Query 020405
Match_columns 326
No_of_seqs 111 out of 127
Neff 4.8
Searched_HMMs 46136
Date Fri Mar 29 09:29:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020405.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020405hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04765 DUF616: Protein of un 100.0 4E-106 1E-110 769.7 23.0 267 1-270 38-305 (305)
2 cd04194 GT8_A4GalT_like A4GalT 93.8 0.11 2.4E-06 47.7 5.4 109 108-247 85-199 (248)
3 cd00505 Glyco_transf_8 Members 91.4 0.95 2.1E-05 41.8 8.1 160 54-248 30-201 (246)
4 PF01501 Glyco_transf_8: Glyco 88.4 0.6 1.3E-05 41.5 4.1 112 106-245 86-203 (250)
5 PF03407 Nucleotid_trans: Nucl 77.0 6.5 0.00014 35.1 5.9 90 118-248 66-156 (212)
6 cd06429 GT8_like_1 GT8_like_1 67.9 7.4 0.00016 37.1 4.3 96 53-155 28-148 (257)
7 PLN02718 Probable galacturonos 61.5 17 0.00037 39.1 5.9 96 53-155 341-452 (603)
8 cd02537 GT8_Glycogenin Glycoge 49.2 72 0.0016 29.5 7.4 53 88-141 53-112 (240)
9 cd06432 GT8_HUGT1_C_like The C 47.8 21 0.00045 33.7 3.6 45 109-155 85-130 (248)
10 cd06431 GT8_LARGE_C LARGE cata 44.5 21 0.00046 34.4 3.1 98 53-155 29-135 (280)
11 PLN02742 Probable galacturonos 43.9 41 0.00088 35.8 5.3 121 27-154 229-386 (534)
12 PF03452 Anp1: Anp1; InterPro 43.2 24 0.00051 34.4 3.2 46 110-158 134-179 (269)
13 PRK15171 lipopolysaccharide 1, 38.1 20 0.00044 35.2 2.0 95 53-154 54-154 (334)
14 PF03314 DUF273: Protein of un 37.0 29 0.00062 33.0 2.6 69 112-186 35-105 (222)
15 KOG0400 40S ribosomal protein 34.9 37 0.00081 30.1 2.8 51 147-215 8-58 (151)
16 PLN00176 galactinol synthase 31.1 1E+02 0.0022 30.8 5.6 106 21-141 16-135 (333)
17 PF05637 Glyco_transf_34: gala 21.9 67 0.0014 30.2 2.3 45 202-247 143-193 (239)
18 cd02515 Glyco_transf_6 Glycosy 20.3 92 0.002 30.5 2.9 114 11-136 18-141 (271)
No 1
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=100.00 E-value=4.5e-106 Score=769.71 Aligned_cols=267 Identities=52% Similarity=0.975 Sum_probs=260.2
Q ss_pred CceeeeceeCCCCCCChhcHHHhhcCCEEEEEeeecCCCCCCCCCCCCccccccEEEEEEeehhhHHHHhhccccccCCC
Q 020405 1 MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSA 80 (326)
Q Consensus 1 ~~~~cgf~~~~g~~i~~~d~~~m~~ckiVVyTaIFG~YD~L~~P~~i~~~~~~~vCF~mF~D~~t~~~l~~~~~~~~d~~ 80 (326)
|+|||||++++||||||.|+.+|++|+|||||||||+||+|+||+++++.++++|||+||||++|+++|++++.++ +
T Consensus 38 ~~v~Cgf~~~~gf~i~~~d~~~m~~c~vvV~saIFG~yD~l~qP~~i~~~s~~~vcf~mF~D~~t~~~l~~~~~~~---~ 114 (305)
T PF04765_consen 38 MTVHCGFVKNTGFDISESDRRYMEKCRVVVYSAIFGNYDKLRQPKNISEYSKKNVCFFMFVDEETLKSLESEGHIP---D 114 (305)
T ss_pred ceeccccccCCCCCCCHHHHHHHhcCCEEEEEEecCCCccccCchhhCHHHhcCccEEEEEehhhHHHHHhcCCcc---c
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999998875 3
Q ss_pred CCceeeceEEEEcCCCCCCCccccCCcceeeccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCC
Q 020405 81 GGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRS 160 (326)
Q Consensus 81 ~~~~vg~WrIv~v~~~~~~d~rrn~k~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~c 160 (326)
+++++|+||||+|+++||+|+|||||+||+|||+|||||+|||||||||+|++||++||+++||+++++|||++||.|+|
T Consensus 115 ~~~~ig~WrIv~v~~lp~~d~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H~~R~c 194 (305)
T PF04765_consen 115 ENKKIGIWRIVVVKNLPYDDPRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKHPERNC 194 (305)
T ss_pred cccccCceEEEEecCCCCcchhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCCCCccc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHHHcCCCCcccCC-CCCCCCCcccEEecccCCchhhhHHHHHHHHhcCCCCCccc
Q 020405 161 IYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKK-NTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLS 239 (326)
Q Consensus 161 vyeEa~a~~~~~K~~~~~I~~Qm~~Y~~eGlp~~~~~k-~~~s~l~E~~vIiR~H~~~~nlf~clWfnEv~rfs~RDQLS 239 (326)
|||||+||++++|++++.|++||++|+++|||+|++.+ |+.+|||||+||+|+|++++|+|||+||||+++||+|||||
T Consensus 195 vyeEa~a~~~~~k~~~~~I~~Qm~~Y~~eGlp~~s~~k~~l~s~v~E~~iIiR~H~~~~nlf~clWfnEv~rfs~RDQLS 274 (305)
T PF04765_consen 195 VYEEAEACKRLGKYDPERIDEQMEFYKQEGLPPWSPAKLPLPSDVPEGNIIIRKHNPMSNLFMCLWFNEVERFSPRDQLS 274 (305)
T ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHcCCCcccccccccccCCccceEEEecCCchhHHHHHHHHHHHhcCCCcccch
Confidence 99999999999999999999999999999999997666 88899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcceeccccccccCceeeeecc
Q 020405 240 FGYVVYRLKGLFKFYMFPNCEYNSLFVLHPH 270 (326)
Q Consensus 240 F~Yv~~k~~~~~~~~mf~~~~~~~~f~~~~H 270 (326)
|+||+||++.+++++||++|+|++++++++|
T Consensus 275 F~Yv~wk~~~~~~~~mf~~~~~~~~~~~~~h 305 (305)
T PF04765_consen 275 FPYVLWKLGPKFKLNMFKDCERRQLVVLYRH 305 (305)
T ss_pred HHHHHHHhCCcccchhhhHHHHHHHHHhcCC
Confidence 9999999999999999999999999999998
No 2
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=93.85 E-value=0.11 Score=47.70 Aligned_cols=109 Identities=16% Similarity=0.164 Sum_probs=69.0
Q ss_pred ceeeccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHHH
Q 020405 108 PKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYR 187 (326)
Q Consensus 108 pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I~~Qm~~Y~ 187 (326)
.|++...+||+++--||+|+-+.+.+|+..|.+.-+ ++..+|+..|.... + +... + .
T Consensus 85 ~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~--~~~~~aa~~d~~~~--~-~~~~-----~-------------~ 141 (248)
T cd04194 85 YRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDL--GDNLLAAVRDPFIE--Q-EKKR-----K-------------R 141 (248)
T ss_pred HHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCc--CCCEEEEEecccHH--H-HHHH-----H-------------h
Confidence 388999999999999999999999999999887434 46678887764311 1 0000 0 1
Q ss_pred HcCCCCcccCCCCCCCCCcccEEecccC-----CchhhhHHHHHHHHh-cCCCCCcccHHHHHHHh
Q 020405 188 YEGMEPWSIKKNTVSDVPEGAVIIREHT-----ALSNLFSCLWFNEVN-LLTPRDQLSFGYVVYRL 247 (326)
Q Consensus 188 ~eGlp~~~~~k~~~s~l~E~~vIiR~H~-----~~~nlf~clWfnEv~-rfs~RDQLSF~Yv~~k~ 247 (326)
..+.++ ..+.+-+||++=+-. ...+.++ .|..+.. ++.-.||-.++.+.+..
T Consensus 142 ~~~~~~-------~~~yfNsGv~l~nl~~~r~~~~~~~~~-~~~~~~~~~~~~~DQd~LN~~~~~~ 199 (248)
T cd04194 142 RLGGYD-------DGSYFNSGVLLINLKKWREENITEKLL-ELIKEYGGRLIYPDQDILNAVLKDK 199 (248)
T ss_pred hcCCCc-------ccceeeecchheeHHHHHHhhhHHHHH-HHHHhCCCceeeCChHHHHHHHhCC
Confidence 222322 234577888874322 1222222 3333332 36679999999998864
No 3
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=91.43 E-value=0.95 Score=41.79 Aligned_cols=160 Identities=14% Similarity=0.146 Sum_probs=94.8
Q ss_pred cEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCCCCC------CccccCCcceeeccCCCCCCCEEEEEec
Q 020405 54 LFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYD------EPRRNGKVPKILTHRLFPQAQYSIWIDG 127 (326)
Q Consensus 54 ~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIv~v~~~~~~------d~rrn~k~pKll~HrlFp~y~ySIWID~ 127 (326)
.+.|+.++|+.+.+..+.-..+. .. .-..-+++.++...+. ......-+.|++..++||+++--||+|+
T Consensus 30 ~~~~~il~~~is~~~~~~L~~~~-~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~ 104 (246)
T cd00505 30 PLRFHVLTNPLSDTFKAALDNLR-KL----YNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDA 104 (246)
T ss_pred CeEEEEEEccccHHHHHHHHHHH-hc----cCceEEEEeccccCcchhhhhcCccccceeHHHHHHHHhhccCeEEEEcC
Confidence 57788888886664433211111 00 0123455555422211 2233344779999999999999999999
Q ss_pred ceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHH-HHcCCCCcccCCCCCCCCCc
Q 020405 128 KMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIY-RYEGMEPWSIKKNTVSDVPE 206 (326)
Q Consensus 128 ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I~~Qm~~Y-~~eGlp~~~~~k~~~s~l~E 206 (326)
-+.+..|+..|.+--+ ++..+|+..-..- .+ .. +.| +..|++. ....+-
T Consensus 105 D~iv~~di~~L~~~~l--~~~~~aav~d~~~--~~--------~~-----------~~~~~~~~~~~-------~~~yfN 154 (246)
T cd00505 105 DILVLTDIDELWDTPL--GGQELAAAPDPGD--RR--------EG-----------KYYRQKRSHLA-------GPDYFN 154 (246)
T ss_pred CeeeccCHHHHhhccC--CCCeEEEccCchh--hh--------cc-----------chhhcccCCCC-------CCCcee
Confidence 9999999999998655 5667887753210 00 00 111 1233432 223467
Q ss_pred ccEEecccCCc-----hhhhHHHHHHHHhcCCCCCcccHHHHHHHhc
Q 020405 207 GAVIIREHTAL-----SNLFSCLWFNEVNLLTPRDQLSFGYVVYRLK 248 (326)
Q Consensus 207 ~~vIiR~H~~~-----~nlf~clWfnEv~rfs~RDQLSF~Yv~~k~~ 248 (326)
+||++=+-... .......|.+...+..--||=.++.++...+
T Consensus 155 sGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~ 201 (246)
T cd00505 155 SGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVP 201 (246)
T ss_pred eeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCC
Confidence 88888444332 1222244555556788899999999988764
No 4
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=88.44 E-value=0.6 Score=41.50 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=63.4
Q ss_pred CcceeeccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHH
Q 020405 106 KVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKI 185 (326)
Q Consensus 106 k~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I~~Qm~~ 185 (326)
-+.|++.+.+||+|+--||+|+-+.+.+|+..|.+.-+ ++..+|+... .....
T Consensus 86 ~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~--~~~~~~a~~~-------------------------~~~~~ 138 (250)
T PF01501_consen 86 TFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDL--QGKYLAAVED-------------------------ESFDN 138 (250)
T ss_dssp GGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC-----TTSSEEEEE-----------------------------HH
T ss_pred HHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccc--hhhhcccccc-------------------------chhhh
Confidence 34689999999999999999999999999999988555 3566777666 11111
Q ss_pred HHHcCCCCcccCC-CCCCCCCcccEEecccCCch-hhhHHHHHHHHhc----CCCCCcccHHHHHH
Q 020405 186 YRYEGMEPWSIKK-NTVSDVPEGAVIIREHTALS-NLFSCLWFNEVNL----LTPRDQLSFGYVVY 245 (326)
Q Consensus 186 Y~~eGlp~~~~~k-~~~s~l~E~~vIiR~H~~~~-nlf~clWfnEv~r----fs~RDQLSF~Yv~~ 245 (326)
+- .+-...+... +...+.+-+||++=+-.... ..+...+-+.++. ..-.||=.|++++.
T Consensus 139 ~~-~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~ 203 (250)
T PF01501_consen 139 FP-NKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFY 203 (250)
T ss_dssp HH-TSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHT
T ss_pred hh-hcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhcc
Confidence 11 1111111111 22456788888884433221 1222222222222 34589999999987
No 5
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=76.98 E-value=6.5 Score=35.15 Aligned_cols=90 Identities=12% Similarity=0.134 Sum_probs=62.8
Q ss_pred CCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHHHHcCCCCcccC
Q 020405 118 QAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIK 197 (326)
Q Consensus 118 ~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I~~Qm~~Y~~eGlp~~~~~ 197 (326)
+++ -+++|+-+.+..||..+++ ..+.++.++.-..... +..
T Consensus 66 G~~-vl~~D~Dvv~~~dp~~~~~----~~~~Di~~~~d~~~~~-------------------------------~~~--- 106 (212)
T PF03407_consen 66 GYD-VLFSDADVVWLRDPLPYFE----NPDADILFSSDGWDGT-------------------------------NSD--- 106 (212)
T ss_pred CCc-eEEecCCEEEecCcHHhhc----cCCCceEEecCCCccc-------------------------------chh---
Confidence 444 5689999999999998882 1456676665211100 000
Q ss_pred CCCCCCCCcccEEecccCCchhhhHHHHHHHHhcCCC-CCcccHHHHHHHhc
Q 020405 198 KNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTP-RDQLSFGYVVYRLK 248 (326)
Q Consensus 198 k~~~s~l~E~~vIiR~H~~~~nlf~clWfnEv~rfs~-RDQLSF~Yv~~k~~ 248 (326)
.....+-++++.-+.|+.+..|+..|-....+.+. .||-+|+.++....
T Consensus 107 --~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~ 156 (212)
T PF03407_consen 107 --RNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLREQA 156 (212)
T ss_pred --hcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcc
Confidence 01122356778777789898888999999999955 79999999999953
No 6
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=67.91 E-value=7.4 Score=37.12 Aligned_cols=96 Identities=14% Similarity=0.206 Sum_probs=62.1
Q ss_pred ccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCCCCC-----Cc---------------cccCC-----c
Q 020405 53 KLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYD-----EP---------------RRNGK-----V 107 (326)
Q Consensus 53 ~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIv~v~~~~~~-----d~---------------rrn~k-----~ 107 (326)
..++|.+|+|..+.+.++.-.... . ...-..+++.+++..+. .+ .+... +
T Consensus 28 ~~~~fhvvtd~~s~~~~~~~~~~~--~---~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~y 102 (257)
T cd06429 28 SNLVFHIVTDNQNYGAMRSWFDLN--P---LKIATVKVLNFDDFKLLGKVKVDSLMQLESEADTSNLKQRKPEYISLLNF 102 (257)
T ss_pred CceEEEEecCccCHHHHHHHHHhc--C---CCCceEEEEEeCcHHhhcccccchhhhhhccccccccccCCccccCHHHH
Confidence 467899999988877766532211 0 01134666666532111 01 11111 4
Q ss_pred ceeeccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecC
Q 020405 108 PKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQH 155 (326)
Q Consensus 108 pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~H 155 (326)
.+++.-.+||+.+--||+|+-+.+.+|..+|.+.=+ ++..+|+...
T Consensus 103 ~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl--~~~~~aav~d 148 (257)
T cd06429 103 ARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDL--GGGVAGAVET 148 (257)
T ss_pred HHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCC--CCCEEEEEhh
Confidence 466677889999999999999999999999988655 4666777655
No 7
>PLN02718 Probable galacturonosyltransferase
Probab=61.55 E-value=17 Score=39.12 Aligned_cols=96 Identities=10% Similarity=0.171 Sum_probs=61.0
Q ss_pred ccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCC---C--CCC-----ccccCC------cceeeccCCC
Q 020405 53 KLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHP---P--YDE-----PRRNGK------VPKILTHRLF 116 (326)
Q Consensus 53 ~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIv~v~~~---~--~~d-----~rrn~k------~pKll~HrlF 116 (326)
..++|..|+|..+...++.-.... .. .-..+.|+.+++. | |.+ +..+.+ +.+++.-.+|
T Consensus 341 ~~ivFHVvTD~is~~~mk~wf~l~--~~---~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~~~~~S~~~y~Rl~ipell 415 (603)
T PLN02718 341 EKIVFHVVTDSLNYPAISMWFLLN--PP---GKATIQILNIDDMNVLPADYNSLLMKQNSHDPRYISALNHARFYLPDIF 415 (603)
T ss_pred CcEEEEEEeCCCCHHHHHHHHHhC--CC---CCcEEEEEecchhccccccchhhhhhccccccccccHHHHHHHHHHHHh
Confidence 368999999998887776321111 01 1245667776531 1 111 111111 2355566789
Q ss_pred CCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecC
Q 020405 117 PQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQH 155 (326)
Q Consensus 117 p~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~H 155 (326)
|+.+--||+|+-+.+.+|...|.+--+ ++.-+|+...
T Consensus 416 p~l~KvLYLD~DvVV~~DL~eL~~iDl--~~~v~aaVed 452 (603)
T PLN02718 416 PGLNKIVLFDHDVVVQRDLSRLWSLDM--KGKVVGAVET 452 (603)
T ss_pred cccCEEEEEECCEEecCCHHHHhcCCC--CCcEEEEecc
Confidence 999999999999999999988887444 4556776643
No 8
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=49.22 E-value=72 Score=29.50 Aligned_cols=53 Identities=11% Similarity=0.182 Sum_probs=38.0
Q ss_pred eEEEEcCCCCCC-------CccccCCcceeeccCCCCCCCEEEEEecceEEeeCHHHHHHH
Q 020405 88 WRLILLKHPPYD-------EPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILER 141 (326)
Q Consensus 88 WrIv~v~~~~~~-------d~rrn~k~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~ 141 (326)
++++.++..... +.+-.+.+.|+..-.+ ++++--||+|+-+.+..|+..|.+.
T Consensus 53 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~kl~~~~l-~~~drvlylD~D~~v~~~i~~Lf~~ 112 (240)
T cd02537 53 WIVREVEPIDPPDSANLLKRPRFKDTYTKLRLWNL-TEYDKVVFLDADTLVLRNIDELFDL 112 (240)
T ss_pred CEEEecCccCCcchhhhccchHHHHHhHHHHhccc-cccceEEEEeCCeeEccCHHHHhCC
Confidence 567766643211 2333445778877775 5799999999999999998888763
No 9
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=47.82 E-value=21 Score=33.65 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=36.7
Q ss_pred eeeccCCCC-CCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecC
Q 020405 109 KILTHRLFP-QAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQH 155 (326)
Q Consensus 109 Kll~HrlFp-~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~H 155 (326)
.+++..+|| +++--||+|+-+-.++|..+|.+-=+ ++.-+|+..|
T Consensus 85 rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl--~~~~~Aav~d 130 (248)
T cd06432 85 ILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDL--KGAPYGYTPF 130 (248)
T ss_pred HHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCc--CCCeEEEeec
Confidence 366777898 69999999999999999988887545 4667888775
No 10
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=44.46 E-value=21 Score=34.38 Aligned_cols=98 Identities=10% Similarity=0.173 Sum_probs=60.7
Q ss_pred ccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCC--CCCC---CccccCC--cceeeccCCCC-CCCEEEE
Q 020405 53 KLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKH--PPYD---EPRRNGK--VPKILTHRLFP-QAQYSIW 124 (326)
Q Consensus 53 ~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIv~v~~--~~~~---d~rrn~k--~pKll~HrlFp-~y~ySIW 124 (326)
..++|.+++|+.+.+.++.-.... + .....+....+++ ..+. .....+. +.+++.+.+|| +++--||
T Consensus 29 ~~~~fhii~d~~s~~~~~~l~~~~-~----~~~~~i~f~~i~~~~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLY 103 (280)
T cd06431 29 NPLHFHLITDEIARRILATLFQTW-M----VPAVEVSFYNAEELKSRVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIV 103 (280)
T ss_pred CCEEEEEEECCcCHHHHHHHHHhc-c----ccCcEEEEEEhHHhhhhhccCcccchhhHHHHHHHHHHHhchhhcCEEEE
Confidence 458999999987766554422111 0 0113455566541 1111 1122222 14888999999 6999999
Q ss_pred EecceEEeeCHHHHHHHH-HhcCCCeEEEecC
Q 020405 125 IDGKMELIVDPLLILERY-LWRGKHTFAIAQH 155 (326)
Q Consensus 125 ID~ki~L~~Dp~~lle~~-l~r~~~~~Ai~~H 155 (326)
+|+-+.+.+|+.+|.+-+ -..++.-+|+..+
T Consensus 104 LD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~ 135 (280)
T cd06431 104 LDTDITFATDIAELWKIFHKFTGQQVLGLVEN 135 (280)
T ss_pred EcCCEEEcCCHHHHHHHhhhcCCCcEEEEecc
Confidence 999999999999999864 1224445666654
No 11
>PLN02742 Probable galacturonosyltransferase
Probab=43.85 E-value=41 Score=35.83 Aligned_cols=121 Identities=14% Similarity=0.163 Sum_probs=70.7
Q ss_pred CEEEEEeeecCCCCCCCCCCCCccccccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCCCCCC----c-
Q 020405 27 KFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDE----P- 101 (326)
Q Consensus 27 kiVVyTaIFG~YD~L~~P~~i~~~~~~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIv~v~~~~~~d----~- 101 (326)
+.||+|=-.++--....-.-.+...-..+-|-.+||..+...++.=-..- . ..--.|.|..+++....+ |
T Consensus 229 Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n-~----~~~a~v~V~n~e~f~wl~~~~~pv 303 (534)
T PLN02742 229 HFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMN-D----FKGVTVEVQKIEEFSWLNASYVPV 303 (534)
T ss_pred eEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhC-C----CCccEEEEEEeccccccccccchH
Confidence 57777754443333332222222222457899999999998887632110 0 112557777776521110 0
Q ss_pred ---------------------cc--cCCccee---------eccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCe
Q 020405 102 ---------------------RR--NGKVPKI---------LTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHT 149 (326)
Q Consensus 102 ---------------------rr--n~k~pKl---------l~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~ 149 (326)
.. ..|-||. +.-++||+.+--||+|+-+.+.+|...|.+-=+ ++.-
T Consensus 304 l~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL--~~~v 381 (534)
T PLN02742 304 LKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDL--HGNV 381 (534)
T ss_pred HHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCC--CCCE
Confidence 00 1122332 233689999999999999999999988887544 4666
Q ss_pred EEEec
Q 020405 150 FAIAQ 154 (326)
Q Consensus 150 ~Ai~~ 154 (326)
+|+..
T Consensus 382 iaAVe 386 (534)
T PLN02742 382 NGAVE 386 (534)
T ss_pred EEEeC
Confidence 77763
No 12
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=43.22 E-value=24 Score=34.36 Aligned_cols=46 Identities=13% Similarity=0.353 Sum_probs=37.0
Q ss_pred eeccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCC
Q 020405 110 ILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHH 158 (326)
Q Consensus 110 ll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R 158 (326)
+|.|-|=|..++.+|+|+-|. ..|-.||++++. .+.+|-+++=..|
T Consensus 134 LL~~aL~p~~swVlWlDaDIv--~~P~~lI~dli~-~~kdIivPn~~~~ 179 (269)
T PF03452_consen 134 LLSSALGPWHSWVLWLDADIV--ETPPTLIQDLIA-HDKDIIVPNCWRR 179 (269)
T ss_pred HHHhhcCCcccEEEEEecCcc--cCChHHHHHHHh-CCCCEEccceeec
Confidence 566777789999999999887 788899999985 6678887664444
No 13
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=38.06 E-value=20 Score=35.24 Aligned_cols=95 Identities=9% Similarity=0.111 Sum_probs=54.3
Q ss_pred ccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCC-----CCCCCccccCCcceeeccCCCC-CCCEEEEEe
Q 020405 53 KLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKH-----PPYDEPRRNGKVPKILTHRLFP-QAQYSIWID 126 (326)
Q Consensus 53 ~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIv~v~~-----~~~~d~rrn~k~pKll~HrlFp-~y~ySIWID 126 (326)
..++|..++|+.+.+.++.-...... -+.. =+++.++. .|-.+.-..+-+.+++.-.+|| +++--||+|
T Consensus 54 ~~~~f~Il~~~is~e~~~~l~~l~~~--~~~~---i~~~~id~~~~~~~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD 128 (334)
T PRK15171 54 KSLVFHVFTDYISDADKQRFSALAKQ--YNTR---INIYLINCERLKSLPSTKNWTYATYFRFIIADYFIDKTDKVLYLD 128 (334)
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHHh--cCCe---EEEEEeCHHHHhCCcccCcCCHHHHHHHHHHHhhhhhcCEEEEee
Confidence 35889999998776554421111100 0001 12233332 1211111122244667778898 699999999
Q ss_pred cceEEeeCHHHHHHHHHhcCCCeEEEec
Q 020405 127 GKMELIVDPLLILERYLWRGKHTFAIAQ 154 (326)
Q Consensus 127 ~ki~L~~Dp~~lle~~l~r~~~~~Ai~~ 154 (326)
+-+.+.+|...|.+-=+ ++..+|+..
T Consensus 129 ~Diiv~~dl~~L~~~dl--~~~~~aav~ 154 (334)
T PRK15171 129 ADIACKGSIKELIDLDF--AENEIAAVV 154 (334)
T ss_pred CCEEecCCHHHHHhccC--CCCeEEEEE
Confidence 99999999999887544 334466553
No 14
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=36.96 E-value=29 Score=33.00 Aligned_cols=69 Identities=12% Similarity=0.157 Sum_probs=45.2
Q ss_pred ccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHH--HHHHHHH
Q 020405 112 THRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLI--DYQMKIY 186 (326)
Q Consensus 112 ~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I--~~Qm~~Y 186 (326)
.+.++|++++-+++||-+-+ ++|...||.|+ .++.++-.+.-. -- -|+.|..-+-|-.+..+ -.+..-|
T Consensus 35 va~~L~~~~~vlflDaDigV-vNp~~~iEefi-d~~~Di~fydR~---~n-~Ei~agsYlvkNT~~~~~fl~~~a~~ 105 (222)
T PF03314_consen 35 VAKILPEYDWVLFLDADIGV-VNPNRRIEEFI-DEGYDIIFYDRF---FN-WEIAAGSYLVKNTEYSRDFLKEWADY 105 (222)
T ss_pred HHHHhccCCEEEEEcCCcee-ecCcccHHHhc-CCCCcEEEEecc---cc-hhhhhccceeeCCHHHHHHHHHHhhh
Confidence 35678999999999999977 78999999999 467777776433 22 45555333333333322 2444444
No 15
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=34.86 E-value=37 Score=30.10 Aligned_cols=51 Identities=16% Similarity=0.190 Sum_probs=37.6
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHHHHcCCCCcccCCCCCCCCCcccEEecccC
Q 020405 147 KHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHT 215 (326)
Q Consensus 147 ~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I~~Qm~~Y~~eGlp~~~~~k~~~s~l~E~~vIiR~H~ 215 (326)
+-.++-|.-|+|..+ =.|-|-+.+.|++|+-.+-+-|++| +.-+||+|+-.
T Consensus 8 GKGis~SAlPY~r~~-------PtWlK~~~ddvkeqI~K~akKGltp-----------sqIGviLRDsh 58 (151)
T KOG0400|consen 8 GKGISGSALPYRRSV-------PTWLKLTADDVKEQIYKLAKKGLTP-----------SQIGVILRDSH 58 (151)
T ss_pred CcccccCccccccCC-------cHHHhcCHHHHHHHHHHHHHcCCCh-----------hHceeeeeccc
Confidence 334666777777653 1234667899999999999999997 46689998654
No 16
>PLN00176 galactinol synthase
Probab=31.14 E-value=1e+02 Score=30.81 Aligned_cols=106 Identities=10% Similarity=0.057 Sum_probs=61.8
Q ss_pred HHhhcCCEEEEEeeecCCCCCCCCC-------CCCccccccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEc
Q 020405 21 KYVKKCKFVVASGIFDGYDVPHQPS-------NISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILL 93 (326)
Q Consensus 21 ~~m~~ckiVVyTaIFG~YD~L~~P~-------~i~~~~~~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIv~v 93 (326)
..++..+-|-+|.+.++.|-+..-. ..+ ...+.||++ ++|++.+..+.- ..-.|.|+.|
T Consensus 16 ~~~~~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~-s~~~lVvlV--t~dVp~e~r~~L-----------~~~g~~V~~V 81 (333)
T PLN00176 16 ALAKPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVK-SAYPLVVAV--LPDVPEEHRRIL-----------VSQGCIVREI 81 (333)
T ss_pred cccccCceEEEEEEecCcchHHHHHHHHHHHHHhC-CCCCEEEEE--CCCCCHHHHHHH-----------HHcCCEEEEe
Confidence 3344457888888888776554322 122 223678876 677765432210 0122466666
Q ss_pred CCC-CCCCc-cccC-----CcceeeccCCCCCCCEEEEEecceEEeeCHHHHHHH
Q 020405 94 KHP-PYDEP-RRNG-----KVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILER 141 (326)
Q Consensus 94 ~~~-~~~d~-rrn~-----k~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~ 141 (326)
+.. |-... .... -+.|++.-.| .+|+--||+|+-+.+.++...|++.
T Consensus 82 ~~i~~~~~~~~~~~~~~~i~~tKl~iw~l-~~ydkvlyLDaD~lv~~nid~Lf~~ 135 (333)
T PLN00176 82 EPVYPPENQTQFAMAYYVINYSKLRIWEF-VEYSKMIYLDGDIQVFENIDHLFDL 135 (333)
T ss_pred cccCCcccccccccchhhhhhhhhhhccc-cccceEEEecCCEEeecChHHHhcC
Confidence 532 11111 1000 1446666554 5899999999999999999988873
No 17
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=21.94 E-value=67 Score=30.19 Aligned_cols=45 Identities=16% Similarity=0.210 Sum_probs=0.0
Q ss_pred CCCCcccEEecccCCchhhhHHHHHHHHhcCCC------CCcccHHHHHHHh
Q 020405 202 SDVPEGAVIIREHTALSNLFSCLWFNEVNLLTP------RDQLSFGYVVYRL 247 (326)
Q Consensus 202 s~l~E~~vIiR~H~~~~nlf~clWfnEv~rfs~------RDQLSF~Yv~~k~ 247 (326)
.||=-|.+|||.+ +-+..|.+.|+...-+... .||=+|.+.+...
T Consensus 143 ~gLNtGsFliRns-~ws~~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~ 193 (239)
T PF05637_consen 143 NGLNTGSFLIRNS-PWSRDFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWH 193 (239)
T ss_dssp ----------------------------------------------------
T ss_pred ccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 3555677788885 5555677899976544332 4577777666543
No 18
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=20.32 E-value=92 Score=30.51 Aligned_cols=114 Identities=13% Similarity=0.141 Sum_probs=62.8
Q ss_pred CCCCCChhcHHHhhcC-CEEEEEeeecCCCCCCCCCCCCcc-----ccccEEEEEEeehhhHHHHhhcccccc-CCCCCc
Q 020405 11 GGAEMSPLDVKYVKKC-KFVVASGIFDGYDVPHQPSNISRR-----SKKLFCFLMVMDEVSLKFIRKNVTIKE-DSAGGQ 83 (326)
Q Consensus 11 ~g~~i~~~d~~~m~~c-kiVVyTaIFG~YD~L~~P~~i~~~-----~~~~vCF~mF~D~~t~~~l~~~~~~~~-d~~~~~ 83 (326)
+-||..--|..|.+++ +|.+.--.+|.|-..-+. .+.++ ..-.|=|+.|||... .+|. ......
T Consensus 18 gtf~~~~l~~~y~~~n~tIgl~vfatGkY~~f~~~-F~~SAEk~Fm~g~~v~YyVFTD~~~--------~~p~v~lg~~r 88 (271)
T cd02515 18 GTFNPDVLDEYYRKQNITIGLTVFAVGKYTEFLER-FLESAEKHFMVGYRVIYYIFTDKPA--------AVPEVELGPGR 88 (271)
T ss_pred CcCCHHHHHHHHHhcCCEEEEEEEEeccHHHHHHH-HHHHHHHhccCCCeeEEEEEeCCcc--------cCcccccCCCc
Confidence 3356556666677666 566555558999764433 11111 013477999999432 2231 110111
Q ss_pred eeeceEEEEcC-CCCCCCc--cccCCcceeeccCCCCCCCEEEEEecceEEeeCHH
Q 020405 84 WVGIWRLILLK-HPPYDEP--RRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPL 136 (326)
Q Consensus 84 ~vg~WrIv~v~-~~~~~d~--rrn~k~pKll~HrlFp~y~ySIWID~ki~L~~Dp~ 136 (326)
. =+|+.|. .....+. +|..-+-+...-+++-++||-...|+++.+..+..
T Consensus 89 ~---~~V~~v~~~~~W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig 141 (271)
T cd02515 89 R---LTVLKIAEESRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFG 141 (271)
T ss_pred e---eEEEEeccccCCcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCC
Confidence 1 2444553 3444443 33332323333356889999999999999987644
Done!