 336 ~~i~~~~~~~~ilftGD~~~~~~~ll~~~~-~~~~~~D~LI~EsT~~~~~-~~h~s~~~~~~~l~~~i~~~~~~~g~vlI 413 (636)
T 2ycb_A 336 AHLHIGDGQHNMVYTGDFKYEQSRLLEAAA-NRFPRIETLVMESTYGGHE-DVQPSRNRAEKELVKTIYSTLRRGGKILI 413 (636)
T ss_dssp EEEEETTTTTCEEECCSCCSSCCSSSCCCC-CCCSCCSEEEEECTTCSGG-GCCCCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEECCCeEEEEEECCCCCCcccccCCcc-cCCCCCeEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 999865 6 89999999875443332110 0123599999999997532 224333 334444444 3556666
Q ss_pred EEeeccccCc-hhhhHHhHhhhhc-CCCCeEEeecceEE
Q 020397 286 LIGMTHEFDH-HKDNEFLAEWSKR-EGIPVQLSHDGLRI 322 (326)
Q Consensus 286 l~H~~~~~~~-~~~~~~l~~~~~~-~~~~v~~a~Dg~~i 322 (326)
.+|- ..+ ++....+.+..++ ...++.++.|||.+
T Consensus 414 p~fa---~GR~qell~~l~~~~~~~~~~~~~V~~dg~~~ 449 (636)
T 2ycb_A 414 PVFA---VGRAQELMIVLEEYIRTGIIDEVPVYIDGMIW 449 (636)
T ss_dssp ECCT---TTHHHHHHHHHHHHHHTTSSCCCCEEEEHHHH
T ss_pred EECC---CcHHHHHHHHHHHHHHhCCCCCCeEEEehHHH
Confidence 6652 233 2222222222221 11245667788754
No 21
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.87 E-value=1.5e-21 Score=192.45 Aligned_cols=181 Identities=9% Similarity=0.002 Sum_probs=115.7
Q ss_pred cccEEEEEeccCCCCccEEEEecCccHH----HHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCC
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKTFR----EQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDP 143 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~~~----~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~ 143 (326)
+.+|+||+. ++..||||||.+.. ......+..... +|++|||||.|.||++|++.|....... ....
T Consensus 14 ~~n~~LIe~-----~~~~ILID~G~~~~~~~~~~~l~~L~~~~~-~IdaVlLTH~H~DHiGgLp~L~~~~~~g---~~~~ 84 (717)
T 2i7x_A 14 TTVGSVVRF-----DNVTLLIDPGWNPSKVSYEQCIKYWEKVIP-EIDVIILSQPTIECLGAHSLLYYNFTSH---FISR 84 (717)
T ss_dssp SCCCEEEEE-----TTEEEEECCCCCTTTSCHHHHHHHHHTTGG-GCCEEECCCSSHHHHTTHHHHHHHSHHH---HHHT
T ss_pred CCCEEEEEE-----CCeEEEEeCCCCcccchhhhHHHHHHhcCC-CCCEEEECCCChHHHCCHHHHHHhhhhc---ccCC
Confidence 356999997 78899999998741 212122223333 8999999999999999999998531000 0126
Q ss_pred ccEEeCHHHHHHHHHhCCcccccccccCc----cc--cccc--cceeeEeccCCCCceEE----CCEEEEEEEeeeCCCc
Q 020397 144 TPIFLSQFAMESISTKFPYLVQKKLKEGQ----EV--RRVA--QLDWKIIEEDCDKPFVA----SGLKFVPLPVMHGEDY 211 (326)
Q Consensus 144 ~~iy~~~~~~~~l~~~~~~~~~~~~~~g~----~~--~~~~--~~~~~~i~~~~~~~~~~----~~~~v~~~~~~H~~~~ 211 (326)
++||+++.+...++..+...+........ .+ ..+. ...++.++. ++.+.+ ++++|+++++.|.+
T Consensus 85 ~pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~--ge~i~l~~~~ggi~V~~~~aGHs~-- 160 (717)
T 2i7x_A 85 IQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKY--SQLVDLRSRYDGLTLLAYNAGVCP-- 160 (717)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECT--TCCEEETTTTTTEEEEEEECSSST--
T ss_pred ceEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecC--CCEEEEeecCCCEEEEEECCCCCC--
Confidence 89999998876443321100000000000 00 0000 013567777 889999 89999999999998
Q ss_pred eeEEEEEcCc-eeEEEeCCCCCCChhhHH---Hhhc-----CCCCCCcEEEEcCccCCC
Q 020397 212 VCLGFLFGEK-CRVAYISDVSRIPPTTEY---VISK-----SGAGQLDLLILDTLYKDG 261 (326)
Q Consensus 212 ~~~g~~i~~~-~~i~ysgDt~~~~~~~~~---~l~~-----~~~~~~Dlli~e~~~~~~ 261 (326)
++++|+|+.+ .+|+|+||++...+.++. ++.. ....++|+||+|+++...
T Consensus 161 Gs~~~~I~~~~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~ 219 (717)
T 2i7x_A 161 GGSIWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGS 219 (717)
T ss_dssp TCEEEEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCC
T ss_pred CcEEEEEEeCCCEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCC
Confidence 7899999877 899999999764332211 0000 001249999999999753
No 22
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.86 E-value=2.6e-21 Score=189.35 Aligned_cols=233 Identities=14% Similarity=0.062 Sum_probs=138.0
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHH--HHHHhhh--cC-CCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCC
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFRE--QILRWFT--FH-KIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDP 143 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~--~l~~~~~--~~-~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~ 143 (326)
.+|++|+. ++..+|||||.+... .....+. +. .+.+||+|||||.|.||++|++.|... ..+
T Consensus 197 ~s~~LI~~-----~~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~--------~~~ 263 (640)
T 2xr1_A 197 RSCFLLST-----PESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKY--------GYE 263 (640)
T ss_dssp CCEEEEEC-----SSCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHT--------TCC
T ss_pred CcEEEEEE-----CCeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHHhc--------CCC
Confidence 46999997 788999999986321 1111111 24 667899999999999999999999863 235
Q ss_pred ccEEeCHHHHHHHHHhCCcccccccccC--cccc--ccc--cceeeEeccCCCCceEE-CCEEEEEEEeeeCCCceeEEE
Q 020397 144 TPIFLSQFAMESISTKFPYLVQKKLKEG--QEVR--RVA--QLDWKIIEEDCDKPFVA-SGLKFVPLPVMHGEDYVCLGF 216 (326)
Q Consensus 144 ~~iy~~~~~~~~l~~~~~~~~~~~~~~g--~~~~--~~~--~~~~~~i~~~~~~~~~~-~~~~v~~~~~~H~~~~~~~g~ 216 (326)
.+||+++.+.+.+...+..........+ ..+. .+. ...++.++. ++.+.+ ++++|+++++.|.. ++++|
T Consensus 264 ~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~--g~~i~l~gg~~v~~~~~GH~~--Gs~~~ 339 (640)
T 2xr1_A 264 GPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDY--EEVTDIAPDIKLTFHNAGHIL--GSAIS 339 (640)
T ss_dssp SCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCT--TCCEEEETTEEEEEEECSSST--TCEEE
T ss_pred CeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCC--CCEEEecCCEEEEEEcCCCCc--CcEEE
Confidence 7999999987655432210000000000 0000 000 013466777 899999 99999999999987 78899
Q ss_pred EEcCc-e--eEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHH-HHHHHHcC-----CCeEEEE
Q 020397 217 LFGEK-C--RVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQT-LEAVKRLC-----PKQALLI 287 (326)
Q Consensus 217 ~i~~~-~--~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a-~~~~~~~~-----~k~lvl~ 287 (326)
.++.+ . +++|+||+++.++.+++... ....++|+|++|+|+... ...|.+..+. .++.+.+. ..++++.
T Consensus 340 ~i~~~~~~~~ilftGD~~~~~~~ll~~~~-~~~~~~DvLi~EsT~g~~-~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp 417 (640)
T 2xr1_A 340 HFHIGDGLHNVVFTGDYKYEKTRLFDPAV-NKFPRVETVISEATYGNA-NAFQPALKDAEKHLQMVVKNTIERGGIAVIP 417 (640)
T ss_dssp EEEETTTTEEEEECCSCCSSCCSSCCCCC-CBCSCCSEEEEECTTCST-TCCCCCHHHHHHHHHHHC--------CEEEE
T ss_pred EEEECCceEEEEEECCCCCCCcccccccc-ccCCCCcEEEECCCCCCC-ccCCCCHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 99865 6 99999999875433332110 012359999999999752 2235544332 23333332 1344444
Q ss_pred eeccccCc-hhhhHHhHhhhhc-CCCCeEEeecceEE
Q 020397 288 GMTHEFDH-HKDNEFLAEWSKR-EGIPVQLSHDGLRI 322 (326)
Q Consensus 288 H~~~~~~~-~~~~~~l~~~~~~-~~~~v~~a~Dg~~i 322 (326)
.|+ ..+ ++....+.+..++ ...++.+..|||..
T Consensus 418 ~fa--vGR~qell~~l~~~~~~~~~~~~~V~~dg~a~ 452 (640)
T 2xr1_A 418 AFA--VGRSQEVMIVLEESIRKGLIPEVPVYLDGMIW 452 (640)
T ss_dssp CCT--TTHHHHHHHHHHHHHHHTSSCCCCEEEESSHH
T ss_pred ecc--cchHHHHHHHHHHHHHhCCCCCCcEEEEhHHH
Confidence 434 233 2233333322221 11245677788754
No 23
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.86 E-value=2.7e-22 Score=177.97 Aligned_cols=216 Identities=14% Similarity=0.096 Sum_probs=141.1
Q ss_pred cccEEEEEeccCCCCccEEEEecCccHH--HHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKTFR--EQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~~~--~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
..+|++|+. ++..+|||||.+.. .++.+. +.++.+|++||+||.|.||++|++.+... .++++
T Consensus 32 ~g~s~li~~-----~~~~iLiD~G~~~~~~~~l~~~--g~~~~~i~~v~lTH~H~DH~ggl~~~~~~--------~~~~~ 96 (284)
T 2p4z_A 32 HGLSLLLKK-----GNKEIVVDTGQSENFIKNCGLM--GIDVGRIKKVVLTHGHYDHIGGLKGLLER--------NPEVK 96 (284)
T ss_dssp SSCEEEEEE-----TTEEEEECCCSSTHHHHHHHHT--TCCGGGCCEEECCCSCHHHHTTHHHHHHH--------CTTCE
T ss_pred CEEEEEEEE-----CCeEEEEeCCCCHHHHHHHHHc--CCChhhCCEEEECCCCchhhccHHHHHHH--------cCCCc
Confidence 356899997 78899999998754 334443 56777999999999999999999988753 24789
Q ss_pred EEeCHHHHHHHHHhCCcccc-cccccC--ccccccccceeeEeccCCCCceEEC-C-EEEEEEEeeeCCCcee-E--EEE
Q 020397 146 IFLSQFAMESISTKFPYLVQ-KKLKEG--QEVRRVAQLDWKIIEEDCDKPFVAS-G-LKFVPLPVMHGEDYVC-L--GFL 217 (326)
Q Consensus 146 iy~~~~~~~~l~~~~~~~~~-~~~~~g--~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~v~~~~~~H~~~~~~-~--g~~ 217 (326)
||+++.+.+ ..+.+... ...+.+ .........+++.++. .+++. + +.+..+|..|.. .+ . +|+
T Consensus 97 v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~i~~gi~~i~~~~~~h~~--~~~~g~~~~ 167 (284)
T 2p4z_A 97 IYTHKEILN---KKYAMRKGGQFEEIGFDLSFYEKYKNNFVLIDK----DAEIEEGFYVITNTDITYDN--EFTTKNFFV 167 (284)
T ss_dssp EEEEGGGGS---CEEEECSSSCEEECSCCHHHHHHHGGGEEEESS----CEEEETTEEEECSCCCCSCC--HHHHTTEEE
T ss_pred eecCHHHHH---HHhccCccccccccccccchhhhcCceEEEeCC----CeEEeCCEEEEeeeCCcccc--ccCCCceEE
Confidence 999987643 11211100 000000 0000000113344432 34553 4 556677777765 22 2 488
Q ss_pred EcCceeEEEeCCCCCCChhhHHHhhcCCCCCCc--EEEEcCccC-------------C-CC-----CCCCC------CHH
Q 020397 218 FGEKCRVAYISDVSRIPPTTEYVISKSGAGQLD--LLILDTLYK-------------D-GC-----HNTHF------CFP 270 (326)
Q Consensus 218 i~~~~~i~ysgDt~~~~~~~~~~l~~~~~~~~D--lli~e~~~~-------------~-~~-----~~~H~------~~~ 270 (326)
++. +.|++|+ ++++...++++ .| +|+.+|... . .. ...|+ +++
T Consensus 168 ~~~---~~y~~D~--~~de~~~~~~~-----~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~ 237 (284)
T 2p4z_A 168 EKE---GKRIPDK--FLDEVFVVVKE-----EDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVK 237 (284)
T ss_dssp EET---TEEEECC--CTTCCEEEEEE-----TTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHH
T ss_pred EcC---CCEecCC--CCCceEEEEEc-----CCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHH
Confidence 863 6899995 35655557778 89 778787632 1 11 36699 899
Q ss_pred HHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhhcCCCCeEEeecceEEee
Q 020397 271 QTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSKREGIPVQLSHDGLRIPI 324 (326)
Q Consensus 271 ~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~~~~~~v~~a~Dg~~i~l 324 (326)
++++.++++++++++++|+++..+... + .+.+..++.+|+|||+|++
T Consensus 238 ~a~~~~~~~~~~~l~l~H~~~~~~~~~----~---~~~~~~~v~~a~~G~~i~l 284 (284)
T 2p4z_A 238 DIARKIEEYGVKKVLTGHCTGIDEYGF----L---KSVLKDKISYLTTSSSIVV 284 (284)
T ss_dssp HHHHHHHHTTBCCEEECGGGCHHHHHH----H---HHHHGGGEEECCTTCEEEC
T ss_pred HHHHHHHcCCCCEEEeeCcCcHHHHHH----H---HHHhCCCEEEcCCCcEEeC
Confidence 999999999999999999998553222 2 1223447999999999975
No 24
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.84 E-value=5.4e-20 Score=168.21 Aligned_cols=187 Identities=18% Similarity=0.212 Sum_probs=130.5
Q ss_pred CccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCC
Q 020397 82 KHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFP 161 (326)
Q Consensus 82 ~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~ 161 (326)
++..++||+... ..+.+|++|||||.|.||++|++. ..+++||+++.+.+.+...+.
T Consensus 35 pG~~ilVD~f~~-----------~~~~~IdaI~lTH~H~DHiggl~~------------~~~~pIy~s~~t~~ll~~~l~ 91 (367)
T 4b87_A 35 PGTGFTVDAFQY-----------GVVEGCTAYFLTHFHSDHYAGLSK------------HFTFPVYCSEITGNLLKNKLH 91 (367)
T ss_dssp TTSSEEESCCSS-----------SSCTTCCEEECCCCCHHHHTTCST------------TCCSCEEECHHHHHHHHHHSC
T ss_pred CCCeEEEeCCCc-----------CCccCCcEEEECcChHHHhCCccc------------ccCCcEEECHHHHHHHHHHhc
Confidence 677899998532 356799999999999999999972 236789999999987776543
Q ss_pred cccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcC-c-eeEEEeCCCCCCChhhHH
Q 020397 162 YLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGE-K-CRVAYISDVSRIPPTTEY 239 (326)
Q Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~-~-~~i~ysgDt~~~~~~~~~ 239 (326)
.. ...++.++. ++.+.+++++|+++++.|.+ ++++|+|+. + ++++|+||++..++....
T Consensus 92 ~~---------------~~~~~~l~~--g~~~~ig~~~v~~~~agH~~--gs~~~~i~~~~g~~il~tGD~~~~~~~~~~ 152 (367)
T 4b87_A 92 VQ---------------EQYIHPLPL--DTECIVNGVKVVLLDANHCP--GAVMILFYLPNGTVILHTGDFRADPSMERS 152 (367)
T ss_dssp CC---------------GGGEEECCB--TSCEEETTEEEEEEECSSST--TCEEEEEECTTSCEEEECCSCCCCGGGGGS
T ss_pred cc---------------cceEEEeCC--CCEEEECCEEEEEEeCCCcC--CcEEEEEEcCCCcEEEEecCcccCcccchh
Confidence 11 123467777 89999999999999999987 789999975 3 679999999986543322
Q ss_pred HhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHH-----HHHHc--CCCeEEEEeeccccCchhhhHHhHhhhhcCCCC
Q 020397 240 VISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLE-----AVKRL--CPKQALLIGMTHEFDHHKDNEFLAEWSKREGIP 312 (326)
Q Consensus 240 ~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~-----~~~~~--~~k~lvl~H~~~~~~~~~~~~~l~~~~~~~~~~ 312 (326)
.+. ..++|+||+|+||.+ +...|.+.+++.+ +.+.+ +.+.++++--. ...+ .+++.+.+++++.+
T Consensus 153 ~l~---~~~~D~Li~EsTy~~-~~~~~ps~~~~~~~~~~~i~~~~~~~g~~~v~~~a~-~igr---~q~ll~ia~~~g~k 224 (367)
T 4b87_A 153 LLA---DQKVHMLYLDTTYCS-PEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTY-SIGK---EKVFLAIADVLGSK 224 (367)
T ss_dssp GGG---TSCCCEEEECCTTCS-TTCCCCCHHHHHHHHHHHHHHHHHHCTTEEEEEEES-SSCC---HHHHHHHHHHTTCC
T ss_pred hhc---cCCCCEEEEecccCC-CCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEccc-hhHH---HHHHHHHHHHhCCE
Confidence 232 134999999999986 3445677766655 22222 45555443111 1122 34566677777766
Q ss_pred eEEeec
Q 020397 313 VQLSHD 318 (326)
Q Consensus 313 v~~a~D 318 (326)
|.+..+
T Consensus 225 i~v~~~ 230 (367)
T 4b87_A 225 VGMSQE 230 (367)
T ss_dssp EECCHH
T ss_pred EEEeHH
Confidence 665433
No 25
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.76 E-value=1.2e-17 Score=150.84 Aligned_cols=182 Identities=15% Similarity=0.142 Sum_probs=120.3
Q ss_pred ccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCc
Q 020397 83 HSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPY 162 (326)
Q Consensus 83 ~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~ 162 (326)
+..+.||+-..- . ..+|++|||||.|.||++|++.+. +++||+++.+.+.++..+..
T Consensus 9 g~~i~vD~f~~~-----~------~~~i~ai~lTH~H~DHiggl~~l~------------~~pVy~s~~t~~ll~~~l~~ 65 (336)
T 3zdk_A 9 HTPIAVDFWSLR-----R------AGTARLFFLSHMHSDHTVGLSSTW------------ARPLYCSPITAHLLHRHLQV 65 (336)
T ss_dssp TSSEEESCCCHH-----H------HCSSCEEECCCCCGGGSTTCSTTC------------CSCEEECHHHHHHHHHHHCC
T ss_pred CCCEeecCCccc-----C------CCCCCEEEECCChHHHHCchHHHc------------CCCEEecHHHHHHHHHhhhh
Confidence 456888876421 1 258999999999999999998752 47899999999888765432
Q ss_pred ccccccccCccccccccceeeEeccCCC-------CceEECCEEEEEEEeeeCCCceeEEEEEcCc-eeEEEeCCCCCCC
Q 020397 163 LVQKKLKEGQEVRRVAQLDWKIIEEDCD-------KPFVASGLKFVPLPVMHGEDYVCLGFLFGEK-CRVAYISDVSRIP 234 (326)
Q Consensus 163 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~-~~i~ysgDt~~~~ 234 (326)
.- ..++.++. + +.+.+++++|+++++.|.+ ++++|+|+.+ ++++|+||++..+
T Consensus 66 ~~---------------~~~~~~~~--~~~~~i~~~~~~~g~~~v~~~~~~H~~--gs~~~~i~~~~~~i~~tGD~~~~~ 126 (336)
T 3zdk_A 66 SK---------------QWIQALEV--GESHVLPLDEIGQETMTVTLLDANHCP--GSVMFLFEGYFGTILYTGDFRYTP 126 (336)
T ss_dssp CT---------------TTEEECCT--TSEEEEESSSSSSCEEEEEEEECSSST--TCEEEEEEETTEEEEECCSCCCCG
T ss_pred cc---------------cceEecCC--CCeEEecCcccccCCEEEEEEECCCCc--ceEEEEEEeCCceEEEeCCCCCCc
Confidence 10 01122332 3 3344589999999999976 8999999877 8999999998753
Q ss_pred hhhHH-HhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHH----HHHHHcCCCeEEEEeeccccCchhhhHHhHhhhhcC
Q 020397 235 PTTEY-VISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTL----EAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSKRE 309 (326)
Q Consensus 235 ~~~~~-~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~----~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~~~ 309 (326)
+.+.. .+. ...++|+|++|+|+.+. ...+.+-+++. +++++..-+++++.+|+ ..+ .+++.+.++++
T Consensus 127 ~~~~~~~l~--~~~~vD~Li~DsT~~~~-~~~~pse~~v~~~l~~~i~~~~~g~vii~~f~--vgR---~q~i~~~a~~~ 198 (336)
T 3zdk_A 127 SMLKEPALT--LGKQIHTLYLDNTNCNP-ALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYS--LGK---ESLLEQLALEF 198 (336)
T ss_dssp GGGGCGGGS--SCCCCSEEEECCTBCCT-TCCCCCHHHHHHHHHHHHHTCTTSEEEEEECS--SSC---HHHHHHHHHHH
T ss_pred ccccchhhh--ccCCccEEEEecCCCCC-CCCCCCHHHHHHHHHHHHHhCCCCcEEEeecc--hHH---HHHHHHHHHHc
Confidence 32211 110 12449999999999863 22344544443 44444444588888872 233 24455556665
Q ss_pred CCCeE
Q 020397 310 GIPVQ 314 (326)
Q Consensus 310 ~~~v~ 314 (326)
+..|.
T Consensus 199 grkV~ 203 (336)
T 3zdk_A 199 QTWVV 203 (336)
T ss_dssp TCCEE
T ss_pred CCEEE
Confidence 54443
No 26
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.73 E-value=1.4e-16 Score=153.81 Aligned_cols=188 Identities=15% Similarity=0.308 Sum_probs=115.8
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH------------------------HHHHHHhhhcCCCCCccEEEecCCChhhhC
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF------------------------REQILRWFTFHKIPRVDSIILTHEHADAVL 124 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~------------------------~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~ 124 (326)
..|+||+. ++..+|||||.+. ...+...+....+.+||+|||||.|.||++
T Consensus 18 g~~~lI~~-----~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHig 92 (547)
T 2bib_A 18 SDAIILES-----NGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIG 92 (547)
T ss_dssp CCEEEEEE-----TTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHT
T ss_pred ceEEEEEe-----CCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccC
Confidence 34999997 7889999999752 233444444457788999999999999999
Q ss_pred ChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHh---------CCcccccccccCccccccccceee--EeccCCCCce
Q 020397 125 GLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTK---------FPYLVQKKLKEGQEVRRVAQLDWK--IIEEDCDKPF 193 (326)
Q Consensus 125 gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~---------~~~~~~~~~~~g~~~~~~~~~~~~--~i~~~~~~~~ 193 (326)
|++.|+... +..+||+++.....+... +..+.......+ +.+. .+.. ++.+
T Consensus 93 gl~~l~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~~~~~~~--g~~~ 154 (547)
T 2bib_A 93 NVDELLSTY--------PVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETG--------VSVIQNITQG--DAHF 154 (547)
T ss_dssp THHHHHHHS--------CBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTT--------CEEECSCCTT--TTEE
T ss_pred CHHHHHHhC--------CccEEEECcccccccCChHHHHhHHHHHHHHHHHHHHhC--------CeEEEeecCC--CceE
Confidence 999998641 223588776432211000 000000000000 1111 2344 6789
Q ss_pred EECCEEEEEEEe---eeC---------CCceeEEEEEcCc-eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCC
Q 020397 194 VASGLKFVPLPV---MHG---------EDYVCLGFLFGEK-CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKD 260 (326)
Q Consensus 194 ~~~~~~v~~~~~---~H~---------~~~~~~g~~i~~~-~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~ 260 (326)
.+++++|++++. .|. .+..+++|+|+.+ .+++|+||+....+. .+.+.. ...++|+|++.
T Consensus 155 ~~g~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~~~~iLftGD~~~~~~~-e~~l~~-~~~~~DvLkv~----- 227 (547)
T 2bib_A 155 QFGDMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGA-EDKYGP-LIGKVDLMKFN----- 227 (547)
T ss_dssp EETTEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEETTEEEEECTTCCSTTSH-HHHHHH-HHCCCSEEECT-----
T ss_pred ecCCeeEEEecCccccCccccccccCCCCCCcEEEEEEECCEEEEecCCccchhhh-hhhhcc-cccceeEEEec-----
Confidence 999999999873 242 1247899999877 899999999875332 122211 01239999852
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCeEEEEe
Q 020397 261 GCHNTHFCFPQTLEAVKRLCPKQALLIG 288 (326)
Q Consensus 261 ~~~~~H~~~~~a~~~~~~~~~k~lvl~H 288 (326)
|.+-+......+++++++|+.+|++.
T Consensus 228 --HHG~S~~s~s~~fl~~v~P~~aiiS~ 253 (547)
T 2bib_A 228 --HHHDTNKSNTKDFIKNLSPSLIVQTS 253 (547)
T ss_dssp --TTTBCSSSSCHHHHHHHCCSEEEESB
T ss_pred --cccCcccCChHHHHHhcCCcEEEEcC
Confidence 21101122346888899999988864
No 27
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.72 E-value=5.1e-17 Score=141.49 Aligned_cols=164 Identities=21% Similarity=0.204 Sum_probs=106.4
Q ss_pred CceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecCcc------
Q 020397 20 GRSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKT------ 93 (326)
Q Consensus 20 ~~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~------ 93 (326)
+.|||++|++|.- ..+ +.++......+ . ...-..+|+||+. ++..+|||||.+
T Consensus 6 ~~~~~~~l~~g~~-~~~------------~~~~~~~~~~~--~-~~~~~~~~~lI~~-----~~~~iLiDtG~~~~~~~~ 64 (254)
T 3dha_A 6 TVKKLYFIPAGRC-MLD------------HSSVNSALTPG--K-LLNLPVWCYLLET-----EEGPILVDTGMPESAVNN 64 (254)
T ss_dssp CBSEEEEEEEEEE-EEE------------GGGTSTTSCSC--C-EEEEEEEEEEEEE-----TTEEEEECCCCCGGGBTC
T ss_pred CceEEEEecCccE-Eec------------hhhccCCCCCC--c-eEEEeeEEEEEEC-----CCccEEEECCCChhhhcc
Confidence 4589999999941 111 23333332110 0 0012347899997 788999999975
Q ss_pred ----------------------HHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHH
Q 020397 94 ----------------------FREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQF 151 (326)
Q Consensus 94 ----------------------~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~ 151 (326)
+...+.+. +..+.+|++||+||.|.||++|+..|. +.+||+++.
T Consensus 65 ~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~--g~~~~~I~~VilTH~H~DH~gg~~~~~------------~~~i~~~~~ 130 (254)
T 3dha_A 65 EGLFNGTFVEGQILPKMTEEDRIVNILKRV--GYEPDDLLYIISSHLHFDHAGGNGAFT------------NTPIIVQRT 130 (254)
T ss_dssp TTTTTTSTTTTTEEEEBCGGGSHHHHHHHH--TCCGGGCSEEECSCCSHHHHTTGGGCS------------SSCEEEEHH
T ss_pred cccccccccccccccccCchhhHHHHHHHc--CCCHHHCCEEEcCCChhhcCCChHHCC------------CCEEEECHH
Confidence 23334443 566778999999999999999987542 578999998
Q ss_pred HHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCc--eeEEEeCC
Q 020397 152 AMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEK--CRVAYISD 229 (326)
Q Consensus 152 ~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~--~~i~ysgD 229 (326)
..+.+.....+. ... ..+..++..++ ++...++++++...| .|++ ++++|.+... ++++|+||
T Consensus 131 ~~~~~~~~~~~~-~~~--------~~~~~~~~~~~---~~~~~~~~i~~~~~p-GHt~--g~~~~~~~~~~~~~vl~~GD 195 (254)
T 3dha_A 131 EYEAALHREEYM-KEC--------ILPHLNYKIIE---GDYEVVPGVQLLYTP-GHSP--GHQSLFIETEQSGSVLLTID 195 (254)
T ss_dssp HHHHHHHCTTSC-GGG--------SCTTSCEEEEC---SSEEEETTEEEEECC-SSST--TCEEEEEEETTTEEEEEEET
T ss_pred HHHHhhcccccc-ccc--------cCcccceEEec---CCccccCCEEEEECC-CCCC--CCEEEEEEeCCCCEEEEEec
Confidence 887765533222 100 01112333343 466667787666555 4887 6888888753 68999999
Q ss_pred CCCC
Q 020397 230 VSRI 233 (326)
Q Consensus 230 t~~~ 233 (326)
+.+.
T Consensus 196 ~~~~ 199 (254)
T 3dha_A 196 ASYT 199 (254)
T ss_dssp TCSS
T ss_pred ccch
Confidence 9874
No 28
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.70 E-value=5e-17 Score=143.18 Aligned_cols=172 Identities=16% Similarity=0.125 Sum_probs=104.9
Q ss_pred ceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecCccHHH----
Q 020397 21 RSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKTFRE---- 96 (326)
Q Consensus 21 ~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~~~~---- 96 (326)
.|+|++|++|.. ..| |..|......+ .. .....+|+||+. ++..+|||||.+...
T Consensus 3 ~~~i~~l~~G~~-~~~------------~~~~~~~~~~~--~~-~~~~~~~~li~~-----~~~~iLiD~G~~~~~~~~~ 61 (274)
T 3aj3_A 3 DTKVYLLDGGSL-VLD------------GYHVFWNRGPG--GE-VRFPVYSILIEH-----AEGRFLIDTGYDYDHVMKV 61 (274)
T ss_dssp CCEEEEEEEEEE-EEE------------HHHHTTTTCCC--SE-EEEEEEEEEEEE-----TTEEEEECCCCCHHHHHHH
T ss_pred ccEEEEEcCceE-Eec------------hHheecCCCCC--cE-EEeeEEEEEEEe-----CCccEEEECCCCcccccCc
Confidence 589999999963 222 45555442211 10 022358899997 678999999987632
Q ss_pred ------------HHHHhhh--cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCC-
Q 020397 97 ------------QILRWFT--FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFP- 161 (326)
Q Consensus 97 ------------~l~~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~- 161 (326)
.+.+.+. +..+.+|++||+||.|.||++|+..| ...+||+++...+.+.....
T Consensus 62 ~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~------------~~a~v~~~~~~~~~~~~~~~~ 129 (274)
T 3aj3_A 62 LPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYF------------PHAKKICHRSEVPQACNPQPF 129 (274)
T ss_dssp CGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGC------------TTSEEEEETTHHHHHHSCCGG
T ss_pred cccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhC------------CCCEEEECHHHHHHHhCcCCc
Confidence 1222222 55667899999999999999999765 25789999887776643211
Q ss_pred ----cccccccc-------cC--ccccc--cccceeeEeccCCCCceEECC-EEEEEEEeeeCCCceeEEEEEcCc--ee
Q 020397 162 ----YLVQKKLK-------EG--QEVRR--VAQLDWKIIEEDCDKPFVASG-LKFVPLPVMHGEDYVCLGFLFGEK--CR 223 (326)
Q Consensus 162 ----~~~~~~~~-------~g--~~~~~--~~~~~~~~i~~~~~~~~~~~~-~~v~~~~~~H~~~~~~~g~~i~~~--~~ 223 (326)
+. ..... .. ..+.. .+..++..++ +.+++++ +++...| .|++ ++++|.++.+ ++
T Consensus 130 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~g~~~v~~~p-GHt~--g~~~~~~~~~~~~~ 201 (274)
T 3aj3_A 130 EHLGYS-DLSFSAEAAEARGATAQLLEGTTRANSTFEGID----GDVDLARGVKLISTP-GHSI--GHYSLLVEFPRRKP 201 (274)
T ss_dssp GTTTTC-CCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEEC----SSEEEETTEEEEECT-TSST--TCEEEEECCSSSCC
T ss_pred cccccC-hhhhccccccccccccccccccccCCCCceEcC----CccccCCEEEEEECC-CCCc--eeeEEEEECCCCCE
Confidence 11 00000 00 00000 0112334443 2466777 5554444 3988 7899999753 68
Q ss_pred EEEeCCCCCC
Q 020397 224 VAYISDVSRI 233 (326)
Q Consensus 224 i~ysgDt~~~ 233 (326)
++|+||+.+.
T Consensus 202 ~lf~GD~~~~ 211 (274)
T 3aj3_A 202 ILFTIDAAYT 211 (274)
T ss_dssp EEEEETTCSS
T ss_pred EEEEechhhh
Confidence 9999999875
No 29
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.70 E-value=2.2e-17 Score=145.51 Aligned_cols=180 Identities=12% Similarity=0.142 Sum_probs=110.2
Q ss_pred eEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecCccHH------
Q 020397 22 SALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKTFR------ 95 (326)
Q Consensus 22 m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~~~------ 95 (326)
+||++|-+|.-. .|. ..+- ++.+|..|.+.... ........+|++|+. ++..+|||||.+..
T Consensus 3 ~~v~~l~~G~~~-~~~--~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~li~~-----~~~~iLiD~G~~~~~~~~~~ 70 (276)
T 2r2d_A 3 NKLFVLDLGEIR-VDE--NFII-ANSTFVTPQKPTVS---SRLIDIPVSAYLIQC-----TDATVLYDTGCHPECMGTNG 70 (276)
T ss_dssp CEEEEEEEEEEE-EEH--HHHS-TTSSCCCSSSTTCC---CCEEEEEEEEEEEEC-----SSCEEEECCCSCTTCSSTTC
T ss_pred ceEEEEeceEEE-eCH--HHee-cCCCccccccccCC---CceEEeeeEEEEEEC-----CCCCEEEECCCCcccccccc
Confidence 489999998521 221 0000 11124455443211 110012348999996 67899999997653
Q ss_pred ---------------------HHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHH
Q 020397 96 ---------------------EQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAME 154 (326)
Q Consensus 96 ---------------------~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~ 154 (326)
.++.+. +..+.+|++|++||.|.||++|+..| ...+||+++...+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~i~~VilTH~H~DH~gg~~~~------------~~~~v~~~~~~~~ 136 (276)
T 2r2d_A 71 RWPAQSQLNAPYIGASECNLPERLRQL--GLSPDDISTVVLSHLHNDHAGCVEYF------------GKSRLIAHEDEFA 136 (276)
T ss_dssp SSCHHHHHHSCBCCCTTCSHHHHHHHT--TCCGGGCSEEECSCCSTTTSTTGGGC------------SSSEEEEEHHHHH
T ss_pred cccHhHHhhcCCCCChhhCHHHHHHHc--CCCHHHCCEEEecCcccccCCChhhC------------CCCEEEECHHHHH
Confidence 233332 56677999999999999999999765 2578999998877
Q ss_pred HHHHhCCcc-cccccccCccccc--cccceeeEec-cCCCCceEEC-CEEEEEE-EeeeCCCceeEEEEEcCc--eeEEE
Q 020397 155 SISTKFPYL-VQKKLKEGQEVRR--VAQLDWKIIE-EDCDKPFVAS-GLKFVPL-PVMHGEDYVCLGFLFGEK--CRVAY 226 (326)
Q Consensus 155 ~l~~~~~~~-~~~~~~~g~~~~~--~~~~~~~~i~-~~~~~~~~~~-~~~v~~~-~~~H~~~~~~~g~~i~~~--~~i~y 226 (326)
.+....... ........ .+.. .+..++..++ . ++.++++ +++|..+ | .|++ .+++|+++.+ .+++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~v~~~~p-gHt~--g~~~~~~~~~~~~~vl~ 210 (276)
T 2r2d_A 137 TAVRYFATGDHSSPYIVK-DIEAWLATPRNWDLVGRD--ERERELAPGVNLLNFGT-GHAS--GMLGLAVRLEKQPGFLL 210 (276)
T ss_dssp HHHHHHHTTCCSSSSCHH-HHHHHTTSCCCEEEECTT--CCEEEEETTEEEEEEES-SSSS--SEEEEEEECSSSCEEEE
T ss_pred HHhccccccccccccchH-HhhhhccccccceeccCC--CceeEecCCEEEEeCCC-CCCc--eeEEEEEEcCCCceEEE
Confidence 664421100 00000000 0000 0113445665 4 5778876 7888888 6 7987 7899999753 68999
Q ss_pred eCCCCCC
Q 020397 227 ISDVSRI 233 (326)
Q Consensus 227 sgDt~~~ 233 (326)
+||+.+.
T Consensus 211 ~GD~~~~ 217 (276)
T 2r2d_A 211 VSDACYT 217 (276)
T ss_dssp EETTSCC
T ss_pred Eechhhh
Confidence 9999875
No 30
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.70 E-value=6.5e-17 Score=141.29 Aligned_cols=182 Identities=16% Similarity=0.128 Sum_probs=118.3
Q ss_pred cccccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 66 YRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 66 ~r~~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
.|..+|++|+. ++..+|||||.+.... + + +. ..+|++|++||.|.||++|+..+... .+++
T Consensus 17 ~~~~~~~li~~-----~~~~iLiD~G~~~~~~--~-l-~~-~~~i~~vi~TH~H~DH~gg~~~l~~~---------~~~~ 77 (261)
T 3adr_A 17 PEIATVYVMCG-----EKLTVMIDAGVSNSIA--D-F-SF-LDKLDYIVLTHLHIDHIGLLPELLQV---------YKAK 77 (261)
T ss_dssp GGGSEEEEEEC-----SSCEEEECCCCTTCCC--C-C-TT-CSCCCEEECSCCSGGGTTTHHHHHHH---------SCCE
T ss_pred CCceEEEEEEc-----CCcEEEEeCCCCCChh--h-c-CC-CCCCcEEEECCCCccccCCHHHHHHH---------hCCe
Confidence 35567999974 5789999999865311 1 1 34 67999999999999999999998764 1678
Q ss_pred EEeCHHHHHHHHH-------------hCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCc
Q 020397 146 IFLSQFAMESIST-------------KFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDY 211 (326)
Q Consensus 146 iy~~~~~~~~l~~-------------~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~ 211 (326)
||+++...+.+.. .+..+ ... .... ....+..++..+++ ++.+.+++++|++++++ |++
T Consensus 78 i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~~~~--g~~~~~g~~~i~~~~~pGHt~-- 150 (261)
T 3adr_A 78 VLVKSGFKKYLTSEDGLKKLNESAEKVLGDL-YYV-YGGL-EKKLDQDKVIEVEG--NEEFDLGGYRMRLIYTPGHAR-- 150 (261)
T ss_dssp EEEETTCTHHHHSHHHHHHHHHHHHHHHTHH-HHH-HCCC-CSCCCGGGEEEECS--CCEEECSSSEEEEEECTTSCT--
T ss_pred EEECHHHHHHhcCchhHHHHHHHHHHHHHHH-HHH-hccc-ccCCCccceEecCC--CCEEEECCEEEEEEECCCCCC--
Confidence 9998765543321 11100 000 0000 00011123466777 88999999999999998 887
Q ss_pred eeEEEEEcCceeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeecc
Q 020397 212 VCLGFLFGEKCRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLCPKQALLIGMTH 291 (326)
Q Consensus 212 ~~~g~~i~~~~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~ 291 (326)
.+++|.++ +++|+||+... .. . ..+..+.. ....+..+.++++.+.+++++.+++.|...
T Consensus 151 ~~~~~~~~---~~lf~GD~~~~-~~------~------~~~~~~~~----~~~~~~~~~~sl~~l~~l~~~~v~~~H~~~ 210 (261)
T 3adr_A 151 HHMSVLVD---DFLFTGDSAGA-YF------N------GVVIPTTP----PVIDYKMYMESLKRQIELKPKVVGFAHGGL 210 (261)
T ss_dssp TCEEEEET---TEEEEETSSCE-EE------T------TEEECCCC----SCCCHHHHHHHHHHHHHTCCSEEEETTTEE
T ss_pred ccEEEEEC---CEEEEcCcccc-cc------c------ccccCCCC----CCCCHHHHHHHHHHHHcCCCCEEEeCCCCc
Confidence 68888765 79999999763 11 1 12222111 112334455667777788999999998765
Q ss_pred cc
Q 020397 292 EF 293 (326)
Q Consensus 292 ~~ 293 (326)
..
T Consensus 211 ~~ 212 (261)
T 3adr_A 211 VS 212 (261)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 31
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.69 E-value=3.8e-17 Score=139.47 Aligned_cols=160 Identities=18% Similarity=0.285 Sum_probs=102.1
Q ss_pred ceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCCCCCCCCCCCcccccEEEEEeccCCCCccEEEEecCcc-HHHHHH
Q 020397 21 RSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKT-FREQIL 99 (326)
Q Consensus 21 ~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~-~~~~l~ 99 (326)
.|+|+|+|+++..-+|... + .+..+|++|+. ++..+|||||.+ ....+.
T Consensus 12 ~~~~~~~~~~g~~~~p~~~-----------------------~--~~~~n~~li~~-----~~~~iLID~G~~~~~~~l~ 61 (221)
T 1ztc_A 12 HMELKILVTGGNVFVPGRL-----------------------N--AHFSTVVYLEH-----KDRRIIIDPGNLSSMDELE 61 (221)
T ss_dssp CEEEEEEECCBEEEETTTE-----------------------E--CCBCCEEEEEE-----TTEEEEECCCCGGGHHHHH
T ss_pred ceeEEEEEecceEEecCCC-----------------------C--CCceEEEEEEe-----CCeEEEEECCCCcchHHHH
Confidence 5999999999765555421 1 34578999997 778999999974 222232
Q ss_pred Hhhh--cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhCCcccccccccCcccccc
Q 020397 100 RWFT--FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRV 177 (326)
Q Consensus 100 ~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~ 177 (326)
+.+. +..+.+|++||+||.|.||++|+..+. .++||+++.. +...+.. +... .+..+...
T Consensus 62 ~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~~------------~~~v~~~~~~---~~~~~~~-~~~~--~~~~~~~~ 123 (221)
T 1ztc_A 62 EKFSELGISPDDITDVLFTHVHLDHIFNSVLFE------------NATFYVHEVY---KTKNYLS-FGTI--VGRIYSKV 123 (221)
T ss_dssp HHHHHHTCCGGGCCEEECSCCCHHHHGGGGGCT------------TCEEEEEGGG---GGSCGGG-GCHH--HHHHHHHH
T ss_pred HHHHHcCCCHHHCcEEEEcCCccccCCchhhCC------------CCEEEEeHHH---hhhhhhh-hccc--hhhhhhhc
Confidence 2222 566679999999999999999987552 5789998862 1110100 0000 00000000
Q ss_pred c--cceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCc--eeEEEeCCCCCC
Q 020397 178 A--QLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEK--CRVAYISDVSRI 233 (326)
Q Consensus 178 ~--~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~--~~i~ysgDt~~~ 233 (326)
+ ..++..+++ ++.+..+++++...| .|++ ++++|.++.+ ++++|+||+.+.
T Consensus 124 ~~~~~~~~~~~~--g~~l~~~~~~v~~~p-GHt~--g~~~~~~~~~~~~~vlftGD~~~~ 178 (221)
T 1ztc_A 124 ISSWKNVVLLKG--EESLFDEKVKVFHTP-WHAR--EHLSFLLDTENAGRVLITGDITPN 178 (221)
T ss_dssp HHTCCSEEEECS--CCEETTTTEEEEECC-SSST--TCEEEEEEETTTEEEEECGGGSCS
T ss_pred cccccceEEeCC--CCEEECCeEEEEEcC-CCCc--ccEEEEEEcCCCCeEEEEeCcccc
Confidence 0 023456666 666643366666665 5887 7899999765 589999999875
No 32
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.67 E-value=3.6e-16 Score=138.93 Aligned_cols=142 Identities=15% Similarity=0.137 Sum_probs=100.1
Q ss_pred cccEEEEEeccCCCCccEEEEecCcc-HHHHHHHhhh--cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCc
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKT-FREQILRWFT--FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPT 144 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~-~~~~l~~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~ 144 (326)
..+|++|+. ++..+|||||.+ ....+...+. +..+.+|++||+||.|.||++|+..+... .++
T Consensus 54 ~~n~~li~~-----~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~---------~~~ 119 (294)
T 3m8t_A 54 GIAVYVIKT-----SQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKE---------TGA 119 (294)
T ss_dssp SSCCEEEEE-----TTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHH---------HCC
T ss_pred CeEEEEEEE-----CCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhc---------cCC
Confidence 456899986 778999999974 2233333333 44555899999999999999999999763 368
Q ss_pred cEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcCc-e
Q 020397 145 PIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGEK-C 222 (326)
Q Consensus 145 ~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~~-~ 222 (326)
+||+++...+.+.....+..... .. ....+......+.+ ++.+.+++.+|+.++++ |++ ++++|+++.+ .
T Consensus 120 ~v~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~--g~~~~~g~~~i~~~~~pgHt~--g~~~~~~~~~~~ 191 (294)
T 3m8t_A 120 QLVAGERDKPLLEGGYYPGDEKN--ED--LAFPAVKVDRAVKE--GDRVTLGDTTLTAHATPGHSP--GCTSWEMTVKDG 191 (294)
T ss_dssp EEEEEGGGHHHHHHTCBTTBTTC--GG--GCCCCCCCSEEECT--TCEEEETTEEEEEEECCSSST--TCEEEEEEEEET
T ss_pred EEEEChHHHHHHhcccccCcccc--cc--CCCCCCCCceEeCC--CCEEEeCCEEEEEEeCCCCCc--cCEEEEEEccCC
Confidence 99999999887765422111000 00 00001112245677 89999999999999987 877 7899988754 3
Q ss_pred ----eEEEeCCCC
Q 020397 223 ----RVAYISDVS 231 (326)
Q Consensus 223 ----~i~ysgDt~ 231 (326)
+++|+||+.
T Consensus 192 ~~~~~~lf~GD~~ 204 (294)
T 3m8t_A 192 KEDREVLFFCSGT 204 (294)
T ss_dssp TEEEEEEECCCCC
T ss_pred CccceEEEEcCcc
Confidence 799999996
No 33
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.65 E-value=1e-15 Score=134.05 Aligned_cols=142 Identities=13% Similarity=0.090 Sum_probs=99.0
Q ss_pred ccEEEEEeccCCCCccEEEEecCcc-HHHHHHHhhh--cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKT-FREQILRWFT--FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~-~~~~l~~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
.+|++|+. ++..+|||||.+ ....+.+.+. +..+.+|++||+||.|.||++|+..+... .+++
T Consensus 25 ~n~~li~~-----~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~---------~~~~ 90 (263)
T 1k07_A 25 LASYLIVT-----PRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQ---------TKAK 90 (263)
T ss_dssp BCCEEEEE-----TTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHH---------HCCE
T ss_pred eEEEEEEe-----CCceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHh---------cCCE
Confidence 56899986 678999999975 2333333333 44556899999999999999999988753 2689
Q ss_pred EEeCHHHHHHHHHhCCc--ccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcC--
Q 020397 146 IFLSQFAMESISTKFPY--LVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGE-- 220 (326)
Q Consensus 146 iy~~~~~~~~l~~~~~~--~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~-- 220 (326)
||+++...+.+...... .+.... .. .+. +......+.+ ++.+.+++.+|++++++ |++ ++++|.+..
T Consensus 91 v~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~~~~~--g~~~~~g~~~i~~i~~pGHt~--g~~~~~~~~~~ 162 (263)
T 1k07_A 91 YMVMDEDVSVILSGGKSDFHYANDS-ST-YFT--QSTVDKVLHD--GERVELGGTVLTAHLTPGHTR--GCTTWTMKLKD 162 (263)
T ss_dssp EEEEHHHHHHHHTTTTTCTTTTTCG-GG-CCC--CCCCSEEECT--TCEEEETTEEEEEEECCSSST--TCEEEEEEEEE
T ss_pred EEEcHHHHHHHhcccccccccCccc-cc-cCC--CCCcceEeCC--CCEEEECCeEEEEEECCCCCC--CcEEEEEeccc
Confidence 99999988777543211 000000 00 000 1112356777 88999999999999886 887 788998875
Q ss_pred -c--eeEEEeCCCCC
Q 020397 221 -K--CRVAYISDVSR 232 (326)
Q Consensus 221 -~--~~i~ysgDt~~ 232 (326)
+ .+++|+||+..
T Consensus 163 ~~~~~~~lf~GD~~~ 177 (263)
T 1k07_A 163 HGKQYQAVIIGSIGV 177 (263)
T ss_dssp TTEEEEEEEECCCCC
T ss_pred CCceeEEEEECCccc
Confidence 2 37999999865
No 34
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.64 E-value=7.2e-16 Score=130.31 Aligned_cols=141 Identities=15% Similarity=0.080 Sum_probs=93.1
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEe
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFL 148 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~ 148 (326)
.+|++|+.. .++..+|||||.+.. .+.+.+...+. +|++|++||.|.||++|+..+... .+++||+
T Consensus 13 ~n~~li~~~---~~~~~iLiD~G~~~~-~l~~~l~~~g~-~i~~ii~TH~H~DH~gg~~~l~~~---------~~~~v~~ 78 (210)
T 2xf4_A 13 QNCSLIWCE---QTRLAALVDPGGDAE-KIKQEVDASGV-TLMQILLTHGHLDHVGAASELAQH---------YGVPVIG 78 (210)
T ss_dssp EEEEEEECT---TTCEEEEECCCSCHH-HHHHHHHHHTC-EEEEEECSCSCHHHHTTHHHHHHH---------HTCCEEC
T ss_pred cEEEEEEec---CCCcEEEEcCCCCHH-HHHHHHHHcCC-ceeEEEECCCChhhhcCHHHHHHH---------cCCcEEE
Confidence 568999720 156799999997643 33333332233 599999999999999999988753 2578999
Q ss_pred CHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcCceeEEEe
Q 020397 149 SQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGEKCRVAYI 227 (326)
Q Consensus 149 ~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~~~~i~ys 227 (326)
++...+.+.+.+.........+. .. +......+++ ++.+.+++.+|++++++ |++ .+++|.+. +.+++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~--g~~~~~g~~~i~~~~~pgHt~--g~~~~~~~-~~~~lf~ 149 (210)
T 2xf4_A 79 PEKEDEFWLQGLPAQSRMFGLDE--CQ--PLTPDRWLND--GDRVSVGNVTLQVLHCPGHTP--GHVVFFDE-QSQLLIS 149 (210)
T ss_dssp CCGGGHHHHHTHHHHHHHTTCCC--CC--CCCCSBCCCT--TCEEEETTEEEEEEECCSSST--TCEEEEET-TTTEEEE
T ss_pred ecchHHHHhccchhhhhhcCCcc--cC--CCCCceEECC--CCEEEECCeEEEEEECCCCCC--CcEEEEeC-CCCEEEE
Confidence 98776655432111000000000 00 0011245666 88999999999999887 776 78888875 4689999
Q ss_pred CCCCC
Q 020397 228 SDVSR 232 (326)
Q Consensus 228 gDt~~ 232 (326)
||+.+
T Consensus 150 GD~~~ 154 (210)
T 2xf4_A 150 GDVIF 154 (210)
T ss_dssp ETSEE
T ss_pred CCEec
Confidence 99975
No 35
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.64 E-value=1e-14 Score=135.41 Aligned_cols=130 Identities=15% Similarity=0.215 Sum_probs=97.5
Q ss_pred cccEEEEEeccCCCCccEEEEecCccH-HHHHHHhhhc-CCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKTF-REQILRWFTF-HKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~~-~~~l~~~~~~-~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
..+|++|+ ++..+|||||.+. ...+.+.+.. .+..+|++||+||.|.||++|+..+... .+.++
T Consensus 34 ~~n~~li~------~~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~--------~~~~~ 99 (402)
T 1e5d_A 34 TYNAYLVE------DEKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEA--------CQPEK 99 (402)
T ss_dssp EEEEEEEC------SSSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHH--------HCCSE
T ss_pred ceEEEEEE------CCCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHH--------CCCCE
Confidence 35689998 4579999999862 3334433332 3567899999999999999999998764 24689
Q ss_pred EEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee--eCCCceeEEEEEcCcee
Q 020397 146 IFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM--HGEDYVCLGFLFGEKCR 223 (326)
Q Consensus 146 iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~--H~~~~~~~g~~i~~~~~ 223 (326)
||+++...+.+...+.. +....+.+++ ++.+.+++.++++++++ |++ ++++|.+. +.+
T Consensus 100 v~~~~~~~~~~~~~~~~---------------~~~~~~~~~~--g~~~~~g~~~~~~~~~p~gH~~--~~~~~~~~-~~~ 159 (402)
T 1e5d_A 100 IFTSSLGQKAMESHFHY---------------KDWPVQVVKH--GETLSLGKRTVTFYETRMLHWP--DSMVSWFA-DEK 159 (402)
T ss_dssp EEEEHHHHHHHHHHHCC---------------SSCCEEEECT--TCEEECSSCEEEEEECTTSSST--TCEEEEET-TTT
T ss_pred EEEChHHHHHHHHHhCC---------------CCCceEEcCC--CCEEEECCCEEEEEeCCCCCCC--CcEEEEEC-CCC
Confidence 99999988877654321 0123466777 89999999999999997 987 67777763 358
Q ss_pred EEEeCCCC
Q 020397 224 VAYISDVS 231 (326)
Q Consensus 224 i~ysgDt~ 231 (326)
++|+||+.
T Consensus 160 ~l~~GD~~ 167 (402)
T 1e5d_A 160 VLISNDIF 167 (402)
T ss_dssp EEEEETTT
T ss_pred EEEecccc
Confidence 99999994
No 36
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.64 E-value=7.4e-15 Score=136.39 Aligned_cols=131 Identities=17% Similarity=0.202 Sum_probs=97.7
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH-HHHHHHhhhcC----CCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCC
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF-REQILRWFTFH----KIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDP 143 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~-~~~l~~~~~~~----~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~ 143 (326)
.+|++|+. ++..+|||||.+. ...+.+.+... +..+|++|++||.|.||++|+..+... .+.
T Consensus 35 ~n~~li~~-----~~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~--------~p~ 101 (404)
T 2ohh_A 35 YNAYLVCG-----DEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRR--------FPE 101 (404)
T ss_dssp ECCEEEEC-----SSCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHH--------STT
T ss_pred EEEEEEEe-----CCcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHH--------CCC
Confidence 46889985 6679999999862 22233333222 567999999999999999999998864 246
Q ss_pred ccEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee--eCCCceeEEEEEcCc
Q 020397 144 TPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM--HGEDYVCLGFLFGEK 221 (326)
Q Consensus 144 ~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~--H~~~~~~~g~~i~~~ 221 (326)
++||+++...+.++..+.. + .....+.+++ ++.+.+++.+|++++++ |++ .+++|.+..
T Consensus 102 ~~v~~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~--g~~~~~g~~~i~~~~~p~gH~~--~~~~~~~~~- 162 (404)
T 2ohh_A 102 APIYCTEVAVKGLLKHYPS-------L-------REAEFMTVKT--GDVLDLGGKTLTFLETPLLHWP--DSMFTLLDE- 162 (404)
T ss_dssp CCEEECHHHHHHHHHHCGG-------G-------GGSCEEECCT--TCEEECSSCEEEEEECTTSSST--TCEEEEEET-
T ss_pred CEEEECHHHHHHHHHHhcc-------c-------ccCCceEcCC--CCEEEECCEEEEEEeCCCCCCC--CceEEEECC-
Confidence 8999999988877654321 0 0123466777 89999999999999997 987 678887743
Q ss_pred eeEEEeCCCC
Q 020397 222 CRVAYISDVS 231 (326)
Q Consensus 222 ~~i~ysgDt~ 231 (326)
.+++|+||+.
T Consensus 163 ~~~lf~GD~~ 172 (404)
T 2ohh_A 163 DGILFSNDAF 172 (404)
T ss_dssp TTEEECTTTT
T ss_pred CcEEEecCcc
Confidence 5799999985
No 37
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.63 E-value=2.1e-14 Score=133.01 Aligned_cols=129 Identities=12% Similarity=0.156 Sum_probs=96.2
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH-HHHHHHhhhc-CCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF-REQILRWFTF-HKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~-~~~l~~~~~~-~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
.+|++|+ +++.+|||||.+. ...+.+.+.. .+..+|++||+||.|.||++|+..+... .+.++|
T Consensus 36 ~n~~li~------~~~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~--------~~~~~v 101 (398)
T 1ycg_A 36 YNAYLIV------DDKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMEL--------CPDAHV 101 (398)
T ss_dssp ECCEEEC------SSSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHH--------CTTCEE
T ss_pred EEEEEEE------CCCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHH--------CCCCEE
Confidence 4688998 3469999999861 2223332222 4568999999999999999999998864 346899
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee--eCCCceeEEEEEcCceeE
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM--HGEDYVCLGFLFGEKCRV 224 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~--H~~~~~~~g~~i~~~~~i 224 (326)
|+++...+.+...+.. +....+.+++ ++.+.+++.+|++++++ |++ .+++|.+. +.++
T Consensus 102 ~~~~~~~~~l~~~~~~---------------~~~~~~~~~~--g~~~~~g~~~~~~~~~p~gH~~--~~~~~~~~-~~~~ 161 (398)
T 1ycg_A 102 LCTQRAFDSLKAHYSH---------------IDFNYTIVKT--GTSVSLGKRSLTFIEAPMLHWP--DSMFTYVP-EEAL 161 (398)
T ss_dssp EECHHHHHHHHHHTCS---------------CCCEEEECCT--TCEEECSSCEEEEEECTTSSST--TCEEEEET-TTTE
T ss_pred EEcHHHHHHHHHHhCC---------------CCcceEEeCC--CCEEeeCCcEEEEEeCCCCCCC--CcEEEEEC-CCcE
Confidence 9999988877654321 0123456777 89999999999999987 777 67777663 3689
Q ss_pred EEeCCCC
Q 020397 225 AYISDVS 231 (326)
Q Consensus 225 ~ysgDt~ 231 (326)
+|+||+.
T Consensus 162 lf~GD~~ 168 (398)
T 1ycg_A 162 LLPNDAF 168 (398)
T ss_dssp EEEETTT
T ss_pred EEecccc
Confidence 9999994
No 38
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.63 E-value=2.1e-15 Score=130.71 Aligned_cols=124 Identities=18% Similarity=0.205 Sum_probs=92.0
Q ss_pred ccEEEEEeccCCC--CccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDG--KHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~--~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
++|+||... . ++..+|||+|.+....+...+...++ +|++||+||.|.||++|+..|... ...++|
T Consensus 15 ~~~yli~~~---~~~~~~~ilID~g~~~~~~~~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~--------~~~~~v 82 (245)
T 2gcu_A 15 TFTYLLADV---SHPDKPALLIDPVDKTVDRDLKLIDELGL-KLIYAMNTHVHADHVTGTGLLKTK--------LPGVKS 82 (245)
T ss_dssp EEEEEEEET---TSTTCEEEEESCBGGGHHHHHHHHHHHTC-EEEEEECSSCCSSSCBSHHHHHHH--------STTCEE
T ss_pred eEEEEEEcC---CCCCCcEEEEeCCCchHHHHHHHHHHCCC-eeeEEEeCCCChhhhhhHHHHHHh--------CCCCeE
Confidence 668999851 1 25799999998744444444433343 699999999999999999999863 246889
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcCc----
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGEK---- 221 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~~---- 221 (326)
|+++.... .....+.+ |+.+.+++.+|+++.++ |++ .+++|++...
T Consensus 83 ~~~~~~~~-------------------------~~~~~~~~--g~~~~~g~~~i~v~~tpGHt~--g~~~~~~~~~~~~~ 133 (245)
T 2gcu_A 83 VISKASGS-------------------------KADLFLEP--GDKVSIGDIYLEVRATPGHTA--GCVTYVTGEGADQP 133 (245)
T ss_dssp EEEGGGCC-------------------------CCSEEECT--TCEEEETTEEEEEEECCSSST--TCEEEEECCSTTSC
T ss_pred Eecccccc-------------------------cCCEEcCC--CCEEEECCEEEEEEECCCCCC--CCEEEEECCccccc
Confidence 99875420 01135566 88999999999999886 887 7899999764
Q ss_pred -eeEEEeCCCCCC
Q 020397 222 -CRVAYISDVSRI 233 (326)
Q Consensus 222 -~~i~ysgDt~~~ 233 (326)
.+++|+||+...
T Consensus 134 ~~~~lftGD~~~~ 146 (245)
T 2gcu_A 134 QPRMAFTGDAVLI 146 (245)
T ss_dssp SSCEEEEETTSBT
T ss_pred cccEEEECCcccc
Confidence 389999999753
No 39
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.61 E-value=3.8e-15 Score=126.59 Aligned_cols=127 Identities=17% Similarity=0.123 Sum_probs=94.0
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH--HHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF--REQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~--~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
.+|++|+. ++..+|||||.+. ...+.+.+......+|++||+||.|.||++|+..+.+ .+++|
T Consensus 31 ~n~~li~~-----~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~----------~~~~v 95 (219)
T 3l6n_A 31 ANSMYLVT-----KKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNN----------KGIKT 95 (219)
T ss_dssp EEEEEEEE-----TTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHH----------TTCEE
T ss_pred ceEEEEEe-----CCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHh----------CCCEE
Confidence 46888886 7889999999642 2333333322123689999999999999999999874 26899
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEE--eeeCCCceeEEEEEcCceeE
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLP--VMHGEDYVCLGFLFGEKCRV 224 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~--~~H~~~~~~~g~~i~~~~~i 224 (326)
|+++...+.+...-. ......+++ ++.+.+++.+|+.++ ..|++ .+++|.+.. .++
T Consensus 96 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~--g~~~~~g~~~i~~~~~~pgHt~--g~~~~~~~~-~~~ 153 (219)
T 3l6n_A 96 YATAKTNEFLKKDGK-----------------ATSTEIIKT--GKPYRIGGEEFVVDFLGEGHTA--DNVVVWFPK-YNV 153 (219)
T ss_dssp EECHHHHHHHHHTTC-----------------CCCSEECCT--TSEEEETTEEEEEECCCCSSSS--SCCEEEETT-TTE
T ss_pred EEcHHHHHHHHhcCC-----------------CCCcEecCC--CCEEEECCEEEEEEeCCCCCCC--CCEEEEECC-CCE
Confidence 999998877754210 012245667 889999999999987 36887 678888753 479
Q ss_pred EEeCCCCC
Q 020397 225 AYISDVSR 232 (326)
Q Consensus 225 ~ysgDt~~ 232 (326)
+|+||+-.
T Consensus 154 lf~GD~~~ 161 (219)
T 3l6n_A 154 LDGGCLVK 161 (219)
T ss_dssp EEEETTSC
T ss_pred EEECCeee
Confidence 99999875
No 40
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.61 E-value=8.9e-15 Score=128.41 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=96.3
Q ss_pred cccEEEEEeccCCCCccEEEEecCccH-HHHHHHhhh--cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCc
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKTF-REQILRWFT--FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPT 144 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~~-~~~l~~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~ 144 (326)
..+|++|+. ++..+|||||.+. ...+.+.+. +..+.+|++||+||.|.||++|+..|... .++
T Consensus 37 ~~~~~li~~-----~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~---------~~~ 102 (269)
T 1sml_A 37 DLTALLVQT-----PDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRR---------TGA 102 (269)
T ss_dssp TBCCEEEEE-----TTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHH---------SSC
T ss_pred CcEEEEEEe-----CCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHh---------cCC
Confidence 356899997 6789999999752 233333333 44555899999999999999999998763 268
Q ss_pred cEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcC---
Q 020397 145 PIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGE--- 220 (326)
Q Consensus 145 ~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~--- 220 (326)
+||+++...+.+........ ...... ...+....+.+++ ++.+.+++++|++++++ |++ ++++|++..
T Consensus 103 ~v~~~~~~~~~l~~~~~~~~--~~~~~~--~~~~~~~~~~~~~--g~~~~~g~~~i~~~~~pGHt~--g~~~~~~~~~~~ 174 (269)
T 1sml_A 103 KVAANAESAVLLARGGSDDL--HFGDGI--TYPPANADRIVMD--GEVITVGGIVFTAHFMAGHTP--GSTAWTWTDTRN 174 (269)
T ss_dssp EEEECHHHHHHHHTTTCSBT--TTBTSS--CCCCCCCSEECCT--TCEEEETTEEEEEEECCSSST--TCEEEEEEEEET
T ss_pred eEEECHHHHHHHhcCCcccc--cccccc--CCCCCCCCeEeCC--CCEEEECCEEEEEEECCCCCc--ccEEEEEecccC
Confidence 89999998877754321100 000000 0001112245677 88999999999999997 877 788988864
Q ss_pred ce-eEEEeCCCCC
Q 020397 221 KC-RVAYISDVSR 232 (326)
Q Consensus 221 ~~-~i~ysgDt~~ 232 (326)
++ ..++.||+-.
T Consensus 175 ~~~~~l~~gD~l~ 187 (269)
T 1sml_A 175 GKPVRIAYADSLS 187 (269)
T ss_dssp TEEEEEEECCCCC
T ss_pred CceeEEEEecccc
Confidence 22 2444589854
No 41
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.61 E-value=6.1e-16 Score=140.04 Aligned_cols=181 Identities=17% Similarity=0.170 Sum_probs=107.5
Q ss_pred CceEEEEEeecCCCCcCCccccCCCCCCCCcccCCCC------CCCCCCCCCcccccEEEEEeccCCCCccEEEEecCcc
Q 020397 20 GRSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPAL------SIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKT 93 (326)
Q Consensus 20 ~~m~l~~LGtg~s~g~P~~~~~~~~~~~~c~~c~~~~------~~~~~~~~~~r~~ss~li~~~~~~~~~~~iLiD~G~~ 93 (326)
+.|+|++|.+|... +| .+. |..|.+.. +. .+.+......+|+||+. ++..||||+|.+
T Consensus 53 g~~~vt~l~~g~~~-~~--~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~n~~LI~~-----~~~~iLIDtG~~ 116 (331)
T 1p9e_A 53 GDFEITALSDGTVA-LP--VDK-------RLNQPAPKTQSALAKS-FQKAPLETSVTGYLVNT-----GSKLVLVDTGAA 116 (331)
T ss_dssp TTEEEEEEEEEEEE-EC--HHH-------HBSSCHHHHHHHHHHT-TCCSSEEEEEEEEEEEC-----SSCEEEECCCCT
T ss_pred CCEEEEEEeCCCEe-CC--HHH-------cCCCCHHHHHHhhhhc-cCCCceEEEEEEEEEEE-----CCEEEEEECCCC
Confidence 45999999999643 44 333 45554310 00 01110112246999996 778999999987
Q ss_pred ---------HHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEeCHHHHHHHHHhC----
Q 020397 94 ---------FREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTKF---- 160 (326)
Q Consensus 94 ---------~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~~~~~~~~l~~~~---- 160 (326)
+..++.+. +..+.+|++|++||.|.||++|+..+... ...+.+||+++...+.+....
T Consensus 117 ~~~~~~~~~l~~~L~~~--Gi~~~~Id~VilTH~H~DHiggl~~~~~~-------~fp~a~v~~~~~~~~~~~~~~~~~~ 187 (331)
T 1p9e_A 117 GLFGPTLGRLAANLKAA--GYQPEQVDEIYITHMHPDHVGGLMVGEQL-------AFPNAVVRADQKEADFWLSQTNLDK 187 (331)
T ss_dssp TSSCTTCCCHHHHHHHT--TCCGGGCCEEECSCCCHHHHGGGEETTEE-------SSTTCEEECBHHHHHHHSCHHHHTT
T ss_pred CcCCcchhHHHHHHHHc--CCCHHHCCEEEeCCcccccCCcccccccc-------cCCCCEEEECHHHHHHHhCchhhcc
Confidence 44555554 66777999999999999999998743211 034789999998876542210
Q ss_pred -Cc-ccccccccC--cccccc-ccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcCc-eeEEEeCCCCCC
Q 020397 161 -PY-LVQKKLKEG--QEVRRV-AQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGEK-CRVAYISDVSRI 233 (326)
Q Consensus 161 -~~-~~~~~~~~g--~~~~~~-~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~~-~~i~ysgDt~~~ 233 (326)
+. ... ..... ..+... ...+++.+++ ++.+.. + |+.++++ |++ .+++|+++.+ ++++|+||+.+.
T Consensus 188 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--g~~i~~-g--i~vi~tpGHtp--G~~~~~i~~~~~~vlf~GD~~~~ 259 (331)
T 1p9e_A 188 APDDESK-GFFKGAMASLNPYVKAGKFKPFSG--NTDLVP-G--IKALASHGHTP--GHTTYVVESQGQKLALLGDLILV 259 (331)
T ss_dssp CSSTTSC-HHHHHHHHHHHHHHHTTCBCCBCS--SEECST-T--EEEEECTTSST--TCEEEEEEETTEEEEECTTSCCC
T ss_pred Cchhhhh-HHHHHHHHHhhhhcccCceEEeCC--CCEEcc-c--EEEEEcCCCCh--hCEEEEEEECCcEEEEEECccCc
Confidence 00 000 00000 000000 0122344555 444443 4 4455554 887 7899999865 899999999875
No 42
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.60 E-value=6.9e-15 Score=124.04 Aligned_cols=135 Identities=19% Similarity=0.264 Sum_probs=86.5
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEe
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFL 148 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~ 148 (326)
.+|++|+. ++..+|||||.+... +.+.+..... +|++|++||.|.||++|+..+... .+++||+
T Consensus 13 ~n~~li~~-----~~~~iliD~G~~~~~-l~~~l~~~g~-~i~~vilTH~H~DH~gg~~~l~~~---------~~~~v~~ 76 (207)
T 2zwr_A 13 ENAYLVET-----GEGPVLIDPGDEPEK-LLALFQTTGL-IPLAILLTHAHFDHVGAVAPLVEA---------LDLPVYL 76 (207)
T ss_dssp EEEEEEEE-----TTEEEEECCCSCHHH-HHHHHHHHTC-CCSCEECSCCCGGGTTTHHHHHHH---------HCCCEEE
T ss_pred cEEEEEEe-----CCcEEEEeCCCCHHH-HHHHHHHcCC-cccEEEECCCChHHHccHHHHHHH---------hCCcEEE
Confidence 56999996 678999999976532 3333322233 599999999999999999988753 2678999
Q ss_pred CHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCceeEEEeC
Q 020397 149 SQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEKCRVAYIS 228 (326)
Q Consensus 149 ~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~i~ysg 228 (326)
++...+.+....... ..+ +......+ .....+++ ++.+. ++++...|. |++ ++++|.+. +.+++|+|
T Consensus 77 ~~~~~~~~~~~~~~~---~~~-g~~~~~~~-~~~~~~~~--g~~i~--~~~~~~~pG-Ht~--g~~~~~~~-~~~~lf~G 143 (207)
T 2zwr_A 77 HPLDLPLYEGADLAA---RAW-GLAIPKPP-LPVRPLEE--GMRLF--GFQVLHLPG-HSP--GHVAFYDP-EGAQVFSG 143 (207)
T ss_dssp CGGGHHHHHTHHHHH---HHT-TCCCCCCC-SCCEECCT--TCEET--TEEEEECCS-SST--TCEEEEET-TTTEEEEE
T ss_pred CHHHHHHHhCchhhh---hhc-CCCCCcCC-CCceEeCC--CCEEE--EEEEEeCCC-CCC--CcEEEEEC-CCCEEEEe
Confidence 998887665321100 000 00000011 01245566 66554 555544432 887 78888885 45899999
Q ss_pred CCCC
Q 020397 229 DVSR 232 (326)
Q Consensus 229 Dt~~ 232 (326)
|+.+
T Consensus 144 D~~~ 147 (207)
T 2zwr_A 144 DLLF 147 (207)
T ss_dssp TSEE
T ss_pred cccC
Confidence 9965
No 43
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.59 E-value=6.6e-15 Score=131.29 Aligned_cols=139 Identities=17% Similarity=0.216 Sum_probs=94.9
Q ss_pred ccEEEEEeccCCCCccEEEEecCcc-----------HHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCC
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKT-----------FREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSA 137 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~-----------~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~ 137 (326)
+.||+|... .+++.+|||+|.+ ....+.+.+...++ +|++||+||.|.||++|+..|...
T Consensus 17 ~~~yli~~~---~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~----- 87 (298)
T 4efz_A 17 TISYLLFDS---GSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGA-RVRWLLETHVHADHLSAAPYLKTR----- 87 (298)
T ss_dssp BEEEEEECT---TTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTC-EEEEEECSSCCSSSBCCHHHHHHH-----
T ss_pred cEEEEEEEC---CCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCC-cceEEEECCCchhhhhhHHHHHHH-----
Confidence 558888631 2467999999963 33444444433343 599999999999999999999864
Q ss_pred CCCCCCccEEeCHHHHHHHHH---hCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCcee
Q 020397 138 TNDIDPTPIFLSQFAMESIST---KFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVC 213 (326)
Q Consensus 138 ~~~~~~~~iy~~~~~~~~l~~---~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~ 213 (326)
..++||+++...+.+.. .+... ... .. ... .. ...+.+ |+.+.+++++|+++.++ |++ .+
T Consensus 88 ----~~a~i~~~~~~~~~~~~~~~~~~~~--~~~-~~---~~~-~~-~~~~~~--g~~l~~g~~~i~vi~tPGHT~--g~ 151 (298)
T 4efz_A 88 ----VGGEIAIGRHVTRVQDVFGKLFNAG--PAF-AH---DGS-QF-DRLLDD--GDTLALGALSIRAMHTPGHTP--AC 151 (298)
T ss_dssp ----HCCEEEEETTHHHHHHHHHHHTTCC--TTS-CS---SST-TS-SEEECT--TCEEEETTEEEEEEECCSSST--TC
T ss_pred ----hCCcEEEChhHHHHHHHHHHhcCCc--ccc-cc---ccc-CC-CEEeCC--CCEEEECCEEEEEEECCCCCc--cc
Confidence 26789998876554332 11110 000 00 000 11 156777 89999999999999997 887 78
Q ss_pred EEEEEcCc-ee------EEEeCCCCC
Q 020397 214 LGFLFGEK-CR------VAYISDVSR 232 (326)
Q Consensus 214 ~g~~i~~~-~~------i~ysgDt~~ 232 (326)
++|++... ++ ++|+||+-.
T Consensus 152 ~~~~~~~~~~~~~~~~~~lftGD~l~ 177 (298)
T 4efz_A 152 MTYVVTEAHAAHDARDAAAFVGDTLF 177 (298)
T ss_dssp EEEEEEETTCCGGGCBCEEECCSSBC
T ss_pred EEEEECCCcccccCCceEEEEcCccc
Confidence 99999764 44 999999954
No 44
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.57 E-value=2.5e-14 Score=127.46 Aligned_cols=189 Identities=16% Similarity=0.173 Sum_probs=118.6
Q ss_pred cccEEEEEeccCCCCccEEEEecCcc-HHHHHHHhhh--cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCc
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKT-FREQILRWFT--FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPT 144 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~-~~~~l~~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~ 144 (326)
+.+|++|+. ++..+|||+|.+ ....+.+.+. +..+.+|++||+||.|.||++|+..+... .++
T Consensus 57 ~~~~~li~~-----~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~---------~~~ 122 (303)
T 4ax1_B 57 GISALLVTS-----DAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKA---------TGA 122 (303)
T ss_dssp SSCCEEECC-----TTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHH---------HCC
T ss_pred CceEEEEEe-----CCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhh---------cCC
Confidence 467899996 778999999963 2233333333 44555799999999999999999998763 268
Q ss_pred cEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcCc--
Q 020397 145 PIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGEK-- 221 (326)
Q Consensus 145 ~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~~-- 221 (326)
+||+++...+.+...........+.... ...+....+.+++ ++.+.+++.+|+.++++ |++ .+++|.+...
T Consensus 123 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--g~~~~~g~~~v~~~~~pgHt~--g~~~~~~~~~~~ 196 (303)
T 4ax1_B 123 PVYARAPAIDTLKRGLPDRTDPNFEVAE--PVAPVANIVTLAD--DGVVSVGPLALTAVASPGHTP--GGTSWTWRSCEG 196 (303)
T ss_dssp CEEEEHHHHHHHHHTSCCTTSTTGGGCC--CCCCCSCEEEECT--TCEEEETTEEEEEEECCSSST--TCEEEEEEEEET
T ss_pred EEEEcHHHHHHHhccccCcccccccccc--CcCCCCCcEEeCC--CCEEEECCeEEEEEeCCCCCc--cceEEEEEecCC
Confidence 9999999988876643111000000000 0011123467777 89999999999999876 777 7788888652
Q ss_pred --eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEc--CccCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeecccc
Q 020397 222 --CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILD--TLYKDGCHNTHFCFPQTLEAVKRLCPKQALLIGMTHEF 293 (326)
Q Consensus 222 --~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e--~~~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~ 293 (326)
...+++||+-... + ...+... ..+. ..-..+.++++.+..+.++.+++.|.....
T Consensus 197 ~~~~~~l~gD~l~~~--------~-----~~~~~~~~~~~~~----~~~~~~~~sl~~l~~l~~~~vv~~Hg~~~~ 255 (303)
T 4ax1_B 197 DDCRQMVYADSLTAI--------S-----DDVFRYSDDAAHP----GYLAAFRNTLARVAALDCDILVTPHPSASG 255 (303)
T ss_dssp TEEEEEEECCCCCCC--------C-----CSSCCTTCGGGST----THHHHHHHHHHHHHTSCCSEEECSSGGGGT
T ss_pred CceeEEEEeCCcccc--------C-----cCcccCCCCCCCc----cHHHHHHHHHHHHhcCCCCEEEcCCcchhh
Confidence 2245559986521 1 1110000 0000 001233455666777888999998876543
No 45
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.57 E-value=1.7e-14 Score=126.25 Aligned_cols=128 Identities=15% Similarity=0.155 Sum_probs=93.6
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH-HHHHHHhhh-cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF-REQILRWFT-FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~-~~~l~~~~~-~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
.+|++|+ +++.+|||||.+. ...+.+.+. ..+..+|++|++||.|.||++|+..+.+. .+.++|
T Consensus 43 ~N~yli~------~~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~--------~~~~~v 108 (262)
T 3hnn_A 43 SNSYVIE------GDKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLEL--------APQITF 108 (262)
T ss_dssp EEEEEEE------SSSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHH--------CTTCEE
T ss_pred EEEEEEE------CCCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHH--------CCCCEE
Confidence 3589998 4679999999753 233333222 23567899999999999999999999864 347999
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEEC-CEEEEEEEee--eCCCceeEEEEEcCcee
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVAS-GLKFVPLPVM--HGEDYVCLGFLFGEKCR 223 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~-~~~v~~~~~~--H~~~~~~~g~~i~~~~~ 223 (326)
|+++...+.+...+... ....+.+++ |+.+.++ +.+++.++++ |++ .++.+.+. +.+
T Consensus 109 ~~~~~~~~~l~~~~~~~---------------~~~~~~~~~--g~~l~lg~~~~~~~i~tpg~Ht~--g~~~~~~~-~~~ 168 (262)
T 3hnn_A 109 VCSLPAAGDLRAAFPDD---------------NLNILPMRG--KETLDLGKGHVLKFLPIPSPRWP--AGLCTYDV-QTQ 168 (262)
T ss_dssp EECHHHHHHHHHHSSSS---------------CCEEEECCS--SCEEECSTTCEEEEEECCCSSCT--TCEEEEET-TTT
T ss_pred EECHHHHHHHHHHhCCC---------------CCceEEeCC--CCEEEcCCCcEEEEEECCCCCCC--CeeEEEeC-CCC
Confidence 99999888776643210 123466777 8999998 8888888776 666 56666553 257
Q ss_pred EEEeCCC
Q 020397 224 VAYISDV 230 (326)
Q Consensus 224 i~ysgDt 230 (326)
++|+||+
T Consensus 169 ~lfsGD~ 175 (262)
T 3hnn_A 169 ILYTDKI 175 (262)
T ss_dssp EEEEETT
T ss_pred EEEEeec
Confidence 9999999
No 46
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.55 E-value=3.5e-14 Score=123.85 Aligned_cols=118 Identities=17% Similarity=0.260 Sum_probs=85.8
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEe
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFL 148 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~ 148 (326)
++|++|.. .++..+|||+|.+ ..+.+.+...++ +|++|++||.|.||++|+..|... ....+||+
T Consensus 19 n~~yli~~----~~~~~vlID~G~~--~~i~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~--------~~~~~v~~ 83 (258)
T 2qed_A 19 NYIWVLTN----DEGRCVIVDPGEA--APVLKAIAEHKW-MPEAIFLTHHHHDHVGGVKELLQH--------FPQMTVYG 83 (258)
T ss_dssp EEEEEEEC----TTSEEEEECCSCH--HHHHHHHHHHTC-EEEEEECCSCCHHHHTTHHHHHHH--------CTTCEEEE
T ss_pred eEEEEEEE----CCCcEEEEeCCCc--HHHHHHHHHcCC-CCCEEEeCCCCccccCCHHHHHHH--------CCCCEEEe
Confidence 56899983 1467999999974 223333322344 899999999999999999998864 23489999
Q ss_pred CHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcCceeEEEe
Q 020397 149 SQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGEKCRVAYI 227 (326)
Q Consensus 149 ~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~~~~i~ys 227 (326)
++... + ++ ....+.+ |+.+.+++.+++.++++ |++ ++++|. +.+++|+
T Consensus 84 ~~~~~------~---------~~---------~~~~~~~--g~~~~~g~~~~~vi~tPGHt~--g~~~~~---~~~~lft 132 (258)
T 2qed_A 84 PAETQ------D---------KG---------ATHLVGD--GDTIRVLGEKFTLFATPGHTL--GHVCYF---SRPYLFC 132 (258)
T ss_dssp CGGGG------G---------GT---------CSEECCT--TCEEEETTEEEEEEECCSSST--TCEEEE---ETTEEEE
T ss_pred ccccc------C---------CC---------CcEEeCC--CCEEEECCcEEEEEECCCCCC--CCeEEE---cCCEEEE
Confidence 97541 0 00 1145666 88999999999999886 887 678887 3479999
Q ss_pred CCCCC
Q 020397 228 SDVSR 232 (326)
Q Consensus 228 gDt~~ 232 (326)
||+..
T Consensus 133 GD~l~ 137 (258)
T 2qed_A 133 GDTLF 137 (258)
T ss_dssp ETTEE
T ss_pred CCCCC
Confidence 99953
No 47
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.55 E-value=4.5e-15 Score=140.79 Aligned_cols=127 Identities=16% Similarity=0.192 Sum_probs=91.9
Q ss_pred ccEEEE--EeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLI--DHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li--~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
++||+| +. +++.+|||+|.+... +...+...+. +|++||+||.|.||++|+..|... .+++|
T Consensus 16 ~n~yli~~~~-----~~~~ilID~g~~~~~-~~~~l~~~~~-~i~~Il~TH~H~DH~gg~~~l~~~---------~~~~i 79 (474)
T 3tp9_A 16 HASYLVGCQE-----TGEACVIDPARDVEP-YLLTAKREGL-RIVAALETHIHADFVSGAREMADR---------AGAAI 79 (474)
T ss_dssp EEEEEEEETT-----TCEEEEESCCSCCHH-HHHHHHHHTC-EEEEEECSSCCSSSCCCHHHHHHH---------HCCEE
T ss_pred eEEEEEEECC-----CCEEEEEcCCCChHH-HHHHHHHcCC-eeEEEEcCcCchhhhCCHHHHHHH---------HCCcE
Confidence 568888 43 778999999977543 3333332333 799999999999999999999864 26788
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcCc-e--
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGEK-C-- 222 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~~-~-- 222 (326)
|+++.....+ ...+ .+....+.+.+ ++.+.+++++|+++.++ |++ .+++|++... .
T Consensus 80 ~~~~~~~~~~----~~~~------------~~~~~~~~~~~--g~~~~~g~~~i~~i~tPGHt~--g~~~~~~~~~~~~~ 139 (474)
T 3tp9_A 80 CVSDEGPPEW----KSEY------------VKAYPHRLLKD--GDELHFGNVRIVVMHTPGHTP--EHVSYLLYDGKTSP 139 (474)
T ss_dssp EEECCSCGGG----CCGG------------GGGSSEEEECT--TCEEEETTEEEEEEECCSSSS--SCEEEEEEETTTEE
T ss_pred EEcCcchhhh----cccc------------cccccceECCC--CCEEEECCEEEEEEECCCCCC--CCEEEEEecCCCCC
Confidence 8887543211 1100 11122356777 89999999999999997 887 7899998765 4
Q ss_pred ---eEEEeCCCC
Q 020397 223 ---RVAYISDVS 231 (326)
Q Consensus 223 ---~i~ysgDt~ 231 (326)
+++|+||+-
T Consensus 140 ~~~~~lftGD~l 151 (474)
T 3tp9_A 140 DVPMALFSGDFV 151 (474)
T ss_dssp EEEEEEEEETSE
T ss_pred CCceEEEeCCcc
Confidence 799999995
No 48
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.54 E-value=4.2e-13 Score=125.01 Aligned_cols=129 Identities=16% Similarity=0.198 Sum_probs=93.8
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH-HHHHHHhhh-cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF-REQILRWFT-FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~-~~~l~~~~~-~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
.+|++|+ ++..+|||||... ...+.+.+. ..+..+|++|++||.|.||++|+..+... .+.++|
T Consensus 41 ~n~~li~------~~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~--------~~~~~v 106 (414)
T 2q9u_A 41 YNSYFID------DECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHK--------FTNATF 106 (414)
T ss_dssp ECCEEEC------SSSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGG--------STTCEE
T ss_pred eeEEEEE------CCCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHH--------CCCCEE
Confidence 4688998 4578999999852 223333222 23557899999999999999999998754 247899
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee--eCCCceeEEEEEcCceeE
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM--HGEDYVCLGFLFGEKCRV 224 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~--H~~~~~~~g~~i~~~~~i 224 (326)
|+++...+.+...+.. + ......+++ ++.+.+++.+++.++++ |++ .++.+.+. +.++
T Consensus 107 ~~~~~~~~~~~~~~~~-------~--------~~~~~~~~~--g~~~~lg~~~~~~~~~p~gHt~--~~~~~~~~-~~~~ 166 (414)
T 2q9u_A 107 VCTKKCQEHLKILYGM-------E--------KATWLIVDD--KYTLKIGKRTLKFIPVPLLHWP--DSTFTYCP-EDKI 166 (414)
T ss_dssp EECHHHHHHHHHHHCC-------T--------TCCEEECCT--TCCEECSSCEEEEEECTTSSST--TCEEEEET-TTTE
T ss_pred EECHHHHHHHHHHhCC-------C--------CCeeEEeCC--CCEEEECCeEEEEEeCCCCCCC--CceEEEEC-CCeE
Confidence 9999988777653321 0 023356777 89999999999999887 877 56665553 3589
Q ss_pred EEeCCCC
Q 020397 225 AYISDVS 231 (326)
Q Consensus 225 ~ysgDt~ 231 (326)
+|+||..
T Consensus 167 lf~GD~~ 173 (414)
T 2q9u_A 167 LFSNDGF 173 (414)
T ss_dssp EEEETTT
T ss_pred EEEcccc
Confidence 9999974
No 49
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.54 E-value=4.1e-14 Score=123.53 Aligned_cols=120 Identities=12% Similarity=0.122 Sum_probs=85.9
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEe
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFL 148 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~ 148 (326)
+.||+|... .++..+|||+|.+ ..+...+...++ +|++|++||.|.||++|+..|... ...++||+
T Consensus 12 n~~yli~~~---~~~~~vlID~G~~--~~i~~~l~~~g~-~i~~IllTH~H~DH~gg~~~l~~~--------~~~~~v~~ 77 (260)
T 1qh5_A 12 NYMYLVIDD---ETKEAAIVDPVQP--QKVVDAARKHGV-KLTTVLTTHHHWDHAGGNEKLVKL--------ESGLKVYG 77 (260)
T ss_dssp EEEEEEEET---TTTEEEEESCSSH--HHHHHHHHHHTC-EEEEEECCCSSHHHHTTHHHHHHH--------STTCEEEE
T ss_pred eEEEEEEEC---CCCEEEEEcCCCH--HHHHHHHHHcCC-CccEEEeCCCCccccCCHHHHHHH--------CCCCEEEE
Confidence 558888851 1367999999953 223333332343 699999999999999999998864 23588999
Q ss_pred CHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEE-cC---cee
Q 020397 149 SQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLF-GE---KCR 223 (326)
Q Consensus 149 ~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i-~~---~~~ 223 (326)
++.. ++ + ....+.+ |+.+.+++.+++.++++ |++ ++++|.+ +. +.+
T Consensus 78 ~~~~-------~~---------~---------~~~~~~~--g~~~~~g~~~~~vi~tPGHt~--g~~~~~~~~~~~~~~~ 128 (260)
T 1qh5_A 78 GDDR-------IG---------A---------LTHKITH--LSTLQVGSLNVKCLATPCHTS--GHICYFVSKPGGSEPP 128 (260)
T ss_dssp SCTT-------ST---------T---------CSEECCT--TCEEEETTEEEEEEECCSSST--TCEEEEEECSSSSSCC
T ss_pred Cccc-------CC---------C---------CCEEeCC--CCEEEECCEEEEEEECCCCCC--CCEEEEEeccCCCCCC
Confidence 8531 10 0 1134566 88999999999998886 877 7889988 43 268
Q ss_pred EEEeCCCC
Q 020397 224 VAYISDVS 231 (326)
Q Consensus 224 i~ysgDt~ 231 (326)
++|+||+-
T Consensus 129 ~lftGD~l 136 (260)
T 1qh5_A 129 AVFTGDTL 136 (260)
T ss_dssp EEEEETTE
T ss_pred EEEEcCcc
Confidence 99999994
No 50
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.53 E-value=3.5e-14 Score=126.80 Aligned_cols=142 Identities=13% Similarity=0.093 Sum_probs=94.3
Q ss_pred ccEEEEE-eccCCCCccEEEEecCccH-HHHHHHhhhc-C-CCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCc
Q 020397 69 NTSLLID-HCEGDGKHSYILIDVGKTF-REQILRWFTF-H-KIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPT 144 (326)
Q Consensus 69 ~ss~li~-~~~~~~~~~~iLiD~G~~~-~~~l~~~~~~-~-~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~ 144 (326)
.+|++|+ . ++..+|||+|.+. ...+.+.+.. . ...+|++|++||.|.||++|+..+... .+.+
T Consensus 24 ~n~~li~~~-----~~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~--------~~~a 90 (303)
T 2vw8_A 24 VPVFLLRLG-----EASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPR--------LPNV 90 (303)
T ss_dssp SCEEEEEEE-----TTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGG--------CTTC
T ss_pred ceEEEEEeC-----CCceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHh--------CCCC
Confidence 4589993 4 7789999999853 2222222221 2 557899999999999999999988753 3478
Q ss_pred cEEeCHHHHHHHHHh--------C----CcccccccccCccccccccceeeEeccCCCCceEECC-EEEEEEEee-eCCC
Q 020397 145 PIFLSQFAMESISTK--------F----PYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASG-LKFVPLPVM-HGED 210 (326)
Q Consensus 145 ~iy~~~~~~~~l~~~--------~----~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~-~~v~~~~~~-H~~~ 210 (326)
+||+++...+.+... + ...+...... .......+..+++ |+.+.+++ .++++++++ |++
T Consensus 91 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--g~~~~lg~g~~l~~i~~pGHt~- 163 (303)
T 2vw8_A 91 QVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEA----CAWDALPVRAVAD--GEWLELGPRHRLQVIEAHGHSD- 163 (303)
T ss_dssp EEEEEHHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCC----CCGGGSCEEEECT--TCEEEEETTEEEEEEECTTSST-
T ss_pred eEEECHHHHHHHhccchhhHHHHHHHHHHHhhcccccc----cCCCCCCceEcCC--CCEEecCCCeEEEEEECCCCCc-
Confidence 999999876544211 0 0000000000 0011133466777 88999987 899888885 887
Q ss_pred ceeEEEEEcCceeEEEeCCCCC
Q 020397 211 YVCLGFLFGEKCRVAYISDVSR 232 (326)
Q Consensus 211 ~~~~g~~i~~~~~i~ysgDt~~ 232 (326)
.+++|.+.. .+++|+||+-.
T Consensus 164 -g~~~~~~~~-~~~lf~GD~~~ 183 (303)
T 2vw8_A 164 -DHVVFYDVR-RRRLFCGDALG 183 (303)
T ss_dssp -TCEEEEETT-TTEEEEETTTC
T ss_pred -ccEEEEECC-CCEEEEcCccC
Confidence 788888853 58999999953
No 51
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.53 E-value=5.6e-14 Score=119.82 Aligned_cols=126 Identities=13% Similarity=0.052 Sum_probs=92.1
Q ss_pred ccEEEEEeccCCCCccEEEEecCcc--HHHHHHHhhhcC-CCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKT--FREQILRWFTFH-KIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~--~~~~l~~~~~~~-~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
.+|++|+. ++..+|||||.+ ....+.+.+... + .+|++||+||.|.||++|+..+.. ..++
T Consensus 27 ~n~~li~~-----~~~~iLiD~G~~~~~~~~~~~~l~~~~g-~~i~~vi~TH~H~DH~gg~~~~~~----------~~~~ 90 (223)
T 1m2x_A 27 ANAVYLVT-----DKGVVVIDCPWGEDKFKSFTDEIYKKHG-KKVIMNIATHSHDDRAGGLEYFGK----------IGAK 90 (223)
T ss_dssp EEEEEEEE-----TTEEEEESCCSSGGGHHHHHHHHHHHHC-CCEEEEECSSSSTTTTTTHHHHHH----------TTCE
T ss_pred ccEEEEEe-----CCEEEEEeCCCChhHHHHHHHHHHHHhC-CCeEEEEeccCCccccCchhhHhh----------CCCe
Confidence 56899986 778999999974 223333333222 3 589999999999999999998874 2679
Q ss_pred EEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEE-e-eeCCCceeEEEEEcCcee
Q 020397 146 IFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLP-V-MHGEDYVCLGFLFGEKCR 223 (326)
Q Consensus 146 iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~-~-~H~~~~~~~g~~i~~~~~ 223 (326)
||+++...+.+...... . ....+.+ ++.+.+++.+|+++. + .|++ .+++|.+.. .+
T Consensus 91 v~~~~~~~~~~~~~~~~--------------~---~~~~~~~--g~~~~~g~~~i~~~~~~pgHt~--~~~~~~~~~-~~ 148 (223)
T 1m2x_A 91 TYSTKMTDSILAKENKP--------------R---AQYTFDN--NKSFKVGKSEFQVYYPGKGHTA--DNVVVWFPK-EK 148 (223)
T ss_dssp EEEEHHHHHHHHHTTCC--------------C---CSEEESS--CEEEEETTEEEEEECCCSSSSS--SCCEEEETT-TT
T ss_pred EEEcHHHHHHHHhcCcc--------------C---CceecCC--CceEEECCEEEEEEecCCCCCC--CCEEEEECC-CC
Confidence 99999888766542100 0 1145666 788999999999984 5 5887 788888753 57
Q ss_pred EEEeCCCCC
Q 020397 224 VAYISDVSR 232 (326)
Q Consensus 224 i~ysgDt~~ 232 (326)
++|+||+..
T Consensus 149 ~lf~GD~~~ 157 (223)
T 1m2x_A 149 VLVGGCIIK 157 (223)
T ss_dssp EEEEETTSC
T ss_pred EEEEecccc
Confidence 999999754
No 52
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.53 E-value=4.5e-14 Score=121.19 Aligned_cols=168 Identities=13% Similarity=0.151 Sum_probs=111.3
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH--HHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF--REQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~--~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
.+|++|+. ++..+|||+|.+. ...+.+.+......+|++|++||.|.||++|+..+.. .+++|
T Consensus 37 ~n~~li~~-----~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~----------~~~~v 101 (232)
T 1a7t_A 37 SNGMIVIN-----NHQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQR----------KGVQS 101 (232)
T ss_dssp EEEEEEEE-----TTEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHH----------TTCEE
T ss_pred ceEEEEEe-----CCEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHh----------CCCeE
Confidence 56899986 7789999999752 2334433322224689999999999999999998874 26799
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEE-e-eeCCCceeEEEEEcCceeE
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLP-V-MHGEDYVCLGFLFGEKCRV 224 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~-~-~H~~~~~~~g~~i~~~~~i 224 (326)
|+++...+.+... .. + .....+++ ++.+.+++.+++.+. + .|++ .+++|.+.. .++
T Consensus 102 ~~~~~~~~~~~~~-~~-------~---------~~~~~~~~--g~~~~~g~~~i~~~~~~pgHt~--g~~~~~~~~-~~~ 159 (232)
T 1a7t_A 102 YANQMTIDLAKEK-GL-------P---------VPEHGFTD--SLTVSLDGMPLQCYYLGGGHAT--DNIVVWLPT-ENI 159 (232)
T ss_dssp EEEHHHHHHHHHH-TC-------C---------CCSEEESS--EEEEEETTEEEEEECCCCSSST--TCCEEEETT-TTE
T ss_pred EEcHHHHHHHHhc-CC-------C---------CCceecCC--CCEEEECCeEEEEEeCCCCCCC--CCEEEEECC-CCE
Confidence 9999887766542 00 0 01244566 788899999999985 5 5887 778888753 479
Q ss_pred EEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHc--CCCeEEEEeeccc
Q 020397 225 AYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRL--CPKQALLIGMTHE 292 (326)
Q Consensus 225 ~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~--~~k~lvl~H~~~~ 292 (326)
+|+||+..... ... +..+ . ......+.++++-+.++ .++.+++.|-...
T Consensus 160 lf~GD~~~~~~-----~~~-----~~~~------~---~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~ 210 (232)
T 1a7t_A 160 LFGGCMLKDNQ-----TTS-----IGNI------S---DADVTAWPKTLDKVKAKFPSARYVVPGHGNYG 210 (232)
T ss_dssp EEEETTSCCTT-----CCS-----CCCC------T---TCCTTTHHHHHHHHHHHCTTCSEEEESSSCCB
T ss_pred EEEcCcccccC-----Ccc-----cccC------C---CCCHHHHHHHHHHHHhhCCCCCEEECCCCCcc
Confidence 99999976310 011 1100 0 01123455555555555 6788888875443
No 53
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.52 E-value=1.7e-14 Score=124.64 Aligned_cols=135 Identities=16% Similarity=0.163 Sum_probs=91.9
Q ss_pred cccEEEEEeccCCCCccEEEEecCcc--HHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKT--FREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~--~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
..+|++|+. ++..+|||||.+ ....+.+.+......+|++||+||.|.||++|+..+... +++
T Consensus 47 ~~n~~li~~-----~~~~iLID~G~~~~~~~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~----------~~~ 111 (243)
T 4hl2_A 47 ASNGLIVRD-----GGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA----------GIA 111 (243)
T ss_dssp EEEEEEEEE-----TTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT----------TCE
T ss_pred cceEEEEEE-----CCcEEEEECCCCCccHHHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhC----------CCe
Confidence 357899986 778999999953 334444444332123799999999999999999998752 689
Q ss_pred EEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEe-eeCCCceeEEEEEcCceeE
Q 020397 146 IFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPV-MHGEDYVCLGFLFGEKCRV 224 (326)
Q Consensus 146 iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~-~H~~~~~~~g~~i~~~~~i 224 (326)
||+++...+.+......... .. ........+.+ ++.+.+++++| .+.+ .|++ .+++|.+.. .++
T Consensus 112 v~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~--g~~~~~g~~~v-~~~~pGHt~--g~~~~~~~~-~~~ 176 (243)
T 4hl2_A 112 TYANALSNQLAPQEGMVAAQ-HS--------LTFAANGWVEP--ATAPNFGPLKV-FYPGPGHTS--DNITVGIDG-TDI 176 (243)
T ss_dssp EEEEHHHHHHGGGTTCCCCS-EE--------ECBCTTSBBCG--GGSTTCTTEEE-ECCCSSSST--TCCEEEETT-TTE
T ss_pred EEECHHHHHHHhcccccccc-cc--------cccccceEecC--CCeEEECCEEE-EeCCCCCCc--CCEEEEEcC-CCE
Confidence 99999887766442111100 00 00001133555 78888999998 4444 4887 788888853 479
Q ss_pred EEeCCCCC
Q 020397 225 AYISDVSR 232 (326)
Q Consensus 225 ~ysgDt~~ 232 (326)
+|+||+-.
T Consensus 177 lf~GD~~~ 184 (243)
T 4hl2_A 177 AFGGCLIK 184 (243)
T ss_dssp EECTTTCC
T ss_pred EEEcceee
Confidence 99999876
No 54
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.52 E-value=6.5e-14 Score=125.75 Aligned_cols=146 Identities=14% Similarity=0.093 Sum_probs=96.3
Q ss_pred ccccEEEEEeccCCCCccEEEEecCccHH---HHHHHhhh--cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCC
Q 020397 67 RCNTSLLIDHCEGDGKHSYILIDVGKTFR---EQILRWFT--FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDI 141 (326)
Q Consensus 67 r~~ss~li~~~~~~~~~~~iLiD~G~~~~---~~l~~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~ 141 (326)
+..+|++|+. ++..+|||+|.+.. ..+.+.+. +..+.+|++|++||.|.||++|+..+.. .
T Consensus 20 ~~~n~~li~~-----~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~---------~ 85 (317)
T 2zo4_A 20 KTVNLYLLQG-----AGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEG---------L 85 (317)
T ss_dssp CEEEEEEEEE-----TTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHH---------T
T ss_pred CcEEEEEEEc-----CCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHh---------C
Confidence 3467899986 67899999998653 23333333 4555689999999999999999998874 3
Q ss_pred CCccEEeCHHHHHHHHHhCCc----------ccccccccCcc----------c--cccccceeeEeccCCCCceEECCEE
Q 020397 142 DPTPIFLSQFAMESISTKFPY----------LVQKKLKEGQE----------V--RRVAQLDWKIIEEDCDKPFVASGLK 199 (326)
Q Consensus 142 ~~~~iy~~~~~~~~l~~~~~~----------~~~~~~~~g~~----------~--~~~~~~~~~~i~~~~~~~~~~~~~~ 199 (326)
+++||+++...+.+...... .+.....+... . ...+......+++ |+.+.+++.+
T Consensus 86 -~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~l~~gg~~ 162 (317)
T 2zo4_A 86 -GARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRD--GEALEVAGKR 162 (317)
T ss_dssp -TCEEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECT--TCEEEETTEE
T ss_pred -CCEEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECC--CCEEEeCCce
Confidence 68899998776544331100 00000000000 0 0000123356777 8999999999
Q ss_pred EEEEEee-eCCCceeEEEEEcCceeEEEeCCCCC
Q 020397 200 FVPLPVM-HGEDYVCLGFLFGEKCRVAYISDVSR 232 (326)
Q Consensus 200 v~~~~~~-H~~~~~~~g~~i~~~~~i~ysgDt~~ 232 (326)
+++++++ |++ .+++|.+. +.+++|+||+..
T Consensus 163 ~~~i~tpGHt~--g~~~~~~~-~~~~lf~GD~~~ 193 (317)
T 2zo4_A 163 LRVLWTPGHAD--GHAAFYLE-EEGVLLAGDALL 193 (317)
T ss_dssp EEEEECCSSST--TCEEEEET-TTTEEEEETSCC
T ss_pred EEEEECCCCCc--ccEEEEeC-CCCEEEECCEec
Confidence 9999986 887 67787763 358999999975
No 55
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.51 E-value=2.1e-14 Score=126.84 Aligned_cols=144 Identities=15% Similarity=0.104 Sum_probs=89.7
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHH---------------HHHHHhhh--cCCCCCccEEEecCCChhhhCChhHHhh
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFR---------------EQILRWFT--FHKIPRVDSIILTHEHADAVLGLDDIRA 131 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~---------------~~l~~~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~ 131 (326)
.+|++|+. +++.+|||||.+.. ..+...+. +..+.+|++||+||.|.||++|+..+..
T Consensus 48 ~n~~lI~~-----~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~ 122 (280)
T 3esh_A 48 THPILIQT-----AQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAG 122 (280)
T ss_dssp CCCEEEEC-----SSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTS
T ss_pred EEEEEEEE-----CCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCccccccc
Confidence 47999996 78899999997531 11222222 5667799999999999999999988764
Q ss_pred cccCCCCCCCCCccEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCC
Q 020397 132 VQPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGED 210 (326)
Q Consensus 132 ~~~~~~~~~~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~ 210 (326)
.. ..+..+||+++...+.+....... ....... ..... ..++..++. +..+. +++++ ++++ |++
T Consensus 123 ~~------~fp~a~i~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~--~~~l~-~gi~~--~~~pGHt~- 187 (280)
T 3esh_A 123 HA------IFENAIHVVQQDEWHEFIAPNIRS-KSTYWDK-NKGDY-SNKLILFEK--HFEPV-PGIKM--QHSGGHSF- 187 (280)
T ss_dssp CC------SSTTCEEEEEHHHHHHHHSCCTTG-GGTSCGG-GCCGG-GGGEEEESS--EECSS-TTEEE--EECCSSST-
T ss_pred cc------CCCCCEEEECHHHHHHhhCccccc-ccchhhh-hhhhh-hheEEEeCC--CCeEc-CCEEE--EEcCCCCc-
Confidence 10 124789999998877664311000 0000000 00001 112344443 32222 34554 5554 777
Q ss_pred ceeEEEEEcCc-eeEEEeCCCCCC
Q 020397 211 YVCLGFLFGEK-CRVAYISDVSRI 233 (326)
Q Consensus 211 ~~~~g~~i~~~-~~i~ysgDt~~~ 233 (326)
.+++|+++.+ ++++|+||+-+.
T Consensus 188 -g~~~~~i~~~~~~vlftGD~~~~ 210 (280)
T 3esh_A 188 -GHTIITIESQGDKAVHMGDIFPT 210 (280)
T ss_dssp -TCEEEEEEETTEEEEECGGGSCS
T ss_pred -ccEEEEEEECCcEEEEEEccCCc
Confidence 7899999866 899999999874
No 56
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.51 E-value=5.8e-14 Score=120.03 Aligned_cols=127 Identities=15% Similarity=0.215 Sum_probs=91.5
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHH--HHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFR--EQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~--~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
.+|++|+. ++..+|||||.+.. ..+.+.+......+|++|++||.|.||++|+..+... .++|
T Consensus 41 ~n~~li~~-----~~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~----------~~~v 105 (227)
T 1mqo_A 41 SNGLVLNT-----SKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER----------GIKA 105 (227)
T ss_dssp EEEEEEEE-----TTEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH----------TCEE
T ss_pred ceEEEEEe-----CCeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhC----------CcEE
Confidence 46899986 77899999998752 3333333222257899999999999999999988752 5789
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEE-Ee-eeCCCceeEEEEEcCceeE
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPL-PV-MHGEDYVCLGFLFGEKCRV 224 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~-~~-~H~~~~~~~g~~i~~~~~i 224 (326)
|+++...+.++.. .+ + .....+.. ++.+.+++.+|+.+ ++ .|++ .+++|.+.. .++
T Consensus 106 ~~~~~~~~~~~~~-~~-------~---------~~~~~~~~--~~~~~~g~~~i~~~~~~pgHt~--g~~~~~~~~-~~~ 163 (227)
T 1mqo_A 106 HSTALTAELAKKN-GY-------E---------EPLGDLQT--VTNLKFGNMKVETFYPGKGHTE--DNIVVWLPQ-YNI 163 (227)
T ss_dssp ECBHHHHHHHHHT-TC-------C---------CCCCCBCS--EEEEEETTEEEEEECCCCSSSS--SCCEEEETT-TTE
T ss_pred EeccchHHHHHhc-CC-------C---------CCccccCC--CCeeeECCEEEEEEecCCCCCC--CCEEEEECC-CCE
Confidence 9999887655431 11 0 01123445 67788999999987 44 5887 788888753 589
Q ss_pred EEeCCCCC
Q 020397 225 AYISDVSR 232 (326)
Q Consensus 225 ~ysgDt~~ 232 (326)
+|+||+..
T Consensus 164 lf~GD~~~ 171 (227)
T 1mqo_A 164 LVGGCLVK 171 (227)
T ss_dssp EEEETTSC
T ss_pred EEEeeeee
Confidence 99999965
No 57
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.48 E-value=2.5e-13 Score=120.42 Aligned_cols=134 Identities=16% Similarity=0.177 Sum_probs=92.8
Q ss_pred cccccEEEEEeccCCCCccEEEEecCccH----HHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCC
Q 020397 66 YRCNTSLLIDHCEGDGKHSYILIDVGKTF----REQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDI 141 (326)
Q Consensus 66 ~r~~ss~li~~~~~~~~~~~iLiD~G~~~----~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~ 141 (326)
.+..+|++|+. ++..+|||||.+. ...+.+.+...+. +|++||+||.|.||++|+..|..... ..
T Consensus 29 ~~~~n~~li~~-----~~~~ilID~G~~~~~~~~~~l~~~l~~~~~-~i~~Ii~TH~H~DH~gg~~~l~~~~~-----~~ 97 (289)
T 4ad9_A 29 LQGTNTYLVGT-----GPRRILIDTGEPAIPEYISCLKQALTEFNT-AIQEIVVTHWHRDHSGGIGDICKSIN-----ND 97 (289)
T ss_dssp BTCCEEEEECS-----SSSEEEECCCSTTCHHHHHHHHHHHHHTTC-CEEEEECSCSSHHHHTTHHHHHHHSC-----CS
T ss_pred CCceEEEEEec-----CCceEEEeCCCCCChHHHHHHHHHHHHcCC-CceEEEEcCCCCcccccHHHHHHhhc-----cC
Confidence 34577999985 6789999999642 2233333332333 79999999999999999999987521 12
Q ss_pred CCccEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcC
Q 020397 142 DPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGE 220 (326)
Q Consensus 142 ~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~ 220 (326)
..+++|+++... ...... .. ....+..+.+ |+.+.+++.++++++++ |++ .+++|.+..
T Consensus 98 ~~~~v~~~~~~~-----~~~~~~-----~~------~~~~~~~~~~--g~~~~~gg~~~~~~~~pGHt~--~~~~~~~~~ 157 (289)
T 4ad9_A 98 TTYCIKKLPRNP-----QREEII-----GN------GEQQYVYLKD--GDVIKTEGATLRVLYTPGHTD--DHMALLLEE 157 (289)
T ss_dssp SCCCEEECCCSS-----CCCCCB-----TT------TTBCEEECCT--TCEEEETTEEEEEEECCSSST--TCEEEEETT
T ss_pred CCceEEecCCCc-----chhhhc-----cC------CCCceEEcCC--CCEEEeCCeEEEEEECCCCCC--CCEEEEEcC
Confidence 467888875321 011010 00 1134567788 89999999999999885 776 788888853
Q ss_pred ceeEEEeCCCC
Q 020397 221 KCRVAYISDVS 231 (326)
Q Consensus 221 ~~~i~ysgDt~ 231 (326)
.+++|+||+-
T Consensus 158 -~~~lftGD~~ 167 (289)
T 4ad9_A 158 -ENAIFSGDCI 167 (289)
T ss_dssp -TTEEEEETSS
T ss_pred -CCEEEEeccc
Confidence 4699999984
No 58
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.48 E-value=1e-13 Score=120.63 Aligned_cols=122 Identities=14% Similarity=0.166 Sum_probs=87.2
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEe
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFL 148 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~ 148 (326)
++||+|... ..+..+|||+|... .+.+.+...+ .+|++|++||.|.||++|+..|... .+++||+
T Consensus 12 n~~yli~~~---~~~~~~lID~g~~~--~i~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~---------~~~~v~~ 76 (254)
T 1xm8_A 12 NYAYILHDE---DTGTVGVVDPSEAE--PIIDSLKRSG-RNLTYILNTHHHYDHTGGNLELKDR---------YGAKVIG 76 (254)
T ss_dssp EEEEEEECT---TTCCEEEECCSSHH--HHHHHHHHHT-CCCCEEECSSCCHHHHTTHHHHHHH---------HCCEEEE
T ss_pred eEEEEEEEC---CCCEEEEEeCCCHH--HHHHHHHHcC-CCccEEEECCCCCcccccHHHHHHH---------cCCeEEE
Confidence 569999841 13579999999542 2233232223 3799999999999999999998764 2578999
Q ss_pred CHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcCceeEEEe
Q 020397 149 SQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGEKCRVAYI 227 (326)
Q Consensus 149 ~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~~~~i~ys 227 (326)
++...+.+ ++ ....+.+ |+.+.+++.+++.++++ |++ ++++|.+.. .+++|+
T Consensus 77 ~~~~~~~~-------------~~---------~~~~~~~--g~~~~lg~~~~~vi~tPGHt~--g~~~~~~~~-~~~lft 129 (254)
T 1xm8_A 77 SAMDKDRI-------------PG---------IDMALKD--GDKWMFAGHEVHVMDTPGHTK--GHISLYFPG-SRAIFT 129 (254)
T ss_dssp EGGGGGGS-------------TT---------EEEEECT--TCEEEETTEEEEEEECCSSSS--SCEEEEEGG-GTEEEE
T ss_pred chhhhhcC-------------CC---------CceeeCC--CCEEEECCEEEEEEECCCCCC--CcEEEEECC-CCEEEE
Confidence 87653211 01 1145666 88999999999998875 887 788998853 479999
Q ss_pred CCCCC
Q 020397 228 SDVSR 232 (326)
Q Consensus 228 gDt~~ 232 (326)
||+-.
T Consensus 130 GD~l~ 134 (254)
T 1xm8_A 130 GDTMF 134 (254)
T ss_dssp ETTEE
T ss_pred cCccc
Confidence 99954
No 59
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.48 E-value=3.9e-13 Score=124.46 Aligned_cols=126 Identities=17% Similarity=0.196 Sum_probs=94.0
Q ss_pred cEEEEEeccCCCCccEEEEecCcc-HHHHHHHhhh-cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEE
Q 020397 70 TSLLIDHCEGDGKHSYILIDVGKT-FREQILRWFT-FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIF 147 (326)
Q Consensus 70 ss~li~~~~~~~~~~~iLiD~G~~-~~~~l~~~~~-~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy 147 (326)
.||||.. +++.+|||+|.. ....+.+.+. ..++.+|++|++||.|+||+++++.+++.. .++++||
T Consensus 53 NsYLI~~-----~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~-------~~~~~v~ 120 (410)
T 4dik_A 53 NAYLVKL-----NGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTI-------GHDVEII 120 (410)
T ss_dssp EEEEEEC-----SSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHH-------CSCCEEE
T ss_pred EEEEEEE-----CCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHc-------CCCCEEE
Confidence 5899985 778999999964 3344444333 346678999999999999999999987642 3578999
Q ss_pred eCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee--eCCCceeEEEEEcCceeEE
Q 020397 148 LSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM--HGEDYVCLGFLFGEKCRVA 225 (326)
Q Consensus 148 ~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~--H~~~~~~~g~~i~~~~~i~ 225 (326)
+++.....+...++. ..+..+.+ |+.+.+|+.++++++++ |.+ .++.+..+ +++
T Consensus 121 ~s~~~~~~l~~~~~~-----------------~~~~~v~d--Gd~l~lG~~~L~~i~tPg~H~p--~~~~~y~~---~iL 176 (410)
T 4dik_A 121 ASNFGKRLLEGFYGI-----------------KDVTVVKD--GEEREIGGKKFKFVMTPWLHWP--DTMVTYLD---GIL 176 (410)
T ss_dssp ECHHHHHHHHHHHCC-----------------CCEEECCT--TCEEEETTEEEEEEECTTSSST--TCEEEEET---TEE
T ss_pred eCHHHHHHHHhhcCc-----------------cceeEecC--CCEEeecceEEEEecCCCCCCC--CCeeEEeC---Cce
Confidence 999888777653211 23456777 99999999999988886 666 45544443 799
Q ss_pred EeCCCC
Q 020397 226 YISDVS 231 (326)
Q Consensus 226 ysgDt~ 231 (326)
|+||..
T Consensus 177 FsgD~f 182 (410)
T 4dik_A 177 FSCDVG 182 (410)
T ss_dssp EEETTT
T ss_pred Eccccc
Confidence 999983
No 60
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.47 E-value=3.8e-13 Score=120.43 Aligned_cols=130 Identities=18% Similarity=0.184 Sum_probs=88.2
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcC----C----CCCccEEEecCCChhhhCChhHHhhcccCCCCCC
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFH----K----IPRVDSIILTHEHADAVLGLDDIRAVQPYSATND 140 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~----~----~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~ 140 (326)
++|++|... .++..+|||+|.... .+.+.+... + +.+|++||+||.|.||++|+..|....... .+
T Consensus 40 n~~ylI~~~---~~~~~ilID~G~~~~-~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~--~~ 113 (311)
T 2p18_A 40 NFSYLINDH---TTHTLAAVDVNADYK-PILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAM--NS 113 (311)
T ss_dssp EEEEEEEET---TTTEEEEESCCSCCH-HHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSC--C-
T ss_pred cEEEEEEeC---CCCcEEEEeCCCChH-HHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhc--cc
Confidence 558999841 136799999974432 222222222 3 368999999999999999999987642110 11
Q ss_pred CCCccEEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEc
Q 020397 141 IDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFG 219 (326)
Q Consensus 141 ~~~~~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~ 219 (326)
..+++||+++... + ++ ....+.+ |+.+.+++.+|+.++++ |++ ++++|.++
T Consensus 114 ~~~~~v~~~~~~~------~---------~~---------~~~~l~~--g~~l~lg~~~l~vi~tPGHT~--g~i~~~~~ 165 (311)
T 2p18_A 114 TVPVVVVGGANDS------I---------PA---------VTKPVRE--GDRVQVGDLSVEVIDAPCHTR--GHVLYKVQ 165 (311)
T ss_dssp -CCCEEEEEGGGT------C---------TT---------CSEEECT--TCEEEETTEEEEEEECCSSST--TCEEEEEE
T ss_pred CCCCEEEEechhc------C---------CC---------CceEeCC--CCEEEECCeEEEEEECCCCCc--ccEEEEEe
Confidence 2268899986531 1 10 1145666 88999999999999984 887 78999985
Q ss_pred C-c---e-eEEEeCCCCC
Q 020397 220 E-K---C-RVAYISDVSR 232 (326)
Q Consensus 220 ~-~---~-~i~ysgDt~~ 232 (326)
. + . +++|+||+.+
T Consensus 166 ~~~~~~~~~~lftGD~l~ 183 (311)
T 2p18_A 166 HPQHPNDGVALFTGDTMF 183 (311)
T ss_dssp CTTCGGGCEEEEEETTEE
T ss_pred cCCcCCcCCEEEEcCccc
Confidence 3 2 4 8999999954
No 61
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.46 E-value=9.1e-13 Score=112.79 Aligned_cols=178 Identities=15% Similarity=0.120 Sum_probs=106.4
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH--HHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF--REQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~--~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
.+|++|+. ++..+|||||.+. ...+.+.+......+|++|++||.|.||++|+..|.. ..++|
T Consensus 26 ~n~~li~~-----~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~----------~~~~v 90 (233)
T 3q6v_A 26 ENSMVYIG-----TDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKT----------LGAKI 90 (233)
T ss_dssp EEEEEEEC-----SSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHH----------TTCEE
T ss_pred CcEEEEEe-----CCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhh----------CCCEE
Confidence 45888885 7789999999864 3344444434456789999999999999999998873 36899
Q ss_pred EeCHHHHHHHHHhCCccc--ccccccCccccccc-cceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCcee
Q 020397 147 FLSQFAMESISTKFPYLV--QKKLKEGQEVRRVA-QLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEKCR 223 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~-~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~ 223 (326)
|+++...+.+........ ....... +.... ......++. +..+..+++++...+..|++ .++.+.+.. .+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~l~~~~~~v~~~~pGHt~--g~~~~~~~~-~~ 163 (233)
T 3q6v_A 91 VATQMTYDLQKSQWGSIVNFTRQGNNK--YPNLEKSLPDTVFPG--DFNLQNGSIRAMYLGEAHTK--DGIFVYFPA-ER 163 (233)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHSTT--CCCCCCCCCSEEESS--CEEETTTTEEEECCCCSSSS--SCCEEEETT-TT
T ss_pred EEcHHHHHHHHhhhHHHHHHHhccccc--cccccccCCCEEeCC--CeEEcCceEEEEECCCCCCc--CcEEEEecc-CC
Confidence 999988776654221100 0000000 00000 011123444 43444445665555446888 677777743 46
Q ss_pred EEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHc------CCCeEEEEeecc
Q 020397 224 VAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRL------CPKQALLIGMTH 291 (326)
Q Consensus 224 i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~------~~k~lvl~H~~~ 291 (326)
++| ||+-... . + . . + .......+.++++.++++ +++.+++.|-..
T Consensus 164 ~lf-gD~~~~~-~----~-~-----~--~---------~~~~~~~~~~sl~~l~~l~~~~~~~~~~i~pgHg~~ 214 (233)
T 3q6v_A 164 VLY-GNCILKE-N----L-G-----N--M---------SFANRTEYPKTLEKLKGLIEQGELKVDSIIAGHDTP 214 (233)
T ss_dssp EEE-CTTTSCS-S----C-C-----C--C---------TTCCTTHHHHHHHHHHHHHHTTSSCCSEEECSSSSS
T ss_pred EEE-Cceeccc-c----C-C-----C--C---------CcCCHHHHHHHHHHHHHhhhcccCCCeEEECCCCCc
Confidence 888 9986531 0 0 1 0 0 011234566677777777 889999987443
No 62
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.45 E-value=8.1e-14 Score=131.72 Aligned_cols=129 Identities=18% Similarity=0.204 Sum_probs=90.9
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEEe
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIFL 148 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy~ 148 (326)
.+|++|... .+++.+|||+|.+....+ +.+..... +|++||+||.|.||++|+..|.+. ..++||+
T Consensus 37 ~nsyli~~~---~~~~~vlID~g~~~~~~~-~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~---------~~a~v~~ 102 (466)
T 3r2u_A 37 QASYLIGCQ---KTGEAMIIDPIRDLSSYI-RVADEEGL-TITHAAETHIHADFASGIRDVAIK---------LNANIYV 102 (466)
T ss_dssp EEEEEEEET---TTCEEEEESCCSCCHHHH-HHHHHHTC-EEEEEECSSCCSSSCCCHHHHHHH---------HCCEEEE
T ss_pred ceEEEEEeC---CCCEEEEEcCCCCHHHHH-HHHHHCCC-eeeEEEECCCChhhhccHHHHHHh---------hCCeEEE
Confidence 558888420 267899999997654422 22322233 699999999999999999999864 2678998
Q ss_pred CHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEee-eCCCceeEEEEEcCc------
Q 020397 149 SQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVM-HGEDYVCLGFLFGEK------ 221 (326)
Q Consensus 149 ~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-H~~~~~~~g~~i~~~------ 221 (326)
++..... +.+.. .+ .....+.+ |+.+.+++++|++++++ |++ .+++|.+...
T Consensus 103 ~~~~~~~----~~~~~------------~~-~~~~~~~~--g~~l~~g~~~l~vi~tPGHT~--g~~~~~~~~~~~~~~~ 161 (466)
T 3r2u_A 103 SGESDDT----LGYKN------------MP-NHTHFVQH--NDDIYVGNIKLKVLHTPGHTP--ESISFLLTDEGAGAQV 161 (466)
T ss_dssp ECCSCTT----TSCCS------------CC-TTCEEECT--TCEEEETTEEEEEEECCSSST--TCEEEEEECGGGTCCS
T ss_pred Ccchhhh----hcccc------------CC-CCCEEeCC--CCEEEECCEEEEEEECCCCCC--CCEEEEEcCCCccCCC
Confidence 8753211 11100 11 13356777 89999999999999997 887 7889988753
Q ss_pred eeEEEeCCCCC
Q 020397 222 CRVAYISDVSR 232 (326)
Q Consensus 222 ~~i~ysgDt~~ 232 (326)
.+++|+||+-+
T Consensus 162 ~~~lftGD~lf 172 (466)
T 3r2u_A 162 PMGLFSGDFIF 172 (466)
T ss_dssp CCEEEEETTBC
T ss_pred ceEEEECCccc
Confidence 35999999954
No 63
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.45 E-value=4.5e-13 Score=114.59 Aligned_cols=126 Identities=17% Similarity=0.201 Sum_probs=87.8
Q ss_pred cccEEEEEeccCCCCccEEEEecCccH--HHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKTF--REQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~~--~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
..+|++|+. ++..+|||+|.+. ...+.+.+...+. +|++|++||.|.||++|+..+.. ..++
T Consensus 32 ~~n~~li~~-----~~~~iliD~g~~~~~~~~~~~~l~~~g~-~i~~ii~TH~H~DH~gg~~~l~~----------~~~~ 95 (228)
T 1jjt_A 32 PKHGLVVLV-----NAEAYLIDTPFTAKDTEKLVTWFVERGY-KIKGSISSHFHSDSTGGIEWLNS----------RSIP 95 (228)
T ss_dssp EEEEEEEEE-----TTEEEEESCCSSHHHHHHHHHHHHTTTC-EEEEEECSSSSHHHHTTHHHHHH----------TTCC
T ss_pred cceEEEEEE-----CCcEEEEeCCCChhhHHHHHHHHHHcCC-CeeEEEeCCCChhhhccHHHHHh----------CCCE
Confidence 357899986 6789999999753 2344444443443 89999999999999999998874 1678
Q ss_pred EEeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEE-Ee-eeCCCceeEEEEEcCcee
Q 020397 146 IFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPL-PV-MHGEDYVCLGFLFGEKCR 223 (326)
Q Consensus 146 iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~-~~-~H~~~~~~~g~~i~~~~~ 223 (326)
||+++...+.+...... .+. ..+. +..+.+++.+++.+ ++ .|++ .+++|.+.. .+
T Consensus 96 v~~~~~~~~~~~~~~~~--------------~~~---~~~~---g~~~~l~~~~i~~~~~~pGHt~--g~~~~~~~~-~~ 152 (228)
T 1jjt_A 96 TYASELTNELLKKDGKV--------------QAT---NSFS---GVNYWLVKNKIEVFYPGPGHTP--DNVVVWLPE-RK 152 (228)
T ss_dssp EEEEHHHHHHHHHTTCC--------------CCS---EEEC---SSCCEEETTTEEEECCCCSSST--TCCEEEETT-TT
T ss_pred EEEChHHHHHHHhcCCc--------------Ccc---cccc---CcceEecCceEEEEecCCCCCC--CcEEEEECC-Cc
Confidence 99999888766542110 000 1222 45566777667765 44 4887 678887753 47
Q ss_pred EEEeCCCCC
Q 020397 224 VAYISDVSR 232 (326)
Q Consensus 224 i~ysgDt~~ 232 (326)
++|+||+-.
T Consensus 153 ~lf~GD~~~ 161 (228)
T 1jjt_A 153 ILFGGCFIK 161 (228)
T ss_dssp EEEEETTCC
T ss_pred EEEEecccc
Confidence 999999975
No 64
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.43 E-value=3.5e-13 Score=114.95 Aligned_cols=140 Identities=11% Similarity=0.070 Sum_probs=87.9
Q ss_pred ccEEEEEeccCCCCccEEEEecCcc--HHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKT--FREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~--~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
.+|++|+. ++..+|||+|.+ ....+.+.+......+|++|++||.|.||++|+..+.+ .+++|
T Consensus 23 ~n~~li~~-----~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~----------~~~~v 87 (227)
T 3iog_A 23 ENSMVYFG-----AKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS----------IGAKV 87 (227)
T ss_dssp EEEEEEEC-----SSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH----------TTCEE
T ss_pred CcEEEEEe-----CCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh----------CCCeE
Confidence 56888885 778999999974 33455555555567899999999999999999998864 36889
Q ss_pred EeCHHHHHHHHHhCCccc--ccccccCccccccccceeeEeccCCCCceEECCEEEEEEEe--eeCCCceeEEEEEcCce
Q 020397 147 FLSQFAMESISTKFPYLV--QKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPV--MHGEDYVCLGFLFGEKC 222 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~--~H~~~~~~~g~~i~~~~ 222 (326)
|+++...+.+........ ....... ++.........+.. + .+.+++.+++.+.+ .|++ .+++|.+.. .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~-~~~l~~~~~~~~~~~pGHt~--g~~~~~~~~-~ 159 (227)
T 3iog_A 88 VSTRQTRDLMKSDWAEIVAFTRKGLPE--YPDLPLVLPNVVHD--G-DFTLQEGKVRAFYAGPAHTP--DGIFVYFPD-E 159 (227)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHCTT--SCCCCCCCCSEEES--S-CEEETTTTEEEECCCCSSSS--SCCEEEETT-T
T ss_pred EECHHHHHHHHHhhHHHHHHhhcCCCC--CCCccccCCCEeec--C-eEEEcCcEEEEEecCCCCCC--CcEEEEecC-C
Confidence 999988876654221100 0000000 00000000011122 3 47777766666664 5888 677777753 4
Q ss_pred eEEEeCCCCC
Q 020397 223 RVAYISDVSR 232 (326)
Q Consensus 223 ~i~ysgDt~~ 232 (326)
+++| ||+-.
T Consensus 160 ~~lf-gd~l~ 168 (227)
T 3iog_A 160 QVLY-GGCIL 168 (227)
T ss_dssp TEEE-CGGGS
T ss_pred CEEE-ccccc
Confidence 6888 88643
No 65
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.43 E-value=8.4e-13 Score=115.58 Aligned_cols=131 Identities=17% Similarity=0.097 Sum_probs=89.9
Q ss_pred cccEEEEEeccCCCCccEEEEecCcc--HHHHHHHhhhcC-CCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCc
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKT--FREQILRWFTFH-KIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPT 144 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~--~~~~l~~~~~~~-~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~ 144 (326)
..+|++|+. ++..+|||+|.+ ....+.+.+... + .+|++|++||.|.||++|+..+.+ .+.
T Consensus 67 ~~n~~li~~-----~~~~iLID~G~~~~~~~~l~~~l~~~~g-~~i~~VilTH~H~DH~gg~~~~~~----------~~a 130 (265)
T 2y8b_A 67 SSNGLIVRD-----ADELLLIDTAWGAKNTVALLAEIEKQIG-LPVTRSISTHFHDDRVGGVDVLRA----------AGV 130 (265)
T ss_dssp EEEEEEEEE-----TTEEEEESCCSSHHHHHHHHHHHHHHTC-SCEEEEECSSSSHHHHTTHHHHHH----------TTC
T ss_pred cceEEEEEE-----CCeEEEEeCCCCHHHHHHHHHHHHHhcC-CCeEEEEeCCCChhhcCCHHHHhh----------CCC
Confidence 457899986 778999999975 233344433322 3 379999999999999999998764 268
Q ss_pred cEEeCHHHHHHHHHhCCcccccccccCccccccccceeeE-eccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCcee
Q 020397 145 PIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKI-IEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEKCR 223 (326)
Q Consensus 145 ~iy~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~-i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~ 223 (326)
+||+++...+.+....... + ...+.. .++ ++.+.++++++......|++ ++++|.+.. .+
T Consensus 131 ~v~~~~~~~~~~~~~~~~~------~--------~~~~~~~~~~--~~~~~~g~~~v~~~~pGHt~--g~~~~~~~~-~~ 191 (265)
T 2y8b_A 131 ATYTSPLTRQLAEAAGNEV------P--------AHSLKALSSS--GDVVRFGPVEVFYPGAAHSG--DNLVVYVPA-VR 191 (265)
T ss_dssp EEEECHHHHHHHHHTTCCC------C--------SEECSSCSST--TEEEEETTEEEEECCSSSST--TCCEEEETT-TT
T ss_pred eEEECHHHHHHHHhccccc------c--------cccccccCCC--CcEEeecCEEEEecCCCCCC--CCEEEEecC-CC
Confidence 9999999887765432110 0 000111 234 66777888888533335888 678888754 57
Q ss_pred EEEeCCCCCC
Q 020397 224 VAYISDVSRI 233 (326)
Q Consensus 224 i~ysgDt~~~ 233 (326)
++|+||+-..
T Consensus 192 ~lf~GD~~~~ 201 (265)
T 2y8b_A 192 VLFGGCAVHE 201 (265)
T ss_dssp EEEEETTSCC
T ss_pred EEEEcccccc
Confidence 9999999764
No 66
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.42 E-value=1e-12 Score=113.57 Aligned_cols=181 Identities=12% Similarity=0.029 Sum_probs=108.7
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH--HHHHHHhhhc-CCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF--REQILRWFTF-HKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~--~~~l~~~~~~-~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
.+|++|+. +++..+|||||.+. ...+.+.+.. .+...+ +|++||.|.||++|+..+.. .+++
T Consensus 30 ~n~~li~~----~~~~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~-~vi~TH~H~DH~gg~~~l~~----------~~~~ 94 (246)
T 2fhx_A 30 SNVLVAKM----LDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKV-VAINTHFHLDGTGGNEIYKK----------MGAE 94 (246)
T ss_dssp EEEEEEEC----TTSEEEEESCCSSHHHHHHHHHHHHHHHCCSEE-EEECCSSSHHHHTTHHHHHH----------TTCE
T ss_pred CCEEEEEe----CCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCcE-EEEeCCCCccccChHHHHhh----------cCCE
Confidence 45888874 13468999999753 2334333322 245556 79999999999999988864 1679
Q ss_pred EEeCHHHHHHHHHhCCcccc--ccccc--Cc-----cccccccceeeEeccCCCCceEECCEEEEEEE-ee-eCCCceeE
Q 020397 146 IFLSQFAMESISTKFPYLVQ--KKLKE--GQ-----EVRRVAQLDWKIIEEDCDKPFVASGLKFVPLP-VM-HGEDYVCL 214 (326)
Q Consensus 146 iy~~~~~~~~l~~~~~~~~~--~~~~~--g~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~-~~-H~~~~~~~ 214 (326)
||+++...+.+......... ..... +. .....+...+..+.+ ++.+.+++.+++.+. ++ |++ +++
T Consensus 95 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~l~~g~~~i~~~~~~pGHt~--g~~ 170 (246)
T 2fhx_A 95 TWSSDLTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQ--GKVFSFSNELVEVSFPGPAHSP--DNV 170 (246)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTT--CEEEEETTEEEEEECCCCSSST--TCC
T ss_pred EEEcHHHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCC--CCEEEECCEEEEEEeCCCCCCC--CCE
Confidence 99999887765432100000 00000 00 000011112334666 788999999999884 54 888 678
Q ss_pred EEEEcCceeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeecc
Q 020397 215 GFLFGEKCRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLCPKQALLIGMTH 291 (326)
Q Consensus 215 g~~i~~~~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~ 291 (326)
+|.+.. .+++|+||+-.. . .. .++ .. ..-..+.++++.+.++.++.+++.|-..
T Consensus 171 ~~~~~~-~~~lf~GD~~~~-~-------~~----~~~-------~~---~~~~~~~~sl~~l~~l~~~~i~pgHg~~ 224 (246)
T 2fhx_A 171 VVYFPK-KKLLFGGCMIKP-K-------EL----GYL-------GD---ANVKAWPDSARRLKKFDAKIVIPGHGEW 224 (246)
T ss_dssp EEEETT-TTEEEEETTCCS-S-------CC----CCC-------TT---CCTTTHHHHHHHGGGSCCSEEEESBSCC
T ss_pred EEEEcC-CCEEEECCEecc-C-------CC----CCC-------CC---CCHHHHHHHHHHHHhCCCCEEECCCCCc
Confidence 888753 589999999752 1 10 010 00 1123455566656667888999987543
No 67
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=99.40 E-value=7.2e-12 Score=109.02 Aligned_cols=209 Identities=15% Similarity=0.111 Sum_probs=109.8
Q ss_pred ccEEEEEeccCCCCccEEEEecCccH--HHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTF--REQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~--~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
..|+||+ . +|||+|.+. ...+.+. +.++. ++|++||.|.||++|+..+ ..++|
T Consensus 32 G~s~lie------~---iLiD~G~~~~l~~~l~~~--gi~~~--~~IvlTH~H~DH~ggl~~l------------~~~~v 86 (267)
T 3h3e_A 32 GFSVLVD------S---VLFDTGKSDVFLKNARKL--GIDLP--KDVLISHGHYDHAGGLLYL------------SGKRV 86 (267)
T ss_dssp SCEEEET------T---EEECCCSSSHHHHHHHHT--TCCCC--SEEECSCSCHHHHGGGGGC------------CSCEE
T ss_pred EeHHeee------e---EEEECCCcHHHHHHHHHC--CcCcC--CEEEECCCChhhhCCHHHh------------cCCEE
Confidence 5689998 4 999999873 2333332 44544 9999999999999999876 25788
Q ss_pred EeCHHHHHHHHHhCCcccccccccCcccc-c-cccceeeEeccCCCCceE-ECCEEEEEEEee-----------------
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVR-R-VAQLDWKIIEEDCDKPFV-ASGLKFVPLPVM----------------- 206 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~-~-~~~~~~~~i~~~~~~~~~-~~~~~v~~~~~~----------------- 206 (326)
|+++...+. ++ ......|..+. . ....+++.++. +.+ ..|+.+..-|-.
T Consensus 87 ~~~~~~~~~---~~----~~~~~ig~~~~~~~~~~~~~~~v~~----~~eI~pgv~~~g~~r~~~~e~~~~~~~~~~g~~ 155 (267)
T 3h3e_A 87 WLRKEALDQ---KY----SGERYAGADWNEVLYYNTGKFVIER----ITEIGKNMFLLGPANLRGKVPTGDFFVERNGER 155 (267)
T ss_dssp EEEGGGGSE---EE----ETTEECCCCHHHHHHHSEEEEECSS----EEEEETTEEEECSCCCTTCCCCSCEEEESSSCE
T ss_pred EECHHHHHh---hh----ccccccCCCccHHHhcCCcEEEeCC----CeEEcCCcEEeCCCCCcccccCCCceEEeCCcc
Confidence 888765321 11 00000010000 0 00012222221 111 123332211000
Q ss_pred ---eCCCceeEEEEEcCc-eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcCCC
Q 020397 207 ---HGEDYVCLGFLFGEK-CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLCPK 282 (326)
Q Consensus 207 ---H~~~~~~~g~~i~~~-~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~~k 282 (326)
.-....++.+ +.+ .-++++|=.-.=-..+++.++.....++..+ +-...... ..--.++++++.+++++++
T Consensus 156 ~~D~~~de~~Lvi--~~~~GlvvitGCsH~GI~Niv~~a~~~~g~~i~~v-iGGfHL~~--~~~~~l~~tl~~l~~~~~~ 230 (267)
T 3h3e_A 156 RKDLFEDEQTLVV--RTKEGLVVITGCSHRGIDNILLDIAETFNERIKMV-VGGFHLLK--SSDDEIEKIVKAFNELGVE 230 (267)
T ss_dssp EECCCTTCCEEEE--EETTEEEEEESCCTTCHHHHHHHHHTTCSSCEEEE-EEECCCTT--SCHHHHHHHHHHHHHTTCC
T ss_pred ccCCCCCcEEEEE--EcCCcEEEEeCCCCcCHHHHHHHHHHHhCCCceEE-EeccccCC--CCHHHHHHHHHHHHhcCCC
Confidence 0011223333 333 4567777553211355666555211233333 33332211 1112456788889999999
Q ss_pred eEEEEeeccccCchhhhHHhHhhhhcCCCCeEEeecceEEeec
Q 020397 283 QALLIGMTHEFDHHKDNEFLAEWSKREGIPVQLSHDGLRIPID 325 (326)
Q Consensus 283 ~lvl~H~~~~~~~~~~~~~l~~~~~~~~~~v~~a~Dg~~i~l~ 325 (326)
+++++|.+....+..+ .+++..++..++||++|+++
T Consensus 231 ~i~~~HCTg~~a~~~L-------~~~lp~~v~~~~~G~~iei~ 266 (267)
T 3h3e_A 231 TVVPCHCTGERAVDIF-------KREFLGKIMDCYAGLKLEVS 266 (267)
T ss_dssp EEEEETTSCHHHHHHH-------HHHCSSEECCCCTTCEEEEC
T ss_pred EEEEECCCCHHHHHHH-------HHHCCCCEEEecCceEEEeC
Confidence 9999999975433222 23345689999999999874
No 68
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.32 E-value=3e-12 Score=112.40 Aligned_cols=135 Identities=16% Similarity=0.139 Sum_probs=83.7
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHH--HHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccE
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFR--EQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~--~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~i 146 (326)
+.|++|.. +++.+|||+|.+.. ..+.+++....-.+|++|++||.|.||++|+..|.+ ..+++
T Consensus 75 ~N~ylv~~-----~~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~----------~~~~v 139 (270)
T 4eyb_A 75 SNGLIVRD-----GGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHA----------AGIAT 139 (270)
T ss_dssp EEEEEEEE-----TTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHH----------TTCEE
T ss_pred eEEEEEEE-----CCEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHH----------CCCeE
Confidence 35788875 78899999997543 344444432223579999999999999999999875 26899
Q ss_pred EeCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCceeEEE
Q 020397 147 FLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEKCRVAY 226 (326)
Q Consensus 147 y~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~i~y 226 (326)
|+++...+.+........... ........+++ +..+..+++++......|++ ..+.+.+.. .+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~--~~~~~~g~~~~~~~~pgHT~--g~~~~~~~~-~~vLf 205 (270)
T 4eyb_A 140 YANALSNQLAPQEGMVAAQHS---------LTFAANGWVEP--ATAPNFGPLKVFYPGPGHTS--DNITVGIDG-TDIAF 205 (270)
T ss_dssp EEEHHHHHHGGGGTCCCCSEE---------ECBCTTSBBCG--GGSTTCTTEEEECCCSSSSS--SCCEEEETT-SSEEE
T ss_pred EECHHHHHHHHhcCccccccc---------cCCCCceeecC--ceeeecCceeEEecccccCC--CCEEEEecC-CcEEE
Confidence 999988766543211110000 00001112233 44455566655443345887 455555543 47999
Q ss_pred eCCCCC
Q 020397 227 ISDVSR 232 (326)
Q Consensus 227 sgDt~~ 232 (326)
+||+-.
T Consensus 206 sGD~l~ 211 (270)
T 4eyb_A 206 GGCLIK 211 (270)
T ss_dssp CTTTCC
T ss_pred EeCeec
Confidence 999864
No 69
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.19 E-value=1.6e-11 Score=102.83 Aligned_cols=119 Identities=20% Similarity=0.116 Sum_probs=81.2
Q ss_pred cccEEEEEeccCCCCccEEEEecCccHHHHHHHhhhcCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCccEE
Q 020397 68 CNTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPIF 147 (326)
Q Consensus 68 ~~ss~li~~~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~iy 147 (326)
..+|++|+. ++..+|||+|..... +.+.+...+ +|++|++||. ||++|+..+.+. .+++||
T Consensus 23 ~~n~~li~~-----~~~~iliD~g~~~~~-~~~~l~~~g--~i~~ii~TH~--DH~gg~~~~~~~---------~~a~v~ 83 (201)
T 2p97_A 23 DFNGFAWIR-----PEGNILIDPVALSNH-DWKHLESLG--GVVWIVLTNS--DHVRSAKEIADQ---------TYTKIA 83 (201)
T ss_dssp EEEEEEECC-----TTCCEEESCCCCCHH-HHHHHHHTT--CCSEEECSSG--GGCTTHHHHHHH---------SCCEEE
T ss_pred ceeEEEEEe-----CCeeEEEECCCCcHH-HHHHHHhcC--CCCEEEECCc--hhhhhHHHHHHh---------cCCEEE
Confidence 456899985 677999999953222 222222223 8999999999 999999988764 258999
Q ss_pred eCHHHHHHHHHhCCcccccccccCccccccccceeeEeccCCCCceEECCEEEEEEEeeeCCCceeEEEEEcCceeEEEe
Q 020397 148 LSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEKCRVAYI 227 (326)
Q Consensus 148 ~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~i~ys 227 (326)
+++...+.+.. .....+++ ++.+. .++++...|..|++ .+++|.+.. +++|+
T Consensus 84 ~~~~~~~~~~~---------------------~~~~~~~~--g~~~~-~~~~~~~~p~gHt~--g~~~~~~~~--~~lf~ 135 (201)
T 2p97_A 84 GPVAEKENFPI---------------------YCDRWLSD--GDELV-PGLKVMELQGSKTP--GELALLLEE--TTLIT 135 (201)
T ss_dssp EEGGGTTSCSS---------------------CCSEEECT--TCBSS-TTEEEEEECSSSST--TEEEEEETT--TEEEE
T ss_pred EcHhHhhhhcc---------------------cCceecCC--CCEEc-ceEEEEECCCCCCC--CcEEEEEcC--CEEEE
Confidence 99865432100 00134555 66553 25666666656988 788898874 89999
Q ss_pred CCCCCC
Q 020397 228 SDVSRI 233 (326)
Q Consensus 228 gDt~~~ 233 (326)
||+...
T Consensus 136 GD~~~~ 141 (201)
T 2p97_A 136 GDLVRA 141 (201)
T ss_dssp CSSEEB
T ss_pred Cccccc
Confidence 999753
No 70
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.16 E-value=1.4e-10 Score=113.70 Aligned_cols=150 Identities=13% Similarity=0.127 Sum_probs=91.3
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHHH--HHHHhhh-cCCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFRE--QILRWFT-FHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~~--~l~~~~~-~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
.++++|+. ++..+|||+|.+... .+.+.+. .....+|++|++||.|.||++|+..|...... ....++
T Consensus 123 ~N~ylI~~-----~~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~----~~~~a~ 193 (658)
T 2cfu_A 123 ANITFIRG-----DSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQV----ASGAVQ 193 (658)
T ss_dssp SCEEEEEC-----SSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHH----HTTSSE
T ss_pred eEEEEEEE-----CCEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhc----cCCCCE
Confidence 45888885 678999999987532 2222221 23467999999999999999999887631000 024689
Q ss_pred EEeCHHHHHHHHH---------------hCCccccccc----ccCc----ccccccc-ceeeEe-ccCCCCceEECCEEE
Q 020397 146 IFLSQFAMESIST---------------KFPYLVQKKL----KEGQ----EVRRVAQ-LDWKII-EEDCDKPFVASGLKF 200 (326)
Q Consensus 146 iy~~~~~~~~l~~---------------~~~~~~~~~~----~~g~----~~~~~~~-~~~~~i-~~~~~~~~~~~~~~v 200 (326)
||+++...+.+.. .+...+.... ..+. ....... ..-..+ ++ |+.+.++|.++
T Consensus 194 V~a~~~~~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~d--G~~l~lgg~~l 271 (658)
T 2cfu_A 194 IIAPAGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGE--GEDLVLDGVPF 271 (658)
T ss_dssp EEEETTHHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTT--EEEEEETTEEE
T ss_pred EEEchhHHHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecC--ceEEEECCEEE
Confidence 9999876554311 1111100000 0000 0000000 011334 35 78889999999
Q ss_pred EEEEee-e-CCCceeEEEEEcCceeEEEeCCCCC
Q 020397 201 VPLPVM-H-GEDYVCLGFLFGEKCRVAYISDVSR 232 (326)
Q Consensus 201 ~~~~~~-H-~~~~~~~g~~i~~~~~i~ysgDt~~ 232 (326)
+.+.++ | ++ .+++|.+.. .+++|+||+-.
T Consensus 272 ~vi~tPGHhTp--g~i~~~~p~-~~vLftGD~v~ 302 (658)
T 2cfu_A 272 TFQNTPGTESP--AEMNIWLPR-QKALLMAENVV 302 (658)
T ss_dssp EEEECTTSSSS--SBEEEEETT-TTEEECTTTSC
T ss_pred EEEeCCCCCCC--CcEEEEECC-CCEEEEecccc
Confidence 998887 6 66 677887753 57999999865
No 71
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=98.41 E-value=1.7e-10 Score=112.72 Aligned_cols=150 Identities=13% Similarity=0.108 Sum_probs=87.8
Q ss_pred ccEEEEEeccCCCCccEEEEecCccHH--HHHHHhhhc-CCCCCccEEEecCCChhhhCChhHHhhcccCCCCCCCCCcc
Q 020397 69 NTSLLIDHCEGDGKHSYILIDVGKTFR--EQILRWFTF-HKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTP 145 (326)
Q Consensus 69 ~ss~li~~~~~~~~~~~iLiD~G~~~~--~~l~~~~~~-~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 145 (326)
..|++|+. ++..+|||+|.+.. ..+.+.+.. ....+|++|++||.|.||++|+..+..... .....++
T Consensus 133 ~N~~lI~~-----~~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~----~~~~~a~ 203 (668)
T 2yhe_A 133 ANMTIIEG-----DSGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEAD----VKAGKVK 203 (668)
Confidence 45788875 67799999997642 233333222 245789999999999999999988874200 0024688
Q ss_pred EEeCHHHHHHH--HH---------hCCccccccccc----------Cccc---ccccc--ceeeEeccCCCCceEECCEE
Q 020397 146 IFLSQFAMESI--ST---------KFPYLVQKKLKE----------GQEV---RRVAQ--LDWKIIEEDCDKPFVASGLK 199 (326)
Q Consensus 146 iy~~~~~~~~l--~~---------~~~~~~~~~~~~----------g~~~---~~~~~--~~~~~i~~~~~~~~~~~~~~ 199 (326)
||+++...+.. .. +..+.+...+.. +... ..... .+...+++ ++.+.++|.+
T Consensus 204 I~a~~~~~e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~d--g~~l~lgg~~ 281 (668)
T 2yhe_A 204 VFAPSGFMEHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKP--YERHTVDGVE 281 (668)
Confidence 99998753211 10 001111000000 0000 00000 11122345 7888999988
Q ss_pred EEEEEee--eCCCceeEEEEEcCceeEEEeCCCCC
Q 020397 200 FVPLPVM--HGEDYVCLGFLFGEKCRVAYISDVSR 232 (326)
Q Consensus 200 v~~~~~~--H~~~~~~~g~~i~~~~~i~ysgDt~~ 232 (326)
++.+.++ |++ ..+.|.+.. .+++|+||+-.
T Consensus 282 l~vi~tPG~Htp--g~i~~~~p~-~~vLftGD~~~ 313 (668)
T 2yhe_A 282 LEFQLTLGSEAP--SDMNIYLPQ-FKVLNTADNAP 313 (668)
Confidence 8888776 887 566665532 57999999853
No 72
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=76.84 E-value=3.5 Score=39.24 Aligned_cols=94 Identities=7% Similarity=-0.133 Sum_probs=57.0
Q ss_pred eeEEEeCCCCCCChh----hHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchh
Q 020397 222 CRVAYISDVSRIPPT----TEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHK 297 (326)
Q Consensus 222 ~~i~ysgDt~~~~~~----~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~ 297 (326)
..++|+|=..+-.+. +...+.. .++++...+ ...-.-.+|.+.+|..++++.++||.++++|=.. .
T Consensus 340 ~~vi~s~~~~~G~~~~~~~~~~~l~~---~g~~v~~~~--~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~-----~ 409 (562)
T 3bk2_A 340 DTVILSSSPIPGNEEAVNRVINRLYA---LGAYVLYPP--TYKVHASGHASQEELKLILNLTTPRFFLPWHGEV-----R 409 (562)
T ss_dssp CEEEECSCCCTTCHHHHHHHHHHHHH---TTCEEECTT--TSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBCH-----H
T ss_pred CEEEEECCCCCCCeEehhhhcCceee---CCCEEEEcc--CCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCCH-----H
Confidence 578888755432221 2222322 225554321 0111457899999999999999999999998221 1
Q ss_pred hhHHhHhhhhcCCC---CeEEeecceEEeec
Q 020397 298 DNEFLAEWSKREGI---PVQLSHDGLRIPID 325 (326)
Q Consensus 298 ~~~~l~~~~~~~~~---~v~~a~Dg~~i~l~ 325 (326)
....+.+.+++.+. ++.+...|..++|.
T Consensus 410 ~~~~~~~~~~~~g~~~~~~~~~~~G~~~~l~ 440 (562)
T 3bk2_A 410 HQMNFKWLAESMSRPPEKTLIGENGAVYRLT 440 (562)
T ss_dssp HHHHHHHHHHTSSSCCSEECCCCTTEEEEEC
T ss_pred HHHHHHHHHHHcCCCcceEEECCCCCEEEEe
Confidence 22334444555443 57888899988874
No 73
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=71.36 E-value=4.1 Score=38.72 Aligned_cols=94 Identities=13% Similarity=0.058 Sum_probs=57.3
Q ss_pred ceeEEEeCCCCCCChh----hHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeeccccCch
Q 020397 221 KCRVAYISDVSRIPPT----TEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHH 296 (326)
Q Consensus 221 ~~~i~ysgDt~~~~~~----~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~ 296 (326)
+.+++|++=..+-.+. +...+.. .++++.. +... ...-.+|.+.+|..++.+.++|+.++++|=..
T Consensus 324 ~d~vi~s~~~ipGne~~~~~~~~~l~~---~g~~v~~-~~~~-~~h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~----- 393 (555)
T 3zq4_A 324 GDTVVFSSSPIPGNTISVSRTINQLYR---AGAEVIH-GPLN-DIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEY----- 393 (555)
T ss_dssp TCEEEECSCCCTTCHHHHHHHHHHHHH---TTCEEEC-SSSS-CCCCCSSCCHHHHHHHHHHSCEEEEEEESBCH-----
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHHH---CCCEEEe-cCCc-ceEEeCCCCHHHHHHHHHHhCCCEEEEcCCCH-----
Confidence 3578888875432332 2222222 2255432 1111 11457899999999999999999999997221
Q ss_pred hhhHHhHhhhhcCCC---CeEEeecceEEee
Q 020397 297 KDNEFLAEWSKREGI---PVQLSHDGLRIPI 324 (326)
Q Consensus 297 ~~~~~l~~~~~~~~~---~v~~a~Dg~~i~l 324 (326)
.......+.+++.+. ++.+...|..++|
T Consensus 394 ~~~~~~~~~a~~~G~~~~~~~~~~nG~~~~l 424 (555)
T 3zq4_A 394 RMQKMHVKLATDCGIPEENCFIMDNGEVLAL 424 (555)
T ss_dssp HHHHHHHHHHHHTTCCGGGBCCCCTTCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEccCCCEEEE
Confidence 222333444555554 6788889998877
No 74
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=67.54 E-value=5.9 Score=38.30 Aligned_cols=57 Identities=23% Similarity=0.154 Sum_probs=42.5
Q ss_pred CCCCCCHHHHHHHHHHcC--CCeEEEEeeccccCchhhhHHhHhhh-hcCCCCeEEeecceEEee
Q 020397 263 HNTHFCFPQTLEAVKRLC--PKQALLIGMTHEFDHHKDNEFLAEWS-KREGIPVQLSHDGLRIPI 324 (326)
Q Consensus 263 ~~~H~~~~~a~~~~~~~~--~k~lvl~H~~~~~~~~~~~~~l~~~~-~~~~~~v~~a~Dg~~i~l 324 (326)
-.+|.+.++..++++.++ |++++++| +. +.....+.+.+ ++.+.++.+...|..++|
T Consensus 576 ~SgHad~~eL~~~i~~~~~~Pk~vi~vH-Ge----~~~~~~~a~~~~~~~g~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 576 FSGHSDRRQLMEYVKRISPKPEKILLCH-GD----NYKTLDLASSIYRTYRIETKTPLNLETVRI 635 (636)
T ss_dssp CCSSCCHHHHHHHHHSCSSCCSEEEEES-SC----HHHHHHHHHHHHHHHCCEEECCCTTCEEEC
T ss_pred cceeCCHHHHHHHHHHhccCCCEEEEEC-CC----HHHHHHHHHHHHHHcCCcEEeCCCCCEEEe
Confidence 568999999999999999 99999998 21 12223344444 234668889999998876
No 75
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=66.69 E-value=7.1 Score=37.78 Aligned_cols=57 Identities=19% Similarity=0.087 Sum_probs=43.2
Q ss_pred CCCCCCHHHHHHHHHHcC--CCeEEEEeeccccCchhhhHHhHhhhh-cCCCCeEEeecceEEee
Q 020397 263 HNTHFCFPQTLEAVKRLC--PKQALLIGMTHEFDHHKDNEFLAEWSK-REGIPVQLSHDGLRIPI 324 (326)
Q Consensus 263 ~~~H~~~~~a~~~~~~~~--~k~lvl~H~~~~~~~~~~~~~l~~~~~-~~~~~v~~a~Dg~~i~l 324 (326)
-.+|.+.++..++++.++ |++++++| +. +.....+.+.++ +++.++.+...|.++.|
T Consensus 580 ~SgHad~~eL~~~i~~~~~~P~~vi~vH-Ge----~~~~~~~a~~~~~~~g~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 580 FSGHSDRRQLMEYVKRMQPRPERVFTEH-GD----EKACVDLASSVYKKLKIETRALTNLETVRL 639 (640)
T ss_dssp CSCSCCHHHHHHHHHTCBSCCSEEEEES-SC----HHHHHHHHHHHHHHHCCEEEECCTTCEEEC
T ss_pred ccccCCHHHHHHHHHHhccCCCEEEEEC-CC----HHHHHHHHHHHHHHcCCeEEeCCCCCEEEe
Confidence 568999999999999998 99999998 22 122334555553 35668899999998876
No 76
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=65.75 E-value=7.3 Score=37.78 Aligned_cols=57 Identities=14% Similarity=0.132 Sum_probs=42.0
Q ss_pred CCCCCCHHHHHHHHHHcC--CCeEEEEeeccccCchhhhHHhHhhh-hcCCCCeEEeecceEEee
Q 020397 263 HNTHFCFPQTLEAVKRLC--PKQALLIGMTHEFDHHKDNEFLAEWS-KREGIPVQLSHDGLRIPI 324 (326)
Q Consensus 263 ~~~H~~~~~a~~~~~~~~--~k~lvl~H~~~~~~~~~~~~~l~~~~-~~~~~~v~~a~Dg~~i~l 324 (326)
-.+|.+.++..++++.++ |++++++| +. ......+.+.+ ++.+.++.+...|..++|
T Consensus 591 ~SgHad~~eL~~~i~~~~~~P~~vi~vH-Ge----~~~~~~la~~~~~~~g~~~~~p~~g~~~~l 650 (651)
T 3af5_A 591 FSGHADRRELMNYVAKVRPRPERIITVH-GE----PQKCLDLATSIHRKFGISTRAPNNLDTIRL 650 (651)
T ss_dssp GCSSCCHHHHHHHHHHCBSCCSEEEEES-SC----HHHHHHHHHHHHHHHCCEEECCCTTCEEEC
T ss_pred ccCcCCHHHHHHHHHHhhcCCCEEEEEc-CC----HHHHHHHHHHHHHhcCCeEEECCCCCEEEe
Confidence 468999999999999999 99999998 21 11223344444 234567888999998875
No 77
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=64.86 E-value=5.3 Score=36.34 Aligned_cols=51 Identities=14% Similarity=-0.011 Sum_probs=38.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhhcCCCCeEEeecceEEee
Q 020397 263 HNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSKREGIPVQLSHDGLRIPI 324 (326)
Q Consensus 263 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~~~~~~v~~a~Dg~~i~l 324 (326)
-.+|.+.+|..++++.++||.++++|=... .+.+ ..+.++.+..+|..++|
T Consensus 379 ~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~--------~~~~---~~~~~~~~~~~g~~~~l 429 (429)
T 2az4_A 379 CSGHAIPEDLDKIIALIEPQVLVPIHTLKP--------EKLE---NPYGERILPERGEQIVL 429 (429)
T ss_dssp CCSSCCHHHHHHHHHHHCCSEEEEESCSCG--------GGCC---CTTSEECCCCTTCEEEC
T ss_pred ecCCCCHHHHHHHHHhhCCCEEEECCCCch--------hhhh---cCCCcEEEeCCCcEEeC
Confidence 468999999999999999999999983221 1111 23457888999998874
No 78
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=62.05 E-value=8.4 Score=35.43 Aligned_cols=63 Identities=16% Similarity=0.195 Sum_probs=40.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhh---cCCCCeEEeecceEEeecC
Q 020397 263 HNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSK---REGIPVQLSHDGLRIPIDL 326 (326)
Q Consensus 263 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~---~~~~~v~~a~Dg~~i~l~~ 326 (326)
-..|.+..+..++++.++|++++++|=.. .......+.+.++.. ..+.++.+..-|.+++|.|
T Consensus 393 ~S~Had~~~l~~~i~~~~p~~v~~vHGe~-~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~ 458 (459)
T 2i7t_A 393 FSAHTDYQQTSEFIRALKPPHVILVHGEQ-NEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNF 458 (459)
T ss_dssp CSCCCCHHHHHHHHHHHCCSEEEEESSCH-HHHHHHHHHHHHHHSSCTTCCCEEECCCTTCCEEEEE
T ss_pred ecccCCHHHHHHHHHhcCCCeEEEeCCCH-HHHHHHHHHHHHHhccccccCceEEeCCCCCEEEEEe
Confidence 36899999999999999999999998221 111112222222111 0135678888888887753
No 79
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=33.73 E-value=27 Score=31.05 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=24.6
Q ss_pred CCCCCHHHHHHHHHHcCCCeEEEEeec
Q 020397 264 NTHFCFPQTLEAVKRLCPKQALLIGMT 290 (326)
Q Consensus 264 ~~H~~~~~a~~~~~~~~~k~lvl~H~~ 290 (326)
..|+++.|..++++.++++++|+||-.
T Consensus 319 SeHss~~EL~~fv~~l~p~~iiptv~~ 345 (367)
T 4b87_A 319 SEHSSYLEMKRFVQWLKPQKIIPTVNV 345 (367)
T ss_dssp CSSCCHHHHHHHHHHHCCSEEEECSSC
T ss_pred cCCCCHHHHHHHHHhcCCCeEECeecC
Confidence 469999999999999999999999844
No 80
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=26.83 E-value=77 Score=28.65 Aligned_cols=55 Identities=16% Similarity=0.146 Sum_probs=37.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEEeeccccCchhhhHHhHhhhhcCCCCeEEeecceEEee
Q 020397 263 HNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFLAEWSKREGIPVQLSHDGLRIPI 324 (326)
Q Consensus 263 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~~~~l~~~~~~~~~~v~~a~Dg~~i~l 324 (326)
...|...++..++++.++ +++++|=. .+..+.|.+..++.+.++.++.-|.++++
T Consensus 377 ~saHad~~~l~~~~~~~~--~v~lvHge-----~~~~~~l~~~l~~~~~~~~~p~~~~~~~~ 431 (431)
T 3iek_A 377 FSGHAGQDELLDWLQGEP--RVVLVHGE-----EEKLLALGKLLALRGQEVSLARFGEGVPV 431 (431)
T ss_dssp GCSSCCHHHHHHHHTTCS--EEEEESSC-----HHHHHHHHHHHHHTTCEEEECCTTCCEEC
T ss_pred ccccCCHHHHHHHHHhCC--eEEEECCC-----HHHHHHHHHHHHHhCCcEEECCCCCEEeC
Confidence 467999999999998764 89999722 11233444444433447888888887764
No 81
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=25.86 E-value=2.3e+02 Score=23.44 Aligned_cols=57 Identities=12% Similarity=-0.022 Sum_probs=37.6
Q ss_pred EEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcC-CCeEEEEe
Q 020397 225 AYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLC-PKQALLIG 288 (326)
Q Consensus 225 ~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~-~k~lvl~H 288 (326)
++.+|... ++.+.+.+++ +|++|+-+..... ...-.....+++.+++.+ ++++|+.-
T Consensus 59 ~~~~D~~d-~~~l~~~~~~-----~d~vi~~a~~~~~-~~~~~~~~~l~~aa~~~g~v~~~v~S~ 116 (313)
T 1qyd_A 59 LIEASLDD-HQRLVDALKQ-----VDVVISALAGGVL-SHHILEQLKLVEAIKEAGNIKRFLPSE 116 (313)
T ss_dssp EECCCSSC-HHHHHHHHTT-----CSEEEECCCCSSS-STTTTTHHHHHHHHHHSCCCSEEECSC
T ss_pred EEeCCCCC-HHHHHHHHhC-----CCEEEECCccccc-hhhHHHHHHHHHHHHhcCCCceEEecC
Confidence 45677765 3566777778 9999987765421 112234566778888888 89988543
No 82
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=25.61 E-value=36 Score=29.86 Aligned_cols=29 Identities=21% Similarity=0.161 Sum_probs=25.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEEeecc
Q 020397 263 HNTHFCFPQTLEAVKRLCPKQALLIGMTH 291 (326)
Q Consensus 263 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~ 291 (326)
-.+|.+.+|..++.+.++|+.++++|-+.
T Consensus 274 ~S~Ha~~~EL~~~~~~~~P~~~iPvh~ge 302 (336)
T 3zdk_A 274 YSDHSSYSELRAFVAALKPCQVVPIVSRR 302 (336)
T ss_dssp CCSSCBHHHHHHHHHHHCCSCEEESCTTS
T ss_pred ecCCCCHHHHHHHHHHhCCCEEEEEECCc
Confidence 46899999999999999999999998443
No 83
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=24.50 E-value=35 Score=21.62 Aligned_cols=10 Identities=30% Similarity=0.471 Sum_probs=8.2
Q ss_pred ceEEEEEeec
Q 020397 21 RSALIFLGTG 30 (326)
Q Consensus 21 ~m~l~~LGtg 30 (326)
||+|.|.++.
T Consensus 1 m~~v~f~a~w 10 (77)
T 1ilo_A 1 MMKIQIYGTG 10 (77)
T ss_dssp CEEEEEECSS
T ss_pred CcEEEEEcCC
Confidence 4889998876
No 84
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=20.56 E-value=1.8e+02 Score=25.35 Aligned_cols=63 Identities=14% Similarity=0.081 Sum_probs=37.6
Q ss_pred eeEEEeCCCCCCChhhHHHhhcCCCCCCcEEEEcCccCCCCCCCCCCHHHHHHHHHHcCCCeEEEEee
Q 020397 222 CRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRLCPKQALLIGM 289 (326)
Q Consensus 222 ~~i~ysgDt~~~~~~~~~~l~~~~~~~~Dlli~e~~~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~ 289 (326)
+++.|.++.....++.++.+.+ +|++++--..+-.+--.++-+.+..+.+++.+++++++.-+
T Consensus 156 ~~v~l~p~~~~~~p~~l~AI~~-----AD~IvlgPGS~~TSI~P~Llv~gi~~Ai~~s~A~kV~v~N~ 218 (332)
T 2ppv_A 156 DRVFLEPSDVEPMNEAIEALEQ-----ADLIVLGPGSLYTSVISNLCVKGISEALLRTSAPKLYVSNV 218 (332)
T ss_dssp EEEEEESCCCCCCHHHHHHHHH-----CSEEEECSSCCCCCCHHHHTSHHHHHHHHHCCSCEEEECCS
T ss_pred eEEEEeCCCCCCCHHHHHHHHh-----CCEEEECCCCCHHHhcccccCchHHHHHHhCCCCEEEEcCC
Confidence 5788877543334577888888 99888755433212223445555555566666666666544
Done!