Query 020406
Match_columns 326
No_of_seqs 187 out of 2052
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 09:29:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020406.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020406hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 3E-39 6.5E-44 277.7 30.3 301 15-324 28-335 (336)
2 PRK10162 acetyl esterase; Prov 100.0 1.6E-35 3.5E-40 259.0 27.4 259 46-324 55-315 (318)
3 COG0657 Aes Esterase/lipase [L 100.0 9.1E-32 2E-36 235.7 28.2 252 52-323 57-309 (312)
4 PF07859 Abhydrolase_3: alpha/ 100.0 1E-31 2.2E-36 222.5 13.9 206 77-301 1-210 (211)
5 COG1506 DAP2 Dipeptidyl aminop 100.0 6.6E-27 1.4E-31 221.4 22.8 236 47-325 364-617 (620)
6 PF00326 Peptidase_S9: Prolyl 99.9 2.6E-24 5.7E-29 178.3 11.7 194 95-324 3-209 (213)
7 PRK10566 esterase; Provisional 99.9 3.1E-21 6.8E-26 163.8 21.0 218 58-324 11-248 (249)
8 KOG1455 Lysophospholipase [Lip 99.9 8E-21 1.7E-25 157.0 20.0 238 54-324 35-312 (313)
9 TIGR02821 fghA_ester_D S-formy 99.9 1.7E-20 3.6E-25 161.3 22.7 219 58-324 26-274 (275)
10 PHA02857 monoglyceride lipase; 99.9 1.8E-20 4E-25 161.5 22.1 236 54-325 8-274 (276)
11 PLN02298 hydrolase, alpha/beta 99.9 4.8E-20 1E-24 163.1 24.9 242 46-324 30-317 (330)
12 PRK13604 luxD acyl transferase 99.9 3.6E-20 7.8E-25 157.2 20.7 210 52-301 15-246 (307)
13 PLN02385 hydrolase; alpha/beta 99.9 4E-20 8.7E-25 164.6 22.2 249 46-325 59-346 (349)
14 PRK10115 protease 2; Provision 99.9 3.4E-20 7.4E-25 176.9 22.3 219 45-300 413-654 (686)
15 KOG4627 Kynurenine formamidase 99.9 8.4E-21 1.8E-25 147.1 12.2 207 45-304 42-251 (270)
16 PRK10749 lysophospholipase L2; 99.8 1.7E-19 3.7E-24 159.2 21.3 233 58-324 42-329 (330)
17 PLN02442 S-formylglutathione h 99.8 2.6E-19 5.7E-24 154.2 21.9 218 58-323 31-279 (283)
18 PRK05077 frsA fermentation/res 99.8 5.7E-19 1.2E-23 159.5 20.5 233 48-324 168-412 (414)
19 COG2267 PldB Lysophospholipase 99.8 3.9E-19 8.4E-24 153.5 18.3 236 58-325 21-295 (298)
20 PLN02652 hydrolase; alpha/beta 99.8 1.1E-18 2.4E-23 156.3 21.7 231 57-324 121-387 (395)
21 PF01738 DLH: Dienelactone hyd 99.8 2.3E-19 4.9E-24 149.2 15.0 194 59-324 1-217 (218)
22 KOG2281 Dipeptidyl aminopeptid 99.8 7E-19 1.5E-23 157.2 17.9 231 51-323 618-866 (867)
23 PF10340 DUF2424: Protein of u 99.8 4.3E-18 9.2E-23 147.4 22.2 225 58-302 105-352 (374)
24 PRK00870 haloalkane dehalogena 99.8 4.3E-18 9.4E-23 148.7 21.3 243 47-324 20-301 (302)
25 KOG2100 Dipeptidyl aminopeptid 99.8 3.1E-18 6.8E-23 164.0 20.7 236 45-324 497-747 (755)
26 KOG4391 Predicted alpha/beta h 99.8 7.1E-19 1.5E-23 137.7 13.2 237 34-324 40-282 (300)
27 COG0412 Dienelactone hydrolase 99.8 1.3E-17 2.8E-22 139.0 21.8 203 49-324 3-233 (236)
28 COG1647 Esterase/lipase [Gener 99.8 5.4E-19 1.2E-23 139.3 11.1 212 75-323 16-243 (243)
29 PRK11460 putative hydrolase; P 99.8 1.8E-17 3.8E-22 138.7 19.9 159 72-301 14-194 (232)
30 KOG1552 Predicted alpha/beta h 99.8 7.2E-18 1.6E-22 136.9 15.7 211 45-322 34-250 (258)
31 PLN02824 hydrolase, alpha/beta 99.8 1.8E-17 3.9E-22 144.3 18.3 99 74-200 29-137 (294)
32 TIGR01840 esterase_phb esteras 99.8 2.2E-17 4.7E-22 136.6 16.8 181 62-284 2-197 (212)
33 PLN00021 chlorophyllase 99.8 1.8E-16 3.9E-21 137.5 23.1 131 58-202 38-168 (313)
34 TIGR03343 biphenyl_bphD 2-hydr 99.8 3.3E-17 7.1E-22 141.6 18.5 212 73-322 29-281 (282)
35 PRK10673 acyl-CoA esterase; Pr 99.8 2.8E-17 6.1E-22 139.9 17.3 214 71-324 13-255 (255)
36 PF12695 Abhydrolase_5: Alpha/ 99.8 2E-17 4.3E-22 128.3 14.8 143 76-299 1-145 (145)
37 TIGR03100 hydr1_PEP hydrolase, 99.8 5.1E-17 1.1E-21 139.6 18.5 240 49-322 3-273 (274)
38 COG2272 PnbA Carboxylesterase 99.8 6.6E-18 1.4E-22 148.8 13.1 174 11-201 3-218 (491)
39 PF02230 Abhydrolase_2: Phosph 99.8 7.5E-17 1.6E-21 133.7 17.9 113 153-324 101-215 (216)
40 TIGR02240 PHA_depoly_arom poly 99.8 1.9E-17 4.1E-22 142.8 14.0 213 74-325 25-267 (276)
41 PLN02965 Probable pheophorbida 99.7 1.2E-16 2.7E-21 136.0 17.7 209 76-324 5-253 (255)
42 TIGR03611 RutD pyrimidine util 99.7 1.7E-16 3.7E-21 134.7 17.8 214 72-323 11-257 (257)
43 cd00312 Esterase_lipase Estera 99.7 4.9E-17 1.1E-21 151.5 14.8 172 12-201 1-214 (493)
44 TIGR01250 pro_imino_pep_2 prol 99.7 3.3E-16 7.1E-21 135.1 18.3 103 72-200 23-131 (288)
45 PRK10985 putative hydrolase; P 99.7 3.2E-16 6.9E-21 138.1 17.5 133 45-202 30-170 (324)
46 COG0400 Predicted esterase [Ge 99.7 5.8E-16 1.2E-20 125.2 17.3 176 71-324 15-205 (207)
47 TIGR03695 menH_SHCHC 2-succiny 99.7 3.7E-16 8.1E-21 131.5 17.1 100 74-201 1-106 (251)
48 KOG4409 Predicted hydrolase/ac 99.7 1.7E-16 3.7E-21 133.9 14.3 242 48-323 67-363 (365)
49 TIGR03056 bchO_mg_che_rel puta 99.7 5.9E-16 1.3E-20 133.3 18.3 101 73-201 27-131 (278)
50 PLN02894 hydrolase, alpha/beta 99.7 1.4E-15 3.1E-20 137.3 20.7 104 72-200 103-211 (402)
51 PLN02511 hydrolase 99.7 9.1E-16 2E-20 138.0 19.1 132 45-202 70-212 (388)
52 PRK03592 haloalkane dehalogena 99.7 5.9E-16 1.3E-20 134.7 17.2 100 73-200 26-128 (295)
53 PLN02679 hydrolase, alpha/beta 99.7 2.3E-16 5E-21 140.8 14.9 218 74-325 88-358 (360)
54 TIGR01836 PHA_synth_III_C poly 99.7 4.1E-15 8.8E-20 132.5 22.2 131 46-203 36-174 (350)
55 PF00135 COesterase: Carboxyle 99.7 8.7E-17 1.9E-21 151.5 12.0 176 9-200 22-245 (535)
56 PRK03204 haloalkane dehalogena 99.7 5.3E-16 1.2E-20 134.3 15.8 100 73-200 33-136 (286)
57 PRK06489 hypothetical protein; 99.7 5.5E-16 1.2E-20 138.6 16.2 135 37-199 25-188 (360)
58 KOG4178 Soluble epoxide hydrol 99.7 8E-15 1.7E-19 123.5 21.6 118 46-200 22-148 (322)
59 PLN03087 BODYGUARD 1 domain co 99.7 1.6E-15 3.4E-20 138.1 17.9 102 73-200 200-309 (481)
60 TIGR01607 PST-A Plasmodium sub 99.7 2.7E-15 5.8E-20 132.4 18.7 249 58-322 9-331 (332)
61 TIGR02427 protocat_pcaD 3-oxoa 99.7 1.6E-16 3.5E-21 134.0 10.3 100 73-200 12-114 (251)
62 PRK11071 esterase YqiA; Provis 99.7 1.9E-15 4.2E-20 122.3 15.8 177 75-322 2-189 (190)
63 PRK11126 2-succinyl-6-hydroxy- 99.7 2.5E-15 5.4E-20 126.9 16.4 100 74-200 2-102 (242)
64 PRK07581 hypothetical protein; 99.7 7E-16 1.5E-20 136.9 12.2 129 45-200 9-159 (339)
65 PRK14875 acetoin dehydrogenase 99.7 2.8E-15 6.2E-20 134.7 15.6 101 72-200 129-232 (371)
66 PLN02211 methyl indole-3-aceta 99.7 2.9E-14 6.2E-19 122.5 21.0 102 72-200 16-122 (273)
67 PF05448 AXE1: Acetyl xylan es 99.7 3.1E-16 6.8E-21 136.2 8.5 235 44-324 52-320 (320)
68 TIGR03101 hydr2_PEP hydrolase, 99.6 5.1E-14 1.1E-18 119.1 20.9 226 53-320 5-264 (266)
69 TIGR01738 bioH putative pimelo 99.6 4.2E-15 9.1E-20 124.9 14.2 96 75-200 5-100 (245)
70 PRK10349 carboxylesterase BioH 99.6 4.2E-15 9.1E-20 126.7 14.0 95 75-199 14-108 (256)
71 PLN02578 hydrolase 99.6 1.4E-14 3E-19 129.2 17.4 98 73-199 85-186 (354)
72 PF10503 Esterase_phd: Esteras 99.6 9.5E-15 2.1E-19 119.4 14.6 121 59-201 1-133 (220)
73 TIGR01249 pro_imino_pep_1 prol 99.6 2E-14 4.2E-19 125.8 17.6 99 74-200 27-130 (306)
74 KOG1454 Predicted hydrolase/ac 99.6 1.8E-14 4E-19 125.7 16.2 220 72-326 56-326 (326)
75 PLN03084 alpha/beta hydrolase 99.6 2.4E-14 5.2E-19 127.8 17.1 100 73-200 126-232 (383)
76 PF12697 Abhydrolase_6: Alpha/ 99.6 1.4E-15 3.1E-20 126.1 8.3 97 77-201 1-102 (228)
77 COG4099 Predicted peptidase [G 99.6 3.9E-15 8.4E-20 122.3 10.4 196 55-325 170-386 (387)
78 KOG4388 Hormone-sensitive lipa 99.6 1.5E-14 3.3E-19 128.4 14.5 112 73-198 395-506 (880)
79 PLN02980 2-oxoglutarate decarb 99.6 5.3E-14 1.1E-18 146.0 20.2 244 47-325 1345-1640(1655)
80 PF12740 Chlorophyllase2: Chlo 99.6 7.4E-14 1.6E-18 115.6 16.7 129 59-201 4-132 (259)
81 COG2945 Predicted hydrolase of 99.6 9.8E-14 2.1E-18 107.4 16.2 196 48-322 4-205 (210)
82 COG0429 Predicted hydrolase of 99.6 9.4E-14 2E-18 116.9 17.1 115 44-177 47-168 (345)
83 PRK00175 metX homoserine O-ace 99.6 1.5E-13 3.2E-18 123.6 19.7 64 257-325 309-375 (379)
84 TIGR01392 homoserO_Ac_trn homo 99.6 1.3E-13 2.8E-18 122.9 18.3 61 257-322 288-351 (351)
85 PRK08775 homoserine O-acetyltr 99.6 2E-14 4.3E-19 127.8 12.9 61 257-325 277-340 (343)
86 PRK10439 enterobactin/ferric e 99.6 1.3E-12 2.8E-17 117.6 23.6 192 58-303 193-395 (411)
87 KOG1838 Alpha/beta hydrolase [ 99.5 5.4E-13 1.2E-17 116.3 17.9 138 41-200 88-236 (409)
88 COG3458 Acetyl esterase (deace 99.5 1.3E-13 2.9E-18 112.1 11.1 217 45-301 53-302 (321)
89 PRK05371 x-prolyl-dipeptidyl a 99.5 5.4E-12 1.2E-16 121.8 22.9 200 100-323 273-518 (767)
90 TIGR00976 /NonD putative hydro 99.5 1.9E-12 4.1E-17 122.0 19.2 125 55-203 5-135 (550)
91 PLN02872 triacylglycerol lipas 99.5 1.1E-12 2.5E-17 117.3 16.8 135 46-201 44-198 (395)
92 PF06500 DUF1100: Alpha/beta h 99.5 4.8E-13 1E-17 117.5 13.6 234 45-324 164-409 (411)
93 KOG4667 Predicted esterase [Li 99.5 2.3E-12 4.9E-17 101.4 13.5 206 72-322 31-256 (269)
94 KOG2382 Predicted alpha/beta h 99.4 9.7E-12 2.1E-16 105.1 16.5 229 59-324 38-313 (315)
95 KOG2984 Predicted hydrolase [G 99.4 1.5E-12 3.2E-17 101.4 10.3 209 75-324 43-276 (277)
96 PF08840 BAAT_C: BAAT / Acyl-C 99.4 6.8E-13 1.5E-17 109.2 8.4 175 127-324 3-210 (213)
97 KOG2564 Predicted acetyltransf 99.4 3.2E-12 6.8E-17 104.6 10.7 121 49-197 51-179 (343)
98 COG3509 LpqC Poly(3-hydroxybut 99.4 5.1E-11 1.1E-15 98.8 17.1 120 58-200 46-179 (312)
99 PF03403 PAF-AH_p_II: Platelet 99.4 1.4E-11 3.1E-16 109.7 14.8 192 72-324 98-358 (379)
100 KOG3101 Esterase D [General fu 99.4 4.7E-12 1E-16 99.2 10.0 218 58-306 27-268 (283)
101 PRK06765 homoserine O-acetyltr 99.4 1.7E-11 3.7E-16 109.8 15.0 63 257-324 323-388 (389)
102 PF12715 Abhydrolase_7: Abhydr 99.4 6E-12 1.3E-16 108.8 11.4 131 46-198 86-258 (390)
103 COG1505 Serine proteases of th 99.4 2.9E-11 6.4E-16 108.8 15.8 229 52-323 400-645 (648)
104 PF02129 Peptidase_S15: X-Pro 99.4 5.5E-12 1.2E-16 108.4 10.9 126 56-204 2-140 (272)
105 PRK07868 acyl-CoA synthetase; 99.3 7E-11 1.5E-15 118.7 19.8 126 49-202 40-179 (994)
106 KOG2112 Lysophospholipase [Lip 99.3 1.1E-10 2.4E-15 92.3 16.1 178 74-323 3-203 (206)
107 PF05728 UPF0227: Uncharacteri 99.3 2.9E-11 6.2E-16 96.7 13.0 129 157-322 59-187 (187)
108 PF00756 Esterase: Putative es 99.3 4.6E-12 1E-16 107.6 8.7 124 57-203 6-153 (251)
109 KOG3043 Predicted hydrolase re 99.3 1.9E-11 4.1E-16 97.1 11.3 161 95-325 56-241 (242)
110 KOG1516 Carboxylesterase and r 99.3 4.4E-11 9.6E-16 113.0 14.5 174 11-199 16-231 (545)
111 PRK05855 short chain dehydroge 99.3 2.3E-11 5.1E-16 115.9 12.5 86 73-177 24-114 (582)
112 PF07224 Chlorophyllase: Chlor 99.3 1.6E-11 3.5E-16 99.8 9.5 128 58-202 32-159 (307)
113 TIGR01838 PHA_synth_I poly(R)- 99.3 3.7E-10 7.9E-15 104.3 19.5 130 49-203 165-305 (532)
114 cd00707 Pancreat_lipase_like P 99.3 5.8E-11 1.2E-15 101.8 11.4 107 72-201 34-148 (275)
115 COG3571 Predicted hydrolase of 99.2 2E-09 4.4E-14 81.0 17.1 183 73-323 13-210 (213)
116 PF08538 DUF1749: Protein of u 99.2 7.2E-11 1.6E-15 99.8 10.6 118 73-205 32-153 (303)
117 KOG4389 Acetylcholinesterase/B 99.2 1.3E-10 2.7E-15 102.2 11.3 176 11-203 32-258 (601)
118 KOG3847 Phospholipase A2 (plat 99.2 1E-09 2.2E-14 91.4 15.9 193 71-324 115-371 (399)
119 KOG2237 Predicted serine prote 99.2 5.8E-10 1.3E-14 101.2 14.5 220 49-300 442-684 (712)
120 COG1770 PtrB Protease II [Amin 99.2 2.2E-09 4.8E-14 98.1 17.9 217 44-301 415-658 (682)
121 TIGR03230 lipo_lipase lipoprot 99.2 4.8E-10 1E-14 100.7 12.9 107 72-200 39-154 (442)
122 COG0627 Predicted esterase [Ge 99.2 2.6E-10 5.6E-15 98.4 10.4 233 61-322 37-309 (316)
123 COG2382 Fes Enterochelin ester 99.2 1.9E-09 4.1E-14 90.2 15.1 195 58-304 81-285 (299)
124 COG4188 Predicted dienelactone 99.1 7.3E-10 1.6E-14 95.4 12.4 120 48-177 38-179 (365)
125 PF06821 Ser_hydrolase: Serine 99.1 6.9E-09 1.5E-13 82.1 15.4 151 77-301 1-154 (171)
126 COG3208 GrsT Predicted thioest 99.1 5.5E-09 1.2E-13 84.9 14.2 87 95-197 23-109 (244)
127 PF03583 LIP: Secretory lipase 99.0 2.6E-08 5.6E-13 86.0 17.0 44 258-301 220-266 (290)
128 COG0596 MhpC Predicted hydrola 99.0 1.1E-07 2.4E-12 79.9 19.3 102 74-201 21-124 (282)
129 COG2936 Predicted acyl esteras 98.9 4.9E-08 1.1E-12 89.3 16.2 134 46-202 17-161 (563)
130 PF06057 VirJ: Bacterial virul 98.9 2.5E-08 5.5E-13 78.5 11.8 182 76-323 4-191 (192)
131 TIGR01839 PHA_synth_II poly(R) 98.8 5.8E-07 1.3E-11 82.7 20.0 131 47-203 190-331 (560)
132 PF09752 DUF2048: Uncharacteri 98.8 5.7E-07 1.2E-11 77.6 18.6 113 59-198 77-208 (348)
133 PF06028 DUF915: Alpha/beta hy 98.8 6.5E-07 1.4E-11 75.2 18.0 152 126-322 85-253 (255)
134 PF03959 FSH1: Serine hydrolas 98.8 5.5E-08 1.2E-12 80.2 10.4 119 127-301 83-203 (212)
135 TIGR03502 lipase_Pla1_cef extr 98.8 5.6E-08 1.2E-12 93.0 10.9 93 72-177 447-575 (792)
136 PRK04940 hypothetical protein; 98.8 6.9E-07 1.5E-11 70.2 14.9 119 157-323 60-179 (180)
137 TIGR01849 PHB_depoly_PhaZ poly 98.7 8.3E-07 1.8E-11 79.2 16.9 67 256-324 337-406 (406)
138 PF00151 Lipase: Lipase; Inte 98.7 4.9E-08 1.1E-12 85.5 8.9 111 71-200 68-187 (331)
139 COG2819 Predicted hydrolase of 98.7 1.2E-06 2.6E-11 72.7 16.3 120 152-323 132-260 (264)
140 PF06342 DUF1057: Alpha/beta h 98.7 4.8E-07 1E-11 75.3 13.5 125 47-199 5-136 (297)
141 PF10230 DUF2305: Uncharacteri 98.7 3.2E-07 6.9E-12 78.3 11.8 111 74-202 2-124 (266)
142 PF02273 Acyl_transf_2: Acyl t 98.6 5.9E-07 1.3E-11 72.8 11.2 208 51-301 7-239 (294)
143 PF00561 Abhydrolase_1: alpha/ 98.6 2.8E-07 6E-12 76.6 9.2 71 108-199 1-78 (230)
144 COG3545 Predicted esterase of 98.5 6.7E-06 1.5E-10 63.6 14.6 117 157-322 59-177 (181)
145 KOG2551 Phospholipase/carboxyh 98.5 3.2E-06 7E-11 67.7 13.1 113 132-301 90-204 (230)
146 PF07819 PGAP1: PGAP1-like pro 98.5 1.5E-06 3.2E-11 72.2 10.6 110 73-200 3-123 (225)
147 PF05677 DUF818: Chlamydia CHL 98.5 2.9E-06 6.2E-11 72.6 11.8 119 48-177 112-235 (365)
148 COG4814 Uncharacterized protei 98.5 2.6E-05 5.6E-10 63.8 16.5 151 130-323 122-286 (288)
149 KOG2624 Triglyceride lipase-ch 98.4 1.3E-05 2.8E-10 71.6 15.3 133 48-203 48-202 (403)
150 COG4757 Predicted alpha/beta h 98.4 1.5E-06 3.3E-11 69.8 8.3 105 51-177 10-125 (281)
151 PF00975 Thioesterase: Thioest 98.4 2.6E-06 5.6E-11 71.2 9.8 101 75-199 1-103 (229)
152 PF11144 DUF2920: Protein of u 98.3 4.9E-05 1.1E-09 67.0 16.5 152 127-295 163-333 (403)
153 PF12146 Hydrolase_4: Putative 98.3 2E-06 4.3E-11 58.7 6.0 56 58-122 3-58 (79)
154 PF12048 DUF3530: Protein of u 98.3 8E-05 1.7E-09 64.9 17.2 202 51-324 65-309 (310)
155 PF05577 Peptidase_S28: Serine 98.3 5.1E-06 1.1E-10 76.4 9.8 122 58-200 13-148 (434)
156 KOG3253 Predicted alpha/beta h 98.3 1.5E-05 3.2E-10 72.6 12.0 171 73-304 175-350 (784)
157 COG2021 MET2 Homoserine acetyl 98.2 2.4E-05 5.2E-10 67.8 12.6 131 43-199 17-181 (368)
158 PF10142 PhoPQ_related: PhoPQ- 98.2 1.9E-05 4.2E-10 69.6 12.0 211 60-322 51-318 (367)
159 PF05705 DUF829: Eukaryotic pr 98.2 2.3E-05 4.9E-10 66.1 12.0 60 258-321 179-240 (240)
160 COG3150 Predicted esterase [Ge 98.2 5E-05 1.1E-09 58.1 12.0 123 157-323 59-188 (191)
161 PF01674 Lipase_2: Lipase (cla 98.1 1.1E-05 2.5E-10 66.1 7.8 82 77-177 4-95 (219)
162 PF05990 DUF900: Alpha/beta hy 98.0 3.2E-05 6.9E-10 64.6 8.7 111 72-202 16-139 (233)
163 COG3243 PhaC Poly(3-hydroxyalk 98.0 0.00067 1.4E-08 60.0 16.4 85 97-203 130-220 (445)
164 COG4782 Uncharacterized protei 98.0 3.8E-05 8.2E-10 66.3 8.2 113 72-202 114-236 (377)
165 PF07082 DUF1350: Protein of u 97.9 0.0042 9.1E-08 51.4 19.4 177 76-301 18-206 (250)
166 PF03096 Ndr: Ndr family; Int 97.9 0.00024 5.1E-09 60.1 12.5 220 58-323 10-278 (283)
167 PF11339 DUF3141: Protein of u 97.9 0.0033 7.1E-08 57.1 20.2 111 61-196 54-171 (581)
168 KOG2931 Differentiation-relate 97.8 0.0038 8.2E-08 52.6 17.5 223 58-323 33-305 (326)
169 COG1073 Hydrolases of the alph 97.8 0.00035 7.6E-09 60.3 12.0 63 258-324 233-297 (299)
170 KOG4840 Predicted hydrolases o 97.8 0.0017 3.6E-08 52.3 14.3 90 95-203 54-147 (299)
171 KOG3975 Uncharacterized conser 97.8 0.0041 9E-08 51.1 16.6 105 71-198 26-145 (301)
172 PLN02733 phosphatidylcholine-s 97.7 0.00014 3.1E-09 66.2 8.2 90 95-203 110-204 (440)
173 COG3319 Thioesterase domains o 97.6 0.00048 1E-08 57.9 9.1 102 75-201 1-104 (257)
174 KOG2183 Prolylcarboxypeptidase 97.6 0.00039 8.5E-09 61.0 8.4 86 96-200 100-203 (492)
175 KOG1553 Predicted alpha/beta h 97.6 0.00046 1E-08 59.1 8.6 79 105-203 266-348 (517)
176 PTZ00472 serine carboxypeptida 97.6 0.0017 3.8E-08 59.9 13.1 133 58-205 62-221 (462)
177 COG4947 Uncharacterized protei 97.4 0.00039 8.4E-09 53.5 6.0 112 157-301 101-217 (227)
178 PF02450 LCAT: Lecithin:choles 97.4 0.00084 1.8E-08 60.7 8.2 90 95-202 67-162 (389)
179 PF05057 DUF676: Putative seri 97.3 0.00095 2E-08 55.2 7.0 21 157-177 78-98 (217)
180 COG1075 LipA Predicted acetylt 97.2 0.0013 2.9E-08 58.1 7.7 103 75-203 60-167 (336)
181 KOG3724 Negative regulator of 97.2 0.0018 3.9E-08 61.4 8.5 66 108-177 133-202 (973)
182 KOG3967 Uncharacterized conser 97.1 0.01 2.2E-07 47.6 10.9 92 72-177 99-210 (297)
183 PF01083 Cutinase: Cutinase; 97.1 0.0041 8.9E-08 49.7 8.9 104 77-197 8-119 (179)
184 PRK10252 entF enterobactin syn 97.1 0.0033 7.2E-08 66.0 10.5 102 73-199 1067-1170(1296)
185 TIGR03712 acc_sec_asp2 accesso 97.1 0.1 2.2E-06 47.5 17.7 109 73-207 288-397 (511)
186 KOG2182 Hydrolytic enzymes of 97.0 0.008 1.7E-07 54.4 10.8 119 63-200 75-207 (514)
187 PF00450 Peptidase_S10: Serine 97.0 0.015 3.3E-07 53.1 12.6 68 128-202 114-183 (415)
188 PF11288 DUF3089: Protein of u 97.0 0.0038 8.2E-08 50.5 7.5 58 108-177 46-115 (207)
189 PF11187 DUF2974: Protein of u 96.7 0.004 8.7E-08 51.5 5.7 53 131-198 69-121 (224)
190 COG3946 VirJ Type IV secretory 96.6 0.015 3.3E-07 51.2 8.9 64 97-174 278-343 (456)
191 PF01764 Lipase_3: Lipase (cla 96.6 0.015 3.3E-07 44.2 8.0 21 157-177 64-84 (140)
192 PF08386 Abhydrolase_4: TAP-li 96.6 0.0067 1.5E-07 43.6 5.6 58 257-323 34-93 (103)
193 cd00741 Lipase Lipase. Lipase 96.6 0.0073 1.6E-07 46.9 6.2 40 156-199 27-66 (153)
194 PLN02209 serine carboxypeptida 96.4 0.11 2.3E-06 47.8 13.3 60 259-324 353-435 (437)
195 PLN03016 sinapoylglucose-malat 96.1 0.14 3E-06 47.0 12.5 60 259-324 349-431 (433)
196 PLN02606 palmitoyl-protein thi 96.1 0.035 7.6E-07 47.6 8.0 38 157-202 95-134 (306)
197 KOG1282 Serine carboxypeptidas 95.9 0.17 3.7E-06 46.4 12.0 49 156-205 167-218 (454)
198 cd00519 Lipase_3 Lipase (class 95.9 0.022 4.9E-07 47.5 6.1 41 157-200 128-168 (229)
199 PF07519 Tannase: Tannase and 95.8 0.13 2.8E-06 47.9 11.3 120 58-201 16-151 (474)
200 PF02089 Palm_thioest: Palmito 95.8 0.074 1.6E-06 45.2 8.8 37 157-200 80-116 (279)
201 KOG2541 Palmitoyl protein thio 95.4 0.21 4.6E-06 41.8 9.7 103 74-199 24-127 (296)
202 PLN02633 palmitoyl protein thi 95.3 0.24 5.2E-06 42.7 10.4 37 157-201 94-132 (314)
203 PLN02517 phosphatidylcholine-s 95.3 0.057 1.2E-06 50.5 6.9 92 95-202 158-265 (642)
204 PLN02454 triacylglycerol lipas 95.1 0.083 1.8E-06 47.5 7.3 20 158-177 229-248 (414)
205 smart00824 PKS_TE Thioesterase 95.1 0.11 2.3E-06 42.1 7.7 84 95-198 15-100 (212)
206 PLN00413 triacylglycerol lipas 94.8 0.088 1.9E-06 47.9 6.6 21 157-177 284-304 (479)
207 PF03283 PAE: Pectinacetyleste 94.1 0.2 4.3E-06 44.8 7.2 41 126-177 136-176 (361)
208 KOG2521 Uncharacterized conser 93.9 4.3 9.4E-05 35.9 16.4 62 259-324 227-290 (350)
209 PLN02162 triacylglycerol lipas 93.9 0.22 4.8E-06 45.3 7.1 21 157-177 278-298 (475)
210 KOG2369 Lecithin:cholesterol a 93.4 0.2 4.3E-06 45.4 5.9 69 95-177 126-202 (473)
211 KOG2565 Predicted hydrolases o 93.3 0.47 1E-05 41.8 7.8 116 57-198 132-262 (469)
212 PLN02934 triacylglycerol lipas 93.2 0.17 3.6E-06 46.6 5.2 21 157-177 321-341 (515)
213 COG4287 PqaA PhoPQ-activated p 92.9 2.7 5.9E-05 37.1 11.8 40 259-301 331-372 (507)
214 PLN02408 phospholipase A1 92.8 0.34 7.3E-06 43.0 6.4 21 157-177 200-220 (365)
215 PF00561 Abhydrolase_1: alpha/ 92.8 0.12 2.6E-06 42.4 3.6 42 257-302 175-218 (230)
216 PLN02571 triacylglycerol lipas 92.5 0.24 5.1E-06 44.7 5.1 20 158-177 227-246 (413)
217 PLN02310 triacylglycerol lipas 92.1 0.19 4.2E-06 45.1 4.1 21 157-177 209-229 (405)
218 PLN02324 triacylglycerol lipas 92.0 0.3 6.4E-06 44.0 5.1 21 157-177 215-235 (415)
219 COG2939 Carboxypeptidase C (ca 91.8 1.9 4E-05 39.8 9.9 64 125-201 174-237 (498)
220 PF08237 PE-PPE: PE-PPE domain 91.7 2.3 4.9E-05 35.4 9.7 42 155-198 46-88 (225)
221 KOG4569 Predicted lipase [Lipi 91.7 0.51 1.1E-05 41.9 6.2 37 128-177 155-191 (336)
222 PLN02802 triacylglycerol lipas 91.5 0.55 1.2E-05 43.3 6.3 21 157-177 330-350 (509)
223 PLN03037 lipase class 3 family 91.4 0.24 5.2E-06 45.7 3.9 21 157-177 318-338 (525)
224 KOG4540 Putative lipase essent 90.8 0.49 1.1E-05 40.0 4.9 21 157-177 276-296 (425)
225 COG5153 CVT17 Putative lipase 90.8 0.49 1.1E-05 40.0 4.9 21 157-177 276-296 (425)
226 PLN02753 triacylglycerol lipas 90.6 0.47 1E-05 43.9 5.0 21 157-177 312-332 (531)
227 PLN02847 triacylglycerol lipas 90.5 0.46 1E-05 44.6 4.9 21 157-177 251-271 (633)
228 PLN02719 triacylglycerol lipas 90.4 0.49 1.1E-05 43.7 4.9 21 157-177 298-318 (518)
229 PLN02761 lipase class 3 family 90.0 0.59 1.3E-05 43.3 5.1 21 157-177 294-314 (527)
230 KOG1551 Uncharacterized conser 89.2 1.5 3.2E-05 36.9 6.4 22 156-177 194-215 (371)
231 PF04301 DUF452: Protein of un 89.1 2 4.4E-05 35.2 7.2 33 157-199 57-89 (213)
232 PF06259 Abhydrolase_8: Alpha/ 89.1 1.4 3.1E-05 35.0 6.1 38 155-200 107-145 (177)
233 PF03991 Prion_octapep: Copper 87.7 0.22 4.7E-06 17.8 0.3 6 81-86 2-7 (8)
234 PF07519 Tannase: Tannase and 87.3 0.87 1.9E-05 42.4 4.5 62 259-323 355-426 (474)
235 PLN02213 sinapoylglucose-malat 87.0 3.8 8.3E-05 36.0 8.2 50 154-203 48-99 (319)
236 PF10605 3HBOH: 3HB-oligomer h 86.6 2.8 6.1E-05 39.5 7.2 67 257-324 555-637 (690)
237 PF04083 Abhydro_lipase: Parti 85.4 2.4 5.3E-05 27.2 4.5 36 48-83 12-52 (63)
238 COG3673 Uncharacterized conser 85.2 19 0.0004 31.5 10.8 39 127-177 104-142 (423)
239 PF09994 DUF2235: Uncharacteri 81.2 2.7 5.9E-05 36.1 4.6 39 127-177 74-112 (277)
240 PF06850 PHB_depo_C: PHB de-po 78.5 4.9 0.00011 32.3 4.8 66 257-324 134-202 (202)
241 KOG1283 Serine carboxypeptidas 78.2 35 0.00076 29.9 10.0 141 52-202 9-168 (414)
242 KOG2029 Uncharacterized conser 77.8 9.6 0.00021 36.0 7.1 24 154-177 523-546 (697)
243 PF05277 DUF726: Protein of un 76.3 14 0.00031 32.8 7.6 43 155-200 218-260 (345)
244 PF12242 Eno-Rase_NADH_b: NAD( 75.8 11 0.00024 25.2 5.1 42 126-177 19-60 (78)
245 COG4553 DepA Poly-beta-hydroxy 75.5 53 0.0011 28.4 10.2 66 258-325 340-408 (415)
246 PF10081 Abhydrolase_9: Alpha/ 72.8 27 0.00059 29.9 8.0 90 98-200 53-147 (289)
247 PF05576 Peptidase_S37: PS-10 71.5 6.9 0.00015 35.3 4.5 60 258-321 352-411 (448)
248 PF12122 DUF3582: Protein of u 62.8 27 0.00059 24.8 5.3 49 273-323 12-60 (101)
249 PF10686 DUF2493: Protein of u 62.4 15 0.00032 24.2 3.7 35 72-113 29-63 (71)
250 PF06500 DUF1100: Alpha/beta h 61.7 7.8 0.00017 35.2 2.9 63 259-323 191-254 (411)
251 COG4635 HemG Flavodoxin [Energ 60.8 27 0.00058 27.1 5.2 67 259-325 2-74 (175)
252 KOG1202 Animal-type fatty acid 55.7 71 0.0015 33.6 8.4 96 72-199 2121-2218(2376)
253 PTZ00472 serine carboxypeptida 51.9 39 0.00085 31.5 6.0 61 259-324 366-459 (462)
254 PF05576 Peptidase_S37: PS-10 51.9 22 0.00048 32.2 4.1 97 72-198 61-167 (448)
255 cd07224 Pat_like Patatin-like 47.8 23 0.0005 29.5 3.5 24 154-177 26-49 (233)
256 COG4425 Predicted membrane pro 47.6 53 0.0011 30.2 5.7 81 76-173 324-413 (588)
257 COG0431 Predicted flavoprotein 44.4 75 0.0016 25.3 5.8 64 95-177 58-121 (184)
258 PF05577 Peptidase_S28: Serine 44.0 26 0.00056 32.3 3.5 51 257-312 376-426 (434)
259 PF00450 Peptidase_S10: Serine 41.6 20 0.00044 32.5 2.5 60 258-322 331-414 (415)
260 cd07205 Pat_PNPLA6_PNPLA7_NTE1 39.8 38 0.00083 26.6 3.5 18 160-177 31-48 (175)
261 TIGR02240 PHA_depoly_arom poly 39.8 1.1E+02 0.0025 25.7 6.7 62 257-322 25-86 (276)
262 PLN02213 sinapoylglucose-malat 39.6 72 0.0016 28.1 5.4 60 259-324 235-317 (319)
263 TIGR02690 resist_ArsH arsenica 38.7 86 0.0019 25.9 5.4 14 156-170 128-141 (219)
264 PLN02209 serine carboxypeptida 36.3 97 0.0021 28.7 5.9 69 128-203 145-215 (437)
265 PF14253 AbiH: Bacteriophage a 36.1 21 0.00045 30.4 1.5 15 155-169 233-247 (270)
266 cd07210 Pat_hypo_W_succinogene 35.9 48 0.001 27.4 3.5 18 160-177 31-48 (221)
267 PRK05282 (alpha)-aspartyl dipe 34.5 1.2E+02 0.0026 25.4 5.7 18 158-175 113-130 (233)
268 PLN03016 sinapoylglucose-malat 34.4 1E+02 0.0022 28.6 5.7 46 156-203 164-213 (433)
269 KOG1282 Serine carboxypeptidas 34.3 1.2E+02 0.0026 28.2 6.1 61 259-324 365-448 (454)
270 cd07230 Pat_TGL4-5_like Triacy 34.3 48 0.001 30.5 3.5 22 154-177 100-121 (421)
271 COG4822 CbiK Cobalamin biosynt 33.0 2.8E+02 0.0061 22.9 8.3 34 258-291 199-235 (265)
272 PRK05077 frsA fermentation/res 32.9 1.9E+02 0.0041 26.6 7.2 65 258-324 194-259 (414)
273 cd07212 Pat_PNPLA9 Patatin-lik 32.8 34 0.00074 30.0 2.3 17 160-176 35-51 (312)
274 cd07218 Pat_iPLA2 Calcium-inde 32.7 60 0.0013 27.4 3.7 17 161-177 34-50 (245)
275 cd07207 Pat_ExoU_VipD_like Exo 31.2 61 0.0013 25.8 3.4 19 159-177 29-47 (194)
276 COG3340 PepE Peptidase E [Amin 30.5 1E+02 0.0022 25.4 4.4 43 72-117 30-72 (224)
277 KOG2872 Uroporphyrinogen decar 30.4 61 0.0013 27.9 3.2 34 72-118 250-283 (359)
278 PF08484 Methyltransf_14: C-me 30.1 1.5E+02 0.0033 23.1 5.3 36 157-200 69-104 (160)
279 COG2830 Uncharacterized protei 29.3 36 0.00078 26.5 1.6 32 157-198 57-88 (214)
280 KOG4372 Predicted alpha/beta h 29.1 18 0.0004 32.5 0.0 21 156-176 149-169 (405)
281 cd07198 Patatin Patatin-like p 29.1 73 0.0016 24.9 3.4 20 158-177 27-46 (172)
282 cd07222 Pat_PNPLA4 Patatin-lik 28.6 63 0.0014 27.2 3.2 17 160-176 34-50 (246)
283 COG3007 Uncharacterized paraqu 28.3 1.2E+02 0.0025 26.4 4.5 43 126-177 20-62 (398)
284 TIGR00632 vsr DNA mismatch end 28.1 1.4E+02 0.003 22.0 4.4 15 72-86 54-68 (117)
285 PRK10279 hypothetical protein; 27.2 75 0.0016 27.7 3.4 20 158-177 34-53 (300)
286 PLN02578 hydrolase 25.5 1.8E+02 0.0039 25.8 5.7 62 258-323 87-148 (354)
287 KOG2385 Uncharacterized conser 25.4 3.1E+02 0.0067 26.0 6.9 41 155-198 445-485 (633)
288 COG2871 NqrF Na+-transporting 25.1 4.1E+02 0.0089 23.1 7.1 46 35-83 236-284 (410)
289 smart00827 PKS_AT Acyl transfe 24.6 1.4E+02 0.003 25.7 4.7 19 157-175 82-100 (298)
290 cd07204 Pat_PNPLA_like Patatin 24.6 93 0.002 26.1 3.5 19 159-177 33-51 (243)
291 KOG1643 Triosephosphate isomer 24.4 1.8E+02 0.0038 23.8 4.6 57 122-197 175-232 (247)
292 cd07228 Pat_NTE_like_bacteria 24.3 65 0.0014 25.3 2.4 19 159-177 30-48 (175)
293 KOG4584 Uncharacterized conser 24.1 77 0.0017 27.4 2.8 46 257-302 269-314 (348)
294 cd07211 Pat_PNPLA8 Patatin-lik 24.1 59 0.0013 28.3 2.3 17 160-176 44-60 (308)
295 PF01734 Patatin: Patatin-like 24.0 64 0.0014 25.1 2.4 21 157-177 27-47 (204)
296 cd07213 Pat17_PNPLA8_PNPLA9_li 23.4 64 0.0014 27.9 2.3 18 160-177 37-54 (288)
297 COG1856 Uncharacterized homolo 23.4 4.4E+02 0.0096 22.0 6.9 67 98-177 102-177 (275)
298 KOG4127 Renal dipeptidase [Pos 23.1 3.3E+02 0.0072 24.5 6.4 78 74-167 266-345 (419)
299 cd07209 Pat_hypo_Ecoli_Z1214_l 22.7 66 0.0014 26.4 2.2 19 159-177 28-46 (215)
300 cd07217 Pat17_PNPLA8_PNPLA9_li 22.5 66 0.0014 28.7 2.3 17 160-176 44-60 (344)
301 PF10605 3HBOH: 3HB-oligomer h 22.4 7.4E+02 0.016 24.2 13.1 42 157-205 285-326 (690)
302 PRK10907 intramembrane serine 22.2 2.8E+02 0.006 23.9 5.9 48 272-323 11-58 (276)
303 cd01819 Patatin_and_cPLA2 Pata 22.1 1.3E+02 0.0028 23.1 3.6 19 157-175 28-46 (155)
304 cd07208 Pat_hypo_Ecoli_yjju_li 21.8 74 0.0016 27.0 2.4 18 160-177 30-47 (266)
305 TIGR01250 pro_imino_pep_2 prol 21.8 3.5E+02 0.0076 22.2 6.7 41 258-300 26-66 (288)
306 PF11713 Peptidase_C80: Peptid 21.6 1.3E+02 0.0028 23.4 3.4 17 153-169 100-116 (157)
307 COG0331 FabD (acyl-carrier-pro 21.5 1.7E+02 0.0036 25.8 4.5 22 155-176 83-104 (310)
308 PRK04531 acetylglutamate kinas 21.5 5.4E+02 0.012 23.6 7.9 9 76-84 68-76 (398)
309 cd07225 Pat_PNPLA6_PNPLA7 Pata 21.1 72 0.0016 27.9 2.2 19 159-177 45-63 (306)
310 PRK10673 acyl-CoA esterase; Pr 20.6 3.1E+02 0.0067 22.4 6.0 61 257-322 16-76 (255)
311 cd07199 Pat17_PNPLA8_PNPLA9_li 20.5 75 0.0016 26.8 2.2 18 160-177 37-54 (258)
312 cd07216 Pat17_PNPLA8_PNPLA9_li 20.4 64 0.0014 28.2 1.8 17 160-176 45-61 (309)
313 cd07206 Pat_TGL3-4-5_SDP1 Tria 20.3 1.3E+02 0.0029 26.2 3.6 18 160-177 100-117 (298)
314 PRK10824 glutaredoxin-4; Provi 20.2 2.7E+02 0.0058 20.3 4.7 80 72-177 13-92 (115)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=3e-39 Score=277.69 Aligned_cols=301 Identities=43% Similarity=0.755 Sum_probs=254.9
Q ss_pred cccccEEEeeCCcEEecCCC-CCCCCC-CCCCCceeeeeEecCCCCeEEEEEccCCCCC-CCCcEEEEEcCCccccCCCC
Q 020406 15 ECRGVLFVYSDGSIVRLPKP-SFSVPV-HDDGSVVWKDVVFDPVHDLSLRLYKPALPVS-TKLPIFYYIHGGGFCIGSRT 91 (326)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~-~~~~p~-~~~~~~~~~~v~~~~~~~~~~~~~~P~~~~~-~~~p~vv~~HGgg~~~~~~~ 91 (326)
.....+....++.+.+.... +..+|. .+...+..++|++....++.+++|.|..... .+.|+|||+|||||+.++..
T Consensus 28 ~~~~~i~i~~~~~~~r~~~~~~~~p~~~~p~~~v~~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~ 107 (336)
T KOG1515|consen 28 YLFENIRIFKDGSFERFFGRFDKVPPSSDPVNGVTSKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSAN 107 (336)
T ss_pred hhhhhceeecCCceeeeecccccCCCCCCcccCceeeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCC
Confidence 33567888999998887775 555554 3446788899999999999999999988755 78999999999999999877
Q ss_pred CCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHH
Q 020406 92 WPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIA 171 (326)
Q Consensus 92 ~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a 171 (326)
...|..++.+++.+.+.+|+++|||++|++++|...+|+..++.|+.++. |+.+.+|++||+|+|.|.||++|
T Consensus 108 ~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~-------~~~~~~D~~rv~l~GDSaGGNia 180 (336)
T KOG1515|consen 108 SPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNS-------WLKLGADPSRVFLAGDSAGGNIA 180 (336)
T ss_pred CchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhH-------HHHhCCCcccEEEEccCccHHHH
Confidence 76799999999999999999999999999999999999999999999873 23346999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCcccc--CCCcccCCHHHHHHHHHhcCCCCC-CCCCCccCCCC-C
Q 020406 172 HNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAE--GPREAFLNLELIDRFWRLSIPIGE-TTDHPLINPFG-P 247 (326)
Q Consensus 172 ~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~ 247 (326)
..++.+. ......+..++|.|+++|++..........+ ....+.......+.+|+...+... ...+++++|.. .
T Consensus 181 ~~va~r~--~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~ 258 (336)
T KOG1515|consen 181 HVVAQRA--ADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNS 258 (336)
T ss_pred HHHHHHH--hhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccc
Confidence 9999982 2222356899999999999988777655433 333356677788889998888887 78999999988 3
Q ss_pred CCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 248 VSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 248 ~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
.........++|+||+.++.|++.+++..++++|++.|.++++..++++.|+|..+++..+.+.+.++.+.+|+++.
T Consensus 259 ~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 259 LAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred cccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 33344456688999999999999999999999999999999999999999999999987788999999999999864
No 2
>PRK10162 acetyl esterase; Provisional
Probab=100.00 E-value=1.6e-35 Score=259.00 Aligned_cols=259 Identities=21% Similarity=0.271 Sum_probs=203.2
Q ss_pred ceeeeeEecCCC-CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc
Q 020406 46 VVWKDVVFDPVH-DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP 124 (326)
Q Consensus 46 ~~~~~v~~~~~~-~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~ 124 (326)
+..+++.++..+ .+.+++|.|.. ...|+|||+|||||..++... +...+..|+.+.|+.|+++|||++|+.++|
T Consensus 55 ~~~~~~~i~~~~g~i~~~~y~P~~---~~~p~vv~~HGGg~~~g~~~~--~~~~~~~la~~~g~~Vv~vdYrlape~~~p 129 (318)
T PRK10162 55 MATRAYMVPTPYGQVETRLYYPQP---DSQATLFYLHGGGFILGNLDT--HDRIMRLLASYSGCTVIGIDYTLSPEARFP 129 (318)
T ss_pred ceEEEEEEecCCCceEEEEECCCC---CCCCEEEEEeCCcccCCCchh--hhHHHHHHHHHcCCEEEEecCCCCCCCCCC
Confidence 345666666544 49999999964 346999999999999888764 677888999878999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcc
Q 020406 125 AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTV 204 (326)
Q Consensus 125 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~ 204 (326)
..++|+.++++|+.++...+ ++|+++|+|+|+|+||++|+.++.+ .......+..++++++++|+++...
T Consensus 130 ~~~~D~~~a~~~l~~~~~~~--------~~d~~~i~l~G~SaGG~la~~~a~~--~~~~~~~~~~~~~~vl~~p~~~~~~ 199 (318)
T PRK10162 130 QAIEEIVAVCCYFHQHAEDY--------GINMSRIGFAGDSAGAMLALASALW--LRDKQIDCGKVAGVLLWYGLYGLRD 199 (318)
T ss_pred CcHHHHHHHHHHHHHhHHHh--------CCChhHEEEEEECHHHHHHHHHHHH--HHhcCCCccChhheEEECCccCCCC
Confidence 99999999999999876654 3788999999999999999999976 2222223468999999999887532
Q ss_pred cCCccccC-CCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHH
Q 020406 205 RKKSEAEG-PREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKN 283 (326)
Q Consensus 205 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~ 283 (326)
. .+.... .....++...+..++..|.+.......+..+|+.... ....||++|++|+.|++.++++.|+++|++
T Consensus 200 ~-~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l----~~~lPp~~i~~g~~D~L~de~~~~~~~L~~ 274 (318)
T PRK10162 200 S-VSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDL----TRDVPPCFIAGAEFDPLLDDSRLLYQTLAA 274 (318)
T ss_pred C-hhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhh----hcCCCCeEEEecCCCcCcChHHHHHHHHHH
Confidence 2 111111 1111356667777888887654444445555543211 024789999999999999999999999999
Q ss_pred CCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 284 FGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 284 ~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
+|.++++++++|+.|+|..+.+..++.++.++.+.+||+++
T Consensus 275 aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 275 HQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred cCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887766788899999999999875
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=100.00 E-value=9.1e-32 Score=235.72 Aligned_cols=252 Identities=29% Similarity=0.466 Sum_probs=203.0
Q ss_pred EecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHH
Q 020406 52 VFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGY 131 (326)
Q Consensus 52 ~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~ 131 (326)
....+..+.+++|.|.....++.|+|||+|||||..++... +...+..++...|+.|+++|||+.|++++|..++|+.
T Consensus 57 ~~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~--~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~ 134 (312)
T COG0657 57 AGPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRT--HDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAY 134 (312)
T ss_pred cCCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhh--hHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHH
Confidence 34555568999999933334678999999999999999885 5578888999889999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCcccc
Q 020406 132 MAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAE 211 (326)
Q Consensus 132 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~ 211 (326)
+++.|+.++...++ +|+++|+|+|+|.||++|+.++... ... ....+.+.++++|+++......+...
T Consensus 135 ~a~~~l~~~~~~~g--------~dp~~i~v~GdSAGG~La~~~a~~~--~~~--~~~~p~~~~li~P~~d~~~~~~~~~~ 202 (312)
T COG0657 135 AAYRWLRANAAELG--------IDPSRIAVAGDSAGGHLALALALAA--RDR--GLPLPAAQVLISPLLDLTSSAASLPG 202 (312)
T ss_pred HHHHHHHhhhHhhC--------CCccceEEEecCcccHHHHHHHHHH--Hhc--CCCCceEEEEEecccCCcccccchhh
Confidence 99999999876654 8999999999999999999999872 222 23578999999999988763333333
Q ss_pred CCCcccCCHHHHH-HHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEE
Q 020406 212 GPREAFLNLELID-RFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEY 290 (326)
Q Consensus 212 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l 290 (326)
......+...... ++...+.........+..+|+.... ..++||++|++|+.|++.++++.++++|+++|.++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~----~~~lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~ 278 (312)
T COG0657 203 YGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDD----LSGLPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVEL 278 (312)
T ss_pred cCCccccCHHHHHHHHHHHhCcCccccCCCccCcccccc----ccCCCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEE
Confidence 4444455555555 6777777655555556777776654 1227899999999999999999999999999999999
Q ss_pred EEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 291 VEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 291 ~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
..++++.|+|..... +...+.+..+.+|++.
T Consensus 279 ~~~~g~~H~f~~~~~--~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 279 RVYPGMIHGFDLLTG--PEARSALRQIAAFLRA 309 (312)
T ss_pred EEeCCcceeccccCc--HHHHHHHHHHHHHHHH
Confidence 999999998876654 6667778888888873
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.97 E-value=1e-31 Score=222.53 Aligned_cols=206 Identities=38% Similarity=0.625 Sum_probs=161.2
Q ss_pred EEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCC
Q 020406 77 FYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADF 156 (326)
Q Consensus 77 vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~ 156 (326)
|||+|||||..++... ...++..++.+.|+.|+.+|||++|+..+++.++|+.++++|+.++...+ ++|+
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~--------~~d~ 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKL--------GIDP 70 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHH--------TEEE
T ss_pred CEEECCcccccCChHH--HHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccc--------cccc
Confidence 7999999999998875 67788999986699999999999999999999999999999999986443 4888
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC-cccCCcc---ccCCCcccCCHHHHHHHHHhcCC
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG-TVRKKSE---AEGPREAFLNLELIDRFWRLSIP 232 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 232 (326)
++|+|+|+|.||++|+.++.+. .... ...++++++++|+++. .....+. ......+++.......+++.+.+
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~~--~~~~--~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALRA--RDRG--LPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLP 146 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHHH--HHTT--TCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHS
T ss_pred cceEEeecccccchhhhhhhhh--hhhc--ccchhhhhcccccccchhcccccccccccccccccccccccccccccccc
Confidence 9999999999999999999872 2211 2459999999999877 2222222 11233456677778888887775
Q ss_pred CCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeee
Q 020406 233 IGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFF 301 (326)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~ 301 (326)
......+..+|+... +....||++|++|+.|++.++++.|+++|++.|.++++++++++.|+|.
T Consensus 147 -~~~~~~~~~sp~~~~----~~~~~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 147 -GSDRDDPLASPLNAS----DLKGLPPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp -TGGTTSTTTSGGGSS----CCTTCHEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred -ccccccccccccccc----ccccCCCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 445556778877661 1233789999999999999999999999999999999999999999875
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.95 E-value=6.6e-27 Score=221.38 Aligned_cols=236 Identities=24% Similarity=0.249 Sum_probs=173.1
Q ss_pred eeeeeEecCCCC--eEEEEEccCCCC-CCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC-
Q 020406 47 VWKDVVFDPVHD--LSLRLYKPALPV-STKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR- 122 (326)
Q Consensus 47 ~~~~v~~~~~~~--~~~~~~~P~~~~-~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~- 122 (326)
..+.+++++.++ +...++.|.+.. .++.|+||++|||....-.. .+......++.+ ||+|+.+|||++..+.
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~---~~~~~~q~~~~~-G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGY---SFNPEIQVLASA-GYAVLAPNYRGSTGYGR 439 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCcccccc---ccchhhHHHhcC-CeEEEEeCCCCCCccHH
Confidence 346677777554 778889998763 34579999999986433332 366667777776 9999999999876532
Q ss_pred ----------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeE
Q 020406 123 ----------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKG 192 (326)
Q Consensus 123 ----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~ 192 (326)
.....+|+.++++++.+.. .+|++|++|+|+|+||+++++.+.+ .+ .+++
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~~l~~~~-----------~~d~~ri~i~G~SyGGymtl~~~~~--------~~-~f~a 499 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVDALVKLP-----------LVDPERIGITGGSYGGYMTLLAATK--------TP-RFKA 499 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHhCC-----------CcChHHeEEeccChHHHHHHHHHhc--------Cc-hhhe
Confidence 2346889999999887665 5899999999999999999999988 44 7899
Q ss_pred EEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCC--CCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--
Q 020406 193 YILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIG--ETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD-- 268 (326)
Q Consensus 193 ~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D-- 268 (326)
++..++..+........... + ...+....... ........+|+...... .+|+|||||++|
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-----~~P~LliHG~~D~~ 564 (620)
T COG1506 500 AVAVAGGVDWLLYFGESTEG----L------RFDPEENGGGPPEDREKYEDRSPIFYADNI-----KTPLLLIHGEEDDR 564 (620)
T ss_pred EEeccCcchhhhhccccchh----h------cCCHHHhCCCcccChHHHHhcChhhhhccc-----CCCEEEEeecCCcc
Confidence 98888866654432211110 0 00000000000 12234457777776665 679999999999
Q ss_pred cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 269 LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 269 ~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
++.+|+++|+++|+..|.++++++||+++|.+.. .++..+.++.+.+|+++|.
T Consensus 565 v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~----~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 565 VPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR----PENRVKVLKEILDWFKRHL 617 (620)
T ss_pred CChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC----chhHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999998764 3567889999999998763
No 6
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.91 E-value=2.6e-24 Score=178.27 Aligned_cols=194 Identities=22% Similarity=0.246 Sum_probs=132.3
Q ss_pred chhHHHHHhhcCCcEEEeecCCCCCCCC-----------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEee
Q 020406 95 CQNYCFKLASELQAVIISPDYRLAPENR-----------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISG 163 (326)
Q Consensus 95 ~~~~~~~la~~~g~~vi~~d~r~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G 163 (326)
+......|+++ ||+|+.+|||++++.. ....++|+.++++++.++. .+|++||+|+|
T Consensus 3 f~~~~~~la~~-Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-----------~iD~~ri~i~G 70 (213)
T PF00326_consen 3 FNWNAQLLASQ-GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-----------YIDPDRIGIMG 70 (213)
T ss_dssp -SHHHHHHHTT-T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-----------SEEEEEEEEEE
T ss_pred eeHHHHHHHhC-CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-----------cccceeEEEEc
Confidence 34344445555 9999999999877432 1346889999999998876 48999999999
Q ss_pred cChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccC
Q 020406 164 DSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLIN 243 (326)
Q Consensus 164 ~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (326)
+|+||++|+.++.+ .++.++++++.+|+++.......... .........-.+..........+
T Consensus 71 ~S~GG~~a~~~~~~--------~~~~f~a~v~~~g~~d~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~s 133 (213)
T PF00326_consen 71 HSYGGYLALLAATQ--------HPDRFKAAVAGAGVSDLFSYYGTTDI---------YTKAEYLEYGDPWDNPEFYRELS 133 (213)
T ss_dssp ETHHHHHHHHHHHH--------TCCGSSEEEEESE-SSTTCSBHHTCC---------HHHGHHHHHSSTTTSHHHHHHHH
T ss_pred ccccccccchhhcc--------cceeeeeeeccceecchhcccccccc---------cccccccccCccchhhhhhhhhc
Confidence 99999999999998 88999999999999876654221100 00001111111100001111122
Q ss_pred CCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHh
Q 020406 244 PFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFI 321 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl 321 (326)
|+....... ..+|+||+||++| +++.++.+++++|++.|.+++++++|+++|.+.. .+...+..+.+.+|+
T Consensus 134 ~~~~~~~~~---~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~----~~~~~~~~~~~~~f~ 206 (213)
T PF00326_consen 134 PISPADNVQ---IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN----PENRRDWYERILDFF 206 (213)
T ss_dssp HGGGGGGCG---GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS----HHHHHHHHHHHHHHH
T ss_pred ccccccccc---CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC----chhHHHHHHHHHHHH
Confidence 322222200 1569999999999 7889999999999999999999999999996552 245568899999999
Q ss_pred hhc
Q 020406 322 AEN 324 (326)
Q Consensus 322 ~~~ 324 (326)
+++
T Consensus 207 ~~~ 209 (213)
T PF00326_consen 207 DKY 209 (213)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 7
>PRK10566 esterase; Provisional
Probab=99.89 E-value=3.1e-21 Score=163.80 Aligned_cols=218 Identities=18% Similarity=0.164 Sum_probs=130.7
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCC-------CC-------
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPEN-------RL------- 123 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~-------~~------- 123 (326)
++....|.|.+..+++.|+||++||.+ ++... +..++..|+.+ ||.|+.+|+|+.+.. ..
T Consensus 11 ~~~~~~~~p~~~~~~~~p~vv~~HG~~---~~~~~--~~~~~~~l~~~-G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK10566 11 GIEVLHAFPAGQRDTPLPTVFFYHGFT---SSKLV--YSYFAVALAQA-GFRVIMPDAPMHGARFSGDEARRLNHFWQIL 84 (249)
T ss_pred CcceEEEcCCCCCCCCCCEEEEeCCCC---cccch--HHHHHHHHHhC-CCEEEEecCCcccccCCCccccchhhHHHHH
Confidence 444455667654345679999999863 33332 55667777665 999999999975432 11
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec--cccC
Q 020406 124 PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA--PFFG 201 (326)
Q Consensus 124 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~--p~~~ 201 (326)
...++|+.++++++.+.. .+|.++|+++|||+||.+|+.++.+ .+. +++.+.+. +++.
T Consensus 85 ~~~~~~~~~~~~~l~~~~-----------~~~~~~i~v~G~S~Gg~~al~~~~~--------~~~-~~~~~~~~~~~~~~ 144 (249)
T PRK10566 85 LQNMQEFPTLRAAIREEG-----------WLLDDRLAVGGASMGGMTALGIMAR--------HPW-VKCVASLMGSGYFT 144 (249)
T ss_pred HHHHHHHHHHHHHHHhcC-----------CcCccceeEEeecccHHHHHHHHHh--------CCC-eeEEEEeeCcHHHH
Confidence 123556667777776643 3778999999999999999999877 433 44443332 2221
Q ss_pred CcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHH
Q 020406 202 GTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAK 279 (326)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~ 279 (326)
...... ....................... ..++.. .+......|+|++||++| ++.++++.+++
T Consensus 145 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~----~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~ 210 (249)
T PRK10566 145 SLARTL-FPPLIPETAAQQAEFNNIVAPLA---------EWEVTH----QLEQLADRPLLLWHGLADDVVPAAESLRLQQ 210 (249)
T ss_pred HHHHHh-cccccccccccHHHHHHHHHHHh---------hcChhh----hhhhcCCCCEEEEEcCCCCcCCHHHHHHHHH
Confidence 000000 00000000000001111111000 001100 001111249999999999 77889999999
Q ss_pred HHHHCCC--cEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 280 TLKNFGK--KVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 280 ~l~~~g~--~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
.++.+|. ++++..+++++|.+. .+.+..+.+||+++
T Consensus 211 ~l~~~g~~~~~~~~~~~~~~H~~~---------~~~~~~~~~fl~~~ 248 (249)
T PRK10566 211 ALRERGLDKNLTCLWEPGVRHRIT---------PEALDAGVAFFRQH 248 (249)
T ss_pred HHHhcCCCcceEEEecCCCCCccC---------HHHHHHHHHHHHhh
Confidence 9998875 489999999999753 35689999999865
No 8
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.88 E-value=8e-21 Score=156.97 Aligned_cols=238 Identities=17% Similarity=0.206 Sum_probs=153.0
Q ss_pred cCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC--------Cch
Q 020406 54 DPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR--------LPA 125 (326)
Q Consensus 54 ~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~--------~~~ 125 (326)
..+..+....|.|... .+++..|+++||.|.. +.. .+..++.+|+.. ||.|+++||++.+.+. +..
T Consensus 35 ~rG~~lft~~W~p~~~-~~pr~lv~~~HG~g~~--~s~--~~~~~a~~l~~~-g~~v~a~D~~GhG~SdGl~~yi~~~d~ 108 (313)
T KOG1455|consen 35 PRGAKLFTQSWLPLSG-TEPRGLVFLCHGYGEH--SSW--RYQSTAKRLAKS-GFAVYAIDYEGHGRSDGLHAYVPSFDL 108 (313)
T ss_pred CCCCEeEEEecccCCC-CCCceEEEEEcCCccc--chh--hHHHHHHHHHhC-CCeEEEeeccCCCcCCCCcccCCcHHH
Confidence 4444577778999763 3788899999986432 212 277788888877 9999999999765543 345
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCccc
Q 020406 126 AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVR 205 (326)
Q Consensus 126 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~ 205 (326)
.++|+...++.++.+.+.-+ -..+++||||||.+|+.++.+ .|....|+|+++|.......
T Consensus 109 ~v~D~~~~~~~i~~~~e~~~-----------lp~FL~GeSMGGAV~Ll~~~k--------~p~~w~G~ilvaPmc~i~~~ 169 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREENKG-----------LPRFLFGESMGGAVALLIALK--------DPNFWDGAILVAPMCKISED 169 (313)
T ss_pred HHHHHHHHHHHHhhccccCC-----------CCeeeeecCcchHHHHHHHhh--------CCcccccceeeecccccCCc
Confidence 67788888887766654322 578999999999999999998 88999999999998755433
Q ss_pred CCccccCCCcccCCHHHHHHHHHhc--CCCCCC----------CCCCccCCCCCC------------------CCCcccC
Q 020406 206 KKSEAEGPREAFLNLELIDRFWRLS--IPIGET----------TDHPLINPFGPV------------------SPSLEAV 255 (326)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----------~~~~~~~~~~~~------------------~~~~~~~ 255 (326)
.+.... . ......+..+...+ .+.... ......+|+... ..++..
T Consensus 170 ~kp~p~---v-~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~- 244 (313)
T KOG1455|consen 170 TKPHPP---V-ISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNE- 244 (313)
T ss_pred cCCCcH---H-HHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccc-
Confidence 211000 0 00000000000000 000000 000011221110 111111
Q ss_pred CCCcEEEEEcCcCcc--hhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 256 DLDPILVVVGGSDLL--KDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 256 ~~~P~lii~G~~D~~--~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
...|++|+||+.|.+ ..-++++++..... +.++++|||+.|.....+ ..++.+.++..|.+||+++
T Consensus 245 vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~--DKTlKlYpGm~H~Ll~gE-~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 245 VTVPFLILHGTDDKVTDPKVSKELYEKASSS--DKTLKLYPGMWHSLLSGE-PDENVEIVFGDIISWLDER 312 (313)
T ss_pred ccccEEEEecCCCcccCcHHHHHHHHhccCC--CCceeccccHHHHhhcCC-CchhHHHHHHHHHHHHHhc
Confidence 133999999999944 44677888877654 558999999999877544 3377899999999999986
No 9
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.88 E-value=1.7e-20 Score=161.33 Aligned_cols=219 Identities=16% Similarity=0.205 Sum_probs=136.9
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCC--CCCCC-------------C
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYR--LAPEN-------------R 122 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r--~~~~~-------------~ 122 (326)
.+.+.+|.|.+...++.|+|+++||.+ ++...+.....+..++.+.|+.|+.||+. ..... .
T Consensus 26 ~~~~~v~~P~~~~~~~~P~vvllHG~~---~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~ 102 (275)
T TIGR02821 26 PMTFGVFLPPQAAAGPVPVLWYLSGLT---CTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGF 102 (275)
T ss_pred ceEEEEEcCCCccCCCCCEEEEccCCC---CCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccc
Confidence 467889999764345789999999864 22222112223457777779999999973 22100 0
Q ss_pred C------c-----hHHHHHHHHHHH-HHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcce
Q 020406 123 L------P-----AAIEDGYMAVKW-LQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRV 190 (326)
Q Consensus 123 ~------~-----~~~~d~~~~~~~-l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i 190 (326)
+ + .....+.+.+.. +.+.. .+|.++++|+||||||++|+.++.+ .|+.+
T Consensus 103 ~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~~G~S~GG~~a~~~a~~--------~p~~~ 163 (275)
T TIGR02821 103 YVDATEEPWSQHYRMYSYIVQELPALVAAQF-----------PLDGERQGITGHSMGGHGALVIALK--------NPDRF 163 (275)
T ss_pred cccCCcCcccccchHHHHHHHHHHHHHHhhC-----------CCCCCceEEEEEChhHHHHHHHHHh--------Ccccc
Confidence 0 0 112222222222 22221 3777899999999999999999999 88999
Q ss_pred eEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcc
Q 020406 191 KGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLL 270 (326)
Q Consensus 191 ~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~ 270 (326)
+++++++|+.+.... .. .. .....++... .......++...... ....+|++|.||+.|..
T Consensus 164 ~~~~~~~~~~~~~~~----------~~-~~----~~~~~~l~~~-~~~~~~~~~~~~~~~---~~~~~plli~~G~~D~~ 224 (275)
T TIGR02821 164 KSVSAFAPIVAPSRC----------PW-GQ----KAFSAYLGAD-EAAWRSYDASLLVAD---GGRHSTILIDQGTADQF 224 (275)
T ss_pred eEEEEECCccCcccC----------cc-hH----HHHHHHhccc-ccchhhcchHHHHhh---cccCCCeeEeecCCCcc
Confidence 999999998764311 00 01 1112222211 111111122111110 11256999999999943
Q ss_pred --h-hhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 271 --K-DRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 271 --~-~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
. .++..+.+++++.+.++++.++||++|+|..+ ...+...++|..++
T Consensus 225 v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~-------~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 225 LDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFI-------ASFIADHLRHHAER 274 (275)
T ss_pred cCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhH-------HHhHHHHHHHHHhh
Confidence 3 35678999999999999999999999999764 46677777777654
No 10
>PHA02857 monoglyceride lipase; Provisional
Probab=99.87 E-value=1.8e-20 Score=161.53 Aligned_cols=236 Identities=17% Similarity=0.179 Sum_probs=139.2
Q ss_pred cCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC--------ch
Q 020406 54 DPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL--------PA 125 (326)
Q Consensus 54 ~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~--------~~ 125 (326)
.++..+.+++|.|.. .+.++|+++||.+ ++... |..++..|+.+ ||.|+++|+|+.+.+.. ..
T Consensus 8 ~~g~~l~~~~~~~~~---~~~~~v~llHG~~---~~~~~--~~~~~~~l~~~-g~~via~D~~G~G~S~~~~~~~~~~~~ 78 (276)
T PHA02857 8 LDNDYIYCKYWKPIT---YPKALVFISHGAG---EHSGR--YEELAENISSL-GILVFSHDHIGHGRSNGEKMMIDDFGV 78 (276)
T ss_pred CCCCEEEEEeccCCC---CCCEEEEEeCCCc---cccch--HHHHHHHHHhC-CCEEEEccCCCCCCCCCccCCcCCHHH
Confidence 345567888888853 4568999999753 22332 77777777766 99999999998765421 22
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCccc
Q 020406 126 AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVR 205 (326)
Q Consensus 126 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~ 205 (326)
.++|+...++++++.. ...+++|+|||+||.+|+.++.+ .++.++++|+++|.......
T Consensus 79 ~~~d~~~~l~~~~~~~-------------~~~~~~lvG~S~GG~ia~~~a~~--------~p~~i~~lil~~p~~~~~~~ 137 (276)
T PHA02857 79 YVRDVVQHVVTIKSTY-------------PGVPVFLLGHSMGATISILAAYK--------NPNLFTAMILMSPLVNAEAV 137 (276)
T ss_pred HHHHHHHHHHHHHhhC-------------CCCCEEEEEcCchHHHHHHHHHh--------CccccceEEEeccccccccc
Confidence 3555656665554432 22689999999999999999988 77889999999997642211
Q ss_pred CCcc----------ccCCCcccCCHHH----HHHHHHh-cCCCCCC--CCCCccCCCC----CCCCCcccCCCCcEEEEE
Q 020406 206 KKSE----------AEGPREAFLNLEL----IDRFWRL-SIPIGET--TDHPLINPFG----PVSPSLEAVDLDPILVVV 264 (326)
Q Consensus 206 ~~~~----------~~~~~~~~~~~~~----~~~~~~~-~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~P~lii~ 264 (326)
.... ............. ....... ..+.... ........+. .....+... ..|+|+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvliv~ 216 (276)
T PHA02857 138 PRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKI-KTPILILQ 216 (276)
T ss_pred cHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccC-CCCEEEEe
Confidence 0000 0000000000000 0000000 0000000 0000000000 000111111 35999999
Q ss_pred cCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 265 GGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 265 G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
|++| ++.+.++++++.+.. ++++.++++++|...... .+..+++++.+.+||.+++
T Consensus 217 G~~D~i~~~~~~~~l~~~~~~---~~~~~~~~~~gH~~~~e~--~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 217 GTNNEISDVSGAYYFMQHANC---NREIKIYEGAKHHLHKET--DEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred cCCCCcCChHHHHHHHHHccC---CceEEEeCCCcccccCCc--hhHHHHHHHHHHHHHHHhc
Confidence 9999 556677777766532 469999999999665322 2457899999999999864
No 11
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=4.8e-20 Score=163.05 Aligned_cols=242 Identities=19% Similarity=0.236 Sum_probs=143.9
Q ss_pred ceeeeeEecCCC--CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC-
Q 020406 46 VVWKDVVFDPVH--DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR- 122 (326)
Q Consensus 46 ~~~~~v~~~~~~--~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~- 122 (326)
+..++..+...+ .+.++.|.|.+. ..++++||++||.|- .... .+..++..|+.+ ||.|+++|+|+.+.+.
T Consensus 30 ~~~~~~~~~~~dg~~l~~~~~~~~~~-~~~~~~VvllHG~~~--~~~~--~~~~~~~~L~~~-Gy~V~~~D~rGhG~S~~ 103 (330)
T PLN02298 30 IKGSKSFFTSPRGLSLFTRSWLPSSS-SPPRALIFMVHGYGN--DISW--TFQSTAIFLAQM-GFACFALDLEGHGRSEG 103 (330)
T ss_pred CccccceEEcCCCCEEEEEEEecCCC-CCCceEEEEEcCCCC--Ccce--ehhHHHHHHHhC-CCEEEEecCCCCCCCCC
Confidence 444444444334 466666776542 246789999997531 1111 244556667665 9999999999776543
Q ss_pred -------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEE
Q 020406 123 -------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYIL 195 (326)
Q Consensus 123 -------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il 195 (326)
+....+|+..+++++.... ..+..+++|+||||||.+|+.++.+ .|++++++|+
T Consensus 104 ~~~~~~~~~~~~~D~~~~i~~l~~~~-----------~~~~~~i~l~GhSmGG~ia~~~a~~--------~p~~v~~lvl 164 (330)
T PLN02298 104 LRAYVPNVDLVVEDCLSFFNSVKQRE-----------EFQGLPRFLYGESMGGAICLLIHLA--------NPEGFDGAVL 164 (330)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHhcc-----------cCCCCCEEEEEecchhHHHHHHHhc--------CcccceeEEE
Confidence 2335678888888887543 1233579999999999999999988 7789999999
Q ss_pred eccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCC-----CCC-C----CC------ccCCCCC------------
Q 020406 196 LAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIG-----ETT-D----HP------LINPFGP------------ 247 (326)
Q Consensus 196 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~----~~------~~~~~~~------------ 247 (326)
++|........... . .......+...+.+.. ... . .. ..++...
T Consensus 165 ~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (330)
T PLN02298 165 VAPMCKISDKIRPP-------W-PIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVEL 236 (330)
T ss_pred ecccccCCcccCCc-------h-HHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHH
Confidence 99976432211000 0 0000000000110000 000 0 00 0001000
Q ss_pred ------CCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHH
Q 020406 248 ------VSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKH 319 (326)
Q Consensus 248 ------~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~ 319 (326)
....+... ..|+||+||++| ++.+.++.+++++.. .+.+++++++++|......+ ....+.+.+.+.+
T Consensus 237 ~~~~~~~~~~l~~i-~~PvLii~G~~D~ivp~~~~~~l~~~i~~--~~~~l~~~~~a~H~~~~e~p-d~~~~~~~~~i~~ 312 (330)
T PLN02298 237 LRVTDYLGKKLKDV-SIPFIVLHGSADVVTDPDVSRALYEEAKS--EDKTIKIYDGMMHSLLFGEP-DENIEIVRRDILS 312 (330)
T ss_pred HHHHHHHHHhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHHhcc--CCceEEEcCCcEeeeecCCC-HHHHHHHHHHHHH
Confidence 00111112 359999999999 566777777777653 34689999999996654332 1234678899999
Q ss_pred Hhhhc
Q 020406 320 FIAEN 324 (326)
Q Consensus 320 fl~~~ 324 (326)
||.++
T Consensus 313 fl~~~ 317 (330)
T PLN02298 313 WLNER 317 (330)
T ss_pred HHHHh
Confidence 99875
No 12
>PRK13604 luxD acyl transferase; Provisional
Probab=99.87 E-value=3.6e-20 Score=157.24 Aligned_cols=210 Identities=11% Similarity=0.081 Sum_probs=130.7
Q ss_pred EecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC-CCCC-------C
Q 020406 52 VFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLA-PENR-------L 123 (326)
Q Consensus 52 ~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~-~~~~-------~ 123 (326)
...++..+..++..|......+.++||++||-+ +... .+..++..|+.+ ||.|+.+|+|.+ +++. .
T Consensus 15 ~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~---~~~~--~~~~~A~~La~~-G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 15 CLENGQSIRVWETLPKENSPKKNNTILIASGFA---RRMD--HFAGLAEYLSSN-GFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred EcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCC---CChH--HHHHHHHHHHHC-CCEEEEecCCCCCCCCCCccccCcc
Confidence 334444466667777643456789999999642 2222 266777777766 999999998754 4321 2
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCc
Q 020406 124 PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 124 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~ 203 (326)
.....|+..+++|+++.. .++|+|+||||||.+|+..|.. ..++++|+.+|+.+..
T Consensus 89 s~g~~Dl~aaid~lk~~~--------------~~~I~LiG~SmGgava~~~A~~----------~~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRG--------------INNLGLIAASLSARIAYEVINE----------IDLSFLITAVGVVNLR 144 (307)
T ss_pred cccHHHHHHHHHHHHhcC--------------CCceEEEEECHHHHHHHHHhcC----------CCCCEEEEcCCcccHH
Confidence 346789999999998742 2689999999999998777654 4599999999998744
Q ss_pred ccCCccccC-----CCcc------cCCHHH-HHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--c
Q 020406 204 VRKKSEAEG-----PREA------FLNLEL-IDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--L 269 (326)
Q Consensus 204 ~~~~~~~~~-----~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~ 269 (326)
......... +... +..... ...+.+..... ......++....... ..|+|++||+.| +
T Consensus 145 d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~---~~~~~~s~i~~~~~l-----~~PvLiIHG~~D~lV 216 (307)
T PRK13604 145 DTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKH---GWDTLDSTINKMKGL-----DIPFIAFTANNDSWV 216 (307)
T ss_pred HHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhc---CccccccHHHHHhhc-----CCCEEEEEcCCCCcc
Confidence 221100000 0000 000000 01111111000 001112232222211 249999999999 7
Q ss_pred chhhHHHHHHHHHHCCCcEEEEEeCCCceeee
Q 020406 270 LKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFF 301 (326)
Q Consensus 270 ~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~ 301 (326)
+.+.++++++.++. .+++++++||+.|.+.
T Consensus 217 p~~~s~~l~e~~~s--~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 217 KQSEVIDLLDSIRS--EQCKLYSLIGSSHDLG 246 (307)
T ss_pred CHHHHHHHHHHhcc--CCcEEEEeCCCccccC
Confidence 78888888888653 4679999999999775
No 13
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.87 E-value=4e-20 Score=164.63 Aligned_cols=249 Identities=15% Similarity=0.125 Sum_probs=138.6
Q ss_pred ceeeeeEecCCCC--eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC
Q 020406 46 VVWKDVVFDPVHD--LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL 123 (326)
Q Consensus 46 ~~~~~v~~~~~~~--~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~ 123 (326)
+..++....+.++ +....+.|.+. .++|+|||+||.|. .... .|..++..|+.+ ||.|+++|+|+.+.+..
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~~--~~~~~iv~lHG~~~--~~~~--~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~ 131 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPENS--RPKAAVCFCHGYGD--TCTF--FFEGIARKIASS-GYGVFAMDYPGFGLSEG 131 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCCC--CCCeEEEEECCCCC--ccch--HHHHHHHHHHhC-CCEEEEecCCCCCCCCC
Confidence 3333333333344 55556667542 46799999997532 2111 134566777665 99999999997765432
Q ss_pred --------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEE
Q 020406 124 --------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYIL 195 (326)
Q Consensus 124 --------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il 195 (326)
...++|+.+.++.+.... ..+..+++|+||||||.+|+.++.+ +|.+++++|+
T Consensus 132 ~~~~~~~~~~~~~dv~~~l~~l~~~~-----------~~~~~~~~LvGhSmGG~val~~a~~--------~p~~v~glVL 192 (349)
T PLN02385 132 LHGYIPSFDDLVDDVIEHYSKIKGNP-----------EFRGLPSFLFGQSMGGAVALKVHLK--------QPNAWDGAIL 192 (349)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHhcc-----------ccCCCCEEEEEeccchHHHHHHHHh--------CcchhhheeE
Confidence 234555555665554322 1334589999999999999999998 8889999999
Q ss_pred eccccCCcccCCccc--------------c---CCCccc----CCHHHHHHHHHhcCCCCCCCCCCc---cCCCC---CC
Q 020406 196 LAPFFGGTVRKKSEA--------------E---GPREAF----LNLELIDRFWRLSIPIGETTDHPL---INPFG---PV 248 (326)
Q Consensus 196 ~~p~~~~~~~~~~~~--------------~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~ 248 (326)
++|............ . .....+ .......... .+........... ...+. ..
T Consensus 193 i~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 271 (349)
T PLN02385 193 VAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMA-EYNVIAYKDKPRLRTAVELLRTTQEI 271 (349)
T ss_pred ecccccccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHh-hcCcceeCCCcchHHHHHHHHHHHHH
Confidence 998764321100000 0 000000 0000000000 0000000000000 00000 00
Q ss_pred CCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 249 SPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 249 ~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
...+.. ...|+||+||++| ++.+.++.+++++.. .+.+++++++++|......+ .+..+++++.+.+||++|.
T Consensus 272 ~~~l~~-i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~--~~~~l~~i~~~gH~l~~e~p-~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 272 EMQLEE-VSLPLLILHGEADKVTDPSVSKFLYEKASS--SDKKLKLYEDAYHSILEGEP-DEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HHhccc-CCCCEEEEEeCCCCccChHHHHHHHHHcCC--CCceEEEeCCCeeecccCCC-hhhHHHHHHHHHHHHHHhc
Confidence 001111 1449999999999 445567777776643 34689999999996543221 1225568999999999875
No 14
>PRK10115 protease 2; Provisional
Probab=99.86 E-value=3.4e-20 Score=176.86 Aligned_cols=219 Identities=15% Similarity=0.091 Sum_probs=153.8
Q ss_pred CceeeeeEecCCCC--eEEEEEc-cCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCC
Q 020406 45 SVVWKDVVFDPVHD--LSLRLYK-PALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPEN 121 (326)
Q Consensus 45 ~~~~~~v~~~~~~~--~~~~~~~-P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~ 121 (326)
....+.+.+++.++ |.+.+.+ |.....++.|+||++|||- +....+.|......|+.+ |++|+.+++|++++.
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~---~~~~~p~f~~~~~~l~~r-G~~v~~~n~RGs~g~ 488 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSY---GASIDADFSFSRLSLLDR-GFVYAIVHVRGGGEL 488 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCC---CCCCCCCccHHHHHHHHC-CcEEEEEEcCCCCcc
Confidence 45677888877776 5554444 4332346679999999963 333222365656667776 999999999988764
Q ss_pred C-----------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcce
Q 020406 122 R-----------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRV 190 (326)
Q Consensus 122 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i 190 (326)
. .....+|+.++.+||.++. .+|++|++++|.|+||+++..++.+ .|+++
T Consensus 489 G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g-----------~~d~~rl~i~G~S~GG~l~~~~~~~--------~Pdlf 549 (686)
T PRK10115 489 GQQWYEDGKFLKKKNTFNDYLDACDALLKLG-----------YGSPSLCYGMGGSAGGMLMGVAINQ--------RPELF 549 (686)
T ss_pred CHHHHHhhhhhcCCCcHHHHHHHHHHHHHcC-----------CCChHHeEEEEECHHHHHHHHHHhc--------Chhhe
Confidence 3 1246889999999998775 5899999999999999999999988 88999
Q ss_pred eEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCC----CCCccCCCCCCCCCcccCCCCcEEEEEcC
Q 020406 191 KGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETT----DHPLINPFGPVSPSLEAVDLDPILVVVGG 266 (326)
Q Consensus 191 ~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~P~lii~G~ 266 (326)
+++|...|++++........ .+. ... . +..+ +..... .....||+...... ..|++||+||+
T Consensus 550 ~A~v~~vp~~D~~~~~~~~~----~p~-~~~---~-~~e~-G~p~~~~~~~~l~~~SP~~~v~~~----~~P~lLi~~g~ 615 (686)
T PRK10115 550 HGVIAQVPFVDVVTTMLDES----IPL-TTG---E-FEEW-GNPQDPQYYEYMKSYSPYDNVTAQ----AYPHLLVTTGL 615 (686)
T ss_pred eEEEecCCchhHhhhcccCC----CCC-Chh---H-HHHh-CCCCCHHHHHHHHHcCchhccCcc----CCCceeEEecC
Confidence 99999999998764321100 000 000 1 1111 111111 01225777666543 24347888999
Q ss_pred cC--cchhhHHHHHHHHHHCCCcEEEEEe---CCCceee
Q 020406 267 SD--LLKDRAEDYAKTLKNFGKKVEYVEF---EGKQHGF 300 (326)
Q Consensus 267 ~D--~~~~~~~~~~~~l~~~g~~~~l~~~---~~~~H~~ 300 (326)
+| |+..++.+++.+|++.+.+++++++ +++||+.
T Consensus 616 ~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 616 HDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred CCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Confidence 99 8888999999999999988888888 9999973
No 15
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.85 E-value=8.4e-21 Score=147.15 Aligned_cols=207 Identities=19% Similarity=0.248 Sum_probs=154.1
Q ss_pred CceeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCC-CC
Q 020406 45 SVVWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPEN-RL 123 (326)
Q Consensus 45 ~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~-~~ 123 (326)
.++.+++.|..+....+++|.|.. ..|+.||+|||-|..|++.+ .. .....+.+.||.|.+++|-++++. ..
T Consensus 42 i~r~e~l~Yg~~g~q~VDIwg~~~----~~klfIfIHGGYW~~g~rk~--cl-siv~~a~~~gY~vasvgY~l~~q~htL 114 (270)
T KOG4627|consen 42 IIRVEHLRYGEGGRQLVDIWGSTN----QAKLFIFIHGGYWQEGDRKM--CL-SIVGPAVRRGYRVASVGYNLCPQVHTL 114 (270)
T ss_pred ccchhccccCCCCceEEEEecCCC----CccEEEEEecchhhcCchhc--cc-chhhhhhhcCeEEEEeccCcCcccccH
Confidence 456788999988889999999854 56899999999999888874 33 344556677999999999999886 67
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCc
Q 020406 124 PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 124 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~ 203 (326)
.+.+.+....++|+.+..+. ...+.+.|||.|+++|++..++. ..++|.|+++++++++..
T Consensus 115 ~qt~~~~~~gv~filk~~~n------------~k~l~~gGHSaGAHLa~qav~R~-------r~prI~gl~l~~GvY~l~ 175 (270)
T KOG4627|consen 115 EQTMTQFTHGVNFILKYTEN------------TKVLTFGGHSAGAHLAAQAVMRQ-------RSPRIWGLILLCGVYDLR 175 (270)
T ss_pred HHHHHHHHHHHHHHHHhccc------------ceeEEEcccchHHHHHHHHHHHh-------cCchHHHHHHHhhHhhHH
Confidence 78899999999999887633 36799999999999999998873 568999999999998766
Q ss_pred ccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHH
Q 020406 204 VRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTL 281 (326)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l 281 (326)
......... +.-+ .......+|+....-.. . ..|+|++.|++| .+.+|.+.|+..+
T Consensus 176 EL~~te~g~--dlgL----------------t~~~ae~~Scdl~~~~~---v-~~~ilVv~~~~espklieQnrdf~~q~ 233 (270)
T KOG4627|consen 176 ELSNTESGN--DLGL----------------TERNAESVSCDLWEYTD---V-TVWILVVAAEHESPKLIEQNRDFADQL 233 (270)
T ss_pred HHhCCcccc--ccCc----------------ccchhhhcCccHHHhcC---c-eeeeeEeeecccCcHHHHhhhhHHHHh
Confidence 542222110 0000 11112223332221111 1 238999999999 6689999999999
Q ss_pred HHCCCcEEEEEeCCCceeeeecC
Q 020406 282 KNFGKKVEYVEFEGKQHGFFTID 304 (326)
Q Consensus 282 ~~~g~~~~l~~~~~~~H~~~~~~ 304 (326)
+++ ++..+++.+| |..+.
T Consensus 234 ~~a----~~~~f~n~~h-y~I~~ 251 (270)
T KOG4627|consen 234 RKA----SFTLFKNYDH-YDIIE 251 (270)
T ss_pred hhc----ceeecCCcch-hhHHH
Confidence 875 8999999999 55443
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=99.85 E-value=1.7e-19 Score=159.25 Aligned_cols=233 Identities=14% Similarity=0.084 Sum_probs=134.9
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC-------------c
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL-------------P 124 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~-------------~ 124 (326)
.+.+..+.|. .+.++||++||.+ ++... |..++..++.+ ||.|+++|+|+.+.+.. .
T Consensus 42 ~l~~~~~~~~----~~~~~vll~HG~~---~~~~~--y~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 42 PIRFVRFRAP----HHDRVVVICPGRI---ESYVK--YAELAYDLFHL-GYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred EEEEEEccCC----CCCcEEEEECCcc---chHHH--HHHHHHHHHHC-CCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 3455455443 2457899999753 33222 66777777765 99999999997765431 2
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcc
Q 020406 125 AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTV 204 (326)
Q Consensus 125 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~ 204 (326)
..++|+..+++.+... .+..+++++||||||.+|+.++.+ .++.++++|+.+|......
T Consensus 112 ~~~~d~~~~~~~~~~~-------------~~~~~~~l~GhSmGG~ia~~~a~~--------~p~~v~~lvl~~p~~~~~~ 170 (330)
T PRK10749 112 DYVDDLAAFWQQEIQP-------------GPYRKRYALAHSMGGAILTLFLQR--------HPGVFDAIALCAPMFGIVL 170 (330)
T ss_pred HHHHHHHHHHHHHHhc-------------CCCCCeEEEEEcHHHHHHHHHHHh--------CCCCcceEEEECchhccCC
Confidence 2344444444433221 234789999999999999999988 7889999999999764321
Q ss_pred cCCccc----------------------c-CCCccc------CCHHHHHHHHHhcCCCCCCC----CCCccCCC-C---C
Q 020406 205 RKKSEA----------------------E-GPREAF------LNLELIDRFWRLSIPIGETT----DHPLINPF-G---P 247 (326)
Q Consensus 205 ~~~~~~----------------------~-~~~~~~------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~---~ 247 (326)
...... . .....+ ............+....... ........ . .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T PRK10749 171 PLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQ 250 (330)
T ss_pred CCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHH
Confidence 100000 0 000000 00111111111111100000 00000000 0 0
Q ss_pred CCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCC---CcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 248 VSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFG---KKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 248 ~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g---~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
....... ...|+||+||++| ++.+.++.+++.+++++ .+++++++|+++|...... ....+++++.+.+||+
T Consensus 251 ~~~~~~~-i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~--~~~r~~v~~~i~~fl~ 327 (330)
T PRK10749 251 VLAGAGD-ITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEK--DAMRSVALNAIVDFFN 327 (330)
T ss_pred HHhhccC-CCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCC--cHHHHHHHHHHHHHHh
Confidence 0001111 1349999999999 55667788888887765 3568999999999655322 2346889999999998
Q ss_pred hc
Q 020406 323 EN 324 (326)
Q Consensus 323 ~~ 324 (326)
++
T Consensus 328 ~~ 329 (330)
T PRK10749 328 RH 329 (330)
T ss_pred hc
Confidence 76
No 17
>PLN02442 S-formylglutathione hydrolase
Probab=99.85 E-value=2.6e-19 Score=154.22 Aligned_cols=218 Identities=17% Similarity=0.163 Sum_probs=132.1
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCC-----C----------CC
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAP-----E----------NR 122 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~-----~----------~~ 122 (326)
.+.+.+|+|.....++.|+|+++||++ ++...+.....+.+++...|++|+.||....+ . ..
T Consensus 31 ~~~~~vy~P~~~~~~~~Pvv~~lHG~~---~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~ 107 (283)
T PLN02442 31 SMTFSVYFPPASDSGKVPVLYWLSGLT---CTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGF 107 (283)
T ss_pred ceEEEEEcCCcccCCCCCEEEEecCCC---cChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcce
Confidence 689999999854456789999999853 22221001111335555669999999964221 0 00
Q ss_pred C-----c-----hHHHHH-HHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCccee
Q 020406 123 L-----P-----AAIEDG-YMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVK 191 (326)
Q Consensus 123 ~-----~-----~~~~d~-~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~ 191 (326)
+ + ...+.+ .+...++.+... .+|.++++|+||||||++|+.++.+ +++.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~----------~~~~~~~~i~G~S~GG~~a~~~a~~--------~p~~~~ 169 (283)
T PLN02442 108 YLNATQEKWKNWRMYDYVVKELPKLLSDNFD----------QLDTSRASIFGHSMGGHGALTIYLK--------NPDKYK 169 (283)
T ss_pred eeccccCCCcccchhhhHHHHHHHHHHHHHH----------hcCCCceEEEEEChhHHHHHHHHHh--------CchhEE
Confidence 0 0 111112 223334444332 2677999999999999999999998 889999
Q ss_pred EEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCC--CCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCc
Q 020406 192 GYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGE--TTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDL 269 (326)
Q Consensus 192 ~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~ 269 (326)
++++++|..+..... ....... .+..... .......+++..... ..+|++++||++|.
T Consensus 170 ~~~~~~~~~~~~~~~-----------~~~~~~~----~~~g~~~~~~~~~d~~~~~~~~~~-----~~~pvli~~G~~D~ 229 (283)
T PLN02442 170 SVSAFAPIANPINCP-----------WGQKAFT----NYLGSDKADWEEYDATELVSKFND-----VSATILIDQGEADK 229 (283)
T ss_pred EEEEECCccCcccCc-----------hhhHHHH----HHcCCChhhHHHcChhhhhhhccc-----cCCCEEEEECCCCc
Confidence 999999987643110 0000111 1111110 000111222222211 14599999999994
Q ss_pred chh---hHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 270 LKD---RAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 270 ~~~---~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
.++ +++.+.+.+++.|.+++++++|+++|.|.. ...+++....|..+
T Consensus 230 ~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~-------~~~~i~~~~~~~~~ 279 (283)
T PLN02442 230 FLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFF-------IATFIDDHINHHAQ 279 (283)
T ss_pred cccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHH-------HHHHHHHHHHHHHH
Confidence 433 478899999999999999999999998763 23444444555443
No 18
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.83 E-value=5.7e-19 Score=159.47 Aligned_cols=233 Identities=16% Similarity=0.115 Sum_probs=136.4
Q ss_pred eeeeEecCCC--CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC--
Q 020406 48 WKDVVFDPVH--DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL-- 123 (326)
Q Consensus 48 ~~~v~~~~~~--~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~-- 123 (326)
.+.|+++..+ .+...++.|.. .++.|+||++||.+ +.... .|..++..++.+ ||.|+++|+|+.+.+..
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~--~~~~P~Vli~gG~~---~~~~~-~~~~~~~~La~~-Gy~vl~~D~pG~G~s~~~~ 240 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKG--DGPFPTVLVCGGLD---SLQTD-YYRLFRDYLAPR-GIAMLTIDMPSVGFSSKWK 240 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCC--CCCccEEEEeCCcc---cchhh-hHHHHHHHHHhC-CCEEEEECCCCCCCCCCCC
Confidence 4566665444 47888888874 36789888766532 21111 144556667665 99999999997665432
Q ss_pred --chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 124 --PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 124 --~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
.........+++++.+.. .+|.++|+++|||+||++|+.+|.. .+++++++|+++|.+.
T Consensus 241 ~~~d~~~~~~avld~l~~~~-----------~vd~~ri~l~G~S~GG~~Al~~A~~--------~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 241 LTQDSSLLHQAVLNALPNVP-----------WVDHTRVAAFGFRFGANVAVRLAYL--------EPPRLKAVACLGPVVH 301 (414)
T ss_pred ccccHHHHHHHHHHHHHhCc-----------ccCcccEEEEEEChHHHHHHHHHHh--------CCcCceEEEEECCccc
Confidence 112222346778887654 4788999999999999999999987 6679999999998764
Q ss_pred CcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCC---CCccCCCC-CCCCCcccCCCCcEEEEEcCcC--cchhhHH
Q 020406 202 GTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTD---HPLINPFG-PVSPSLEAVDLDPILVVVGGSD--LLKDRAE 275 (326)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~P~lii~G~~D--~~~~~~~ 275 (326)
........ . ..+.....+.+... +....... ........ .....+......|+|++||++| ++.++++
T Consensus 302 ~~~~~~~~--~---~~~p~~~~~~la~~-lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~ 375 (414)
T PRK05077 302 TLLTDPKR--Q---QQVPEMYLDVLASR-LGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSR 375 (414)
T ss_pred hhhcchhh--h---hhchHHHHHHHHHH-hCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHH
Confidence 21110000 0 00000011111111 11000000 00000000 0000011112459999999999 5565665
Q ss_pred HHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 276 DYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 276 ~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
.+++. ..+.+++++|+..| + +..+++++.+.+||+++
T Consensus 376 ~l~~~----~~~~~l~~i~~~~~-~-------e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 376 LIASS----SADGKLLEIPFKPV-Y-------RNFDKALQEISDWLEDR 412 (414)
T ss_pred HHHHh----CCCCeEEEccCCCc-c-------CCHHHHHHHHHHHHHHH
Confidence 44433 34568999999622 2 35689999999999875
No 19
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.83 E-value=3.9e-19 Score=153.46 Aligned_cols=236 Identities=20% Similarity=0.190 Sum_probs=136.7
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC---------CchHHH
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR---------LPAAIE 128 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~---------~~~~~~ 128 (326)
.+.+..+.+... +..+||++||.+...+. |..++..|+.+ ||.|+++|.|+.+.+. +.....
T Consensus 21 ~~~~~~~~~~~~---~~g~Vvl~HG~~Eh~~r-----y~~la~~l~~~-G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~ 91 (298)
T COG2267 21 RLRYRTWAAPEP---PKGVVVLVHGLGEHSGR-----YEELADDLAAR-GFDVYALDLRGHGRSPRGQRGHVDSFADYVD 91 (298)
T ss_pred eEEEEeecCCCC---CCcEEEEecCchHHHHH-----HHHHHHHHHhC-CCEEEEecCCCCCCCCCCCcCCchhHHHHHH
Confidence 455556655542 33899999998655443 77788888877 9999999999876664 233344
Q ss_pred HHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcc--cC
Q 020406 129 DGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTV--RK 206 (326)
Q Consensus 129 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~--~~ 206 (326)
|+...++.+.... ...+++|+||||||.+|+.++.+ .+..++++|+.+|++.... ..
T Consensus 92 dl~~~~~~~~~~~-------------~~~p~~l~gHSmGg~Ia~~~~~~--------~~~~i~~~vLssP~~~l~~~~~~ 150 (298)
T COG2267 92 DLDAFVETIAEPD-------------PGLPVFLLGHSMGGLIALLYLAR--------YPPRIDGLVLSSPALGLGGAILR 150 (298)
T ss_pred HHHHHHHHHhccC-------------CCCCeEEEEeCcHHHHHHHHHHh--------CCccccEEEEECccccCChhHHH
Confidence 4444444443321 22789999999999999999999 7799999999999987763 10
Q ss_pred Cc--------cc-cCCCcccC--------CHHH--HHHHHHhcCCCCC----CCCCCccC---CCCCCCCC-cccCCCCc
Q 020406 207 KS--------EA-EGPREAFL--------NLEL--IDRFWRLSIPIGE----TTDHPLIN---PFGPVSPS-LEAVDLDP 259 (326)
Q Consensus 207 ~~--------~~-~~~~~~~~--------~~~~--~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~-~~~~~~~P 259 (326)
.. .. ..+...+- .... .......+..... .....+.. ........ .......|
T Consensus 151 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~P 230 (298)
T COG2267 151 LILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALP 230 (298)
T ss_pred HHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCC
Confidence 00 00 00000000 0000 0011111111000 00000000 00000000 01111339
Q ss_pred EEEEEcCcCcchhhHHHHHHHHHHCCC-cEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 260 ILVVVGGSDLLKDRAEDYAKTLKNFGK-KVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 260 ~lii~G~~D~~~~~~~~~~~~l~~~g~-~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
+||++|++|..++......+.++..+. +.++++|+|+.|...... .. ..+++++.+.+|+.++.
T Consensus 231 vLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~-~~-~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 231 VLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEP-DR-AREEVLKDILAWLAEAL 295 (298)
T ss_pred EEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCc-ch-HHHHHHHHHHHHHHhhc
Confidence 999999999333223334455555553 369999999999665432 11 12899999999998864
No 20
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.83 E-value=1.1e-18 Score=156.34 Aligned_cols=231 Identities=15% Similarity=0.134 Sum_probs=136.3
Q ss_pred CCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC--------chHHH
Q 020406 57 HDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL--------PAAIE 128 (326)
Q Consensus 57 ~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~--------~~~~~ 128 (326)
..+..+.|.|... ..+++||++||.+ ++... |..++..|+.+ ||.|+++|+|+.+.+.. ....+
T Consensus 121 ~~l~~~~~~p~~~--~~~~~Vl~lHG~~---~~~~~--~~~~a~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~ 192 (395)
T PLN02652 121 NALFCRSWAPAAG--EMRGILIIIHGLN---EHSGR--YLHFAKQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSLDYVVE 192 (395)
T ss_pred CEEEEEEecCCCC--CCceEEEEECCch---HHHHH--HHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCHHHHHH
Confidence 3567778888543 4578999999753 22221 66777888766 99999999997765332 23467
Q ss_pred HHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCc
Q 020406 129 DGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKS 208 (326)
Q Consensus 129 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~ 208 (326)
|+..+++++.... +..+++|+||||||.+++.++.+ . ..+++++++|+.+|++........
T Consensus 193 Dl~~~l~~l~~~~-------------~~~~i~lvGhSmGG~ial~~a~~---p---~~~~~v~glVL~sP~l~~~~~~~~ 253 (395)
T PLN02652 193 DTEAFLEKIRSEN-------------PGVPCFLFGHSTGGAVVLKAASY---P---SIEDKLEGIVLTSPALRVKPAHPI 253 (395)
T ss_pred HHHHHHHHHHHhC-------------CCCCEEEEEECHHHHHHHHHHhc---c---CcccccceEEEECcccccccchHH
Confidence 7788888887543 12479999999999999977643 0 012579999999998654321000
Q ss_pred c---------------ccCC--C-cccC-CHHHHHHHHHhcCCCCCCC-CCC--c----cCCCCCCCCCcccCCCCcEEE
Q 020406 209 E---------------AEGP--R-EAFL-NLELIDRFWRLSIPIGETT-DHP--L----INPFGPVSPSLEAVDLDPILV 262 (326)
Q Consensus 209 ~---------------~~~~--~-~~~~-~~~~~~~~~~~~~~~~~~~-~~~--~----~~~~~~~~~~~~~~~~~P~li 262 (326)
. .... . .... ..... ...+....... ... . ..........+... ..|+||
T Consensus 254 ~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~---~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I-~vPvLI 329 (395)
T PLN02652 254 VGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAAL---LAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSV-TVPFMV 329 (395)
T ss_pred HHHHHHHHHHhCCCCcccCcccccCCcCCCHHHH---HHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccC-CCCEEE
Confidence 0 0000 0 0000 00000 00000000000 000 0 00000000111112 349999
Q ss_pred EEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 263 VVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 263 i~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
+||++| ++.+.++++++++.. ...+++++++++|.... + ++.+++++.+.+||..+
T Consensus 330 i~G~~D~vvp~~~a~~l~~~~~~--~~k~l~~~~ga~H~l~~-e---~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 330 LHGTADRVTDPLASQDLYNEAAS--RHKDIKLYDGFLHDLLF-E---PEREEVGRDIIDWMEKR 387 (395)
T ss_pred EEeCCCCCCCHHHHHHHHHhcCC--CCceEEEECCCeEEecc-C---CCHHHHHHHHHHHHHHH
Confidence 999999 556677777777643 34588999999996543 2 35789999999999865
No 21
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.82 E-value=2.3e-19 Score=149.19 Aligned_cols=194 Identities=24% Similarity=0.270 Sum_probs=131.4
Q ss_pred eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCC--C-CC------------
Q 020406 59 LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPE--N-RL------------ 123 (326)
Q Consensus 59 ~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~--~-~~------------ 123 (326)
+...++.|++. ++.|+||++|+- .|-.. ....++.+|+.+ ||.|+.||+-.... . ..
T Consensus 1 ~~ay~~~P~~~--~~~~~Vvv~~d~---~G~~~--~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T PF01738_consen 1 IDAYVARPEGG--GPRPAVVVIHDI---FGLNP--NIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFA 72 (218)
T ss_dssp EEEEEEEETTS--SSEEEEEEE-BT---TBS-H--HHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHH
T ss_pred CeEEEEeCCCC--CCCCEEEEEcCC---CCCch--HHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHh
Confidence 35677888874 789999999974 33322 255678888877 99999999653322 1 10
Q ss_pred ---chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 124 ---PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 124 ---~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
.....|+..++++++++. .++.++|+++|+|+||.+|+.++.+ . +.+++++.++|..
T Consensus 73 ~~~~~~~~~~~aa~~~l~~~~-----------~~~~~kig~vGfc~GG~~a~~~a~~--------~-~~~~a~v~~yg~~ 132 (218)
T PF01738_consen 73 PRPEQVAADLQAAVDYLRAQP-----------EVDPGKIGVVGFCWGGKLALLLAAR--------D-PRVDAAVSFYGGS 132 (218)
T ss_dssp HSHHHHHHHHHHHHHHHHCTT-----------TCEEEEEEEEEETHHHHHHHHHHCC--------T-TTSSEEEEES-SS
T ss_pred hhHHHHHHHHHHHHHHHHhcc-----------ccCCCcEEEEEEecchHHhhhhhhh--------c-cccceEEEEcCCC
Confidence 123456677888888775 3567899999999999999999866 3 5899999999911
Q ss_pred CCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHH
Q 020406 201 GGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYA 278 (326)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~ 278 (326)
.... . ... ... ...|+++++|++| ++.+..+.+.
T Consensus 133 ~~~~---------------~--~~~----------------~~~-----------~~~P~l~~~g~~D~~~~~~~~~~~~ 168 (218)
T PF01738_consen 133 PPPP---------------P--LED----------------APK-----------IKAPVLILFGENDPFFPPEEVEALE 168 (218)
T ss_dssp SGGG---------------H--HHH----------------GGG-------------S-EEEEEETT-TTS-HHHHHHHH
T ss_pred CCCc---------------c--hhh----------------hcc-----------cCCCEeecCccCCCCCChHHHHHHH
Confidence 0000 0 000 000 0349999999999 4455667899
Q ss_pred HHHHHCCCcEEEEEeCCCceeeeecCCC---CHHHHHHHHHHHHHhhhc
Q 020406 279 KTLKNFGKKVEYVEFEGKQHGFFTIDPN---SEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 279 ~~l~~~g~~~~l~~~~~~~H~~~~~~~~---~~~~~~~~~~~~~fl~~~ 324 (326)
+.+++.+.++++++|+|++|+|...... .+..++.++++.+||++|
T Consensus 169 ~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 169 EALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred HHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999865532 356789999999999875
No 22
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=7e-19 Score=157.23 Aligned_cols=231 Identities=19% Similarity=0.119 Sum_probs=159.9
Q ss_pred eEecCCCCeEEEEEccCCC-CCCCCcEEEEEcCCccccCCCCCCcch--hHHHHHhhcCCcEEEeecCCCCCCCC--C--
Q 020406 51 VVFDPVHDLSLRLYKPALP-VSTKLPIFYYIHGGGFCIGSRTWPNCQ--NYCFKLASELQAVIISPDYRLAPENR--L-- 123 (326)
Q Consensus 51 v~~~~~~~~~~~~~~P~~~-~~~~~p~vv~~HGgg~~~~~~~~~~~~--~~~~~la~~~g~~vi~~d~r~~~~~~--~-- 123 (326)
.+.+++..+..-+|.|.+. +.++.|+++++.||.-..-..+..-+. -.+..|++. ||.|+.+|-|++.... |
T Consensus 618 fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl-Gy~Vv~IDnRGS~hRGlkFE~ 696 (867)
T KOG2281|consen 618 FQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL-GYVVVFIDNRGSAHRGLKFES 696 (867)
T ss_pred eecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhc-ceEEEEEcCCCccccchhhHH
Confidence 3446666677889999875 567789999999986643332221111 123456666 9999999999765322 1
Q ss_pred -------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEe
Q 020406 124 -------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILL 196 (326)
Q Consensus 124 -------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~ 196 (326)
...++|..+.++||.++.. -+|.+||+|.|||+||+++++++++ +|+.++.+|+-
T Consensus 697 ~ik~kmGqVE~eDQVeglq~Laeq~g----------fidmdrV~vhGWSYGGYLSlm~L~~--------~P~IfrvAIAG 758 (867)
T KOG2281|consen 697 HIKKKMGQVEVEDQVEGLQMLAEQTG----------FIDMDRVGVHGWSYGGYLSLMGLAQ--------YPNIFRVAIAG 758 (867)
T ss_pred HHhhccCeeeehhhHHHHHHHHHhcC----------cccchheeEeccccccHHHHHHhhc--------CcceeeEEecc
Confidence 2357899999999998863 3899999999999999999999999 99999999999
Q ss_pred ccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCC--CCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchh
Q 020406 197 APFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIG--ETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKD 272 (326)
Q Consensus 197 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~ 272 (326)
+|++++........ +.|.+-. ....+..-+-.... ..+-.. ...+|++||--| |...
T Consensus 759 apVT~W~~YDTgYT-----------------ERYMg~P~~nE~gY~agSV~~~V-eklpde-pnRLlLvHGliDENVHF~ 819 (867)
T KOG2281|consen 759 APVTDWRLYDTGYT-----------------ERYMGYPDNNEHGYGAGSVAGHV-EKLPDE-PNRLLLVHGLIDENVHFA 819 (867)
T ss_pred Ccceeeeeecccch-----------------hhhcCCCccchhcccchhHHHHH-hhCCCC-CceEEEEecccccchhhh
Confidence 99998765422111 1111111 01111111111111 110000 116999999999 7778
Q ss_pred hHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 273 RAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 273 ~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
+.-.+..+|.++|++.++++||++.|+.... +....+-.++..||++
T Consensus 820 Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~----es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 820 HTSRLVSALVKAGKPYELQIFPNERHSIRNP----ESGIYYEARLLHFLQE 866 (867)
T ss_pred hHHHHHHHHHhCCCceEEEEccccccccCCC----ccchhHHHHHHHHHhh
Confidence 8889999999999999999999999977643 3456667788888876
No 23
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.82 E-value=4.3e-18 Score=147.45 Aligned_cols=225 Identities=21% Similarity=0.309 Sum_probs=148.6
Q ss_pred CeEEEEEc-cCCCCCCCCcEEEEEcCCccccCCCCCCcchhHH---HHHhhcCCcEEEeecCCCCC----CCCCchHHHH
Q 020406 58 DLSLRLYK-PALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYC---FKLASELQAVIISPDYRLAP----ENRLPAAIED 129 (326)
Q Consensus 58 ~~~~~~~~-P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~---~~la~~~g~~vi~~d~r~~~----~~~~~~~~~d 129 (326)
....+++. |.....+..|+|||+|||||..+.... ...++ ..+.. ...++..||.+.+ +..+|.++.+
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~--qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~q 180 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPS--QIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQ 180 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHH--HHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHH
Confidence 34567776 765333557999999999998876542 22222 22333 3588889999887 7889999999
Q ss_pred HHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCC--
Q 020406 130 GYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKK-- 207 (326)
Q Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~-- 207 (326)
+.+.+++|.+... .++|+++|.|+||++++.++... .... ....++++|++|||+.......
T Consensus 181 lv~~Y~~Lv~~~G-------------~~nI~LmGDSAGGnL~Ls~LqyL--~~~~-~~~~Pk~~iLISPWv~l~~~~~~~ 244 (374)
T PF10340_consen 181 LVATYDYLVESEG-------------NKNIILMGDSAGGNLALSFLQYL--KKPN-KLPYPKSAILISPWVNLVPQDSQE 244 (374)
T ss_pred HHHHHHHHHhccC-------------CCeEEEEecCccHHHHHHHHHHH--hhcC-CCCCCceeEEECCCcCCcCCCCCC
Confidence 9999999985432 27999999999999999998872 2211 2356789999999998873221
Q ss_pred --ccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCC-----CCccc-CCCCcEEEEEcCcCcchhhHHHHHH
Q 020406 208 --SEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVS-----PSLEA-VDLDPILVVVGGSDLLKDRAEDYAK 279 (326)
Q Consensus 208 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~P~lii~G~~D~~~~~~~~~~~ 279 (326)
...+......+.......+...+.+...........++.... ..... ....-++|+.||++++.++.+++++
T Consensus 245 ~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~EvfrddI~~~~~ 324 (374)
T PF10340_consen 245 GSSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFRDDILEWAK 324 (374)
T ss_pred CccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccHHHHHHHHH
Confidence 111122233444444444555555542111112122211111 11111 1233799999999999999999999
Q ss_pred HHHHCCC-----cEEEEEeCCCceeeee
Q 020406 280 TLKNFGK-----KVEYVEFEGKQHGFFT 302 (326)
Q Consensus 280 ~l~~~g~-----~~~l~~~~~~~H~~~~ 302 (326)
++...+. ..++.+.+++.|....
T Consensus 325 ~~~~~~~~~~~~~~nv~~~~~G~Hi~P~ 352 (374)
T PF10340_consen 325 KLNDVKPNKFSNSNNVYIDEGGIHIGPI 352 (374)
T ss_pred HHhhcCccccCCcceEEEecCCccccch
Confidence 9986553 3688999999996543
No 24
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.81 E-value=4.3e-18 Score=148.69 Aligned_cols=243 Identities=16% Similarity=0.100 Sum_probs=133.9
Q ss_pred eeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCch-
Q 020406 47 VWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPA- 125 (326)
Q Consensus 47 ~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~- 125 (326)
..+.+.+..+++.+.++++.... ....|.|||+||.+ ++... |..++..|..+ ||.|+++|+|+.+.+..+.
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G-~~~~~~lvliHG~~---~~~~~--w~~~~~~L~~~-gy~vi~~Dl~G~G~S~~~~~ 92 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEG-PADGPPVLLLHGEP---SWSYL--YRKMIPILAAA-GHRVIAPDLIGFGRSDKPTR 92 (302)
T ss_pred CceeEeecCCCCceEEEEEEecC-CCCCCEEEEECCCC---Cchhh--HHHHHHHHHhC-CCEEEEECCCCCCCCCCCCC
Confidence 44667778766666666554432 12457999999753 22222 77777777655 8999999999876654321
Q ss_pred ----HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 126 ----AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 126 ----~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
..++..+.+..+.++ ++.++++++|||+||.+|+.++.+ +++++++++++++...
T Consensus 93 ~~~~~~~~~a~~l~~~l~~-------------l~~~~v~lvGhS~Gg~ia~~~a~~--------~p~~v~~lvl~~~~~~ 151 (302)
T PRK00870 93 REDYTYARHVEWMRSWFEQ-------------LDLTDVTLVCQDWGGLIGLRLAAE--------HPDRFARLVVANTGLP 151 (302)
T ss_pred cccCCHHHHHHHHHHHHHH-------------cCCCCEEEEEEChHHHHHHHHHHh--------ChhheeEEEEeCCCCC
Confidence 233333333322222 334689999999999999999998 8899999999987432
Q ss_pred Cccc--CC------cccc-CCC-----------cccCCHHHHHHHHHhcCCCCCCCC---CCccCCCCCCC---------
Q 020406 202 GTVR--KK------SEAE-GPR-----------EAFLNLELIDRFWRLSIPIGETTD---HPLINPFGPVS--------- 249 (326)
Q Consensus 202 ~~~~--~~------~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------- 249 (326)
.... .. .... ... ...........+............ ...........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (302)
T PRK00870 152 TGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAA 231 (302)
T ss_pred CccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHH
Confidence 1110 00 0000 000 000011111111000000000000 00000000000
Q ss_pred -CCcccCCCCcEEEEEcCcCcc-hhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 250 -PSLEAVDLDPILVVVGGSDLL-KDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 250 -~~~~~~~~~P~lii~G~~D~~-~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
..+ .....|+++++|++|.. ....+++++.+... ..+++.++++++|.... ++++++.+.+.+||++|
T Consensus 232 ~~~l-~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~-----e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 232 WAVL-ERWDKPFLTAFSDSDPITGGGDAILQKRIPGA-AGQPHPTIKGAGHFLQE-----DSGEELAEAVLEFIRAT 301 (302)
T ss_pred HHhh-hcCCCceEEEecCCCCcccCchHHHHhhcccc-cccceeeecCCCccchh-----hChHHHHHHHHHHHhcC
Confidence 001 11245999999999922 22335555555432 12348899999995432 56789999999999876
No 25
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=3.1e-18 Score=164.00 Aligned_cols=236 Identities=17% Similarity=0.150 Sum_probs=162.4
Q ss_pred CceeeeeEecCCCCeEEEEEccCCC-CCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC
Q 020406 45 SVVWKDVVFDPVHDLSLRLYKPALP-VSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL 123 (326)
Q Consensus 45 ~~~~~~v~~~~~~~~~~~~~~P~~~-~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~ 123 (326)
....+.+.+ ++-...+.+..|++. +.++.|+++.+|||......... .-..+...++...|++|+.+|+|+++...-
T Consensus 497 ~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~-~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~ 574 (755)
T KOG2100|consen 497 IVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSK-FSVDWNEVVVSSRGFAVLQVDGRGSGGYGW 574 (755)
T ss_pred cceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeee-EEecHHHHhhccCCeEEEEEcCCCcCCcch
Confidence 344455555 333456667888765 55688999999998542111111 123455667778899999999998765421
Q ss_pred -----------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCC-ccee
Q 020406 124 -----------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAP-VRVK 191 (326)
Q Consensus 124 -----------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~-~~i~ 191 (326)
...++|+..+++++.+.. .+|.+||.|+|+|+||++++.++.. .+ .-++
T Consensus 575 ~~~~~~~~~lG~~ev~D~~~~~~~~~~~~-----------~iD~~ri~i~GwSyGGy~t~~~l~~--------~~~~~fk 635 (755)
T KOG2100|consen 575 DFRSALPRNLGDVEVKDQIEAVKKVLKLP-----------FIDRSRVAIWGWSYGGYLTLKLLES--------DPGDVFK 635 (755)
T ss_pred hHHHHhhhhcCCcchHHHHHHHHHHHhcc-----------cccHHHeEEeccChHHHHHHHHhhh--------CcCceEE
Confidence 236788888888888876 4999999999999999999999988 43 7789
Q ss_pred EEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--c
Q 020406 192 GYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--L 269 (326)
Q Consensus 192 ~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~ 269 (326)
+.++++|++++.........+. .. .+......+...++....... ..+-.|++||+.| +
T Consensus 636 cgvavaPVtd~~~yds~~tery--------------mg-~p~~~~~~y~e~~~~~~~~~~----~~~~~LliHGt~DdnV 696 (755)
T KOG2100|consen 636 CGVAVAPVTDWLYYDSTYTERY--------------MG-LPSENDKGYEESSVSSPANNI----KTPKLLLIHGTEDDNV 696 (755)
T ss_pred EEEEecceeeeeeecccccHhh--------------cC-CCccccchhhhccccchhhhh----ccCCEEEEEcCCcCCc
Confidence 9999999998873222111110 00 000000001122222222221 1324699999999 7
Q ss_pred chhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 270 LKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 270 ~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
..+++..+.++|+.+|.++++.+||++.|++.... ....+...+..|+++|
T Consensus 697 h~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~----~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 697 HFQQSAILIKALQNAGVPFRLLVYPDENHGISYVE----VISHLYEKLDRFLRDC 747 (755)
T ss_pred CHHHHHHHHHHHHHCCCceEEEEeCCCCccccccc----chHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999887433 3467888888998765
No 26
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.81 E-value=7.1e-19 Score=137.71 Aligned_cols=237 Identities=17% Similarity=0.184 Sum_probs=163.2
Q ss_pred CCCCCCCCCCCCceeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEee
Q 020406 34 PSFSVPVHDDGSVVWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISP 113 (326)
Q Consensus 34 ~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~ 113 (326)
.+-..|.|....+..+.+++.+.|.++++-|.=.. +..+|+++++||.....|. ....+.-+..+.+..|+.+
T Consensus 40 sR~~vptP~~~n~pye~i~l~T~D~vtL~a~~~~~--E~S~pTlLyfh~NAGNmGh-----r~~i~~~fy~~l~mnv~iv 112 (300)
T KOG4391|consen 40 SRENVPTPKEFNMPYERIELRTRDKVTLDAYLMLS--ESSRPTLLYFHANAGNMGH-----RLPIARVFYVNLKMNVLIV 112 (300)
T ss_pred cccCCCCccccCCCceEEEEEcCcceeEeeeeecc--cCCCceEEEEccCCCcccc-----hhhHHHHHHHHcCceEEEE
Confidence 44456667778888999999999998888665443 3588999999997544444 3345666677889999999
Q ss_pred cCCCCCCCCC---ch-HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcc
Q 020406 114 DYRLAPENRL---PA-AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVR 189 (326)
Q Consensus 114 d~r~~~~~~~---~~-~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~ 189 (326)
+||+.+.+.. +. -..|..++++|+..+. ..|..+++++|.|.||.+|..+|.+ ..++
T Consensus 113 sYRGYG~S~GspsE~GL~lDs~avldyl~t~~-----------~~dktkivlfGrSlGGAvai~lask--------~~~r 173 (300)
T KOG4391|consen 113 SYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRP-----------DLDKTKIVLFGRSLGGAVAIHLASK--------NSDR 173 (300)
T ss_pred EeeccccCCCCccccceeccHHHHHHHHhcCc-----------cCCcceEEEEecccCCeeEEEeecc--------chhh
Confidence 9997554332 22 3568999999999886 6888999999999999999999988 6689
Q ss_pred eeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC-
Q 020406 190 VKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD- 268 (326)
Q Consensus 190 i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D- 268 (326)
+.++|+.+.+.+.........-.-....++....+..|. +. ...... ..|.|++.|.+|
T Consensus 174 i~~~ivENTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~--------------S~-~ki~~~-----~~P~LFiSGlkDe 233 (300)
T KOG4391|consen 174 ISAIIVENTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWL--------------SY-RKIGQC-----RMPFLFISGLKDE 233 (300)
T ss_pred eeeeeeechhccchhhhhheeccchhhHHHHHHHHhhhc--------------ch-hhhccc-----cCceEEeecCccc
Confidence 999999998876533211110000000111111110111 00 000011 339999999999
Q ss_pred -cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 269 -LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 269 -~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
+++.+.+++++..... ..++.+||++.|.-... .+-.++.+.+||.+.
T Consensus 234 lVPP~~Mr~Ly~~c~S~--~Krl~eFP~gtHNDT~i------~dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 234 LVPPVMMRQLYELCPSR--TKRLAEFPDGTHNDTWI------CDGYFQAIEDFLAEV 282 (300)
T ss_pred cCCcHHHHHHHHhCchh--hhhheeCCCCccCceEE------eccHHHHHHHHHHHh
Confidence 6666777777776544 34899999999965543 256788888888764
No 27
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=1.3e-17 Score=139.01 Aligned_cols=203 Identities=22% Similarity=0.265 Sum_probs=152.0
Q ss_pred eeeEecCCC-CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCC--CCCC----
Q 020406 49 KDVVFDPVH-DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRL--APEN---- 121 (326)
Q Consensus 49 ~~v~~~~~~-~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~--~~~~---- 121 (326)
+++.++..+ .+...+..|.+. ++.|+||++|+- .|-... ....+++||.+ ||.|++||+-. ....
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~--~~~P~VIv~hei---~Gl~~~--i~~~a~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~ 74 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGA--GGFPGVIVLHEI---FGLNPH--IRDVARRLAKA-GYVVLAPDLYGRQGDPTDIED 74 (236)
T ss_pred cceEeeCCCceEeEEEecCCcC--CCCCEEEEEecc---cCCchH--HHHHHHHHHhC-CcEEEechhhccCCCCCcccc
Confidence 445555554 688888999875 444999999963 343332 67888999888 99999999531 1110
Q ss_pred -------------CCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCc
Q 020406 122 -------------RLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPV 188 (326)
Q Consensus 122 -------------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~ 188 (326)
.....+.|+..+++||..+. .++..+|+++|+|+||.+|+.++.+ .+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~-----------~~~~~~ig~~GfC~GG~~a~~~a~~--------~~- 134 (236)
T COG0412 75 EPAELETGLVERVDPAEVLADIDAALDYLARQP-----------QVDPKRIGVVGFCMGGGLALLAATR--------AP- 134 (236)
T ss_pred cHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC-----------CCCCceEEEEEEcccHHHHHHhhcc--------cC-
Confidence 01356788999999999876 4777999999999999999999977 22
Q ss_pred ceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC
Q 020406 189 RVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD 268 (326)
Q Consensus 189 ~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D 268 (326)
.+++.+.++|......... . .....|+|+.+|+.|
T Consensus 135 ~v~a~v~fyg~~~~~~~~~----------------------------------------~-----~~~~~pvl~~~~~~D 169 (236)
T COG0412 135 EVKAAVAFYGGLIADDTAD----------------------------------------A-----PKIKVPVLLHLAGED 169 (236)
T ss_pred CccEEEEecCCCCCCcccc----------------------------------------c-----ccccCcEEEEecccC
Confidence 8999999998653211100 0 001449999999999
Q ss_pred --cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeec------CCCCHHHHHHHHHHHHHhhhc
Q 020406 269 --LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTI------DPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 269 --~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~------~~~~~~~~~~~~~~~~fl~~~ 324 (326)
++......+.+.+...+.++++.+|+++.|+|... ..+....++.++++.+|++++
T Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 170 PYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred CCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 55666788889999988899999999999999854 234467789999999999875
No 28
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.80 E-value=5.4e-19 Score=139.27 Aligned_cols=212 Identities=18% Similarity=0.146 Sum_probs=134.7
Q ss_pred cEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCC-------CCchHHHHHHHHHHHHHHHhhcCCCC
Q 020406 75 PIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPEN-------RLPAAIEDGYMAVKWLQAQAVANEPD 147 (326)
Q Consensus 75 p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~-------~~~~~~~d~~~~~~~l~~~~~~~~~~ 147 (326)
-+|+++|| | .|+... ...+.+.| ++.||.|.+|.|++.+.. ....++.|+.+++++|.+..
T Consensus 16 ~AVLllHG--F-TGt~~D--vr~Lgr~L-~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~g------ 83 (243)
T COG1647 16 RAVLLLHG--F-TGTPRD--VRMLGRYL-NENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAG------ 83 (243)
T ss_pred EEEEEEec--c-CCCcHH--HHHHHHHH-HHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcC------
Confidence 78999995 5 455552 44444545 455999999999987643 24568999999999999654
Q ss_pred cccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCcc-------ccCCCcccCCH
Q 020406 148 TWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSE-------AEGPREAFLNL 220 (326)
Q Consensus 148 ~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~-------~~~~~~~~~~~ 220 (326)
-+.|.+.|.||||.+|+.+|.+ -.+++++.+|+.+......... .+.....-.+.
T Consensus 84 --------y~eI~v~GlSmGGv~alkla~~----------~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~ 145 (243)
T COG1647 84 --------YDEIAVVGLSMGGVFALKLAYH----------YPPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQ 145 (243)
T ss_pred --------CCeEEEEeecchhHHHHHHHhh----------CCccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCH
Confidence 1699999999999999999988 3489999999766532211100 01111122223
Q ss_pred HHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCce
Q 020406 221 ELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQH 298 (326)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H 298 (326)
+..+.....+..............+......++.+ ..|++|++|++| ++.+.+..+.+.+... +.++.+|++.+|
T Consensus 146 e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I-~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~--~KeL~~~e~SgH 222 (243)
T COG1647 146 EQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKI-YSPTLVVQGRQDEMVPAESANFIYDHVESD--DKELKWLEGSGH 222 (243)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhc-ccchhheecccCCCCCHHHHHHHHHhccCC--cceeEEEccCCc
Confidence 33333222222100000000000000111111212 339999999999 6666777777777544 459999999999
Q ss_pred eeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 299 GFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
..... .+.+++.+.+..||++
T Consensus 223 VIt~D----~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 223 VITLD----KERDQVEEDVITFLEK 243 (243)
T ss_pred eeecc----hhHHHHHHHHHHHhhC
Confidence 77743 5889999999999974
No 29
>PRK11460 putative hydrolase; Provisional
Probab=99.79 E-value=1.8e-17 Score=138.70 Aligned_cols=159 Identities=16% Similarity=0.118 Sum_probs=105.2
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcC-CcEEEeecCCCC---C-CC--------CCchHHHH-------HH
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASEL-QAVIISPDYRLA---P-EN--------RLPAAIED-------GY 131 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~-g~~vi~~d~r~~---~-~~--------~~~~~~~d-------~~ 131 (326)
.+.|+||++||.|- +... +...+..+.... .+.++.++.+.. + .. .......+ +.
T Consensus 14 ~~~~~vIlLHG~G~---~~~~--~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 14 PAQQLLLLFHGVGD---NPVA--MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCCcEEEEEeCCCC---ChHH--HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHH
Confidence 46799999998643 3322 566777776542 356666664311 0 00 00111112 22
Q ss_pred HHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCcccc
Q 020406 132 MAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAE 211 (326)
Q Consensus 132 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~ 211 (326)
+.++++.++. .++.++|+++|||+||.+++.++.+ .+..+.+++.+++.+....
T Consensus 89 ~~i~~~~~~~-----------~~~~~~i~l~GfS~Gg~~al~~a~~--------~~~~~~~vv~~sg~~~~~~------- 142 (232)
T PRK11460 89 ETVRYWQQQS-----------GVGASATALIGFSQGAIMALEAVKA--------EPGLAGRVIAFSGRYASLP------- 142 (232)
T ss_pred HHHHHHHHhc-----------CCChhhEEEEEECHHHHHHHHHHHh--------CCCcceEEEEecccccccc-------
Confidence 2333333332 4777899999999999999999887 6677788888876431000
Q ss_pred CCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEE
Q 020406 212 GPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVE 289 (326)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~ 289 (326)
. .. . ..+|++++||++| ++.+.++++++++++.+.+++
T Consensus 143 -------------------------~----~~------~-----~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~ 182 (232)
T PRK11460 143 -------------------------E----TA------P-----TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVT 182 (232)
T ss_pred -------------------------c----cc------c-----CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeE
Confidence 0 00 0 0349999999999 677889999999999999999
Q ss_pred EEEeCCCceeee
Q 020406 290 YVEFEGKQHGFF 301 (326)
Q Consensus 290 l~~~~~~~H~~~ 301 (326)
+++|++++|.+.
T Consensus 183 ~~~~~~~gH~i~ 194 (232)
T PRK11460 183 LDIVEDLGHAID 194 (232)
T ss_pred EEEECCCCCCCC
Confidence 999999999775
No 30
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.78 E-value=7.2e-18 Score=136.87 Aligned_cols=211 Identities=18% Similarity=0.230 Sum_probs=141.9
Q ss_pred CceeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC-
Q 020406 45 SVVWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL- 123 (326)
Q Consensus 45 ~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~- 123 (326)
.+....+....++.+....+.|.. ...++++|.||...-.| .-..+...+....++.++.+||++.+.+..
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~---~~~~~lly~hGNa~Dlg-----q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ 105 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE---AAHPTLLYSHGNAADLG-----QMVELFKELSIFLNCNVVSYDYSGYGRSSGK 105 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc---ccceEEEEcCCcccchH-----HHHHHHHHHhhcccceEEEEecccccccCCC
Confidence 444444444555455555566554 36699999998744333 134566677777799999999997654332
Q ss_pred ---chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 124 ---PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 124 ---~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
-...+|+.++++||++.. + ..++|+|+|+|+|...++.+|.+ .+ +.++||.+|+.
T Consensus 106 psE~n~y~Di~avye~Lr~~~-----------g-~~~~Iil~G~SiGt~~tv~Lasr--------~~--~~alVL~SPf~ 163 (258)
T KOG1552|consen 106 PSERNLYADIKAVYEWLRNRY-----------G-SPERIILYGQSIGTVPTVDLASR--------YP--LAAVVLHSPFT 163 (258)
T ss_pred cccccchhhHHHHHHHHHhhc-----------C-CCceEEEEEecCCchhhhhHhhc--------CC--cceEEEeccch
Confidence 247899999999999986 3 55899999999999999999998 33 99999999998
Q ss_pred CCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHH
Q 020406 201 GGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYA 278 (326)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~ 278 (326)
+............ ..+ ....-+...... ..|+||+||+.| +...++.++.
T Consensus 164 S~~rv~~~~~~~~--~~~---------------------d~f~~i~kI~~i-----~~PVLiiHgtdDevv~~sHg~~Ly 215 (258)
T KOG1552|consen 164 SGMRVAFPDTKTT--YCF---------------------DAFPNIEKISKI-----TCPVLIIHGTDDEVVDFSHGKALY 215 (258)
T ss_pred hhhhhhccCcceE--Eee---------------------ccccccCcceec-----cCCEEEEecccCceecccccHHHH
Confidence 7654322110000 000 000001111111 349999999999 6677888899
Q ss_pred HHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 279 KTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 279 ~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
++.+.. ++-.+..|++|...... .+++..+.+|+.
T Consensus 216 e~~k~~---~epl~v~g~gH~~~~~~------~~yi~~l~~f~~ 250 (258)
T KOG1552|consen 216 ERCKEK---VEPLWVKGAGHNDIELY------PEYIEHLRRFIS 250 (258)
T ss_pred Hhcccc---CCCcEEecCCCcccccC------HHHHHHHHHHHH
Confidence 888654 67888899999655333 466666666654
No 31
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.78 E-value=1.8e-17 Score=144.27 Aligned_cols=99 Identities=21% Similarity=0.197 Sum_probs=71.7
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc----------hHHHHHHHHHHHHHHHhhc
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP----------AAIEDGYMAVKWLQAQAVA 143 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~----------~~~~d~~~~~~~l~~~~~~ 143 (326)
.|.||++||.+ ++... |...+..|+.+ +.|+++|+++.+.+..+ ..++|..+.+.-+.+.
T Consensus 29 ~~~vlllHG~~---~~~~~--w~~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~--- 98 (294)
T PLN02824 29 GPALVLVHGFG---GNADH--WRKNTPVLAKS--HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD--- 98 (294)
T ss_pred CCeEEEECCCC---CChhH--HHHHHHHHHhC--CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHH---
Confidence 37899999753 22232 77778888755 69999999987765432 2344444433333322
Q ss_pred CCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 144 NEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 144 ~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
+..++++++||||||.+++.+|.+ +|++++++|+++|..
T Consensus 99 ----------l~~~~~~lvGhS~Gg~va~~~a~~--------~p~~v~~lili~~~~ 137 (294)
T PLN02824 99 ----------VVGDPAFVICNSVGGVVGLQAAVD--------APELVRGVMLINISL 137 (294)
T ss_pred ----------hcCCCeEEEEeCHHHHHHHHHHHh--------ChhheeEEEEECCCc
Confidence 223789999999999999999999 889999999999754
No 32
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.77 E-value=2.2e-17 Score=136.56 Aligned_cols=181 Identities=18% Similarity=0.142 Sum_probs=113.0
Q ss_pred EEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCC-------------CCchHHH
Q 020406 62 RLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPEN-------------RLPAAIE 128 (326)
Q Consensus 62 ~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~-------------~~~~~~~ 128 (326)
.+|.|++. .++.|+||++||+|....... .......++.+.|++|++||++..... .......
T Consensus 2 ~ly~P~~~-~~~~P~vv~lHG~~~~~~~~~---~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T TIGR01840 2 YVYVPAGL-TGPRALVLALHGCGQTASAYV---IDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVE 77 (212)
T ss_pred EEEcCCCC-CCCCCEEEEeCCCCCCHHHHh---hhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHH
Confidence 57889874 467899999999865432211 001145567777999999999864311 0122456
Q ss_pred HHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCc
Q 020406 129 DGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKS 208 (326)
Q Consensus 129 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~ 208 (326)
|+..+++++.++. .+|++||+|+|||+||.+++.++.+ +++.+.+++.+++..........
T Consensus 78 ~~~~~i~~~~~~~-----------~id~~~i~l~G~S~Gg~~a~~~a~~--------~p~~~~~~~~~~g~~~~~~~~~~ 138 (212)
T TIGR01840 78 SLHQLIDAVKANY-----------SIDPNRVYVTGLSAGGGMTAVLGCT--------YPDVFAGGASNAGLPYGEASSSI 138 (212)
T ss_pred HHHHHHHHHHHhc-----------CcChhheEEEEECHHHHHHHHHHHh--------CchhheEEEeecCCcccccccch
Confidence 7778888887753 5888999999999999999999998 78899999999875422111000
Q ss_pred cccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHC
Q 020406 209 EAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNF 284 (326)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~ 284 (326)
...................... .. ......+|++|+||++| ++.+.++++.+++++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 139 SATPQMCTAATAASVCRLVRGM---------------QS----EYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred hhHhhcCCCCCHHHHHHHHhcc---------------CC----cccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 0000000000000000000000 00 00112457889999999 6788899999999875
No 33
>PLN00021 chlorophyllase
Probab=99.77 E-value=1.8e-16 Score=137.50 Aligned_cols=131 Identities=21% Similarity=0.357 Sum_probs=94.0
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHH
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWL 137 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l 137 (326)
.+.+.+|.|... ++.|+|||+||+++. ... |...+..|+++ ||.|+++|++..........++|+.++++|+
T Consensus 38 ~~p~~v~~P~~~--g~~PvVv~lHG~~~~---~~~--y~~l~~~Las~-G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l 109 (313)
T PLN00021 38 PKPLLVATPSEA--GTYPVLLFLHGYLLY---NSF--YSQLLQHIASH-GFIVVAPQLYTLAGPDGTDEIKDAAAVINWL 109 (313)
T ss_pred CceEEEEeCCCC--CCCCEEEEECCCCCC---ccc--HHHHHHHHHhC-CCEEEEecCCCcCCCCchhhHHHHHHHHHHH
Confidence 689999999764 788999999987543 222 66777778766 9999999977533223445677888889999
Q ss_pred HHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC
Q 020406 138 QAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 138 ~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~ 202 (326)
.+....+... ...+|.++++|+|||+||.+|+.++.+. .....+.+++++|+++|+...
T Consensus 110 ~~~l~~~l~~---~~~~d~~~v~l~GHS~GG~iA~~lA~~~---~~~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 110 SSGLAAVLPE---GVRPDLSKLALAGHSRGGKTAFALALGK---AAVSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred Hhhhhhhccc---ccccChhheEEEEECcchHHHHHHHhhc---cccccccceeeEEeecccccc
Confidence 8754321100 0136778999999999999999999871 111122578999999997643
No 34
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.77 E-value=3.3e-17 Score=141.62 Aligned_cols=212 Identities=18% Similarity=0.176 Sum_probs=114.9
Q ss_pred CCcEEEEEcCCccccCCCCCCcch---hHHHHHhhcCCcEEEeecCCCCCCCCCch-----HHHHHHHHHHHHHHHhhcC
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQ---NYCFKLASELQAVIISPDYRLAPENRLPA-----AIEDGYMAVKWLQAQAVAN 144 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~---~~~~~la~~~g~~vi~~d~r~~~~~~~~~-----~~~d~~~~~~~l~~~~~~~ 144 (326)
+.|.||++||.|. +... |. ..+..++.+ ||.|+++|+|+.+.+..+. ....+.++.+.+ +.
T Consensus 29 ~~~~ivllHG~~~---~~~~--~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l-~~---- 97 (282)
T TIGR03343 29 NGEAVIMLHGGGP---GAGG--WSNYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLM-DA---- 97 (282)
T ss_pred CCCeEEEECCCCC---chhh--HHHHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHH-HH----
Confidence 4478999998532 2111 32 234455555 8999999999877664321 111112222222 21
Q ss_pred CCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccC-Ccc-------cc---CC
Q 020406 145 EPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRK-KSE-------AE---GP 213 (326)
Q Consensus 145 ~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~-~~~-------~~---~~ 213 (326)
++.++++++||||||.+++.++.+ +|++++++|+++|........ ... .. ..
T Consensus 98 ---------l~~~~~~lvG~S~Gg~ia~~~a~~--------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
T TIGR03343 98 ---------LDIEKAHLVGNSMGGATALNFALE--------YPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEP 160 (282)
T ss_pred ---------cCCCCeeEEEECchHHHHHHHHHh--------ChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCC
Confidence 445799999999999999999998 889999999998753211000 000 00 00
Q ss_pred Cc--------------ccCCHHHHHHHHHhcCCCCCCC-C---CCccCCCCC--CCCCcccCCCCcEEEEEcCcC--cch
Q 020406 214 RE--------------AFLNLELIDRFWRLSIPIGETT-D---HPLINPFGP--VSPSLEAVDLDPILVVVGGSD--LLK 271 (326)
Q Consensus 214 ~~--------------~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~--~~~~~~~~~~~P~lii~G~~D--~~~ 271 (326)
.. ...........+.......... . .....+... ....+. ....|+|+++|++| ++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~Pvlli~G~~D~~v~~ 239 (282)
T TIGR03343 161 SYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLG-EIKAKTLVTWGRDDRFVPL 239 (282)
T ss_pred CHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHh-hCCCCEEEEEccCCCcCCc
Confidence 00 0000000000000000000000 0 000000000 000111 12349999999999 445
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 272 DRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 272 ~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
+.++++++.+ .+++++++++++|.... ++++.+.+.+.+||+
T Consensus 240 ~~~~~~~~~~----~~~~~~~i~~agH~~~~-----e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 240 DHGLKLLWNM----PDAQLHVFSRCGHWAQW-----EHADAFNRLVIDFLR 281 (282)
T ss_pred hhHHHHHHhC----CCCEEEEeCCCCcCCcc-----cCHHHHHHHHHHHhh
Confidence 5566665554 35799999999995443 567889999999986
No 35
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.77 E-value=2.8e-17 Score=139.88 Aligned_cols=214 Identities=15% Similarity=0.127 Sum_probs=117.1
Q ss_pred CCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc------hHHHHHHHHHHHHHHHhhcC
Q 020406 71 STKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP------AAIEDGYMAVKWLQAQAVAN 144 (326)
Q Consensus 71 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~------~~~~d~~~~~~~l~~~~~~~ 144 (326)
.++.|+||++||. .++... |..++..|+. +|.|+.+|+|+.+.+..+ ...+|+..+++.
T Consensus 13 ~~~~~~iv~lhG~---~~~~~~--~~~~~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~-------- 77 (255)
T PRK10673 13 PHNNSPIVLVHGL---FGSLDN--LGVLARDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDA-------- 77 (255)
T ss_pred CCCCCCEEEECCC---CCchhH--HHHHHHHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH--------
Confidence 3567999999975 233332 6667777754 599999999987654332 223333333332
Q ss_pred CCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCccc--CCcc----ccCCCcccC
Q 020406 145 EPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVR--KKSE----AEGPREAFL 218 (326)
Q Consensus 145 ~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~--~~~~----~~~~~~~~~ 218 (326)
++.++++|+|||+||.+|+.+|.+ .+++++++|++++....... .... .........
T Consensus 78 ---------l~~~~~~lvGhS~Gg~va~~~a~~--------~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
T PRK10673 78 ---------LQIEKATFIGHSMGGKAVMALTAL--------APDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGAT 140 (255)
T ss_pred ---------cCCCceEEEEECHHHHHHHHHHHh--------CHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccc
Confidence 223689999999999999999988 78899999998632111000 0000 000000000
Q ss_pred CHHHHHHHHHhcCCC---------C-CCCCCCccCC-----CCC--CCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHH
Q 020406 219 NLELIDRFWRLSIPI---------G-ETTDHPLINP-----FGP--VSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTL 281 (326)
Q Consensus 219 ~~~~~~~~~~~~~~~---------~-~~~~~~~~~~-----~~~--~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l 281 (326)
........+...... . .........+ ... ....+. ....|+|+++|++|.... ....+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~l~i~G~~D~~~~--~~~~~~~ 217 (255)
T PRK10673 141 TRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIP-AWPHPALFIRGGNSPYVT--EAYRDDL 217 (255)
T ss_pred cHHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccC-CCCCCeEEEECCCCCCCC--HHHHHHH
Confidence 000000011100000 0 0000000000 000 000011 113499999999994332 1244444
Q ss_pred HHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 282 KNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 282 ~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
.+...+++++++++++|.... ++++++.+.+.+||.++
T Consensus 218 ~~~~~~~~~~~~~~~gH~~~~-----~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 218 LAQFPQARAHVIAGAGHWVHA-----EKPDAVLRAIRRYLNDK 255 (255)
T ss_pred HHhCCCcEEEEeCCCCCeeec-----cCHHHHHHHHHHHHhcC
Confidence 444456799999999995543 45788999999999864
No 36
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.76 E-value=2e-17 Score=128.33 Aligned_cols=143 Identities=25% Similarity=0.326 Sum_probs=104.9
Q ss_pred EEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccC
Q 020406 76 IFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVAD 155 (326)
Q Consensus 76 ~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d 155 (326)
+||++||++. +.. .+..++..++++ ||.|+.+|++..... ....++.++++++.... .|
T Consensus 1 ~vv~~HG~~~---~~~--~~~~~~~~l~~~-G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------------~~ 59 (145)
T PF12695_consen 1 VVVLLHGWGG---SRR--DYQPLAEALAEQ-GYAVVAFDYPGHGDS---DGADAVERVLADIRAGY------------PD 59 (145)
T ss_dssp EEEEECTTTT---TTH--HHHHHHHHHHHT-TEEEEEESCTTSTTS---HHSHHHHHHHHHHHHHH------------CT
T ss_pred CEEEECCCCC---CHH--HHHHHHHHHHHC-CCEEEEEecCCCCcc---chhHHHHHHHHHHHhhc------------CC
Confidence 5899998754 333 267778888877 999999999987665 34446666777765432 36
Q ss_pred CCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCC
Q 020406 156 FGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGE 235 (326)
Q Consensus 156 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (326)
.++|+++|||+||.+++.++.+ . .+++++|+++|+.+...
T Consensus 60 ~~~i~l~G~S~Gg~~a~~~~~~--------~-~~v~~~v~~~~~~~~~~------------------------------- 99 (145)
T PF12695_consen 60 PDRIILIGHSMGGAIAANLAAR--------N-PRVKAVVLLSPYPDSED------------------------------- 99 (145)
T ss_dssp CCEEEEEEETHHHHHHHHHHHH--------S-TTESEEEEESESSGCHH-------------------------------
T ss_pred CCcEEEEEEccCcHHHHHHhhh--------c-cceeEEEEecCccchhh-------------------------------
Confidence 7999999999999999999988 5 89999999999421000
Q ss_pred CCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCcee
Q 020406 236 TTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHG 299 (326)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~ 299 (326)
... ...|+++++|++| ++.++.++++++++ .+.++++++|++|.
T Consensus 100 ------~~~-----------~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 ------LAK-----------IRIPVLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp ------HTT-----------TTSEEEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred ------hhc-----------cCCcEEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 000 0239999999999 44566777777765 56799999999993
No 37
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.76 E-value=5.1e-17 Score=139.61 Aligned_cols=240 Identities=19% Similarity=0.242 Sum_probs=132.7
Q ss_pred eeeEecCCC-CeEEEEEccCCCCCCCCcEEEEEcCCc-cccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC----
Q 020406 49 KDVVFDPVH-DLSLRLYKPALPVSTKLPIFYYIHGGG-FCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR---- 122 (326)
Q Consensus 49 ~~v~~~~~~-~~~~~~~~P~~~~~~~~p~vv~~HGgg-~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~---- 122 (326)
+.+.+...+ .+...++.|.+. +.+.||++|||+ +..+.... +..++..|+.+ ||.|+++|+++.+.+.
T Consensus 3 ~~~~~~~~~~~l~g~~~~p~~~---~~~~vv~i~gg~~~~~g~~~~--~~~la~~l~~~-G~~v~~~Dl~G~G~S~~~~~ 76 (274)
T TIGR03100 3 RALTFSCEGETLVGVLHIPGAS---HTTGVLIVVGGPQYRVGSHRQ--FVLLARRLAEA-GFPVLRFDYRGMGDSEGENL 76 (274)
T ss_pred eeEEEEcCCcEEEEEEEcCCCC---CCCeEEEEeCCccccCCchhH--HHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCC
Confidence 345555443 466678888653 335666666653 33344332 44556667665 9999999999766532
Q ss_pred -CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 123 -LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 123 -~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
+....+|+.++++++++... ..++|+++|||+||.+++.++.. . .+++++|+++|++.
T Consensus 77 ~~~~~~~d~~~~~~~l~~~~~------------g~~~i~l~G~S~Gg~~a~~~a~~--------~-~~v~~lil~~p~~~ 135 (274)
T TIGR03100 77 GFEGIDADIAAAIDAFREAAP------------HLRRIVAWGLCDAASAALLYAPA--------D-LRVAGLVLLNPWVR 135 (274)
T ss_pred CHHHHHHHHHHHHHHHHhhCC------------CCCcEEEEEECHHHHHHHHHhhh--------C-CCccEEEEECCccC
Confidence 23456788899999876531 22689999999999999998755 2 67999999999754
Q ss_pred CcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCC------------CCccCC--CCC-----CCCCcccCCCCcEEE
Q 020406 202 GTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTD------------HPLINP--FGP-----VSPSLEAVDLDPILV 262 (326)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~--~~~-----~~~~~~~~~~~P~li 262 (326)
.......... ...+........+|........... .....+ ... ....+... ..|+++
T Consensus 136 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~P~ll 212 (274)
T TIGR03100 136 TEAAQAASRI--RHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERF-QGPVLF 212 (274)
T ss_pred CcccchHHHH--HHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhc-CCcEEE
Confidence 3221000000 0000000000011121111100000 000000 000 00011122 449999
Q ss_pred EEcCcCcchhhHHHH---HHHHHH-C-CCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 263 VVGGSDLLKDRAEDY---AKTLKN-F-GKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 263 i~G~~D~~~~~~~~~---~~~l~~-~-g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
++|+.|...+...+. ..+..+ . ..++++..+++++|... ..+..+++.+.+.+||+
T Consensus 213 ~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~----~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 213 ILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFS----DRVWREWVAARTTEWLR 273 (274)
T ss_pred EEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccc----cHHHHHHHHHHHHHHHh
Confidence 999999443222110 022222 1 25689999999999443 22466889999999996
No 38
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.76 E-value=6.6e-18 Score=148.82 Aligned_cols=174 Identities=22% Similarity=0.272 Sum_probs=132.3
Q ss_pred ceeecccccEEEeeCCcEEecCCCCCCCCC-------CCCCC----------------------ceeeeeEecCCCCeEE
Q 020406 11 SLVDECRGVLFVYSDGSIVRLPKPSFSVPV-------HDDGS----------------------VVWKDVVFDPVHDLSL 61 (326)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~----------------------~~~~~v~~~~~~~~~~ 61 (326)
.++.+..|++.......+.+|++.|++.|+ ++... ....+....+.|++.+
T Consensus 3 ~~~~t~~G~~~g~~~~~v~~w~GIpYA~pPvG~~Rfr~p~~~~~w~~~rda~~~gp~~~Q~~~~~~~~~~~~~sEDCL~L 82 (491)
T COG2272 3 PVAETTTGKVEGITVNGVHSWLGIPYAAPPVGELRFRRPVPPEPWSGVRDATQFGPACPQPFNRMGSGEDFTGSEDCLYL 82 (491)
T ss_pred ceeecccceeecccccceeEEeecccCCCCCCcccccCCCCCcCCCcccchhccCCCCCCccccccccccCCccccceeE
Confidence 467788899999999999999999999976 11111 1111111345678999
Q ss_pred EEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC-------------CchHHH
Q 020406 62 RLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR-------------LPAAIE 128 (326)
Q Consensus 62 ~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~-------------~~~~~~ 128 (326)
+||.|+ .+.++.|||||||||+|..|+...+.|. -..|+++.+++|++++||+..... -...+.
T Consensus 83 NIwaP~-~~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~ 159 (491)
T COG2272 83 NIWAPE-VPAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLL 159 (491)
T ss_pred EeeccC-CCCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHH
Confidence 999999 3357789999999999999987754343 356888744999999999653211 124789
Q ss_pred HHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 129 DGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 129 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
|+..+++|++++...+| .|+++|-|+|+|+||+.++.++.- + .....+..+|+.||...
T Consensus 160 DqilALkWV~~NIe~FG--------GDp~NVTl~GeSAGa~si~~Lla~---P---~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 160 DQILALKWVRDNIEAFG--------GDPQNVTLFGESAGAASILTLLAV---P---SAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHhC--------CCccceEEeeccchHHHHHHhhcC---c---cchHHHHHHHHhCCCCC
Confidence 99999999999999987 888999999999999999998754 1 12356888888888764
No 39
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.76 E-value=7.5e-17 Score=133.72 Aligned_cols=113 Identities=26% Similarity=0.421 Sum_probs=81.9
Q ss_pred ccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCC
Q 020406 153 VADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIP 232 (326)
Q Consensus 153 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (326)
.++++||+++|+|+||.+|+.++.+ .+..+.|+|.+++++-........
T Consensus 101 ~i~~~ri~l~GFSQGa~~al~~~l~--------~p~~~~gvv~lsG~~~~~~~~~~~----------------------- 149 (216)
T PF02230_consen 101 GIDPSRIFLGGFSQGAAMALYLALR--------YPEPLAGVVALSGYLPPESELEDR----------------------- 149 (216)
T ss_dssp T--GGGEEEEEETHHHHHHHHHHHC--------TSSTSSEEEEES---TTGCCCHCC-----------------------
T ss_pred CCChhheehhhhhhHHHHHHHHHHH--------cCcCcCEEEEeecccccccccccc-----------------------
Confidence 4888999999999999999999998 788999999999976432110000
Q ss_pred CCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHH
Q 020406 233 IGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDA 310 (326)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~ 310 (326)
.. .. ...|++++||+.| ++.+.++...+.|++.+.+++++.|++++|...
T Consensus 150 ---------~~---~~-------~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~--------- 201 (216)
T PF02230_consen 150 ---------PE---AL-------AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS--------- 201 (216)
T ss_dssp ---------HC---CC-------CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----------
T ss_pred ---------cc---cc-------CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC---------
Confidence 00 00 0239999999999 667789999999999999999999999999654
Q ss_pred HHHHHHHHHHhhhc
Q 020406 311 NRLMQIIKHFIAEN 324 (326)
Q Consensus 311 ~~~~~~~~~fl~~~ 324 (326)
.+.+..+.+||++|
T Consensus 202 ~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 202 PEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 57788899999875
No 40
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.75 E-value=1.9e-17 Score=142.78 Aligned_cols=213 Identities=19% Similarity=0.191 Sum_probs=116.8
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCch---HHHHHHHHHHHHHHHhhcCCCCccc
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPA---AIEDGYMAVKWLQAQAVANEPDTWL 150 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~~ 150 (326)
.+.|||+||.| ++... |..++..|.. +|.|+++|+|+.+.+..+. .+++..+.+.-+.+.
T Consensus 25 ~~plvllHG~~---~~~~~--w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~---------- 87 (276)
T TIGR02240 25 LTPLLIFNGIG---ANLEL--VFPFIEALDP--DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDY---------- 87 (276)
T ss_pred CCcEEEEeCCC---cchHH--HHHHHHHhcc--CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHH----------
Confidence 36799999743 22232 6667776654 5999999999877654321 233333322222222
Q ss_pred ccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCc--c--ccCCCcccCCH----HH
Q 020406 151 TEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKS--E--AEGPREAFLNL----EL 222 (326)
Q Consensus 151 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~--~--~~~~~~~~~~~----~~ 222 (326)
++.++++|+||||||.+|+.+|.+ .|++++++|++++.......... . .......+... ..
T Consensus 88 ---l~~~~~~LvG~S~GG~va~~~a~~--------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (276)
T TIGR02240 88 ---LDYGQVNAIGVSWGGALAQQFAHD--------YPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHI 156 (276)
T ss_pred ---hCcCceEEEEECHHHHHHHHHHHH--------CHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccch
Confidence 233689999999999999999999 88999999999986532110000 0 00000000000 00
Q ss_pred HHHHHH-----------hcCCCC-CCCCCCc----cCCCCCC-CCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHH
Q 020406 223 IDRFWR-----------LSIPIG-ETTDHPL----INPFGPV-SPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKN 283 (326)
Q Consensus 223 ~~~~~~-----------~~~~~~-~~~~~~~----~~~~~~~-~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~ 283 (326)
....+. ...... ....... ....... ...+... ..|+|+++|++| ++.+.++++.+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~v~~~~~~~l~~~~~- 234 (276)
T TIGR02240 157 APDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKI-QQPTLVLAGDDDPIIPLINMRLLAWRIP- 234 (276)
T ss_pred hhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcC-CCCEEEEEeCCCCcCCHHHHHHHHHhCC-
Confidence 000000 000000 0000000 0000000 0111112 349999999999 44445555665543
Q ss_pred CCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 284 FGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 284 ~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
..+++++++ +|.... ++++++.+.+.+|+++..
T Consensus 235 ---~~~~~~i~~-gH~~~~-----e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 235 ---NAELHIIDD-GHLFLI-----TRAEAVAPIIMKFLAEER 267 (276)
T ss_pred ---CCEEEEEcC-CCchhh-----ccHHHHHHHHHHHHHHhh
Confidence 458888886 995432 567899999999998753
No 41
>PLN02965 Probable pheophorbidase
Probab=99.74 E-value=1.2e-16 Score=136.02 Aligned_cols=209 Identities=14% Similarity=0.148 Sum_probs=116.8
Q ss_pred EEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc----hHHHHHHHHHHHHHHHhhcCCCCcccc
Q 020406 76 IFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP----AAIEDGYMAVKWLQAQAVANEPDTWLT 151 (326)
Q Consensus 76 ~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~~~ 151 (326)
+|||+||.+ .+... |...+..|... +|.|+++|+|+.+.+..+ ..+++..+.+.-+.+.
T Consensus 5 ~vvllHG~~---~~~~~--w~~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~----------- 67 (255)
T PLN02965 5 HFVFVHGAS---HGAWC--WYKLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSD----------- 67 (255)
T ss_pred EEEEECCCC---CCcCc--HHHHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHh-----------
Confidence 599999863 23332 77777777655 899999999987765422 1244433323322222
Q ss_pred cccCC-CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcc---c--C----Ccc--c------cCC
Q 020406 152 EVADF-GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTV---R--K----KSE--A------EGP 213 (326)
Q Consensus 152 ~~~d~-~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~---~--~----~~~--~------~~~ 213 (326)
++. .+++++||||||.+++.++.+ +|++++++|++++...... . . ... . ...
T Consensus 68 --l~~~~~~~lvGhSmGG~ia~~~a~~--------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
T PLN02965 68 --LPPDHKVILVGHSIGGGSVTEALCK--------FTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGP 137 (255)
T ss_pred --cCCCCCEEEEecCcchHHHHHHHHh--------CchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCC
Confidence 222 489999999999999999998 8899999999987521100 0 0 000 0 000
Q ss_pred Ccc----cCCHHHHHHHH-H-----------hcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHH
Q 020406 214 REA----FLNLELIDRFW-R-----------LSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAE 275 (326)
Q Consensus 214 ~~~----~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~ 275 (326)
... ........... . ......... ..... ......+. ....|+++++|++| ++...++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~-~i~vP~lvi~g~~D~~~~~~~~~ 213 (255)
T PLN02965 138 DKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVR--AFQDL-DKLPPNPE-AEKVPRVYIKTAKDNLFDPVRQD 213 (255)
T ss_pred CCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCc--chhhh-hhccchhh-cCCCCEEEEEcCCCCCCCHHHHH
Confidence 000 00010110000 0 000000000 00000 00000111 12459999999999 3444455
Q ss_pred HHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 276 DYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 276 ~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
.+++.+ .++++++++++||.... ++++++.+.+.+|+++.
T Consensus 214 ~~~~~~----~~a~~~~i~~~GH~~~~-----e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 214 VMVENW----PPAQTYVLEDSDHSAFF-----SVPTTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHhC----CcceEEEecCCCCchhh-----cCHHHHHHHHHHHHHHh
Confidence 555444 44589999999995543 56788888888888754
No 42
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.74 E-value=1.7e-16 Score=134.72 Aligned_cols=214 Identities=17% Similarity=0.190 Sum_probs=116.0
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc----hHHHHHHHHHHHHHHHhhcCCCC
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP----AAIEDGYMAVKWLQAQAVANEPD 147 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~ 147 (326)
.+.|+||++||.+ ++... |...+..+. + +|.|+++|+|+.+.+..+ ..++|....+..+.+.
T Consensus 11 ~~~~~iv~lhG~~---~~~~~--~~~~~~~l~-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~------- 76 (257)
T TIGR03611 11 ADAPVVVLSSGLG---GSGSY--WAPQLDVLT-Q-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA------- 76 (257)
T ss_pred CCCCEEEEEcCCC---cchhH--HHHHHHHHH-h-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-------
Confidence 4568999999763 33332 555555443 4 799999999977654321 1233332222222222
Q ss_pred cccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccc--------cCCCcccCC
Q 020406 148 TWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEA--------EGPREAFLN 219 (326)
Q Consensus 148 ~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~--------~~~~~~~~~ 219 (326)
++..+++++|||+||.+|+.++.+ .++.++++|+++++........... ......+..
T Consensus 77 ------~~~~~~~l~G~S~Gg~~a~~~a~~--------~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T TIGR03611 77 ------LNIERFHFVGHALGGLIGLQLALR--------YPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVH 142 (257)
T ss_pred ------hCCCcEEEEEechhHHHHHHHHHH--------ChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhh
Confidence 334689999999999999999988 7788999999987654321100000 000000000
Q ss_pred H---HHHHHHHH-hcCCCCCCCCCCccCC-------------CC--CCCCCcccCCCCcEEEEEcCcC--cchhhHHHHH
Q 020406 220 L---ELIDRFWR-LSIPIGETTDHPLINP-------------FG--PVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYA 278 (326)
Q Consensus 220 ~---~~~~~~~~-~~~~~~~~~~~~~~~~-------------~~--~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~ 278 (326)
. ......|. ................ +. .....+. ....|+++++|++| ++.+.+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~P~l~i~g~~D~~~~~~~~~~~~ 221 (257)
T TIGR03611 143 AQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLD-RIQHPVLLIANRDDMLVPYTQSLRLA 221 (257)
T ss_pred hhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhc-ccCccEEEEecCcCcccCHHHHHHHH
Confidence 0 00000000 0000000000000000 00 0000111 11459999999999 4455666565
Q ss_pred HHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 279 KTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 279 ~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
+.+ .+.+++.+++++|.+.. ++++++.+.+.+||++
T Consensus 222 ~~~----~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 222 AAL----PNAQLKLLPYGGHASNV-----TDPETFNRALLDFLKT 257 (257)
T ss_pred Hhc----CCceEEEECCCCCCccc-----cCHHHHHHHHHHHhcC
Confidence 554 34588999999996543 4678899999999863
No 43
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.73 E-value=4.9e-17 Score=151.53 Aligned_cols=172 Identities=26% Similarity=0.321 Sum_probs=127.3
Q ss_pred eeecccccEEEeeCCcEEecCCCCCCCCC-------CCCCCceeeee------------------------EecCCCCeE
Q 020406 12 LVDECRGVLFVYSDGSIVRLPKPSFSVPV-------HDDGSVVWKDV------------------------VFDPVHDLS 60 (326)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~~~~v------------------------~~~~~~~~~ 60 (326)
+|.+-.|.++......+..|.+.|++.|+ ++......+.+ ...+.|++.
T Consensus 1 ~v~t~~G~v~G~~~~~~~~F~GIPYA~pP~g~~Rf~~p~~~~~w~~~~~a~~~g~~c~Q~~~~~~~~~~~~~~~sEdcl~ 80 (493)
T cd00312 1 LVVTPNGKVRGVDEGGVYSFLGIPYAEPPVGDLRFKEPQPYEPWSDVLDATSYPPSCMQWDQLGGGLWNAKLPGSEDCLY 80 (493)
T ss_pred CEEeCCceEEeEEeCCEEEEeccccCCCCCccccCCCCCCCCCCcCceeccccCCCCccCCccccccccCCCCCCCcCCe
Confidence 35566788888777789999999999887 22111111111 113567899
Q ss_pred EEEEccCCC-CCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCC-cEEEeecCCCCCCC---------CCchHHHH
Q 020406 61 LRLYKPALP-VSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQ-AVIISPDYRLAPEN---------RLPAAIED 129 (326)
Q Consensus 61 ~~~~~P~~~-~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g-~~vi~~d~r~~~~~---------~~~~~~~d 129 (326)
+++|.|... ..++.|+|||+|||||..|+... + ....++.+.+ ++|+.++||+.+.. .....+.|
T Consensus 81 l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~--~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D 156 (493)
T cd00312 81 LNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSL--Y--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKD 156 (493)
T ss_pred EEEEeCCCCCCCCCCCEEEEEcCCccccCCCCC--C--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHH
Confidence 999999764 24678999999999999888764 2 2345665544 99999999965432 23457899
Q ss_pred HHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 130 GYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
+..+++|++++...++ .|+++|.|+|+|+||+++..++.. . .....++++|+.|+...
T Consensus 157 ~~~al~wv~~~i~~fg--------gd~~~v~~~G~SaG~~~~~~~~~~---~---~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 157 QRLALKWVQDNIAAFG--------GDPDSVTIFGESAGGASVSLLLLS---P---DSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHhC--------CCcceEEEEeecHHHHHhhhHhhC---c---chhHHHHHHhhhcCCcc
Confidence 9999999999988865 889999999999999999988865 0 02357899999987554
No 44
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.73 E-value=3.3e-16 Score=135.08 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=71.8
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc------hHHHHHHHHHHHHHHHhhcCC
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP------AAIEDGYMAVKWLQAQAVANE 145 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~------~~~~d~~~~~~~l~~~~~~~~ 145 (326)
+..|.||++||++ ++... +......++.+.||.|+.+|+|+.+.+..+ ..+++..+.+..+.+.
T Consensus 23 ~~~~~vl~~hG~~---g~~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (288)
T TIGR01250 23 GEKIKLLLLHGGP---GMSHE--YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK----- 92 (288)
T ss_pred CCCCeEEEEcCCC---CccHH--HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH-----
Confidence 3457899999863 22221 445555666656999999999987654432 1234444444444433
Q ss_pred CCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 146 PDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 146 ~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
++.++++++|||+||.+++.++.. .+.+++++++.++..
T Consensus 93 --------~~~~~~~liG~S~Gg~ia~~~a~~--------~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 93 --------LGLDKFYLLGHSWGGMLAQEYALK--------YGQHLKGLIISSMLD 131 (288)
T ss_pred --------cCCCcEEEEEeehHHHHHHHHHHh--------CccccceeeEecccc
Confidence 334679999999999999999998 788999999988754
No 45
>PRK10985 putative hydrolase; Provisional
Probab=99.72 E-value=3.2e-16 Score=138.07 Aligned_cols=133 Identities=13% Similarity=0.118 Sum_probs=87.2
Q ss_pred CceeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC-
Q 020406 45 SVVWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL- 123 (326)
Q Consensus 45 ~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~- 123 (326)
....+.++.++++.+.+++.... ....+.|+||++||.+. +.... ....++..+.. .||.|+.+|+|+.+..+.
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~-~~~~~~p~vll~HG~~g--~~~~~-~~~~~~~~l~~-~G~~v~~~d~rG~g~~~~~ 104 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDP-AQARHKPRLVLFHGLEG--SFNSP-YAHGLLEAAQK-RGWLGVVMHFRGCSGEPNR 104 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCC-ccCCCCCEEEEeCCCCC--CCcCH-HHHHHHHHHHH-CCCEEEEEeCCCCCCCccC
Confidence 33456677776655666543221 12346799999997532 21111 12235555655 499999999998654321
Q ss_pred ------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCC-cceeEEEEe
Q 020406 124 ------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAP-VRVKGYILL 196 (326)
Q Consensus 124 ------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~-~~i~~~il~ 196 (326)
....+|+..++++++++. +..+++++||||||.+++.++.+. .+ ..+.++|++
T Consensus 105 ~~~~~~~~~~~D~~~~i~~l~~~~-------------~~~~~~~vG~S~GG~i~~~~~~~~-------~~~~~~~~~v~i 164 (324)
T PRK10985 105 LHRIYHSGETEDARFFLRWLQREF-------------GHVPTAAVGYSLGGNMLACLLAKE-------GDDLPLDAAVIV 164 (324)
T ss_pred CcceECCCchHHHHHHHHHHHHhC-------------CCCCEEEEEecchHHHHHHHHHhh-------CCCCCccEEEEE
Confidence 235789999999998763 226899999999999988888761 11 248888888
Q ss_pred ccccCC
Q 020406 197 APFFGG 202 (326)
Q Consensus 197 ~p~~~~ 202 (326)
++.++.
T Consensus 165 ~~p~~~ 170 (324)
T PRK10985 165 SAPLML 170 (324)
T ss_pred cCCCCH
Confidence 876654
No 46
>COG0400 Predicted esterase [General function prediction only]
Probab=99.72 E-value=5.8e-16 Score=125.16 Aligned_cols=176 Identities=23% Similarity=0.256 Sum_probs=121.5
Q ss_pred CCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC-----------CCCCCc--hHHHHHHHHHHHH
Q 020406 71 STKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLA-----------PENRLP--AAIEDGYMAVKWL 137 (326)
Q Consensus 71 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~-----------~~~~~~--~~~~d~~~~~~~l 137 (326)
+...|+||++||-| ++... +.++...++.. +.++++.-+.. ....+. ....+.....+++
T Consensus 15 ~p~~~~iilLHG~G---gde~~--~~~~~~~~~P~--~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 15 DPAAPLLILLHGLG---GDELD--LVPLPELILPN--ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCcEEEEEecCC---CChhh--hhhhhhhcCCC--CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 35678999999865 33322 34444444443 55665543311 111121 2233344455566
Q ss_pred HHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCccc
Q 020406 138 QAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAF 217 (326)
Q Consensus 138 ~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~ 217 (326)
.....+. ++|.+|++++|+|.|+++++.+..+ .+..++++|+++|..-....
T Consensus 88 ~~~~~~~--------gi~~~~ii~~GfSqGA~ial~~~l~--------~~~~~~~ail~~g~~~~~~~------------ 139 (207)
T COG0400 88 EELAEEY--------GIDSSRIILIGFSQGANIALSLGLT--------LPGLFAGAILFSGMLPLEPE------------ 139 (207)
T ss_pred HHHHHHh--------CCChhheEEEecChHHHHHHHHHHh--------CchhhccchhcCCcCCCCCc------------
Confidence 6555443 5889999999999999999999999 78899999999997632221
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCC
Q 020406 218 LNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEG 295 (326)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~ 295 (326)
..+ . ....|+|++||+.| ++...+.++.+.+++.|.+++.+.++
T Consensus 140 ------------------------~~~--~-------~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~- 185 (207)
T COG0400 140 ------------------------LLP--D-------LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE- 185 (207)
T ss_pred ------------------------ccc--c-------cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-
Confidence 000 0 01349999999999 46778899999999999999999999
Q ss_pred CceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 296 KQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 296 ~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
++|... .+.++++.+|+...
T Consensus 186 ~GH~i~---------~e~~~~~~~wl~~~ 205 (207)
T COG0400 186 GGHEIP---------PEELEAARSWLANT 205 (207)
T ss_pred CCCcCC---------HHHHHHHHHHHHhc
Confidence 799654 56778888888764
No 47
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.72 E-value=3.7e-16 Score=131.53 Aligned_cols=100 Identities=27% Similarity=0.295 Sum_probs=71.3
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc-----hHHHHHHHH-HHHHHHHhhcCCCC
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP-----AAIEDGYMA-VKWLQAQAVANEPD 147 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~-----~~~~d~~~~-~~~l~~~~~~~~~~ 147 (326)
.|+||++||.+ ++... |...+..|+ + |+.|+.+|+|+.+.+..+ ..++++... +..+.+.
T Consensus 1 ~~~vv~~hG~~---~~~~~--~~~~~~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------- 66 (251)
T TIGR03695 1 KPVLVFLHGFL---GSGAD--WQALIELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQ------- 66 (251)
T ss_pred CCEEEEEcCCC---Cchhh--HHHHHHHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHH-------
Confidence 37899999753 33332 677777776 4 899999999977655432 223333332 3333332
Q ss_pred cccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 148 TWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 148 ~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
.+.++++++|||+||.+|+.++.+ .+..+++++++++...
T Consensus 67 ------~~~~~~~l~G~S~Gg~ia~~~a~~--------~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 67 ------LGIEPFFLVGYSMGGRIALYYALQ--------YPERVQGLILESGSPG 106 (251)
T ss_pred ------cCCCeEEEEEeccHHHHHHHHHHh--------CchheeeeEEecCCCC
Confidence 344789999999999999999998 7788999999987543
No 48
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.72 E-value=1.7e-16 Score=133.90 Aligned_cols=242 Identities=20% Similarity=0.157 Sum_probs=135.9
Q ss_pred eeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHH
Q 020406 48 WKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAI 127 (326)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~ 127 (326)
.+.+.++.+.++...-..++. ..+..+|++||-| .|..- |......|+. ...|.++|..+.+.++.|..-
T Consensus 67 ~~~v~i~~~~~iw~~~~~~~~---~~~~plVliHGyG--Ag~g~---f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~ 136 (365)
T KOG4409|consen 67 KKYVRIPNGIEIWTITVSNES---ANKTPLVLIHGYG--AGLGL---FFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFS 136 (365)
T ss_pred eeeeecCCCceeEEEeecccc---cCCCcEEEEeccc--hhHHH---HHHhhhhhhh--cCceEEecccCCCCCCCCCCC
Confidence 445555544344433333332 5667799999754 33322 6667788877 589999999887766655433
Q ss_pred HHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCccc-C
Q 020406 128 EDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVR-K 206 (326)
Q Consensus 128 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~-~ 206 (326)
.|-..+.+|..+..+. |+...+.++++|+|||+||++|..+|.+ +|++|+.+||++|+-..... .
T Consensus 137 ~d~~~~e~~fvesiE~------WR~~~~L~KmilvGHSfGGYLaa~YAlK--------yPerV~kLiLvsP~Gf~~~~~~ 202 (365)
T KOG4409|consen 137 IDPTTAEKEFVESIEQ------WRKKMGLEKMILVGHSFGGYLAAKYALK--------YPERVEKLILVSPWGFPEKPDS 202 (365)
T ss_pred CCcccchHHHHHHHHH------HHHHcCCcceeEeeccchHHHHHHHHHh--------ChHhhceEEEecccccccCCCc
Confidence 2222222222222221 1112455899999999999999999999 99999999999997543322 1
Q ss_pred CccccCCCc----------ccCCH------------HHHHHH----HHhcCCCCCCC-----------------------
Q 020406 207 KSEAEGPRE----------AFLNL------------ELIDRF----WRLSIPIGETT----------------------- 237 (326)
Q Consensus 207 ~~~~~~~~~----------~~~~~------------~~~~~~----~~~~~~~~~~~----------------------- 237 (326)
......+.. ..+++ .....+ +..+ +.....
T Consensus 203 ~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~-~~~~~ed~l~~YiY~~n~~~psgE~~fk~ 281 (365)
T KOG4409|consen 203 EPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKF-PSLIEEDFLHEYIYHCNAQNPSGETAFKN 281 (365)
T ss_pred chhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhc-cccchhHHHHHHHHHhcCCCCcHHHHHHH
Confidence 111100000 00010 001000 0000 000000
Q ss_pred ----CCCccCCCCCCCCCcccCCCCcEEEEEcCcC-cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHH
Q 020406 238 ----DHPLINPFGPVSPSLEAVDLDPILVVVGGSD-LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANR 312 (326)
Q Consensus 238 ----~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D-~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~ 312 (326)
..+...|+.... ......+|+++|+|++| +=...+.++.+.+. ...++.+++|++||.... ++++.
T Consensus 282 l~~~~g~Ar~Pm~~r~--~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~--~~~~~~~~v~~aGHhvyl-----Dnp~~ 352 (365)
T KOG4409|consen 282 LFEPGGWARRPMIQRL--RELKKDVPVTFIYGDRDWMDKNAGLEVTKSLM--KEYVEIIIVPGAGHHVYL-----DNPEF 352 (365)
T ss_pred HHhccchhhhhHHHHH--HhhccCCCEEEEecCcccccchhHHHHHHHhh--cccceEEEecCCCceeec-----CCHHH
Confidence 000111111000 01112459999999999 55556666666652 346899999999995544 35678
Q ss_pred HHHHHHHHhhh
Q 020406 313 LMQIIKHFIAE 323 (326)
Q Consensus 313 ~~~~~~~fl~~ 323 (326)
+.+.+.+++++
T Consensus 353 Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 353 FNQIVLEECDK 363 (365)
T ss_pred HHHHHHHHHhc
Confidence 88888888764
No 49
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.72 E-value=5.9e-16 Score=133.26 Aligned_cols=101 Identities=22% Similarity=0.215 Sum_probs=71.2
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC----chHHHHHHHHHHHHHHHhhcCCCCc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL----PAAIEDGYMAVKWLQAQAVANEPDT 148 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~----~~~~~d~~~~~~~l~~~~~~~~~~~ 148 (326)
+.|+||++||.+ ++... |...+..|+. +|.|+.+|+|+.+.+.. ...+++..+.+..+.+.
T Consensus 27 ~~~~vv~~hG~~---~~~~~--~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~-------- 91 (278)
T TIGR03056 27 AGPLLLLLHGTG---ASTHS--WRDLMPPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA-------- 91 (278)
T ss_pred CCCeEEEEcCCC---CCHHH--HHHHHHHHhh--CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH--------
Confidence 458999999853 33332 6666666654 59999999997765432 22344544444444433
Q ss_pred ccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 149 WLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 149 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
.+.++++|+|||+||.+++.++.+ .+.++++++++++...
T Consensus 92 -----~~~~~~~lvG~S~Gg~~a~~~a~~--------~p~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 92 -----EGLSPDGVIGHSAGAAIALRLALD--------GPVTPRMVVGINAALM 131 (278)
T ss_pred -----cCCCCceEEEECccHHHHHHHHHh--------CCcccceEEEEcCccc
Confidence 223688999999999999999988 7788999999987553
No 50
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.71 E-value=1.4e-15 Score=137.32 Aligned_cols=104 Identities=23% Similarity=0.275 Sum_probs=69.5
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCch----HHHHHHH-HHHHHHHHhhcCCC
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPA----AIEDGYM-AVKWLQAQAVANEP 146 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~----~~~d~~~-~~~~l~~~~~~~~~ 146 (326)
++.|+||++||.|. +... |...+..|+. +|.|+++|+|+.+.+..+. ...+..+ .++.+.+....
T Consensus 103 ~~~p~vvllHG~~~---~~~~--~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 172 (402)
T PLN02894 103 EDAPTLVMVHGYGA---SQGF--FFRNFDALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA--- 172 (402)
T ss_pred CCCCEEEEECCCCc---chhH--HHHHHHHHHh--CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH---
Confidence 45699999998643 2222 5566677754 5999999999876554322 1112111 11111111111
Q ss_pred CcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 147 DTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 147 ~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
.+.++++|+||||||++|+.+|.+ ++.+++++|+++|..
T Consensus 173 -------l~~~~~~lvGhS~GG~la~~~a~~--------~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 173 -------KNLSNFILLGHSFGGYVAAKYALK--------HPEHVQHLILVGPAG 211 (402)
T ss_pred -------cCCCCeEEEEECHHHHHHHHHHHh--------CchhhcEEEEECCcc
Confidence 344789999999999999999999 889999999998754
No 51
>PLN02511 hydrolase
Probab=99.71 E-value=9.1e-16 Score=138.04 Aligned_cols=132 Identities=14% Similarity=0.082 Sum_probs=90.7
Q ss_pred CceeeeeEecCCCCeEEEEEccCCC-CCCCCcEEEEEcCCccccCCCCCCcc-hhHHHHHhhcCCcEEEeecCCCCCCCC
Q 020406 45 SVVWKDVVFDPVHDLSLRLYKPALP-VSTKLPIFYYIHGGGFCIGSRTWPNC-QNYCFKLASELQAVIISPDYRLAPENR 122 (326)
Q Consensus 45 ~~~~~~v~~~~~~~~~~~~~~P~~~-~~~~~p~vv~~HGgg~~~~~~~~~~~-~~~~~~la~~~g~~vi~~d~r~~~~~~ 122 (326)
...++.+..++++.+.++++.+... .....|+||++||.+ .++... | ..++..+..+ ||.|+++|+|+++.+.
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~--g~s~~~--y~~~~~~~~~~~-g~~vv~~d~rG~G~s~ 144 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLT--GGSDDS--YVRHMLLRARSK-GWRVVVFNSRGCADSP 144 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCC--CCCCCH--HHHHHHHHHHHC-CCEEEEEecCCCCCCC
Confidence 3445556666666677777754321 124569999999752 222221 3 2344445444 9999999999876543
Q ss_pred C-------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcc--eeEE
Q 020406 123 L-------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVR--VKGY 193 (326)
Q Consensus 123 ~-------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~--i~~~ 193 (326)
. ....+|+..+++++..... ..+++++||||||.+++.++.+ .+++ +.++
T Consensus 145 ~~~~~~~~~~~~~Dl~~~i~~l~~~~~-------------~~~~~lvG~SlGg~i~~~yl~~--------~~~~~~v~~~ 203 (388)
T PLN02511 145 VTTPQFYSASFTGDLRQVVDHVAGRYP-------------SANLYAAGWSLGANILVNYLGE--------EGENCPLSGA 203 (388)
T ss_pred CCCcCEEcCCchHHHHHHHHHHHHHCC-------------CCCEEEEEechhHHHHHHHHHh--------cCCCCCceEE
Confidence 2 2457899999999987642 2689999999999999999988 4444 8888
Q ss_pred EEeccccCC
Q 020406 194 ILLAPFFGG 202 (326)
Q Consensus 194 il~~p~~~~ 202 (326)
+++++.++.
T Consensus 204 v~is~p~~l 212 (388)
T PLN02511 204 VSLCNPFDL 212 (388)
T ss_pred EEECCCcCH
Confidence 888765543
No 52
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.71 E-value=5.9e-16 Score=134.75 Aligned_cols=100 Identities=19% Similarity=0.247 Sum_probs=71.0
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCch---HHHHHHHHHHHHHHHhhcCCCCcc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPA---AIEDGYMAVKWLQAQAVANEPDTW 149 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~ 149 (326)
..|.||++||.+ ++... |...+..|+.+ +.|+++|.|+.+.+..+. .+++..+.+..+.+.
T Consensus 26 ~g~~vvllHG~~---~~~~~--w~~~~~~L~~~--~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~--------- 89 (295)
T PRK03592 26 EGDPIVFLHGNP---TSSYL--WRNIIPHLAGL--GRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA--------- 89 (295)
T ss_pred CCCEEEEECCCC---CCHHH--HHHHHHHHhhC--CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------
Confidence 347899999753 33332 66777777665 499999999877654432 233333323222222
Q ss_pred cccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 150 LTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 150 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
++.++++++|||+||.+|+.++.+ +|++++++|++++..
T Consensus 90 ----l~~~~~~lvGhS~Gg~ia~~~a~~--------~p~~v~~lil~~~~~ 128 (295)
T PRK03592 90 ----LGLDDVVLVGHDWGSALGFDWAAR--------HPDRVRGIAFMEAIV 128 (295)
T ss_pred ----hCCCCeEEEEECHHHHHHHHHHHh--------ChhheeEEEEECCCC
Confidence 233789999999999999999999 889999999999743
No 53
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.71 E-value=2.3e-16 Score=140.84 Aligned_cols=218 Identities=17% Similarity=0.131 Sum_probs=119.8
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc----hHHHHHHHH-HHHHHHHhhcCCCCc
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP----AAIEDGYMA-VKWLQAQAVANEPDT 148 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~----~~~~d~~~~-~~~l~~~~~~~~~~~ 148 (326)
.|.||++||.+ ++... |...+..|+ + +|.|+++|+++.+.+..+ ..+++..+. .+++..
T Consensus 88 gp~lvllHG~~---~~~~~--w~~~~~~L~-~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~--------- 151 (360)
T PLN02679 88 GPPVLLVHGFG---ASIPH--WRRNIGVLA-K-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEE--------- 151 (360)
T ss_pred CCeEEEECCCC---CCHHH--HHHHHHHHh-c-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHH---------
Confidence 47899999753 22222 667777665 3 699999999987765432 123333332 233332
Q ss_pred ccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccC--Cc-ccc--CCC---------
Q 020406 149 WLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRK--KS-EAE--GPR--------- 214 (326)
Q Consensus 149 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~--~~-~~~--~~~--------- 214 (326)
+..++++|+|||+||.+++.++... +|++++++|++++........ .. ... ...
T Consensus 152 -----l~~~~~~lvGhS~Gg~ia~~~a~~~-------~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (360)
T PLN02679 152 -----VVQKPTVLIGNSVGSLACVIAASES-------TRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLK 219 (360)
T ss_pred -----hcCCCeEEEEECHHHHHHHHHHHhc-------ChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhh
Confidence 2237999999999999999888641 578999999999753221100 00 000 000
Q ss_pred ccc---------CCHHHHHHHHHhcCCCCCCC------------CCC-----ccCCCC----CC-CCCcccCCCCcEEEE
Q 020406 215 EAF---------LNLELIDRFWRLSIPIGETT------------DHP-----LINPFG----PV-SPSLEAVDLDPILVV 263 (326)
Q Consensus 215 ~~~---------~~~~~~~~~~~~~~~~~~~~------------~~~-----~~~~~~----~~-~~~~~~~~~~P~lii 263 (326)
.+. .....++.++.......... ... ...... .. ...+.. ...|+||+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PtLii 298 (360)
T PLN02679 220 QRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPR-ISLPILVL 298 (360)
T ss_pred chhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhh-cCCCEEEE
Confidence 000 00011111111111000000 000 000000 00 001111 14499999
Q ss_pred EcCcCcc--hhhH-HHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 264 VGGSDLL--KDRA-EDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 264 ~G~~D~~--~~~~-~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
+|++|.+ .+.. .++.+.+.+.-.+++++++++++|... .++++++.+.+.+||++.+
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~-----~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPH-----DDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCcc-----ccCHHHHHHHHHHHHHhcC
Confidence 9999943 3221 234555655556789999999999433 3678999999999998754
No 54
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.70 E-value=4.1e-15 Score=132.50 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=89.1
Q ss_pred ceeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCC---ccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC
Q 020406 46 VVWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGG---GFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR 122 (326)
Q Consensus 46 ~~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGg---g~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~ 122 (326)
.+...|.+..+ .+.+..|.|.... ...+.||++||- +|+.... .+..++..|+.+ ||.|+.+|++..+...
T Consensus 36 ~~~~~~v~~~~-~~~l~~~~~~~~~-~~~~pvl~v~~~~~~~~~~d~~---~~~~~~~~L~~~-G~~V~~~D~~g~g~s~ 109 (350)
T TIGR01836 36 VTPKEVVYRED-KVVLYRYTPVKDN-THKTPLLIVYALVNRPYMLDLQ---EDRSLVRGLLER-GQDVYLIDWGYPDRAD 109 (350)
T ss_pred CCCCceEEEcC-cEEEEEecCCCCc-CCCCcEEEeccccccceeccCC---CCchHHHHHHHC-CCeEEEEeCCCCCHHH
Confidence 44455555543 6777778776432 223348999962 2222111 145677777766 9999999998754322
Q ss_pred ----CchHH-HHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec
Q 020406 123 ----LPAAI-EDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA 197 (326)
Q Consensus 123 ----~~~~~-~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~ 197 (326)
+.... +|+.++++++.+.. +.++++++|||+||.+++.++.. .+++++++|+++
T Consensus 110 ~~~~~~d~~~~~~~~~v~~l~~~~-------------~~~~i~lvGhS~GG~i~~~~~~~--------~~~~v~~lv~~~ 168 (350)
T TIGR01836 110 RYLTLDDYINGYIDKCVDYICRTS-------------KLDQISLLGICQGGTFSLCYAAL--------YPDKIKNLVTMV 168 (350)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHh-------------CCCcccEEEECHHHHHHHHHHHh--------CchheeeEEEec
Confidence 22222 34677888888764 23789999999999999999887 677899999999
Q ss_pred cccCCc
Q 020406 198 PFFGGT 203 (326)
Q Consensus 198 p~~~~~ 203 (326)
|.++..
T Consensus 169 ~p~~~~ 174 (350)
T TIGR01836 169 TPVDFE 174 (350)
T ss_pred cccccC
Confidence 877653
No 55
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.70 E-value=8.7e-17 Score=151.54 Aligned_cols=176 Identities=24% Similarity=0.335 Sum_probs=117.8
Q ss_pred CcceeecccccEEE----eeC-CcEEecCCCCCCCCCC-------CCCCceeeee--------------E----------
Q 020406 9 TASLVDECRGVLFV----YSD-GSIVRLPKPSFSVPVH-------DDGSVVWKDV--------------V---------- 52 (326)
Q Consensus 9 ~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~p~~-------~~~~~~~~~v--------------~---------- 52 (326)
...+|.+-.|.++. ..+ ..+..|.+.|++.|+. +........+ .
T Consensus 22 ~~~~v~~~~g~i~G~~~~~~~~~~v~~f~gIpYA~pP~g~~Rf~~p~~~~~~~~~~~a~~~~~~C~Q~~~~~~~~~~~~~ 101 (535)
T PF00135_consen 22 SSPVVTTSYGKIRGIRVNTDDGKGVYSFLGIPYAQPPVGELRFRPPQPPPPWSGVRDATKYGPACPQPPPPGPSPGFNPP 101 (535)
T ss_dssp TCCEEEETTEEEEEEEEEESTCCEEEEEEEEESSE---GGGTTS--EB--S-SSEEETBS---BESCECTTSSHHHCSHS
T ss_pred CCCEEEECCeEEEeEEEecCCCcceEEEeCcccCCCCCCCcccccccccccchhhhhhhhcccccccccccccccccccc
Confidence 34488888898887 334 4799999999998761 1111111111 0
Q ss_pred e-cCCCCeEEEEEccCCCCCC-CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC-------CCC--
Q 020406 53 F-DPVHDLSLRLYKPALPVST-KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLA-------PEN-- 121 (326)
Q Consensus 53 ~-~~~~~~~~~~~~P~~~~~~-~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~-------~~~-- 121 (326)
. .+.|++.++||.|...... +.||+||||||||..|+... .......++.+.+++|+.++||++ ++.
T Consensus 102 ~~~sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~--~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~ 179 (535)
T PF00135_consen 102 VGQSEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSF--PPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDA 179 (535)
T ss_dssp SHBES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTS--GGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTS
T ss_pred cCCCchHHHHhhhhccccccccccceEEEeecccccCCCccc--ccccccccccCCCEEEEEeccccccccccccccccc
Confidence 1 2557899999999886333 78999999999999998732 122233444455999999999943 222
Q ss_pred C-CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 122 R-LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 122 ~-~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
. ....+.|...+++|++++...+| .|+++|.|+|+|+||..+..++.. ......+.++|+.|+..
T Consensus 180 ~~gN~Gl~Dq~~AL~WV~~nI~~FG--------GDp~~VTl~G~SAGa~sv~~~l~s------p~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 180 PSGNYGLLDQRLALKWVQDNIAAFG--------GDPDNVTLFGQSAGAASVSLLLLS------PSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HBSTHHHHHHHHHHHHHHHHGGGGT--------EEEEEEEEEEETHHHHHHHHHHHG------GGGTTSBSEEEEES--T
T ss_pred CchhhhhhhhHHHHHHHHhhhhhcc--------cCCcceeeeeecccccccceeeec------ccccccccccccccccc
Confidence 2 56689999999999999999977 888999999999999999988865 11246899999999843
No 56
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.70 E-value=5.3e-16 Score=134.30 Aligned_cols=100 Identities=20% Similarity=0.268 Sum_probs=73.6
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc----hHHHHHHHHHHHHHHHhhcCCCCc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP----AAIEDGYMAVKWLQAQAVANEPDT 148 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~ 148 (326)
..|.|||+||.+ .... .|...+..|. + +|.|+++|+++.+.+..+ ..+++..+.+..+.+..
T Consensus 33 ~~~~iv~lHG~~---~~~~--~~~~~~~~l~-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~------- 98 (286)
T PRK03204 33 TGPPILLCHGNP---TWSF--LYRDIIVALR-D-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL------- 98 (286)
T ss_pred CCCEEEEECCCC---ccHH--HHHHHHHHHh-C-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh-------
Confidence 357899999853 2222 2555666654 3 699999999987654432 34567777777666543
Q ss_pred ccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 149 WLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 149 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
+.++++++|||+||.+|+.++.. ++++++++|++++..
T Consensus 99 ------~~~~~~lvG~S~Gg~va~~~a~~--------~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 99 ------GLDRYLSMGQDWGGPISMAVAVE--------RADRVRGVVLGNTWF 136 (286)
T ss_pred ------CCCCEEEEEECccHHHHHHHHHh--------ChhheeEEEEECccc
Confidence 34789999999999999999988 889999999988754
No 57
>PRK06489 hypothetical protein; Provisional
Probab=99.70 E-value=5.5e-16 Score=138.59 Aligned_cols=135 Identities=21% Similarity=0.215 Sum_probs=85.4
Q ss_pred CCCCCCCCCceeeeeEecCCCCe-EEEEEccCCCCCCC-------CcEEEEEcCCccccCCCCCCcch--hHHHHHh---
Q 020406 37 SVPVHDDGSVVWKDVVFDPVHDL-SLRLYKPALPVSTK-------LPIFYYIHGGGFCIGSRTWPNCQ--NYCFKLA--- 103 (326)
Q Consensus 37 ~~p~~~~~~~~~~~v~~~~~~~~-~~~~~~P~~~~~~~-------~p~vv~~HGgg~~~~~~~~~~~~--~~~~~la--- 103 (326)
+.|.++....+-++.++.+|..+ .+++++-... .+. .|.||++||++. +... |. .+...+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~G-~~~~~~~~~~gpplvllHG~~~---~~~~--~~~~~~~~~l~~~~ 98 (360)
T PRK06489 25 AYPAPQEGDWVARDFTFHSGETLPELRLHYTTLG-TPHRNADGEIDNAVLVLHGTGG---SGKS--FLSPTFAGELFGPG 98 (360)
T ss_pred CCCCCccCceeccceeccCCCCcCCceEEEEecC-CCCcccccCCCCeEEEeCCCCC---chhh--hccchhHHHhcCCC
Confidence 34556667777788888775432 1333332221 112 688999998643 2221 22 3333331
Q ss_pred ----hcCCcEEEeecCCCCCCCCCc----------hHHHHHHH-HHHHHHHHhhcCCCCcccccccCCCcEE-EeecChh
Q 020406 104 ----SELQAVIISPDYRLAPENRLP----------AAIEDGYM-AVKWLQAQAVANEPDTWLTEVADFGKVF-ISGDSAG 167 (326)
Q Consensus 104 ----~~~g~~vi~~d~r~~~~~~~~----------~~~~d~~~-~~~~l~~~~~~~~~~~~~~~~~d~~~i~-l~G~S~G 167 (326)
.+ +|.|+++|+|+.+.+..+ ..+++..+ .+..+.+. ++.+++. |+|||||
T Consensus 99 ~~l~~~-~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~-------------lgi~~~~~lvG~SmG 164 (360)
T PRK06489 99 QPLDAS-KYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEG-------------LGVKHLRLILGTSMG 164 (360)
T ss_pred Cccccc-CCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHh-------------cCCCceeEEEEECHH
Confidence 33 799999999987655432 13445443 33444443 3346775 8999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 168 GNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 168 G~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
|.+|+.+|.+ +|++++++|++++.
T Consensus 165 G~vAl~~A~~--------~P~~V~~LVLi~s~ 188 (360)
T PRK06489 165 GMHAWMWGEK--------YPDFMDALMPMASQ 188 (360)
T ss_pred HHHHHHHHHh--------CchhhheeeeeccC
Confidence 9999999999 89999999999864
No 58
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.70 E-value=8e-15 Score=123.49 Aligned_cols=118 Identities=26% Similarity=0.280 Sum_probs=82.2
Q ss_pred ceeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCch
Q 020406 46 VVWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPA 125 (326)
Q Consensus 46 ~~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~ 125 (326)
+.-+.+++. ++.+.+. .. ..+..|+|+++||- . .... .|+.....|+.+ ||.|+++|+|+.+.+..|.
T Consensus 22 ~~hk~~~~~---gI~~h~~--e~-g~~~gP~illlHGf--P-e~wy--swr~q~~~la~~-~~rviA~DlrGyG~Sd~P~ 89 (322)
T KOG4178|consen 22 ISHKFVTYK---GIRLHYV--EG-GPGDGPIVLLLHGF--P-ESWY--SWRHQIPGLASR-GYRVIAPDLRGYGFSDAPP 89 (322)
T ss_pred cceeeEEEc---cEEEEEE--ee-cCCCCCEEEEEccC--C-ccch--hhhhhhhhhhhc-ceEEEecCCCCCCCCCCCC
Confidence 334444444 3555433 33 24678999999954 3 2222 266777888777 8999999999877665543
Q ss_pred H---------HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEe
Q 020406 126 A---------IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILL 196 (326)
Q Consensus 126 ~---------~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~ 196 (326)
. ..|+...++.+. .++++++||++|+.+|-.+|.. +|+++++++++
T Consensus 90 ~~~~Yt~~~l~~di~~lld~Lg-----------------~~k~~lvgHDwGaivaw~la~~--------~Perv~~lv~~ 144 (322)
T KOG4178|consen 90 HISEYTIDELVGDIVALLDHLG-----------------LKKAFLVGHDWGAIVAWRLALF--------YPERVDGLVTL 144 (322)
T ss_pred CcceeeHHHHHHHHHHHHHHhc-----------------cceeEEEeccchhHHHHHHHHh--------ChhhcceEEEe
Confidence 2 334333333332 3799999999999999999999 99999999998
Q ss_pred cccc
Q 020406 197 APFF 200 (326)
Q Consensus 197 ~p~~ 200 (326)
+...
T Consensus 145 nv~~ 148 (322)
T KOG4178|consen 145 NVPF 148 (322)
T ss_pred cCCC
Confidence 8443
No 59
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.69 E-value=1.6e-15 Score=138.09 Aligned_cols=102 Identities=20% Similarity=0.205 Sum_probs=69.3
Q ss_pred CCcEEEEEcCCccccCCCCCCcchh-HHHHHhh--cCCcEEEeecCCCCCCCCCc----hHHHHHHHHH-HHHHHHhhcC
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQN-YCFKLAS--ELQAVIISPDYRLAPENRLP----AAIEDGYMAV-KWLQAQAVAN 144 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~-~~~~la~--~~g~~vi~~d~r~~~~~~~~----~~~~d~~~~~-~~l~~~~~~~ 144 (326)
..|.|||+||.+ ++... |.. .+..++. +.+|.|+++|+|+.+.+..+ ..+++..+.+ ..+.+.
T Consensus 200 ~k~~VVLlHG~~---~s~~~--W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~---- 270 (481)
T PLN03087 200 AKEDVLFIHGFI---SSSAF--WTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLER---- 270 (481)
T ss_pred CCCeEEEECCCC---ccHHH--HHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHH----
Confidence 357899999763 23222 443 2344432 24899999999987654332 2344444444 233332
Q ss_pred CCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 145 EPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 145 ~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
.+.++++++||||||.+|+.+|.+ +|++++++|+++|..
T Consensus 271 ---------lg~~k~~LVGhSmGG~iAl~~A~~--------~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 271 ---------YKVKSFHIVAHSLGCILALALAVK--------HPGAVKSLTLLAPPY 309 (481)
T ss_pred ---------cCCCCEEEEEECHHHHHHHHHHHh--------ChHhccEEEEECCCc
Confidence 334789999999999999999998 889999999998754
No 60
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.69 E-value=2.7e-15 Score=132.35 Aligned_cols=249 Identities=15% Similarity=0.135 Sum_probs=128.4
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCC-----------------cc----hhHHHHHhhcCCcEEEeecCC
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWP-----------------NC----QNYCFKLASELQAVIISPDYR 116 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~-----------------~~----~~~~~~la~~~g~~vi~~d~r 116 (326)
.+....|.|. .++.+|+++||-|...+...+. .| ..++..|+++ ||.|+++|+|
T Consensus 9 ~l~~~~~~~~----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~-G~~V~~~D~r 83 (332)
T TIGR01607 9 LLKTYSWIVK----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN-GYSVYGLDLQ 83 (332)
T ss_pred eEEEeeeecc----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC-CCcEEEeccc
Confidence 4555666664 3568999999865544321000 01 3567777766 9999999999
Q ss_pred CCCCCC-----------CchHHHHHHHHHHHHHHHhhcCCC--Cccccc-----ccCCCcEEEeecChhHHHHHHHHHHH
Q 020406 117 LAPENR-----------LPAAIEDGYMAVKWLQAQAVANEP--DTWLTE-----VADFGKVFISGDSAGGNIAHNLAVRL 178 (326)
Q Consensus 117 ~~~~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~--~~~~~~-----~~d~~~i~l~G~S~GG~~a~~~a~~~ 178 (326)
+.+.+. +...++|+...++.+++....... ..-+++ .-+..+++|+||||||.+++.++...
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 765432 223445666666655442000000 000000 00124799999999999999988651
Q ss_pred HhCCCC--CCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCC----C--CCCC------CCccCC
Q 020406 179 KAGSLE--LAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPI----G--ETTD------HPLINP 244 (326)
Q Consensus 179 ~~~~~~--~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~------~~~~~~ 244 (326)
.... .....++|+|+.+|.+......... .. .........+..+ ....+. . .... ....+|
T Consensus 164 --~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~-~~-~~~~~~~~l~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp 238 (332)
T TIGR01607 164 --GKSNENNDKLNIKGCISLSGMISIKSVGSDD-SF-KFKYFYLPVMNFM-SRVFPTFRISKKIRYEKSPYVNDIIKFDK 238 (332)
T ss_pred --ccccccccccccceEEEeccceEEecccCCC-cc-hhhhhHHHHHHHH-HHHCCcccccCccccccChhhhhHHhcCc
Confidence 1110 0113699999999887432110000 00 0000000001000 000000 0 0000 000111
Q ss_pred CCCC------------------CCCcccCC-CCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeec
Q 020406 245 FGPV------------------SPSLEAVD-LDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTI 303 (326)
Q Consensus 245 ~~~~------------------~~~~~~~~-~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~ 303 (326)
+... ........ ..|+|++||++| +..+.++.+++++.. .+++++++++++|.....
T Consensus 239 ~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~--~~~~l~~~~g~~H~i~~E 316 (332)
T TIGR01607 239 FRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI--SNKELHTLEDMDHVITIE 316 (332)
T ss_pred cccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC--CCcEEEEECCCCCCCccC
Confidence 1110 00011111 349999999999 445566666555432 356899999999966532
Q ss_pred CCCCHHHHHHHHHHHHHhh
Q 020406 304 DPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 304 ~~~~~~~~~~~~~~~~fl~ 322 (326)
...+++++.+.+||+
T Consensus 317 ----~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 317 ----PGNEEVLKKIIEWIS 331 (332)
T ss_pred ----CCHHHHHHHHHHHhh
Confidence 236789999999986
No 61
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.68 E-value=1.6e-16 Score=134.00 Aligned_cols=100 Identities=25% Similarity=0.247 Sum_probs=69.4
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCch---HHHHHHHHHHHHHHHhhcCCCCcc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPA---AIEDGYMAVKWLQAQAVANEPDTW 149 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~~~~~ 149 (326)
..|+||++||.|. +... |..++..|. + ||.|+++|+++.+.+..+. .+++..+.+..+.+.
T Consensus 12 ~~~~li~~hg~~~---~~~~--~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~--------- 75 (251)
T TIGR02427 12 GAPVLVFINSLGT---DLRM--WDPVLPALT-P-DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH--------- 75 (251)
T ss_pred CCCeEEEEcCccc---chhh--HHHHHHHhh-c-ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------
Confidence 5689999997532 2222 556666554 4 8999999999876543322 334433333333332
Q ss_pred cccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 150 LTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 150 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
++.++++++|||+||.+++.+|.+ .++++++++++++..
T Consensus 76 ----~~~~~v~liG~S~Gg~~a~~~a~~--------~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 76 ----LGIERAVFCGLSLGGLIAQGLAAR--------RPDRVRALVLSNTAA 114 (251)
T ss_pred ----hCCCceEEEEeCchHHHHHHHHHH--------CHHHhHHHhhccCcc
Confidence 334689999999999999999988 778999999988653
No 62
>PRK11071 esterase YqiA; Provisional
Probab=99.68 E-value=1.9e-15 Score=122.28 Aligned_cols=177 Identities=18% Similarity=0.163 Sum_probs=104.6
Q ss_pred cEEEEEcCCccccCCCCCCcchh-HHHHHhhc--CCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccc
Q 020406 75 PIFYYIHGGGFCIGSRTWPNCQN-YCFKLASE--LQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLT 151 (326)
Q Consensus 75 p~vv~~HGgg~~~~~~~~~~~~~-~~~~la~~--~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 151 (326)
|.|||+||.+ ++... |.. .+..++.+ .++.|+++|++..+ ++..+.+..+.+.
T Consensus 2 p~illlHGf~---ss~~~--~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l~~~----------- 57 (190)
T PRK11071 2 STLLYLHGFN---SSPRS--AKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESLVLE----------- 57 (190)
T ss_pred CeEEEECCCC---CCcch--HHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHHHHH-----------
Confidence 6899999642 23221 332 23333333 37999999998753 2444455545443
Q ss_pred cccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccc------cCCCcccCCHHHHHH
Q 020406 152 EVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEA------EGPREAFLNLELIDR 225 (326)
Q Consensus 152 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 225 (326)
.+.++++++|+|+||.+|+.+|.+ .+. .+|+++|..+......... .....-.++...+..
T Consensus 58 --~~~~~~~lvG~S~Gg~~a~~~a~~--------~~~---~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 124 (190)
T PRK11071 58 --HGGDPLGLVGSSLGGYYATWLSQC--------FML---PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYD 124 (190)
T ss_pred --cCCCCeEEEEECHHHHHHHHHHHH--------cCC---CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHH
Confidence 223689999999999999999988 442 3588888765211100000 000001112222221
Q ss_pred HHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeec
Q 020406 226 FWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTI 303 (326)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~ 303 (326)
.... .. .... ...|++|+||++| ++.+.+.++++. +++++++|++|.|.
T Consensus 125 ~~~~-------------~~-~~i~------~~~~v~iihg~~De~V~~~~a~~~~~~-------~~~~~~~ggdH~f~-- 175 (190)
T PRK11071 125 LKVM-------------QI-DPLE------SPDLIWLLQQTGDEVLDYRQAVAYYAA-------CRQTVEEGGNHAFV-- 175 (190)
T ss_pred HHhc-------------CC-ccCC------ChhhEEEEEeCCCCcCCHHHHHHHHHh-------cceEEECCCCcchh--
Confidence 1110 00 0000 1238999999999 667777777773 36778899999884
Q ss_pred CCCCHHHHHHHHHHHHHhh
Q 020406 304 DPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 304 ~~~~~~~~~~~~~~~~fl~ 322 (326)
..++.++.+.+|++
T Consensus 176 -----~~~~~~~~i~~fl~ 189 (190)
T PRK11071 176 -----GFERYFNQIVDFLG 189 (190)
T ss_pred -----hHHHhHHHHHHHhc
Confidence 23788999999975
No 63
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.67 E-value=2.5e-15 Score=126.89 Aligned_cols=100 Identities=18% Similarity=0.058 Sum_probs=67.5
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccc
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEV 153 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~ 153 (326)
.|+||++||.+. +... |...+..+ + +|.|+++|+|+.+.+..+.. .+.....+++.+....
T Consensus 2 ~p~vvllHG~~~---~~~~--w~~~~~~l--~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~---------- 62 (242)
T PRK11126 2 LPWLVFLHGLLG---SGQD--WQPVGEAL--P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQS---------- 62 (242)
T ss_pred CCEEEEECCCCC---ChHH--HHHHHHHc--C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHH----------
Confidence 478999998633 2222 66777655 3 69999999998765543321 1233333333333222
Q ss_pred cCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCc-ceeEEEEecccc
Q 020406 154 ADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPV-RVKGYILLAPFF 200 (326)
Q Consensus 154 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~-~i~~~il~~p~~ 200 (326)
.+.++++++||||||.+|+.+|.+ .++ +++++++.++..
T Consensus 63 ~~~~~~~lvG~S~Gg~va~~~a~~--------~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 63 YNILPYWLVGYSLGGRIAMYYACQ--------GLAGGLCGLIVEGGNP 102 (242)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHh--------CCcccccEEEEeCCCC
Confidence 234799999999999999999998 544 499999987654
No 64
>PRK07581 hypothetical protein; Validated
Probab=99.66 E-value=7e-16 Score=136.94 Aligned_cols=129 Identities=16% Similarity=0.041 Sum_probs=77.6
Q ss_pred CceeeeeEecCCCC---eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHH---HHHhhcCCcEEEeecCCCC
Q 020406 45 SVVWKDVVFDPVHD---LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYC---FKLASELQAVIISPDYRLA 118 (326)
Q Consensus 45 ~~~~~~v~~~~~~~---~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~---~~la~~~g~~vi~~d~r~~ 118 (326)
.+.-.++++.+|.. +.+.+..-.....++.|+||+.||+++. ... +...+ ..+..+ +|.|+++|+|+.
T Consensus 9 ~~~~~~~~~~~g~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~---~~~--~~~~~~~~~~l~~~-~~~vi~~D~~G~ 82 (339)
T PRK07581 9 TFDLGDVELQSGATLPDARLAYKTYGTLNAAKDNAILYPTWYSGT---HQD--NEWLIGPGRALDPE-KYFIIIPNMFGN 82 (339)
T ss_pred EEeeCCeEecCCCCcCCceEEEEecCccCCCCCCEEEEeCCCCCC---ccc--chhhccCCCccCcC-ceEEEEecCCCC
Confidence 33445566666653 3343222111111345777777765432 221 21111 234433 799999999987
Q ss_pred CCCCCch---------------HHHHHHHHHHHHHHHhhcCCCCcccccccCCCc-EEEeecChhHHHHHHHHHHHHhCC
Q 020406 119 PENRLPA---------------AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGK-VFISGDSAGGNIAHNLAVRLKAGS 182 (326)
Q Consensus 119 ~~~~~~~---------------~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~-i~l~G~S~GG~~a~~~a~~~~~~~ 182 (326)
+.+..+. ..+|+......+.+. ++.++ ++|+||||||++|+.+|.+
T Consensus 83 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------lgi~~~~~lvG~S~GG~va~~~a~~----- 144 (339)
T PRK07581 83 GLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK-------------FGIERLALVVGWSMGAQQTYHWAVR----- 144 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH-------------hCCCceEEEEEeCHHHHHHHHHHHH-----
Confidence 6554321 134444444445443 33478 5799999999999999999
Q ss_pred CCCCCcceeEEEEecccc
Q 020406 183 LELAPVRVKGYILLAPFF 200 (326)
Q Consensus 183 ~~~~~~~i~~~il~~p~~ 200 (326)
+|++++++|++++..
T Consensus 145 ---~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 145 ---YPDMVERAAPIAGTA 159 (339)
T ss_pred ---CHHHHhhheeeecCC
Confidence 899999999997543
No 65
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.66 E-value=2.8e-15 Score=134.73 Aligned_cols=101 Identities=26% Similarity=0.246 Sum_probs=71.0
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC---chHHHHHHHHHHHHHHHhhcCCCCc
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL---PAAIEDGYMAVKWLQAQAVANEPDT 148 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~---~~~~~d~~~~~~~l~~~~~~~~~~~ 148 (326)
++.|.||++||.+ ++... |......|.. +|.|+++|+++.+.+.. ...+.++.+.+..+.+.
T Consensus 129 ~~~~~vl~~HG~~---~~~~~--~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~-------- 193 (371)
T PRK14875 129 GDGTPVVLIHGFG---GDLNN--WLFNHAALAA--GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA-------- 193 (371)
T ss_pred CCCCeEEEECCCC---Cccch--HHHHHHHHhc--CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh--------
Confidence 4568899999753 33332 5566666654 49999999998765421 22344444444443332
Q ss_pred ccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 149 WLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 149 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
++..+++++|||+||.+|+.+|.+ .+.++.++++++|..
T Consensus 194 -----~~~~~~~lvG~S~Gg~~a~~~a~~--------~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 194 -----LGIERAHLVGHSMGGAVALRLAAR--------APQRVASLTLIAPAG 232 (371)
T ss_pred -----cCCccEEEEeechHHHHHHHHHHh--------CchheeEEEEECcCC
Confidence 445789999999999999999988 778899999998753
No 66
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.66 E-value=2.9e-14 Score=122.47 Aligned_cols=102 Identities=18% Similarity=0.178 Sum_probs=71.1
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC----chHHHHHH-HHHHHHHHHhhcCCC
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL----PAAIEDGY-MAVKWLQAQAVANEP 146 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~----~~~~~d~~-~~~~~l~~~~~~~~~ 146 (326)
++.|.|||+||.+. +... |..+...|..+ ||.|+++|+++.+.+.. ...+++.. .+.+++.+..
T Consensus 16 ~~~p~vvliHG~~~---~~~~--w~~~~~~L~~~-g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~----- 84 (273)
T PLN02211 16 RQPPHFVLIHGISG---GSWC--WYKIRCLMENS-GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP----- 84 (273)
T ss_pred CCCCeEEEECCCCC---CcCc--HHHHHHHHHhC-CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC-----
Confidence 45689999998532 2232 66777766655 99999999997664321 12333333 3334443321
Q ss_pred CcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 147 DTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 147 ~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
+.++++|+||||||.+++.++.+ .+++++++|++++..
T Consensus 85 --------~~~~v~lvGhS~GG~v~~~~a~~--------~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 85 --------ENEKVILVGHSAGGLSVTQAIHR--------FPKKICLAVYVAATM 122 (273)
T ss_pred --------CCCCEEEEEECchHHHHHHHHHh--------ChhheeEEEEecccc
Confidence 12689999999999999999987 778999999997743
No 67
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.65 E-value=3.1e-16 Score=136.20 Aligned_cols=235 Identities=21% Similarity=0.186 Sum_probs=131.2
Q ss_pred CCceeeeeEecCCCC--eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCC
Q 020406 44 GSVVWKDVVFDPVHD--LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPEN 121 (326)
Q Consensus 44 ~~~~~~~v~~~~~~~--~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~ 121 (326)
..+...+|++.+-++ ++.+++.|... .++.|+||.+||.|...+. +.. ...++.. |++|+.+|.|+.+..
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~-~~~~Pavv~~hGyg~~~~~-----~~~-~~~~a~~-G~~vl~~d~rGqg~~ 123 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA-KGKLPAVVQFHGYGGRSGD-----PFD-LLPWAAA-GYAVLAMDVRGQGGR 123 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S-SSSEEEEEEE--TT--GGG-----HHH-HHHHHHT-T-EEEEE--TTTSSS
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC-CCCcCEEEEecCCCCCCCC-----ccc-ccccccC-CeEEEEecCCCCCCC
Confidence 356778888876554 77789999853 4889999999986533111 222 2345555 999999998843310
Q ss_pred C---------------------------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHH
Q 020406 122 R---------------------------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNL 174 (326)
Q Consensus 122 ~---------------------------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 174 (326)
. +...+.|+..+++++.+.. .+|.+||++.|.|+||.+++.+
T Consensus 124 ~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slp-----------evD~~rI~v~G~SqGG~lal~~ 192 (320)
T PF05448_consen 124 SPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLP-----------EVDGKRIGVTGGSQGGGLALAA 192 (320)
T ss_dssp S-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTST-----------TEEEEEEEEEEETHHHHHHHHH
T ss_pred CCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCC-----------CcCcceEEEEeecCchHHHHHH
Confidence 0 1135689999999999876 5899999999999999999999
Q ss_pred HHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCc-cCC-CCCCCCCc
Q 020406 175 AVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPL-INP-FGPVSPSL 252 (326)
Q Consensus 175 a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ 252 (326)
|.-+ ++|+++++..|++........... ... ....+..+++...+.. ...+. .+. -+-+..++
T Consensus 193 aaLd---------~rv~~~~~~vP~l~d~~~~~~~~~-~~~---~y~~~~~~~~~~d~~~--~~~~~v~~~L~Y~D~~nf 257 (320)
T PF05448_consen 193 AALD---------PRVKAAAADVPFLCDFRRALELRA-DEG---PYPEIRRYFRWRDPHH--EREPEVFETLSYFDAVNF 257 (320)
T ss_dssp HHHS---------ST-SEEEEESESSSSHHHHHHHT---ST---TTHHHHHHHHHHSCTH--CHHHHHHHHHHTT-HHHH
T ss_pred HHhC---------ccccEEEecCCCccchhhhhhcCC-ccc---cHHHHHHHHhccCCCc--ccHHHHHHHHhhhhHHHH
Confidence 9873 679999999997743221100000 000 0011111111100000 00000 000 00111122
Q ss_pred ccCCCCcEEEEEcCcCc--chhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHH-HHHHHHHhhhc
Q 020406 253 EAVDLDPILVVVGGSDL--LKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRL-MQIIKHFIAEN 324 (326)
Q Consensus 253 ~~~~~~P~lii~G~~D~--~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~-~~~~~~fl~~~ 324 (326)
.....+|+++..|-.|. ++...-..++.+. .+.++.+||..+|... .+. .++..+||++|
T Consensus 258 A~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~---~~K~l~vyp~~~He~~---------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 258 ARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP---GPKELVVYPEYGHEYG---------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp GGG--SEEEEEEETT-SSS-HHHHHHHHCC-----SSEEEEEETT--SSTT---------HHHHHHHHHHHHHH-
T ss_pred HHHcCCCEEEEEecCCCCCCchhHHHHHhccC---CCeeEEeccCcCCCch---------hhHHHHHHHHHHhcC
Confidence 22235599999999993 3333334444453 3579999999999443 344 78889999876
No 68
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.65 E-value=5.1e-14 Score=119.12 Aligned_cols=226 Identities=15% Similarity=0.112 Sum_probs=131.7
Q ss_pred ecCCCC-eEEEEEccCCCCCCCCcEEEEEcCCccccCC-CCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC-------C
Q 020406 53 FDPVHD-LSLRLYKPALPVSTKLPIFYYIHGGGFCIGS-RTWPNCQNYCFKLASELQAVIISPDYRLAPENR-------L 123 (326)
Q Consensus 53 ~~~~~~-~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~-~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~-------~ 123 (326)
+++..+ +...++.|.+. +++|+||++||.|..... .. .+..++..|+.+ ||.|+.+|||+.+.+. +
T Consensus 5 l~~~~g~~~~~~~~p~~~--~~~~~VlllHG~g~~~~~~~~--~~~~la~~La~~-Gy~Vl~~Dl~G~G~S~g~~~~~~~ 79 (266)
T TIGR03101 5 LDAPHGFRFCLYHPPVAV--GPRGVVIYLPPFAEEMNKSRR--MVALQARAFAAG-GFGVLQIDLYGCGDSAGDFAAARW 79 (266)
T ss_pred ecCCCCcEEEEEecCCCC--CCceEEEEECCCcccccchhH--HHHHHHHHHHHC-CCEEEEECCCCCCCCCCccccCCH
Confidence 344443 44445555543 457999999985432221 11 144456677655 9999999999775442 2
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCc
Q 020406 124 PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 124 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~ 203 (326)
....+|+..+++++++.. ..+++|+||||||.+++.++.+ .+..++++|+.+|+....
T Consensus 80 ~~~~~Dv~~ai~~L~~~~--------------~~~v~LvG~SmGG~vAl~~A~~--------~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 80 DVWKEDVAAAYRWLIEQG--------------HPPVTLWGLRLGALLALDAANP--------LAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred HHHHHHHHHHHHHHHhcC--------------CCCEEEEEECHHHHHHHHHHHh--------CccccceEEEeccccchH
Confidence 345688888999987642 2689999999999999999988 778999999999987643
Q ss_pred ccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCC----------CC------------ccCCCCCCCCCcccCCCCcEE
Q 020406 204 VRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTD----------HP------------LINPFGPVSPSLEAVDLDPIL 261 (326)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~------------~~~~~~~~~~~~~~~~~~P~l 261 (326)
...... +........ ........ .. ....+....-........+++
T Consensus 138 ~~l~~~--------lrl~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~ 205 (266)
T TIGR03101 138 QQLQQF--------LRLRLVARR----LGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVH 205 (266)
T ss_pred HHHHHH--------HHHHHHHHh----ccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceE
Confidence 221100 000000000 00000000 00 000000000000000022677
Q ss_pred EEEcCcC---cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHH
Q 020406 262 VVVGGSD---LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHF 320 (326)
Q Consensus 262 ii~G~~D---~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~f 320 (326)
++.-+.+ ...+....+++++++.|..++...++|. .|.. .+...+..+.++.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~~~~~--~~~~-~~~~~~~p~~~~~~~~~ 264 (266)
T TIGR03101 206 WFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDLVPGP--AFWQ-TQEIEEAPELIARTTAL 264 (266)
T ss_pred EEEeccccCCCCCHHHHHHHHHHHHcCCeEeeeecCCc--hhhc-chhhhHhHHHHHHHHhh
Confidence 7766433 4455778899999999999999999997 4442 33444444555554443
No 69
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.64 E-value=4.2e-15 Score=124.91 Aligned_cols=96 Identities=22% Similarity=0.090 Sum_probs=67.4
Q ss_pred cEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCccccccc
Q 020406 75 PIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVA 154 (326)
Q Consensus 75 p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 154 (326)
|.||++||.| ++... |...+..|+ + ++.|+.+|+|+.+.+.... ..++.+..+.+.+..
T Consensus 5 ~~iv~~HG~~---~~~~~--~~~~~~~l~-~-~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~------------- 63 (245)
T TIGR01738 5 VHLVLIHGWG---MNAEV--FRCLDEELS-A-HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQA------------- 63 (245)
T ss_pred ceEEEEcCCC---Cchhh--HHHHHHhhc-c-CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHhC-------------
Confidence 7899999753 33332 666666664 3 6999999999776543221 123334444444321
Q ss_pred CCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 155 DFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 155 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
.++++++|||+||.+++.++.+ +|++++++|++++..
T Consensus 64 -~~~~~lvG~S~Gg~~a~~~a~~--------~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 64 -PDPAIWLGWSLGGLVALHIAAT--------HPDRVRALVTVASSP 100 (245)
T ss_pred -CCCeEEEEEcHHHHHHHHHHHH--------CHHhhheeeEecCCc
Confidence 2689999999999999999988 788899999987654
No 70
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.64 E-value=4.2e-15 Score=126.67 Aligned_cols=95 Identities=20% Similarity=0.089 Sum_probs=66.9
Q ss_pred cEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCccccccc
Q 020406 75 PIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVA 154 (326)
Q Consensus 75 p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~ 154 (326)
|.||++||.| ++... |...+..|.. .|.|+.+|+|+.+.+..+.. .++.+..+.+.+ .
T Consensus 14 ~~ivllHG~~---~~~~~--w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~l~~--------------~ 71 (256)
T PRK10349 14 VHLVLLHGWG---LNAEV--WRCIDEELSS--HFTLHLVDLPGFGRSRGFGA-LSLADMAEAVLQ--------------Q 71 (256)
T ss_pred CeEEEECCCC---CChhH--HHHHHHHHhc--CCEEEEecCCCCCCCCCCCC-CCHHHHHHHHHh--------------c
Confidence 5699999753 23232 6677777754 49999999998765543321 122233333332 1
Q ss_pred CCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 155 DFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 155 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
..++++++|||+||.+|+.+|.+ .|.+++++|++++.
T Consensus 72 ~~~~~~lvGhS~Gg~ia~~~a~~--------~p~~v~~lili~~~ 108 (256)
T PRK10349 72 APDKAIWLGWSLGGLVASQIALT--------HPERVQALVTVASS 108 (256)
T ss_pred CCCCeEEEEECHHHHHHHHHHHh--------ChHhhheEEEecCc
Confidence 23789999999999999999988 88999999999864
No 71
>PLN02578 hydrolase
Probab=99.64 E-value=1.4e-14 Score=129.22 Aligned_cols=98 Identities=20% Similarity=0.085 Sum_probs=67.5
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCch---HHHH-HHHHHHHHHHHhhcCCCCc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPA---AIED-GYMAVKWLQAQAVANEPDT 148 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~---~~~d-~~~~~~~l~~~~~~~~~~~ 148 (326)
+.|.||++||.| ++... |...+..|+. +|.|+++|+++.+.+..+. ...+ ..++.+++.+.
T Consensus 85 ~g~~vvliHG~~---~~~~~--w~~~~~~l~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~-------- 149 (354)
T PLN02578 85 EGLPIVLIHGFG---ASAFH--WRYNIPELAK--KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV-------- 149 (354)
T ss_pred CCCeEEEECCCC---CCHHH--HHHHHHHHhc--CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh--------
Confidence 346789999753 22222 6566666653 5999999999876554321 2222 12333344332
Q ss_pred ccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 149 WLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 149 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
..++++++|||+||.+|+.+|.+ .++++++++++++.
T Consensus 150 ------~~~~~~lvG~S~Gg~ia~~~A~~--------~p~~v~~lvLv~~~ 186 (354)
T PLN02578 150 ------VKEPAVLVGNSLGGFTALSTAVG--------YPELVAGVALLNSA 186 (354)
T ss_pred ------ccCCeEEEEECHHHHHHHHHHHh--------ChHhcceEEEECCC
Confidence 12689999999999999999999 88999999999864
No 72
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.63 E-value=9.5e-15 Score=119.37 Aligned_cols=121 Identities=21% Similarity=0.242 Sum_probs=86.6
Q ss_pred eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC--CCCC----------CchH
Q 020406 59 LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLA--PENR----------LPAA 126 (326)
Q Consensus 59 ~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~--~~~~----------~~~~ 126 (326)
+++++|.|++...++.|+||++||.+....... ...-+..++.+.||+|+.|+-... .... -...
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~---~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d 77 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFA---AGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGD 77 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHH---hhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccc
Confidence 467899999764567899999999754321111 111245789999999999984321 1111 1112
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 127 IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 127 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
...+..+++++..+. .+|++||++.|+|.||.++..++.. +|+.|.++..+++...
T Consensus 78 ~~~i~~lv~~v~~~~-----------~iD~~RVyv~G~S~Gg~ma~~la~~--------~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 78 VAFIAALVDYVAARY-----------NIDPSRVYVTGLSNGGMMANVLACA--------YPDLFAAVAVVSGVPY 133 (220)
T ss_pred hhhHHHHHHhHhhhc-----------ccCCCceeeEEECHHHHHHHHHHHh--------CCccceEEEeeccccc
Confidence 334556677776654 6999999999999999999999998 8999999999987643
No 73
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.63 E-value=2e-14 Score=125.81 Aligned_cols=99 Identities=20% Similarity=0.144 Sum_probs=67.6
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc-----hHHHHHHHHHHHHHHHhhcCCCCc
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP-----AAIEDGYMAVKWLQAQAVANEPDT 148 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~ 148 (326)
.+.||++||++. +.. +......+.. .+|.|+++|+|+.+.+..+ ....|..+.+..+.+.
T Consensus 27 ~~~lvllHG~~~---~~~---~~~~~~~~~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~-------- 91 (306)
T TIGR01249 27 GKPVVFLHGGPG---SGT---DPGCRRFFDP-ETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREK-------- 91 (306)
T ss_pred CCEEEEECCCCC---CCC---CHHHHhccCc-cCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH--------
Confidence 457899998632 222 2122233333 4899999999987654422 2344555555555443
Q ss_pred ccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 149 WLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 149 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
++.++++++||||||.+++.++.+ ++++++++|+.+++.
T Consensus 92 -----l~~~~~~lvG~S~GG~ia~~~a~~--------~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 92 -----LGIKNWLVFGGSWGSTLALAYAQT--------HPEVVTGLVLRGIFL 130 (306)
T ss_pred -----cCCCCEEEEEECHHHHHHHHHHHH--------ChHhhhhheeecccc
Confidence 334689999999999999999998 788999999988654
No 74
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.62 E-value=1.8e-14 Score=125.73 Aligned_cols=220 Identities=19% Similarity=0.202 Sum_probs=123.4
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCC-CCCCc----hHHHHHHHHHHHHHHHhhcCCC
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAP-ENRLP----AAIEDGYMAVKWLQAQAVANEP 146 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~-~~~~~----~~~~d~~~~~~~l~~~~~~~~~ 146 (326)
...|.||++|| |..+... |...+..|....|+.|+++|..+.+ .+..+ -.+.+....+..+....
T Consensus 56 ~~~~pvlllHG--F~~~~~~---w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~----- 125 (326)
T KOG1454|consen 56 KDKPPVLLLHG--FGASSFS---WRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV----- 125 (326)
T ss_pred CCCCcEEEecc--ccCCccc---HhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-----
Confidence 56799999995 4443322 7788888888778999999998744 22222 23333333333332222
Q ss_pred CcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEE---EeccccCCcccCCccc-----------c-
Q 020406 147 DTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYI---LLAPFFGGTVRKKSEA-----------E- 211 (326)
Q Consensus 147 ~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~i---l~~p~~~~~~~~~~~~-----------~- 211 (326)
...+++++|||+||.+|+.+|.. +|+.+++++ ++.+............ .
T Consensus 126 --------~~~~~~lvghS~Gg~va~~~Aa~--------~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (326)
T KOG1454|consen 126 --------FVEPVSLVGHSLGGIVALKAAAY--------YPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALEL 189 (326)
T ss_pred --------cCcceEEEEeCcHHHHHHHHHHh--------CcccccceeeecccccccccCCcchhHHHHhhhhhccHhhh
Confidence 22569999999999999999999 999999999 5544332221110000 0
Q ss_pred -CCCcccCCHH-HHHHHHHhcCCC----C-------------------CCCCCCccCCCCC----CCCCcccCCCCcEEE
Q 020406 212 -GPREAFLNLE-LIDRFWRLSIPI----G-------------------ETTDHPLINPFGP----VSPSLEAVDLDPILV 262 (326)
Q Consensus 212 -~~~~~~~~~~-~~~~~~~~~~~~----~-------------------~~~~~~~~~~~~~----~~~~~~~~~~~P~li 262 (326)
.+........ ....++...... . .+........... ...........|++|
T Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvli 269 (326)
T KOG1454|consen 190 LIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLI 269 (326)
T ss_pred cCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEE
Confidence 0000000000 000000000000 0 0000000000000 000111222359999
Q ss_pred EEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhcCC
Q 020406 263 VVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAENSS 326 (326)
Q Consensus 263 i~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 326 (326)
++|+.| ++.+.+ ..+++...+++++++++++|.-+. +.++++.+.+..|++.+.+
T Consensus 270 i~G~~D~~~p~~~~----~~~~~~~pn~~~~~I~~~gH~~h~-----e~Pe~~~~~i~~Fi~~~~~ 326 (326)
T KOG1454|consen 270 IWGDKDQIVPLELA----EELKKKLPNAELVEIPGAGHLPHL-----ERPEEVAALLRSFIARLRP 326 (326)
T ss_pred EEcCcCCccCHHHH----HHHHhhCCCceEEEeCCCCccccc-----CCHHHHHHHHHHHHHHhcC
Confidence 999999 444434 444443467899999999995543 5689999999999988753
No 75
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.62 E-value=2.4e-14 Score=127.77 Aligned_cols=100 Identities=18% Similarity=0.099 Sum_probs=71.5
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc-------hHHHHHHHHHHHHHHHhhcCC
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP-------AAIEDGYMAVKWLQAQAVANE 145 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~-------~~~~d~~~~~~~l~~~~~~~~ 145 (326)
..|.||++||.+. +.. .|...+..|+ + +|.|+++|+++.+.+..+ ..+++..+.+..+.+.
T Consensus 126 ~~~~ivllHG~~~---~~~--~w~~~~~~L~-~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~----- 193 (383)
T PLN03084 126 NNPPVLLIHGFPS---QAY--SYRKVLPVLS-K-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE----- 193 (383)
T ss_pred CCCeEEEECCCCC---CHH--HHHHHHHHHh-c-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH-----
Confidence 4589999997532 222 2667777775 3 799999999977654332 2344444433333332
Q ss_pred CCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 146 PDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 146 ~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
+..++++|+|||+||.+++.++.+ +|++++++|+++|..
T Consensus 194 --------l~~~~~~LvG~s~GG~ia~~~a~~--------~P~~v~~lILi~~~~ 232 (383)
T PLN03084 194 --------LKSDKVSLVVQGYFSPPVVKYASA--------HPDKIKKLILLNPPL 232 (383)
T ss_pred --------hCCCCceEEEECHHHHHHHHHHHh--------ChHhhcEEEEECCCC
Confidence 233689999999999999999998 889999999999864
No 76
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.61 E-value=1.4e-15 Score=126.05 Aligned_cols=97 Identities=32% Similarity=0.330 Sum_probs=70.1
Q ss_pred EEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc-----hHHHHHHHHHHHHHHHhhcCCCCcccc
Q 020406 77 FYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP-----AAIEDGYMAVKWLQAQAVANEPDTWLT 151 (326)
Q Consensus 77 vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~~~~~ 151 (326)
||++||.+... . .|..++..|+ + ||.|+++|+|+.+.+..+ ..+++....+..+.+.
T Consensus 1 vv~~hG~~~~~---~--~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~----------- 62 (228)
T PF12697_consen 1 VVFLHGFGGSS---E--SWDPLAEALA-R-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDA----------- 62 (228)
T ss_dssp EEEE-STTTTG---G--GGHHHHHHHH-T-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHH-----------
T ss_pred eEEECCCCCCH---H--HHHHHHHHHh-C-CCEEEEEecCCccccccccccCCcchhhhhhhhhhcccc-----------
Confidence 79999874332 3 2777888774 4 999999999987665432 2334443333333333
Q ss_pred cccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 152 EVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 152 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
+..++++++|||+||.+++.++.+ .|++++++|+++|...
T Consensus 63 --~~~~~~~lvG~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 63 --LGIKKVILVGHSMGGMIALRLAAR--------YPDRVKGLVLLSPPPP 102 (228)
T ss_dssp --TTTSSEEEEEETHHHHHHHHHHHH--------SGGGEEEEEEESESSS
T ss_pred --cccccccccccccccccccccccc--------cccccccceeeccccc
Confidence 223789999999999999999998 8889999999998874
No 77
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.61 E-value=3.9e-15 Score=122.28 Aligned_cols=196 Identities=21% Similarity=0.233 Sum_probs=123.2
Q ss_pred CCCCeEEEEEccCCC-CCCCC-cEEEEEcCCccccCCCCCCcchhHHHHHhh----------cCCcEEEeecCCC---CC
Q 020406 55 PVHDLSLRLYKPALP-VSTKL-PIFYYIHGGGFCIGSRTWPNCQNYCFKLAS----------ELQAVIISPDYRL---AP 119 (326)
Q Consensus 55 ~~~~~~~~~~~P~~~-~~~~~-p~vv~~HGgg~~~~~~~~~~~~~~~~~la~----------~~g~~vi~~d~r~---~~ 119 (326)
++..++.++|.|.+. ++++. |.|||+||+|-. |+.. + ..+++ +.++-|++|.|.- ..
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~-g~dn---~----~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~ 241 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQG-GSDN---D----KVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADS 241 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCC-Cchh---h----hhhhcCccceeeecccCceEEEccccccccccc
Confidence 455699999999764 45666 999999998753 3322 1 22222 2345666666542 11
Q ss_pred CCCCchHHHHHHHHHH-HHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 120 ENRLPAAIEDGYMAVK-WLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 120 ~~~~~~~~~d~~~~~~-~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
+..-........+++. -+.++ |++|.+||.+.|.|+||+.+..++.+ .|+.+.+++++++
T Consensus 242 e~~t~~~l~~~idli~~vlas~-----------ynID~sRIYviGlSrG~~gt~al~~k--------fPdfFAaa~~iaG 302 (387)
T COG4099 242 EEKTLLYLIEKIDLILEVLAST-----------YNIDRSRIYVIGLSRGGFGTWALAEK--------FPDFFAAAVPIAG 302 (387)
T ss_pred ccccchhHHHHHHHHHHHHhhc-----------cCcccceEEEEeecCcchhhHHHHHh--------CchhhheeeeecC
Confidence 1111122333333333 33333 47999999999999999999999999 9999999999998
Q ss_pred ccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHH
Q 020406 199 FFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAED 276 (326)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~ 276 (326)
--+.... .+++ ...|+.+.|+++| .|.+.++-
T Consensus 303 ~~d~v~l------------------------------------v~~l----------k~~piWvfhs~dDkv~Pv~nSrv 336 (387)
T COG4099 303 GGDRVYL------------------------------------VRTL----------KKAPIWVFHSSDDKVIPVSNSRV 336 (387)
T ss_pred CCchhhh------------------------------------hhhh----------ccCceEEEEecCCCccccCccee
Confidence 5432110 1111 0239999999999 77888888
Q ss_pred HHHHHHHCCCcEEEEEeC---CCceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 277 YAKTLKNFGKKVEYVEFE---GKQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 277 ~~~~l~~~g~~~~l~~~~---~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
+.++++..+.++++..|. -..|++....+|. +.--...+.+||-+++
T Consensus 337 ~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~~g~w~--atyn~~eaieWLl~Qr 386 (387)
T COG4099 337 LYERLKALDRKVNYTAFLEGTTVLEGVDHSGVWW--ATYNDAEAIEWLLKQR 386 (387)
T ss_pred ehHHHHhhccccchhhhhhccccccccCCCCcce--eecCCHHHHHHHHhcc
Confidence 999999888777777666 2233333222211 1112345667775544
No 78
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.61 E-value=1.5e-14 Score=128.43 Aligned_cols=112 Identities=31% Similarity=0.473 Sum_probs=94.2
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCccccc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTE 152 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 152 (326)
.+-.|+.+|||||...+... ...+++.++...|+.++++||.+.|+.+||..++++.-++-|+.++...+|
T Consensus 395 S~sli~HcHGGGfVAqsSkS--HE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG------- 465 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKS--HEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLG------- 465 (880)
T ss_pred CceEEEEecCCceeeecccc--ccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhC-------
Confidence 45689999999998877764 888999999999999999999999999999999999999999999987766
Q ss_pred ccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 153 VADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 153 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
...+||+++|.|+||++.+..+.+. -.. .-..++|+++.+|
T Consensus 466 -~TgEriv~aGDSAGgNL~~~VaLr~--i~~--gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 466 -STGERIVLAGDSAGGNLCFTVALRA--IAY--GVRVPDGLMLAYP 506 (880)
T ss_pred -cccceEEEeccCCCcceeehhHHHH--HHh--CCCCCCceEEecC
Confidence 4458999999999999988887762 111 1245678888765
No 79
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.60 E-value=5.3e-14 Score=145.96 Aligned_cols=244 Identities=17% Similarity=0.147 Sum_probs=133.0
Q ss_pred eeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc--
Q 020406 47 VWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP-- 124 (326)
Q Consensus 47 ~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~-- 124 (326)
....+.+..+ ++...+.+-........|.|||+||.+. +... |..++..|.. +|.|+.+|+|+.+.+..+
T Consensus 1345 ~~~~~~v~~~-~~~~~i~~~~~G~~~~~~~vVllHG~~~---s~~~--w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~ 1416 (1655)
T PLN02980 1345 RTYELRVDVD-GFSCLIKVHEVGQNAEGSVVLFLHGFLG---TGED--WIPIMKAISG--SARCISIDLPGHGGSKIQNH 1416 (1655)
T ss_pred ceEEEEEccC-ceEEEEEEEecCCCCCCCeEEEECCCCC---CHHH--HHHHHHHHhC--CCEEEEEcCCCCCCCCCccc
Confidence 3344444433 3454443322212234689999997632 3222 6677777754 599999999977654321
Q ss_pred ---------hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEE
Q 020406 125 ---------AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYIL 195 (326)
Q Consensus 125 ---------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il 195 (326)
..++++.+.+..+.+. ++.++++|+||||||.+|+.++.+ +|++++++|+
T Consensus 1417 ~~~~~~~~~~si~~~a~~l~~ll~~-------------l~~~~v~LvGhSmGG~iAl~~A~~--------~P~~V~~lVl 1475 (1655)
T PLN02980 1417 AKETQTEPTLSVELVADLLYKLIEH-------------ITPGKVTLVGYSMGARIALYMALR--------FSDKIEGAVI 1475 (1655)
T ss_pred cccccccccCCHHHHHHHHHHHHHH-------------hCCCCEEEEEECHHHHHHHHHHHh--------ChHhhCEEEE
Confidence 1344444444333332 334799999999999999999998 8899999999
Q ss_pred eccccCCcccCCccccCC----CcccCCHHHHHHHHHhcCCCC------CC------------CCCC-----ccCCCC--
Q 020406 196 LAPFFGGTVRKKSEAEGP----REAFLNLELIDRFWRLSIPIG------ET------------TDHP-----LINPFG-- 246 (326)
Q Consensus 196 ~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~------~~------------~~~~-----~~~~~~-- 246 (326)
+++............... ....+.......+...+.... .. .... ....+.
T Consensus 1476 is~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1555 (1655)
T PLN02980 1476 ISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIG 1555 (1655)
T ss_pred ECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhc
Confidence 986432211100000000 000000000001111110000 00 0000 000000
Q ss_pred -CC--CCCcccCCCCcEEEEEcCcC-cchhhHHHHHHHHHHCC--------CcEEEEEeCCCceeeeecCCCCHHHHHHH
Q 020406 247 -PV--SPSLEAVDLDPILVVVGGSD-LLKDRAEDYAKTLKNFG--------KKVEYVEFEGKQHGFFTIDPNSEDANRLM 314 (326)
Q Consensus 247 -~~--~~~~~~~~~~P~lii~G~~D-~~~~~~~~~~~~l~~~g--------~~~~l~~~~~~~H~~~~~~~~~~~~~~~~ 314 (326)
.. ...+... ..|+|+++|++| .+.+.+.++.+.+.+.. ..+++++++++||.... ++++++.
T Consensus 1556 ~~~dl~~~L~~I-~~PtLlI~Ge~D~~~~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l-----E~Pe~f~ 1629 (1655)
T PLN02980 1556 RQPSLWEDLKQC-DTPLLLVVGEKDVKFKQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL-----ENPLPVI 1629 (1655)
T ss_pred ccchHHHHHhhC-CCCEEEEEECCCCccHHHHHHHHHHccccccccccccccceEEEEECCCCCchHH-----HCHHHHH
Confidence 00 0011111 349999999999 33445666777665421 13689999999996543 5678999
Q ss_pred HHHHHHhhhcC
Q 020406 315 QIIKHFIAENS 325 (326)
Q Consensus 315 ~~~~~fl~~~~ 325 (326)
+.+.+||++..
T Consensus 1630 ~~I~~FL~~~~ 1640 (1655)
T PLN02980 1630 RALRKFLTRLH 1640 (1655)
T ss_pred HHHHHHHHhcc
Confidence 99999998753
No 80
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.60 E-value=7.4e-14 Score=115.58 Aligned_cols=129 Identities=22% Similarity=0.343 Sum_probs=95.0
Q ss_pred eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHH
Q 020406 59 LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQ 138 (326)
Q Consensus 59 ~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~ 138 (326)
..+.+|.|+.. +..|+|||+||- ..-... |..++.++|+. ||+|+++|+...........+++....++|+.
T Consensus 4 ~~l~v~~P~~~--g~yPVv~f~~G~--~~~~s~---Ys~ll~hvASh-GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~ 75 (259)
T PF12740_consen 4 KPLLVYYPSSA--GTYPVVLFLHGF--LLINSW---YSQLLEHVASH-GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLA 75 (259)
T ss_pred CCeEEEecCCC--CCcCEEEEeCCc--CCCHHH---HHHHHHHHHhC-ceEEEEecccccCCCCcchhHHHHHHHHHHHH
Confidence 56789999875 889999999964 322222 77888888877 99999999554333445567888899999988
Q ss_pred HHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 139 AQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 139 ~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
+...... + .....|.+++.|+|||.||-+|..++... .......++++++++.|+-.
T Consensus 76 ~~L~~~l--~-~~v~~D~s~l~l~GHSrGGk~Af~~al~~---~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 76 KGLESKL--P-LGVKPDFSKLALAGHSRGGKVAFAMALGN---ASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred hcchhhc--c-ccccccccceEEeeeCCCCHHHHHHHhhh---cccccccceeEEEEeccccc
Confidence 7543321 1 11236889999999999999999999871 11111468999999999763
No 81
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.60 E-value=9.8e-14 Score=107.38 Aligned_cols=196 Identities=21% Similarity=0.251 Sum_probs=126.4
Q ss_pred eeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC-----
Q 020406 48 WKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR----- 122 (326)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~----- 122 (326)
+.+|.++...+.---.|.|.. ..+.|+.|.+|--.-..|+.... ....+.+.+.+.|+.++.+|||+-+.+.
T Consensus 4 ~~~v~i~Gp~G~le~~~~~~~--~~~~~iAli~HPHPl~gGtm~nk-vv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~ 80 (210)
T COG2945 4 MPTVIINGPAGRLEGRYEPAK--TPAAPIALICHPHPLFGGTMNNK-VVQTLARALVKRGFATLRFNFRGVGRSQGEFDN 80 (210)
T ss_pred CCcEEecCCcccceeccCCCC--CCCCceEEecCCCccccCccCCH-HHHHHHHHHHhCCceEEeecccccccccCcccC
Confidence 345555544332222455554 36789999999643334443321 1223444455669999999999644332
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC
Q 020406 123 LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 123 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~ 202 (326)
....++|+..+++|++++.+. .....+.|+|.|+++++.+|.+. +.+...+.++|....
T Consensus 81 GiGE~~Da~aaldW~~~~hp~------------s~~~~l~GfSFGa~Ia~~la~r~---------~e~~~~is~~p~~~~ 139 (210)
T COG2945 81 GIGELEDAAAALDWLQARHPD------------SASCWLAGFSFGAYIAMQLAMRR---------PEILVFISILPPINA 139 (210)
T ss_pred CcchHHHHHHHHHHHHhhCCC------------chhhhhcccchHHHHHHHHHHhc---------ccccceeeccCCCCc
Confidence 234789999999999998643 23347899999999999999882 456667777765531
Q ss_pred cccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHH
Q 020406 203 TVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLK 282 (326)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~ 282 (326)
.. .....|. -.|.++++|+.|.. ..+.+.++
T Consensus 140 ~d----------------------------------fs~l~P~-----------P~~~lvi~g~~Ddv----v~l~~~l~ 170 (210)
T COG2945 140 YD----------------------------------FSFLAPC-----------PSPGLVIQGDADDV----VDLVAVLK 170 (210)
T ss_pred hh----------------------------------hhhccCC-----------CCCceeEecChhhh----hcHHHHHH
Confidence 00 0011110 11999999999932 33444544
Q ss_pred H-CCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 283 N-FGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 283 ~-~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
. .+.+.+++++++++|-|.- ....+.+.+.+||.
T Consensus 171 ~~~~~~~~~i~i~~a~HFF~g------Kl~~l~~~i~~~l~ 205 (210)
T COG2945 171 WQESIKITVITIPGADHFFHG------KLIELRDTIADFLE 205 (210)
T ss_pred hhcCCCCceEEecCCCceecc------cHHHHHHHHHHHhh
Confidence 2 2467799999999996653 45788888999984
No 82
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.59 E-value=9.4e-14 Score=116.86 Aligned_cols=115 Identities=18% Similarity=0.191 Sum_probs=79.1
Q ss_pred CCceeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC
Q 020406 44 GSVVWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL 123 (326)
Q Consensus 44 ~~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~ 123 (326)
....++.+..++++-+.+++..+.. ..+.|.||.+||- .|+...+....++..+..+ ||.|+.+++|+++....
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~--~~~~P~vVl~HGL---~G~s~s~y~r~L~~~~~~r-g~~~Vv~~~Rgcs~~~n 120 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPR--AAKKPLVVLFHGL---EGSSNSPYARGLMRALSRR-GWLVVVFHFRGCSGEAN 120 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCcc--ccCCceEEEEecc---CCCCcCHHHHHHHHHHHhc-CCeEEEEecccccCCcc
Confidence 3445667777887778888887543 2567999999974 3443332233344445445 99999999998765432
Q ss_pred -------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 124 -------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 124 -------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
....+|+..++++++.... +.++..+|.|+||.+-+.+..+
T Consensus 121 ~~p~~yh~G~t~D~~~~l~~l~~~~~-------------~r~~~avG~SLGgnmLa~ylge 168 (345)
T COG0429 121 TSPRLYHSGETEDIRFFLDWLKARFP-------------PRPLYAVGFSLGGNMLANYLGE 168 (345)
T ss_pred cCcceecccchhHHHHHHHHHHHhCC-------------CCceEEEEecccHHHHHHHHHh
Confidence 2345899999999998643 3799999999999544444433
No 83
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.59 E-value=1.5e-13 Score=123.60 Aligned_cols=64 Identities=25% Similarity=0.356 Sum_probs=52.2
Q ss_pred CCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeC-CCceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 257 LDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFE-GKQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 257 ~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~-~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
..|+|+|+|++| ++.+.++++++.+...+..+++.+++ ++||...+ ++++++.+.+.+||+++.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l-----e~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL-----LDDPRYGRLVRAFLERAA 375 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh-----cCHHHHHHHHHHHHHhhh
Confidence 449999999999 55777888999998877777888885 99995443 567889999999998764
No 84
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.58 E-value=1.3e-13 Score=122.95 Aligned_cols=61 Identities=30% Similarity=0.427 Sum_probs=45.9
Q ss_pred CCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEE-eCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 257 LDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVE-FEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 257 ~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~-~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
..|+|+++|++| ++.+.++.+++.+......++++. +++++|...+ ++++++.+.+.+||+
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l-----e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL-----VETDQVEELIRGFLR 351 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh-----cCHHHHHHHHHHHhC
Confidence 349999999999 566678888888876543344444 4689995543 467899999999985
No 85
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.58 E-value=2e-14 Score=127.79 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=46.0
Q ss_pred CCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCC-CceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 257 LDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEG-KQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 257 ~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
..|+||++|++| ++.+.++++++.+. .+.+++++++ +||...+ ++++++.+.+.+||+++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~---p~a~l~~i~~~aGH~~~l-----E~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG---PRGSLRVLRSPYGHDAFL-----KETDRIDAILTTALRSTG 340 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC---CCCeEEEEeCCccHHHHh-----cCHHHHHHHHHHHHHhcc
Confidence 449999999999 34456666666552 2468999985 8995543 567899999999998753
No 86
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.57 E-value=1.3e-12 Score=117.62 Aligned_cols=192 Identities=16% Similarity=0.081 Sum_probs=123.6
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCC----cEEEeecCCCC----CCCCC-chHHH
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQ----AVIISPDYRLA----PENRL-PAAIE 128 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g----~~vi~~d~r~~----~~~~~-~~~~~ 128 (326)
...+.+|.|.+...++.|+|+++||..|..... ....+..+.++ | .+++.+|.... .+... ....+
T Consensus 193 ~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~----~~~~ld~li~~-g~i~P~ivV~id~~~~~~R~~el~~~~~f~~ 267 (411)
T PRK10439 193 SRRVWIYTTGDAAPEERPLAILLDGQFWAESMP----VWPALDSLTHR-GQLPPAVYLLIDAIDTTHRSQELPCNADFWL 267 (411)
T ss_pred ceEEEEEECCCCCCCCCCEEEEEECHHhhhcCC----HHHHHHHHHHc-CCCCceEEEEECCCCcccccccCCchHHHHH
Confidence 578899999765446789999999987753221 33455666655 4 45677775211 11111 11222
Q ss_pred HH-HHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCC
Q 020406 129 DG-YMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKK 207 (326)
Q Consensus 129 d~-~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~ 207 (326)
.+ .+++-++.++.. ...|+++.+|+|+||||..|+.++.+ +|+.|.+++++||.+.......
T Consensus 268 ~l~~eLlP~I~~~y~---------~~~d~~~~~IaG~S~GGl~AL~~al~--------~Pd~Fg~v~s~Sgs~ww~~~~~ 330 (411)
T PRK10439 268 AVQQELLPQVRAIAP---------FSDDADRTVVAGQSFGGLAALYAGLH--------WPERFGCVLSQSGSFWWPHRGG 330 (411)
T ss_pred HHHHHHHHHHHHhCC---------CCCCccceEEEEEChHHHHHHHHHHh--------CcccccEEEEeccceecCCccC
Confidence 22 224445555431 13577899999999999999999999 9999999999999764321100
Q ss_pred ccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC-cchhhHHHHHHHHHHCCC
Q 020406 208 SEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD-LLKDRAEDYAKTLKNFGK 286 (326)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D-~~~~~~~~~~~~l~~~g~ 286 (326)
. ........+... ..... ...++|.+|+.| ...+.++++++.|+++|.
T Consensus 331 ----~-----~~~~l~~~l~~~-----------------~~~~~-----~lr~~i~~G~~E~~~~~~~~~l~~~L~~~G~ 379 (411)
T PRK10439 331 ----Q-----QEGVLLEQLKAG-----------------EVSAR-----GLRIVLEAGRREPMIMRANQALYAQLHPAGH 379 (411)
T ss_pred ----C-----chhHHHHHHHhc-----------------ccCCC-----CceEEEeCCCCCchHHHHHHHHHHHHHHCCC
Confidence 0 000011111000 00000 126899999999 777889999999999999
Q ss_pred cEEEEEeCCCceeeeec
Q 020406 287 KVEYVEFEGKQHGFFTI 303 (326)
Q Consensus 287 ~~~l~~~~~~~H~~~~~ 303 (326)
++++.+++| +|.+..+
T Consensus 380 ~~~~~~~~G-GHd~~~W 395 (411)
T PRK10439 380 SVFWRQVDG-GHDALCW 395 (411)
T ss_pred cEEEEECCC-CcCHHHH
Confidence 999999998 6977654
No 87
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.54 E-value=5.4e-13 Score=116.34 Aligned_cols=138 Identities=15% Similarity=0.044 Sum_probs=101.7
Q ss_pred CCCCCceeeeeEecCCCCeEEEEEccCCC----CCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCC
Q 020406 41 HDDGSVVWKDVVFDPVHDLSLRLYKPALP----VSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYR 116 (326)
Q Consensus 41 ~~~~~~~~~~v~~~~~~~~~~~~~~P~~~----~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r 116 (326)
.+....+++-++.++|+.+.++++.+... ..+..|+||++||- ..++.+. |-.-+...+.+.||.|+.++.|
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGl--tg~S~~~--YVr~lv~~a~~~G~r~VVfN~R 163 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGL--TGGSHES--YVRHLVHEAQRKGYRVVVFNHR 163 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCC--CCCChhH--HHHHHHHHHHhCCcEEEEECCC
Confidence 34456677778888888899999977543 13567999999964 3344432 5555555666779999999999
Q ss_pred CCCCCCC-------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcc
Q 020406 117 LAPENRL-------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVR 189 (326)
Q Consensus 117 ~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~ 189 (326)
+.+..+. ....+|+..++++++++.+. .++..+|+||||++...++.+. .. ..+.
T Consensus 164 G~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~-------------a~l~avG~S~Gg~iL~nYLGE~---g~--~~~l 225 (409)
T KOG1838|consen 164 GLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQ-------------APLFAVGFSMGGNILTNYLGEE---GD--NTPL 225 (409)
T ss_pred CCCCCccCCCceeecCCHHHHHHHHHHHHHhCCC-------------CceEEEEecchHHHHHHHhhhc---cC--CCCc
Confidence 8665443 23678999999999998755 6899999999999999998762 11 2255
Q ss_pred eeEEEEecccc
Q 020406 190 VKGYILLAPFF 200 (326)
Q Consensus 190 i~~~il~~p~~ 200 (326)
+.|+.+.+|+-
T Consensus 226 ~~a~~v~~Pwd 236 (409)
T KOG1838|consen 226 IAAVAVCNPWD 236 (409)
T ss_pred eeEEEEeccch
Confidence 66666667764
No 88
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.52 E-value=1.3e-13 Score=112.15 Aligned_cols=217 Identities=21% Similarity=0.150 Sum_probs=134.3
Q ss_pred CceeeeeEecCCC--CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCC-
Q 020406 45 SVVWKDVVFDPVH--DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPEN- 121 (326)
Q Consensus 45 ~~~~~~v~~~~~~--~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~- 121 (326)
.+...++++++-+ .|+.++..|... +++.|+||..||.+...+. +.+++ .++.. ||.|+.+|.|+-+.+
T Consensus 53 ~ve~ydvTf~g~~g~rI~gwlvlP~~~-~~~~P~vV~fhGY~g~~g~-----~~~~l-~wa~~-Gyavf~MdvRGQg~~~ 124 (321)
T COG3458 53 RVEVYDVTFTGYGGARIKGWLVLPRHE-KGKLPAVVQFHGYGGRGGE-----WHDML-HWAVA-GYAVFVMDVRGQGSSS 124 (321)
T ss_pred ceEEEEEEEeccCCceEEEEEEeeccc-CCccceEEEEeeccCCCCC-----ccccc-ccccc-ceeEEEEecccCCCcc
Confidence 5667788887655 488889999763 5899999999975433222 22332 24444 999999999943211
Q ss_pred ----------C-----------------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHH
Q 020406 122 ----------R-----------------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNL 174 (326)
Q Consensus 122 ----------~-----------------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 174 (326)
. +.....|+..+++-+.+.. .+|.+||++.|.|.||.+++..
T Consensus 125 ~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~-----------~vde~Ri~v~G~SqGGglalaa 193 (321)
T COG3458 125 QDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLD-----------EVDEERIGVTGGSQGGGLALAA 193 (321)
T ss_pred ccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccC-----------ccchhheEEeccccCchhhhhh
Confidence 1 1234678888888887764 5899999999999999999998
Q ss_pred HHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCC-CCCCCCcc
Q 020406 175 AVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPF-GPVSPSLE 253 (326)
Q Consensus 175 a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 253 (326)
+..+ ++|++++...|++........... .-....+..+++..-+.. ......+ +-+..+++
T Consensus 194 aal~---------~rik~~~~~~Pfl~df~r~i~~~~-----~~~ydei~~y~k~h~~~e----~~v~~TL~yfD~~n~A 255 (321)
T COG3458 194 AALD---------PRIKAVVADYPFLSDFPRAIELAT-----EGPYDEIQTYFKRHDPKE----AEVFETLSYFDIVNLA 255 (321)
T ss_pred hhcC---------hhhhcccccccccccchhheeecc-----cCcHHHHHHHHHhcCchH----HHHHHHHhhhhhhhHH
Confidence 8753 899999999998865433211100 011122333333222110 0000000 01112222
Q ss_pred cCCCCcEEEEEcCcCcchhhHHHHH--HHHHHCCCcEEEEEeCCCceeee
Q 020406 254 AVDLDPILVVVGGSDLLKDRAEDYA--KTLKNFGKKVEYVEFEGKQHGFF 301 (326)
Q Consensus 254 ~~~~~P~lii~G~~D~~~~~~~~~~--~~l~~~g~~~~l~~~~~~~H~~~ 301 (326)
.....|+|+..|--|..++.+..|+ +++. ...++.+|+--+|...
T Consensus 256 ~RiK~pvL~svgL~D~vcpPstqFA~yN~l~---~~K~i~iy~~~aHe~~ 302 (321)
T COG3458 256 ARIKVPVLMSVGLMDPVCPPSTQFAAYNALT---TSKTIEIYPYFAHEGG 302 (321)
T ss_pred HhhccceEEeecccCCCCCChhhHHHhhccc---CCceEEEeeccccccC
Confidence 2235599999999994444444444 3333 3458889998889543
No 89
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.50 E-value=5.4e-12 Score=121.81 Aligned_cols=200 Identities=14% Similarity=0.080 Sum_probs=116.2
Q ss_pred HHHhhcCCcEEEeecCCCCCCCC------CchHHHHHHHHHHHHHHHhhcCC--------CCcccccccCCCcEEEeecC
Q 020406 100 FKLASELQAVIISPDYRLAPENR------LPAAIEDGYMAVKWLQAQAVANE--------PDTWLTEVADFGKVFISGDS 165 (326)
Q Consensus 100 ~~la~~~g~~vi~~d~r~~~~~~------~~~~~~d~~~~~~~l~~~~~~~~--------~~~~~~~~~d~~~i~l~G~S 165 (326)
..++.+ ||+|+..|.|+...+. .+...+|..++|+|+..+...+. +.+ --..+|+++|.|
T Consensus 273 ~~~~~r-GYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~-----WsnGkVGm~G~S 346 (767)
T PRK05371 273 DYFLPR-GFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKAD-----WSNGKVAMTGKS 346 (767)
T ss_pred HHHHhC-CeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccC-----CCCCeeEEEEEc
Confidence 445544 9999999999654432 25677899999999996532100 000 113799999999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCcc--ccCCCc-ccCCHHHHH-----------------H
Q 020406 166 AGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSE--AEGPRE-AFLNLELID-----------------R 225 (326)
Q Consensus 166 ~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~--~~~~~~-~~~~~~~~~-----------------~ 225 (326)
+||.++..+|.. .++.++++|..+++.++....... ...+.. +......+. .
T Consensus 347 Y~G~~~~~aAa~--------~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~ 418 (767)
T PRK05371 347 YLGTLPNAVATT--------GVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNE 418 (767)
T ss_pred HHHHHHHHHHhh--------CCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchH
Confidence 999999999988 778899999998876543221100 000000 000000000 0
Q ss_pred HHHhcCC---CCCCC----CC--C-ccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEe
Q 020406 226 FWRLSIP---IGETT----DH--P-LINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEF 293 (326)
Q Consensus 226 ~~~~~~~---~~~~~----~~--~-~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~ 293 (326)
.+..... ..... .. + ..+++..... ...|+|++||..| +...++.++++++++.+.+.++.+.
T Consensus 419 ~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~k-----IkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~ 493 (767)
T PRK05371 419 ACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADK-----IKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH 493 (767)
T ss_pred HHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhC-----CCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe
Confidence 0000000 00000 00 0 0111111111 2459999999999 5566888999999998888888877
Q ss_pred CCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 294 EGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 294 ~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
++ +|..... ....++.+.+.+|+..
T Consensus 494 ~g-~H~~~~~----~~~~d~~e~~~~Wfd~ 518 (767)
T PRK05371 494 QG-GHVYPNN----WQSIDFRDTMNAWFTH 518 (767)
T ss_pred CC-CccCCCc----hhHHHHHHHHHHHHHh
Confidence 66 6854321 2345566666777644
No 90
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.50 E-value=1.9e-12 Score=121.96 Aligned_cols=125 Identities=20% Similarity=0.160 Sum_probs=91.6
Q ss_pred CCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC-----C-chHHH
Q 020406 55 PVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR-----L-PAAIE 128 (326)
Q Consensus 55 ~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~-----~-~~~~~ 128 (326)
++..+.+++|.|.+. ++.|+||++||.|........ ........++.+ ||.|+.+|+|+.+.+. + ....+
T Consensus 5 DG~~L~~~~~~P~~~--~~~P~Il~~~gyg~~~~~~~~-~~~~~~~~l~~~-Gy~vv~~D~RG~g~S~g~~~~~~~~~~~ 80 (550)
T TIGR00976 5 DGTRLAIDVYRPAGG--GPVPVILSRTPYGKDAGLRWG-LDKTEPAWFVAQ-GYAVVIQDTRGRGASEGEFDLLGSDEAA 80 (550)
T ss_pred CCCEEEEEEEecCCC--CCCCEEEEecCCCCchhhccc-cccccHHHHHhC-CcEEEEEeccccccCCCceEecCcccch
Confidence 344577789999763 578999999976543221010 011234456655 9999999999765432 2 55788
Q ss_pred HHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCc
Q 020406 129 DGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 129 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~ 203 (326)
|+.++++|+.++. ..+ .+|+++|+|+||.+++.+|.. .++.+++++..++..+..
T Consensus 81 D~~~~i~~l~~q~-----------~~~-~~v~~~G~S~GG~~a~~~a~~--------~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 81 DGYDLVDWIAKQP-----------WCD-GNVGMLGVSYLAVTQLLAAVL--------QPPALRAIAPQEGVWDLY 135 (550)
T ss_pred HHHHHHHHHHhCC-----------CCC-CcEEEEEeChHHHHHHHHhcc--------CCCceeEEeecCcccchh
Confidence 9999999998774 133 699999999999999999987 778999999998876544
No 91
>PLN02872 triacylglycerol lipase
Probab=99.50 E-value=1.1e-12 Score=117.34 Aligned_cols=135 Identities=17% Similarity=0.075 Sum_probs=79.3
Q ss_pred ceeeeeEecCCCCeEEEEEccCCC--CCCCCcEEEEEcCCccccCCCCCCc-chhHHHHHhhcCCcEEEeecCCCCCCC-
Q 020406 46 VVWKDVVFDPVHDLSLRLYKPALP--VSTKLPIFYYIHGGGFCIGSRTWPN-CQNYCFKLASELQAVIISPDYRLAPEN- 121 (326)
Q Consensus 46 ~~~~~v~~~~~~~~~~~~~~P~~~--~~~~~p~vv~~HGgg~~~~~~~~~~-~~~~~~~la~~~g~~vi~~d~r~~~~~- 121 (326)
++...|+.++|.-+.++.+.+... ...++|+|+++||.+.......... ....+..|+.+ ||.|+.+|.|+...+
T Consensus 44 ~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~-GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 44 CTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADH-GFDVWVGNVRGTRWSY 122 (395)
T ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhC-CCCccccccccccccc
Confidence 334444444444566654433221 1234689999998643322211000 12334456655 999999999974321
Q ss_pred ---------------CCchH-HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCC
Q 020406 122 ---------------RLPAA-IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLEL 185 (326)
Q Consensus 122 ---------------~~~~~-~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~ 185 (326)
.+... ..|+.++++++.+.. .++++++|||+||.+++.++.+ + +
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~--------------~~~v~~VGhS~Gg~~~~~~~~~---p--~- 182 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT--------------NSKIFIVGHSQGTIMSLAALTQ---P--N- 182 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc--------------CCceEEEEECHHHHHHHHHhhC---h--H-
Confidence 11122 368888999987532 2689999999999999855532 0 0
Q ss_pred CCcceeEEEEeccccC
Q 020406 186 APVRVKGYILLAPFFG 201 (326)
Q Consensus 186 ~~~~i~~~il~~p~~~ 201 (326)
...+++.+++++|...
T Consensus 183 ~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 183 VVEMVEAAALLCPISY 198 (395)
T ss_pred HHHHHHHHHHhcchhh
Confidence 1136777888887643
No 92
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.49 E-value=4.8e-13 Score=117.52 Aligned_cols=234 Identities=14% Similarity=0.097 Sum_probs=121.8
Q ss_pred CceeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC--
Q 020406 45 SVVWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR-- 122 (326)
Q Consensus 45 ~~~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~-- 122 (326)
.++.-+|.+.+ ..+...++.|.+ .++.|+||++-|. .+.... +.......+...|++++.+|.++.+.+.
T Consensus 164 ~i~~v~iP~eg-~~I~g~LhlP~~--~~p~P~VIv~gGl---Ds~qeD--~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~ 235 (411)
T PF06500_consen 164 PIEEVEIPFEG-KTIPGYLHLPSG--EKPYPTVIVCGGL---DSLQED--LYRLFRDYLAPRGIAMLTVDMPGQGESPKW 235 (411)
T ss_dssp EEEEEEEEETT-CEEEEEEEESSS--SS-EEEEEEE--T---TS-GGG--GHHHHHCCCHHCT-EEEEE--TTSGGGTTT
T ss_pred CcEEEEEeeCC-cEEEEEEEcCCC--CCCCCEEEEeCCc---chhHHH--HHHHHHHHHHhCCCEEEEEccCCCcccccC
Confidence 45555666654 568888899985 4788988887542 233221 3333333333449999999999765432
Q ss_pred -Cc-hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 123 -LP-AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 123 -~~-~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
+. +.-.-...+++||.+.. .+|.+||+++|.|+||++|..+|.. .+++++++|...|.+
T Consensus 236 ~l~~D~~~l~~aVLd~L~~~p-----------~VD~~RV~~~G~SfGGy~AvRlA~l--------e~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 236 PLTQDSSRLHQAVLDYLASRP-----------WVDHTRVGAWGFSFGGYYAVRLAAL--------EDPRLKAVVALGAPV 296 (411)
T ss_dssp -S-S-CCHHHHHHHHHHHHST-----------TEEEEEEEEEEETHHHHHHHHHHHH--------TTTT-SEEEEES---
T ss_pred CCCcCHHHHHHHHHHHHhcCC-----------ccChhheEEEEeccchHHHHHHHHh--------cccceeeEeeeCchH
Confidence 11 11111346788888765 5999999999999999999999976 568999999999875
Q ss_pred CCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCC---CccCCCCCCCC-Cc-ccCCCCcEEEEEcCcCcc--hhh
Q 020406 201 GGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDH---PLINPFGPVSP-SL-EAVDLDPILVVVGGSDLL--KDR 273 (326)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~-~~~~~~P~lii~G~~D~~--~~~ 273 (326)
........... -.+....+.+.... +....... .....+.-... .+ ...-..|+|.+.|++|++ .++
T Consensus 297 h~~ft~~~~~~-----~~P~my~d~LA~rl-G~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD 370 (411)
T PF06500_consen 297 HHFFTDPEWQQ-----RVPDMYLDVLASRL-GMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIED 370 (411)
T ss_dssp SCGGH-HHHHT-----TS-HHHHHHHHHHC-T-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHH
T ss_pred hhhhccHHHHh-----cCCHHHHHHHHHHh-CCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHH
Confidence 43322111100 11122222222221 11100000 00111111111 11 011134999999999933 444
Q ss_pred HHHHHHHHHHCCCcEEEEEeCCCc-eeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 274 AEDYAKTLKNFGKKVEYVEFEGKQ-HGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 274 ~~~~~~~l~~~g~~~~l~~~~~~~-H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
... +...+.+-+...++... | ...++.+..+.+||+++
T Consensus 371 ~~l----ia~~s~~gk~~~~~~~~~~---------~gy~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 371 SRL----IAESSTDGKALRIPSKPLH---------MGYPQALDEIYKWLEDK 409 (411)
T ss_dssp HHH----HHHTBTT-EEEEE-SSSHH---------HHHHHHHHHHHHHHHHH
T ss_pred HHH----HHhcCCCCceeecCCCccc---------cchHHHHHHHHHHHHHh
Confidence 433 33334444566666543 5 34578999999999763
No 93
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.46 E-value=2.3e-12 Score=101.44 Aligned_cols=206 Identities=17% Similarity=0.192 Sum_probs=123.3
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC-------CchHHHHHHHHHHHHHHHhhcC
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR-------LPAAIEDGYMAVKWLQAQAVAN 144 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~-------~~~~~~d~~~~~~~l~~~~~~~ 144 (326)
+...++|++|| |. .+... -+...++...++.|+-++.+||++.+++. +....+|+..+++++....
T Consensus 31 gs~e~vvlcHG--fr-S~Kn~-~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n--- 103 (269)
T KOG4667|consen 31 GSTEIVVLCHG--FR-SHKNA-IIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN--- 103 (269)
T ss_pred CCceEEEEeec--cc-cccch-HHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc---
Confidence 56689999995 33 33221 13333344444569999999999766543 3456789999999987632
Q ss_pred CCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHH
Q 020406 145 EPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELID 224 (326)
Q Consensus 145 ~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (326)
..=-+|+|||-||.+++.++.+. ..+.-+|.+++-++........ +....+.
T Consensus 104 -----------r~v~vi~gHSkGg~Vvl~ya~K~---------~d~~~viNcsGRydl~~~I~eR--------lg~~~l~ 155 (269)
T KOG4667|consen 104 -----------RVVPVILGHSKGGDVVLLYASKY---------HDIRNVINCSGRYDLKNGINER--------LGEDYLE 155 (269)
T ss_pred -----------eEEEEEEeecCccHHHHHHHHhh---------cCchheEEcccccchhcchhhh--------hcccHHH
Confidence 22357899999999999999983 3377788888876654332100 0011111
Q ss_pred HHHHh-cCCCCC-CCCCCc----cCCCCCC-----CCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEE
Q 020406 225 RFWRL-SIPIGE-TTDHPL----INPFGPV-----SPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYV 291 (326)
Q Consensus 225 ~~~~~-~~~~~~-~~~~~~----~~~~~~~-----~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~ 291 (326)
+..+. ++.... ...++. .+.+... ...+.-...+|+|=+||..| +|++.+.+|++.++.. +++
T Consensus 156 ~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH----~L~ 231 (269)
T KOG4667|consen 156 RIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNH----KLE 231 (269)
T ss_pred HHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCC----ceE
Confidence 11110 000000 000000 0000000 00011112559999999999 8899999999998763 899
Q ss_pred EeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 292 EFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 292 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
++||+.|.|.... .+.......|.+
T Consensus 232 iIEgADHnyt~~q------~~l~~lgl~f~k 256 (269)
T KOG4667|consen 232 IIEGADHNYTGHQ------SQLVSLGLEFIK 256 (269)
T ss_pred EecCCCcCccchh------hhHhhhcceeEE
Confidence 9999999988543 455555555543
No 94
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.43 E-value=9.7e-12 Score=105.06 Aligned_cols=229 Identities=17% Similarity=0.169 Sum_probs=131.9
Q ss_pred eEEEEE-ccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC------CchHHHHHH
Q 020406 59 LSLRLY-KPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR------LPAAIEDGY 131 (326)
Q Consensus 59 ~~~~~~-~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~------~~~~~~d~~ 131 (326)
+..++| ...+ -.+.|.++++||- .|+... |..+...|+.+.+..|+++|-|..+.++ +....+|+.
T Consensus 38 l~y~~~~~~~~--~~~~Pp~i~lHGl---~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~ 110 (315)
T KOG2382|consen 38 LAYDSVYSSEN--LERAPPAIILHGL---LGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVK 110 (315)
T ss_pred cceeeeecccc--cCCCCceEEeccc---ccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHH
Confidence 455555 3333 3678999999974 566664 8999999999999999999999665544 345667777
Q ss_pred HHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhH-HHHHHHHHHHHhCCCCCCCcceeEEEEec--cccCCcccCC-
Q 020406 132 MAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGG-NIAHNLAVRLKAGSLELAPVRVKGYILLA--PFFGGTVRKK- 207 (326)
Q Consensus 132 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG-~~a~~~a~~~~~~~~~~~~~~i~~~il~~--p~~~~~~~~~- 207 (326)
..+++...... -.++.++|||||| .+++..+.+ .|..+..+|... |.........
T Consensus 111 ~Fi~~v~~~~~-------------~~~~~l~GHsmGG~~~~m~~t~~--------~p~~~~rliv~D~sP~~~~~~~~e~ 169 (315)
T KOG2382|consen 111 LFIDGVGGSTR-------------LDPVVLLGHSMGGVKVAMAETLK--------KPDLIERLIVEDISPGGVGRSYGEY 169 (315)
T ss_pred HHHHHcccccc-------------cCCceecccCcchHHHHHHHHHh--------cCcccceeEEEecCCccCCcccchH
Confidence 77776654311 1689999999999 555555555 667777777653 5211110000
Q ss_pred -------ccccCC-----C--------cccCCHHHHHHHHHhcCC-CCCCCCCCccCCC------------CCCCCCc-c
Q 020406 208 -------SEAEGP-----R--------EAFLNLELIDRFWRLSIP-IGETTDHPLINPF------------GPVSPSL-E 253 (326)
Q Consensus 208 -------~~~~~~-----~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------~~~~~~~-~ 253 (326)
...+.. . ........+..+....+. ........+.-++ ......+ +
T Consensus 170 ~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~ 249 (315)
T KOG2382|consen 170 RELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED 249 (315)
T ss_pred HHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc
Confidence 000000 0 001111222233333332 1111111110000 0000000 0
Q ss_pred cCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 254 AVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 254 ~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
.-...|||+++|.++ ++.++-.++.+.+ ..++++.++++||..+. |.++++++.+.+|+.++
T Consensus 250 ~~~~~pvlfi~g~~S~fv~~~~~~~~~~~f----p~~e~~~ld~aGHwVh~-----E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 250 GPYTGPVLFIKGLQSKFVPDEHYPRMEKIF----PNVEVHELDEAGHWVHL-----EKPEEFIESISEFLEEP 313 (315)
T ss_pred cccccceeEEecCCCCCcChhHHHHHHHhc----cchheeecccCCceeec-----CCHHHHHHHHHHHhccc
Confidence 111349999999999 3333333444443 34799999999995544 46799999999999875
No 95
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.42 E-value=1.5e-12 Score=101.45 Aligned_cols=209 Identities=18% Similarity=0.176 Sum_probs=131.4
Q ss_pred cEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC-----Cc--hHHHHHHHHHHHHHHHhhcCCCC
Q 020406 75 PIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR-----LP--AAIEDGYMAVKWLQAQAVANEPD 147 (326)
Q Consensus 75 p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~-----~~--~~~~d~~~~~~~l~~~~~~~~~~ 147 (326)
-.|+++.|. .|+... .|...+..+.....+.++++|-++.+.+. ++ ....|...+++-++.
T Consensus 43 ~~iLlipGa---lGs~~t-Df~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~a-------- 110 (277)
T KOG2984|consen 43 NYILLIPGA---LGSYKT-DFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEA-------- 110 (277)
T ss_pred ceeEecccc---cccccc-cCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHH--------
Confidence 467888864 444332 36677777777767899999987654433 32 256788888887765
Q ss_pred cccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCccc-------------CCccccCCC
Q 020406 148 TWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVR-------------KKSEAEGPR 214 (326)
Q Consensus 148 ~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~-------------~~~~~~~~~ 214 (326)
++..++.|+|+|-||..|+..|++ .++.+...|...+....... .....+.+.
T Consensus 111 ------Lk~~~fsvlGWSdGgiTalivAak--------~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~ 176 (277)
T KOG2984|consen 111 ------LKLEPFSVLGWSDGGITALIVAAK--------GKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPY 176 (277)
T ss_pred ------hCCCCeeEeeecCCCeEEEEeecc--------ChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchH
Confidence 445899999999999999999998 77888888877654322211 001112222
Q ss_pred cccCCHHHHHHHHHhcCCCC----CCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhh-HHHHHHHHHHCCCcEE
Q 020406 215 EAFLNLELIDRFWRLSIPIG----ETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDR-AEDYAKTLKNFGKKVE 289 (326)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~-~~~~~~~l~~~g~~~~ 289 (326)
...+..+.....|..+.... ....-..+..+.... .+|+||+||+.|+++.. ...+...+ ....+
T Consensus 177 e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~v-------kcPtli~hG~kDp~~~~~hv~fi~~~---~~~a~ 246 (277)
T KOG2984|consen 177 EDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQV-------KCPTLIMHGGKDPFCGDPHVCFIPVL---KSLAK 246 (277)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccc-------cCCeeEeeCCcCCCCCCCCccchhhh---cccce
Confidence 33445555555555443211 011111122222211 34999999999955332 22232232 33458
Q ss_pred EEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 290 YVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 290 l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
+.++|.++|.|.+. .++++...+.+||++.
T Consensus 247 ~~~~peGkHn~hLr-----ya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 247 VEIHPEGKHNFHLR-----YAKEFNKLVLDFLKST 276 (277)
T ss_pred EEEccCCCcceeee-----chHHHHHHHHHHHhcc
Confidence 99999999999874 4689999999999864
No 96
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.41 E-value=6.8e-13 Score=109.24 Aligned_cols=175 Identities=21% Similarity=0.212 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccC
Q 020406 127 IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRK 206 (326)
Q Consensus 127 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~ 206 (326)
++-...+++||+++. .++.++|+|+|.|.||-+|+.+|.+ .+ .|+++|+++|..-.....
T Consensus 3 LEyfe~Ai~~L~~~p-----------~v~~~~Igi~G~SkGaelALllAs~--------~~-~i~avVa~~ps~~~~~~~ 62 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHP-----------EVDPDKIGIIGISKGAELALLLASR--------FP-QISAVVAISPSSVVFQGI 62 (213)
T ss_dssp CHHHHHHHHHHHCST-----------TB--SSEEEEEETHHHHHHHHHHHH--------SS-SEEEEEEES--SB--SSE
T ss_pred hHHHHHHHHHHHhCC-----------CCCCCCEEEEEECHHHHHHHHHHhc--------CC-CccEEEEeCCceeEecch
Confidence 345678999999986 5788999999999999999999999 44 999999999854322211
Q ss_pred CccccC-CCcccCCHHHHHHHHHhcCCCCCCCCCCccCCC----CCCCCCcccCCCCcEEEEEcCcC---cchhhHHHHH
Q 020406 207 KSEAEG-PREAFLNLELIDRFWRLSIPIGETTDHPLINPF----GPVSPSLEAVDLDPILVVVGGSD---LLKDRAEDYA 278 (326)
Q Consensus 207 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~lii~G~~D---~~~~~~~~~~ 278 (326)
...... ...+.+........+ ............... ......-......|+|+++|++| +....++.+.
T Consensus 63 ~~~~~~~~~lp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~ 139 (213)
T PF08840_consen 63 GFYRDSSKPLPYLPFDISKFSW---NEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIE 139 (213)
T ss_dssp EEETTE--EE----B-GGG-EE----TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHH
T ss_pred hcccCCCccCCcCCcChhhcee---cCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHH
Confidence 000000 000111000000000 000000000000000 00000000011449999999999 3345667778
Q ss_pred HHHHHCCCc--EEEEEeCCCceeeeecC-CC----------------------CHHHHHHHHHHHHHhhhc
Q 020406 279 KTLKNFGKK--VEYVEFEGKQHGFFTID-PN----------------------SEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 279 ~~l~~~g~~--~~l~~~~~~~H~~~~~~-~~----------------------~~~~~~~~~~~~~fl~~~ 324 (326)
++|++.+.+ ++++.||++||.+.... |. ....++.+..+++||++|
T Consensus 140 ~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~ 210 (213)
T PF08840_consen 140 ERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKH 210 (213)
T ss_dssp HHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 889888754 79999999999754321 11 024578899999999886
No 97
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.39 E-value=3.2e-12 Score=104.60 Aligned_cols=121 Identities=24% Similarity=0.325 Sum_probs=86.3
Q ss_pred eeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc----
Q 020406 49 KDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP---- 124 (326)
Q Consensus 49 ~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~---- 124 (326)
++|.+++.+ +.+++|+-... ....|++++.||||++.-+ |..++..+..+....|+++|.|+.++....
T Consensus 51 edv~i~~~~-~t~n~Y~t~~~-~t~gpil~l~HG~G~S~LS-----fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~d 123 (343)
T KOG2564|consen 51 EDVSIDGSD-LTFNVYLTLPS-ATEGPILLLLHGGGSSALS-----FAIFASELKSKIRCRCLALDLRGHGETKVENEDD 123 (343)
T ss_pred cccccCCCc-ceEEEEEecCC-CCCccEEEEeecCcccchh-----HHHHHHHHHhhcceeEEEeeccccCccccCChhh
Confidence 455555554 35666653321 3577999999999876555 778899999888899999999998876543
Q ss_pred ----hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec
Q 020406 125 ----AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA 197 (326)
Q Consensus 125 ----~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~ 197 (326)
....|+-+.++++... .+.+|+|+||||||.+|...|... .-+.+.|++.+.
T Consensus 124 lS~eT~~KD~~~~i~~~fge--------------~~~~iilVGHSmGGaIav~~a~~k-------~lpsl~Gl~viD 179 (343)
T KOG2564|consen 124 LSLETMSKDFGAVIKELFGE--------------LPPQIILVGHSMGGAIAVHTAASK-------TLPSLAGLVVID 179 (343)
T ss_pred cCHHHHHHHHHHHHHHHhcc--------------CCCceEEEeccccchhhhhhhhhh-------hchhhhceEEEE
Confidence 3456666666655422 236899999999999999988652 224477777765
No 98
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=5.1e-11 Score=98.81 Aligned_cols=120 Identities=24% Similarity=0.260 Sum_probs=84.1
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeec-CCCC--CC----C----CCchH
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPD-YRLA--PE----N----RLPAA 126 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d-~r~~--~~----~----~~~~~ 126 (326)
...+.+|.|.+.+ +..|+||++||++-...... ...-..++|.+.||.|+.|| |... +. . .....
T Consensus 46 ~r~y~l~vP~g~~-~~apLvv~LHG~~~sgag~~---~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g 121 (312)
T COG3509 46 KRSYRLYVPPGLP-SGAPLVVVLHGSGGSGAGQL---HGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRG 121 (312)
T ss_pred ccceEEEcCCCCC-CCCCEEEEEecCCCChHHhh---cccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCC
Confidence 5788999998863 44499999999754322211 22234789999999999996 3311 11 1 11223
Q ss_pred HHH---HHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 127 IED---GYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 127 ~~d---~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
++| +.+++.-+..+. .+|++||+|.|.|.||.|+..++.. +++.+.++..+++..
T Consensus 122 ~ddVgflr~lva~l~~~~-----------gidp~RVyvtGlS~GG~Ma~~lac~--------~p~~faa~A~VAg~~ 179 (312)
T COG3509 122 VDDVGFLRALVAKLVNEY-----------GIDPARVYVTGLSNGGRMANRLACE--------YPDIFAAIAPVAGLL 179 (312)
T ss_pred ccHHHHHHHHHHHHHHhc-----------CcCcceEEEEeeCcHHHHHHHHHhc--------Ccccccceeeeeccc
Confidence 444 444555555443 6999999999999999999999998 889999988888655
No 99
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.37 E-value=1.4e-11 Score=109.71 Aligned_cols=192 Identities=19% Similarity=0.194 Sum_probs=102.3
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCC--------C---------------------C
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPE--------N---------------------R 122 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~--------~---------------------~ 122 (326)
++.|+|||.||- .|++.. |..++..||++ ||+|+++|+|-... . .
T Consensus 98 ~~~PvvIFSHGl---gg~R~~--yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 98 GKFPVVIFSHGL---GGSRTS--YSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp S-EEEEEEE--T---T--TTT--THHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCCEEEEeCCC---Ccchhh--HHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccc
Confidence 678999999986 455554 88999999998 99999999983210 0 0
Q ss_pred C-------------chHHHHHHHHHHHHHHHhhcCCC--------C-cccccccCCCcEEEeecChhHHHHHHHHHHHHh
Q 020406 123 L-------------PAAIEDGYMAVKWLQAQAVANEP--------D-TWLTEVADFGKVFISGDSAGGNIAHNLAVRLKA 180 (326)
Q Consensus 123 ~-------------~~~~~d~~~~~~~l~~~~~~~~~--------~-~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~ 180 (326)
. .....|+..+++.|.+....... + ..+...+|.++|+++|||.||..|+..+.++
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-- 249 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-- 249 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc--
Confidence 0 01245666677776543321100 0 0133468899999999999999999998873
Q ss_pred CCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcE
Q 020406 181 GSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPI 260 (326)
Q Consensus 181 ~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (326)
.+++++|++.|+....... ....+ ..|+
T Consensus 250 -------~r~~~~I~LD~W~~Pl~~~----------------------------------~~~~i-----------~~P~ 277 (379)
T PF03403_consen 250 -------TRFKAGILLDPWMFPLGDE----------------------------------IYSKI-----------PQPL 277 (379)
T ss_dssp -------TT--EEEEES---TTS-GG----------------------------------GGGG-------------S-E
T ss_pred -------cCcceEEEeCCcccCCCcc----------------------------------cccCC-----------CCCE
Confidence 8899999999987421100 00000 2299
Q ss_pred EEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceee----eecCCC-------------C-HHHHHHHHHHHHHhh
Q 020406 261 LVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGF----FTIDPN-------------S-EDANRLMQIIKHFIA 322 (326)
Q Consensus 261 lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~----~~~~~~-------------~-~~~~~~~~~~~~fl~ 322 (326)
|+|+.+.=. ........+++........+..+.|..|.- .+..|. . ...+...+.+++||+
T Consensus 278 L~InSe~f~-~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~ 356 (379)
T PF03403_consen 278 LFINSESFQ-WWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLR 356 (379)
T ss_dssp EEEEETTT---HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHH
T ss_pred EEEECcccC-ChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHH
Confidence 999887522 222222222233445677899999999941 122221 0 123456677888887
Q ss_pred hc
Q 020406 323 EN 324 (326)
Q Consensus 323 ~~ 324 (326)
+|
T Consensus 357 ~~ 358 (379)
T PF03403_consen 357 RH 358 (379)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 100
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.37 E-value=4.7e-12 Score=99.24 Aligned_cols=218 Identities=18% Similarity=0.191 Sum_probs=128.3
Q ss_pred CeEEEEEccCCCCC-CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCC--C-----CCCC--------
Q 020406 58 DLSLRLYKPALPVS-TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYR--L-----APEN-------- 121 (326)
Q Consensus 58 ~~~~~~~~P~~~~~-~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r--~-----~~~~-------- 121 (326)
..+..+|.|...+. ++.|++.|+-|- ..............+.|+++|++|+.||-. + .+++
T Consensus 27 ~Mtf~vylPp~a~~~k~~P~lf~LSGL---TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAG 103 (283)
T KOG3101|consen 27 SMTFGVYLPPDAPRGKRCPVLFYLSGL---TCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAG 103 (283)
T ss_pred ceEEEEecCCCcccCCcCceEEEecCC---cccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCce
Confidence 47888999977644 458999999964 333222112334567788899999999964 1 1110
Q ss_pred CC----chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec
Q 020406 122 RL----PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA 197 (326)
Q Consensus 122 ~~----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~ 197 (326)
.+ ..-+..-..+++|+.++..++-.. -...+|+.++.|+||||||+-|+..+++ .+.+.+.+-.++
T Consensus 104 FYvnAt~epw~~~yrMYdYv~kELp~~l~~--~~~pld~~k~~IfGHSMGGhGAl~~~Lk--------n~~kykSvSAFA 173 (283)
T KOG3101|consen 104 FYVNATQEPWAKHYRMYDYVVKELPQLLNS--ANVPLDPLKVGIFGHSMGGHGALTIYLK--------NPSKYKSVSAFA 173 (283)
T ss_pred eEEecccchHhhhhhHHHHHHHHHHHHhcc--ccccccchhcceeccccCCCceEEEEEc--------Ccccccceeccc
Confidence 01 122344455777776665543210 0114889999999999999999999998 778999999999
Q ss_pred cccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhh---H
Q 020406 198 PFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDR---A 274 (326)
Q Consensus 198 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~---~ 274 (326)
|+.+............ .++.. ....|+.|... ..++.+... . . -+||-+|+.|.+... .
T Consensus 174 PI~NP~~cpWGqKAf~--gYLG~--~ka~W~~yDat------~lik~y~~~-~------~-~ilIdqG~~D~Fl~~qLlP 235 (283)
T KOG3101|consen 174 PICNPINCPWGQKAFT--GYLGD--NKAQWEAYDAT------HLIKNYRGV-G------D-DILIDQGAADNFLAEQLLP 235 (283)
T ss_pred cccCcccCcchHHHhh--cccCC--ChHHHhhcchH------HHHHhcCCC-C------c-cEEEecCccchhhhhhcCh
Confidence 9987654322111100 00000 11122222110 001111111 1 1 599999999955442 1
Q ss_pred HHHHHHHHHC-CCcEEEEEeCCCceeeeecCCC
Q 020406 275 EDYAKTLKNF-GKKVEYVEFEGKQHGFFTIDPN 306 (326)
Q Consensus 275 ~~~~~~l~~~-g~~~~l~~~~~~~H~~~~~~~~ 306 (326)
+.+.++.+.. ..++.++.-+|-.|.+.+....
T Consensus 236 e~l~~a~~~~~~~~v~~r~~~gyDHSYyfIaTF 268 (283)
T KOG3101|consen 236 ENLLEACKATWQAPVVFRLQEGYDHSYYFIATF 268 (283)
T ss_pred HHHHHHhhccccccEEEEeecCCCcceeeehhh
Confidence 2333333322 2578899999999988765533
No 101
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.37 E-value=1.7e-11 Score=109.83 Aligned_cols=63 Identities=19% Similarity=0.141 Sum_probs=51.2
Q ss_pred CCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCC-CceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 257 LDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEG-KQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 257 ~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
..|+|+++|+.| ++.+.++++++.++..+.+++++++++ .+|.... ++++++.+.+.+||++.
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l-----e~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV-----FDIHLFEKKIYEFLNRK 388 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh-----cCHHHHHHHHHHHHccc
Confidence 459999999999 556678888888887666789999996 8995433 56789999999999764
No 102
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.36 E-value=6e-12 Score=108.84 Aligned_cols=131 Identities=23% Similarity=0.207 Sum_probs=77.7
Q ss_pred ceeeeeEecCCC--CeEEEEEccCCCCCCCCcEEEEEcCCcccc----CCCC--------C-CcchhHHHHHhhcCCcEE
Q 020406 46 VVWKDVVFDPVH--DLSLRLYKPALPVSTKLPIFYYIHGGGFCI----GSRT--------W-PNCQNYCFKLASELQAVI 110 (326)
Q Consensus 46 ~~~~~v~~~~~~--~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~----~~~~--------~-~~~~~~~~~la~~~g~~v 110 (326)
.+.+.+.+.... .+++.+..|.+. +++.|+||.+||-|... |... . ..-..+..+|+.+ ||+|
T Consensus 86 Y~~EKv~f~~~p~~~vpaylLvPd~~-~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~-GYVv 163 (390)
T PF12715_consen 86 YTREKVEFNTTPGSRVPAYLLVPDGA-KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR-GYVV 163 (390)
T ss_dssp EEEEEEEE--STTB-EEEEEEEETT---S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT-TSEE
T ss_pred eEEEEEEEEccCCeeEEEEEEecCCC-CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC-CCEE
Confidence 344555655444 477778899874 58999999999854421 1110 0 0012356777766 9999
Q ss_pred EeecCCCCCCC----------CCc-----------------hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEee
Q 020406 111 ISPDYRLAPEN----------RLP-----------------AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISG 163 (326)
Q Consensus 111 i~~d~r~~~~~----------~~~-----------------~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G 163 (326)
+++|-...++. ++. ...-|...+++||.+.. .+|++||+++|
T Consensus 164 la~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slp-----------eVD~~RIG~~G 232 (390)
T PF12715_consen 164 LAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLP-----------EVDPDRIGCMG 232 (390)
T ss_dssp EEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-T-----------TEEEEEEEEEE
T ss_pred EEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCc-----------ccCccceEEEe
Confidence 99997744321 100 01224455888888876 69999999999
Q ss_pred cChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 164 DSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 164 ~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
+||||..++.+++-+ ++|++.+..+-
T Consensus 233 fSmGg~~a~~LaALD---------dRIka~v~~~~ 258 (390)
T PF12715_consen 233 FSMGGYRAWWLAALD---------DRIKATVANGY 258 (390)
T ss_dssp EGGGHHHHHHHHHH----------TT--EEEEES-
T ss_pred ecccHHHHHHHHHcc---------hhhHhHhhhhh
Confidence 999999999999875 88988887654
No 103
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.36 E-value=2.9e-11 Score=108.82 Aligned_cols=229 Identities=16% Similarity=0.163 Sum_probs=156.5
Q ss_pred EecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC---------
Q 020406 52 VFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR--------- 122 (326)
Q Consensus 52 ~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~--------- 122 (326)
+..+|..|+..+.. ++....+.|++|+-.|| | +-...+.|......+..+ |-..+..+.|+.++..
T Consensus 400 tSkDGT~IPYFiv~-K~~~~d~~pTll~aYGG-F--~vsltP~fs~~~~~WLer-Gg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 400 TSKDGTRIPYFIVR-KGAKKDENPTLLYAYGG-F--NISLTPRFSGSRKLWLER-GGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EcCCCccccEEEEe-cCCcCCCCceEEEeccc-c--ccccCCccchhhHHHHhc-CCeEEEEecccCCccCHHHHHHHhh
Confidence 34444457777776 55322378999999985 4 333344477777555555 8777778999887653
Q ss_pred --CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 123 --LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 123 --~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
-....+|..++.++|.++. ...|+++.|.|.|-||.++..+..+ .|+.+.+++...|++
T Consensus 475 ~nrq~vfdDf~AVaedLi~rg-----------itspe~lgi~GgSNGGLLvg~alTQ--------rPelfgA~v~evPll 535 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKRG-----------ITSPEKLGIQGGSNGGLLVGAALTQ--------RPELFGAAVCEVPLL 535 (648)
T ss_pred hcchhhhHHHHHHHHHHHHhC-----------CCCHHHhhhccCCCCceEEEeeecc--------ChhhhCceeeccchh
Confidence 2345788999999998875 4567999999999999999999888 899999999999999
Q ss_pred CCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCC----CccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhH
Q 020406 201 GGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDH----PLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRA 274 (326)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~ 274 (326)
|+........ ...|..-++....+.. ...||++..... ..=||+||-.|.+| |.+.++
T Consensus 536 DMlRYh~l~a-------------G~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g---~kYP~~LITTs~~DDRVHPaHa 599 (648)
T COG1505 536 DMLRYHLLTA-------------GSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPG---QKYPPTLITTSLHDDRVHPAHA 599 (648)
T ss_pred hhhhhccccc-------------chhhHhhcCCCCCHHHHHHHHhcCchhcCCcc---ccCCCeEEEcccccccccchHH
Confidence 8654322111 1122222222211111 125565554443 22569999999999 888899
Q ss_pred HHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 275 EDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 275 ~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
+.|+.+|++.+.++-+.+--++||+-.-.. .+..+....+..||.+
T Consensus 600 rKfaa~L~e~~~pv~~~e~t~gGH~g~~~~---~~~A~~~a~~~afl~r 645 (648)
T COG1505 600 RKFAAKLQEVGAPVLLREETKGGHGGAAPT---AEIARELADLLAFLLR 645 (648)
T ss_pred HHHHHHHHhcCCceEEEeecCCcccCCCCh---HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999654211 2323444455556543
No 104
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.36 E-value=5.5e-12 Score=108.38 Aligned_cols=126 Identities=22% Similarity=0.267 Sum_probs=86.5
Q ss_pred CCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhH-------HHHHhhcCCcEEEeecCCCCCCCC------
Q 020406 56 VHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNY-------CFKLASELQAVIISPDYRLAPENR------ 122 (326)
Q Consensus 56 ~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~-------~~~la~~~g~~vi~~d~r~~~~~~------ 122 (326)
|..|.+++|.|.....++.|+||..|+.|. +.......... ...++.+ ||+|+..|.|+...+.
T Consensus 2 Gv~L~adv~~P~~~~~~~~P~il~~tpY~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 2 GVRLAADVYRPGADGGGPFPVILTRTPYGK--GDQTASDLAGANPGPPSARRPFAER-GYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp S-EEEEEEEEE--TTSSSEEEEEEEESSTC--TC-HHHHHHTTCHHSHGGGHHHHHT-T-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCEEEEEEEecCCCCCCcccEEEEccCcCC--CCCcccchhhhhcccchhHHHHHhC-CCEEEEECCcccccCCCccccC
Confidence 345888999991123589999999996542 11000000000 0115555 9999999999654432
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC
Q 020406 123 LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 123 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~ 202 (326)
.+...+|..++|+|+.++. ....||+++|.|++|..++.+|.. .++.+++++...+..+.
T Consensus 79 ~~~e~~D~~d~I~W~~~Qp------------ws~G~VGm~G~SY~G~~q~~~A~~--------~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQP------------WSNGKVGMYGISYGGFTQWAAAAR--------RPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCT------------TEEEEEEEEEETHHHHHHHHHHTT--------T-TTEEEEEEESE-SBT
T ss_pred ChhHHHHHHHHHHHHHhCC------------CCCCeEEeeccCHHHHHHHHHHhc--------CCCCceEEEecccCCcc
Confidence 4567899999999999985 333699999999999999999987 77999999999988776
Q ss_pred cc
Q 020406 203 TV 204 (326)
Q Consensus 203 ~~ 204 (326)
..
T Consensus 139 ~~ 140 (272)
T PF02129_consen 139 YR 140 (272)
T ss_dssp CC
T ss_pred cc
Confidence 55
No 105
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.35 E-value=7e-11 Score=118.70 Aligned_cols=126 Identities=13% Similarity=0.011 Sum_probs=76.6
Q ss_pred eeeEecCCCCeEEEEEccCCC-C--CCCCcEEEEEcCCccccCCCCCCcchh-----HHHHHhhcCCcEEEeecCCCCCC
Q 020406 49 KDVVFDPVHDLSLRLYKPALP-V--STKLPIFYYIHGGGFCIGSRTWPNCQN-----YCFKLASELQAVIISPDYRLAPE 120 (326)
Q Consensus 49 ~~v~~~~~~~~~~~~~~P~~~-~--~~~~p~vv~~HGgg~~~~~~~~~~~~~-----~~~~la~~~g~~vi~~d~r~~~~ 120 (326)
.+|.+..+ -+.+.-|.|... . ....|.||++||.+ .+... |.. ++..|..+ ||.|+++|+..+..
T Consensus 40 ~~vv~~~~-~~~l~~y~~~~~~~~~~~~~~plllvhg~~---~~~~~--~d~~~~~s~v~~L~~~-g~~v~~~d~G~~~~ 112 (994)
T PRK07868 40 FQIVESVP-MYRLRRYFPPDNRPGQPPVGPPVLMVHPMM---MSADM--WDVTRDDGAVGILHRA-GLDPWVIDFGSPDK 112 (994)
T ss_pred CcEEEEcC-cEEEEEeCCCCccccccCCCCcEEEECCCC---CCccc--eecCCcccHHHHHHHC-CCEEEEEcCCCCCh
Confidence 55555543 567777877652 1 23558899999642 22222 322 35666666 99999999864322
Q ss_pred C--CCchHH-HHH---HHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEE
Q 020406 121 N--RLPAAI-EDG---YMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYI 194 (326)
Q Consensus 121 ~--~~~~~~-~d~---~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~i 194 (326)
. .....+ +++ .++++.+++. ..++++++||||||.+++.++... .++++++++
T Consensus 113 ~~~~~~~~l~~~i~~l~~~l~~v~~~--------------~~~~v~lvG~s~GG~~a~~~aa~~-------~~~~v~~lv 171 (994)
T PRK07868 113 VEGGMERNLADHVVALSEAIDTVKDV--------------TGRDVHLVGYSQGGMFCYQAAAYR-------RSKDIASIV 171 (994)
T ss_pred hHcCccCCHHHHHHHHHHHHHHHHHh--------------hCCceEEEEEChhHHHHHHHHHhc-------CCCccceEE
Confidence 1 111122 222 3333333322 125899999999999999998751 446899999
Q ss_pred EeccccCC
Q 020406 195 LLAPFFGG 202 (326)
Q Consensus 195 l~~p~~~~ 202 (326)
++++.++.
T Consensus 172 l~~~~~d~ 179 (994)
T PRK07868 172 TFGSPVDT 179 (994)
T ss_pred EEeccccc
Confidence 87766543
No 106
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.34 E-value=1.1e-10 Score=92.27 Aligned_cols=178 Identities=20% Similarity=0.204 Sum_probs=118.8
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC--------------------CCC-CCchHHHHHHH
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLA--------------------PEN-RLPAAIEDGYM 132 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~--------------------~~~-~~~~~~~d~~~ 132 (326)
..+|||+||-|-... .+.+++.++--+ ++.-+.|.-+.- +.. .-...+..+.+
T Consensus 3 ~atIi~LHglGDsg~-----~~~~~~~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~ 76 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-----GWAQFLKQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAAD 76 (206)
T ss_pred eEEEEEEecCCCCCc-----cHHHHHHcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHH
Confidence 458999998643221 155566664433 444444432100 000 01123445666
Q ss_pred HHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccC
Q 020406 133 AVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEG 212 (326)
Q Consensus 133 ~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~ 212 (326)
.+.++.++....+ ++++||++.|+|+||.+|+.++.. .+..+.+++..+++..........
T Consensus 77 ~i~~Li~~e~~~G--------i~~~rI~igGfs~G~a~aL~~~~~--------~~~~l~G~~~~s~~~p~~~~~~~~--- 137 (206)
T KOG2112|consen 77 NIANLIDNEPANG--------IPSNRIGIGGFSQGGALALYSALT--------YPKALGGIFALSGFLPRASIGLPG--- 137 (206)
T ss_pred HHHHHHHHHHHcC--------CCccceeEcccCchHHHHHHHHhc--------cccccceeeccccccccchhhccC---
Confidence 7777777766644 888999999999999999999988 678888888888766322110000
Q ss_pred CCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEE
Q 020406 213 PREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEY 290 (326)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l 290 (326)
. ..... ..|++..||+.| ++..-++..++.++..+..+++
T Consensus 138 -----------------~---------~~~~~------------~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f 179 (206)
T KOG2112|consen 138 -----------------W---------LPGVN------------YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTF 179 (206)
T ss_pred -----------------C---------ccccC------------cchhheecccCCceeehHHHHHHHHHHHHcCCceee
Confidence 0 00000 239999999999 6677788899999999988999
Q ss_pred EEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 291 VEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 291 ~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
+.|+|.+|... .+-++++..|+++
T Consensus 180 ~~y~g~~h~~~---------~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 180 KPYPGLGHSTS---------PQELDDLKSWIKT 203 (206)
T ss_pred eecCCcccccc---------HHHHHHHHHHHHH
Confidence 99999999543 4567888888865
No 107
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.34 E-value=2.9e-11 Score=96.73 Aligned_cols=129 Identities=18% Similarity=0.200 Sum_probs=69.5
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCC
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGET 236 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (326)
+.+.|+|.|+||+.|..++.+ -.+++ |+++|.+.................. .....
T Consensus 59 ~~~~liGSSlGG~~A~~La~~----------~~~~a-vLiNPav~p~~~l~~~iG~~~~~~~-------------~e~~~ 114 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAER----------YGLPA-VLINPAVRPYELLQDYIGEQTNPYT-------------GESYE 114 (187)
T ss_pred CCeEEEEEChHHHHHHHHHHH----------hCCCE-EEEcCCCCHHHHHHHhhCccccCCC-------------Cccce
Confidence 569999999999999999988 33444 8999988654321111100000000 00000
Q ss_pred CCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHH
Q 020406 237 TDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQI 316 (326)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~ 316 (326)
-.......+..... .......++++++++.|...+.. +..++.+. +...+.+|++|.|. ..++.+..
T Consensus 115 ~~~~~~~~l~~l~~-~~~~~~~~~lvll~~~DEvLd~~-~a~~~~~~----~~~~i~~ggdH~f~-------~f~~~l~~ 181 (187)
T PF05728_consen 115 LTEEHIEELKALEV-PYPTNPERYLVLLQTGDEVLDYR-EAVAKYRG----CAQIIEEGGDHSFQ-------DFEEYLPQ 181 (187)
T ss_pred echHhhhhcceEec-cccCCCccEEEEEecCCcccCHH-HHHHHhcC----ceEEEEeCCCCCCc-------cHHHHHHH
Confidence 00000000000000 00001228999999999555442 23333332 35567788899886 35688888
Q ss_pred HHHHhh
Q 020406 317 IKHFIA 322 (326)
Q Consensus 317 ~~~fl~ 322 (326)
+.+|+.
T Consensus 182 i~~f~~ 187 (187)
T PF05728_consen 182 IIAFLQ 187 (187)
T ss_pred HHHhhC
Confidence 888873
No 108
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.33 E-value=4.6e-12 Score=107.62 Aligned_cols=124 Identities=22% Similarity=0.251 Sum_probs=80.4
Q ss_pred CCeEEEEEccCC-CCCCCCcEEEEEcC-CccccCCCCCCcchhHHHHHhhcCC---cEEEeecCCCCC------------
Q 020406 57 HDLSLRLYKPAL-PVSTKLPIFYYIHG-GGFCIGSRTWPNCQNYCFKLASELQ---AVIISPDYRLAP------------ 119 (326)
Q Consensus 57 ~~~~~~~~~P~~-~~~~~~p~vv~~HG-gg~~~~~~~~~~~~~~~~~la~~~g---~~vi~~d~r~~~------------ 119 (326)
....+.||.|.+ ...++.|+|+++|| ++|..... ....+.++..+.+ .+++.++.....
T Consensus 6 ~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~----~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~ 81 (251)
T PF00756_consen 6 RDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGN----AQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGS 81 (251)
T ss_dssp EEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHH----HHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCT
T ss_pred CeEEEEEEECCCCCCCCCCEEEEEccCCccccccch----HHHHHHHHHHhCCCCceEEEEEeccccccccccccccccc
Confidence 357889999988 35678899999998 44432111 2234444555421 455555543221
Q ss_pred -----CCCCchHHHH-H-HHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeE
Q 020406 120 -----ENRLPAAIED-G-YMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKG 192 (326)
Q Consensus 120 -----~~~~~~~~~d-~-~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~ 192 (326)
.........+ + .+++.++.++. .+++++.+|+|+||||..|+.++.+ +|+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~l~~el~p~i~~~~-----------~~~~~~~~i~G~S~GG~~Al~~~l~--------~Pd~F~~ 142 (251)
T PF00756_consen 82 SRRADDSGGGDAYETFLTEELIPYIEANY-----------RTDPDRRAIAGHSMGGYGALYLALR--------HPDLFGA 142 (251)
T ss_dssp TCBCTSTTTHHHHHHHHHTHHHHHHHHHS-----------SEEECCEEEEEETHHHHHHHHHHHH--------STTTESE
T ss_pred ccccccCCCCcccceehhccchhHHHHhc-----------ccccceeEEeccCCCcHHHHHHHHh--------Ccccccc
Confidence 0011112222 2 24666777765 4555569999999999999999999 9999999
Q ss_pred EEEeccccCCc
Q 020406 193 YILLAPFFGGT 203 (326)
Q Consensus 193 ~il~~p~~~~~ 203 (326)
++++||.++..
T Consensus 143 ~~~~S~~~~~~ 153 (251)
T PF00756_consen 143 VIAFSGALDPS 153 (251)
T ss_dssp EEEESEESETT
T ss_pred ccccCcccccc
Confidence 99999986554
No 109
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.33 E-value=1.9e-11 Score=97.12 Aligned_cols=161 Identities=20% Similarity=0.271 Sum_probs=116.2
Q ss_pred chhHHHHHhhcCCcEEEeecCC-C---CCC------------CCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCc
Q 020406 95 CQNYCFKLASELQAVIISPDYR-L---APE------------NRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGK 158 (326)
Q Consensus 95 ~~~~~~~la~~~g~~vi~~d~r-~---~~~------------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~ 158 (326)
....+..++.. ||.|+.||+- + +++ ...+....|+..+++||+.+ .+..+
T Consensus 56 ~r~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~-------------g~~kk 121 (242)
T KOG3043|consen 56 TREGADKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH-------------GDSKK 121 (242)
T ss_pred HHHHHHHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc-------------CCcce
Confidence 44567777776 9999999964 3 222 12345678999999999965 44589
Q ss_pred EEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCC
Q 020406 159 VFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTD 238 (326)
Q Consensus 159 i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (326)
|+++|+++||.++..+... . ..+.++++++|.+.... ...
T Consensus 122 IGv~GfCwGak~vv~~~~~--------~-~~f~a~v~~hps~~d~~-----------------D~~-------------- 161 (242)
T KOG3043|consen 122 IGVVGFCWGAKVVVTLSAK--------D-PEFDAGVSFHPSFVDSA-----------------DIA-------------- 161 (242)
T ss_pred eeEEEEeecceEEEEeecc--------c-hhheeeeEecCCcCChh-----------------HHh--------------
Confidence 9999999999999988876 2 28999999998652111 000
Q ss_pred CCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCC-CcEEEEEeCCCceeeee--cCCC----CHH
Q 020406 239 HPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFG-KKVEYVEFEGKQHGFFT--IDPN----SED 309 (326)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g-~~~~l~~~~~~~H~~~~--~~~~----~~~ 309 (326)
. ...|++++.|+.| ++.....++-+++++.. ..+++++|+|.+|+|.. .+.. ...
T Consensus 162 -----~-----------vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~ 225 (242)
T KOG3043|consen 162 -----N-----------VKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKA 225 (242)
T ss_pred -----c-----------CCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHH
Confidence 0 0349999999999 44656666777777654 34689999999999985 2222 234
Q ss_pred HHHHHHHHHHHhhhcC
Q 020406 310 ANRLMQIIKHFIAENS 325 (326)
Q Consensus 310 ~~~~~~~~~~fl~~~~ 325 (326)
.++.+..+++|++++.
T Consensus 226 ~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 226 AEEAYQRFISWFKHYL 241 (242)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 6788999999998763
No 110
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.30 E-value=4.4e-11 Score=112.99 Aligned_cols=174 Identities=24% Similarity=0.298 Sum_probs=118.4
Q ss_pred ceeecccccEEEee-----CCcEEecCCCCCCCCC-------CCCCCceeeee---------------------EecCCC
Q 020406 11 SLVDECRGVLFVYS-----DGSIVRLPKPSFSVPV-------HDDGSVVWKDV---------------------VFDPVH 57 (326)
Q Consensus 11 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~p~-------~~~~~~~~~~v---------------------~~~~~~ 57 (326)
.++.+..|.+.... +..+..+.+.|++.|+ +++..-.+..+ ...+.|
T Consensus 16 ~~~~t~~G~i~G~~~~~~~~~~~~~F~gIpya~PP~G~lRF~~P~p~~~W~gv~~at~~~~~C~q~~~~~~~~~~~~sED 95 (545)
T KOG1516|consen 16 PVVGTPYGKIRGKTVSSTYDVDVDRFLGIPYAKPPVGELRFRKPQPPEPWTGVLDATKYGPACPQNDELTGQNRVFGSED 95 (545)
T ss_pred ceEecccceEeeeEeeccCCceeEEEcccccCCCCCccccCCCCCCCCCCccccccccCCCCCCCccccccccCCCCcCC
Confidence 46677777766443 3457789999888776 11111111111 123567
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCC---------CCCchHHH
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPE---------NRLPAAIE 128 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~---------~~~~~~~~ 128 (326)
++.+++|.|......+.||+||+|||||..++.... .......++....++|+.+.||++.- .+....+.
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~-~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~ 174 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSF-EIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLF 174 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccch-hhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHH
Confidence 899999999875211289999999999988885431 01122334444479999999996522 12345788
Q ss_pred HHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 129 DGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 129 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
|...+++|++++...+| .|+++|.|+|||+||..+..+...- . ....+..+|..++.
T Consensus 175 Dq~~AL~wv~~~I~~FG--------Gdp~~vTl~G~saGa~~v~~l~~Sp--~----s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFG--------GDPKNVTLFGHSAGAASVSLLTLSP--H----SRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHHhcC--------CCCCeEEEEeechhHHHHHHHhcCH--h----hHHHHHHHHhhccc
Confidence 99999999999999876 8889999999999999998887540 0 12556666666654
No 111
>PRK05855 short chain dehydrogenase; Validated
Probab=99.30 E-value=2.3e-11 Score=115.87 Aligned_cols=86 Identities=13% Similarity=0.067 Sum_probs=53.3
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc-----hHHHHHHHHHHHHHHHhhcCCCC
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP-----AAIEDGYMAVKWLQAQAVANEPD 147 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~-----~~~~d~~~~~~~l~~~~~~~~~~ 147 (326)
+.|+|||+||.+ ++... |..+...| .+ +|.|+++|+|+.+.+..+ ..+++..+.+..+.+...
T Consensus 24 ~~~~ivllHG~~---~~~~~--w~~~~~~L-~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~----- 91 (582)
T PRK05855 24 DRPTVVLVHGYP---DNHEV--WDGVAPLL-AD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVS----- 91 (582)
T ss_pred CCCeEEEEcCCC---chHHH--HHHHHHHh-hc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhC-----
Confidence 468999999753 22222 66666666 44 799999999987654321 123333332222222210
Q ss_pred cccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 148 TWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 148 ~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
. ..+++|+||||||.+++.++.+
T Consensus 92 ------~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 92 ------P-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ------C-CCcEEEEecChHHHHHHHHHhC
Confidence 1 1349999999999999887754
No 112
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.30 E-value=1.6e-11 Score=99.79 Aligned_cols=128 Identities=20% Similarity=0.352 Sum_probs=96.2
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHH
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWL 137 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l 137 (326)
..++.|+.|... +..|+|+|+|| |...+.. |...+..+++. ||+|++|+.-..-.......+++...+++|+
T Consensus 32 PkpLlI~tP~~~--G~yPVilF~HG--~~l~ns~---Ys~lL~HIASH-GfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL 103 (307)
T PF07224_consen 32 PKPLLIVTPSEA--GTYPVILFLHG--FNLYNSF---YSQLLAHIASH-GFIVVAPQLYTLFPPDGQDEIKSAASVINWL 103 (307)
T ss_pred CCCeEEecCCcC--CCccEEEEeec--hhhhhHH---HHHHHHHHhhc-CeEEEechhhcccCCCchHHHHHHHHHHHHH
Confidence 478889999865 89999999994 5444433 77778888776 9999999965432234556788899999999
Q ss_pred HHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC
Q 020406 138 QAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 138 ~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~ 202 (326)
.+....+.... -..+.++++++|||.||..|..+|+.. . ....+.++|.+.|+-..
T Consensus 104 ~~gL~~~Lp~~---V~~nl~klal~GHSrGGktAFAlALg~--a----~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 104 PEGLQHVLPEN---VEANLSKLALSGHSRGGKTAFALALGY--A----TSLKFSALIGIDPVAGT 159 (307)
T ss_pred HhhhhhhCCCC---cccccceEEEeecCCccHHHHHHHhcc--c----ccCchhheecccccCCC
Confidence 88765432211 136779999999999999999999861 1 23578899999997643
No 113
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.29 E-value=3.7e-10 Score=104.30 Aligned_cols=130 Identities=15% Similarity=0.136 Sum_probs=83.6
Q ss_pred eeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCC--CCcchhHHHHHhhcCCcEEEeecCCCCCCCCC---
Q 020406 49 KDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRT--WPNCQNYCFKLASELQAVIISPDYRLAPENRL--- 123 (326)
Q Consensus 49 ~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~--~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~--- 123 (326)
.+|.+.+. -+.+.-|.|... ....+.||++|| ++....- ......++..|+++ ||.|+.+|+|..+....
T Consensus 165 g~VV~~~~-~~eLi~Y~P~t~-~~~~~PlLiVp~--~i~k~yilDL~p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~~ 239 (532)
T TIGR01838 165 GAVVFENE-LFQLIQYEPTTE-TVHKTPLLIVPP--WINKYYILDLRPQNSLVRWLVEQ-GHTVFVISWRNPDASQADKT 239 (532)
T ss_pred CeEEEECC-cEEEEEeCCCCC-cCCCCcEEEECc--ccccceeeecccchHHHHHHHHC-CcEEEEEECCCCCcccccCC
Confidence 45555543 467777777753 234567899996 3322211 00123677888777 99999999997543321
Q ss_pred -chH-HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHH----HHHHHHhCCCCCCCcceeEEEEec
Q 020406 124 -PAA-IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHN----LAVRLKAGSLELAPVRVKGYILLA 197 (326)
Q Consensus 124 -~~~-~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~----~a~~~~~~~~~~~~~~i~~~il~~ 197 (326)
... .+++.++++.+.+.. +.++++++|||+||.+++. ++.. ..+++++++++++
T Consensus 240 ~ddY~~~~i~~al~~v~~~~-------------g~~kv~lvG~cmGGtl~a~ala~~aa~-------~~~~rv~slvll~ 299 (532)
T TIGR01838 240 FDDYIRDGVIAALEVVEAIT-------------GEKQVNCVGYCIGGTLLSTALAYLAAR-------GDDKRIKSATFFT 299 (532)
T ss_pred hhhhHHHHHHHHHHHHHHhc-------------CCCCeEEEEECcCcHHHHHHHHHHHHh-------CCCCccceEEEEe
Confidence 222 234667777777653 3479999999999998643 3333 0256899999998
Q ss_pred cccCCc
Q 020406 198 PFFGGT 203 (326)
Q Consensus 198 p~~~~~ 203 (326)
..++..
T Consensus 300 t~~Df~ 305 (532)
T TIGR01838 300 TLLDFS 305 (532)
T ss_pred cCcCCC
Confidence 877654
No 114
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.26 E-value=5.8e-11 Score=101.77 Aligned_cols=107 Identities=17% Similarity=0.130 Sum_probs=74.9
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchh-HHHHHhhcCCcEEEeecCCCCCCCCCchH-------HHHHHHHHHHHHHHhhc
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQN-YCFKLASELQAVIISPDYRLAPENRLPAA-------IEDGYMAVKWLQAQAVA 143 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~-~~~~la~~~g~~vi~~d~r~~~~~~~~~~-------~~d~~~~~~~l~~~~~~ 143 (326)
...|++|++|| |....... |.. +...+..+.++.|+.+|++......++.. .+++...++++.+..
T Consensus 34 ~~~p~vilIHG--~~~~~~~~--~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~-- 107 (275)
T cd00707 34 PSRPTRFIIHG--WTSSGEES--WISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNT-- 107 (275)
T ss_pred CCCCcEEEEcC--CCCCCCCc--HHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhc--
Confidence 46789999996 43222121 333 34445555589999999987644444332 245556666666543
Q ss_pred CCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 144 NEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 144 ~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
.++.++++++|||+||++|..++.+ .+.+++++++++|..-
T Consensus 108 ---------g~~~~~i~lIGhSlGa~vAg~~a~~--------~~~~v~~iv~LDPa~p 148 (275)
T cd00707 108 ---------GLSLENVHLIGHSLGAHVAGFAGKR--------LNGKLGRITGLDPAGP 148 (275)
T ss_pred ---------CCChHHEEEEEecHHHHHHHHHHHH--------hcCccceeEEecCCcc
Confidence 2566899999999999999999988 6678999999998653
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.24 E-value=2e-09 Score=80.97 Aligned_cols=183 Identities=18% Similarity=0.240 Sum_probs=106.8
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC-----CCC---CCchHHHHH-HHHHHHHHHHhhc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLA-----PEN---RLPAAIEDG-YMAVKWLQAQAVA 143 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~-----~~~---~~~~~~~d~-~~~~~~l~~~~~~ 143 (326)
.--+||+-||.|-...+.. ....+..|+.+ |+.|..+++... ... +-...++++ ..++..+...
T Consensus 13 ~~~tilLaHGAGasmdSt~---m~~~a~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~--- 85 (213)
T COG3571 13 APVTILLAHGAGASMDSTS---MTAVAAALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG--- 85 (213)
T ss_pred CCEEEEEecCCCCCCCCHH---HHHHHHHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc---
Confidence 3358899999765444432 45566667666 999999987521 110 111233333 2233344433
Q ss_pred CCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec-cccCCcccCCccccCCCcccCCHHH
Q 020406 144 NEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA-PFFGGTVRKKSEAEGPREAFLNLEL 222 (326)
Q Consensus 144 ~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~-p~~~~~~~~~~~~~~~~~~~~~~~~ 222 (326)
.+..++++.|+||||-++.+++.. -...|.+++.+. |+.-......
T Consensus 86 ----------l~~gpLi~GGkSmGGR~aSmvade--------~~A~i~~L~clgYPfhppGKPe~--------------- 132 (213)
T COG3571 86 ----------LAEGPLIIGGKSMGGRVASMVADE--------LQAPIDGLVCLGYPFHPPGKPEQ--------------- 132 (213)
T ss_pred ----------ccCCceeeccccccchHHHHHHHh--------hcCCcceEEEecCccCCCCCccc---------------
Confidence 444689999999999999999876 223488887664 5542211100
Q ss_pred HHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeee
Q 020406 223 IDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFT 302 (326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~ 302 (326)
... .+.... ..|++|.||++|.+-...+ .+... ...+.++++++++.|..-.
T Consensus 133 -----------------~Rt---~HL~gl-----~tPtli~qGtrD~fGtr~~-Va~y~--ls~~iev~wl~~adHDLkp 184 (213)
T COG3571 133 -----------------LRT---EHLTGL-----KTPTLITQGTRDEFGTRDE-VAGYA--LSDPIEVVWLEDADHDLKP 184 (213)
T ss_pred -----------------chh---hhccCC-----CCCeEEeecccccccCHHH-HHhhh--cCCceEEEEeccCcccccc
Confidence 000 000111 3499999999996643222 23322 2357899999999996554
Q ss_pred cCC-----CCHHHHHHHHHHHHHhhh
Q 020406 303 IDP-----NSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 303 ~~~-----~~~~~~~~~~~~~~fl~~ 323 (326)
... ..++.....+.+..|++.
T Consensus 185 ~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 185 RKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred ccccccccHHHHHHHHHHHHHHHHhh
Confidence 331 113445566677777764
No 116
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.23 E-value=7.2e-11 Score=99.78 Aligned_cols=118 Identities=16% Similarity=0.056 Sum_probs=70.0
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCC----CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYR----LAPENRLPAAIEDGYMAVKWLQAQAVANEPDT 148 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r----~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~ 148 (326)
+..+||||-|-+ .|-... .|...+...+...+|.|+.+-.+ +.+.......++|+..+++||+.....
T Consensus 32 ~~~~llfIGGLt--DGl~tv-pY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g----- 103 (303)
T PF08538_consen 32 APNALLFIGGLT--DGLLTV-PYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGG----- 103 (303)
T ss_dssp SSSEEEEE--TT----TT-S-TCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS-------
T ss_pred CCcEEEEECCCC--CCCCCC-chHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhcc-----
Confidence 556899998642 222222 13333333345559999988766 455566778899999999999988421
Q ss_pred ccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCccc
Q 020406 149 WLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVR 205 (326)
Q Consensus 149 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~ 205 (326)
....++|+|+|||-|-.-++.++.+. ........|+|+|+.+|+.|....
T Consensus 104 ----~~~~~kIVLmGHSTGcQdvl~Yl~~~---~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 104 ----HFGREKIVLMGHSTGCQDVLHYLSSP---NPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp --------S-EEEEEECCHHHHHHHHHHH----TT---CCCEEEEEEEEE---TTST
T ss_pred ----ccCCccEEEEecCCCcHHHHHHHhcc---CccccccceEEEEEeCCCCChhHh
Confidence 12348999999999999999999882 211124789999999999876654
No 117
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=99.21 E-value=1.3e-10 Score=102.23 Aligned_cols=176 Identities=21% Similarity=0.284 Sum_probs=122.7
Q ss_pred ceeecccccEE----EeeCCcEEecCCCCCCCCCCCCC-------Cceeeee----------------------------
Q 020406 11 SLVDECRGVLF----VYSDGSIVRLPKPSFSVPVHDDG-------SVVWKDV---------------------------- 51 (326)
Q Consensus 11 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~-------~~~~~~v---------------------------- 51 (326)
.||.+-.|.++ ....+.|..+++.|++.|+--+. .-....+
T Consensus 32 ~vv~t~~G~vRG~~~t~~g~~V~aFlGIPfAePPvg~~RFkkP~p~~pW~g~ldAtt~a~~C~Q~~D~yfp~F~GsEMWN 111 (601)
T KOG4389|consen 32 LVVQTKLGTVRGTELTFPGKPVSAFLGIPFAEPPVGDLRFKKPEPKQPWSGVLDATTLANTCYQTRDTYFPGFWGSEMWN 111 (601)
T ss_pred eEEeccCCcccceEEecCCceEEEEecCccCCCCCccccCCCCCcCCCccceecccccchhhhccccccCCCCCcccccC
Confidence 46666666555 34467899999999999971111 1111111
Q ss_pred --EecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC----------C
Q 020406 52 --VFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLA----------P 119 (326)
Q Consensus 52 --~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~----------~ 119 (326)
+-=+.|++.+++|.|.. ...+.-++|++.||||..|+....-|.. ..|+.....+|+.++||.+ +
T Consensus 112 pNt~lSEDCLYlNVW~P~~-~p~n~tVlVWiyGGGF~sGt~SLdvYdG--k~la~~envIvVs~NYRvG~FGFL~l~~~~ 188 (601)
T KOG4389|consen 112 PNTELSEDCLYLNVWAPAA-DPYNLTVLVWIYGGGFYSGTPSLDVYDG--KFLAAVENVIVVSMNYRVGAFGFLYLPGHP 188 (601)
T ss_pred CCCCcChhceEEEEeccCC-CCCCceEEEEEEcCccccCCcceeeecc--ceeeeeccEEEEEeeeeeccceEEecCCCC
Confidence 00145679999999952 2345569999999999999987633433 5567776899999999954 3
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 120 ENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 120 ~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
+.+..-.+-|..-+++|++++...+| .|+++|.|+|.|+|+.-+..-+.. .. ....++.+|+.|+.
T Consensus 189 eaPGNmGl~DQqLAl~WV~~Ni~aFG--------Gnp~~vTLFGESAGaASv~aHLls----P~--S~glF~raIlQSGS 254 (601)
T KOG4389|consen 189 EAPGNMGLLDQQLALQWVQENIAAFG--------GNPSRVTLFGESAGAASVVAHLLS----PG--SRGLFHRAILQSGS 254 (601)
T ss_pred CCCCccchHHHHHHHHHHHHhHHHhC--------CCcceEEEeccccchhhhhheecC----CC--chhhHHHHHhhcCC
Confidence 34445578899999999999999876 888999999999998755443322 11 22567888888876
Q ss_pred cCCc
Q 020406 200 FGGT 203 (326)
Q Consensus 200 ~~~~ 203 (326)
++..
T Consensus 255 ~~~p 258 (601)
T KOG4389|consen 255 LNNP 258 (601)
T ss_pred CCCC
Confidence 6543
No 118
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.21 E-value=1e-09 Score=91.37 Aligned_cols=193 Identities=20% Similarity=0.253 Sum_probs=125.4
Q ss_pred CCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCC------------CCC----------------
Q 020406 71 STKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAP------------ENR---------------- 122 (326)
Q Consensus 71 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~------------~~~---------------- 122 (326)
+.+.|+|||.||- .|++.. |..++..||+. ||+|.++++|-.. +..
T Consensus 115 ~~k~PvvvFSHGL---ggsRt~--YSa~c~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ek 188 (399)
T KOG3847|consen 115 NDKYPVVVFSHGL---GGSRTL--YSAYCTSLASH-GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEK 188 (399)
T ss_pred CCCccEEEEeccc---ccchhh--HHHHhhhHhhC-ceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCce
Confidence 5789999999985 455554 88999999987 9999999999221 000
Q ss_pred --------CchHHHHHHHHHHHHHHHhhcCCCCc----------ccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCC
Q 020406 123 --------LPAAIEDGYMAVKWLQAQAVANEPDT----------WLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLE 184 (326)
Q Consensus 123 --------~~~~~~d~~~~~~~l~~~~~~~~~~~----------~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~ 184 (326)
.-....+|..+++-+.+....-..+. .++.++|.+++.|+|||.||..++.....+
T Consensus 189 ef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~------ 262 (399)
T KOG3847|consen 189 EFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH------ 262 (399)
T ss_pred eEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc------
Confidence 01245677777777765432211111 133468889999999999999988876542
Q ss_pred CCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEE
Q 020406 185 LAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVV 264 (326)
Q Consensus 185 ~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~ 264 (326)
..+++.|++..+........ .+ .. .-|+++|.
T Consensus 263 ---t~FrcaI~lD~WM~Pl~~~~----------------------------------~~----~a-------rqP~~fin 294 (399)
T KOG3847|consen 263 ---TDFRCAIALDAWMFPLDQLQ----------------------------------YS----QA-------RQPTLFIN 294 (399)
T ss_pred ---cceeeeeeeeeeecccchhh----------------------------------hh----hc-------cCCeEEEE
Confidence 78999999998763221100 00 00 12999998
Q ss_pred cCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeee----ecCCC--------------CHHHHHHHHHHHHHhhhc
Q 020406 265 GGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFF----TIDPN--------------SEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 265 G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~----~~~~~--------------~~~~~~~~~~~~~fl~~~ 324 (326)
..|--...+...-+++...+..-.+.++.|+-|.-. +..|+ .+..+..++..+.||++|
T Consensus 295 -v~~fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h 371 (399)
T KOG3847|consen 295 -VEDFQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKH 371 (399)
T ss_pred -cccccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhh
Confidence 344334455556666666555568999999999422 11110 133456778888999876
No 119
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.19 E-value=5.8e-10 Score=101.17 Aligned_cols=220 Identities=17% Similarity=0.138 Sum_probs=138.2
Q ss_pred eeeEecCCC--CeEEEEEccCCC-CCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC--
Q 020406 49 KDVVFDPVH--DLSLRLYKPALP-VSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL-- 123 (326)
Q Consensus 49 ~~v~~~~~~--~~~~~~~~P~~~-~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~-- 123 (326)
+.+.+++.| .+++.|.+-+.. ..++.|++|+.|||-.+.-.. .|..-..-|.. .|++....|-|++++...
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p---~f~~srl~lld-~G~Vla~a~VRGGGe~G~~W 517 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDP---SFRASRLSLLD-RGWVLAYANVRGGGEYGEQW 517 (712)
T ss_pred EEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeecc---ccccceeEEEe-cceEEEEEeeccCcccccch
Confidence 334444444 477887764432 457899999999963222222 24443333444 598888889998776432
Q ss_pred ---------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEE
Q 020406 124 ---------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYI 194 (326)
Q Consensus 124 ---------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~i 194 (326)
...++|.....++|.++. -..+++..+.|.|.||.++..+.-+ .|+.+.++|
T Consensus 518 Hk~G~lakKqN~f~Dfia~AeyLve~g-----------yt~~~kL~i~G~SaGGlLvga~iN~--------rPdLF~avi 578 (712)
T KOG2237|consen 518 HKDGRLAKKQNSFDDFIACAEYLVENG-----------YTQPSKLAIEGGSAGGLLVGACINQ--------RPDLFGAVI 578 (712)
T ss_pred hhccchhhhcccHHHHHHHHHHHHHcC-----------CCCccceeEecccCccchhHHHhcc--------CchHhhhhh
Confidence 246889999999998876 4778999999999999999998876 899999999
Q ss_pred EeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchh
Q 020406 195 LLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKD 272 (326)
Q Consensus 195 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~ 272 (326)
+--|+.|........ ++.....+ ++.+-........-.++|+...........=|-+||..+.+| +.+-
T Consensus 579 a~VpfmDvL~t~~~t-------ilplt~sd--~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~ 649 (712)
T KOG2237|consen 579 AKVPFMDVLNTHKDT-------ILPLTTSD--YEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPL 649 (712)
T ss_pred hcCcceehhhhhccC-------ccccchhh--hcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCccccc
Confidence 999999865442211 11111000 011100000111111333322222111112457999999998 6666
Q ss_pred hHHHHHHHHHHCC-------CcEEEEEeCCCceee
Q 020406 273 RAEDYAKTLKNFG-------KKVEYVEFEGKQHGF 300 (326)
Q Consensus 273 ~~~~~~~~l~~~g-------~~~~l~~~~~~~H~~ 300 (326)
++..+..+|+..- .++-+.+..++||+-
T Consensus 650 ~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~ 684 (712)
T KOG2237|consen 650 ESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGA 684 (712)
T ss_pred chHHHHHHHHHHhhcchhcCCCEEEEEecCCcccc
Confidence 7777777777431 457899999999943
No 120
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.18 E-value=2.2e-09 Score=98.13 Aligned_cols=217 Identities=17% Similarity=0.141 Sum_probs=137.9
Q ss_pred CCceeeeeEecCCC--CeEEEEEccCC-CCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCC
Q 020406 44 GSVVWKDVVFDPVH--DLSLRLYKPAL-PVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPE 120 (326)
Q Consensus 44 ~~~~~~~v~~~~~~--~~~~~~~~P~~-~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~ 120 (326)
.....+.+-.+..+ .+++.+++-.. .-+++.|++|+..|. -|....+.+....-.|..+ |++-...--|++++
T Consensus 415 ~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGa---YG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGge 490 (682)
T COG1770 415 EDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGA---YGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGE 490 (682)
T ss_pred hHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEecc---ccccCCcCcccceeeeecC-ceEEEEEEeecccc
Confidence 44455555444333 47777666544 245788999999985 3333333355555566666 87766666676654
Q ss_pred CC-----------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcc
Q 020406 121 NR-----------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVR 189 (326)
Q Consensus 121 ~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~ 189 (326)
.. -.....|..++.++|.++. ..++++|+++|.|+||++....+-. .|+.
T Consensus 491 lG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g-----------~~~~~~i~a~GGSAGGmLmGav~N~--------~P~l 551 (682)
T COG1770 491 LGRAWYEDGKLLNKKNTFTDFIAAARHLVKEG-----------YTSPDRIVAIGGSAGGMLMGAVANM--------APDL 551 (682)
T ss_pred cChHHHHhhhhhhccccHHHHHHHHHHHHHcC-----------cCCccceEEeccCchhHHHHHHHhh--------Chhh
Confidence 32 1246788889999998876 4777999999999999999999877 8899
Q ss_pred eeEEEEeccccCCcccCCcccc--------CCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEE
Q 020406 190 VKGYILLAPFFGGTVRKKSEAE--------GPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPIL 261 (326)
Q Consensus 190 i~~~il~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (326)
++++|+.-|+.|.......... ....+. .. ....+... .+|+..... +.-||+|
T Consensus 552 f~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~-d~-e~y~yikS------------YSPYdNV~a----~~YP~il 613 (682)
T COG1770 552 FAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPL-DP-EYYDYIKS------------YSPYDNVEA----QPYPAIL 613 (682)
T ss_pred hhheeecCCccchhhhhcCCCCCCCccchhhhCCcC-CH-HHHHHHhh------------cCchhcccc----CCCCceE
Confidence 9999999999986544221110 000111 11 11111222 233332222 3367999
Q ss_pred EEEcCcC--cchhhHHHHHHHHHHCC---CcEEEEEeCCCceeee
Q 020406 262 VVVGGSD--LLKDRAEDYAKTLKNFG---KKVEYVEFEGKQHGFF 301 (326)
Q Consensus 262 ii~G~~D--~~~~~~~~~~~~l~~~g---~~~~l~~~~~~~H~~~ 301 (326)
++.|.+| |..=+..+...+|+..+ .++-+.+=.++||+-.
T Consensus 614 v~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~ 658 (682)
T COG1770 614 VTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGA 658 (682)
T ss_pred EEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCC
Confidence 9999999 44334455556776544 4567777788899643
No 121
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.16 E-value=4.8e-10 Score=100.71 Aligned_cols=107 Identities=21% Similarity=0.197 Sum_probs=73.6
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchh-HHHHHhhcC-CcEEEeecCCCCCCCCCch-------HHHHHHHHHHHHHHHhh
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQN-YCFKLASEL-QAVIISPDYRLAPENRLPA-------AIEDGYMAVKWLQAQAV 142 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~-~~~~la~~~-g~~vi~~d~r~~~~~~~~~-------~~~d~~~~~~~l~~~~~ 142 (326)
..+|++|++||.+. .+... .|.. ++..+..+. .+.|+++|++..+...++. ..+++...+++|.+..
T Consensus 39 ~~~ptvIlIHG~~~-s~~~~--~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~- 114 (442)
T TIGR03230 39 HETKTFIVIHGWTV-TGMFE--SWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEF- 114 (442)
T ss_pred CCCCeEEEECCCCc-CCcch--hhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhh-
Confidence 56799999996422 12111 1333 344444332 5999999999765554442 2245566677776543
Q ss_pred cCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 143 ANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 143 ~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
+++.++++|+||||||++|..++.+ .+.++.++++++|.-
T Consensus 115 ----------gl~l~~VhLIGHSLGAhIAg~ag~~--------~p~rV~rItgLDPAg 154 (442)
T TIGR03230 115 ----------NYPWDNVHLLGYSLGAHVAGIAGSL--------TKHKVNRITGLDPAG 154 (442)
T ss_pred ----------CCCCCcEEEEEECHHHHHHHHHHHh--------CCcceeEEEEEcCCC
Confidence 3567899999999999999999887 678899999999853
No 122
>COG0627 Predicted esterase [General function prediction only]
Probab=99.15 E-value=2.6e-10 Score=98.40 Aligned_cols=233 Identities=15% Similarity=0.163 Sum_probs=128.3
Q ss_pred EEEEccCCC----CCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCC-C------------CCCCC-
Q 020406 61 LRLYKPALP----VSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYR-L------------APENR- 122 (326)
Q Consensus 61 ~~~~~P~~~----~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r-~------------~~~~~- 122 (326)
+.++.|..+ ...+.|+++++||- .+.........-+.+.+.+.|++++.+|-. . .....
T Consensus 37 ~~v~~~~~p~s~~m~~~ipV~~~l~G~---t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sf 113 (316)
T COG0627 37 FPVELPPVPASPSMGRDIPVLYLLSGL---TCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASF 113 (316)
T ss_pred cccccCCcccccccCCCCCEEEEeCCC---CCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccce
Confidence 445555443 24678999999974 222111112334677777889999998533 0 00111
Q ss_pred CchHHHH-----HHHHHHHHHHHhhc-CCCCcccccccCC--CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEE
Q 020406 123 LPAAIED-----GYMAVKWLQAQAVA-NEPDTWLTEVADF--GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYI 194 (326)
Q Consensus 123 ~~~~~~d-----~~~~~~~l~~~~~~-~~~~~~~~~~~d~--~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~i 194 (326)
|...... -.....+|.++.+. +.+ -+..+. ++..|+||||||+-|+.+|++ ++++++.+.
T Consensus 114 Y~d~~~~~~~~~~~q~~tfl~~ELP~~~~~----~f~~~~~~~~~aI~G~SMGG~GAl~lA~~--------~pd~f~~~s 181 (316)
T COG0627 114 YSDWTQPPWASGPYQWETFLTQELPALWEA----AFPADGTGDGRAIAGHSMGGYGALKLALK--------HPDRFKSAS 181 (316)
T ss_pred ecccccCccccCccchhHHHHhhhhHHHHH----hcCcccccCCceeEEEeccchhhhhhhhh--------Ccchhceec
Confidence 1111000 12223333333321 000 012343 389999999999999999999 889999999
Q ss_pred EeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCC---C-------cccCCCCcEEEEE
Q 020406 195 LLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSP---S-------LEAVDLDPILVVV 264 (326)
Q Consensus 195 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~P~lii~ 264 (326)
.++|+++........... .... -...+..+++......-...++.....+ . ... ..+++++-+
T Consensus 182 S~Sg~~~~s~~~~~~~~~--~~~~----g~~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~-~~~~~~~d~ 254 (316)
T COG0627 182 SFSGILSPSSPWGPTLAM--GDPW----GGKAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGG-SPPELLIDN 254 (316)
T ss_pred cccccccccccccccccc--cccc----cCccHHHhcCCCccccccccCchhHHHHhhhcccccceeccc-CCCcccccc
Confidence 999998766332211000 0000 0111122222221111111111111110 0 000 245899999
Q ss_pred cCcCcchh----hHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 265 GGSDLLKD----RAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 265 G~~D~~~~----~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
|..|.+.. ..+.+.+++.+.|.+..+...++..|.|.++. ..++.+..|+.
T Consensus 255 g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~w~-------~~l~~~~~~~a 309 (316)
T COG0627 255 GPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYFWA-------SQLADHLPWLA 309 (316)
T ss_pred ccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHHHH-------HHHHHHHHHHH
Confidence 99995543 36889999999998889999999999987654 45555555554
No 123
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=99.15 E-value=1.9e-09 Score=90.23 Aligned_cols=195 Identities=17% Similarity=0.153 Sum_probs=121.3
Q ss_pred CeEEEEEccCCC-CCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcC---CcEEEeecCCCC-----CCCCCchHHH
Q 020406 58 DLSLRLYKPALP-VSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASEL---QAVIISPDYRLA-----PENRLPAAIE 128 (326)
Q Consensus 58 ~~~~~~~~P~~~-~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~---g~~vi~~d~r~~-----~~~~~~~~~~ 128 (326)
..+.-+|.|.+. +..+.|+++++||--|..... ..+.+..+..+. ..+++.+|+-.. ..+.....+.
T Consensus 81 ~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~----i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~ 156 (299)
T COG2382 81 ERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGR----IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWR 156 (299)
T ss_pred ceeEEEEeCCCCCccccccEEEEeccHHHHhcCC----hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHH
Confidence 456667888765 567899999999865533222 345566666542 367888887531 1112222233
Q ss_pred HHHH-HHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCC
Q 020406 129 DGYM-AVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKK 207 (326)
Q Consensus 129 d~~~-~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~ 207 (326)
.+.. .+=++.+..+- .-+.++-+|+|.|+||.+++..+++ +|..|..+++.||.++......
T Consensus 157 ~L~~eLlP~v~~~yp~---------~~~a~~r~L~G~SlGG~vsL~agl~--------~Pe~FG~V~s~Sps~~~~~~~~ 219 (299)
T COG2382 157 FLAQELLPYVEERYPT---------SADADGRVLAGDSLGGLVSLYAGLR--------HPERFGHVLSQSGSFWWTPLDT 219 (299)
T ss_pred HHHHHhhhhhhccCcc---------cccCCCcEEeccccccHHHHHHHhc--------CchhhceeeccCCccccCcccc
Confidence 3322 33455544322 2455778999999999999999999 9999999999999887654321
Q ss_pred ccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCc
Q 020406 208 SEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKK 287 (326)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~ 287 (326)
..... . ....+-....... ..-++...|+.+.+....+++++.|++.+.+
T Consensus 220 ~~~~~----------~---------------~~~l~~~~a~~~~-----~~~~l~~g~~~~~~~~pNr~L~~~L~~~g~~ 269 (299)
T COG2382 220 QPQGE----------V---------------AESLKILHAIGTD-----ERIVLTTGGEEGDFLRPNRALAAQLEKKGIP 269 (299)
T ss_pred ccccc----------h---------------hhhhhhhhccCcc-----ceEEeecCCccccccchhHHHHHHHHhcCCc
Confidence 10000 0 0000000000010 1123333333347788999999999999999
Q ss_pred EEEEEeCCCceeeeecC
Q 020406 288 VEYVEFEGKQHGFFTID 304 (326)
Q Consensus 288 ~~l~~~~~~~H~~~~~~ 304 (326)
+.+..|+| ||.+..+.
T Consensus 270 ~~yre~~G-gHdw~~Wr 285 (299)
T COG2382 270 YYYREYPG-GHDWAWWR 285 (299)
T ss_pred ceeeecCC-CCchhHhH
Confidence 99999999 99887654
No 124
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.14 E-value=7.3e-10 Score=95.43 Aligned_cols=120 Identities=22% Similarity=0.145 Sum_probs=83.4
Q ss_pred eeeeEecCCC---CeEEEEEccCCCCC----CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCC
Q 020406 48 WKDVVFDPVH---DLSLRLYKPALPVS----TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPE 120 (326)
Q Consensus 48 ~~~v~~~~~~---~~~~~~~~P~~~~~----~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~ 120 (326)
...+.+.+.. .+.+++|.|..... ...|+|++-||.|-. .. ++......+++. ||+|..+++..+..
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~---~~--~f~~~A~~lAs~-Gf~Va~~~hpgs~~ 111 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSY---VT--GFAWLAEHLASY-GFVVAAPDHPGSNA 111 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCC---cc--chhhhHHHHhhC-ceEEEeccCCCccc
Confidence 5566665433 58999999987533 488999999996432 22 244455666655 99999999985422
Q ss_pred CC----------C-----chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 121 NR----------L-----PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 121 ~~----------~-----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.. + -....|+...+++|.+.... |.+...+|+.+|+++|||+||+.++.++..
T Consensus 112 ~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s----P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 112 GGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS----PALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred ccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC----cccccccCccceEEEecccccHHHHHhccc
Confidence 11 1 13456888888888877211 222336999999999999999999998753
No 125
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.10 E-value=6.9e-09 Score=82.12 Aligned_cols=151 Identities=23% Similarity=0.254 Sum_probs=85.0
Q ss_pred EEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCC
Q 020406 77 FYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADF 156 (326)
Q Consensus 77 vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~ 156 (326)
|+++||-+- ..... |..+..+-.... +.|-.++. ..| ++...+..+.+.... +|
T Consensus 1 v~IvhG~~~--s~~~H--W~~wl~~~l~~~-~~V~~~~~-~~P---------~~~~W~~~l~~~i~~----------~~- 54 (171)
T PF06821_consen 1 VLIVHGYGG--SPPDH--WQPWLERQLENS-VRVEQPDW-DNP---------DLDEWVQALDQAIDA----------ID- 54 (171)
T ss_dssp EEEE--TTS--STTTS--THHHHHHHHTTS-EEEEEC---TS-----------HHHHHHHHHHCCHC-----------T-
T ss_pred CEEeCCCCC--CCccH--HHHHHHHhCCCC-eEEecccc-CCC---------CHHHHHHHHHHHHhh----------cC-
Confidence 689996432 22222 666665555553 66666554 111 333444445444322 22
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC-cccCCccccCCCcccCCHHHHHHHHHhcCCCCC
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG-TVRKKSEAEGPREAFLNLELIDRFWRLSIPIGE 235 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (326)
++++++|||+|...++.++... ...+++|++|++|+... .......
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~-------~~~~v~g~lLVAp~~~~~~~~~~~~-------------------------- 101 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQ-------SQKKVAGALLVAPFDPDDPEPFPPE-------------------------- 101 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHT-------CCSSEEEEEEES--SCGCHHCCTCG--------------------------
T ss_pred CCeEEEEeCHHHHHHHHHHhhc-------ccccccEEEEEcCCCcccccchhhh--------------------------
Confidence 5699999999999999999431 66899999999997532 0000000
Q ss_pred CCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeee
Q 020406 236 TTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFF 301 (326)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~ 301 (326)
.....+.... .... |.+++.+++| ++.+.+..+++++. .+++.++++|| |.
T Consensus 102 ---~~~f~~~p~~-----~l~~-~~~viaS~nDp~vp~~~a~~~A~~l~-----a~~~~~~~~GH-f~ 154 (171)
T PF06821_consen 102 ---LDGFTPLPRD-----PLPF-PSIVIASDNDPYVPFERAQRLAQRLG-----AELIILGGGGH-FN 154 (171)
T ss_dssp ---GCCCTTSHCC-----HHHC-CEEEEEETTBSSS-HHHHHHHHHHHT------EEEEETS-TT-SS
T ss_pred ---ccccccCccc-----ccCC-CeEEEEcCCCCccCHHHHHHHHHHcC-----CCeEECCCCCC-cc
Confidence 0000000000 0002 7799999999 66778888998884 37999999999 44
No 126
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.08 E-value=5.5e-09 Score=84.92 Aligned_cols=87 Identities=11% Similarity=0.071 Sum_probs=57.8
Q ss_pred chhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHH
Q 020406 95 CQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNL 174 (326)
Q Consensus 95 ~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 174 (326)
|..+..++-.. +.++.+.|++-....-...+.|+.+..+.+....... .-.....++||||||.+|..+
T Consensus 23 fr~W~~~lp~~--iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~---------~~d~P~alfGHSmGa~lAfEv 91 (244)
T COG3208 23 FRSWSRRLPAD--IELLAVQLPGRGDRFGEPLLTDIESLADELANELLPP---------LLDAPFALFGHSMGAMLAFEV 91 (244)
T ss_pred HHHHHhhCCch--hheeeecCCCcccccCCcccccHHHHHHHHHHHhccc---------cCCCCeeecccchhHHHHHHH
Confidence 66666666443 8888889987665544455667777777776665310 122579999999999999999
Q ss_pred HHHHHhCCCCCCCcceeEEEEec
Q 020406 175 AVRLKAGSLELAPVRVKGYILLA 197 (326)
Q Consensus 175 a~~~~~~~~~~~~~~i~~~il~~ 197 (326)
|.+ +..... . +.+++..+
T Consensus 92 Arr--l~~~g~--~-p~~lfisg 109 (244)
T COG3208 92 ARR--LERAGL--P-PRALFISG 109 (244)
T ss_pred HHH--HHHcCC--C-cceEEEec
Confidence 988 233332 2 55555443
No 127
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.02 E-value=2.6e-08 Score=85.98 Aligned_cols=44 Identities=25% Similarity=0.358 Sum_probs=39.7
Q ss_pred CcEEEEEcCcC--cchhhHHHHHHHHHHCC-CcEEEEEeCCCceeee
Q 020406 258 DPILVVVGGSD--LLKDRAEDYAKTLKNFG-KKVEYVEFEGKQHGFF 301 (326)
Q Consensus 258 ~P~lii~G~~D--~~~~~~~~~~~~l~~~g-~~~~l~~~~~~~H~~~ 301 (326)
.|++|.||..| ++......+++++.+.| .+++++.+++.+|...
T Consensus 220 ~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 220 VPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 49999999999 77888999999999999 8999999999999543
No 128
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.98 E-value=1.1e-07 Score=79.91 Aligned_cols=102 Identities=25% Similarity=0.264 Sum_probs=63.4
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcC-CcEEEeecCCCCCCCC-CchHHHHHHHHHHHHHHHhhcCCCCcccc
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASEL-QAVIISPDYRLAPENR-LPAAIEDGYMAVKWLQAQAVANEPDTWLT 151 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~-g~~vi~~d~r~~~~~~-~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 151 (326)
.|.|+++||++..... |......+.... .|.++.+|.|+.+.+. ...........+..+.+.
T Consensus 21 ~~~i~~~hg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~----------- 84 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-----WRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDA----------- 84 (282)
T ss_pred CCeEEEeCCCCCchhh-----hHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHH-----------
Confidence 4599999986432222 323222222221 1899999999766553 000111112222223222
Q ss_pred cccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 152 EVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 152 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
....++.++|||+||.+++.++.+ .+..+++++++++...
T Consensus 85 --~~~~~~~l~G~S~Gg~~~~~~~~~--------~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 85 --LGLEKVVLVGHSMGGAVALALALR--------HPDRVRGLVLIGPAPP 124 (282)
T ss_pred --hCCCceEEEEecccHHHHHHHHHh--------cchhhheeeEecCCCC
Confidence 223559999999999999999999 7789999999997643
No 129
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.94 E-value=4.9e-08 Score=89.29 Aligned_cols=134 Identities=21% Similarity=0.219 Sum_probs=96.4
Q ss_pred ceeeeeEecCCCC--eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHH---HHhhcCCcEEEeecCCCCCC
Q 020406 46 VVWKDVVFDPVHD--LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCF---KLASELQAVIISPDYRLAPE 120 (326)
Q Consensus 46 ~~~~~v~~~~~~~--~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~---~la~~~g~~vi~~d~r~~~~ 120 (326)
+..+++.++..|+ +.++||.|++. ++.|+++..+=..|............... .++.+ ||+|+..|-|++..
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~--g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~-GYavV~qDvRG~~~ 93 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA--GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQ-GYAVVNQDVRGRGG 93 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC--CCCceeEEeeccccccccccCcchhhcccccceeecC-ceEEEEeccccccc
Confidence 5556666665554 77889999975 89999999992222222100100111222 24444 99999999997654
Q ss_pred CC------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEE
Q 020406 121 NR------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYI 194 (326)
Q Consensus 121 ~~------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~i 194 (326)
+. .....+|-.+.|+|+.++.-++ .+|+.+|.|++|+..+++|+. .++.+++++
T Consensus 94 SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsN------------G~Vgm~G~SY~g~tq~~~Aa~--------~pPaLkai~ 153 (563)
T COG2936 94 SEGVFDPESSREAEDGYDTIEWLAKQPWSN------------GNVGMLGLSYLGFTQLAAAAL--------QPPALKAIA 153 (563)
T ss_pred CCcccceeccccccchhHHHHHHHhCCccC------------CeeeeecccHHHHHHHHHHhc--------CCchheeec
Confidence 42 1247889999999999987443 599999999999999999998 889999999
Q ss_pred EeccccCC
Q 020406 195 LLAPFFGG 202 (326)
Q Consensus 195 l~~p~~~~ 202 (326)
...+..+.
T Consensus 154 p~~~~~D~ 161 (563)
T COG2936 154 PTEGLVDR 161 (563)
T ss_pred cccccccc
Confidence 98887764
No 130
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.91 E-value=2.5e-08 Score=78.46 Aligned_cols=182 Identities=19% Similarity=0.235 Sum_probs=107.8
Q ss_pred EEEEEcC-CccccCCCCCCcchhHHHHHhhcCCcEEEeecCC--CCCCCCCchHHHHHHHHHHHHHHHhhcCCCCccccc
Q 020406 76 IFYYIHG-GGFCIGSRTWPNCQNYCFKLASELQAVIISPDYR--LAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTE 152 (326)
Q Consensus 76 ~vv~~HG-gg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r--~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 152 (326)
.+||+-| |||..- ....+..|+++ |+.|+.+|-. ...+..-.+...|+..+++...++-
T Consensus 4 ~~v~~SGDgGw~~~------d~~~a~~l~~~-G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w----------- 65 (192)
T PF06057_consen 4 LAVFFSGDGGWRDL------DKQIAEALAKQ-GVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARW----------- 65 (192)
T ss_pred EEEEEeCCCCchhh------hHHHHHHHHHC-CCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHh-----------
Confidence 4666666 565421 34567777776 9999999943 1122222345678888888777764
Q ss_pred ccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCC
Q 020406 153 VADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIP 232 (326)
Q Consensus 153 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (326)
..++++|+|.|.|+-+.....-+ ++. ....+|+.+++++|.......... ..++.
T Consensus 66 --~~~~vvLiGYSFGADvlP~~~nr--Lp~--~~r~~v~~v~Ll~p~~~~dFeihv-------------------~~wlg 120 (192)
T PF06057_consen 66 --GRKRVVLIGYSFGADVLPFIYNR--LPA--ALRARVAQVVLLSPSTTADFEIHV-------------------SGWLG 120 (192)
T ss_pred --CCceEEEEeecCCchhHHHHHhh--CCH--HHHhheeEEEEeccCCcceEEEEh-------------------hhhcC
Confidence 33899999999999888777655 121 123789999999986533221100 00000
Q ss_pred CCCCCC-CCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHH
Q 020406 233 IGETTD-HPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSED 309 (326)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~ 309 (326)
...... .+... ...+....|++.|+|++| ..++ .+++ .+++.+..||..| |. +.
T Consensus 121 ~~~~~~~~~~~p-------ei~~l~~~~v~CiyG~~E~d~~cp-------~l~~--~~~~~i~lpGgHH-fd------~d 177 (192)
T PF06057_consen 121 MGGDDAAYPVIP-------EIAKLPPAPVQCIYGEDEDDSLCP-------SLRQ--PGVEVIALPGGHH-FD------GD 177 (192)
T ss_pred CCCCcccCCchH-------HHHhCCCCeEEEEEcCCCCCCcCc-------cccC--CCcEEEEcCCCcC-CC------CC
Confidence 000000 01011 111111339999999998 3332 2333 3568999999666 54 34
Q ss_pred HHHHHHHHHHHhhh
Q 020406 310 ANRLMQIIKHFIAE 323 (326)
Q Consensus 310 ~~~~~~~~~~fl~~ 323 (326)
...+.+.|++-|++
T Consensus 178 y~~La~~Il~~l~~ 191 (192)
T PF06057_consen 178 YDALAKRILDALKA 191 (192)
T ss_pred HHHHHHHHHHHHhc
Confidence 57777777777654
No 131
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.85 E-value=5.8e-07 Score=82.71 Aligned_cols=131 Identities=17% Similarity=0.132 Sum_probs=83.1
Q ss_pred eeeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCC--CCCcchhHHHHHhhcCCcEEEeecCCCCCCC---
Q 020406 47 VWKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSR--TWPNCQNYCFKLASELQAVIISPDYRLAPEN--- 121 (326)
Q Consensus 47 ~~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~--~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~--- 121 (326)
+...|.+.++ -+.+.-|.|.... .....||+++ +++.... +......+++.+..+ |+.|+.+|.+.....
T Consensus 190 TPg~VV~~n~-l~eLiqY~P~te~-v~~~PLLIVP--p~INK~YIlDL~P~~SlVr~lv~q-G~~VflIsW~nP~~~~r~ 264 (560)
T TIGR01839 190 TEGAVVFRNE-VLELIQYKPITEQ-QHARPLLVVP--PQINKFYIFDLSPEKSFVQYCLKN-QLQVFIISWRNPDKAHRE 264 (560)
T ss_pred CCCceeEECC-ceEEEEeCCCCCC-cCCCcEEEec--hhhhhhheeecCCcchHHHHHHHc-CCeEEEEeCCCCChhhcC
Confidence 3355555543 4677778776532 3334466677 3331111 111135677777776 999999999864332
Q ss_pred -CCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHH----HHHHHHhCCCCCCCc-ceeEEEE
Q 020406 122 -RLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHN----LAVRLKAGSLELAPV-RVKGYIL 195 (326)
Q Consensus 122 -~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~----~a~~~~~~~~~~~~~-~i~~~il 195 (326)
.+.+.++.+..+++.+++.. ..++|.++|+|+||.+++. ++++ .++ +|+.+++
T Consensus 265 ~~ldDYv~~i~~Ald~V~~~t-------------G~~~vnl~GyC~GGtl~a~~~a~~aA~--------~~~~~V~sltl 323 (560)
T TIGR01839 265 WGLSTYVDALKEAVDAVRAIT-------------GSRDLNLLGACAGGLTCAALVGHLQAL--------GQLRKVNSLTY 323 (560)
T ss_pred CCHHHHHHHHHHHHHHHHHhc-------------CCCCeeEEEECcchHHHHHHHHHHHhc--------CCCCceeeEEe
Confidence 22344455666777776653 3479999999999999997 4444 443 7999999
Q ss_pred eccccCCc
Q 020406 196 LAPFFGGT 203 (326)
Q Consensus 196 ~~p~~~~~ 203 (326)
+...+|..
T Consensus 324 latplDf~ 331 (560)
T TIGR01839 324 LVSLLDST 331 (560)
T ss_pred eecccccC
Confidence 88877754
No 132
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.84 E-value=5.7e-07 Score=77.57 Aligned_cols=113 Identities=19% Similarity=0.212 Sum_probs=74.8
Q ss_pred eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhH-HHHHhhcCCcEEEeecCCCCCCC-----------CC---
Q 020406 59 LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNY-CFKLASELQAVIISPDYRLAPEN-----------RL--- 123 (326)
Q Consensus 59 ~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~-~~~la~~~g~~vi~~d~r~~~~~-----------~~--- 123 (326)
-.+.+..|.......+|++|.+.|.| +...+.-..+ +..|+.+ |+..+.+..+..+.. ..
T Consensus 77 a~~~~~~P~~~~~~~rp~~IhLagTG----Dh~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl 151 (348)
T PF09752_consen 77 ARFQLLLPKRWDSPYRPVCIHLAGTG----DHGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDL 151 (348)
T ss_pred eEEEEEECCccccCCCceEEEecCCC----ccchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHH
Confidence 34556677754345789999999864 3322111223 6778877 998888774422211 01
Q ss_pred ----chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 124 ----PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 124 ----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
...+.++...+.|+.++. ..+++|.|.||||++|...+.. .|..+..+-.+++
T Consensus 152 ~~~g~~~i~E~~~Ll~Wl~~~G--------------~~~~g~~G~SmGG~~A~laa~~--------~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 152 FVMGRATILESRALLHWLEREG--------------YGPLGLTGISMGGHMAALAASN--------WPRPVALVPCLSW 208 (348)
T ss_pred HHHHhHHHHHHHHHHHHHHhcC--------------CCceEEEEechhHhhHHhhhhc--------CCCceeEEEeecc
Confidence 235778888899999873 1599999999999999998887 5555554444444
No 133
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.82 E-value=6.5e-07 Score=75.22 Aligned_cols=152 Identities=16% Similarity=0.167 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCccc
Q 020406 126 AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVR 205 (326)
Q Consensus 126 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~ 205 (326)
...-+..++.+|+++. ..+++-++||||||..++.++.. ......-+.+..+|++++.++....
T Consensus 85 qa~wl~~vl~~L~~~Y-------------~~~~~N~VGHSmGg~~~~~yl~~---~~~~~~~P~l~K~V~Ia~pfng~~~ 148 (255)
T PF06028_consen 85 QAKWLKKVLKYLKKKY-------------HFKKFNLVGHSMGGLSWTYYLEN---YGNDKNLPKLNKLVTIAGPFNGILG 148 (255)
T ss_dssp HHHHHHHHHHHHHHCC---------------SEEEEEEETHHHHHHHHHHHH---CTTGTTS-EEEEEEEES--TTTTTC
T ss_pred HHHHHHHHHHHHHHhc-------------CCCEEeEEEECccHHHHHHHHHH---hccCCCCcccceEEEeccccCcccc
Confidence 3444555667776653 34899999999999999999988 2333334688999999877765433
Q ss_pred CCccc----cCCCcccCCHHHHHHHHHh---cCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcC------cC--cc
Q 020406 206 KKSEA----EGPREAFLNLELIDRFWRL---SIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGG------SD--LL 270 (326)
Q Consensus 206 ~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~------~D--~~ 270 (326)
..... -....+-......+.+... .++ . ...+|-|.|. .| |+
T Consensus 149 ~~~~~~~~~~~~~gp~~~~~~y~~l~~~~~~~~p-----------------~------~i~VLnI~G~~~~g~~sDG~V~ 205 (255)
T PF06028_consen 149 MNDDQNQNDLNKNGPKSMTPMYQDLLKNRRKNFP-----------------K------NIQVLNIYGDLEDGSNSDGIVP 205 (255)
T ss_dssp CSC-TTTT-CSTT-BSS--HHHHHHHHTHGGGST-----------------T------T-EEEEEEEESBTTCSBTSSSB
T ss_pred ccccchhhhhcccCCcccCHHHHHHHHHHHhhCC-----------------C------CeEEEEEecccCCCCCCCeEEe
Confidence 21110 0011122222333333221 110 0 2279999998 66 77
Q ss_pred hhhHHHHHHHHHHCCCcEEEEEeCC--CceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 271 KDRAEDYAKTLKNFGKKVEYVEFEG--KQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 271 ~~~~~~~~~~l~~~g~~~~l~~~~~--~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
..++..+---++.....++-.++.| +.|.-.. +..++.+.|.+||-
T Consensus 206 ~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lh------eN~~V~~~I~~FLw 253 (255)
T PF06028_consen 206 NASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLH------ENPQVDKLIIQFLW 253 (255)
T ss_dssp HHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGG------CCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhcccCceEEEEEECCCCccccCC------CCHHHHHHHHHHhc
Confidence 7677666666666667788888876 4784432 34688889999984
No 134
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.79 E-value=5.5e-08 Score=80.23 Aligned_cols=119 Identities=19% Similarity=0.119 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccC
Q 020406 127 IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRK 206 (326)
Q Consensus 127 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~ 206 (326)
..++.++++++.+.....+ .-.+|+|+|.||.+|+.++..............++.+|+++++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~~G-----------PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~ 151 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG-----------PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY 151 (212)
T ss_dssp G---HHHHHHHHHHHHHH--------------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G
T ss_pred ccCHHHHHHHHHHHHHhcC-----------CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh
Confidence 5566777777777665432 24789999999999999987521111111346789999999876322110
Q ss_pred CccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchh--hHHHHHHHHHHC
Q 020406 207 KSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKD--RAEDYAKTLKNF 284 (326)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~l~~~ 284 (326)
..+...... ..|+|-++|++|.+.+ .++.+++.....
T Consensus 152 ------------------------------------~~~~~~~~i-----~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~ 190 (212)
T PF03959_consen 152 ------------------------------------QELYDEPKI-----SIPTLHVIGENDPVVPPERSEALAEMFDPD 190 (212)
T ss_dssp ------------------------------------TTTT--TT--------EEEEEEETT-SSS-HHHHHHHHHHHHHH
T ss_pred ------------------------------------hhhhccccC-----CCCeEEEEeCCCCCcchHHHHHHHHhccCC
Confidence 000000000 2399999999995544 888888888764
Q ss_pred CCcEEEEEeCCCceeee
Q 020406 285 GKKVEYVEFEGKQHGFF 301 (326)
Q Consensus 285 g~~~~l~~~~~~~H~~~ 301 (326)
.++...++ ||.+.
T Consensus 191 ---~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 191 ---ARVIEHDG-GHHVP 203 (212)
T ss_dssp ---EEEEEESS-SSS--
T ss_pred ---cEEEEECC-CCcCc
Confidence 47777777 67554
No 135
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.76 E-value=5.6e-08 Score=92.97 Aligned_cols=93 Identities=25% Similarity=0.229 Sum_probs=61.6
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC-----------------------------
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR----------------------------- 122 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~----------------------------- 122 (326)
...|+||++||- .+.... |..++..|+.+ ||.|+++|+|+++.+.
T Consensus 447 ~g~P~VVllHG~---~g~~~~--~~~lA~~La~~-Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRD 520 (792)
T TIGR03502 447 DGWPVVIYQHGI---TGAKEN--ALAFAGTLAAA-GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARD 520 (792)
T ss_pred CCCcEEEEeCCC---CCCHHH--HHHHHHHHHhC-CcEEEEeCCCCCCccccccccccccccccCccceecccccccccc
Confidence 346899999974 233332 66777777766 9999999998655441
Q ss_pred -CchHHHHHHHHHHHHH------HHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 123 -LPAAIEDGYMAVKWLQ------AQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 123 -~~~~~~d~~~~~~~l~------~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
+.+.+.|+......+. ......+ ..+..+++++||||||.++..++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~-------~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGIN-------VIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhccccccccccccc-------CCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1233445555444444 1100111 2556899999999999999999976
No 136
>PRK04940 hypothetical protein; Provisional
Probab=98.75 E-value=6.9e-07 Score=70.23 Aligned_cols=119 Identities=22% Similarity=0.289 Sum_probs=70.9
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCc-ccCCHHHHHHHHHhcCCCCC
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPRE-AFLNLELIDRFWRLSIPIGE 235 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 235 (326)
+++.|+|.|+||+-|.+++.+ -.+ ..|+++|.+............+.. ..+...-++.+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~----------~g~-~aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL--------- 119 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFL----------CGI-RQVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNF--------- 119 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHH----------HCC-CEEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHh---------
Confidence 479999999999999999988 223 467888887654321111111000 01111111111
Q ss_pred CCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHH
Q 020406 236 TTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQ 315 (326)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~ 315 (326)
.... -...+++..+.|...+ -++..+++... .+..+.+|++|.|. ..++.+.
T Consensus 120 ----------~~~~-------p~r~~vllq~gDEvLD-yr~a~~~y~~~---y~~~v~~GGdH~f~-------~fe~~l~ 171 (180)
T PRK04940 120 ----------REKN-------RDRCLVILSRNDEVLD-SQRTAEELHPY---YEIVWDEEQTHKFK-------NISPHLQ 171 (180)
T ss_pred ----------hhcC-------cccEEEEEeCCCcccC-HHHHHHHhccC---ceEEEECCCCCCCC-------CHHHHHH
Confidence 0000 1157999999995543 23333444322 26899999999886 4568899
Q ss_pred HHHHHhhh
Q 020406 316 IIKHFIAE 323 (326)
Q Consensus 316 ~~~~fl~~ 323 (326)
.|.+|++.
T Consensus 172 ~I~~F~~~ 179 (180)
T PRK04940 172 RIKAFKTL 179 (180)
T ss_pred HHHHHHhc
Confidence 99999853
No 137
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.74 E-value=8.3e-07 Score=79.20 Aligned_cols=67 Identities=15% Similarity=0.106 Sum_probs=48.4
Q ss_pred CCCcEEEEEcCcC--cchhhHHHHHHHHHHCC-CcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 256 DLDPILVVVGGSD--LLKDRAEDYAKTLKNFG-KKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 256 ~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g-~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
...|+|.+-|++| ++..++..+.+.....+ ...+.++.+++||. -++. ...-.+++...+.+||.++
T Consensus 337 ~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~-Gvf~-G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 337 TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHY-GVFS-GSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeE-EEee-ChhhhhhhchHHHHHHHhC
Confidence 3369999999999 77778877777653333 34567788888994 4444 2345678899999999875
No 138
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.73 E-value=4.9e-08 Score=85.48 Aligned_cols=111 Identities=17% Similarity=0.135 Sum_probs=64.0
Q ss_pred CCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhc--CCcEEEeecCCCCCCCCCchHHH-------HHHHHHHHHHHHh
Q 020406 71 STKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASE--LQAVIISPDYRLAPENRLPAAIE-------DGYMAVKWLQAQA 141 (326)
Q Consensus 71 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~--~g~~vi~~d~r~~~~~~~~~~~~-------d~~~~~~~l~~~~ 141 (326)
+..+|++|++| ||............+...+..+ ..+.||.+|+.......+..... .+...+.+|.+..
T Consensus 68 n~~~pt~iiiH--Gw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 68 NPSKPTVIIIH--GWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp -TTSEEEEEE----TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEc--CcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 45789999999 5654441221234445556555 58999999998543334544332 2333455555332
Q ss_pred hcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 142 VANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 142 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
++++++|+|+|||+||++|-.++.+. .. ..++..+..+.|.-
T Consensus 146 -----------g~~~~~ihlIGhSLGAHvaG~aG~~~--~~----~~ki~rItgLDPAg 187 (331)
T PF00151_consen 146 -----------GVPPENIHLIGHSLGAHVAGFAGKYL--KG----GGKIGRITGLDPAG 187 (331)
T ss_dssp --------------GGGEEEEEETCHHHHHHHHHHHT--TT-------SSEEEEES-B-
T ss_pred -----------CCChhHEEEEeeccchhhhhhhhhhc--cC----cceeeEEEecCccc
Confidence 47889999999999999999888771 11 24888999998865
No 139
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.73 E-value=1.2e-06 Score=72.66 Aligned_cols=120 Identities=16% Similarity=0.121 Sum_probs=76.6
Q ss_pred cccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcC
Q 020406 152 EVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSI 231 (326)
Q Consensus 152 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (326)
|.+|.++..|+|||+||.+++..... .|..+...+++||.+.+........
T Consensus 132 y~~~~~~~~i~GhSlGGLfvl~aLL~--------~p~~F~~y~~~SPSlWw~n~~~l~~--------------------- 182 (264)
T COG2819 132 YRTNSERTAIIGHSLGGLFVLFALLT--------YPDCFGRYGLISPSLWWHNEAILRE--------------------- 182 (264)
T ss_pred cccCcccceeeeecchhHHHHHHHhc--------CcchhceeeeecchhhhCCHHHhcc---------------------
Confidence 57899999999999999999999998 8899999999999876544211000
Q ss_pred CCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCc--------chhhHHHHHHHHHH-CCCcEEEEEeCCCceeeee
Q 020406 232 PIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDL--------LKDRAEDYAKTLKN-FGKKVEYVEFEGKQHGFFT 302 (326)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~--------~~~~~~~~~~~l~~-~g~~~~l~~~~~~~H~~~~ 302 (326)
.+...+. . .. ..-+++-.|+.|. ...++.+....+++ .|..+.+..+|+.+|+-.
T Consensus 183 -------~~~~~~~-~-~~------~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~~- 246 (264)
T COG2819 183 -------IESLKLL-K-TK------RICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGARLVFQEEPLEHHGSV- 246 (264)
T ss_pred -------ccccccC-C-Cc------ceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCCceEecccccccccch-
Confidence 0000000 0 00 1134555555551 12234445555555 777889999998888543
Q ss_pred cCCCCHHHHHHHHHHHHHhhh
Q 020406 303 IDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 303 ~~~~~~~~~~~~~~~~~fl~~ 323 (326)
....+..++.|+..
T Consensus 247 -------~~~~~~~al~~l~~ 260 (264)
T COG2819 247 -------IHASLPSALRFLDC 260 (264)
T ss_pred -------HHHHHHHHHHhhhc
Confidence 24556666666643
No 140
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.71 E-value=4.8e-07 Score=75.30 Aligned_cols=125 Identities=25% Similarity=0.257 Sum_probs=81.9
Q ss_pred eeeeeEecCCCC--eEEE-EEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCC
Q 020406 47 VWKDVVFDPVHD--LSLR-LYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRL 123 (326)
Q Consensus 47 ~~~~v~~~~~~~--~~~~-~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~ 123 (326)
..+.+.++...+ +.++ +|.-..+...+..+||=+||. .|+.. ...++.....+.|+++|.++|++.+...-
T Consensus 5 ~~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGs---PGSH~---DFkYi~~~l~~~~iR~I~iN~PGf~~t~~ 78 (297)
T PF06342_consen 5 VRKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGS---PGSHN---DFKYIRPPLDEAGIRFIGINYPGFGFTPG 78 (297)
T ss_pred EEEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCC---CCCcc---chhhhhhHHHHcCeEEEEeCCCCCCCCCC
Confidence 345555555443 4555 455444444567799999986 66666 34566666677799999999997654332
Q ss_pred c-h---HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 124 P-A---AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 124 ~-~---~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
+ . .-.+-....+-+.+.. +++ ++++++|||.|+-.|++++.. . +..|+++++|.
T Consensus 79 ~~~~~~~n~er~~~~~~ll~~l-----------~i~-~~~i~~gHSrGcenal~la~~--------~--~~~g~~lin~~ 136 (297)
T PF06342_consen 79 YPDQQYTNEERQNFVNALLDEL-----------GIK-GKLIFLGHSRGCENALQLAVT--------H--PLHGLVLINPP 136 (297)
T ss_pred CcccccChHHHHHHHHHHHHHc-----------CCC-CceEEEEeccchHHHHHHHhc--------C--ccceEEEecCC
Confidence 2 1 1222223333333332 244 799999999999999999988 3 46799999874
No 141
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.67 E-value=3.2e-07 Score=78.26 Aligned_cols=111 Identities=20% Similarity=0.202 Sum_probs=74.6
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhc--CCcEEEeecCCCCCCCCC---------c-hHHHHHHHHHHHHHHHh
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASE--LQAVIISPDYRLAPENRL---------P-AAIEDGYMAVKWLQAQA 141 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~--~g~~vi~~d~r~~~~~~~---------~-~~~~d~~~~~~~l~~~~ 141 (326)
+++|+++.|. .|-... |..++..|... ..+.|+++.+.+...... . .-.+.+...++++.+..
T Consensus 2 ~~li~~IPGN---PGlv~f--Y~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGN---PGLVEF--YEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCC---CChHHH--HHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 5789999987 454443 78888888876 378999999875422111 1 12233445566666554
Q ss_pred hcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC
Q 020406 142 VANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 142 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~ 202 (326)
.... ....+++++|||.|+++++.++.+. . ....+|.+++++.|.+..
T Consensus 77 ~~~~--------~~~~~liLiGHSIGayi~levl~r~--~---~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 77 PQKN--------KPNVKLILIGHSIGAYIALEVLKRL--P---DLKFRVKKVILLFPTIED 124 (266)
T ss_pred hhhc--------CCCCcEEEEeCcHHHHHHHHHHHhc--c---ccCCceeEEEEeCCcccc
Confidence 3210 1337999999999999999999882 1 112789999999997643
No 142
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.62 E-value=5.9e-07 Score=72.82 Aligned_cols=208 Identities=12% Similarity=0.099 Sum_probs=100.3
Q ss_pred eEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCC----C----CCCC
Q 020406 51 VVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRL----A----PENR 122 (326)
Q Consensus 51 v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~----~----~~~~ 122 (326)
+.+.++..+.++=-.|+.....+.++||+..| |...... +...+.+|+.. ||.|+.+|.-. + .+..
T Consensus 7 i~~~~~~~I~vwet~P~~~~~~~~~tiliA~G--f~rrmdh---~agLA~YL~~N-GFhViRyDsl~HvGlSsG~I~eft 80 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNNEPKRNNTILIAPG--FARRMDH---FAGLAEYLSAN-GFHVIRYDSLNHVGLSSGDINEFT 80 (294)
T ss_dssp EEETTTEEEEEEEE---TTS---S-EEEEE-T--T-GGGGG---GHHHHHHHHTT-T--EEEE---B-------------
T ss_pred eEcCCCCEEEEeccCCCCCCcccCCeEEEecc--hhHHHHH---HHHHHHHHhhC-CeEEEeccccccccCCCCChhhcc
Confidence 44444444444444566655566799999995 4333322 66777777766 99999999541 1 1233
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC
Q 020406 123 LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 123 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~ 202 (326)
+.....|+..+++|++... ..+++++.-|.-|-+|...+.+ ..+.-+|+.-++.+.
T Consensus 81 ms~g~~sL~~V~dwl~~~g--------------~~~~GLIAaSLSaRIAy~Va~~----------i~lsfLitaVGVVnl 136 (294)
T PF02273_consen 81 MSIGKASLLTVIDWLATRG--------------IRRIGLIAASLSARIAYEVAAD----------INLSFLITAVGVVNL 136 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----------------EEEEEETTHHHHHHHHTTT----------S--SEEEEES--S-H
T ss_pred hHHhHHHHHHHHHHHHhcC--------------CCcchhhhhhhhHHHHHHHhhc----------cCcceEEEEeeeeeH
Confidence 4567889999999999653 3689999999999999999966 457777777777765
Q ss_pred cccCCcc----------c------cCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcC
Q 020406 203 TVRKKSE----------A------EGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGG 266 (326)
Q Consensus 203 ~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~ 266 (326)
....... . +.....+-........++.-. .........+. .. ..|++..+++
T Consensus 137 r~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w----~~l~ST~~~~k---~l-----~iP~iaF~A~ 204 (294)
T PF02273_consen 137 RDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGW----DDLDSTINDMK---RL-----SIPFIAFTAN 204 (294)
T ss_dssp HHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-----SSHHHHHHHHT---T-------S-EEEEEET
T ss_pred HHHHHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHcCC----ccchhHHHHHh---hC-----CCCEEEEEeC
Confidence 4321100 0 000001111111222221110 00000000000 00 3399999999
Q ss_pred cCcchhhHHHHHHHHHH-CCCcEEEEEeCCCceeee
Q 020406 267 SDLLKDRAEDYAKTLKN-FGKKVEYVEFEGKQHGFF 301 (326)
Q Consensus 267 ~D~~~~~~~~~~~~l~~-~g~~~~l~~~~~~~H~~~ 301 (326)
+|..+++.+ ..+.+.. ....+++..++|..|...
T Consensus 205 ~D~WV~q~e-V~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 205 DDDWVKQSE-VEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp T-TTS-HHH-HHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred CCccccHHH-HHHHHHhcCCCceeEEEecCccchhh
Confidence 997776664 3333332 235689999999999543
No 143
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.59 E-value=2.8e-07 Score=76.65 Aligned_cols=71 Identities=25% Similarity=0.241 Sum_probs=59.1
Q ss_pred cEEEeecCCCCCCCCC-------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHh
Q 020406 108 AVIISPDYRLAPENRL-------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKA 180 (326)
Q Consensus 108 ~~vi~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~ 180 (326)
|.|+++|.|+.+.+.. .....|+...++.+.+... .++++++||||||.+++.+|..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------~~~~~~vG~S~Gg~~~~~~a~~--- 64 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALG-------------IKKINLVGHSMGGMLALEYAAQ--- 64 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHT-------------TSSEEEEEETHHHHHHHHHHHH---
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhC-------------CCCeEEEEECCChHHHHHHHHH---
Confidence 6799999998766552 1357788888888888653 2679999999999999999999
Q ss_pred CCCCCCCcceeEEEEeccc
Q 020406 181 GSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 181 ~~~~~~~~~i~~~il~~p~ 199 (326)
+|++++++++.++.
T Consensus 65 -----~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 65 -----YPERVKKLVLISPP 78 (230)
T ss_dssp -----SGGGEEEEEEESES
T ss_pred -----CchhhcCcEEEeee
Confidence 88999999999985
No 144
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.54 E-value=6.7e-06 Score=63.55 Aligned_cols=117 Identities=18% Similarity=0.209 Sum_probs=73.3
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCC
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGET 236 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (326)
..++|++||+|...++.++.+ ....|.|+++++|..-........
T Consensus 59 ~~~vlVAHSLGc~~v~h~~~~--------~~~~V~GalLVAppd~~~~~~~~~--------------------------- 103 (181)
T COG3545 59 GPVVLVAHSLGCATVAHWAEH--------IQRQVAGALLVAPPDVSRPEIRPK--------------------------- 103 (181)
T ss_pred CCeEEEEecccHHHHHHHHHh--------hhhccceEEEecCCCccccccchh---------------------------
Confidence 569999999999999999988 445999999999865322110000
Q ss_pred CCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHH
Q 020406 237 TDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLM 314 (326)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~ 314 (326)
..-...+......- + |.+++++++| +..+.++.+++.+.. .++....+|| +.... ....-.+..
T Consensus 104 -~~~tf~~~p~~~lp-----f-ps~vvaSrnDp~~~~~~a~~~a~~wgs-----~lv~~g~~GH-iN~~s-G~g~wpeg~ 169 (181)
T COG3545 104 -HLMTFDPIPREPLP-----F-PSVVVASRNDPYVSYEHAEDLANAWGS-----ALVDVGEGGH-INAES-GFGPWPEGY 169 (181)
T ss_pred -hccccCCCccccCC-----C-ceeEEEecCCCCCCHHHHHHHHHhccH-----hheecccccc-cchhh-cCCCcHHHH
Confidence 00001111111010 2 9999999999 667778878877754 5888888899 33222 222334555
Q ss_pred HHHHHHhh
Q 020406 315 QIIKHFIA 322 (326)
Q Consensus 315 ~~~~~fl~ 322 (326)
..+.+|+.
T Consensus 170 ~~l~~~~s 177 (181)
T COG3545 170 ALLAQLLS 177 (181)
T ss_pred HHHHHHhh
Confidence 55555554
No 145
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.53 E-value=3.2e-06 Score=67.70 Aligned_cols=113 Identities=21% Similarity=0.223 Sum_probs=69.0
Q ss_pred HHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCcccc
Q 020406 132 MAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAE 211 (326)
Q Consensus 132 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~ 211 (326)
..+++|.+....+|. ==+|+|+|.|+.++..++...........-+.++-+|+++++.........
T Consensus 90 esl~yl~~~i~enGP-----------FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~--- 155 (230)
T KOG2551|consen 90 ESLEYLEDYIKENGP-----------FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDE--- 155 (230)
T ss_pred HHHHHHHHHHHHhCC-----------CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhh---
Confidence 355666666555442 236999999999999998731011111223567999999987643211000
Q ss_pred CCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEE
Q 020406 212 GPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVE 289 (326)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~ 289 (326)
.....++ ..|.|-+.|+.| ++...+..+++....+ .
T Consensus 156 ---------------------------~~~~~~i-----------~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~ 193 (230)
T KOG2551|consen 156 ---------------------------SAYKRPL-----------STPSLHIFGETDTIVPSERSEQLAESFKDA----T 193 (230)
T ss_pred ---------------------------hhhccCC-----------CCCeeEEecccceeecchHHHHHHHhcCCC----e
Confidence 0001111 339999999999 5566678888887665 5
Q ss_pred EEEeCCCceeee
Q 020406 290 YVEFEGKQHGFF 301 (326)
Q Consensus 290 l~~~~~~~H~~~ 301 (326)
+...+| +|...
T Consensus 194 vl~Hpg-gH~VP 204 (230)
T KOG2551|consen 194 VLEHPG-GHIVP 204 (230)
T ss_pred EEecCC-CccCC
Confidence 555555 89544
No 146
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.48 E-value=1.5e-06 Score=72.20 Aligned_cols=110 Identities=21% Similarity=0.183 Sum_probs=65.8
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHh-------hcCCcEEEeecCCCCCC----CCCchHHHHHHHHHHHHHHHh
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLA-------SELQAVIISPDYRLAPE----NRLPAAIEDGYMAVKWLQAQA 141 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la-------~~~g~~vi~~d~r~~~~----~~~~~~~~d~~~~~~~l~~~~ 141 (326)
....|||+||. .|+... ++.+...+. ....+.+++.||..... .......+-+..+++.+.+..
T Consensus 3 ~g~pVlFIhG~---~Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGN---AGSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcC---CCCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhh
Confidence 34679999985 343321 333332221 11247888889874322 122334445556677766654
Q ss_pred hcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 142 VANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 142 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
... ...+++|+|+||||||.+|..++... ...+..++.+|.++...
T Consensus 78 ~~~--------~~~~~~vilVgHSmGGlvar~~l~~~-----~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 78 KSN--------RPPPRSVILVGHSMGGLVARSALSLP-----NYDPDSVKTIITLGTPH 123 (225)
T ss_pred hhc--------cCCCCceEEEEEchhhHHHHHHHhcc-----ccccccEEEEEEEcCCC
Confidence 211 24568999999999999998887651 11236799999887433
No 147
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.46 E-value=2.9e-06 Score=72.56 Aligned_cols=119 Identities=16% Similarity=0.226 Sum_probs=80.5
Q ss_pred eeeeEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCC-CcchhHHHHHhhcCCcEEEeecCCCCCCCC----
Q 020406 48 WKDVVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTW-PNCQNYCFKLASELQAVIISPDYRLAPENR---- 122 (326)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~-~~~~~~~~~la~~~g~~vi~~d~r~~~~~~---- 122 (326)
.+.+++.. |++.++-..=.-+..++...||+.-|.|........ ......+..++.+.+.+|+.++||+-+.+.
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s 190 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPS 190 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCC
Confidence 34455554 466666332111122566789999998776554221 012345778888899999999999644332
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 123 LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 123 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
..+.+.|..+.++||+++.. ++.+++|++.|||+||.++...+.+
T Consensus 191 ~~dLv~~~~a~v~yL~d~~~----------G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 191 RKDLVKDYQACVRYLRDEEQ----------GPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHHHHHHHHHHHHHhccc----------CCChheEEEeeccccHHHHHHHHHh
Confidence 34567788888999987653 3677999999999999999886655
No 148
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.45 E-value=2.6e-05 Score=63.76 Aligned_cols=151 Identities=18% Similarity=0.187 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCcc
Q 020406 130 GYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSE 209 (326)
Q Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~ 209 (326)
...++.+|.++ .+..++-++||||||.-...++... ..+. .-+.+...|++.+.+.........
T Consensus 122 lk~~msyL~~~-------------Y~i~k~n~VGhSmGg~~~~~Y~~~y--g~dk-s~P~lnK~V~l~gpfN~~~l~~de 185 (288)
T COG4814 122 LKKAMSYLQKH-------------YNIPKFNAVGHSMGGLGLTYYMIDY--GDDK-SLPPLNKLVSLAGPFNVGNLVPDE 185 (288)
T ss_pred HHHHHHHHHHh-------------cCCceeeeeeeccccHHHHHHHHHh--cCCC-CCcchhheEEecccccccccCCCc
Confidence 34566677766 3458999999999999999998872 3332 236678888887766522221111
Q ss_pred cc----CCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--------cchhhHHHH
Q 020406 210 AE----GPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--------LLKDRAEDY 277 (326)
Q Consensus 210 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--------~~~~~~~~~ 277 (326)
.- ............+.+...+ ..+++ ..-+++|.|+.| ++...+...
T Consensus 186 ~v~~v~~~~~~~~~t~y~~y~~~n~---------k~v~~------------~~evl~IaGDl~dg~~tDG~Vp~assls~ 244 (288)
T COG4814 186 TVTDVLKDGPGLIKTPYYDYIAKNY---------KKVSP------------NTEVLLIAGDLDDGKQTDGAVPWASSLSI 244 (288)
T ss_pred chheeeccCccccCcHHHHHHHhcc---------eeCCC------------CcEEEEEecccccCCcCCCceechHhHHH
Confidence 00 0000011111111111111 11111 227999999887 666677777
Q ss_pred HHHHHHCCCcEEEEEeCCC--ceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 278 AKTLKNFGKKVEYVEFEGK--QHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 278 ~~~l~~~g~~~~l~~~~~~--~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
...+...++.+.-.+|+|. .|.-. .+...+.+.+.+||-+
T Consensus 245 ~~lf~~~~ksy~e~~~~Gk~a~Hs~l------hen~~v~~yv~~FLw~ 286 (288)
T COG4814 245 YHLFKKNGKSYIESLYKGKDARHSKL------HENPTVAKYVKNFLWE 286 (288)
T ss_pred HHHhccCcceeEEEeeeCCcchhhcc------CCChhHHHHHHHHhhc
Confidence 7777777766665566664 67432 2346778888888854
No 149
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.41 E-value=1.3e-05 Score=71.59 Aligned_cols=133 Identities=17% Similarity=0.143 Sum_probs=83.2
Q ss_pred eeeeEecCCCC--eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCC--cchhHHHHHhhcCCcEEEeecCCCC-----
Q 020406 48 WKDVVFDPVHD--LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWP--NCQNYCFKLASELQAVIISPDYRLA----- 118 (326)
Q Consensus 48 ~~~v~~~~~~~--~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~--~~~~~~~~la~~~g~~vi~~d~r~~----- 118 (326)
.++..+.+.|+ +.+.- .|... +++|+|++.||- ...+..+. .-..-+..+....||.|..-+.|+.
T Consensus 48 ~E~h~V~T~DgYiL~lhR-Ip~~~--~~rp~Vll~HGL--l~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHR-IPRGK--KKRPVVLLQHGL--LASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred eEEEEEEccCCeEEEEee-ecCCC--CCCCcEEEeecc--ccccccceecCccccHHHHHHHcCCceeeecCcCcccchh
Confidence 34444444444 33332 24332 799999999973 22222110 0112234444455999999998842
Q ss_pred -----CC--CCC------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCC
Q 020406 119 -----PE--NRL------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLEL 185 (326)
Q Consensus 119 -----~~--~~~------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~ 185 (326)
+. ..+ +-...|+-+.|+++.+... .+++..+|||.|+.....++... ..
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~-------------~~kl~yvGHSQGtt~~fv~lS~~---p~-- 184 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTG-------------QEKLHYVGHSQGTTTFFVMLSER---PE-- 184 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhcc-------------ccceEEEEEEccchhheehhccc---ch--
Confidence 11 111 1245688899999988753 38999999999999999888761 11
Q ss_pred CCcceeEEEEeccccCCc
Q 020406 186 APVRVKGYILLAPFFGGT 203 (326)
Q Consensus 186 ~~~~i~~~il~~p~~~~~ 203 (326)
...+|+..++++|.....
T Consensus 185 ~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 185 YNKKIKSFIALAPAAFPK 202 (403)
T ss_pred hhhhhheeeeecchhhhc
Confidence 226899999999987443
No 150
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.41 E-value=1.5e-06 Score=69.83 Aligned_cols=105 Identities=17% Similarity=0.122 Sum_probs=64.3
Q ss_pred eEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc------
Q 020406 51 VVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP------ 124 (326)
Q Consensus 51 v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~------ 124 (326)
+...++..+....|-.. ++.+--+.+-|+ .|.... .|++++. ++.+.||.|+..|||+.+++...
T Consensus 10 l~~~DG~~l~~~~~pA~----~~~~g~~~va~a---~Gv~~~-fYRrfA~-~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 10 LPAPDGYSLPGQRFPAD----GKASGRLVVAGA---TGVGQY-FYRRFAA-AAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccCCCccCccccccCC----CCCCCcEEeccc---CCcchh-HhHHHHH-HhhccCceEEEEecccccCCCccccccCc
Confidence 33444545666655322 233433444443 233221 1455554 44555999999999976554321
Q ss_pred -----hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 125 -----AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 125 -----~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
-...|...+++++++..+. -....+|||+||.+.-.+..+
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~~~-------------~P~y~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKALPG-------------HPLYFVGHSFGGQALGLLGQH 125 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhCCC-------------CceEEeeccccceeecccccC
Confidence 1356888899999986543 578999999999987665543
No 151
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.38 E-value=2.6e-06 Score=71.18 Aligned_cols=101 Identities=20% Similarity=0.192 Sum_probs=67.0
Q ss_pred cEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCC-CCCCchHHHHHHH-HHHHHHHHhhcCCCCccccc
Q 020406 75 PIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAP-ENRLPAAIEDGYM-AVKWLQAQAVANEPDTWLTE 152 (326)
Q Consensus 75 p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~-~~~~~~~~~d~~~-~~~~l~~~~~~~~~~~~~~~ 152 (326)
+.|+++|++|. +... |..++..+..+ .+.|+.++++... .......++++.+ .++.++...+
T Consensus 1 ~~lf~~p~~gG---~~~~--y~~la~~l~~~-~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~---------- 64 (229)
T PF00975_consen 1 RPLFCFPPAGG---SASS--YRPLARALPDD-VIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQP---------- 64 (229)
T ss_dssp -EEEEESSTTC---SGGG--GHHHHHHHTTT-EEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTS----------
T ss_pred CeEEEEcCCcc---CHHH--HHHHHHhCCCC-eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCC----------
Confidence 35899999853 3332 77888888765 5888888887653 2233344555443 3444444331
Q ss_pred ccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 153 VADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 153 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
..++.|+|||+||.+|..+|.+. .. ....+..++++++.
T Consensus 65 ---~gp~~L~G~S~Gg~lA~E~A~~L--e~---~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 65 ---EGPYVLAGWSFGGILAFEMARQL--EE---AGEEVSRLILIDSP 103 (229)
T ss_dssp ---SSSEEEEEETHHHHHHHHHHHHH--HH---TT-SESEEEEESCS
T ss_pred ---CCCeeehccCccHHHHHHHHHHH--HH---hhhccCceEEecCC
Confidence 14899999999999999999872 11 24678999999843
No 152
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.32 E-value=4.9e-05 Score=67.03 Aligned_cols=152 Identities=17% Similarity=0.063 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccC
Q 020406 127 IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRK 206 (326)
Q Consensus 127 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~ 206 (326)
.-|...|+.++++.....+ +.-+++.+|+|.||++|..+|.- .|..+.+++--|++.......
T Consensus 163 AiD~INAl~~l~k~~~~~~---------~~lp~I~~G~s~G~yla~l~~k~--------aP~~~~~~iDns~~~~p~l~~ 225 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNG---------GGLPKIYIGSSHGGYLAHLCAKI--------APWLFDGVIDNSSYALPPLRY 225 (403)
T ss_pred HHHHHHHHHHHHHhhhccc---------CCCcEEEEecCcHHHHHHHHHhh--------CccceeEEEecCccccchhhe
Confidence 4577778888887765532 22489999999999999999988 889999999988766443221
Q ss_pred C--ccccCCCcccC-CH---------HHHHHHHHhcCCCC--CCCCCC-ccCCCCCCCCCcccC--CCCcEEEEEcCcC-
Q 020406 207 K--SEAEGPREAFL-NL---------ELIDRFWRLSIPIG--ETTDHP-LINPFGPVSPSLEAV--DLDPILVVVGGSD- 268 (326)
Q Consensus 207 ~--~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~--~~~P~lii~G~~D- 268 (326)
- .+......... .. ...+.+|..-.... ...... .+..+....-..... ..+-.+..|+..|
T Consensus 226 I~Gre~~~~~y~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~ 305 (403)
T PF11144_consen 226 IFGREIDFMKYICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDD 305 (403)
T ss_pred eeeeecCcccccccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCC
Confidence 1 11110000000 00 00111222100000 000000 000000000000000 1224566799999
Q ss_pred -cchhhHHHHHHHHHHCCCcEEEEEeCC
Q 020406 269 -LLKDRAEDYAKTLKNFGKKVEYVEFEG 295 (326)
Q Consensus 269 -~~~~~~~~~~~~l~~~g~~~~l~~~~~ 295 (326)
.|.++-+++++.+++.|-+++++.+.+
T Consensus 306 ~~p~~~K~~l~~~l~~lgfda~l~lIkd 333 (403)
T PF11144_consen 306 LAPAEDKEELYEILKNLGFDATLHLIKD 333 (403)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecC
Confidence 778888999999999999999988833
No 153
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.31 E-value=2e-06 Score=58.66 Aligned_cols=56 Identities=23% Similarity=0.254 Sum_probs=43.7
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR 122 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~ 122 (326)
.+.++.|.|+.+ ++.+|+++||.+...+. |..++..|+.+ ||.|+++|+|+.+.+.
T Consensus 3 ~L~~~~w~p~~~---~k~~v~i~HG~~eh~~r-----y~~~a~~L~~~-G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 3 KLFYRRWKPENP---PKAVVVIVHGFGEHSGR-----YAHLAEFLAEQ-GYAVFAYDHRGHGRSE 58 (79)
T ss_pred EEEEEEecCCCC---CCEEEEEeCCcHHHHHH-----HHHHHHHHHhC-CCEEEEECCCcCCCCC
Confidence 467778888763 78999999986544332 77888888876 9999999999776553
No 154
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.29 E-value=8e-05 Score=64.94 Aligned_cols=202 Identities=12% Similarity=0.144 Sum_probs=117.6
Q ss_pred eEecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC-----C------
Q 020406 51 VVFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLA-----P------ 119 (326)
Q Consensus 51 v~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~-----~------ 119 (326)
+.+..++.-.+-+|.|... .....+||++||-|.. ..++.....+++-..++|+.++++..+.- +
T Consensus 65 ~~L~~~~~~flaL~~~~~~-~~~~G~vIilp~~g~~---~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~ 140 (310)
T PF12048_consen 65 QWLQAGEERFLALWRPANS-AKPQGAVIILPDWGEH---PDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEA 140 (310)
T ss_pred EEeecCCEEEEEEEecccC-CCCceEEEEecCCCCC---CCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCC
Confidence 4455566677778998764 5677899999986433 22212334445445566999998765530 0
Q ss_pred -------CCCC----------------------chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHH
Q 020406 120 -------ENRL----------------------PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNI 170 (326)
Q Consensus 120 -------~~~~----------------------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~ 170 (326)
.... .....-+..++.++.++. ..+++|+||+.|+.+
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~--------------~~~ivlIg~G~gA~~ 206 (310)
T PF12048_consen 141 EEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG--------------GKNIVLIGHGTGAGW 206 (310)
T ss_pred CCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC--------------CceEEEEEeChhHHH
Confidence 0000 011223444555555443 145999999999999
Q ss_pred HHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCCCC
Q 020406 171 AHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGETTDHPLINPFGPVSP 250 (326)
Q Consensus 171 a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (326)
++.+.... ....+.++|++++........ . .+.... .. .
T Consensus 207 ~~~~la~~-------~~~~~daLV~I~a~~p~~~~n-------------~-~l~~~l---------------a~----l- 245 (310)
T PF12048_consen 207 AARYLAEK-------PPPMPDALVLINAYWPQPDRN-------------P-ALAEQL---------------AQ----L- 245 (310)
T ss_pred HHHHHhcC-------CCcccCeEEEEeCCCCcchhh-------------h-hHHHHh---------------hc----c-
Confidence 99999872 335588999999865322210 0 010000 00 0
Q ss_pred CcccCCCCcEEEEEcCcCcchhhHHHHHHH-H-HH-CCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 251 SLEAVDLDPILVVVGGSDLLKDRAEDYAKT-L-KN-FGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 251 ~~~~~~~~P~lii~G~~D~~~~~~~~~~~~-l-~~-~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
..|+|=|++... .........++ + ++ ....++-..+.+..|.+. ...+.++++|..||+++
T Consensus 246 ------~iPvLDi~~~~~-~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~------~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 246 ------KIPVLDIYSADN-PASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPS------GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred ------CCCEEEEecCCC-hHHHHHHHHHHHHHHhccCCCceeEecCCCCCChh------hHHHHHHHHHHHHHHhh
Confidence 228988887773 32222222222 2 22 224567777888777443 23345999999999876
No 155
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.27 E-value=5.1e-06 Score=76.37 Aligned_cols=122 Identities=20% Similarity=0.243 Sum_probs=76.7
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC--------------C
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR--------------L 123 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~--------------~ 123 (326)
...-++|.-...-++..|++|++-|-|-. .... ....++..+|.+.|-.++..++|..+++. .
T Consensus 13 tf~qRY~~n~~~~~~~gpifl~~ggE~~~-~~~~--~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~ 89 (434)
T PF05577_consen 13 TFSQRYWVNDQYYKPGGPIFLYIGGEGPI-EPFW--INNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTS 89 (434)
T ss_dssp EEEEEEEEE-TT--TTSEEEEEE--SS-H-HHHH--HH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SH
T ss_pred eEEEEEEEEhhhcCCCCCEEEEECCCCcc-chhh--hcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCH
Confidence 34555555443323347888888442211 1111 12346788999999999999999654432 2
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 124 PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 124 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
.+.++|+...+++++..... .+..+++++|.|+||.+|+++-.+ +|+.+.|+++.|+.+
T Consensus 90 ~QALaD~a~F~~~~~~~~~~----------~~~~pwI~~GgSY~G~Laaw~r~k--------yP~~~~ga~ASSapv 148 (434)
T PF05577_consen 90 EQALADLAYFIRYVKKKYNT----------APNSPWIVFGGSYGGALAAWFRLK--------YPHLFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTT----------GCC--EEEEEETHHHHHHHHHHHH---------TTT-SEEEEET--C
T ss_pred HHHHHHHHHHHHHHHHhhcC----------CCCCCEEEECCcchhHHHHHHHhh--------CCCeeEEEEecccee
Confidence 45789999999999865421 233689999999999999999999 999999999988754
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.26 E-value=1.5e-05 Score=72.62 Aligned_cols=171 Identities=16% Similarity=0.158 Sum_probs=91.7
Q ss_pred CCcEEEEEcCCcc-ccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC-CCCCCchHHHHHHHHHHHHHHHhhcCCCCccc
Q 020406 73 KLPIFYYIHGGGF-CIGSRTWPNCQNYCFKLASELQAVIISPDYRLA-PENRLPAAIEDGYMAVKWLQAQAVANEPDTWL 150 (326)
Q Consensus 73 ~~p~vv~~HGgg~-~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 150 (326)
..|+++++||++- ..++.+++.|...+. +..+ -.-|..+|++.. ++.+.....+-+..+.++...+.. +
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~ls-l~ge-vvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~--g----- 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLS-LKGE-VVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEIT--G----- 245 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHh-hhce-eeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhh--c-----
Confidence 4589999999872 222333222222222 1112 245556676633 223332333333333333222211 1
Q ss_pred ccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec-cccCCcccCCccccCCCcccCCHHHHHHHHHh
Q 020406 151 TEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA-PFFGGTVRKKSEAEGPREAFLNLELIDRFWRL 229 (326)
Q Consensus 151 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (326)
......|+|+|+|||+.++.+..... ....+.++|.+. |........
T Consensus 246 --efpha~IiLvGrsmGAlVachVSpsn-------sdv~V~~vVCigypl~~vdgpr----------------------- 293 (784)
T KOG3253|consen 246 --EFPHAPIILVGRSMGALVACHVSPSN-------SDVEVDAVVCIGYPLDTVDGPR----------------------- 293 (784)
T ss_pred --cCCCCceEEEecccCceeeEEecccc-------CCceEEEEEEecccccCCCccc-----------------------
Confidence 23447899999999987777776441 223477777664 321111000
Q ss_pred cCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecC
Q 020406 230 SIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTID 304 (326)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~ 304 (326)
...++.... -..|+|++.|.+| +....-+++.+++++ +++++++.+++|.+....
T Consensus 294 -----girDE~Lld------------mk~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 294 -----GIRDEALLD------------MKQPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMAIPK 350 (784)
T ss_pred -----CCcchhhHh------------cCCceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCccccCCc
Confidence 000000000 0339999999999 445556667777765 468999999999887654
No 157
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.25 E-value=2.4e-05 Score=67.84 Aligned_cols=131 Identities=19% Similarity=0.175 Sum_probs=79.1
Q ss_pred CCCceeeeeEecCCCC-----eEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcc-----hhHHHHHhh------cC
Q 020406 43 DGSVVWKDVVFDPVHD-----LSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNC-----QNYCFKLAS------EL 106 (326)
Q Consensus 43 ~~~~~~~~v~~~~~~~-----~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~-----~~~~~~la~------~~ 106 (326)
......+.+++.+|.- +.+..|.-- ...+..+|+++||- .|+...... ..+...+.. -.
T Consensus 17 ~~~~~~~~l~le~G~~l~~~~vay~T~Gtl--n~~~~NaVli~HaL---tG~~h~~~~~~~~~~GWW~~liGpG~~iDt~ 91 (368)
T COG2021 17 VGLFAIGPLTLESGGVLSDARVAYETYGTL--NAEKDNAVLICHAL---TGDSHAAGTADDGEKGWWDDLIGPGKPIDTE 91 (368)
T ss_pred cceeccCceeecCCCcccCcEEEEEecccc--cccCCceEEEeccc---cCcccccccCCCCCCccHHHhcCCCCCCCcc
Confidence 4444556667776653 222223211 23567899999964 232211000 012232321 22
Q ss_pred CcEEEeecCCCCC-----------C-----CCCc-hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEE-EeecChhH
Q 020406 107 QAVIISPDYRLAP-----------E-----NRLP-AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVF-ISGDSAGG 168 (326)
Q Consensus 107 g~~vi~~d~r~~~-----------~-----~~~~-~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~-l~G~S~GG 168 (326)
.|-||+.|--+++ . ..|| -.+.|+..+-+.|.+.. ..+++. |+|.||||
T Consensus 92 r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~L-------------GI~~l~avvGgSmGG 158 (368)
T COG2021 92 RFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDAL-------------GIKKLAAVVGGSMGG 158 (368)
T ss_pred ceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhc-------------CcceEeeeeccChHH
Confidence 5888988865432 1 1233 35677777776666653 346776 99999999
Q ss_pred HHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 169 NIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 169 ~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
+.|+..+.. +|+++..+|.++..
T Consensus 159 MqaleWa~~--------yPd~V~~~i~ia~~ 181 (368)
T COG2021 159 MQALEWAIR--------YPDRVRRAIPIATA 181 (368)
T ss_pred HHHHHHHHh--------ChHHHhhhheeccc
Confidence 999999998 89999999888763
No 158
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.23 E-value=1.9e-05 Score=69.58 Aligned_cols=211 Identities=14% Similarity=0.136 Sum_probs=123.4
Q ss_pred EEEEEccCCCCCCCCcEEEEEcCCc---cccCCCCCCcchhHHHHHhhcCCcEEEeecC--------CCCCCCC------
Q 020406 60 SLRLYKPALPVSTKLPIFYYIHGGG---FCIGSRTWPNCQNYCFKLASELQAVIISPDY--------RLAPENR------ 122 (326)
Q Consensus 60 ~~~~~~P~~~~~~~~p~vv~~HGgg---~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~--------r~~~~~~------ 122 (326)
.+.|+.|.. ......++|++-||. +...... .....+..+|...|.+|+.+.. ...+...
T Consensus 51 ~l~I~vP~~-~~~~~~all~i~gG~~~~~~~~~~~--~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iI 127 (367)
T PF10142_consen 51 WLTIYVPKN-DKNPDTALLFITGGSNRNWPGPPPD--FDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAII 127 (367)
T ss_pred EEEEEECCC-CCCCceEEEEEECCcccCCCCCCCc--chHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHH
Confidence 467889987 246778999999985 2211111 2456788899888887776532 1111111
Q ss_pred --------------Cc---hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCC
Q 020406 123 --------------LP---AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLEL 185 (326)
Q Consensus 123 --------------~~---~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~ 185 (326)
.+ -+..-+..+++-+.+..+... +++.++.+|.|.|==|+.+-..|+.+
T Consensus 128 AytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~-------~~~i~~FvV~GaSKRGWTtWltaa~D------- 193 (367)
T PF10142_consen 128 AYTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKF-------GVNIEKFVVTGASKRGWTTWLTAAVD------- 193 (367)
T ss_pred HHHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhc-------CCCccEEEEeCCchHhHHHHHhhccC-------
Confidence 00 123344445554444433211 46789999999999999998887652
Q ss_pred CCcceeEEEEec-cccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCC--------------------CCCCCCccCC
Q 020406 186 APVRVKGYILLA-PFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIG--------------------ETTDHPLINP 244 (326)
Q Consensus 186 ~~~~i~~~il~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~ 244 (326)
++|++++-+. +.++.... +...++.+.+.- .......++|
T Consensus 194 --~RV~aivP~Vid~LN~~~~-----------------l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP 254 (367)
T PF10142_consen 194 --PRVKAIVPIVIDVLNMKAN-----------------LEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDP 254 (367)
T ss_pred --cceeEEeeEEEccCCcHHH-----------------HHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCH
Confidence 7777777443 33322211 111111111000 0000112444
Q ss_pred CCCCCCCcccCCCCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 245 FGPVSPSLEAVDLDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 245 ~~~~~~~~~~~~~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
+...... .-|.||+.|..| -.++.+.-+.+.|+. +..+..+|+++|.... .++...+..|++
T Consensus 255 ~~Y~~rL-----~~PK~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~vPN~~H~~~~--------~~~~~~l~~f~~ 318 (367)
T PF10142_consen 255 YSYRDRL-----TMPKYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYVPNAGHSLIG--------SDVVQSLRAFYN 318 (367)
T ss_pred HHHHHhc-----CccEEEEecCCCceeccCchHHHHhhCCC---CeeEEeCCCCCcccch--------HHHHHHHHHHHH
Confidence 4333222 339999999999 457788889999874 4589999999997653 455555666553
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.22 E-value=2.3e-05 Score=66.08 Aligned_cols=60 Identities=20% Similarity=0.235 Sum_probs=52.3
Q ss_pred CcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHh
Q 020406 258 DPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFI 321 (326)
Q Consensus 258 ~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl 321 (326)
+|-+++.++.| ++.++.+++++..++.|.+++...+++..|.-++.. +++++.+.+.+|+
T Consensus 179 ~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~----~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 179 CPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRK----HPDRYWRAVDEFW 240 (240)
T ss_pred CCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhccc----CHHHHHHHHHhhC
Confidence 49999999999 667788999999999999999999999999776543 6789999988875
No 160
>COG3150 Predicted esterase [General function prediction only]
Probab=98.20 E-value=5e-05 Score=58.11 Aligned_cols=123 Identities=19% Similarity=0.218 Sum_probs=64.5
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcc------cCCHHHHHHHHHhc
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREA------FLNLELIDRFWRLS 230 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 230 (326)
+...|+|.|+||+.|.+++.+ --+++ |+++|.+............+..+ .+....+....
T Consensus 59 ~~p~ivGssLGGY~At~l~~~----------~Gira-v~~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~l~--- 124 (191)
T COG3150 59 ESPLIVGSSLGGYYATWLGFL----------CGIRA-VVFNPAVRPYELLTGYLGRPENPYTGQEYVLESRHIATLC--- 124 (191)
T ss_pred CCceEEeecchHHHHHHHHHH----------hCChh-hhcCCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHHHH---
Confidence 349999999999999999987 33443 45566554433211111111100 01111111110
Q ss_pred CCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCc-CcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHH
Q 020406 231 IPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGS-DLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSED 309 (326)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~-D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~ 309 (326)
...+..+..|.-+++.... |...+ .++....+. .+...+++|+.|.|.-
T Consensus 125 ------------------~~~~~~l~~p~~~~lL~qtgDEvLD-yr~a~a~y~----~~~~~V~dgg~H~F~~------- 174 (191)
T COG3150 125 ------------------VLQFRELNRPRCLVLLSQTGDEVLD-YRQAVAYYH----PCYEIVWDGGDHKFKG------- 174 (191)
T ss_pred ------------------HhhccccCCCcEEEeecccccHHHH-HHHHHHHhh----hhhheeecCCCccccc-------
Confidence 0011112233444444444 84443 233333333 3478889999998874
Q ss_pred HHHHHHHHHHHhhh
Q 020406 310 ANRLMQIIKHFIAE 323 (326)
Q Consensus 310 ~~~~~~~~~~fl~~ 323 (326)
....+..|..|..-
T Consensus 175 f~~~l~~i~aF~gl 188 (191)
T COG3150 175 FSRHLQRIKAFKGL 188 (191)
T ss_pred hHHhHHHHHHHhcc
Confidence 45778888888753
No 161
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.12 E-value=1.1e-05 Score=66.11 Aligned_cols=82 Identities=20% Similarity=0.158 Sum_probs=47.0
Q ss_pred EEEEcCCccccCCCCCCcchhHHHHHhhcCCcE---EEeecCCCCCCCCCch-------HHHHHHHHHHHHHHHhhcCCC
Q 020406 77 FYYIHGGGFCIGSRTWPNCQNYCFKLASELQAV---IISPDYRLAPENRLPA-------AIEDGYMAVKWLQAQAVANEP 146 (326)
Q Consensus 77 vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~---vi~~d~r~~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~ 146 (326)
|||+||.+- .... .|..+...|.++ ||. +++++|.......... ...++.+.++-+++.
T Consensus 4 VVlVHG~~~--~~~~--~w~~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~------ 72 (219)
T PF01674_consen 4 VVLVHGTGG--NAYS--NWSTLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAY------ 72 (219)
T ss_dssp EEEE--TTT--TTCG--GCCHHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHH------
T ss_pred EEEECCCCc--chhh--CHHHHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHh------
Confidence 899998531 1222 366777777776 999 7999997554322221 223455555555544
Q ss_pred CcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 147 DTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 147 ~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
... +|-|+||||||.++..+...
T Consensus 73 -------TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 73 -------TGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -------HT---EEEEEETCHHHHHHHHHHH
T ss_pred -------hCC-EEEEEEcCCcCHHHHHHHHH
Confidence 334 99999999999999888765
No 162
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.01 E-value=3.2e-05 Score=64.61 Aligned_cols=111 Identities=16% Similarity=0.121 Sum_probs=62.3
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCc--EEEeecCCCCCC-CCCch-------HHHHHHHHHHHHHHHh
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQA--VIISPDYRLAPE-NRLPA-------AIEDGYMAVKWLQAQA 141 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~--~vi~~d~r~~~~-~~~~~-------~~~d~~~~~~~l~~~~ 141 (326)
..+.++||+||....... -...+.++....++ .++.+.++..+. ..|.. ...+....++.|.+.
T Consensus 16 ~~~~vlvfVHGyn~~f~~-----a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~- 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFED-----ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA- 89 (233)
T ss_pred CCCeEEEEEeCCCCCHHH-----HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc-
Confidence 467899999964221111 11233445544444 566667664332 11211 112222233333322
Q ss_pred hcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCC---CCcceeEEEEeccccCC
Q 020406 142 VANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLEL---APVRVKGYILLAPFFGG 202 (326)
Q Consensus 142 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~---~~~~i~~~il~~p~~~~ 202 (326)
....+|.|++||||+.+.+.+.... ..... ...++..+++.+|-++.
T Consensus 90 ------------~~~~~I~ilaHSMG~rv~~~aL~~l--~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 90 ------------PGIKRIHILAHSMGNRVLLEALRQL--ASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred ------------cCCceEEEEEeCchHHHHHHHHHHH--HhcccchhhHhhhheEEEECCCCCH
Confidence 2348999999999999999987762 22211 12478899999986643
No 163
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.99 E-value=0.00067 Score=59.97 Aligned_cols=85 Identities=16% Similarity=0.112 Sum_probs=59.1
Q ss_pred hHHHHHhhcCCcEEEeecCCCCCC----CCCchHH-HHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHH
Q 020406 97 NYCFKLASELQAVIISPDYRLAPE----NRLPAAI-EDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIA 171 (326)
Q Consensus 97 ~~~~~la~~~g~~vi~~d~r~~~~----~~~~~~~-~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a 171 (326)
.++.-+ .+.|..|+.++.+.... ..+.+.+ +++..+++.+++.... ++|.++|+|.||.++
T Consensus 130 s~V~~l-~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~-------------~~InliGyCvGGtl~ 195 (445)
T COG3243 130 SLVRWL-LEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQ-------------KDINLIGYCVGGTLL 195 (445)
T ss_pred cHHHHH-HHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCc-------------cccceeeEecchHHH
Confidence 344444 45599999999875332 2233333 5666777777776533 799999999999999
Q ss_pred HHHHHHHHhCCCCCCCc-ceeEEEEeccccCCc
Q 020406 172 HNLAVRLKAGSLELAPV-RVKGYILLAPFFGGT 203 (326)
Q Consensus 172 ~~~a~~~~~~~~~~~~~-~i~~~il~~p~~~~~ 203 (326)
..+++. .+. +|+.+.++....|..
T Consensus 196 ~~ala~--------~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 196 AAALAL--------MAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred HHHHHh--------hhhcccccceeeecchhhc
Confidence 998887 333 488888887665544
No 164
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.96 E-value=3.8e-05 Score=66.26 Aligned_cols=113 Identities=12% Similarity=0.128 Sum_probs=68.7
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCc--EEEeecCCCCC--------CCCCchHHHHHHHHHHHHHHHh
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQA--VIISPDYRLAP--------ENRLPAAIEDGYMAVKWLQAQA 141 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~--~vi~~d~r~~~--------~~~~~~~~~d~~~~~~~l~~~~ 141 (326)
..+-++||+||-++.... --....+++...|+ ..+.+..+..+ .......-.+++..+++|.+..
T Consensus 114 ~~k~vlvFvHGfNntf~d-----av~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 114 SAKTVLVFVHGFNNTFED-----AVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CCCeEEEEEcccCCchhH-----HHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC
Confidence 456799999975433221 11223344444443 22333333211 1112334567778888888765
Q ss_pred hcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC
Q 020406 142 VANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 142 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~ 202 (326)
. ..+|.|++||||.++++.++.+........-+.+|+-+|+.+|=.|.
T Consensus 189 ~-------------~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 189 P-------------VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred C-------------CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 3 27999999999999999998873222222235789999999986554
No 165
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.94 E-value=0.0042 Score=51.38 Aligned_cols=177 Identities=19% Similarity=0.147 Sum_probs=95.0
Q ss_pred EEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHH----HHHHHHHHhhcCCCCcccc
Q 020406 76 IFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYM----AVKWLQAQAVANEPDTWLT 151 (326)
Q Consensus 76 ~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~----~~~~l~~~~~~~~~~~~~~ 151 (326)
.||.+=||.|...... ..|..++..|+.+ ||.|++.-|... ...-....++.. +++.+.+..
T Consensus 18 gvihFiGGaf~ga~P~-itYr~lLe~La~~-Gy~ViAtPy~~t--fDH~~~A~~~~~~f~~~~~~L~~~~---------- 83 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQ-ITYRYLLERLADR-GYAVIATPYVVT--FDHQAIAREVWERFERCLRALQKRG---------- 83 (250)
T ss_pred EEEEEcCcceeccCcH-HHHHHHHHHHHhC-CcEEEEEecCCC--CcHHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 5777778888655443 3588899999987 999999988653 222233333333 333333332
Q ss_pred cccCC--CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec----cccCCcccCCccccCCCcccC-CHHHHH
Q 020406 152 EVADF--GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA----PFFGGTVRKKSEAEGPREAFL-NLELID 224 (326)
Q Consensus 152 ~~~d~--~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~----p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 224 (326)
..+. -+++=+|||+|.-+-+.+... ....-++-++++ ++.+...............+. ++....
T Consensus 84 -~~~~~~lP~~~vGHSlGcklhlLi~s~--------~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET~ 154 (250)
T PF07082_consen 84 -GLDPAYLPVYGVGHSLGCKLHLLIGSL--------FDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPSPEETR 154 (250)
T ss_pred -CCCcccCCeeeeecccchHHHHHHhhh--------ccCcccceEEEecCChHHHhhCchHhhhccccccCccCCHHHHH
Confidence 1222 257779999999998887765 222334445444 111111100000000001111 112222
Q ss_pred HHHHhcCCCCCCCCCCccCCCCCCCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCC-CcEEEEEeCCCceeee
Q 020406 225 RFWRLSIPIGETTDHPLINPFGPVSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFG-KKVEYVEFEGKQHGFF 301 (326)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g-~~~~l~~~~~~~H~~~ 301 (326)
.+.+..+. .+.+++|-=.+|.. +++..+.+.|+... .-++....+| .|...
T Consensus 155 ~li~~~Y~------------------------~~rnLLIkF~~D~i-Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTP 206 (250)
T PF07082_consen 155 RLIRESYQ------------------------VRRNLLIKFNDDDI-DQTDELEQILQQRFPDMVSIQTLPG-NHLTP 206 (250)
T ss_pred HHHHHhcC------------------------CccceEEEecCCCc-cchHHHHHHHhhhccccceEEeCCC-CCCCc
Confidence 22222111 33567777677755 68888888887653 3357778886 79544
No 166
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.94 E-value=0.00024 Score=60.10 Aligned_cols=220 Identities=18% Similarity=0.142 Sum_probs=116.6
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCC-CCCCcchhHHHHHhhcCCcEEEeecCCCCCCC--CCc-----hHHHH
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGS-RTWPNCQNYCFKLASELQAVIISPDYRLAPEN--RLP-----AAIED 129 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~-~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~--~~~-----~~~~d 129 (326)
.+.+.++-.. ++++|+||-.|-=|-..-+ -......+-+..+.. .+.++-+|.++..+. .+| -.+++
T Consensus 10 ~v~V~v~G~~---~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~ 84 (283)
T PF03096_consen 10 SVHVTVQGDP---KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ--NFCIYHIDAPGQEEGAATLPEGYQYPSMDQ 84 (283)
T ss_dssp EEEEEEESS-----TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT--TSEEEEEE-TTTSTT-----TT-----HHH
T ss_pred EEEEEEEecC---CCCCceEEEeccccccchHHHHHHhcchhHHHHhh--ceEEEEEeCCCCCCCcccccccccccCHHH
Confidence 4777776433 2479999999964321100 000000122444444 589999998854321 111 13566
Q ss_pred HHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCccc----
Q 020406 130 GYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVR---- 205 (326)
Q Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~---- 205 (326)
+.+.+..+.++. ..+.++-+|--+|+++-+.+|.. +|+++.|+||++|......-
T Consensus 85 LAe~l~~Vl~~f-------------~lk~vIg~GvGAGAnIL~rfAl~--------~p~~V~GLiLvn~~~~~~gw~Ew~ 143 (283)
T PF03096_consen 85 LAEMLPEVLDHF-------------GLKSVIGFGVGAGANILARFALK--------HPERVLGLILVNPTCTAAGWMEWF 143 (283)
T ss_dssp HHCTHHHHHHHH-------------T---EEEEEETHHHHHHHHHHHH--------SGGGEEEEEEES---S---HHHHH
T ss_pred HHHHHHHHHHhC-------------CccEEEEEeeccchhhhhhcccc--------CccceeEEEEEecCCCCccHHHHH
Confidence 666666666654 23689999999999999999999 99999999999985422100
Q ss_pred --------------CCcccc------CCC-----------------cccCCHHHHHHHHHhcCCCCCCCCCCccCCCCCC
Q 020406 206 --------------KKSEAE------GPR-----------------EAFLNLELIDRFWRLSIPIGETTDHPLINPFGPV 248 (326)
Q Consensus 206 --------------~~~~~~------~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (326)
.....+ +.. ....++..+..++..+.... .+...
T Consensus 144 ~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~---------DL~~~ 214 (283)
T PF03096_consen 144 YQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRT---------DLSIE 214 (283)
T ss_dssp HHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT--------------SE
T ss_pred HHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccc---------cchhh
Confidence 000000 000 00111122222233222111 00000
Q ss_pred CCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 249 SPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 249 ~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
.. ...+|+|++.|++-+..+.+.++..+|.. ...++..++++|=.. ..+++..+.+.+.=||+.
T Consensus 215 ~~----~~~c~vLlvvG~~Sp~~~~vv~~ns~Ldp--~~ttllkv~dcGglV-----~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 215 RP----SLGCPVLLVVGDNSPHVDDVVEMNSKLDP--TKTTLLKVADCGGLV-----LEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp CT----TCCS-EEEEEETTSTTHHHHHHHHHHS-C--CCEEEEEETT-TT-H-----HHH-HHHHHHHHHHHHHH
T ss_pred cC----CCCCCeEEEEecCCcchhhHHHHHhhcCc--ccceEEEecccCCcc-----cccCcHHHHHHHHHHHcc
Confidence 00 01259999999999999999999999853 467899999885422 236788888888888865
No 167
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.94 E-value=0.0033 Score=57.14 Aligned_cols=111 Identities=25% Similarity=0.219 Sum_probs=67.0
Q ss_pred EEEEccCCC--CCCCCcEEEEE----cCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHH
Q 020406 61 LRLYKPALP--VSTKLPIFYYI----HGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAV 134 (326)
Q Consensus 61 ~~~~~P~~~--~~~~~p~vv~~----HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~ 134 (326)
++|..|.+. ...++|.||+= ||-| +.|-+. ..+. ..|-+.|..|+.+.+.-.|.. -+.++|+..+.
T Consensus 54 lrI~pp~~~~~d~~krP~vViDPRAGHGpG-IGGFK~---dSev--G~AL~~GHPvYFV~F~p~P~p--gQTl~DV~~ae 125 (581)
T PF11339_consen 54 LRITPPEGVPVDPTKRPFVVIDPRAGHGPG-IGGFKP---DSEV--GVALRAGHPVYFVGFFPEPEP--GQTLEDVMRAE 125 (581)
T ss_pred EEeECCCCCCCCCCCCCeEEeCCCCCCCCC-ccCCCc---ccHH--HHHHHcCCCeEEEEecCCCCC--CCcHHHHHHHH
Confidence 445555543 45678888774 5521 222222 2232 334455888888877655542 23677776655
Q ss_pred H-HHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEe
Q 020406 135 K-WLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILL 196 (326)
Q Consensus 135 ~-~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~ 196 (326)
. |+.+.... .-+..+.+|+|-+.||+.++++|+. .|+.+.-+|+.
T Consensus 126 ~~Fv~~V~~~---------hp~~~kp~liGnCQgGWa~~mlAA~--------~Pd~~gplvla 171 (581)
T PF11339_consen 126 AAFVEEVAER---------HPDAPKPNLIGNCQGGWAAMMLAAL--------RPDLVGPLVLA 171 (581)
T ss_pred HHHHHHHHHh---------CCCCCCceEEeccHHHHHHHHHHhc--------CcCccCceeec
Confidence 4 33332221 1233489999999999999999998 67776666654
No 168
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.83 E-value=0.0038 Score=52.57 Aligned_cols=223 Identities=16% Similarity=0.076 Sum_probs=128.2
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCC-CCCcchhHHHHHhhcCCcEEEeecCCCCC--------CCCCchHHH
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSR-TWPNCQNYCFKLASELQAVIISPDYRLAP--------ENRLPAAIE 128 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~-~~~~~~~~~~~la~~~g~~vi~~d~r~~~--------~~~~~~~~~ 128 (326)
.+++.+|--.. +++|+||-.|.=|-...+. ......+-+..+..+ +.++-+|-++.. ++.+| .++
T Consensus 33 ~v~V~V~Gd~~---~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~--fcv~HV~~PGqe~gAp~~p~~y~yP-smd 106 (326)
T KOG2931|consen 33 VVHVTVYGDPK---GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH--FCVYHVDAPGQEDGAPSFPEGYPYP-SMD 106 (326)
T ss_pred cEEEEEecCCC---CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh--eEEEecCCCccccCCccCCCCCCCC-CHH
Confidence 57887775432 4789999999754321110 000012234555544 888888876321 11232 356
Q ss_pred HHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCc-----
Q 020406 129 DGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGT----- 203 (326)
Q Consensus 129 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~----- 203 (326)
|+.+.+-.+.+.. ...-|+=+|--+|+++-..+|+. +|+++.|+||+++.....
T Consensus 107 ~LAd~l~~VL~~f-------------~lk~vIg~GvGAGAyIL~rFAl~--------hp~rV~GLvLIn~~~~a~gwiew 165 (326)
T KOG2931|consen 107 DLADMLPEVLDHF-------------GLKSVIGMGVGAGAYILARFALN--------HPERVLGLVLINCDPCAKGWIEW 165 (326)
T ss_pred HHHHHHHHHHHhc-------------CcceEEEecccccHHHHHHHHhc--------ChhheeEEEEEecCCCCchHHHH
Confidence 7777777776653 23679999999999999999999 999999999998633111
Q ss_pred -ccCC------------------------ccccCCC-----------cccCCHHHHHHHHHhcCCCCCCCCCCccCCCCC
Q 020406 204 -VRKK------------------------SEAEGPR-----------EAFLNLELIDRFWRLSIPIGETTDHPLINPFGP 247 (326)
Q Consensus 204 -~~~~------------------------~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (326)
.... .+..... ....++..+..++..|..... -......+. .
T Consensus 166 ~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~D-L~~~r~~~~-~ 243 (326)
T KOG2931|consen 166 AYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRD-LSIERPKLG-T 243 (326)
T ss_pred HHHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCC-ccccCCCcC-c
Confidence 0000 0000000 001122223333333322110 000000000 0
Q ss_pred CCCCcccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 248 VSPSLEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 248 ~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
.. .+|+|++.|++-+.++...++..+|... ...+..+.+++=... .+++..+.+.+.=|++.
T Consensus 244 --tl-----kc~vllvvGd~Sp~~~~vv~~n~~Ldp~--~ttllk~~d~g~l~~-----e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 244 --TL-----KCPVLLVVGDNSPHVSAVVECNSKLDPT--YTTLLKMADCGGLVQ-----EEQPGKLAEAFKYFLQG 305 (326)
T ss_pred --cc-----cccEEEEecCCCchhhhhhhhhcccCcc--cceEEEEcccCCccc-----ccCchHHHHHHHHHHcc
Confidence 11 3599999999999998888888888543 457888888766332 24567778888878764
No 169
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.81 E-value=0.00035 Score=60.31 Aligned_cols=63 Identities=19% Similarity=0.260 Sum_probs=49.3
Q ss_pred CcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 258 DPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 258 ~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
.|+|++||++| ++...+..+.+..+.. +.+..++++++|..... ..+..++.+..+.+|+.++
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYD--NPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccC--ccHHHHHHHHHHHHHHHHh
Confidence 49999999999 7777888888887664 56889999999966532 2244568999999999875
No 170
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.80 E-value=0.0017 Score=52.34 Aligned_cols=90 Identities=17% Similarity=0.126 Sum_probs=64.2
Q ss_pred chhHHHHHhhcCCcEEEeecCCCCC----CCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHH
Q 020406 95 CQNYCFKLASELQAVIISPDYRLAP----ENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNI 170 (326)
Q Consensus 95 ~~~~~~~la~~~g~~vi~~d~r~~~----~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~ 170 (326)
|...+...+.+.++..+.+-.+.++ .....+..+|+..+++++.... ....|+++|||-|-.-
T Consensus 54 y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~-------------fSt~vVL~GhSTGcQd 120 (299)
T KOG4840|consen 54 YTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCG-------------FSTDVVLVGHSTGCQD 120 (299)
T ss_pred cHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccC-------------cccceEEEecCccchH
Confidence 4444444555669999998877554 3445566777777777665432 2258999999999999
Q ss_pred HHHHHHHHHhCCCCCCCcceeEEEEeccccCCc
Q 020406 171 AHNLAVRLKAGSLELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 171 a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~ 203 (326)
.+.+.... ..+..+.++|+.+|+.|..
T Consensus 121 i~yYlTnt------~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 121 IMYYLTNT------TKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred HHHHHHhc------cchHHHHHHHHhCccchhh
Confidence 99888551 1346788999999998766
No 171
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.78 E-value=0.0041 Score=51.06 Aligned_cols=105 Identities=16% Similarity=0.221 Sum_probs=65.7
Q ss_pred CCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCC--cEEEeec---CCCCC-------CCCCc---hHHHHHHHHHH
Q 020406 71 STKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQ--AVIISPD---YRLAP-------ENRLP---AAIEDGYMAVK 135 (326)
Q Consensus 71 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g--~~vi~~d---~r~~~-------~~~~~---~~~~d~~~~~~ 135 (326)
...++.|+++.|. .|.... |.+++..|....+ ..+..+. +.+.| ..... .-.+.+..-++
T Consensus 26 ~~~~~li~~IpGN---PG~~gF--Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKla 100 (301)
T KOG3975|consen 26 GEDKPLIVWIPGN---PGLLGF--YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLA 100 (301)
T ss_pred CCCceEEEEecCC---CCchhH--HHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHH
Confidence 3677999999987 454443 8888888887655 2333333 22222 11100 12334566788
Q ss_pred HHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 136 WLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 136 ~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
++++..+. ..+++++|||-|+++.+.+... .. ..-.+..++++-|
T Consensus 101 Fik~~~Pk------------~~ki~iiGHSiGaYm~Lqil~~---~k---~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 101 FIKEYVPK------------DRKIYIIGHSIGAYMVLQILPS---IK---LVFSVQKAVLLFP 145 (301)
T ss_pred HHHHhCCC------------CCEEEEEecchhHHHHHHHhhh---cc---cccceEEEEEecc
Confidence 88887643 2699999999999999999864 11 1234555555555
No 172
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.71 E-value=0.00014 Score=66.15 Aligned_cols=90 Identities=18% Similarity=0.111 Sum_probs=56.5
Q ss_pred chhHHHHHhhcCCcEEEeecCCCCCCC-----CCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHH
Q 020406 95 CQNYCFKLASELQAVIISPDYRLAPEN-----RLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGN 169 (326)
Q Consensus 95 ~~~~~~~la~~~g~~vi~~d~r~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~ 169 (326)
|..++..|... ||.+ ..|.++.|-. .....++++...++.+.+.. +..+++|+||||||.
T Consensus 110 ~~~li~~L~~~-GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~-------------g~~kV~LVGHSMGGl 174 (440)
T PLN02733 110 FHDMIEQLIKW-GYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKAS-------------GGKKVNIISHSMGGL 174 (440)
T ss_pred HHHHHHHHHHc-CCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHc-------------CCCCEEEEEECHhHH
Confidence 55667777654 8765 5565544321 12234455555666555442 237899999999999
Q ss_pred HHHHHHHHHHhCCCCCCCcceeEEEEeccccCCc
Q 020406 170 IAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 170 ~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~ 203 (326)
+++.++.. .. +.....|+.+|++++.+...
T Consensus 175 va~~fl~~---~p-~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 175 LVKCFMSL---HS-DVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHH---CC-HhHHhHhccEEEECCCCCCC
Confidence 99998876 11 11124588999988766544
No 173
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.59 E-value=0.00048 Score=57.94 Aligned_cols=102 Identities=20% Similarity=0.141 Sum_probs=65.6
Q ss_pred cEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCC-CCCchHHHHHHH-HHHHHHHHhhcCCCCccccc
Q 020406 75 PIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPE-NRLPAAIEDGYM-AVKWLQAQAVANEPDTWLTE 152 (326)
Q Consensus 75 p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~-~~~~~~~~d~~~-~~~~l~~~~~~~~~~~~~~~ 152 (326)
|.+.++||++ |.... |..+...+... ..|+..+.+.... ......++|+.+ .++-+++..+.
T Consensus 1 ~pLF~fhp~~---G~~~~--~~~L~~~l~~~--~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~--------- 64 (257)
T COG3319 1 PPLFCFHPAG---GSVLA--YAPLAAALGPL--LPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQPE--------- 64 (257)
T ss_pred CCEEEEcCCC---CcHHH--HHHHHHHhccC--ceeeccccCcccccccccCCHHHHHHHHHHHHHHhCCC---------
Confidence 5689999863 33221 55556666544 7788888886532 122233444433 44455554433
Q ss_pred ccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 153 VADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 153 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
..+.+.|+|+||.+|..+|.+. .. ....+..++++.+...
T Consensus 65 ----GPy~L~G~S~GG~vA~evA~qL--~~---~G~~Va~L~llD~~~~ 104 (257)
T COG3319 65 ----GPYVLLGWSLGGAVAFEVAAQL--EA---QGEEVAFLGLLDAVPP 104 (257)
T ss_pred ----CCEEEEeeccccHHHHHHHHHH--Hh---CCCeEEEEEEeccCCC
Confidence 5899999999999999999872 11 2367888888886655
No 174
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.57 E-value=0.00039 Score=60.95 Aligned_cols=86 Identities=24% Similarity=0.339 Sum_probs=67.0
Q ss_pred hhHHHHHhhcCCcEEEeecCCCCCCCC-----------------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCc
Q 020406 96 QNYCFKLASELQAVIISPDYRLAPENR-----------------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGK 158 (326)
Q Consensus 96 ~~~~~~la~~~g~~vi~~d~r~~~~~~-----------------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~ 158 (326)
..++..+|.+.+..++.+++|..+++. ..+.++|.+..+.+|++... .....
T Consensus 100 tGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~-----------a~~~p 168 (492)
T KOG2183|consen 100 TGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLS-----------AEASP 168 (492)
T ss_pred cchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccc-----------cccCc
Confidence 347888999999999999999543321 24578899999999988742 33478
Q ss_pred EEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec-ccc
Q 020406 159 VFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA-PFF 200 (326)
Q Consensus 159 i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~-p~~ 200 (326)
|+++|.|+||++|+++=++ +|..+.|++..| |++
T Consensus 169 vIafGGSYGGMLaAWfRlK--------YPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 169 VIAFGGSYGGMLAAWFRLK--------YPHIVLGALAASAPVL 203 (492)
T ss_pred EEEecCchhhHHHHHHHhc--------ChhhhhhhhhccCceE
Confidence 9999999999999999998 888888777655 544
No 175
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.56 E-value=0.00046 Score=59.07 Aligned_cols=79 Identities=16% Similarity=0.037 Sum_probs=58.6
Q ss_pred cCCcEEEeecCCCCCC---CCCchH-HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHh
Q 020406 105 ELQAVIISPDYRLAPE---NRLPAA-IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKA 180 (326)
Q Consensus 105 ~~g~~vi~~d~r~~~~---~~~~~~-~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~ 180 (326)
+.||.|+.+++++..+ .++|.. ..-+..+++|..... +...+.|+++|||.||+-++++|..
T Consensus 266 ~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~L-----------gf~~edIilygWSIGGF~~~waAs~--- 331 (517)
T KOG1553|consen 266 QLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVL-----------GFRQEDIILYGWSIGGFPVAWAASN--- 331 (517)
T ss_pred HhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHc-----------CCCccceEEEEeecCCchHHHHhhc---
Confidence 4599999999885443 345543 333445667776664 4666899999999999999999987
Q ss_pred CCCCCCCcceeEEEEeccccCCc
Q 020406 181 GSLELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 181 ~~~~~~~~~i~~~il~~p~~~~~ 203 (326)
+ +.++++|+-+.+-|..
T Consensus 332 -----Y-PdVkavvLDAtFDDll 348 (517)
T KOG1553|consen 332 -----Y-PDVKAVVLDATFDDLL 348 (517)
T ss_pred -----C-CCceEEEeecchhhhh
Confidence 3 6799999988766543
No 176
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.56 E-value=0.0017 Score=59.91 Aligned_cols=133 Identities=16% Similarity=0.201 Sum_probs=73.2
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchh---------------HHHHHhhcCCcEEEeecCC-CCCCC
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQN---------------YCFKLASELQAVIISPDYR-LAPEN 121 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~---------------~~~~la~~~g~~vi~~d~r-~~~~~ 121 (326)
.+..+.+.... ...+.|+||+++||..+.+.... +.+ .-..+.. -..++.+|.+ +.+.+
T Consensus 62 ~lFyw~~~s~~-~~~~~Pl~lwlnGGPG~ss~~G~--f~E~GP~~i~~~~~~~~~n~~sW~~--~~~~l~iDqP~G~G~S 136 (462)
T PTZ00472 62 HYFYWAFGPRN-GNPEAPVLLWMTGGPGCSSMFAL--LAENGPCLMNETTGDIYNNTYSWNN--EAYVIYVDQPAGVGFS 136 (462)
T ss_pred eEEEEEEEcCC-CCCCCCEEEEECCCCcHHHHHhh--hccCCCeEEeCCCCceeECCccccc--ccCeEEEeCCCCcCcc
Confidence 45555555443 35678999999998544322110 000 0000111 2455666654 21111
Q ss_pred -----CC----chHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCC-C-CCCCcce
Q 020406 122 -----RL----PAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGS-L-ELAPVRV 190 (326)
Q Consensus 122 -----~~----~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~-~-~~~~~~i 190 (326)
.+ ....+|+..+++...++.+. ....+++|+|+|+||..+..+|.+..... . ....-.+
T Consensus 137 ~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~----------~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inL 206 (462)
T PTZ00472 137 YADKADYDHNESEVSEDMYNFLQAFFGSHED----------LRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINL 206 (462)
T ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHhCcc----------ccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeee
Confidence 11 22445555555544333322 33479999999999999999988731111 1 1123579
Q ss_pred eEEEEeccccCCccc
Q 020406 191 KGYILLAPFFGGTVR 205 (326)
Q Consensus 191 ~~~il~~p~~~~~~~ 205 (326)
+|+++.+|+++....
T Consensus 207 kGi~IGNg~~dp~~q 221 (462)
T PTZ00472 207 AGLAVGNGLTDPYTQ 221 (462)
T ss_pred EEEEEeccccChhhh
Confidence 999999998876533
No 177
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.45 E-value=0.00039 Score=53.48 Aligned_cols=112 Identities=19% Similarity=0.160 Sum_probs=77.7
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCCccccCCCcccCCHHHHHHHHHhcCCCCCC
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKKSEAEGPREAFLNLELIDRFWRLSIPIGET 236 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (326)
.+..+.|.||||+.|+.+..+ .|+.+.++|.+++..+...... .++..
T Consensus 101 gs~~~sgcsmGayhA~nfvfr--------hP~lftkvialSGvYdardffg---------------------~yydd--- 148 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFR--------HPHLFTKVIALSGVYDARDFFG---------------------GYYDD--- 148 (227)
T ss_pred CCccccccchhhhhhhhhhee--------ChhHhhhheeecceeeHHHhcc---------------------ccccC---
Confidence 568899999999999999999 8999999999999887653211 11110
Q ss_pred CCCCccCCCCCCCCC-----cccCCCCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeee
Q 020406 237 TDHPLINPFGPVSPS-----LEAVDLDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFF 301 (326)
Q Consensus 237 ~~~~~~~~~~~~~~~-----~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~ 301 (326)
+....+|....... ++..+...+.+..|..|...+....+.+.+.....+..+.++.|-.|.+.
T Consensus 149 -Dv~ynsP~dylpg~~dp~~l~rlr~~~~vfc~G~e~~~L~~~~~L~~~l~dKqipaw~~~WggvaHdw~ 217 (227)
T COG4947 149 -DVYYNSPSDYLPGLADPFRLERLRRIDMVFCIGDEDPFLDNNQHLSRLLSDKQIPAWMHVWGGVAHDWG 217 (227)
T ss_pred -ceeecChhhhccCCcChHHHHHHhhccEEEEecCccccccchHHHHHHhccccccHHHHHhcccccccH
Confidence 01112222111110 11111227888999999888899999999988888888888988888654
No 178
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.35 E-value=0.00084 Score=60.68 Aligned_cols=90 Identities=20% Similarity=0.186 Sum_probs=57.8
Q ss_pred chhHHHHHhhcCCcE-----EEe-ecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhH
Q 020406 95 CQNYCFKLASELQAV-----IIS-PDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGG 168 (326)
Q Consensus 95 ~~~~~~~la~~~g~~-----vi~-~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG 168 (326)
|..++..|.. .||. ..+ +|.|.++. ........+...|+.+.+.. -.+|+|+||||||
T Consensus 67 ~~~li~~L~~-~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~~--------------~~kv~li~HSmGg 130 (389)
T PF02450_consen 67 FAKLIENLEK-LGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKKN--------------GKKVVLIAHSMGG 130 (389)
T ss_pred HHHHHHHHHh-cCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHhc--------------CCcEEEEEeCCCc
Confidence 6677788765 3652 233 79999876 22233444445555444332 3799999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCcceeEEEEeccccCC
Q 020406 169 NIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 169 ~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~ 202 (326)
.++..++.. ..........|+++|.+++.+..
T Consensus 131 l~~~~fl~~--~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 131 LVARYFLQW--MPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred hHHHHHHHh--ccchhhHHhhhhEEEEeCCCCCC
Confidence 999999877 11111122469999999976543
No 179
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.27 E-value=0.00095 Score=55.24 Aligned_cols=21 Identities=33% Similarity=0.281 Sum_probs=18.4
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.+|+++|||+||.++-.+...
T Consensus 78 ~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred ccceEEEecccHHHHHHHHHH
Confidence 689999999999999877665
No 180
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.20 E-value=0.0013 Score=58.09 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=62.7
Q ss_pred cEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcE---EEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccc
Q 020406 75 PIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAV---IISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLT 151 (326)
Q Consensus 75 p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~---vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 151 (326)
-.++++||++...+. +......+ .+.|+. +..+++... .... ...........++.+....
T Consensus 60 ~pivlVhG~~~~~~~-----~~~~~~~~-~~~g~~~~~~~~~~~~~~-~~~~-~~~~~~~ql~~~V~~~l~~-------- 123 (336)
T COG1075 60 EPIVLVHGLGGGYGN-----FLPLDYRL-AILGWLTNGVYAFELSGG-DGTY-SLAVRGEQLFAYVDEVLAK-------- 123 (336)
T ss_pred ceEEEEccCcCCcch-----hhhhhhhh-cchHHHhccccccccccc-CCCc-cccccHHHHHHHHHHHHhh--------
Confidence 369999986433322 33443333 333666 777776643 1111 1222334455555555433
Q ss_pred cccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCC--cceeEEEEeccccCCc
Q 020406 152 EVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAP--VRVKGYILLAPFFGGT 203 (326)
Q Consensus 152 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~--~~i~~~il~~p~~~~~ 203 (326)
....++.++||||||.++..++.. .+ .+++.++.+++.-...
T Consensus 124 --~ga~~v~LigHS~GG~~~ry~~~~--------~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 124 --TGAKKVNLIGHSMGGLDSRYYLGV--------LGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred --cCCCceEEEeecccchhhHHHHhh--------cCccceEEEEEEeccCCCCc
Confidence 223799999999999999977766 33 7899999988755443
No 181
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.19 E-value=0.0018 Score=61.37 Aligned_cols=66 Identities=17% Similarity=0.094 Sum_probs=42.9
Q ss_pred cEEEeecCCC----CCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 108 AVIISPDYRL----APENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 108 ~~vi~~d~r~----~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
+..+++|+-. ..+....++.+-+.++|+++.+..+.-.+.+ .--|.-|+++||||||.+|..++..
T Consensus 133 ~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~----~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 133 FDFFAVDFNEEFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYA----SPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred cceEEEcccchhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccC----CCCCceEEEEeccchhHHHHHHHhh
Confidence 4555566531 1122344567778889999888775411100 1225679999999999999998875
No 182
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.12 E-value=0.01 Score=47.59 Aligned_cols=92 Identities=20% Similarity=0.226 Sum_probs=52.8
Q ss_pred CCCcEEEEEcCCccccCCCCC-----------CcchhHHHHHhhcCCcEEEeecCC---------CCCCCCCchHHHHHH
Q 020406 72 TKLPIFYYIHGGGFCIGSRTW-----------PNCQNYCFKLASELQAVIISPDYR---------LAPENRLPAAIEDGY 131 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~-----------~~~~~~~~~la~~~g~~vi~~d~r---------~~~~~~~~~~~~d~~ 131 (326)
.+...+|++||.|+.....+. ...-+++.+ |...||-|+..+-- ..|.......++.+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~r-Av~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~ 177 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKR-AVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAK 177 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHH-HHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHH
Confidence 455689999999886444321 001123333 33447766665422 111111223344444
Q ss_pred HHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 132 MAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 132 ~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.++..+... .....+.++.||+||...+.+..+
T Consensus 178 yvw~~~v~p-------------a~~~sv~vvahsyGG~~t~~l~~~ 210 (297)
T KOG3967|consen 178 YVWKNIVLP-------------AKAESVFVVAHSYGGSLTLDLVER 210 (297)
T ss_pred HHHHHHhcc-------------cCcceEEEEEeccCChhHHHHHHh
Confidence 444444322 445889999999999999999988
No 183
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.11 E-value=0.0041 Score=49.68 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=54.5
Q ss_pred EEEEcCCccccCCCCCCcchhHHHHHhhcCC---cEEEeecCCCCCCC-CC----chHHHHHHHHHHHHHHHhhcCCCCc
Q 020406 77 FYYIHGGGFCIGSRTWPNCQNYCFKLASELQ---AVIISPDYRLAPEN-RL----PAAIEDGYMAVKWLQAQAVANEPDT 148 (326)
Q Consensus 77 vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g---~~vi~~d~r~~~~~-~~----~~~~~d~~~~~~~l~~~~~~~~~~~ 148 (326)
||+..|-+...+.... -..+...+....| +.+..++|+..... .+ .....++...++......+
T Consensus 8 vi~aRGT~E~~g~~~~--g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP------ 79 (179)
T PF01083_consen 8 VIFARGTGEPPGVGRV--GPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCP------ 79 (179)
T ss_dssp EEEE--TTSSTTTCCC--HHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHST------
T ss_pred EEEecCCCCCCCCccc--cHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCC------
Confidence 5555554443332111 1223344444444 55666778865443 23 2334444445544444432
Q ss_pred ccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec
Q 020406 149 WLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA 197 (326)
Q Consensus 149 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~ 197 (326)
..+|+|+|+|.|+.++..++.. .........+|.+++++.
T Consensus 80 -------~~kivl~GYSQGA~V~~~~~~~--~~l~~~~~~~I~avvlfG 119 (179)
T PF01083_consen 80 -------NTKIVLAGYSQGAMVVGDALSG--DGLPPDVADRIAAVVLFG 119 (179)
T ss_dssp -------TSEEEEEEETHHHHHHHHHHHH--TTSSHHHHHHEEEEEEES
T ss_pred -------CCCEEEEecccccHHHHHHHHh--ccCChhhhhhEEEEEEec
Confidence 2799999999999999998765 111222347899999887
No 184
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.09 E-value=0.0033 Score=66.03 Aligned_cols=102 Identities=20% Similarity=0.137 Sum_probs=63.2
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCC-CCchHHHHHHHHH-HHHHHHhhcCCCCccc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPEN-RLPAAIEDGYMAV-KWLQAQAVANEPDTWL 150 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~-~~~~~~~d~~~~~-~~l~~~~~~~~~~~~~ 150 (326)
..|.++++||.|. +... |..++..+.. ++.|+.++.++.... .....++++.+.+ +.+....
T Consensus 1067 ~~~~l~~lh~~~g---~~~~--~~~l~~~l~~--~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~--------- 1130 (1296)
T PRK10252 1067 DGPTLFCFHPASG---FAWQ--FSVLSRYLDP--QWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQ--------- 1130 (1296)
T ss_pred CCCCeEEecCCCC---chHH--HHHHHHhcCC--CCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhC---------
Confidence 3467999998643 2222 6666666643 588888888755322 1223444444322 2232211
Q ss_pred ccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 151 TEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 151 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
...++.++|||+||.+|..+|.+. .. .+.++..++++.+.
T Consensus 1131 ----~~~p~~l~G~S~Gg~vA~e~A~~l--~~---~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1131 ----PHGPYHLLGYSLGGTLAQGIAARL--RA---RGEEVAFLGLLDTW 1170 (1296)
T ss_pred ----CCCCEEEEEechhhHHHHHHHHHH--HH---cCCceeEEEEecCC
Confidence 114799999999999999999861 11 34788888888754
No 185
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=97.05 E-value=0.1 Score=47.50 Aligned_cols=109 Identities=17% Similarity=0.100 Sum_probs=67.6
Q ss_pred CCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEee-cCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccc
Q 020406 73 KLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISP-DYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLT 151 (326)
Q Consensus 73 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~-d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 151 (326)
+-|..||+-|. . .... +.. ..+..+.|...+.+ |-|..++..+-..-+--...++-+++....+
T Consensus 288 KPPL~VYFSGy--R-~aEG---FEg--y~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~L------- 352 (511)
T TIGR03712 288 KPPLNVYFSGY--R-PAEG---FEG--YFMMKRLGAPFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYL------- 352 (511)
T ss_pred CCCeEEeeccC--c-ccCc---chh--HHHHHhcCCCeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHh-------
Confidence 56899999853 2 2211 222 12334446555443 6776655444222211122333344444443
Q ss_pred cccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCcccCC
Q 020406 152 EVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVRKK 207 (326)
Q Consensus 152 ~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~~~ 207 (326)
+.+.+.+++.|-|||.+-|+.++++ -.+.++|+-=|.+++.....
T Consensus 353 -gF~~~qLILSGlSMGTfgAlYYga~----------l~P~AIiVgKPL~NLGtiA~ 397 (511)
T TIGR03712 353 -GFDHDQLILSGLSMGTFGALYYGAK----------LSPHAIIVGKPLVNLGTIAS 397 (511)
T ss_pred -CCCHHHeeeccccccchhhhhhccc----------CCCceEEEcCcccchhhhhc
Confidence 3788999999999999999999987 77888999889888766543
No 186
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.05 E-value=0.008 Score=54.36 Aligned_cols=119 Identities=18% Similarity=0.133 Sum_probs=79.8
Q ss_pred EEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCC----C----------CchHHH
Q 020406 63 LYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPEN----R----------LPAAIE 128 (326)
Q Consensus 63 ~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~----~----------~~~~~~ 128 (326)
+|.+........|+.|+|-|=|-.. ..+...-......+|+++|..|+..++|-.+.+ . ..+.+.
T Consensus 75 ~y~n~~~~~~~gPiFLmIGGEgp~~-~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALa 153 (514)
T KOG2182|consen 75 FYNNNQWAKPGGPIFLMIGGEGPES-DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALA 153 (514)
T ss_pred eeeccccccCCCceEEEEcCCCCCC-CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHH
Confidence 4444332234568888876543322 111101123567789999999999999954321 1 134677
Q ss_pred HHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 129 DGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 129 d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
|+...|+.+..+... -+..+.+.+|.|+-|.+++++=.+ +|+.+.|.|..++.+
T Consensus 154 Dla~fI~~~n~k~n~----------~~~~~WitFGgSYsGsLsAW~R~~--------yPel~~GsvASSapv 207 (514)
T KOG2182|consen 154 DLAEFIKAMNAKFNF----------SDDSKWITFGGSYSGSLSAWFREK--------YPELTVGSVASSAPV 207 (514)
T ss_pred HHHHHHHHHHhhcCC----------CCCCCeEEECCCchhHHHHHHHHh--------Cchhheeecccccce
Confidence 888887777665422 344699999999999999999888 899999999887543
No 187
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.97 E-value=0.015 Score=53.08 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCC--CCCCcceeEEEEeccccCC
Q 020406 128 EDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSL--ELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 128 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~--~~~~~~i~~~il~~p~~~~ 202 (326)
+++.+..++|+.-...++ .....+++|+|.|+||..+..+|.+...... ......++|+++.+|+++.
T Consensus 114 ~~a~~~~~fl~~f~~~~p-------~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 114 QAAEDLYEFLQQFFQKFP-------EYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHHHHSG-------GGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHHHHhhhhhh-------hccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 344445555555444433 2444699999999999998888876211111 1135789999999998765
No 188
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.97 E-value=0.0038 Score=50.55 Aligned_cols=58 Identities=21% Similarity=0.204 Sum_probs=43.4
Q ss_pred cEEEeecCCCCCCCC------------CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHH
Q 020406 108 AVIISPDYRLAPENR------------LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLA 175 (326)
Q Consensus 108 ~~vi~~d~r~~~~~~------------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a 175 (326)
..|++|-||...-.. +.....|+.+++++-.++.. +-..++|+|||.|+.+...++
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n------------~GRPfILaGHSQGs~~l~~LL 113 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN------------NGRPFILAGHSQGSMHLLRLL 113 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC------------CCCCEEEEEeChHHHHHHHHH
Confidence 689999999432211 22357899999997766642 226899999999999999998
Q ss_pred HH
Q 020406 176 VR 177 (326)
Q Consensus 176 ~~ 177 (326)
..
T Consensus 114 ~e 115 (207)
T PF11288_consen 114 KE 115 (207)
T ss_pred HH
Confidence 76
No 189
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.67 E-value=0.004 Score=51.54 Aligned_cols=53 Identities=25% Similarity=0.356 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 131 YMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
..|++++.+.....+ .++.+.|||.||++|...+... ... ...+|..++.+.+
T Consensus 69 ~~A~~yl~~~~~~~~-----------~~i~v~GHSkGGnLA~yaa~~~--~~~--~~~rI~~vy~fDg 121 (224)
T PF11187_consen 69 KSALAYLKKIAKKYP-----------GKIYVTGHSKGGNLAQYAAANC--DDE--IQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHhCC-----------CCEEEEEechhhHHHHHHHHHc--cHH--HhhheeEEEEeeC
Confidence 456677766654322 4699999999999999998761 111 2367888888774
No 190
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.61 E-value=0.015 Score=51.23 Aligned_cols=64 Identities=14% Similarity=0.121 Sum_probs=44.2
Q ss_pred hHHHHHhhcCCcEEEeec-CCC-CCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHH
Q 020406 97 NYCFKLASELQAVIISPD-YRL-APENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNL 174 (326)
Q Consensus 97 ~~~~~la~~~g~~vi~~d-~r~-~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 174 (326)
+....|..+ |+.|+.+| .|. +.+..-....+|....+++-..+-+ ..++.++|+|.|+-+--..
T Consensus 278 ~v~~~l~~~-gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~-------------~~~~~liGySfGADvlP~~ 343 (456)
T COG3946 278 EVAEALQKQ-GVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWG-------------AKRVLLIGYSFGADVLPFA 343 (456)
T ss_pred HHHHHHHHC-CCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhC-------------cceEEEEeecccchhhHHH
Confidence 345555555 99999999 342 2333334566788888888776543 3799999999999775443
No 191
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.57 E-value=0.015 Score=44.24 Aligned_cols=21 Identities=33% Similarity=0.457 Sum_probs=19.9
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.+|++.|||+||.+|..++..
T Consensus 64 ~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 64 YSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp SEEEEEEETHHHHHHHHHHHH
T ss_pred ccchhhccchHHHHHHHHHHh
Confidence 689999999999999999987
No 192
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.56 E-value=0.0067 Score=43.65 Aligned_cols=58 Identities=22% Similarity=0.375 Sum_probs=43.1
Q ss_pred CCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 257 LDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 257 ~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
.+|+|++.++.| .+.+.++.+++++.. .++++.++.+|+..... ..-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gHg~~~~~-----s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGHGVYAGG-----SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCcceecCC-----ChHHHHHHHHHHHc
Confidence 359999999999 667788888888764 48999999999776311 13456666677653
No 193
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.56 E-value=0.0073 Score=46.90 Aligned_cols=40 Identities=23% Similarity=0.223 Sum_probs=27.6
Q ss_pred CCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 156 FGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 156 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
..+|.+.|||+||.+|..++... .... ......++.+.+.
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~--~~~~--~~~~~~~~~fg~p 66 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDL--RGRG--LGRLVRVYTFGPP 66 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHH--Hhcc--CCCceEEEEeCCC
Confidence 47999999999999999998872 1110 1345556666643
No 194
>PLN02209 serine carboxypeptidase
Probab=96.35 E-value=0.11 Score=47.77 Aligned_cols=60 Identities=15% Similarity=0.273 Sum_probs=43.9
Q ss_pred cEEEEEcCcC--cchhhHHHHHHHHHHC---------------C-----Cc-EEEEEeCCCceeeeecCCCCHHHHHHHH
Q 020406 259 PILVVVGGSD--LLKDRAEDYAKTLKNF---------------G-----KK-VEYVEFEGKQHGFFTIDPNSEDANRLMQ 315 (326)
Q Consensus 259 P~lii~G~~D--~~~~~~~~~~~~l~~~---------------g-----~~-~~l~~~~~~~H~~~~~~~~~~~~~~~~~ 315 (326)
++||..|+.| +....++.+.+.|+-. | .+ .++..+-++||.- . .+++.++.
T Consensus 353 rVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV-p-----~qP~~al~ 426 (437)
T PLN02209 353 RSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA-E-----YLPEESSI 426 (437)
T ss_pred eEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc-C-----cCHHHHHH
Confidence 8999999999 5555667777777511 1 22 6777888899954 2 26788899
Q ss_pred HHHHHhhhc
Q 020406 316 IIKHFIAEN 324 (326)
Q Consensus 316 ~~~~fl~~~ 324 (326)
.+.+|+...
T Consensus 427 m~~~fi~~~ 435 (437)
T PLN02209 427 MFQRWISGQ 435 (437)
T ss_pred HHHHHHcCC
Confidence 999998754
No 195
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.06 E-value=0.14 Score=46.99 Aligned_cols=60 Identities=15% Similarity=0.252 Sum_probs=43.5
Q ss_pred cEEEEEcCcC--cchhhHHHHHHHHHHC---------------C-----C-cEEEEEeCCCceeeeecCCCCHHHHHHHH
Q 020406 259 PILVVVGGSD--LLKDRAEDYAKTLKNF---------------G-----K-KVEYVEFEGKQHGFFTIDPNSEDANRLMQ 315 (326)
Q Consensus 259 P~lii~G~~D--~~~~~~~~~~~~l~~~---------------g-----~-~~~l~~~~~~~H~~~~~~~~~~~~~~~~~ 315 (326)
++||..|..| +.....+.+.+.|+=. | . ..++..+-++||... .+++.++.
T Consensus 349 rVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp------~qP~~al~ 422 (433)
T PLN03016 349 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE------YRPNETFI 422 (433)
T ss_pred eEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC------CCHHHHHH
Confidence 9999999999 5555666676666511 1 1 267788889999542 25788899
Q ss_pred HHHHHhhhc
Q 020406 316 IIKHFIAEN 324 (326)
Q Consensus 316 ~~~~fl~~~ 324 (326)
.+.+||+..
T Consensus 423 m~~~Fi~~~ 431 (433)
T PLN03016 423 MFQRWISGQ 431 (433)
T ss_pred HHHHHHcCC
Confidence 999999764
No 196
>PLN02606 palmitoyl-protein thioesterase
Probab=96.05 E-value=0.035 Score=47.59 Aligned_cols=38 Identities=24% Similarity=0.216 Sum_probs=30.8
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCC--cceeEEEEeccccCC
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAP--VRVKGYILLAPFFGG 202 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~--~~i~~~il~~p~~~~ 202 (326)
+-+.++|+|.||.++-.++.+ .+ +.++.+|.+++....
T Consensus 95 ~G~naIGfSQGglflRa~ier--------c~~~p~V~nlISlggph~G 134 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEF--------CDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred CceEEEEEcchhHHHHHHHHH--------CCCCCCcceEEEecCCcCC
Confidence 469999999999999999988 32 468999998865433
No 197
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.86 E-value=0.17 Score=46.35 Aligned_cols=49 Identities=18% Similarity=0.280 Sum_probs=36.6
Q ss_pred CCcEEEeecChhHHHHHHHHHHHHhCCC---CCCCcceeEEEEeccccCCccc
Q 020406 156 FGKVFISGDSAGGNIAHNLAVRLKAGSL---ELAPVRVKGYILLAPFFGGTVR 205 (326)
Q Consensus 156 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~---~~~~~~i~~~il~~p~~~~~~~ 205 (326)
.+.+.|.|.|++|+.+-++|..- +... ......++|+++-+|.++....
T Consensus 167 ~~~fyI~GESYAG~YVP~La~~I-~~~N~~~~~~~iNLkG~~IGNg~td~~~~ 218 (454)
T KOG1282|consen 167 SNDFYIAGESYAGHYVPALAQEI-LKGNKKCCKPNINLKGYAIGNGLTDPEID 218 (454)
T ss_pred CCCeEEecccccceehHHHHHHH-HhccccccCCcccceEEEecCcccCcccc
Confidence 37899999999999999988762 1111 2334689999999998876433
No 198
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.85 E-value=0.022 Score=47.46 Aligned_cols=41 Identities=29% Similarity=0.353 Sum_probs=27.8
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
.+|.+.|||+||.+|..++... .... ....+..+..-+|..
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l--~~~~-~~~~i~~~tFg~P~v 168 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDL--RLRG-PGSDVTVYTFGQPRV 168 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHH--HhhC-CCCceEEEEeCCCCC
Confidence 6899999999999999988762 1111 134466555555544
No 199
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.82 E-value=0.13 Score=47.85 Aligned_cols=120 Identities=21% Similarity=0.182 Sum_probs=77.0
Q ss_pred CeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCC-----CCC---ch----
Q 020406 58 DLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPE-----NRL---PA---- 125 (326)
Q Consensus 58 ~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~-----~~~---~~---- 125 (326)
.|.+.+++|..-+ + -++.+=||||..+-........ +. .+...||++++-|--.... ..+ ++
T Consensus 16 ~i~fev~LP~~WN-g---R~~~~GgGG~~G~i~~~~~~~~-~~-~~~~~G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~~d 89 (474)
T PF07519_consen 16 NIRFEVWLPDNWN-G---RFLQVGGGGFAGGINYADGKAS-MA-TALARGYATASTDSGHQGSAGSDDASFGNNPEALLD 89 (474)
T ss_pred eEEEEEECChhhc-c---CeEEECCCeeeCcccccccccc-cc-hhhhcCeEEEEecCCCCCCcccccccccCCHHHHHH
Confidence 6888999998542 2 3677777888533322100001 12 2234499999988543222 111 11
Q ss_pred ----HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 126 ----AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 126 ----~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
.+.+...+-+.|.+.. |...+++-...|.|.||.-++..|.+ +|+.+.|+|..+|.++
T Consensus 90 fa~ra~h~~~~~aK~l~~~~----------Yg~~p~~sY~~GcS~GGRqgl~~AQr--------yP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 90 FAYRALHETTVVAKALIEAF----------YGKAPKYSYFSGCSTGGRQGLMAAQR--------YPEDFDGILAGAPAIN 151 (474)
T ss_pred HHhhHHHHHHHHHHHHHHHH----------hCCCCCceEEEEeCCCcchHHHHHHh--------ChhhcCeEEeCCchHH
Confidence 2333333334444433 45677999999999999999999999 9999999999999764
No 200
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.80 E-value=0.074 Score=45.23 Aligned_cols=37 Identities=22% Similarity=0.106 Sum_probs=27.9
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
+=+.++|+|.||.+.-.++.+- ....++.+|.+++..
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c-------~~~~V~nlISlggph 116 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRC-------NDPPVHNLISLGGPH 116 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH--------TSS-EEEEEEES--T
T ss_pred cceeeeeeccccHHHHHHHHHC-------CCCCceeEEEecCcc
Confidence 5699999999999999999882 236799999988644
No 201
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.36 E-value=0.21 Score=41.80 Aligned_cols=103 Identities=20% Similarity=0.093 Sum_probs=59.2
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCC-CCCCchHHHHHHHHHHHHHHHhhcCCCCccccc
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAP-ENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTE 152 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~-~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~ 152 (326)
.| +|++||-|-...+.. ...+...+-..-|..|.+.|...+- .+.+....+.+..+-+.++.. +.+
T Consensus 24 ~P-~ii~HGigd~c~~~~---~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m-~~l-------- 90 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLS---MANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQM-PEL-------- 90 (296)
T ss_pred CC-EEEEeccCcccccch---HHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcc-hhc--------
Confidence 55 566798544333322 3344444444458888888865441 122222233333333344322 221
Q ss_pred ccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 153 VADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 153 ~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
++-+.++|.|.||.++-.++.. . ..+.++..|.+++.
T Consensus 91 ---sqGynivg~SQGglv~Raliq~---c----d~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 91 ---SQGYNIVGYSQGGLVARALIQF---C----DNPPVKNFISLGGP 127 (296)
T ss_pred ---cCceEEEEEccccHHHHHHHHh---C----CCCCcceeEeccCC
Confidence 2679999999999999999887 2 23667788877653
No 202
>PLN02633 palmitoyl protein thioesterase family protein
Probab=95.35 E-value=0.24 Score=42.66 Aligned_cols=37 Identities=30% Similarity=0.214 Sum_probs=30.3
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCC--cceeEEEEeccccC
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAP--VRVKGYILLAPFFG 201 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~--~~i~~~il~~p~~~ 201 (326)
+-+.++|+|.||.++-.++.+ .+ +.++.+|.+++.-.
T Consensus 94 ~G~naIGfSQGGlflRa~ier--------c~~~p~V~nlISlggph~ 132 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEF--------CDGGPPVYNYISLAGPHA 132 (314)
T ss_pred CcEEEEEEccchHHHHHHHHH--------CCCCCCcceEEEecCCCC
Confidence 469999999999999999988 33 46899998876443
No 203
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.29 E-value=0.057 Score=50.46 Aligned_cols=92 Identities=15% Similarity=0.056 Sum_probs=55.4
Q ss_pred chhHHHHHhhcCCc-----EEEeecCCCCCCCC--CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChh
Q 020406 95 CQNYCFKLASELQA-----VIISPDYRLAPENR--LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAG 167 (326)
Q Consensus 95 ~~~~~~~la~~~g~-----~vi~~d~r~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~G 167 (326)
|..++..|+.. || ....+|+|+++... .......+...|+.+.+... -.+|+|+|||||
T Consensus 158 w~kLIe~L~~i-GY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~ng-------------gkKVVLV~HSMG 223 (642)
T PLN02517 158 WAVLIANLARI-GYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNG-------------GKKVVVVPHSMG 223 (642)
T ss_pred HHHHHHHHHHc-CCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcC-------------CCeEEEEEeCCc
Confidence 34667777654 76 44556788774321 12233445555555543321 269999999999
Q ss_pred HHHHHHHHHHHHhCC---------CCCCCcceeEEEEeccccCC
Q 020406 168 GNIAHNLAVRLKAGS---------LELAPVRVKGYILLAPFFGG 202 (326)
Q Consensus 168 G~~a~~~a~~~~~~~---------~~~~~~~i~~~il~~p~~~~ 202 (326)
|.+++.++.. +.. .+....-|++.|.++|.+..
T Consensus 224 glv~lyFL~w--v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 224 VLYFLHFMKW--VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHh--ccccccccCCcchHHHHHHHHHheecccccCC
Confidence 9999998764 111 11112457889998876544
No 204
>PLN02454 triacylglycerol lipase
Probab=95.15 E-value=0.083 Score=47.47 Aligned_cols=20 Identities=25% Similarity=0.443 Sum_probs=18.5
Q ss_pred cEEEeecChhHHHHHHHHHH
Q 020406 158 KVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 158 ~i~l~G~S~GG~~a~~~a~~ 177 (326)
+|.+.|||+||.+|+..|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 49999999999999999876
No 205
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.14 E-value=0.11 Score=42.10 Aligned_cols=84 Identities=19% Similarity=0.180 Sum_probs=49.2
Q ss_pred chhHHHHHhhcCCcEEEeecCCCCCCC-CCchHHHHHHH-HHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHH
Q 020406 95 CQNYCFKLASELQAVIISPDYRLAPEN-RLPAAIEDGYM-AVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAH 172 (326)
Q Consensus 95 ~~~~~~~la~~~g~~vi~~d~r~~~~~-~~~~~~~d~~~-~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~ 172 (326)
|..+...+.. .+.|+.++++..... .....+++... ..+.+... ....++.++|||+||.++.
T Consensus 15 ~~~~~~~l~~--~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~l~g~s~Gg~~a~ 79 (212)
T smart00824 15 YARLAAALRG--RRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA-------------AGGRPFVLVGHSSGGLLAH 79 (212)
T ss_pred HHHHHHhcCC--CccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------------cCCCCeEEEEECHHHHHHH
Confidence 5555555543 477888887654321 22223333322 22333322 1225799999999999999
Q ss_pred HHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 173 NLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 173 ~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
.++.+. .. .+..+.+++++.+
T Consensus 80 ~~a~~l--~~---~~~~~~~l~~~~~ 100 (212)
T smart00824 80 AVAARL--EA---RGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHH--Hh---CCCCCcEEEEEcc
Confidence 998862 11 2356778877764
No 206
>PLN00413 triacylglycerol lipase
Probab=94.81 E-value=0.088 Score=47.94 Aligned_cols=21 Identities=33% Similarity=0.498 Sum_probs=19.1
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.++.|.|||+||.+|...+..
T Consensus 284 ~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 284 SKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CeEEEEecCHHHHHHHHHHHH
Confidence 689999999999999998864
No 207
>PF03283 PAE: Pectinacetylesterase
Probab=94.11 E-value=0.2 Score=44.79 Aligned_cols=41 Identities=22% Similarity=0.085 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 126 AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 126 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
...-+.+++++|..+. --++++|+|.|.|+||.-++.-+-.
T Consensus 136 G~~i~~avl~~l~~~g-----------l~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 136 GYRILRAVLDDLLSNG-----------LPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred cHHHHHHHHHHHHHhc-----------CcccceEEEeccChHHHHHHHHHHH
Confidence 3456778899998872 1345899999999999999887654
No 208
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.90 E-value=4.3 Score=35.95 Aligned_cols=62 Identities=18% Similarity=0.226 Sum_probs=50.5
Q ss_pred cEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 259 PILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 259 P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
+.+.+.+..| .+.++.+++++..++.|..++..-+.++.|.-+... .+..+.+...+|++.+
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~----~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRS----FPKTYLKKCSEFLRSV 290 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeecc----CcHHHHHHHHHHHHhc
Confidence 7777888888 667788899899999999999999999999665433 4578888999998764
No 209
>PLN02162 triacylglycerol lipase
Probab=93.88 E-value=0.22 Score=45.34 Aligned_cols=21 Identities=29% Similarity=0.403 Sum_probs=18.8
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.++++.|||+||.+|..++..
T Consensus 278 ~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 278 LKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred ceEEEEecChHHHHHHHHHHH
Confidence 689999999999999998764
No 210
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=93.39 E-value=0.2 Score=45.40 Aligned_cols=69 Identities=14% Similarity=0.023 Sum_probs=42.9
Q ss_pred chhHHHHHhhcCCcE------EEeecCCCCCCCC--CchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecCh
Q 020406 95 CQNYCFKLASELQAV------IISPDYRLAPENR--LPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSA 166 (326)
Q Consensus 95 ~~~~~~~la~~~g~~------vi~~d~r~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 166 (326)
|..++..++. .||. -..+|+|++.... ....+......++...+... -.+|+|++|||
T Consensus 126 w~~~i~~lv~-~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G-------------~kkVvlisHSM 191 (473)
T KOG2369|consen 126 WHELIENLVG-IGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNG-------------GKKVVLISHSM 191 (473)
T ss_pred HHHHHHHHHh-hCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcC-------------CCceEEEecCC
Confidence 3445555543 3664 3567888865321 22334445555555544322 17999999999
Q ss_pred hHHHHHHHHHH
Q 020406 167 GGNIAHNLAVR 177 (326)
Q Consensus 167 GG~~a~~~a~~ 177 (326)
||.+.+.+...
T Consensus 192 G~l~~lyFl~w 202 (473)
T KOG2369|consen 192 GGLYVLYFLKW 202 (473)
T ss_pred ccHHHHHHHhc
Confidence 99999998866
No 211
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=93.30 E-value=0.47 Score=41.75 Aligned_cols=116 Identities=22% Similarity=0.238 Sum_probs=69.2
Q ss_pred CCeEEEE---EccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHHHHHhhc--------CCcEEEeecCCCCCCCCCc-
Q 020406 57 HDLSLRL---YKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASE--------LQAVIISPDYRLAPENRLP- 124 (326)
Q Consensus 57 ~~~~~~~---~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~--------~g~~vi~~d~r~~~~~~~~- 124 (326)
.++.++. -.|.....++.-.++++| ||. |+-.. +..++.-|..- .-+.||+|..++.+-+..+
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~H--GwP-Gsv~E--FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s 206 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLH--GWP-GSVRE--FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS 206 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEec--CCC-chHHH--HHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc
Confidence 3565553 333332233445688999 553 44332 44454444322 2368899887754322221
Q ss_pred -h--HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 125 -A--AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 125 -~--~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
. ....++.+++-|.-+ ++-++..|-|.-.|..++..+|.- +|+.+.|.=+..+
T Consensus 207 k~GFn~~a~ArvmrkLMlR-------------Lg~nkffiqGgDwGSiI~snlasL--------yPenV~GlHlnm~ 262 (469)
T KOG2565|consen 207 KTGFNAAATARVMRKLMLR-------------LGYNKFFIQGGDWGSIIGSNLASL--------YPENVLGLHLNMC 262 (469)
T ss_pred cCCccHHHHHHHHHHHHHH-------------hCcceeEeecCchHHHHHHHHHhh--------cchhhhHhhhccc
Confidence 1 233445556655543 455899999999999999999988 7888777655433
No 212
>PLN02934 triacylglycerol lipase
Probab=93.21 E-value=0.17 Score=46.60 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=19.1
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.++++.|||+||.+|..++..
T Consensus 321 ~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 321 AKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred CeEEEeccccHHHHHHHHHHH
Confidence 689999999999999999864
No 213
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=92.94 E-value=2.7 Score=37.10 Aligned_cols=40 Identities=20% Similarity=0.275 Sum_probs=31.3
Q ss_pred cEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeee
Q 020406 259 PILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFF 301 (326)
Q Consensus 259 P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~ 301 (326)
|-+|+.|..| -+++.+..+++.|... .-+...|+..|...
T Consensus 331 pKyivnaSgDdff~pDsa~lYyd~LPG~---kaLrmvPN~~H~~~ 372 (507)
T COG4287 331 PKYIVNASGDDFFVPDSANLYYDDLPGE---KALRMVPNDPHNLI 372 (507)
T ss_pred cceeecccCCcccCCCccceeeccCCCc---eeeeeCCCCcchhh
Confidence 8899999888 4466777788888643 47999999999543
No 214
>PLN02408 phospholipase A1
Probab=92.79 E-value=0.34 Score=43.03 Aligned_cols=21 Identities=29% Similarity=0.275 Sum_probs=19.0
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
-+|.|.|||+||.+|...|..
T Consensus 200 ~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 369999999999999998876
No 215
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=92.78 E-value=0.12 Score=42.41 Aligned_cols=42 Identities=29% Similarity=0.346 Sum_probs=29.6
Q ss_pred CCcEEEEEcCcC--cchhhHHHHHHHHHHCCCcEEEEEeCCCceeeee
Q 020406 257 LDPILVVVGGSD--LLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFT 302 (326)
Q Consensus 257 ~~P~lii~G~~D--~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~ 302 (326)
..|+++++|++| ++......+.+. -...+++++++.||....
T Consensus 175 ~~p~l~i~~~~D~~~p~~~~~~~~~~----~~~~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 175 KVPTLIIWGEDDPLVPPESSEQLAKL----IPNSQLVLIEGSGHFAFL 218 (230)
T ss_dssp TSEEEEEEETTCSSSHHHHHHHHHHH----STTEEEEEETTCCSTHHH
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHh----cCCCEEEECCCCChHHHh
Confidence 449999999999 444444443333 345799999999995543
No 216
>PLN02571 triacylglycerol lipase
Probab=92.47 E-value=0.24 Score=44.66 Aligned_cols=20 Identities=35% Similarity=0.406 Sum_probs=18.6
Q ss_pred cEEEeecChhHHHHHHHHHH
Q 020406 158 KVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 158 ~i~l~G~S~GG~~a~~~a~~ 177 (326)
+|.|.|||+||.+|+..|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 69999999999999998876
No 217
>PLN02310 triacylglycerol lipase
Probab=92.14 E-value=0.19 Score=45.11 Aligned_cols=21 Identities=29% Similarity=0.333 Sum_probs=18.9
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.+|.|.|||+||.+|+..|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999998865
No 218
>PLN02324 triacylglycerol lipase
Probab=92.00 E-value=0.3 Score=44.01 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=18.9
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
-+|.|.|||+||.+|+..|..
T Consensus 215 ~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 379999999999999999875
No 219
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=91.80 E-value=1.9 Score=39.75 Aligned_cols=64 Identities=19% Similarity=0.218 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccC
Q 020406 125 AAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFG 201 (326)
Q Consensus 125 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~ 201 (326)
..-+|+..+.+.+.+..+... -..++.+|+|.|+||+-+..+|... .... ...+++++++++..
T Consensus 174 ~~~~D~~~~~~~f~~~fp~~~--------r~~~~~~L~GESYgg~yip~~A~~L--~~~~---~~~~~~~nlssvli 237 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFPHYA--------RLLSPKFLAGESYGGHYIPVFAHEL--LEDN---IALNGNVNLSSVLI 237 (498)
T ss_pred ccchhHHHHHHHHHHHHHHHh--------hhcCceeEeeccccchhhHHHHHHH--HHhc---cccCCceEeeeeee
Confidence 345688888887777665533 2226899999999999999988762 1111 24556666555443
No 220
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.70 E-value=2.3 Score=35.36 Aligned_cols=42 Identities=26% Similarity=0.305 Sum_probs=27.9
Q ss_pred CCCcEEEeecChhHHHHHHHHHHHHhCCC-CCCCcceeEEEEecc
Q 020406 155 DFGKVFISGDSAGGNIAHNLAVRLKAGSL-ELAPVRVKGYILLAP 198 (326)
Q Consensus 155 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~-~~~~~~i~~~il~~p 198 (326)
..++++|+|+|+|+.++...+.+. ... ...+..+..+..-+|
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l--~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRL--AADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHH--HhcCCCCcCceEEEEecCC
Confidence 347899999999999999988773 221 111245555554445
No 221
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=91.67 E-value=0.51 Score=41.85 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 128 EDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 128 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
..+.+.++.|....+. -+|.+.|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~-------------~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN-------------YSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCC-------------cEEEEecCChHHHHHHHHHHH
Confidence 4555666666665533 589999999999999999887
No 222
>PLN02802 triacylglycerol lipase
Probab=91.49 E-value=0.55 Score=43.33 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=18.9
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
-+|.|.|||+||.+|...|..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 379999999999999998876
No 223
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.38 E-value=0.24 Score=45.69 Aligned_cols=21 Identities=33% Similarity=0.347 Sum_probs=18.9
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
-+|.|.|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999998865
No 224
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=90.81 E-value=0.49 Score=40.01 Aligned_cols=21 Identities=38% Similarity=0.803 Sum_probs=19.7
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.+|.+.|||+||.+|..+..+
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~ 296 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred ceEEEeccccchHHHHHhccc
Confidence 799999999999999999877
No 225
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.81 E-value=0.49 Score=40.01 Aligned_cols=21 Identities=38% Similarity=0.803 Sum_probs=19.7
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.+|.+.|||+||.+|..+..+
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~ 296 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred ceEEEeccccchHHHHHhccc
Confidence 799999999999999999877
No 226
>PLN02753 triacylglycerol lipase
Probab=90.57 E-value=0.47 Score=43.93 Aligned_cols=21 Identities=29% Similarity=0.335 Sum_probs=19.3
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
-+|.|.|||+||.+|+..|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 589999999999999999875
No 227
>PLN02847 triacylglycerol lipase
Probab=90.48 E-value=0.46 Score=44.62 Aligned_cols=21 Identities=38% Similarity=0.343 Sum_probs=19.3
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
-+++|.|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 589999999999999999876
No 228
>PLN02719 triacylglycerol lipase
Probab=90.38 E-value=0.49 Score=43.68 Aligned_cols=21 Identities=29% Similarity=0.338 Sum_probs=19.2
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
-+|.|.|||+||.+|+..|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999998876
No 229
>PLN02761 lipase class 3 family protein
Probab=89.98 E-value=0.59 Score=43.27 Aligned_cols=21 Identities=24% Similarity=0.273 Sum_probs=19.1
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.+|.+.|||+||.+|...|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 479999999999999998875
No 230
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.21 E-value=1.5 Score=36.86 Aligned_cols=22 Identities=32% Similarity=0.614 Sum_probs=19.2
Q ss_pred CCcEEEeecChhHHHHHHHHHH
Q 020406 156 FGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 156 ~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
..++.|.|.||||.+|......
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS~ 215 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGSL 215 (371)
T ss_pred cccceeeeeecccHHHHhhccc
Confidence 4689999999999999888764
No 231
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=89.13 E-value=2 Score=35.17 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=25.8
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
++|.|+++|||=++|..+... ..++..+++++-
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~----------~~~~~aiAINGT 89 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQG----------IPFKRAIAINGT 89 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhcc----------CCcceeEEEECC
Confidence 689999999999999887644 346777777653
No 232
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=89.11 E-value=1.4 Score=34.99 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=27.7
Q ss_pred CCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEe-cccc
Q 020406 155 DFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILL-APFF 200 (326)
Q Consensus 155 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~-~p~~ 200 (326)
...++.++|||+|..++...+.. ....+..++++ ||-+
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~--------~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQ--------GGLRVDDVVLVGSPGM 145 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhh--------CCCCcccEEEECCCCC
Confidence 34799999999999999888765 34566666654 4544
No 233
>PF03991 Prion_octapep: Copper binding octapeptide repeat; InterPro: IPR020949 Prion protein (PrP-c) [, , ] is a small glycoprotein found in high quantity in the brain of animals infected with certain degenerative neurological diseases, such as sheep scrapie and bovine spongiform encephalopathy (BSE), and the human dementias Creutzfeldt-Jacob disease (CJD) and Gerstmann-Straussler syndrome (GSS). PrP-c is encoded in the host genome and is expressed both in normal and infected cells. During infection, however, the PrP-c molecule become altered (conformationally rather than at the amino acid level) to an abnormal isoform, PrP-sc. In detergent-treated brain extracts from infected individuals, fibrils composed of polymers of PrP-sc, namely scrapie-associated fibrils or prion rods, can be evidenced by electron microscopy. The precise function of the normal PrP isoform in healthy individuals remains unknown. Several results, mainly obtained in transgenic animals, indicate that PrP-c might play a role in long-term potentiation, in sleep physiology, in oxidative burst compensation (PrP can fix four Cu2+ through its octarepeat domain), in interactions with the extracellular matrix (PrP-c can bind to the precursor of the laminin receptor, LRP), in apoptosis and in signal transduction (costimulation of PrP-c induces a modulation of Fyn kinase phosphorylation) []. The normal isoform, PrP-c, is anchored at the cell membrane, in rafts, through a glycosyl phosphatidyl inositol (GPI); its half-life at the cell surface is 5 h, after which the protein is internalised through a caveolae-dependent mechanism and degraded in the endolysosome compartment. Conversion between PrP-c and PrP-sc occurs likely during the internalisation process. This repeat is found at the amino terminus of mammalian prion proteins. It has been shown to bind to copper [].
Probab=87.73 E-value=0.22 Score=17.75 Aligned_cols=6 Identities=67% Similarity=1.520 Sum_probs=4.3
Q ss_pred cCCccc
Q 020406 81 HGGGFC 86 (326)
Q Consensus 81 HGgg~~ 86 (326)
|||||-
T Consensus 2 hgG~Wg 7 (8)
T PF03991_consen 2 HGGGWG 7 (8)
T ss_pred CCCcCC
Confidence 788773
No 234
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.28 E-value=0.87 Score=42.42 Aligned_cols=62 Identities=13% Similarity=0.121 Sum_probs=47.4
Q ss_pred cEEEEEcCcC--cchhhHHHHHHHHHHC-CC-------cEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 259 PILVVVGGSD--LLKDRAEDYAKTLKNF-GK-------KVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 259 P~lii~G~~D--~~~~~~~~~~~~l~~~-g~-------~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
.+|+.||..| ++...+..+++++.+. +. =++|...||++|...-.- ...-+.+..+.+|+++
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g---~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG---PDPFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC---CCCCCHHHHHHHHHhC
Confidence 8999999999 6677888899887653 22 269999999999765332 1234789999999875
No 235
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=87.02 E-value=3.8 Score=36.03 Aligned_cols=50 Identities=24% Similarity=0.353 Sum_probs=35.5
Q ss_pred cCCCcEEEeecChhHHHHHHHHHHHHhCC--CCCCCcceeEEEEeccccCCc
Q 020406 154 ADFGKVFISGDSAGGNIAHNLAVRLKAGS--LELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 154 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~--~~~~~~~i~~~il~~p~~~~~ 203 (326)
....+++|.|.|+||+.+-.+|.+..-.. ....+-.++|+++-+|+++..
T Consensus 48 ~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 48 YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred cccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCcc
Confidence 34478999999999999998887621000 111235799999999988654
No 236
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=86.57 E-value=2.8 Score=39.50 Aligned_cols=67 Identities=21% Similarity=0.313 Sum_probs=47.2
Q ss_pred CCcEEEEEcCcC--cch-hhHHHHHHHHHHC-C--CcEEEEEeCCCceeeeecC----------CCCHHHHHHHHHHHHH
Q 020406 257 LDPILVVVGGSD--LLK-DRAEDYAKTLKNF-G--KKVEYVEFEGKQHGFFTID----------PNSEDANRLMQIIKHF 320 (326)
Q Consensus 257 ~~P~lii~G~~D--~~~-~~~~~~~~~l~~~-g--~~~~l~~~~~~~H~~~~~~----------~~~~~~~~~~~~~~~f 320 (326)
-+|++|+||..| +++ ..++-++...+.. | ...+|+.++++.| |+.+. |......+.++.|..+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqH-fDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~ 633 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQH-FDAFLDFPGFDTRFVPLHPYFFQALDLMWAH 633 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCee-chhhccCCCCCcccccccHHHHHHHHHHHHH
Confidence 349999999999 333 3456666665532 3 4679999999888 44321 3456678889999999
Q ss_pred hhhc
Q 020406 321 IAEN 324 (326)
Q Consensus 321 l~~~ 324 (326)
|++-
T Consensus 634 L~~G 637 (690)
T PF10605_consen 634 LKSG 637 (690)
T ss_pred hhcC
Confidence 8763
No 237
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=85.37 E-value=2.4 Score=27.21 Aligned_cols=36 Identities=17% Similarity=0.076 Sum_probs=16.4
Q ss_pred eeeeEecCCCCeEEEEE---ccC--CCCCCCCcEEEEEcCC
Q 020406 48 WKDVVFDPVHDLSLRLY---KPA--LPVSTKLPIFYYIHGG 83 (326)
Q Consensus 48 ~~~v~~~~~~~~~~~~~---~P~--~~~~~~~p~vv~~HGg 83 (326)
.++..+.+.|+--+.++ .+. ....+++|+|++.||-
T Consensus 12 ~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL 52 (63)
T PF04083_consen 12 CEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGL 52 (63)
T ss_dssp -EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--T
T ss_pred cEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCc
Confidence 45555555666444333 233 1145778999999973
No 238
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=85.16 E-value=19 Score=31.48 Aligned_cols=39 Identities=21% Similarity=0.103 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 127 IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 127 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
...+..++.+|..+... -++|+++|+|-|++.|--+|.-
T Consensus 104 ~~nI~~AYrFL~~~yep------------GD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 104 VQNIREAYRFLIFNYEP------------GDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHHhcCC------------CCeEEEeeccchhHHHHHHHHH
Confidence 45678899999887632 3899999999999999888754
No 239
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=81.17 E-value=2.7 Score=36.15 Aligned_cols=39 Identities=18% Similarity=0.128 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 127 IEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 127 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
...+..++.++.++. -..++|.|+|+|.|+..|-.++-.
T Consensus 74 ~~~I~~ay~~l~~~~------------~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 74 EARIRDAYRFLSKNY------------EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHHHhcc------------CCcceEEEEecCccHHHHHHHHHH
Confidence 456777888887665 223789999999999999998854
No 240
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=78.49 E-value=4.9 Score=32.29 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=42.4
Q ss_pred CCcEEEEEcCcCcc--hhhHHHHHHHHHHCC-CcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 257 LDPILVVVGGSDLL--KDRAEDYAKTLKNFG-KKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 257 ~~P~lii~G~~D~~--~~~~~~~~~~l~~~g-~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
.+++|-|=||+|-+ .-|+..-.+-..... .....++.+|+|| +.++++ ..=.+++...+.+|+.+|
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GH-YGlF~G-~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGH-YGLFNG-SRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCe-eecccc-hhhhhhhhHHHHHHHHhC
Confidence 45888899999933 334433332222221 2347788899999 666663 233568888999999865
No 241
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=78.21 E-value=35 Score=29.88 Aligned_cols=141 Identities=14% Similarity=0.148 Sum_probs=72.0
Q ss_pred EecCCCCeEEEEEccCCCCCCCCcEEEEEcCCccccCCCCCCcchhHH----------HHHhhcCCcEEEeecCCCCCCC
Q 020406 52 VFDPVHDLSLRLYKPALPVSTKLPIFYYIHGGGFCIGSRTWPNCQNYC----------FKLASELQAVIISPDYRLAPEN 121 (326)
Q Consensus 52 ~~~~~~~~~~~~~~P~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~----------~~la~~~g~~vi~~d~r~~~~~ 121 (326)
.+.++....-.+|+.....+..+|..+++.||....+. ....+++.- ..... -..++.+|-+.....
T Consensus 9 ~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSst-G~GNFeE~GPl~~~~~~r~~TWlk--~adllfvDnPVGaGf 85 (414)
T KOG1283|consen 9 DVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASST-GFGNFEELGPLDLDGSPRDWTWLK--DADLLFVDNPVGAGF 85 (414)
T ss_pred eeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCc-CccchhhcCCcccCCCcCCchhhh--hccEEEecCCCcCce
Confidence 33444445556666554444678999999997443221 110111110 01111 235566676643332
Q ss_pred CC-------chHHHHH-HHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhC-CCCCCCcceeE
Q 020406 122 RL-------PAAIEDG-YMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAG-SLELAPVRVKG 192 (326)
Q Consensus 122 ~~-------~~~~~d~-~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~-~~~~~~~~i~~ 192 (326)
+| ....+.+ .+.+++++....... .....+++|+-.|+||-+|..++....-. .+..-...+.+
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~-------e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~ 158 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHP-------EFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIG 158 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCc-------cccccceEEEEhhcccchhhhhhhhHHHHHhcCceeeccee
Confidence 22 2112221 234444444433322 24457899999999999999988751001 11111245778
Q ss_pred EEEeccccCC
Q 020406 193 YILLAPFFGG 202 (326)
Q Consensus 193 ~il~~p~~~~ 202 (326)
++|-.++++.
T Consensus 159 VaLGDSWISP 168 (414)
T KOG1283|consen 159 VALGDSWISP 168 (414)
T ss_pred EEccCcccCh
Confidence 8887776543
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.78 E-value=9.6 Score=36.02 Aligned_cols=24 Identities=29% Similarity=0.394 Sum_probs=20.2
Q ss_pred cCCCcEEEeecChhHHHHHHHHHH
Q 020406 154 ADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 154 ~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.|...|+-+||||||.++=.+...
T Consensus 523 G~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 523 GDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred CCCCceEEEecccchHHHHHHHHH
Confidence 345789999999999999888776
No 243
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=76.30 E-value=14 Score=32.81 Aligned_cols=43 Identities=16% Similarity=0.083 Sum_probs=31.6
Q ss_pred CCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 155 DFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 155 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
...+|.++|||+|+-+...++.. +..+ .....|+.++++....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~--L~~~-~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLE--LAER-KAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHH--HHhc-cccCeEeeEEEecCCC
Confidence 34679999999999999998877 3333 2235688888887544
No 244
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=75.81 E-value=11 Score=25.18 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 126 AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 126 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
....+..-++|+++.... -.+.++.|+|-|.|=.+|...+..
T Consensus 19 C~~~V~~qI~yvk~~~~~----------~GpK~VLViGaStGyGLAsRIa~a 60 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKI----------NGPKKVLVIGASTGYGLASRIAAA 60 (78)
T ss_dssp HHHHHHHHHHHHHHC-------------TS-SEEEEES-SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC----------CCCceEEEEecCCcccHHHHHHHH
Confidence 466788889999886533 345899999999999999888766
No 245
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=75.48 E-value=53 Score=28.43 Aligned_cols=66 Identities=14% Similarity=0.149 Sum_probs=42.1
Q ss_pred CcEEEEEcCcCcc--hhhHHHHHHHHHHCCC-cEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 258 DPILVVVGGSDLL--KDRAEDYAKTLKNFGK-KVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 258 ~P~lii~G~~D~~--~~~~~~~~~~l~~~g~-~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
.-++-+-||+|-. .-|.+.-.+....... ..+...-++.|| +..++ ...-.+++...+.+|+.++.
T Consensus 340 ~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGH-YGVFn-Gsrfr~eIvPri~dFI~~~d 408 (415)
T COG4553 340 VALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGH-YGVFN-GSRFREEIVPRIRDFIRRYD 408 (415)
T ss_pred eeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCc-cceec-cchHHHHHHHHHHHHHHHhC
Confidence 3678899999922 4444433332222111 126778899999 55555 34556788999999998874
No 246
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=72.76 E-value=27 Score=29.92 Aligned_cols=90 Identities=20% Similarity=0.148 Sum_probs=51.5
Q ss_pred HHHHHhhcCCcEEEeecCCCCCCC-----CCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHH
Q 020406 98 YCFKLASELQAVIISPDYRLAPEN-----RLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAH 172 (326)
Q Consensus 98 ~~~~la~~~g~~vi~~d~r~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~ 172 (326)
.++.+... .++++++.|..-|.- .-....+-....++-+......+.+ -+.-|++|+|.|+|++-+.
T Consensus 53 a~E~l~~G-D~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~-------~~RPkL~l~GeSLGa~g~~ 124 (289)
T PF10081_consen 53 ALEYLYGG-DVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPE-------DRRPKLYLYGESLGAYGGE 124 (289)
T ss_pred HHHHHhCC-CeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCc-------ccCCeEEEeccCccccchh
Confidence 34555444 588888888754421 1112233334455555555444332 2346899999999998776
Q ss_pred HHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 173 NLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 173 ~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
..... ...-...+.|++...|..
T Consensus 125 ~af~~-----~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 125 AAFDG-----LDDLRDRVDGALWVGPPF 147 (289)
T ss_pred hhhcc-----HHHhhhhcceEEEeCCCC
Confidence 65422 011236688888877643
No 247
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=71.55 E-value=6.9 Score=35.33 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=41.4
Q ss_pred CcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHh
Q 020406 258 DPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFI 321 (326)
Q Consensus 258 ~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl 321 (326)
..+|+|.|++|+.....-. +.+...+....+.||++|+-.+..-..++..++...+.+|.
T Consensus 352 ~rmlFVYG~nDPW~A~~f~----l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAEPFR----LGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred CeEEEEeCCCCCcccCccc----cCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 3899999999977543321 11223466778889999976654433467778888999885
No 248
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=62.82 E-value=27 Score=24.84 Aligned_cols=49 Identities=16% Similarity=0.235 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 273 RAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 273 ~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
.+..|.+.|+..|.++++... +.++ +.++-.+.++..++...+..|+..
T Consensus 12 ~AqaF~DYl~sqgI~~~i~~~-~~~~-~~lwl~de~~~~~a~~el~~Fl~n 60 (101)
T PF12122_consen 12 AAQAFIDYLASQGIELQIEPE-GQGQ-FALWLHDEEHLEQAEQELEEFLQN 60 (101)
T ss_dssp HHHHHHHHHHHTT--EEEE-S-SSE---EEEES-GGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCeEEEEEC-CCCc-eEEEEeCHHHHHHHHHHHHHHHHC
Confidence 567799999999977776663 3343 344333557778888899999865
No 249
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=62.44 E-value=15 Score=24.23 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEee
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISP 113 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~ 113 (326)
...|.++++|||.- .| -...+.+.|.+.|+.++.+
T Consensus 29 ~~~~~~~lvhGga~-~G------aD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 29 ARHPDMVLVHGGAP-KG------ADRIAARWARERGVPVIRF 63 (71)
T ss_pred HhCCCEEEEECCCC-CC------HHHHHHHHHHHCCCeeEEe
Confidence 34588999998721 12 4467888998889877653
No 250
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=61.65 E-value=7.8 Score=35.18 Aligned_cols=63 Identities=25% Similarity=0.397 Sum_probs=39.9
Q ss_pred cEEEEEcCcCcchhh-HHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 259 PILVVVGGSDLLKDR-AEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 259 P~lii~G~~D~~~~~-~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
|++|+.|..|...++ ...+.+.+...|...-....||.|+.... +..+....+...+++||.+
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~--~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKW--PLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT---S-S-CCHHHHHHHHHHHH
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccC--CCCcCHHHHHHHHHHHHhc
Confidence 999999999965544 44455667888988889999999985321 1223446788899999865
No 251
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=60.79 E-value=27 Score=27.14 Aligned_cols=67 Identities=15% Similarity=0.188 Sum_probs=42.7
Q ss_pred cEEEEEcCcC-cchhhHHHHHHHHHHCCCcEEEEEeCCC-----ceeeeecCCCCHHHHHHHHHHHHHhhhcC
Q 020406 259 PILVVVGGSD-LLKDRAEDYAKTLKNFGKKVEYVEFEGK-----QHGFFTIDPNSEDANRLMQIIKHFIAENS 325 (326)
Q Consensus 259 P~lii~G~~D-~~~~~~~~~~~~l~~~g~~~~l~~~~~~-----~H~~~~~~~~~~~~~~~~~~~~~fl~~~~ 325 (326)
.+||+.+++| -...-++.++..|++.|..|++.-.... .|.-...-.-.=....+.+.+.+|+++|.
T Consensus 2 k~LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~dl~~~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~~ 74 (175)
T COG4635 2 KTLILYSTRDGQTRKIAEYIASHLRESGIQVDIQDLHAVEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKHA 74 (175)
T ss_pred ceEEEEecCCCcHHHHHHHHHHHhhhcCCeeeeeehhhhhccChhhCceEEEecchhhhhhHHHHHHHHHHHH
Confidence 5899999999 5666788899999988877776544332 22100000111234567778888887763
No 252
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=55.66 E-value=71 Score=33.55 Aligned_cols=96 Identities=21% Similarity=0.241 Sum_probs=56.2
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCc-hHHHHHHH-HHHHHHHHhhcCCCCcc
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLP-AAIEDGYM-AVKWLQAQAVANEPDTW 149 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~-~~~~d~~~-~~~~l~~~~~~~~~~~~ 149 (326)
...|.+.|+|-= .| +...+..++++.-+..+...+. ...| +.+++++. .|+.+++..+.
T Consensus 2121 se~~~~Ffv~pI---EG------~tt~l~~la~rle~PaYglQ~T----~~vP~dSies~A~~yirqirkvQP~------ 2181 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPI---EG------FTTALESLASRLEIPAYGLQCT----EAVPLDSIESLAAYYIRQIRKVQPE------ 2181 (2376)
T ss_pred ccCCceEEEecc---cc------chHHHHHHHhhcCCcchhhhcc----ccCCcchHHHHHHHHHHHHHhcCCC------
Confidence 466889999941 22 3345677777755444433322 1111 23555444 44455544322
Q ss_pred cccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccc
Q 020406 150 LTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPF 199 (326)
Q Consensus 150 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~ 199 (326)
...-++|.|+|..++..+|... .. ......+|++.+.
T Consensus 2182 -------GPYrl~GYSyG~~l~f~ma~~L--qe----~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2182 -------GPYRLAGYSYGACLAFEMASQL--QE----QQSPAPLILLDGS 2218 (2376)
T ss_pred -------CCeeeeccchhHHHHHHHHHHH--Hh----hcCCCcEEEecCc
Confidence 5788999999999999998761 11 1334448888753
No 253
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=51.95 E-value=39 Score=31.52 Aligned_cols=61 Identities=13% Similarity=0.205 Sum_probs=42.7
Q ss_pred cEEEEEcCcC--cchhhHHHHHHHHHH-----------------C----C-----C-----cEEEEEeCCCceeeeecCC
Q 020406 259 PILVVVGGSD--LLKDRAEDYAKTLKN-----------------F----G-----K-----KVEYVEFEGKQHGFFTIDP 305 (326)
Q Consensus 259 P~lii~G~~D--~~~~~~~~~~~~l~~-----------------~----g-----~-----~~~l~~~~~~~H~~~~~~~ 305 (326)
++||.+|+.| +...-.+++.+.|+= . | . +..+..+.++||....
T Consensus 366 kVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~--- 442 (462)
T PTZ00472 366 RVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPM--- 442 (462)
T ss_pred eEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChh---
Confidence 9999999999 444455556555540 0 1 2 4667778899994432
Q ss_pred CCHHHHHHHHHHHHHhhhc
Q 020406 306 NSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 306 ~~~~~~~~~~~~~~fl~~~ 324 (326)
++++.+.+.+.+|+...
T Consensus 443 --d~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 443 --DQPAVALTMINRFLRNR 459 (462)
T ss_pred --hHHHHHHHHHHHHHcCC
Confidence 57889999999999754
No 254
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=51.88 E-value=22 Score=32.23 Aligned_cols=97 Identities=22% Similarity=0.160 Sum_probs=60.8
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCC----------CchHHHHHHHHHHHHHHHh
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENR----------LPAAIEDGYMAVKWLQAQA 141 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~----------~~~~~~d~~~~~~~l~~~~ 141 (326)
..+|+|++--|.+-.. +.. .. -..+|.. -+-+.++||....+. ..+...|.-.+++-++...
T Consensus 61 ~drPtV~~T~GY~~~~-~p~---r~-Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY 132 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVST-SPR---RS-EPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY 132 (448)
T ss_pred CCCCeEEEecCccccc-Ccc---cc-chhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc
Confidence 5679999988643321 111 22 2334443 455677888543321 2234556666666665543
Q ss_pred hcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 142 VANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 142 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
+.+.+--|.|-||+.++..=.. +|..+.+.|..-.
T Consensus 133 --------------~~kWISTG~SKGGmTa~y~rrF--------yP~DVD~tVaYVA 167 (448)
T PF05576_consen 133 --------------PGKWISTGGSKGGMTAVYYRRF--------YPDDVDGTVAYVA 167 (448)
T ss_pred --------------cCCceecCcCCCceeEEEEeee--------CCCCCCeeeeeec
Confidence 3689999999999988766555 8999999997643
No 255
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=47.79 E-value=23 Score=29.53 Aligned_cols=24 Identities=25% Similarity=0.069 Sum_probs=19.7
Q ss_pred cCCCcEEEeecChhHHHHHHHHHH
Q 020406 154 ADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 154 ~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
+.++.-.+.|-|+|+.++..++..
T Consensus 26 i~~~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 26 VINETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred CCCCCCEEEEEcHHHHHHHHHHcC
Confidence 444456899999999999999975
No 256
>COG4425 Predicted membrane protein [Function unknown]
Probab=47.60 E-value=53 Score=30.20 Aligned_cols=81 Identities=15% Similarity=0.122 Sum_probs=42.7
Q ss_pred EEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCC---------CCCCCCchHHHHHHHHHHHHHHHhhcCCC
Q 020406 76 IFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRL---------APENRLPAAIEDGYMAVKWLQAQAVANEP 146 (326)
Q Consensus 76 ~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~---------~~~~~~~~~~~d~~~~~~~l~~~~~~~~~ 146 (326)
+|+.--|.||+... -...++.|... .++.+++.|.. .+++.....-.=..+++.+..+..+
T Consensus 324 vVv~~TGTGWIdp~-----a~~t~EyL~~G-d~asVsmQYSyL~SwLSllvdpdyg~~aa~aLf~aVy~yw~qLP~---- 393 (588)
T COG4425 324 VVVTSTGTGWIDPA-----AADTLEYLYNG-DVASVSMQYSYLPSWLSLLVDPDYGADAARALFEAVYGYWTQLPK---- 393 (588)
T ss_pred EEEcCCCCCCCCHH-----HHhHHHHHhCC-ceEEEEEehhhHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhCCc----
Confidence 33444566665322 12344555443 57778888772 2222221111112334455554442
Q ss_pred CcccccccCCCcEEEeecChhHHHHHH
Q 020406 147 DTWLTEVADFGKVFISGDSAGGNIAHN 173 (326)
Q Consensus 147 ~~~~~~~~d~~~i~l~G~S~GG~~a~~ 173 (326)
-...|+++.|.|+|++-...
T Consensus 394 -------~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 394 -------SSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred -------CCCCceEEeccccccccCcc
Confidence 23368999999999876654
No 257
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=44.36 E-value=75 Score=25.33 Aligned_cols=64 Identities=25% Similarity=0.375 Sum_probs=42.2
Q ss_pred chhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHH
Q 020406 95 CQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNL 174 (326)
Q Consensus 95 ~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 174 (326)
...+...+...-|+++.+|.|-.+ +|..+. .+++|+.... ..-.++.+++.|.|+.-....
T Consensus 58 v~~~~~~i~~aD~li~~tPeYn~s----~pg~lK---naiD~l~~~~------------~~~Kpv~~~~~s~g~~~~~~a 118 (184)
T COG0431 58 VQALREAIAAADGLIIATPEYNGS----YPGALK---NAIDWLSREA------------LGGKPVLLLGTSGGGAGGLRA 118 (184)
T ss_pred HHHHHHHHHhCCEEEEECCccCCC----CCHHHH---HHHHhCCHhH------------hCCCcEEEEecCCCchhHHHH
Confidence 345666677777899999988654 444444 6777776652 223677888888887776655
Q ss_pred HHH
Q 020406 175 AVR 177 (326)
Q Consensus 175 a~~ 177 (326)
..+
T Consensus 119 ~~~ 121 (184)
T COG0431 119 QNQ 121 (184)
T ss_pred HHH
Confidence 543
No 258
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=44.00 E-value=26 Score=32.32 Aligned_cols=51 Identities=16% Similarity=0.171 Sum_probs=28.0
Q ss_pred CCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHH
Q 020406 257 LDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANR 312 (326)
Q Consensus 257 ~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~ 312 (326)
...+++.+|+.|+...-+ ........+...++||+.|..++..+...+.++
T Consensus 376 ~tnviFtNG~~DPW~~lg-----v~~~~~~~~~~~~I~g~~Hc~Dl~~~~~~D~~~ 426 (434)
T PF05577_consen 376 ATNVIFTNGELDPWRALG-----VTSDSSDSVPAIVIPGGAHCSDLYPPNPNDPPE 426 (434)
T ss_dssp --SEEEEEETT-CCGGGS-------S-SSSSEEEEEETT--TTGGGS---TT--HH
T ss_pred CCeEEeeCCCCCCccccc-----CCCCCCCCcccEEECCCeeeccccCCCCCCCHH
Confidence 348999999999776555 112234456678899999988877655444433
No 259
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=41.64 E-value=20 Score=32.52 Aligned_cols=60 Identities=18% Similarity=0.284 Sum_probs=39.6
Q ss_pred CcEEEEEcCcC--cchhhHHHHHHHHHHCC----------------------CcEEEEEeCCCceeeeecCCCCHHHHHH
Q 020406 258 DPILVVVGGSD--LLKDRAEDYAKTLKNFG----------------------KKVEYVEFEGKQHGFFTIDPNSEDANRL 313 (326)
Q Consensus 258 ~P~lii~G~~D--~~~~~~~~~~~~l~~~g----------------------~~~~l~~~~~~~H~~~~~~~~~~~~~~~ 313 (326)
-++||.+|..| ++...++...+.|.-.+ .+.++..+.++||.... ++++..
T Consensus 331 irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~-----dqP~~a 405 (415)
T PF00450_consen 331 IRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ-----DQPEAA 405 (415)
T ss_dssp -EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH-----HSHHHH
T ss_pred ceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh-----hCHHHH
Confidence 39999999999 44555666666654111 23678999999995443 467888
Q ss_pred HHHHHHHhh
Q 020406 314 MQIIKHFIA 322 (326)
Q Consensus 314 ~~~~~~fl~ 322 (326)
+..+.+||+
T Consensus 406 ~~m~~~fl~ 414 (415)
T PF00450_consen 406 LQMFRRFLK 414 (415)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999999985
No 260
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=39.82 E-value=38 Score=26.57 Aligned_cols=18 Identities=33% Similarity=0.429 Sum_probs=16.3
Q ss_pred EEeecChhHHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~~ 177 (326)
.+.|-|.|+.+|..++..
T Consensus 31 ~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 31 IVSGTSAGAIVGALYAAG 48 (175)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 799999999999999864
No 261
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=39.76 E-value=1.1e+02 Score=25.74 Aligned_cols=62 Identities=15% Similarity=0.164 Sum_probs=33.8
Q ss_pred CCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 257 LDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 257 ~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
.+|++++||-.+. +..+...++......+++.++--||+...........+.+.+.+.+|++
T Consensus 25 ~~plvllHG~~~~----~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~ 86 (276)
T TIGR02240 25 LTPLLIFNGIGAN----LELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLD 86 (276)
T ss_pred CCcEEEEeCCCcc----hHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHH
Confidence 3599999996652 1222223333334568888888889765322111123455555555554
No 262
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=39.56 E-value=72 Score=28.05 Aligned_cols=60 Identities=13% Similarity=0.260 Sum_probs=43.3
Q ss_pred cEEEEEcCcC--cchhhHHHHHHHHHHC---------------C-----Cc-EEEEEeCCCceeeeecCCCCHHHHHHHH
Q 020406 259 PILVVVGGSD--LLKDRAEDYAKTLKNF---------------G-----KK-VEYVEFEGKQHGFFTIDPNSEDANRLMQ 315 (326)
Q Consensus 259 P~lii~G~~D--~~~~~~~~~~~~l~~~---------------g-----~~-~~l~~~~~~~H~~~~~~~~~~~~~~~~~ 315 (326)
++||..|..| +.....+.+.+.|.-. | .+ .++..+-++||.- . .+++..+.
T Consensus 235 ~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV-~-----~qP~~al~ 308 (319)
T PLN02213 235 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA-E-----YRPNETFI 308 (319)
T ss_pred eEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCC-C-----cCHHHHHH
Confidence 9999999999 5555666777776511 1 12 6777888999944 2 25788899
Q ss_pred HHHHHhhhc
Q 020406 316 IIKHFIAEN 324 (326)
Q Consensus 316 ~~~~fl~~~ 324 (326)
.+.+||...
T Consensus 309 m~~~fi~~~ 317 (319)
T PLN02213 309 MFQRWISGQ 317 (319)
T ss_pred HHHHHHcCC
Confidence 999998764
No 263
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=38.75 E-value=86 Score=25.92 Aligned_cols=14 Identities=21% Similarity=0.133 Sum_probs=9.8
Q ss_pred CCcEEEeecChhHHH
Q 020406 156 FGKVFISGDSAGGNI 170 (326)
Q Consensus 156 ~~~i~l~G~S~GG~~ 170 (326)
...+.|+|.| ||..
T Consensus 128 ~KpvaivgaS-gg~~ 141 (219)
T TIGR02690 128 GKTLAVMQVS-GGSQ 141 (219)
T ss_pred CCcEEEEEeC-CcHh
Confidence 3678999998 4433
No 264
>PLN02209 serine carboxypeptidase
Probab=36.31 E-value=97 Score=28.71 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCC--CCCCCcceeEEEEeccccCCc
Q 020406 128 EDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGS--LELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 128 ~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~--~~~~~~~i~~~il~~p~~~~~ 203 (326)
+++.+.+++|+.-...++ .....+++|+|.|+||+-+-.+|....... .....-.++|+++.+|+++..
T Consensus 145 ~~a~~~~~fl~~f~~~~p-------~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~ 215 (437)
T PLN02209 145 SEVKKIHEFLQKWLIKHP-------QFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIE 215 (437)
T ss_pred HHHHHHHHHHHHHHHhCc-------cccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChh
Confidence 344555555555443333 233368999999999998888876521010 112245789999999988754
No 265
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=36.13 E-value=21 Score=30.36 Aligned_cols=15 Identities=33% Similarity=0.552 Sum_probs=12.7
Q ss_pred CCCcEEEeecChhHH
Q 020406 155 DFGKVFISGDSAGGN 169 (326)
Q Consensus 155 d~~~i~l~G~S~GG~ 169 (326)
+.+.|+|+|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 458999999999864
No 266
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.85 E-value=48 Score=27.39 Aligned_cols=18 Identities=39% Similarity=0.386 Sum_probs=16.2
Q ss_pred EEeecChhHHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~~ 177 (326)
.+.|-|+|+.+|+.++..
T Consensus 31 ~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 31 AISGTSAGALVGGLFASG 48 (221)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 699999999999999864
No 267
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=34.49 E-value=1.2e+02 Score=25.36 Aligned_cols=18 Identities=33% Similarity=0.198 Sum_probs=14.2
Q ss_pred cEEEeecChhHHHHHHHH
Q 020406 158 KVFISGDSAGGNIAHNLA 175 (326)
Q Consensus 158 ~i~l~G~S~GG~~a~~~a 175 (326)
-..++|.|+|+.++....
T Consensus 113 G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 113 GTPYIGWSAGANVAGPTI 130 (233)
T ss_pred CCEEEEECHHHHhhhccc
Confidence 478999999998865543
No 268
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=34.36 E-value=1e+02 Score=28.57 Aligned_cols=46 Identities=24% Similarity=0.362 Sum_probs=34.5
Q ss_pred CCcEEEeecChhHHHHHHHHHHHHhCCC----CCCCcceeEEEEeccccCCc
Q 020406 156 FGKVFISGDSAGGNIAHNLAVRLKAGSL----ELAPVRVKGYILLAPFFGGT 203 (326)
Q Consensus 156 ~~~i~l~G~S~GG~~a~~~a~~~~~~~~----~~~~~~i~~~il~~p~~~~~ 203 (326)
..+++|+|.|+||..+..+|.+. ... ...+-.++|+++.+|+++..
T Consensus 164 ~~~~yi~GESYaG~yvP~la~~i--~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALVQEI--SQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred CCCEEEEccCccceehHHHHHHH--HhhcccccCCcccceeeEecCCCcCch
Confidence 36899999999999888888762 111 12345799999999987664
No 269
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=34.32 E-value=1.2e+02 Score=28.22 Aligned_cols=61 Identities=13% Similarity=0.186 Sum_probs=41.0
Q ss_pred cEEEEEcCcC--cchhhHHHHHHHHHHCC---------------------CcEEEEEeCCCceeeeecCCCCHHHHHHHH
Q 020406 259 PILVVVGGSD--LLKDRAEDYAKTLKNFG---------------------KKVEYVEFEGKQHGFFTIDPNSEDANRLMQ 315 (326)
Q Consensus 259 P~lii~G~~D--~~~~~~~~~~~~l~~~g---------------------~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~ 315 (326)
+++|..|+.| ++.-..+...+.|.-.. .+..+..+.|+||..... ++++.+.
T Consensus 365 rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~-----~p~~al~ 439 (454)
T KOG1282|consen 365 RVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYD-----KPESALI 439 (454)
T ss_pred EEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCC-----CcHHHHH
Confidence 8999999999 55555555555544211 114567788999955443 4577888
Q ss_pred HHHHHhhhc
Q 020406 316 IIKHFIAEN 324 (326)
Q Consensus 316 ~~~~fl~~~ 324 (326)
.+..||..+
T Consensus 440 m~~~fl~g~ 448 (454)
T KOG1282|consen 440 MFQRFLNGQ 448 (454)
T ss_pred HHHHHHcCC
Confidence 889998764
No 270
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=34.30 E-value=48 Score=30.53 Aligned_cols=22 Identities=36% Similarity=0.306 Sum_probs=18.5
Q ss_pred cCCCcEEEeecChhHHHHHHHHHH
Q 020406 154 ADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 154 ~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
+.++ +|.|-|+|+.+|+.++.+
T Consensus 100 l~p~--vIsGTSaGAivAal~as~ 121 (421)
T cd07230 100 LLPR--IISGSSAGSIVAAILCTH 121 (421)
T ss_pred CCCC--EEEEECHHHHHHHHHHcC
Confidence 4443 799999999999999876
No 271
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=33.02 E-value=2.8e+02 Score=22.91 Aligned_cols=34 Identities=26% Similarity=0.475 Sum_probs=24.9
Q ss_pred CcEEEEEcCcC---cchhhHHHHHHHHHHCCCcEEEE
Q 020406 258 DPILVVVGGSD---LLKDRAEDYAKTLKNFGKKVEYV 291 (326)
Q Consensus 258 ~P~lii~G~~D---~~~~~~~~~~~~l~~~g~~~~l~ 291 (326)
-|.+++.|++= .--++...+-..+.++|-+++.+
T Consensus 199 ~PlMlvAG~Ha~nDMasddedswk~il~~~G~~v~~~ 235 (265)
T COG4822 199 IPLMLVAGDHAKNDMASDDEDSWKNILEKNGFKVEVY 235 (265)
T ss_pred eeeEEeechhhhhhhcccchHHHHHHHHhCCceeEEE
Confidence 39999988754 55555677888899999877433
No 272
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=32.86 E-value=1.9e+02 Score=26.57 Aligned_cols=65 Identities=22% Similarity=0.250 Sum_probs=37.1
Q ss_pred CcEEEEEcCcCcc-hhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhhc
Q 020406 258 DPILVVVGGSDLL-KDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAEN 324 (326)
Q Consensus 258 ~P~lii~G~~D~~-~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~~ 324 (326)
.|++|++|..|.. .+.-..+++.+.+.|-.+-..-++ ||+.....+...........+++||.+.
T Consensus 194 ~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~p--G~G~s~~~~~~~d~~~~~~avld~l~~~ 259 (414)
T PRK05077 194 FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMP--SVGFSSKWKLTQDSSLLHQAVLNALPNV 259 (414)
T ss_pred ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCC--CCCCCCCCCccccHHHHHHHHHHHHHhC
Confidence 3999999998843 233445677787777655444455 4543321111123344456778887653
No 273
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=32.83 E-value=34 Score=30.01 Aligned_cols=17 Identities=41% Similarity=0.634 Sum_probs=15.6
Q ss_pred EEeecChhHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAV 176 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~ 176 (326)
.|.|-|+||.+|+.++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 58999999999999985
No 274
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=32.73 E-value=60 Score=27.36 Aligned_cols=17 Identities=47% Similarity=0.436 Sum_probs=15.7
Q ss_pred EeecChhHHHHHHHHHH
Q 020406 161 ISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 161 l~G~S~GG~~a~~~a~~ 177 (326)
+.|-|+|+.+|..++..
T Consensus 34 i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 34 ISGASAGALAACCLLCD 50 (245)
T ss_pred EEEEcHHHHHHHHHHhC
Confidence 99999999999999865
No 275
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=31.17 E-value=61 Score=25.83 Aligned_cols=19 Identities=37% Similarity=0.352 Sum_probs=16.9
Q ss_pred EEEeecChhHHHHHHHHHH
Q 020406 159 VFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 159 i~l~G~S~GG~~a~~~a~~ 177 (326)
=.+.|-|+||.+|+.++..
T Consensus 29 d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 29 KRVAGTSAGAITAALLALG 47 (194)
T ss_pred ceEEEECHHHHHHHHHHcC
Confidence 5799999999999999864
No 276
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=30.45 E-value=1e+02 Score=25.38 Aligned_cols=43 Identities=7% Similarity=-0.133 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCC
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRL 117 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~ 117 (326)
++.+.|.|+.=. ..+.....|..-.+....+.|+.+...+...
T Consensus 30 g~~~~i~FIPtA---s~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~ 72 (224)
T COG3340 30 GKRKTIAFIPTA---SVDSEDDFYVEKVRNALAKLGLEVSELHLSK 72 (224)
T ss_pred CCCceEEEEecC---ccccchHHHHHHHHHHHHHcCCeeeeeeccC
Confidence 446788888732 3333322244445555566698888776543
No 277
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=30.37 E-value=61 Score=27.90 Aligned_cols=34 Identities=18% Similarity=0.341 Sum_probs=26.0
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCC
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLA 118 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~ 118 (326)
...|.|+|.-|+|+ .+.+++.. ||.|+..|....
T Consensus 250 ~~vPmi~fakG~g~------------~Le~l~~t-G~DVvgLDWTvd 283 (359)
T KOG2872|consen 250 APVPMILFAKGSGG------------ALEELAQT-GYDVVGLDWTVD 283 (359)
T ss_pred CCCceEEEEcCcch------------HHHHHHhc-CCcEEeeccccc
Confidence 35699999998744 35777766 999999997643
No 278
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=30.06 E-value=1.5e+02 Score=23.07 Aligned_cols=36 Identities=17% Similarity=0.002 Sum_probs=20.9
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecccc
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFF 200 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~ 200 (326)
.+|+++|-|..|..-+.++-. .+..|..++-.+|.-
T Consensus 69 k~I~~yGA~~kg~tlln~~g~--------~~~~I~~vvD~np~K 104 (160)
T PF08484_consen 69 KRIAGYGAGAKGNTLLNYFGL--------DNDLIDYVVDDNPLK 104 (160)
T ss_dssp --EEEE---SHHHHHHHHHT----------TTTS--EEES-GGG
T ss_pred CEEEEECcchHHHHHHHHhCC--------CcceeEEEEeCChhh
Confidence 689999999999988888754 346688888877744
No 279
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.27 E-value=36 Score=26.53 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=26.1
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
++|.++.+|||-++|-.+... -+++..+.+++
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg----------~~lksatAiNG 88 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQG----------IRLKSATAING 88 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhh----------ccccceeeecC
Confidence 578899999999999988855 67777777765
No 280
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=29.10 E-value=18 Score=32.53 Aligned_cols=21 Identities=29% Similarity=0.340 Sum_probs=17.2
Q ss_pred CCcEEEeecChhHHHHHHHHH
Q 020406 156 FGKVFISGDSAGGNIAHNLAV 176 (326)
Q Consensus 156 ~~~i~l~G~S~GG~~a~~~a~ 176 (326)
.++|..+|||.||.++..+..
T Consensus 149 i~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred cceeeeeeeecCCeeeeEEEE
Confidence 479999999999988765543
No 281
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=29.07 E-value=73 Score=24.94 Aligned_cols=20 Identities=40% Similarity=0.380 Sum_probs=17.5
Q ss_pred cEEEeecChhHHHHHHHHHH
Q 020406 158 KVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 158 ~i~l~G~S~GG~~a~~~a~~ 177 (326)
.-.+.|-|+|+.++..++..
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred CCEEEEECHHHHHHHHHHcC
Confidence 45689999999999999865
No 282
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.62 E-value=63 Score=27.19 Aligned_cols=17 Identities=35% Similarity=0.376 Sum_probs=15.4
Q ss_pred EEeecChhHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAV 176 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~ 176 (326)
.+.|-|+|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999973
No 283
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=28.29 E-value=1.2e+02 Score=26.41 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHH
Q 020406 126 AIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 126 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
+-..+..-|+|++...+. .-.|.||.|+|-|.|=.+|.+.++.
T Consensus 20 Ce~nV~~QI~y~k~~gp~---------~ngPKkVLviGaSsGyGLa~RIsaa 62 (398)
T COG3007 20 CEANVLQQIDYVKAAGPI---------KNGPKKVLVIGASSGYGLAARISAA 62 (398)
T ss_pred HHHHHHHHHHHHHhcCCc---------cCCCceEEEEecCCcccHHHHHHHH
Confidence 355677788899887643 2467899999999999999998877
No 284
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=28.13 E-value=1.4e+02 Score=21.96 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=10.9
Q ss_pred CCCcEEEEEcCCccc
Q 020406 72 TKLPIFYYIHGGGFC 86 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~ 86 (326)
.+..++|++||.-|.
T Consensus 54 ~~~klaIfVDGcfWH 68 (117)
T TIGR00632 54 DEYRCVIFIHGCFWH 68 (117)
T ss_pred cCCCEEEEEcccccc
Confidence 355799999986444
No 285
>PRK10279 hypothetical protein; Provisional
Probab=27.25 E-value=75 Score=27.73 Aligned_cols=20 Identities=20% Similarity=0.228 Sum_probs=17.0
Q ss_pred cEEEeecChhHHHHHHHHHH
Q 020406 158 KVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 158 ~i~l~G~S~GG~~a~~~a~~ 177 (326)
--.|.|-|+|+.++..+|..
T Consensus 34 ~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcC
Confidence 35689999999999999854
No 286
>PLN02578 hydrolase
Probab=25.46 E-value=1.8e+02 Score=25.80 Aligned_cols=62 Identities=18% Similarity=0.095 Sum_probs=33.5
Q ss_pred CcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 258 DPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 258 ~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
+|++++||-..... .-......+. .......+.--||+..-.....-....+.+.+.+|+++
T Consensus 87 ~~vvliHG~~~~~~-~w~~~~~~l~---~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 87 LPIVLIHGFGASAF-HWRYNIPELA---KKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CeEEEECCCCCCHH-HHHHHHHHHh---cCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHH
Confidence 59999999776211 1112233332 23577777777787653221111234455666676654
No 287
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.36 E-value=3.1e+02 Score=26.04 Aligned_cols=41 Identities=15% Similarity=0.139 Sum_probs=31.0
Q ss_pred CCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEecc
Q 020406 155 DFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAP 198 (326)
Q Consensus 155 d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p 198 (326)
..++|-++|+|.|+-+...++.. +.+ ...-..|..++++..
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~--Lak-kke~~iIEnViL~Ga 485 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLE--LAK-KKEVGIIENVILFGA 485 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHH--Hhh-cccccceeeeeeccC
Confidence 34789999999999999988876 233 223467888888864
No 288
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion]
Probab=25.09 E-value=4.1e+02 Score=23.12 Aligned_cols=46 Identities=17% Similarity=0.176 Sum_probs=25.3
Q ss_pred CCCCCCCCCCCceeeeeEecCCCCeEEEEEccCCC---CCCCCcEEEEEcCC
Q 020406 35 SFSVPVHDDGSVVWKDVVFDPVHDLSLRLYKPALP---VSTKLPIFYYIHGG 83 (326)
Q Consensus 35 ~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~P~~~---~~~~~p~vv~~HGg 83 (326)
|...|..++..+.+.-..++.|+.++ ++.|-+. .+...+ +||+-||
T Consensus 236 Pp~~~~~PpG~mSSyi~sLKpGDKvt--isGPfGEfFaKdtdae-mvFigGG 284 (410)
T COG2871 236 PPRNPDAPPGQMSSYIWSLKPGDKVT--ISGPFGEFFAKDTDAE-MVFIGGG 284 (410)
T ss_pred CCCCCCCCccceeeeEEeecCCCeEE--EeccchhhhhccCCCc-eEEEecC
Confidence 33444456666666666777776544 4556432 223444 5666665
No 289
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=24.62 E-value=1.4e+02 Score=25.67 Aligned_cols=19 Identities=26% Similarity=0.176 Sum_probs=15.8
Q ss_pred CcEEEeecChhHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLA 175 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a 175 (326)
..-.++|||+|-+.|+.++
T Consensus 82 ~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 82 RPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred cccEEEecCHHHHHHHHHh
Confidence 3458999999999998776
No 290
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=24.55 E-value=93 Score=26.12 Aligned_cols=19 Identities=32% Similarity=0.303 Sum_probs=16.9
Q ss_pred EEEeecChhHHHHHHHHHH
Q 020406 159 VFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 159 i~l~G~S~GG~~a~~~a~~ 177 (326)
-.+.|-|+|+.++..++..
T Consensus 33 ~~i~GtSAGAl~aa~~a~g 51 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCG 51 (243)
T ss_pred CEEEEEcHHHHHHHHHHhC
Confidence 3899999999999999865
No 291
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=24.39 E-value=1.8e+02 Score=23.78 Aligned_cols=57 Identities=18% Similarity=0.379 Sum_probs=37.0
Q ss_pred CCchHHHHHHHHHH-HHHHHhhcCCCCcccccccCCCcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEec
Q 020406 122 RLPAAIEDGYMAVK-WLQAQAVANEPDTWLTEVADFGKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLA 197 (326)
Q Consensus 122 ~~~~~~~d~~~~~~-~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~ 197 (326)
..|++..++...++ |+.++... .+...--+|+|.|.-|.-+..++.+ +.|+|...-.
T Consensus 175 atp~QaqEVh~~iR~wl~~~vs~---------~Va~~~RIiYGGSV~g~N~~el~~~----------~diDGFLVGG 232 (247)
T KOG1643|consen 175 ATPEQAQEVHAEIRKWLKSNVSD---------AVASSTRIIYGGSVNGGNCKELAKK----------PDIDGFLVGG 232 (247)
T ss_pred CCHHHHHHHHHHHHHHHhhcchh---------hhhhceEEEeccccccccHHHhccc----------ccccceEEcC
Confidence 34666777666554 77665432 2333456789999988888888865 6677665443
No 292
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=24.30 E-value=65 Score=25.34 Aligned_cols=19 Identities=26% Similarity=0.302 Sum_probs=16.7
Q ss_pred EEEeecChhHHHHHHHHHH
Q 020406 159 VFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 159 i~l~G~S~GG~~a~~~a~~ 177 (326)
=.+.|-|.|+.+|+.++..
T Consensus 30 d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 30 DIIAGSSIGALVGALYAAG 48 (175)
T ss_pred eEEEEeCHHHHHHHHHHcC
Confidence 4689999999999999865
No 293
>KOG4584 consensus Uncharacterized conserved protein [General function prediction only]
Probab=24.14 E-value=77 Score=27.44 Aligned_cols=46 Identities=22% Similarity=0.258 Sum_probs=36.0
Q ss_pred CCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeee
Q 020406 257 LDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFT 302 (326)
Q Consensus 257 ~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~ 302 (326)
..++|++...+|.++-+..++.+.+.....+..+++++|+|-+++.
T Consensus 269 ~~~ll~~~~G~~~pciDlrrvsqeLa~l~~daDLVViEGMGRalhT 314 (348)
T KOG4584|consen 269 TGQLLVVQNGQDSPCIDLRRVSQELAYLSSDADLVVIEGMGRALHT 314 (348)
T ss_pred hcceEEeecCCCCceeeHHhhhHHHHHHhcCCCEEEEeccchhhhh
Confidence 3499999999996666666677777666567799999999987653
No 294
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=24.05 E-value=59 Score=28.34 Aligned_cols=17 Identities=35% Similarity=0.557 Sum_probs=15.3
Q ss_pred EEeecChhHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAV 176 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~ 176 (326)
.|.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999985
No 295
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=24.00 E-value=64 Score=25.12 Aligned_cols=21 Identities=43% Similarity=0.278 Sum_probs=16.7
Q ss_pred CcEEEeecChhHHHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.--.|.|-|.||.+|+.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 345699999999999888864
No 296
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.35 E-value=64 Score=27.85 Aligned_cols=18 Identities=44% Similarity=0.582 Sum_probs=16.3
Q ss_pred EEeecChhHHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~~ 177 (326)
.+.|-|.||.+|+.++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 689999999999999864
No 297
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=23.35 E-value=4.4e+02 Score=22.02 Aligned_cols=67 Identities=21% Similarity=0.181 Sum_probs=45.4
Q ss_pred HHHHHhhcCCcEEEeecCCCCCC-----CCCchHHHHHHHHHHHHHHHhhcCCCCcccccccCCCcEEEeecChhHH---
Q 020406 98 YCFKLASELQAVIISPDYRLAPE-----NRLPAAIEDGYMAVKWLQAQAVANEPDTWLTEVADFGKVFISGDSAGGN--- 169 (326)
Q Consensus 98 ~~~~la~~~g~~vi~~d~r~~~~-----~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~--- 169 (326)
.+..+..+ +..|++.|+-+..+ +..+..++|....++.|++.. +..-.=+++|-+.|+.
T Consensus 102 ~~eklk~~-~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l~~L~e~~------------irvvpHitiGL~~gki~~e 168 (275)
T COG1856 102 DLEKLKEE-LVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSLLLLKENG------------IRVVPHITIGLDFGKIHGE 168 (275)
T ss_pred HHHHHHHh-cCcEEEEeecCChHHHHHHHcCCccHHHHHHHHHHHHHcC------------ceeceeEEEEeccCcccch
Confidence 44555544 78888888775433 234567888888999988775 3334567889999875
Q ss_pred -HHHHHHHH
Q 020406 170 -IAHNLAVR 177 (326)
Q Consensus 170 -~a~~~a~~ 177 (326)
-|..++..
T Consensus 169 ~kaIdiL~~ 177 (275)
T COG1856 169 FKAIDILVN 177 (275)
T ss_pred HHHHHHHhc
Confidence 46666655
No 298
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=23.13 E-value=3.3e+02 Score=24.48 Aligned_cols=78 Identities=13% Similarity=0.169 Sum_probs=44.8
Q ss_pred CcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeec--CCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccc
Q 020406 74 LPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPD--YRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLT 151 (326)
Q Consensus 74 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d--~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 151 (326)
+..|||-|-..+...+....--...+..++..-|.+.+.+. +-.+++ .+.+.|+.+.|+++++..
T Consensus 266 ~APVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnfy~~~isc~~---~A~v~~v~~Hi~hIr~Va---------- 332 (419)
T KOG4127|consen 266 RAPVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNFYPGFISCSD---RATVSDVADHINHIRAVA---------- 332 (419)
T ss_pred cCceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEeecccccCCC---cccHHHHHHHHHHHHHhh----------
Confidence 44588999877644433221123344555544344444332 112322 335899999999999875
Q ss_pred cccCCCcEEEeecChh
Q 020406 152 EVADFGKVFISGDSAG 167 (326)
Q Consensus 152 ~~~d~~~i~l~G~S~G 167 (326)
..++|++.|.=-|
T Consensus 333 ---G~~hIGlGg~yDG 345 (419)
T KOG4127|consen 333 ---GIDHIGLGGDYDG 345 (419)
T ss_pred ---ccceeeccCCcCC
Confidence 2478888775444
No 299
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.73 E-value=66 Score=26.37 Aligned_cols=19 Identities=32% Similarity=0.202 Sum_probs=17.0
Q ss_pred EEEeecChhHHHHHHHHHH
Q 020406 159 VFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 159 i~l~G~S~GG~~a~~~a~~ 177 (326)
=.+.|.|.|+.+|+.++..
T Consensus 28 d~i~GtS~GAl~aa~~a~~ 46 (215)
T cd07209 28 DIISGTSIGAINGALIAGG 46 (215)
T ss_pred CEEEEECHHHHHHHHHHcC
Confidence 3699999999999999975
No 300
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.47 E-value=66 Score=28.69 Aligned_cols=17 Identities=41% Similarity=0.685 Sum_probs=15.7
Q ss_pred EEeecChhHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAV 176 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~ 176 (326)
.|.|-|.||.+|+.++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 68999999999999985
No 301
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=22.44 E-value=7.4e+02 Score=24.24 Aligned_cols=42 Identities=21% Similarity=0.139 Sum_probs=33.9
Q ss_pred CcEEEeecChhHHHHHHHHHHHHhCCCCCCCcceeEEEEeccccCCccc
Q 020406 157 GKVFISGDSAGGNIAHNLAVRLKAGSLELAPVRVKGYILLAPFFGGTVR 205 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~i~~~il~~p~~~~~~~ 205 (326)
.-|+..+.|-||..++..|.++ ....|.|++..-|.+.+...
T Consensus 285 T~VIAssvSNGGgAal~AAEqD-------~~glIdgVvv~EP~v~~~~~ 326 (690)
T PF10605_consen 285 TLVIASSVSNGGGAALAAAEQD-------TQGLIDGVVVSEPNVNLPPD 326 (690)
T ss_pred eEEEEEeecCccHHHHhHhhcc-------cCCceeeEEecCCccCCCCC
Confidence 3467778999999999999884 45789999999998876643
No 302
>PRK10907 intramembrane serine protease GlpG; Provisional
Probab=22.20 E-value=2.8e+02 Score=23.93 Aligned_cols=48 Identities=13% Similarity=0.162 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhhh
Q 020406 272 DRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIAE 323 (326)
Q Consensus 272 ~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~~ 323 (326)
..++.+.+.++..+.++++. ++... ..+-.+.++.+++.+++.+|+++
T Consensus 11 ~~a~~f~dyl~~~~i~~~~~--~~~~~--~lwl~d~~~~~~~~~~~~~f~~~ 58 (276)
T PRK10907 11 RLAQAFVDYMATQGVILTIQ--QHNQS--DIWLADESQAERVRAELARFLEN 58 (276)
T ss_pred HHHHHHHHHHHHCCCcEEEe--cCCce--EEEecCHHHHHHHHHHHHHHHhC
Confidence 46778999999998877766 43322 23333456778888888888865
No 303
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=22.10 E-value=1.3e+02 Score=23.13 Aligned_cols=19 Identities=26% Similarity=0.442 Sum_probs=16.1
Q ss_pred CcEEEeecChhHHHHHHHH
Q 020406 157 GKVFISGDSAGGNIAHNLA 175 (326)
Q Consensus 157 ~~i~l~G~S~GG~~a~~~a 175 (326)
.--.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3456889999999999887
No 304
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=21.84 E-value=74 Score=27.01 Aligned_cols=18 Identities=28% Similarity=0.228 Sum_probs=16.5
Q ss_pred EEeecChhHHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~~ 177 (326)
.+.|-|+|+.+++.++..
T Consensus 30 ~i~GtSaGAi~a~~~~~g 47 (266)
T cd07208 30 LVIGVSAGALNAASYLSG 47 (266)
T ss_pred EEEEECHHHHhHHHHHhC
Confidence 689999999999999876
No 305
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=21.79 E-value=3.5e+02 Score=22.22 Aligned_cols=41 Identities=22% Similarity=0.448 Sum_probs=21.3
Q ss_pred CcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceee
Q 020406 258 DPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGF 300 (326)
Q Consensus 258 ~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~ 300 (326)
+|++++||.-......-..+...+.+.|. +++.+.--||+.
T Consensus 26 ~~vl~~hG~~g~~~~~~~~~~~~l~~~g~--~vi~~d~~G~G~ 66 (288)
T TIGR01250 26 IKLLLLHGGPGMSHEYLENLRELLKEEGR--EVIMYDQLGCGY 66 (288)
T ss_pred CeEEEEcCCCCccHHHHHHHHHHHHhcCC--EEEEEcCCCCCC
Confidence 48999999644222222334445555454 444444444543
No 306
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=21.60 E-value=1.3e+02 Score=23.39 Aligned_cols=17 Identities=24% Similarity=0.133 Sum_probs=11.8
Q ss_pred ccCCCcEEEeecChhHH
Q 020406 153 VADFGKVFISGDSAGGN 169 (326)
Q Consensus 153 ~~d~~~i~l~G~S~GG~ 169 (326)
...|++|.++|.|++..
T Consensus 100 ~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 100 NISPKKISLVGCSLADN 116 (157)
T ss_dssp T--ESEEEEESSS-S-T
T ss_pred CCCCCEEEEEEecccCC
Confidence 36689999999999987
No 307
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=21.55 E-value=1.7e+02 Score=25.76 Aligned_cols=22 Identities=27% Similarity=0.237 Sum_probs=18.3
Q ss_pred CCCcEEEeecChhHHHHHHHHH
Q 020406 155 DFGKVFISGDSAGGNIAHNLAV 176 (326)
Q Consensus 155 d~~~i~l~G~S~GG~~a~~~a~ 176 (326)
+....++.|||+|=+-|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4467899999999999988774
No 308
>PRK04531 acetylglutamate kinase; Provisional
Probab=21.51 E-value=5.4e+02 Score=23.57 Aligned_cols=9 Identities=33% Similarity=0.615 Sum_probs=6.5
Q ss_pred EEEEEcCCc
Q 020406 76 IFYYIHGGG 84 (326)
Q Consensus 76 ~vv~~HGgg 84 (326)
-+|++||||
T Consensus 68 ~~VlVHGgg 76 (398)
T PRK04531 68 TPIVVHGAG 76 (398)
T ss_pred cEEEEECCC
Confidence 467888875
No 309
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=21.06 E-value=72 Score=27.90 Aligned_cols=19 Identities=26% Similarity=0.279 Sum_probs=16.5
Q ss_pred EEEeecChhHHHHHHHHHH
Q 020406 159 VFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 159 i~l~G~S~GG~~a~~~a~~ 177 (326)
=.|.|-|+|+.++..++..
T Consensus 45 d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 45 DMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CEEEEECHHHHHHHHHHcC
Confidence 4589999999999999864
No 310
>PRK10673 acyl-CoA esterase; Provisional
Probab=20.57 E-value=3.1e+02 Score=22.41 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=32.5
Q ss_pred CCcEEEEEcCcCcchhhHHHHHHHHHHCCCcEEEEEeCCCceeeeecCCCCHHHHHHHHHHHHHhh
Q 020406 257 LDPILVVVGGSDLLKDRAEDYAKTLKNFGKKVEYVEFEGKQHGFFTIDPNSEDANRLMQIIKHFIA 322 (326)
Q Consensus 257 ~~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~~~~H~~~~~~~~~~~~~~~~~~~~~fl~ 322 (326)
.+|++++||-.+... .-..++..+.+ ..+.+.++--||+....... -..++..+.+.++++
T Consensus 16 ~~~iv~lhG~~~~~~-~~~~~~~~l~~---~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 16 NSPIVLVHGLFGSLD-NLGVLARDLVN---DHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLD 76 (255)
T ss_pred CCCEEEECCCCCchh-HHHHHHHHHhh---CCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHH
Confidence 459999999776321 11234444433 34666666666764432211 123455556666654
No 311
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.52 E-value=75 Score=26.82 Aligned_cols=18 Identities=50% Similarity=0.722 Sum_probs=15.8
Q ss_pred EEeecChhHHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~~ 177 (326)
.+.|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 489999999999999854
No 312
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.40 E-value=64 Score=28.17 Aligned_cols=17 Identities=47% Similarity=0.599 Sum_probs=15.3
Q ss_pred EEeecChhHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAV 176 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~ 176 (326)
.|.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 69999999999998873
No 313
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=20.34 E-value=1.3e+02 Score=26.15 Aligned_cols=18 Identities=44% Similarity=0.540 Sum_probs=16.4
Q ss_pred EEeecChhHHHHHHHHHH
Q 020406 160 FISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 160 ~l~G~S~GG~~a~~~a~~ 177 (326)
++.|.|+|+.+|+.++..
T Consensus 100 ~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 100 VISGSSAGAIVAALLGTH 117 (298)
T ss_pred EEEEEcHHHHHHHHHHcC
Confidence 599999999999999875
No 314
>PRK10824 glutaredoxin-4; Provisional
Probab=20.24 E-value=2.7e+02 Score=20.35 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=42.6
Q ss_pred CCCcEEEEEcCCccccCCCCCCcchhHHHHHhhcCCcEEEeecCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCcccc
Q 020406 72 TKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLASELQAVIISPDYRLAPENRLPAAIEDGYMAVKWLQAQAVANEPDTWLT 151 (326)
Q Consensus 72 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~ 151 (326)
...|+|||..|..-.... .|...+.++..+.|+..-.+|.-.. .++.. .+.+.. .
T Consensus 13 ~~~~Vvvf~Kg~~~~p~C----pyc~~ak~lL~~~~i~~~~idi~~d---------~~~~~---~l~~~s-g-------- 67 (115)
T PRK10824 13 AENPILLYMKGSPKLPSC----GFSAQAVQALSACGERFAYVDILQN---------PDIRA---ELPKYA-N-------- 67 (115)
T ss_pred hcCCEEEEECCCCCCCCC----chHHHHHHHHHHcCCCceEEEecCC---------HHHHH---HHHHHh-C--------
Confidence 356899999863211111 1555666777666633222232111 12233 333322 1
Q ss_pred cccCCCcEEEeecChhHHHHHHHHHH
Q 020406 152 EVADFGKVFISGDSAGGNIAHNLAVR 177 (326)
Q Consensus 152 ~~~d~~~i~l~G~S~GG~~a~~~a~~ 177 (326)
.-...+|+|-|..-||+=-+.-+.+
T Consensus 68 -~~TVPQIFI~G~~IGG~ddl~~l~~ 92 (115)
T PRK10824 68 -WPTFPQLWVDGELVGGCDIVIEMYQ 92 (115)
T ss_pred -CCCCCeEEECCEEEcChHHHHHHHH
Confidence 1223589999999999977666544
Done!