Your job contains 1 sequence.
>020411
MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY
ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV
AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG
RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ
FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD
NPAILYEEPSAKVKQAIERVKHIHSL
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020411
(326 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119201 - symbol:HDA14 "AT4G33470" species:370... 1378 7.0e-141 1
UNIPROTKB|Q604Q2 - symbol:MCA2486 "Histone deacetylase/Ac... 502 4.7e-48 1
TIGR_CMR|SPO_0250 - symbol:SPO_0250 "histone deacetylase ... 501 6.0e-48 1
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 507 1.9e-47 1
ASPGD|ASPL0000014944 - symbol:hdaA species:162425 "Emeric... 478 5.8e-45 1
UNIPROTKB|E2RSA8 - symbol:HDAC10 "Uncharacterized protein... 464 5.8e-44 1
UNIPROTKB|F1RXT2 - symbol:LOC100518786 "Uncharacterized p... 464 7.2e-44 1
UNIPROTKB|I3LDD6 - symbol:LOC100518786 "Uncharacterized p... 464 7.2e-44 1
TAIR|locus:2095087 - symbol:HDA15 "AT3G18520" species:370... 460 1.3e-43 1
MGI|MGI:2158340 - symbol:Hdac10 "histone deacetylase 10" ... 459 2.2e-43 1
UNIPROTKB|Q0VD49 - symbol:HDAC10 "Uncharacterized protein... 457 4.1e-43 1
UNIPROTKB|Q3Z9M2 - symbol:DET0330 "Histone deacetylase fa... 454 5.7e-43 1
TIGR_CMR|DET_0330 - symbol:DET_0330 "histone deacetylase ... 454 5.7e-43 1
UNIPROTKB|Q969S8 - symbol:HDAC10 "Histone deacetylase 10"... 455 7.0e-43 1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 462 8.0e-43 1
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 462 8.1e-43 1
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 462 8.1e-43 1
UNIPROTKB|Q4KBB7 - symbol:PFL_3361 "Histone deacetylase f... 445 5.2e-42 1
SGD|S000004966 - symbol:HDA1 "Putative catalytic subunit ... 447 9.5e-42 1
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 453 1.0e-41 1
ZFIN|ZDB-GENE-061013-95 - symbol:hdac4 "histone deacetyla... 452 1.1e-41 1
MGI|MGI:3036234 - symbol:Hdac4 "histone deacetylase 4" sp... 439 1.2e-41 2
TIGR_CMR|CHY_0263 - symbol:CHY_0263 "histone deacetylase ... 441 1.4e-41 1
RGD|619979 - symbol:Hdac4 "histone deacetylase 4" species... 439 1.9e-41 2
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 451 1.9e-41 1
UNIPROTKB|F1PRU6 - symbol:HDAC4 "Uncharacterized protein"... 435 3.3e-41 2
UNIPROTKB|P56524 - symbol:HDAC4 "Histone deacetylase 4" s... 438 4.1e-41 2
UNIPROTKB|F5GX36 - symbol:HDAC4 "Histone deacetylase 4" s... 438 6.3e-41 1
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 446 6.6e-41 1
TIGR_CMR|SPO_A0096 - symbol:SPO_A0096 "histone deacetylas... 433 9.6e-41 1
UNIPROTKB|F1NWX8 - symbol:HDAC4 "Histone deacetylase 4" s... 441 1.9e-40 1
UNIPROTKB|F1NES1 - symbol:HDAC4 "Histone deacetylase 4" s... 440 2.4e-40 1
UNIPROTKB|F1NP26 - symbol:HDAC4 "Histone deacetylase 4" s... 440 2.4e-40 1
UNIPROTKB|P83038 - symbol:HDAC4 "Histone deacetylase 4" s... 440 2.5e-40 1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 437 2.6e-40 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 437 2.6e-40 1
UNIPROTKB|E2RS82 - symbol:HDAC10 "Uncharacterized protein... 426 5.3e-40 1
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 432 2.3e-39 1
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 432 2.4e-39 1
UNIPROTKB|F1MYR0 - symbol:HDAC4 "Uncharacterized protein"... 430 3.0e-39 1
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"... 428 5.6e-39 1
UNIPROTKB|H9KZE7 - symbol:H9KZE7 "Uncharacterized protein... 426 5.9e-39 1
POMBASE|SPBC800.03 - symbol:clr3 "histone deacetylase (cl... 421 6.3e-39 1
FB|FBgn0041210 - symbol:HDAC4 "HDAC4" species:7227 "Droso... 410 6.4e-39 2
UNIPROTKB|H9KZJ3 - symbol:HDAC10 "Uncharacterized protein... 416 9.3e-39 1
UNIPROTKB|Q5LQF5 - symbol:SPO2535 "Histone deacetylase/Ac... 414 9.9e-39 1
TIGR_CMR|SPO_2535 - symbol:SPO_2535 "histone deacetylase/... 414 9.9e-39 1
TAIR|locus:2201826 - symbol:HDA08 "AT1G08460" species:370... 413 1.3e-38 1
UNIPROTKB|G4NCI1 - symbol:MGG_01076 "Histone deacetylase ... 420 1.3e-38 1
UNIPROTKB|F1LQG9 - symbol:Hdac5 "Protein Hdac5" species:1... 421 1.4e-38 1
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"... 424 1.4e-38 1
UNIPROTKB|F1LM64 - symbol:Hdac5 "Protein Hdac5" species:1... 421 1.8e-38 1
UNIPROTKB|F1LSL9 - symbol:Hdac5 "Protein Hdac5" species:1... 421 1.8e-38 1
MGI|MGI:1333784 - symbol:Hdac5 "histone deacetylase 5" sp... 422 2.3e-38 1
UNIPROTKB|Q80ZH1 - symbol:HDAC5 "Histone deacetylase 5" s... 421 2.9e-38 1
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 419 4.9e-38 1
MGI|MGI:1891835 - symbol:Hdac7 "histone deacetylase 7" sp... 417 5.3e-38 1
UNIPROTKB|E1C7C0 - symbol:HDAC9 "Uncharacterized protein"... 418 5.6e-38 1
TIGR_CMR|SPO_3195 - symbol:SPO_3195 "histone deacetylase ... 406 7.0e-38 1
UNIPROTKB|F1PK81 - symbol:HDAC7 "Uncharacterized protein"... 416 7.1e-38 1
UNIPROTKB|Q8WUI4 - symbol:HDAC7 "Histone deacetylase 7" s... 416 7.1e-38 1
UNIPROTKB|F1N616 - symbol:HDAC7 "Uncharacterized protein"... 415 9.9e-38 1
RGD|1305874 - symbol:Hdac10 "histone deacetylase 10" spec... 405 1.0e-37 1
UNIPROTKB|F1LSN5 - symbol:F1LSN5 "Uncharacterized protein... 414 1.1e-37 1
UNIPROTKB|I3LM52 - symbol:HDAC4 "Uncharacterized protein"... 415 1.1e-37 1
ZFIN|ZDB-GENE-030131-5464 - symbol:hdac10 "histone deacet... 410 1.4e-37 1
UNIPROTKB|F1S1J4 - symbol:HDAC5 "Uncharacterized protein"... 407 1.8e-37 1
UNIPROTKB|J3KPH8 - symbol:HDAC7 "Histone deacetylase 7" s... 412 2.2e-37 1
UNIPROTKB|Q9UQL6 - symbol:HDAC5 "Histone deacetylase 5" s... 412 2.7e-37 1
UNIPROTKB|Q5R902 - symbol:HDAC5 "Histone deacetylase 5" s... 410 4.5e-37 1
UNIPROTKB|F1MNA5 - symbol:HDAC5 "Uncharacterized protein"... 409 5.8e-37 1
UNIPROTKB|Q9UKV0 - symbol:HDAC9 "Histone deacetylase 9" s... 408 5.9e-37 1
RGD|1310748 - symbol:Hdac9 "histone deacetylase 9" specie... 397 6.3e-37 1
UNIPROTKB|J9P9N5 - symbol:HDAC5 "Uncharacterized protein"... 408 6.9e-37 1
UNIPROTKB|F1P6I3 - symbol:HDAC5 "Uncharacterized protein"... 408 7.3e-37 1
UNIPROTKB|F6X8E7 - symbol:HDAC9 "Uncharacterized protein"... 402 2.9e-36 1
TAIR|locus:2159461 - symbol:HDA18 "AT5G61070" species:370... 392 9.6e-36 1
WB|WBGene00001837 - symbol:hda-4 species:6239 "Caenorhabd... 393 1.7e-35 1
UNIPROTKB|Q81KS2 - symbol:acuC "Acetoin utilization prote... 371 3.6e-34 1
TIGR_CMR|BA_4918 - symbol:BA_4918 "acetoin utilization pr... 371 3.6e-34 1
UNIPROTKB|I3L961 - symbol:I3L961 "Uncharacterized protein... 370 1.4e-33 1
UNIPROTKB|I3LKB5 - symbol:I3LKB5 "Uncharacterized protein... 370 1.6e-33 1
WB|WBGene00001838 - symbol:hda-10 species:6239 "Caenorhab... 364 2.0e-33 1
DICTYBASE|DDB_G0280195 - symbol:hdaC "type-2 histone deac... 374 6.2e-33 1
UNIPROTKB|Q484X2 - symbol:CPS_1655 "Histone deacetylase f... 350 6.0e-32 1
TIGR_CMR|CPS_1655 - symbol:CPS_1655 "histone deacetylase ... 350 6.0e-32 1
UNIPROTKB|C9J8B8 - symbol:HDAC10 "Histone deacetylase 10"... 316 9.4e-32 2
UNIPROTKB|Q4K3I0 - symbol:aphA_3 "Acetylpolyamine aminohy... 311 3.8e-31 2
UNIPROTKB|Q4KAJ1 - symbol:aphA_1 "Acetylpolyamine aminohy... 311 3.3e-30 2
UNIPROTKB|Q4K950 - symbol:aphA_2 "Acetylpolyamine aminohy... 320 9.1e-29 1
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote... 316 2.4e-28 1
TIGR_CMR|CHY_0174 - symbol:CHY_0174 "acetoin utilization ... 316 2.4e-28 1
DICTYBASE|DDB_G0279267 - symbol:hdaD "type-2 histone deac... 222 3.0e-28 2
UNIPROTKB|F1SEI2 - symbol:HDAC9 "Uncharacterized protein"... 285 4.6e-25 1
UNIPROTKB|E7EUZ1 - symbol:HDAC6 "Histone deacetylase 6" s... 282 9.7e-25 1
UNIPROTKB|H0YH91 - symbol:HDAC7 "Histone deacetylase 7" s... 280 1.6e-24 1
UNIPROTKB|F1MWS5 - symbol:HDAC9 "Uncharacterized protein"... 291 1.6e-24 1
TIGR_CMR|SPO_2002 - symbol:SPO_2002 "acetylpolyamine amin... 266 4.8e-23 1
UNIPROTKB|E1BQQ2 - symbol:Gga.27678 "Uncharacterized prot... 256 5.5e-22 1
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 251 2.5e-21 1
WARNING: Descriptions of 115 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 1378 (490.1 bits), Expect = 7.0e-141, P = 7.0e-141
Identities = 259/326 (79%), Positives = 290/326 (88%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
ELT +FRGS+I+EL NF A+V+DIA+VH +AYV GLEKAMD AS G+I IEGSGPTYA
Sbjct: 98 ELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKAMDEASDSGLIFIEGSGPTYA 157
Query: 62 TATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
T+TTFQ+SL AAGAG+ALVDSV AAS+N DPP+GFALIRPPGHHA+PKGPMGFCVFGNV
Sbjct: 158 TSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIRPPGHHAVPKGPMGFCVFGNV 217
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAAR+AQR HGLKR+FIIDFDVHHGNGTNDAF +DPDIFFLSTHQDGSYPGTGKI ++G
Sbjct: 218 AIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLSTHQDGSYPGTGKISDIG 277
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
+G GEG+TLNLPLPGGSGD AMRTVF E+IVPCAQRFKPD+ILVSAGYDAHVLDPLA+LQ
Sbjct: 278 KGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDIILVSAGYDAHVLDPLANLQ 337
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
FTT TYY LA +IK+LAK++CG RCVFFLEGGYNL SLS SVADSFRA LGE S ASEFD
Sbjct: 338 FTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNLESLSSSVADSFRALLGEDSLASEFD 397
Query: 301 NPAILYEEPSAKVKQAIERVKHIHSL 326
NPA LY+EP KV+ AI+R K IH L
Sbjct: 398 NPAYLYDEPMRKVRDAIQRAKSIHCL 423
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 113/285 (39%), Positives = 153/285 (53%)
Query: 6 EFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATT 65
EFR +E A + + VH+R ++ E+ Q G ++ T + +
Sbjct: 38 EFRSLRRLEAPR---ADISRLELVHSRRHI---ERVFASLPQTGHHFVDAD--TVVSPES 89
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
+ +L A GA VD V + R F +RPPGHHA P MGFC+F N+AIAA
Sbjct: 90 GEAALHAVGAVCLAVDEVIGKRARN----AFCAVRPPGHHAEPDAAMGFCLFNNIAIAAA 145
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
+A HGL+R+ I+DFDVHHGNGT AF +P + ++STHQ YPGTG +E G
Sbjct: 146 HALANHGLQRIAIVDFDVHHGNGTQAAFRRNPQVLYVSTHQYPWYPGTGSAEETG----V 201
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+ +N+PLP G+ A R +P RF+P+L+L+SAG+DAH DPLA L T
Sbjct: 202 GNLVNIPLPAGTDSAAYREAVTATALPAIDRFRPELVLISAGFDAHRDDPLADLALTEDD 261
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
Y + A + +LA G R V LEGGY L +L S A R L
Sbjct: 262 YGWITAELMKLADRHSGGRIVSALEGGYALEALGRSAAAHLRTLL 306
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 113/289 (39%), Positives = 168/289 (58%)
Query: 11 EIIELKNFS-P-ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
E ++L+ + P A+ DD+ +H YV+ + D +G I+G T+ + +
Sbjct: 35 EPLDLRRVTAPLAAEDDLLRIHPAGYVADIR---DARPDEGFAQIDGD--TFLSPGSVDA 89
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAGA + VD V + + F IRPPGHHA + MGFC+FGN A+AA++A
Sbjct: 90 AFRAAGAVVRAVDMVLGGEAQN----AFCAIRPPGHHAERETAMGFCLFGNAALAAKHAL 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
HGL+RV ++DFDVHHGNGT D +D+ +++ Q +PG+G+ DE G G
Sbjct: 146 DHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLITSQQMPLWPGSGRPDEDG---AHGQI 202
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+PL G+G MR + P + FKP+LI++SAG+DAH DPLA+L ++T +
Sbjct: 203 VNIPLAPGTGGAEMRAAYMAQAFPRLRAFKPELIIISAGFDAHQDDPLANLNWSTADFAW 262
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKAS 297
L A + LA++LC R V LEGGY+LN+L A + RA + E KA+
Sbjct: 263 LTAELCALAQELCQGRIVSTLEGGYDLNAL----AAATRAHVQELIKAA 307
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 507 (183.5 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 120/319 (37%), Positives = 175/319 (54%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 585 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 641
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 642 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 697
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-P-GT-GKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS+ P G G D VG+G
Sbjct: 698 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 757
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 758 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 817
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 818 AEGYGMLTHWLSALAS----GRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 873
Query: 303 AILYEEPSAKVKQAIERVK 321
A L + P+ + +E ++
Sbjct: 874 A-LQKPPTVAFQSCVESLQ 891
Score = 424 (154.3 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 106/288 (36%), Positives = 159/288 (55%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
+EL + S A+ D+I +H + L++ R ++ L Y +TF+ SL
Sbjct: 159 LELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLL 217
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F NVA+A ++A H
Sbjct: 218 ASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVH 273
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PGTGKID--EVGRGDGEG 186
L+R+ IID+DVHHG GT FY+DP + + S H + GS+ P + D +G G G G
Sbjct: 274 KLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTG 333
Query: 187 STLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
N+PL G + +F ++++P A F+P+LI+VSAGYDA + P ++ T
Sbjct: 334 YNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPAC 393
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
Y L + +LA +R LEGGY L+SL+ A + R+ LG+P
Sbjct: 394 YPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGDP 437
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 478 (173.3 bits), Expect = 5.8e-45, P = 5.8e-45
Identities = 110/291 (37%), Positives = 157/291 (53%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ VH A+ + +E D + ++ I L Y TF SL + G I
Sbjct: 188 ATEEEISLVHTAAHYAFVESTKDMSDEELIALEHTRDSIYFNNLTFASSLLSVGGAIETC 247
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL--KRVFI 138
+VA K + A+IRPPGHHA MGFC+F NV++AAR Q+ GL +++ I
Sbjct: 248 LAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQQRLGLSCRKIMI 303
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP++ ++S H Q+GS YPG G D G G GEG +N+P
Sbjct: 304 LDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPW 363
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD FH+V++P AQ F PDL+++++G+DA D L F T Y A+
Sbjct: 364 PSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGC-FVTPACY---AH 419
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPA 303
+ + L + LEGGYN S+S S + +G P F P+
Sbjct: 420 MTHMLMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPDRLSFTCPS 470
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 464 (168.4 bits), Expect = 5.8e-44, P = 5.8e-44
Identities = 113/280 (40%), Positives = 151/280 (53%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
AS ++ VH+ YVS L + Q + + G Y +TF + A GA + L
Sbjct: 55 ASEAELGLVHSPEYVS-LLRGTQALDTQELRALSGQYDAVYFHPSTFHCARLAVGAALQL 113
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD+V G AL+RPPGHH+ GFCVF NVAIAAR+AQ+ HGL+R+ I+
Sbjct: 114 VDAVLMGAVHN----GLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIV 169
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS---YPGTGKIDEVGRGDGEGSTLNLPLP 194
D+DVHHG G F DDP + + S H + G Y D VG+G G G T+NLP
Sbjct: 170 DWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWN 229
Query: 195 G-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + ++
Sbjct: 230 QVGMGNADYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----GHL 285
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
QL + L G R LEGGY+L SLS SV RA LG+P
Sbjct: 286 TQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDP 325
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 464 (168.4 bits), Expect = 7.2e-44, P = 7.2e-44
Identities = 117/307 (38%), Positives = 164/307 (53%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YV+ L ++++ L Y +TF + AAGA + LV
Sbjct: 55 ASEAELGLVHSPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLV 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V A R G AL+RPPGHH+ GFCVF +VAIAA++AQ+ HGL R+ I+D
Sbjct: 115 DAVMAGVVRN----GLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGS---YPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D+HHG GT F DDP + + S H + G Y D VGRG G G T+NLP
Sbjct: 171 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 230
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F +V++P A F +L+LVSAG+D+ + D +Q T + A++
Sbjct: 231 VGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECF----AHLT 286
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
QL + L G R LEGGY+L SLS SV +A LG+P A P + P
Sbjct: 287 QLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDP--APPLSGPMV----PHGSAL 340
Query: 315 QAIERVK 321
Q+I+ V+
Sbjct: 341 QSIQSVR 347
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 464 (168.4 bits), Expect = 7.2e-44, P = 7.2e-44
Identities = 117/307 (38%), Positives = 164/307 (53%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YV+ L ++++ L Y +TF + AAGA + LV
Sbjct: 57 ASEAELGLVHSPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLV 116
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V A R G AL+RPPGHH+ GFCVF +VAIAA++AQ+ HGL R+ I+D
Sbjct: 117 DAVMAGVVRN----GLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVD 172
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGS---YPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D+HHG GT F DDP + + S H + G Y D VGRG G G T+NLP
Sbjct: 173 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 232
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F +V++P A F +L+LVSAG+D+ + D +Q T + A++
Sbjct: 233 VGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECF----AHLT 288
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
QL + L G R LEGGY+L SLS SV +A LG+P A P + P
Sbjct: 289 QLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDP--APPLSGPMV----PHGSAL 342
Query: 315 QAIERVK 321
Q+I+ V+
Sbjct: 343 QSIQSVR 349
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 106/272 (38%), Positives = 148/272 (54%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
++ VH +V A+D SQ ++ + TYA + + + AAG L +
Sbjct: 207 ELQMVHTSEHVD----AVDTTSQ--LLYSYFTSDTYANEYSARAARLAAGLCADLATDIF 260
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ + GFAL+RPPGHHA + MGFC+ N A+AA AQ A G K+V I+D+DVH
Sbjct: 261 TGRVKN----GFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAA-GAKKVLIVDWDVH 315
Query: 145 HGNGTNDAFYDDPDIFFLSTHQ-DGS--YPGTGKIDEVGRGDGEGSTLNLPLP-GGSGDT 200
HGNGT + F + + ++S H+ +G YPGTG DEVG GEG +N+P GG GD
Sbjct: 316 HGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDK 375
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
F V++P A F PD +++SAG+DA DPL T Y + + Q+ DL
Sbjct: 376 DYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGY----SRMTQMLGDL 431
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
CG + + LEGGYNL S+S S + LGE
Sbjct: 432 CGGKMLVILEGGYNLRSISASATAVIKVLLGE 463
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 459 (166.6 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 106/280 (37%), Positives = 157/280 (56%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ Y++ ++K ++ L + Y TF + AAGA + LV
Sbjct: 55 ASEEELGLVHSPEYIALVQKTQTLDKEELHALSKQYNAVYFHPDTFHCARLAAGAALQLV 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V G AL+RPPGHH+ GFCVF NVA+AA++A++ +GL+R+ I+D
Sbjct: 115 DAVLTGAVHN----GLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILIVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-P--GTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG G F DDP + + S H + GS+ P D VG+G G+G T+NLP
Sbjct: 171 WDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQ 230
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + A++
Sbjct: 231 VGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AHLT 286
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
QL + L G R LEGGY+L SL+ SV + LG+P+
Sbjct: 287 QLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPT 326
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 457 (165.9 bits), Expect = 4.1e-43, P = 4.1e-43
Identities = 111/280 (39%), Positives = 154/280 (55%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YV+ L+ +++ L + Y +TF + A GA + LV
Sbjct: 55 ASEAELGLVHSPEYVALLQGTQALGTRELQALSKEYDAVYLHPSTFHCARLAVGAALQLV 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V R G AL+RPPGHH+ GFCVF NVAIAA++AQ+ HGL+R+ I+D
Sbjct: 115 DAVLTGAVRN----GLALVRPPGHHSQRATANGFCVFNNVAIAAKHAQQKHGLRRILIVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-P--GTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG G F DDP + + S H + G + P D VGRG G G T+NLP
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQ 230
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F V++P A F P+L+LVSAG+D+ + DP + T + A++
Sbjct: 231 VGMGNADYVAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECF----AHLT 286
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
L + L G R LEGGY+L SLS SV RA LG+P+
Sbjct: 287 HLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVRALLGDPA 326
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 99/268 (36%), Positives = 148/268 (55%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
++ H R Y+S +E+ S G + T + +++ +L A G + VD V
Sbjct: 54 ELEGFHTRKYISRVEEV--GFSGGGWL----DQDTVISVDSYETALYAVGGVLEGVDKVL 107
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ + F + RPPGHHA+P+ MGFC+F NVA+ A +A H LKRV ++DFDVH
Sbjct: 108 SGELES----AFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVDFDVH 163
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRT 204
HGNG +DP + ++STHQ +P TG D G + + LN+PLP G GD+ +
Sbjct: 164 HGNGIQHVCLNDPRVTYISTHQIHHFPFTG--DSCEDGPFQ-NILNIPLPAGCGDSHYQK 220
Query: 205 VFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSR 264
VF ++I P ++ P+LILV AGYDAH D + + + + + +K+ A ++CG +
Sbjct: 221 VFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKKTADEVCGGK 280
Query: 265 CVFFLEGGYNLNSLSYSVADSFRAFLGE 292
VF LEGGY+ L+ SV S L E
Sbjct: 281 MVFSLEGGYHYLGLAESVGASLAVLLDE 308
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 99/268 (36%), Positives = 148/268 (55%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
++ H R Y+S +E+ S G + T + +++ +L A G + VD V
Sbjct: 54 ELEGFHTRKYISRVEEV--GFSGGGWL----DQDTVISVDSYETALYAVGGVLEGVDKVL 107
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ + F + RPPGHHA+P+ MGFC+F NVA+ A +A H LKRV ++DFDVH
Sbjct: 108 SGELES----AFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVDFDVH 163
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRT 204
HGNG +DP + ++STHQ +P TG D G + + LN+PLP G GD+ +
Sbjct: 164 HGNGIQHVCLNDPRVTYISTHQIHHFPFTG--DSCEDGPFQ-NILNIPLPAGCGDSHYQK 220
Query: 205 VFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSR 264
VF ++I P ++ P+LILV AGYDAH D + + + + + +K+ A ++CG +
Sbjct: 221 VFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKKTADEVCGGK 280
Query: 265 CVFFLEGGYNLNSLSYSVADSFRAFLGE 292
VF LEGGY+ L+ SV S L E
Sbjct: 281 MVFSLEGGYHYLGLAESVGASLAVLLDE 308
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 455 (165.2 bits), Expect = 7.0e-43, P = 7.0e-43
Identities = 109/281 (38%), Positives = 156/281 (55%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
AS +++ VH+ YVS L + ++ + + G Y +TF + AAGAG+ L
Sbjct: 55 ASEEELGLVHSPEYVS-LVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQL 113
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD+V + G AL+RPPGHH GFCVF NVAIAA +A++ HGL R+ ++
Sbjct: 114 VDAVLTGAVQN----GLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVV 169
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-P--GTGKIDEVGRGDGEGSTLNLPLP 194
D+DVHHG G F DDP + + S H + G + P D VGRG G G T+NLP
Sbjct: 170 DWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWN 229
Query: 195 G-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A++
Sbjct: 230 QVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AHL 285
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 286 TQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 462 (167.7 bits), Expect = 8.0e-43, P = 8.0e-43
Identities = 105/268 (39%), Positives = 149/268 (55%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
A+ ++I VH + + L ++ + E Y T T + + A GA +
Sbjct: 478 ATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQS 537
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD + L ++RPPGHHA GFC+F NVA+AA+YAQR H KRV I+
Sbjct: 538 VDEIFEKDAGQRNAL--VIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLIL 595
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQD--GS-YP-GTGK-IDEVGRGDGEGSTLNLPLP 194
D+DVHHGNGT + FY+D ++ ++S H+ G+ YP G K +VG G GEG ++N+P
Sbjct: 596 DWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFS 655
Query: 195 GGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G GD + F VI+P A +F PDL+L+SAG+DA V DPL + T T+ ++ +
Sbjct: 656 GVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQL 715
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
LA G R + LEGGYNL S+S S
Sbjct: 716 SSLA----GGRIITVLEGGYNLTSISNS 739
Score = 366 (133.9 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 94/283 (33%), Positives = 142/283 (50%)
Query: 15 LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAG 74
L NF D+ H ++ V L ++ ++ +Q+ I Y + + S+ A
Sbjct: 60 LTNFLEIDDADLEVTHDKSMVKDLMES-EKKTQEDI---NSQCEKYDSVFMTENSMKVAK 115
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
G+A V + + GFA++RPPGHHA P GFC+F NVA AA A + G +
Sbjct: 116 DGVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAE 174
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PGTGK--IDEVGRGDGEGSTL 189
R+ I+D DVHHG+GT FYDD + + S H + G + P + D +G G G G
Sbjct: 175 RILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNA 234
Query: 190 NLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
NL L G D+ ++ V++P A +F P +++SAG+DA + DPL + T Y
Sbjct: 235 NLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSH 294
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ ++K LA+ R + LEGGYN + +V R LG
Sbjct: 295 ILYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLLG 333
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 462 (167.7 bits), Expect = 8.1e-43, P = 8.1e-43
Identities = 105/268 (39%), Positives = 149/268 (55%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
A+ ++I VH + + L ++ + E Y T T + + A GA +
Sbjct: 480 ATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQS 539
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD + L ++RPPGHHA GFC+F NVA+AA+YAQR H KRV I+
Sbjct: 540 VDEIFEKDAGQRNAL--VIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLIL 597
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQD--GS-YP-GTGK-IDEVGRGDGEGSTLNLPLP 194
D+DVHHGNGT + FY+D ++ ++S H+ G+ YP G K +VG G GEG ++N+P
Sbjct: 598 DWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFS 657
Query: 195 GGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G GD + F VI+P A +F PDL+L+SAG+DA V DPL + T T+ ++ +
Sbjct: 658 GVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQL 717
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
LA G R + LEGGYNL S+S S
Sbjct: 718 SSLA----GGRIITVLEGGYNLTSISNS 741
Score = 373 (136.4 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 97/285 (34%), Positives = 144/285 (50%)
Query: 15 LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA--TTFQESLAA 72
L NF D+ H ++ V L ++ ++ +Q+ I Y + T FQ S+
Sbjct: 60 LTNFLEIDDADLEVTHDKSMVKDLMES-EKKTQEDI---NSQCEKYDSVFMTEFQNSMKV 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
A G+A V + + GFA++RPPGHHA P GFC+F NVA AA A + G
Sbjct: 116 AKDGVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-G 174
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PGTGK--IDEVGRGDGEGS 187
+R+ I+D DVHHG+GT FYDD + + S H + G + P + D +G G G G
Sbjct: 175 AERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGY 234
Query: 188 TLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
NL L G D+ ++ V++P A +F P +++SAG+DA + DPL + T Y
Sbjct: 235 NANLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGY 294
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ ++K LA+ R + LEGGYN + +V R LG
Sbjct: 295 SHILYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLLG 335
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 462 (167.7 bits), Expect = 8.1e-43, P = 8.1e-43
Identities = 105/268 (39%), Positives = 149/268 (55%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
A+ ++I VH + + L ++ + E Y T T + + A GA +
Sbjct: 480 ATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQS 539
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD + L ++RPPGHHA GFC+F NVA+AA+YAQR H KRV I+
Sbjct: 540 VDEIFEKDAGQRNAL--VIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLIL 597
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQD--GS-YP-GTGK-IDEVGRGDGEGSTLNLPLP 194
D+DVHHGNGT + FY+D ++ ++S H+ G+ YP G K +VG G GEG ++N+P
Sbjct: 598 DWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFS 657
Query: 195 GGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G GD + F VI+P A +F PDL+L+SAG+DA V DPL + T T+ ++ +
Sbjct: 658 GVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQL 717
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
LA G R + LEGGYNL S+S S
Sbjct: 718 SSLA----GGRIITVLEGGYNLTSISNS 741
Score = 373 (136.4 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 97/285 (34%), Positives = 144/285 (50%)
Query: 15 LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA--TTFQESLAA 72
L NF D+ H ++ V L ++ ++ +Q+ I Y + T FQ S+
Sbjct: 60 LTNFLEIDDADLEVTHDKSMVKDLMES-EKKTQEDI---NSQCEKYDSVFMTEFQNSMKV 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
A G+A V + + GFA++RPPGHHA P GFC+F NVA AA A + G
Sbjct: 116 AKDGVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-G 174
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PGTGK--IDEVGRGDGEGS 187
+R+ I+D DVHHG+GT FYDD + + S H + G + P + D +G G G G
Sbjct: 175 AERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGY 234
Query: 188 TLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
NL L G D+ ++ V++P A +F P +++SAG+DA + DPL + T Y
Sbjct: 235 NANLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGY 294
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ ++K LA+ R + LEGGYN + +V R LG
Sbjct: 295 SHILYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLLG 335
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 100/264 (37%), Positives = 150/264 (56%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ + A+ DD+ VH+ AY+ KA+ A G + E GP +++ +
Sbjct: 66 LHLRSAAAATEDDLLRVHSAAYLQRF-KALSDAGG-GHLGDEAPVGPG-----SYEIAQL 118
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG +A VD+V + + D ++L RPPGHH MGFC N+AIA A+ H
Sbjct: 119 SAGLAMAAVDAVLSGE--ADN--AYSLSRPPGHHCTRDQAMGFCFLANIAIAIEAAKARH 174
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V +ID+DVHHGNGT F + D+ LS HQDG +P G G + GRG G G +N
Sbjct: 175 GLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQDGCFPPGYGGEQDRGRGAGLGCNIN 234
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSG A +++P +RF+P+LI+V+ GYDA+ +DPLA + + ++ +
Sbjct: 235 IPLLPGSGHDAYLYAMQHIVIPALERFEPELIIVACGYDANAVDPLARMLLHSDSFREMT 294
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K A+ LC R V EGGY+
Sbjct: 295 QCLKDAAERLCRGRLVLVHEGGYS 318
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 447 (162.4 bits), Expect = 9.5e-42, P = 9.5e-42
Identities = 100/313 (31%), Positives = 166/313 (53%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + ++ + E Y ++ + G I
Sbjct: 126 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 186 KAVVEGRVKNS----LAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H + G Y PGT G+ D+ G G GEG N+
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + T Y +
Sbjct: 302 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 361
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 362 LKSLAR---GNLCVV-LEGGYNLDAIARSALSVAKVLIGEPP--DELPDPL---SDPKPE 412
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 413 VIEMIDKVIRLQS 425
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 453 (164.5 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 105/278 (37%), Positives = 155/278 (55%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
D++ VH + YV ++ + ++ L E Y F + + G+ + LVD V
Sbjct: 116 DELLLVHTKEYVELMKSTQNMTEEELKTLAEKYDSVYLHPGFFSSACLSVGSVLQLVDKV 175
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
S+ R GF++ RPPGHHA GFC+F N+AIAARYAQ+ H ++RV I+D+DV
Sbjct: 176 MTSQLRN----GFSINRPPGHHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDV 231
Query: 144 HHGNGTNDAFYDDPDIFFLSTH--QDGSY-PGTGKIDE--VGRGDGEGSTLNLP---LPG 195
HHG G F +DP + + S H +DGS+ P + D VG G G+G +NLP +
Sbjct: 232 HHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVGM 291
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
SGD T F ++++P A F+P L+LV+AG+DA + DP +Q + + +L +K
Sbjct: 292 ESGDYI--TAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKG 349
Query: 256 LAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+A+ R V LEGGYNL S + V S R+ LG+P
Sbjct: 350 VAQ----GRLVLALEGGYNLQSTAEGVCASMRSLLGDP 383
Score = 397 (144.8 bits), Expect = 1.0e-35, P = 1.0e-35
Identities = 95/279 (34%), Positives = 145/279 (51%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++A H+ ++S ++ + + L + + + ++ +L AAG+
Sbjct: 494 ATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSA 553
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR-AHGLKRVFII 139
++ + R A++RPPGHHA GFC F A+ ARYAQ RV I+
Sbjct: 554 QAILTGQVRN----AVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIV 609
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PGT--GKIDEVGRGDGEGSTLNLPLP 194
D+DVHHGNGT F +D + ++S H +DG++ P + D+VG G G G +N+P
Sbjct: 610 DWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWN 669
Query: 195 GGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
GG GD FH +++P A+ F P+L+LVSAG+DA DPL Q T Y L +
Sbjct: 670 GGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQL 729
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
LA R + LEGGYNL S+S S++ LG+
Sbjct: 730 MSLA----AGRVLIILEGGYNLTSISESMSMCTSMLLGD 764
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 452 (164.2 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 118/326 (36%), Positives = 176/326 (53%)
Query: 21 ASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATTFQE----SLA 71
A+++++ +VH+ A+V + L + +D + + + G + T + E S A
Sbjct: 651 ATLEELQTVHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAA 710
Query: 72 --AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G+ + LV VA+ + R GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 711 RLAVGSVVDLVFKVASGELRN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ 766
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFY DP++ +LS H+ DG++ PG+G DEVG G G G
Sbjct: 767 RLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGSGAPDEVGIGPGVG 826
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 827 FNVNMAFTGGLEPPMGDADYLAAFTSVVMPIANEFSPDVVLVSSGFDAVEGHP-PPLGGY 885
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
+ T + L KQL L G R V LEGG++L ++ + A LG
Sbjct: 886 KLTAKCFGYLT---KQLM-GLAGGRLVLALEGGHDLTAICDASEACVSALLGNELDPIPE 941
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHS 325
D IL + P+A Q++E+V + S
Sbjct: 942 D---ILQQRPNANAIQSMEKVLEVQS 964
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 439 (159.6 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 101/264 (38%), Positives = 147/264 (55%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 766 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 821
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG++ PG+G DEVG G G G
Sbjct: 822 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 881
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 882 VNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPT-PLGGYNL 940
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L KQL L G R V LEGG++L ++ + A LG +
Sbjct: 941 SAKCFGYLT---KQLM-GLAGGRLVLALEGGHDLTAICDASEACVSALLGNELEPLP--- 993
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
+L++ P+A ++E+V IHS
Sbjct: 994 EKVLHQRPNANAVHSMEKVMDIHS 1017
Score = 41 (19.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 23/93 (24%), Positives = 36/93 (38%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARA----YVSGLEKAMDRASQQGIILIEGSG 57
EL + R ++ +LKN +AS + +V +KA+ + I S
Sbjct: 141 ELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLNKKKALAHRNLNHCI---SSD 197
Query: 58 PTYATATTFQESLAAAGAGIALVDSVAASKNRP 90
P Y T SL + + V+AS N P
Sbjct: 198 PRYWYGKTQHSSLDQSSPPQS---GVSASYNHP 227
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 101/228 (44%), Positives = 130/228 (57%)
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPK--GPMGFCVFGNVAIAARYA 127
L AAG+ I L + + A + + GFAL+RPPGHHA G GFC NVAI Y
Sbjct: 77 LIAAGSCIELAERILAGEVKN----GFALVRPPGHHATRTVYGNRGFCNINNVAITVDYL 132
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGE 185
+ G+K++ IID DVHHG+GT D FY DPD+ F+S HQDG YPGTG IDE G +
Sbjct: 133 RWVKGVKKIAIIDTDVHHGDGTQDIFYHDPDVLFISLHQDGRTLYPGTGFIDEAGTPNAY 192
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+T+NLPLP GSGD + + E ++P + F+P+ I+ SAG D H DPLA + T
Sbjct: 193 GTTINLPLPPGSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLARMAVTARG 252
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLN-SLSYSVADSFRAFLGE 292
Y + IK DL LEGGY++ +L Y A GE
Sbjct: 253 YGRITELIKP---DLA------VLEGGYSIEGALPYVNLAILLALYGE 291
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 439 (159.6 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 102/264 (38%), Positives = 147/264 (55%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 767 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 822
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG++ PG+G DEVG G G G
Sbjct: 823 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 882
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 883 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPT-PLGGYNL 941
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L KQL L G R V LEGG++L ++ + A LG +
Sbjct: 942 SAKCFGYLT---KQLM-GLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLP--- 994
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
+L++ P+A ++E+V IHS
Sbjct: 995 EKVLHQRPNANAVHSMEKVMGIHS 1018
Score = 39 (18.8 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 22/93 (23%), Positives = 37/93 (39%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARA----YVSGLEKAMDRASQQGIILIEGSG 57
EL + R ++ +LKN +AS + +V +KA+ + + + S
Sbjct: 141 ELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLNKKKAL---AHRNLNHCMSSD 197
Query: 58 PTYATATTFQESLAAAGAGIALVDSVAASKNRP 90
P Y T SL + + V+AS N P
Sbjct: 198 PRYWYGKTQHSSLDQSSPPQS---GVSASYNHP 227
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 451 (163.8 bits), Expect = 1.9e-41, P = 1.9e-41
Identities = 109/283 (38%), Positives = 158/283 (55%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L +A ++ + + EG+ Y +TF + A GA
Sbjct: 532 PALDSELLTCHSAEYVERL-RATEKMKTRDLHR-EGANFESIYICPSTFACAQLATGAAC 589
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 590 RLVEAVLSGEVLN----GIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGRALRI 645
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ-D-GSY-P-GT-GKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F +DP + ++S H+ D G++ P G G +VGR G G T+N+
Sbjct: 646 LIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNV 705
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 706 PWNGPRMGDADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 761
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 762 AHLTHLLMGLAGGRIILILEGGYNLTSISESMAACTHSLLGDP 804
Score = 385 (140.6 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 92/279 (32%), Positives = 144/279 (51%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L Y ++ + A G+ + LV
Sbjct: 135 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAGTYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++R+ I+D
Sbjct: 195 DAVMGAEIRN----GMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H + G + P G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 310
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T A ++
Sbjct: 311 VGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKVRQGEMSATPAGFA-HLT 369
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
L G + + LEGGYNL++L+ V+ S LG+P
Sbjct: 370 HFLMGLAGGKLILSLEGGYNLHALAKGVSGSLHTLLGDP 408
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 435 (158.2 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 105/266 (39%), Positives = 149/266 (56%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 773 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 828
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ + I+D+DVHHGNGT AFY+DP++ ++S H+ DG++ PG+G DEVG G G G
Sbjct: 829 DVSKTLIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFN 888
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 889 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPT-PLGGYNL 947
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L KQL L G R V LEGG++L ++ + A LG +E D
Sbjct: 948 SAKCFGYLT---KQLM-GLAGGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 998
Query: 302 -PA-ILYEEPSAKVKQAIERVKHIHS 325
P +L + P+A +++E+V IHS
Sbjct: 999 LPEKVLQQRPNANAVRSMEKVIEIHS 1024
Score = 41 (19.5 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 23/93 (24%), Positives = 36/93 (38%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARA----YVSGLEKAMDRASQQGIILIEGSG 57
EL + R ++ +LKN +AS + +V +KA+ + I S
Sbjct: 142 ELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLNKKKALAHRNLNHCI---SSD 198
Query: 58 PTYATATTFQESLAAAGAGIALVDSVAASKNRP 90
P Y T SL + + V+AS N P
Sbjct: 199 PRYWYGKTQHSSLDQSSPPQS---GVSASYNHP 228
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 438 (159.2 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 104/266 (39%), Positives = 148/266 (55%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 774 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 829
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG++ PG+G DEVG G G G
Sbjct: 830 SVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 889
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 890 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPT-PLGGYNL 948
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L KQL L G R V LEGG++L ++ + A LG +E D
Sbjct: 949 SARCFGYLT---KQLM-GLAGGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 999
Query: 302 -PA-ILYEEPSAKVKQAIERVKHIHS 325
P +L + P+A +++E+V IHS
Sbjct: 1000 LPEKVLQQRPNANAVRSMEKVMEIHS 1025
Score = 37 (18.1 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 18/73 (24%), Positives = 28/73 (38%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARA----YVSGLEKAMDRASQQGIILIEGSG 57
EL + R ++ +LKN +AS + +V +KA+ + I S
Sbjct: 142 ELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLNKKKALAHRNLNHCI---SSD 198
Query: 58 PTYATATTFQESL 70
P Y T SL
Sbjct: 199 PRYWYGKTQHSSL 211
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 438 (159.2 bits), Expect = 6.3e-41, P = 6.3e-41
Identities = 104/266 (39%), Positives = 148/266 (55%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 358 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 413
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG++ PG+G DEVG G G G
Sbjct: 414 SVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 473
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 474 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPT-PLGGYNL 532
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L KQL L G R V LEGG++L ++ + A LG +E D
Sbjct: 533 SARCFGYLT---KQLM-GLAGGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 583
Query: 302 -PA-ILYEEPSAKVKQAIERVKHIHS 325
P +L + P+A +++E+V IHS
Sbjct: 584 LPEKVLQQRPNANAVRSMEKVMEIHS 609
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 446 (162.1 bits), Expect = 6.6e-41, P = 6.6e-41
Identities = 109/283 (38%), Positives = 157/283 (55%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L + ++ + + EG+ Y +TF + A GA
Sbjct: 529 PALDSELLTCHSAEYVEHL-RTTEKMKTRDLHR-EGANFDSIYICPSTFACAKLATGAAC 586
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 587 RLVEAVLSGEVLN----GIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRI 642
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ-D-GSY-P-GT-GKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ D G++ P G G +VGR G G T+N+
Sbjct: 643 LIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNV 702
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 703 PWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 758
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 759 AHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDP 801
Score = 408 (148.7 bits), Expect = 7.7e-37, P = 7.7e-37
Identities = 94/279 (33%), Positives = 147/279 (52%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L E Y ++ + A G+ + LV
Sbjct: 135 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ ++ R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++RV I+D
Sbjct: 195 DALMGAEIRN----GMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHG GT F DP + + S H + G + P +G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 310
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A++
Sbjct: 311 TGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGF----AHLT 366
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
L L G + + LEGGYNL +L+ V+ S LG+P
Sbjct: 367 HLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGDP 405
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 101/285 (35%), Positives = 151/285 (52%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRAS-QQGIILIEGSGPTYATATTFQESLA 71
+ +++ P + D+A VH+ AY+ + D G GSG +Y A +L+
Sbjct: 38 LSVQSAEPVTETDMARVHSEAYLDRFKTLSDAGGGNAGEFSPFGSG-SYEIA-----ALS 91
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A A+ D V + + +AL RPPGHHA+ G MGFC+ N+AIA A+
Sbjct: 92 AGLVKRAVFDVVDGTFDN-----AYALSRPPGHHAMRDGSMGFCLLANIAIAIEAARAER 146
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL RV ++D+DVHHGNGT D FY+ D+ +S HQ+ +P G+G E G G GEG+ LN
Sbjct: 147 GLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQENCFPPGSGSGSERGAGAGEGANLN 206
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+ L G+G + +++P F+P+LI+V+ G DA+ DPL+ + +GT+ L
Sbjct: 207 VNLLPGAGHQSYIDAMDILVLPALHAFRPELIIVACGLDANNFDPLSRMTAHSGTFGYLT 266
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
+ A DLCG R V EGGY + + + R G S+
Sbjct: 267 RAVMGAANDLCGGRLVCAHEGGYAEAVVPFCAHEVVRTLAGVESE 311
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 441 (160.3 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 115/327 (35%), Positives = 175/327 (53%)
Query: 21 ASVDDIASVHARAYV-----SGLEKA-MDRASQQGIILIE--GSGPTYATATTFQE--SL 70
A+++++ +VH+ A+ + L + +D GI+ + G+ + T + E S
Sbjct: 696 ATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGIVHLSFVGTAVGVDSDTIWNEVHSS 755
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AA + V + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 756 GAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQR 815
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGS 187
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG++ PG+G DEVG G G G
Sbjct: 816 LNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGF 875
Query: 188 TLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQ 240
+N+ GG GDT T F V++P A F PD++LVS+G+DA H PL
Sbjct: 876 NVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPT-PLGGYN 934
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
+ + L KQL L G R V LEGG++L ++ + A LG +E D
Sbjct: 935 LSAKCFGYLT---KQLM-GLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELD 985
Query: 301 N-PA-ILYEEPSAKVKQAIERVKHIHS 325
P +L + +A ++E+V IHS
Sbjct: 986 PLPEKVLQQRANANAVHSMEKVIEIHS 1012
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 440 (159.9 bits), Expect = 2.4e-40, P = 2.4e-40
Identities = 107/266 (40%), Positives = 150/266 (56%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 744 AVGCVIELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 799
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG++ PG+G DEVG G G G
Sbjct: 800 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFN 859
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GDT T F V++P A F PD++LVS+G+DA H PL
Sbjct: 860 VNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPT-PLGGYNL 918
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L KQL L G R V LEGG++L ++ + A LG +E D
Sbjct: 919 SAKCFGYLT---KQLM-GLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELDP 969
Query: 302 -PA-ILYEEPSAKVKQAIERVKHIHS 325
P +L + +A ++E+V IHS
Sbjct: 970 LPEKVLQQRANANAVHSMEKVIEIHS 995
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 440 (159.9 bits), Expect = 2.4e-40, P = 2.4e-40
Identities = 107/266 (40%), Positives = 150/266 (56%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 752 AVGCVIELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 807
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG++ PG+G DEVG G G G
Sbjct: 808 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFN 867
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GDT T F V++P A F PD++LVS+G+DA H PL
Sbjct: 868 VNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPT-PLGGYNL 926
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L KQL L G R V LEGG++L ++ + A LG +E D
Sbjct: 927 SAKCFGYLT---KQLM-GLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELDP 977
Query: 302 -PA-ILYEEPSAKVKQAIERVKHIHS 325
P +L + +A ++E+V IHS
Sbjct: 978 LPEKVLQQRANANAVHSMEKVIEIHS 1003
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 440 (159.9 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 107/266 (40%), Positives = 150/266 (56%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 770 AVGCVIELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 825
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG++ PG+G DEVG G G G
Sbjct: 826 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFN 885
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GDT T F V++P A F PD++LVS+G+DA H PL
Sbjct: 886 VNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPT-PLGGYNL 944
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L KQL L G R V LEGG++L ++ + A LG +E D
Sbjct: 945 SAKCFGYLT---KQLM-GLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELDP 995
Query: 302 -PA-ILYEEPSAKVKQAIERVKHIHS 325
P +L + +A ++E+V IHS
Sbjct: 996 LPEKVLQQRANANAVHSMEKVIEIHS 1021
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 437 (158.9 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 104/313 (33%), Positives = 166/313 (53%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH+ ++ ++ D + Q + E Y ++ + + G I
Sbjct: 187 ATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEAC 246
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P P GFC+F NVA+AA+ + + ++R+ I
Sbjct: 247 KAVIEGRVKNS----LAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVI 302
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+DP + ++S H ++G YPGT G +++VG G GEG T+N+P
Sbjct: 303 VDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPW 362
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G D F+++I P F PDLI+VS+G+DA D + + T Y +
Sbjct: 363 RSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHT 422
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K +A+ G V LEGGYNL+S+S S + +GEP +N L P A+
Sbjct: 423 LKGIAR---GKLAVI-LEGGYNLDSISKSALAVAKVLVGEPP-----ENTITL--RPQAE 471
Query: 313 VKQAIERVKHIHS 325
+ ++ V I S
Sbjct: 472 AIEVVDEVIKIQS 484
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 437 (158.9 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 104/313 (33%), Positives = 166/313 (53%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH+ ++ ++ D + Q + E Y ++ + + G I
Sbjct: 187 ATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEAC 246
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P P GFC+F NVA+AA+ + + ++R+ I
Sbjct: 247 KAVIEGRVKNS----LAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVI 302
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+DP + ++S H ++G YPGT G +++VG G GEG T+N+P
Sbjct: 303 VDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPW 362
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G D F+++I P F PDLI+VS+G+DA D + + T Y +
Sbjct: 363 RSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHT 422
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K +A+ G V LEGGYNL+S+S S + +GEP +N L P A+
Sbjct: 423 LKGIAR---GKLAVI-LEGGYNLDSISKSALAVAKVLVGEPP-----ENTITL--RPQAE 471
Query: 313 VKQAIERVKHIHS 325
+ ++ V I S
Sbjct: 472 AIEVVDEVIKIQS 484
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 93/205 (45%), Positives = 121/205 (59%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
G AL+RPPGHH+ GFCVF NVAIAAR+AQ+ HGL+R+ I+D+DVHHG G F
Sbjct: 7 GLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFE 66
Query: 155 DDPDIFFLSTH--QDGS---YPGTGKIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHE 208
DDP + + S H + G Y D VG+G G G T+NLP G G+ F
Sbjct: 67 DDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLH 126
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
V++P A F P+L+LVSAG+D+ + DP +Q T + ++ QL + L G R
Sbjct: 127 VLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----GHLTQLLQVLAGGRVCAV 182
Query: 269 LEGGYNLNSLSYSVADSFRAFLGEP 293
LEGGY+L SLS SV RA LG+P
Sbjct: 183 LEGGYHLESLSQSVCMVVRALLGDP 207
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 432 (157.1 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 107/294 (36%), Positives = 157/294 (53%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA+ ++ + H+ YV L +A ++ + + E S Y +TF + A GA
Sbjct: 530 PATEAELLTCHSAEYVGHL-RATEKMKTRELHR-ESSNFDSIYICPSTFACAQLATGAAC 587
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG-LKRV 136
LV++V + + G A++RPPGHHA GFC F +VA+AAR+AQ G R+
Sbjct: 588 RLVEAVLSGEVLN----GAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHALRI 643
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-P-GT-GKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ P G G ++GR G G T+N+
Sbjct: 644 LIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNV 703
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
G GD +H +++P A F P+L+LVSAG+DA DPL Q + Y
Sbjct: 704 AWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGY---- 759
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
A++ L L R + LEGGYNL S+S S+A R+ LG+P P +
Sbjct: 760 AHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPL 813
Score = 417 (151.9 bits), Expect = 9.3e-38, P = 9.3e-38
Identities = 102/307 (33%), Positives = 156/307 (50%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L + Y ++ + A+G+ + LV
Sbjct: 136 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLV 195
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F +VA+AARYAQ+ H ++RV I+D
Sbjct: 196 DAVLGAEIRN----GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 251
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H + G + P G G G+G T+N+P
Sbjct: 252 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 311
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F V++P A F+P L+LV+AG+DA DP + T + A +
Sbjct: 312 VGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGF----AQLT 367
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
L L G + + LEGGYNL +L+ V+ S LG+P E +P A V
Sbjct: 368 HLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLE--SPGAPCRSAQASVS 425
Query: 315 QAIERVK 321
A+E ++
Sbjct: 426 CALEALE 432
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 432 (157.1 bits), Expect = 2.4e-39, P = 2.4e-39
Identities = 107/294 (36%), Positives = 157/294 (53%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA+ ++ + H+ YV L +A ++ + + E S Y +TF + A GA
Sbjct: 544 PATEAELLTCHSAEYVGHL-RATEKMKTRELHR-ESSNFDSIYICPSTFACAQLATGAAC 601
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG-LKRV 136
LV++V + + G A++RPPGHHA GFC F +VA+AAR+AQ G R+
Sbjct: 602 RLVEAVLSGEVLN----GAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHALRI 657
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-P-GT-GKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ P G G ++GR G G T+N+
Sbjct: 658 LIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNV 717
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
G GD +H +++P A F P+L+LVSAG+DA DPL Q + Y
Sbjct: 718 AWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGY---- 773
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
A++ L L R + LEGGYNL S+S S+A R+ LG+P P +
Sbjct: 774 AHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPL 827
Score = 417 (151.9 bits), Expect = 9.5e-38, P = 9.5e-38
Identities = 102/307 (33%), Positives = 156/307 (50%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L + Y ++ + A+G+ + LV
Sbjct: 150 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLV 209
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F +VA+AARYAQ+ H ++RV I+D
Sbjct: 210 DAVLGAEIRN----GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 265
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H + G + P G G G+G T+N+P
Sbjct: 266 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 325
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F V++P A F+P L+LV+AG+DA DP + T + A +
Sbjct: 326 VGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGF----AQLT 381
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
L L G + + LEGGYNL +L+ V+ S LG+P E +P A V
Sbjct: 382 HLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLE--SPGAPCRSAQASVS 439
Query: 315 QAIERVK 321
A+E ++
Sbjct: 440 CALEALE 446
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 430 (156.4 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 104/266 (39%), Positives = 147/266 (55%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 774 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 829
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ + ++D+DVHHGNGT AFY DP + ++S H+ DG++ PG+G DEVG G G G
Sbjct: 830 SVSKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFN 889
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 890 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPT-PLGGYNL 948
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L KQL L G R V LEGG++L ++ + A LG +E D
Sbjct: 949 SAKCFGYLT---KQLM-GLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELDP 999
Query: 302 -PA-ILYEEPSAKVKQAIERVKHIHS 325
P +L + P+A +++E+V IHS
Sbjct: 1000 LPEKVLQQRPNANAVRSMEKVIEIHS 1025
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 428 (155.7 bits), Expect = 5.6e-39, P = 5.6e-39
Identities = 108/294 (36%), Positives = 158/294 (53%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA+ ++ + H+ YV L +A ++ + + EGS Y +TF + A G+
Sbjct: 543 PATDAELLTCHSAEYVGRL-RATEKMKTRELHR-EGSNFDSIYICPSTFACAQLATGSVC 600
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG-LKRV 136
LV++V A + G A++RPPGHHA GFC F +VA+AAR+AQ G R+
Sbjct: 601 RLVEAVLAREVLN----GTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRI 656
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-P-GT-GKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F +DP + ++S H+ G++ P G G +VG+ G G T+N+
Sbjct: 657 LIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNV 716
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
G GD +H +++P A F P+L+LVSAG+DA DPL Q + Y
Sbjct: 717 AWNGPRVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGY---- 772
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
A++ L L R V LEGGYNL S+S S+A R+ LG+P P +
Sbjct: 773 AHLTHLLMGLANGRVVLILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPL 826
Score = 410 (149.4 bits), Expect = 4.8e-37, P = 4.8e-37
Identities = 100/307 (32%), Positives = 158/307 (51%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + IL + Y ++ + A+G+ + LV
Sbjct: 150 AEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLV 209
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A++RPPGHHA G+C+F +VA+AARYAQ+ H ++RV I+D
Sbjct: 210 DAVLRNEIRN----GMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVD 265
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H + G + P +G G G+G T+N+P
Sbjct: 266 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 325
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A +
Sbjct: 326 VGMRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGF----AQLT 381
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
L L G + + LEGGYNL +L+ V+ S LG+P E +P+ A +
Sbjct: 382 HLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPILE--SPSAPCPSAQASLF 439
Query: 315 QAIERVK 321
A+E ++
Sbjct: 440 CALEALE 446
>UNIPROTKB|H9KZE7 [details] [associations]
symbol:H9KZE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
junction assembly" evidence=IEA] [GO:0032703 "negative regulation
of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0071889
"14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
Uniprot:H9KZE7
Length = 951
Score = 426 (155.0 bits), Expect = 5.9e-39, P = 5.9e-39
Identities = 102/265 (38%), Positives = 150/265 (56%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG+ L VA+ + + GFA++RPPGHHA P MGFC F +VAIAAR Q+
Sbjct: 640 AAGSVTELAFKVASRELKN----GFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKG 695
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
L ++ I+D+DVHHGNGT FY DPD+ ++S H+ DG++ PG+G DEVG G GEG
Sbjct: 696 KLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFN 755
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVSAG+DA H PL +
Sbjct: 756 VNIAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHP-PPLGGYKV 814
Query: 242 TTGTY-YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
+ + YM KQL L G V LEGG++L ++ ++++ + L P +
Sbjct: 815 SAKCFGYMT----KQLMS-LAGGAIVLALEGGHDLTAIC-DASEAYPSHLS-PWQLDPLP 867
Query: 301 NPAILYEEPSAKVKQAIERVKHIHS 325
+ + ++P+A +++E V + S
Sbjct: 868 EES-MRQKPNANAVRSLEAVIQVQS 891
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 421 (153.3 bits), Expect = 6.3e-39, P = 6.3e-39
Identities = 101/283 (35%), Positives = 152/283 (53%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPT--YATATTFQESLAAAGAGIA 78
A+++++ VH++ + ++ S + + +E + Y + F LA G+ I
Sbjct: 115 ATLEELLQVHSQEMYDRVTNT-EKMSHEDLANLEKISDSLYYNNESAFCARLAC-GSAIE 172
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR-YAQR-AHGLKRV 136
+V + + FA++RPPGHHA P P GFC+F NV++ AR QR +KRV
Sbjct: 173 TCTAVVTGQVKN----AFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRV 228
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNL 191
I+D+D+HHGNGT AFYDDP++ ++S H ++G YPGT G + G G G G T+N+
Sbjct: 229 LIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNI 288
Query: 192 PLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD F V++P A F PDL++VS G+DA D + T Y
Sbjct: 289 PWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAY---- 344
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ Q+ L + LEGGYNL+S+S S ++ LG P
Sbjct: 345 AHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIP 387
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 410 (149.4 bits), Expect = 6.4e-39, Sum P(2) = 6.4e-39
Identities = 97/244 (39%), Positives = 135/244 (55%)
Query: 64 TTFQESLAAAGAGIAL--VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
TT+ E A A +A V +A + D GFA++RPPGHHA MGFC F ++A
Sbjct: 928 TTWNEHHTATAARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIA 987
Query: 122 IAARYA-QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKID 177
IAA+ QR ++R+ I+D+DVHHGNGT AFY PDI +LS H+ DG++ PGTG
Sbjct: 988 IAAKLLRQRMPEVRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGTGGPT 1047
Query: 178 EVGRGDGEGSTLNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA--- 230
E G G G G +N+ G GD F V++P A+ F PD++LVS+G+DA
Sbjct: 1048 ECGSGAGLGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATG 1107
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
H PL + + + + QLA + V LEGGY+L ++ S + RA L
Sbjct: 1108 HPA-PLGGYHVSPACFGFMTRELLQLAN----GKVVLALEGGYDLAAICDSAQECVRALL 1162
Query: 291 GEPS 294
G+P+
Sbjct: 1163 GDPA 1166
Score = 47 (21.6 bits), Expect = 6.4e-39, Sum P(2) = 6.4e-39
Identities = 20/59 (33%), Positives = 25/59 (42%)
Query: 19 SPAS-VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
S AS V D+A A A + L + Q G + GSG A + AAA AG
Sbjct: 454 SQASLVGDVAPPQAHAASTILPSSSSYMQQLGSVA--GSGVNLHAAAVAAAAAAAAAAG 510
Score = 39 (18.8 bits), Expect = 4.4e-38, Sum P(2) = 4.4e-38
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 59 TYATATT--FQESLAAAGAGIALVDSVAASKN 88
T AT+T+ E+LAAA A A AS N
Sbjct: 674 TIATSTSQNLPEALAAAAAAAAYRAPHNASSN 705
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 416 (151.5 bits), Expect = 9.3e-39, P = 9.3e-39
Identities = 102/279 (36%), Positives = 152/279 (54%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYAT-ATTFQESLAAAGAGIALV 80
S ++I VH+ ++ K+ +++ + I G+ ++ T+ + A GA + LV
Sbjct: 58 SEEEILLVHSSEHLEAA-KSTQTMNEEELKRISGNYDSFFFHPNTYHCARLAVGAALQLV 116
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV + K G AL+RPPGHH+ GFC+F NVAIAA YA+ +GL+R+ I+D
Sbjct: 117 DSVMSGKVCN----GMALVRPPGHHSQRNAANGFCLFNNVAIAAEYAKLKYGLQRILIVD 172
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGK--IDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F +D + + S H+ +P + D VG G G+G +NLP
Sbjct: 173 WDVHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNK 232
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G++ F V++P A F P+L+LVS+GYD+ + DP + T + L +
Sbjct: 233 VGMGNSDYLAAFFHVLLPVAFEFDPELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLM 292
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
QLA G CV LEGGY+L SLS SV + + L +P
Sbjct: 293 QLAH---GKLCVI-LEGGYHLKSLSESVCMTVKTLLRDP 327
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 92/265 (34%), Positives = 138/265 (52%)
Query: 15 LKNFSPASVDD--IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
L + P D I VH ++++ L +R L +GP + + + A
Sbjct: 66 LSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGGDAGELTP-AGPA-----SLEIARLA 119
Query: 73 AGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
G I +D+V A++N + L RPPGHHA+P MGFC+ N A+ R+ Q+
Sbjct: 120 VGGVIVAMDAVMTGAAEN------AYVLCRPPGHHALPDLAMGFCLLANAALGIRHVQKT 173
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTL 189
+GL R+ ++D+DVHHGNGT F DDP + +S HQD +P +G I G G+ S +
Sbjct: 174 YGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQDNLFPLDSGGIGVKGAGN---SNI 230
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP GSG A R F ++++P F P+LI++ GYDA +DPL ++ + +
Sbjct: 231 NVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASAVDPLGVCMLSSEDFRWM 290
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYN 274
+ LA C R V EGGY+
Sbjct: 291 TRQVMTLADKHCQGRIVVTHEGGYS 315
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 92/265 (34%), Positives = 138/265 (52%)
Query: 15 LKNFSPASVDD--IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
L + P D I VH ++++ L +R L +GP + + + A
Sbjct: 66 LSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGGDAGELTP-AGPA-----SLEIARLA 119
Query: 73 AGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
G I +D+V A++N + L RPPGHHA+P MGFC+ N A+ R+ Q+
Sbjct: 120 VGGVIVAMDAVMTGAAEN------AYVLCRPPGHHALPDLAMGFCLLANAALGIRHVQKT 173
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTL 189
+GL R+ ++D+DVHHGNGT F DDP + +S HQD +P +G I G G+ S +
Sbjct: 174 YGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQDNLFPLDSGGIGVKGAGN---SNI 230
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP GSG A R F ++++P F P+LI++ GYDA +DPL ++ + +
Sbjct: 231 NVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASAVDPLGVCMLSSEDFRWM 290
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYN 274
+ LA C R V EGGY+
Sbjct: 291 TRQVMTLADKHCQGRIVVTHEGGYS 315
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 91/311 (29%), Positives = 153/311 (49%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA V ++ H Y+ L +A D++ ++ E + T+ + +++ +L AAG ++
Sbjct: 69 PAIVSELLMFHTSEYIEKLVEA-DKSGER----CEIAAGTFMSPGSWEAALLAAGTTLSA 123
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+ + + + +AL+RPPGHH+ P G+C N A+A + A + RV +I
Sbjct: 124 MQHILDCHGK----IAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVI 179
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPLP 194
D DVH+GNGT + FY + +S H + S+P G IDE+G G G LN+PLP
Sbjct: 180 DIDVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLP 239
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G+GD +E++VP +RF PD++++ G D+ DP T Y + ++
Sbjct: 240 NGTGDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMR 299
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
+A++ R + EGGY++ +Y + L P +P Y E A
Sbjct: 300 GVAEEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEP--HLSDPIAYYPEEEANAV 357
Query: 315 QAIERVKHIHS 325
A+E +K H+
Sbjct: 358 AAVESIKTYHT 368
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 420 (152.9 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 99/267 (37%), Positives = 140/267 (52%)
Query: 52 LIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGP 111
L +G Y + TF+ SL +AG I S+ + + + GFA+IRPPGHHA
Sbjct: 186 LDKGQTSVYVGSLTFEASLISAGGAIETCKSIVSGQIKN----GFAVIRPPGHHAEQDSA 241
Query: 112 MGFCVFGNVAIAARYAQRAHG--LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QD 167
MGFC+F NV IAA+ Q + ++V I+D+DVHHGNG + FY+DP++ ++S H ++
Sbjct: 242 MGFCIFNNVPIAAKVCQAEYPEICQKVLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKN 301
Query: 168 GS-YPGT--------GKIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRF 217
G YPG G I G G G G +N+ G GD F ++I+P A F
Sbjct: 302 GEFYPGKPENPMTADGSISSCGSGPGLGRNINIGWDDQGMGDGEYIAAFQKIIMPIAHEF 361
Query: 218 KPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNS 277
PDL+++SAG+DA D L F T Y A++ + L R LEGGYNL++
Sbjct: 362 NPDLVIISAGFDAAAGDQLGGC-FVTPPCY---AHMTHMLMSLAHGRVAVCLEGGYNLSA 417
Query: 278 LSYSVADSFRAFLGEPSKASEFDNPAI 304
+S S R +GEP +P I
Sbjct: 418 ISKSALAVARTLMGEPPPKMGMASPKI 444
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 421 (153.3 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 102/264 (38%), Positives = 143/264 (54%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI A+ Q+
Sbjct: 508 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 563
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFYDDP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 564 SVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYN 623
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 624 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 682
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 683 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 736
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++PS +E+V I S
Sbjct: 737 -AVLQQKPSINAVATLEKVIEIQS 759
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 424 (154.3 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 112/316 (35%), Positives = 167/316 (52%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA+ ++ + H+ YVS + +A ++ + + EG+ Y TF + AAGA
Sbjct: 539 PATDAELLACHSAEYVSRI-RATEKMRTRELHR-EGANYDSIYICPGTFACAQLAAGAAC 596
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG-LKRV 136
LV++V A + G A++RPPGHHA GFC F +VA+AAR+AQ G R+
Sbjct: 597 RLVEAVLAGEVLN----GIAVVRPPGHHAERDSACGFCFFNSVAVAARHAQAISGHALRI 652
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-P-GT-GKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F +DP + ++S H+ G++ P G G ++G+ G G T+N+
Sbjct: 653 LIVDWDVHHGNGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNV 712
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
G GD +H +++P A F P+L+LVSAG+DA DPL Q + Y
Sbjct: 713 AWNGPRVGDPEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPECY---- 768
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL--YEE 308
A++ L L R + LEGGYNL S+S S+A R+ LG D+P +L
Sbjct: 769 AHLTHLLMGLANGRIILILEGGYNLISISESMAACTRSLLG--------DSPPLLTLLRP 820
Query: 309 PSAKVKQAIERVKHIH 324
P ++ +I IH
Sbjct: 821 PLSRALASIAETTQIH 836
Score = 415 (151.1 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 102/307 (33%), Positives = 156/307 (50%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L + Y ++ + A+G+ + LV
Sbjct: 146 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYTCACLASGSVLRLV 205
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F +VA+AARYAQ+ H ++RV I+D
Sbjct: 206 DAVLGAEIRN----GMAIIRPPGHHAQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVD 261
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H + G + P G G G+G T+N+P
Sbjct: 262 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 321
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A +
Sbjct: 322 VGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGF----AQLT 377
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
L L G + + LEGGYNL SL+ V+ S LG+P EF P A +
Sbjct: 378 HLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPLLEF--PGAPCPSAQASLS 435
Query: 315 QAIERVK 321
A+E ++
Sbjct: 436 CALEALE 442
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 421 (153.3 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 102/264 (38%), Positives = 143/264 (54%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI A+ Q+
Sbjct: 590 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 645
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFYDDP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 646 SVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYN 705
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 706 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 764
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 765 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 818
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++PS +E+V I S
Sbjct: 819 -AVLQQKPSINAVATLEKVIEIQS 841
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 421 (153.3 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 102/264 (38%), Positives = 143/264 (54%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI A+ Q+
Sbjct: 590 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 645
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFYDDP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 646 SVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYN 705
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 706 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 764
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 765 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 818
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++PS +E+V I S
Sbjct: 819 -AVLQQKPSINAVATLEKVIEIQS 841
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 422 (153.6 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 102/264 (38%), Positives = 144/264 (54%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI A+ Q+
Sbjct: 795 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 850
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFY+DP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 851 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYN 910
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P AQ F PD++LVSAG+DA H L PL
Sbjct: 911 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 969
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 970 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 1023
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++PS +E+V I S
Sbjct: 1024 -AVLQQKPSVNAVATLEKVIEIQS 1046
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 421 (153.3 bits), Expect = 2.9e-38, P = 2.9e-38
Identities = 102/264 (38%), Positives = 143/264 (54%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI A+ Q+
Sbjct: 793 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 848
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFYDDP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 849 NVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGMGYN 908
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 909 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 967
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 968 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 1021
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++PS +E+V I S
Sbjct: 1022 -AVLQQKPSINAVATLEKVIEIQS 1044
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 419 (152.6 bits), Expect = 4.9e-38, P = 4.9e-38
Identities = 96/241 (39%), Positives = 136/241 (56%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y ++TF + AAGA LV++V A + G A++RPPGHHA P GFC F +
Sbjct: 570 YICSSTFACAQLAAGAACRLVEAVLAGEVLN----GVAVVRPPGHHAEPDAACGFCFFNS 625
Query: 120 VAIAARYAQRAHG-LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-P-GT- 173
VA+AAR+AQ G R+ I+D+D+HHGNGT F +DP + ++S H+ G++ P G
Sbjct: 626 VAVAARHAQAISGHALRILIVDWDIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNE 685
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
G +G+ G G T+N+ G GD +H +++P A F P+L+LVSAG+DA
Sbjct: 686 GACTRIGKATGTGFTVNVAWNGPRMGDADYLAAWHRLVLPVAYEFNPELVLVSAGFDAAR 745
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
DPL Q + Y L + LA + LEGGYNL S+S S+A R+ LG+
Sbjct: 746 GDPLGGCQVSPEGYAHLTHQLMGLAN----GHIILILEGGYNLTSISESMAACTRSLLGD 801
Query: 293 P 293
P
Sbjct: 802 P 802
Score = 404 (147.3 bits), Expect = 2.0e-36, P = 2.0e-36
Identities = 96/284 (33%), Positives = 148/284 (52%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E ++ +L + Y ++ + A+G+ + LV
Sbjct: 136 AEKEELMLVHSLEYIDLMETTQYMNEEELHVLADTYDSVYLHPNSYTCACLASGSVLRLV 195
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F +VA+AARYAQ+ H ++RV I+D
Sbjct: 196 DAVLEAEIRN----GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVD 251
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG G AF DP + + S H + G + P G G G+G T+N+P
Sbjct: 252 WDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQ 311
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F V++P A F+P L+LV+AG+DA DP + T + A +
Sbjct: 312 VGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGF----AQLT 367
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L L + + LEGGYNL+SL+ V+ + LG+P E
Sbjct: 368 HLLMGLAEGKLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLE 411
>MGI|MGI:1891835 [details] [associations]
symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
"nervous system development" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=ISO] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=ISO]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
Length = 938
Score = 417 (151.9 bits), Expect = 5.3e-38, P = 5.3e-38
Identities = 115/330 (34%), Positives = 173/330 (52%)
Query: 21 ASVDDIASVHARAYV--------SGLE----KAMDRASQQGIILIEGSGPTYATATTFQE 68
AS++++ SVH+ +V S L+ K +Q+ +++ G T T + E
Sbjct: 559 ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNE 618
Query: 69 ---SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
S AA A ++ D +R + GFA++RPPGHHA MGFC F +VAIA R
Sbjct: 619 LHSSNAARWAAGSVTDLAFKVASR-ELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACR 677
Query: 126 YAQRAHG-LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGR 181
Q+ HG ++ I+D+DVHHGNGT FY DP + ++S H+ DG++ PG+G +DEVG
Sbjct: 678 QLQQ-HGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGT 736
Query: 182 GDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
G GEG +N+ GG GD F V++P A+ F PDL+LVSAG+DA P A
Sbjct: 737 GSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHP-A 795
Query: 238 SLQFTTGTYYMLA---ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
L G Y++ A + Q +L G V LEGG++L ++ + A LG +
Sbjct: 796 PL----GGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLG--N 849
Query: 295 KASEFDNPAILYEEPSAKVKQAIERVKHIH 324
K + ++P+ +++E V +H
Sbjct: 850 KVDPLSEES-WKQKPNLSAIRSLEAVVRVH 878
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 418 (152.2 bits), Expect = 5.6e-38, P = 5.6e-38
Identities = 106/298 (35%), Positives = 155/298 (52%)
Query: 40 KAMDRASQQGIILIEGSGPTYATATTFQE--SLAAAGAGIALVDSVAASKNRPDPPLGFA 97
K + SQ+ L+ G + T + E S AA + V +AA + GFA
Sbjct: 717 KLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSAGAARMAVGCVIELAARVASRELKNGFA 776
Query: 98 LIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDP 157
++RPPGHHA MGFC F ++AI A+Y + + ++ I+D DVHHGNGT AFY DP
Sbjct: 777 VVRPPGHHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADP 836
Query: 158 DIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVI 210
I ++S H+ +G++ PG+G +EVG G GEG +N+ GG GD T F VI
Sbjct: 837 SILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGFNINIAWTGGLDPPMGDVEYLTAFRTVI 896
Query: 211 VPCAQRFKPDLILVSAGYDA---HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVF 267
+P A F P+++LVSAG+DA H PL + T + L KQL K L R V
Sbjct: 897 MPAANEFDPEIVLVSAGFDAVEGHD-PPLGGYKVTAKCFGHLT---KQLLK-LADGRVVL 951
Query: 268 FLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
LEGG++L ++ + A LG + D I+++ P+ ++++ I S
Sbjct: 952 ALEGGHDLTAICDASEACINALLGNELEPLPED---IVHQIPNMNAIASLKKTTEIQS 1006
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 91/264 (34%), Positives = 142/264 (53%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E+ A+++D+ VH R+Y+ + D + + L GP F+ ++ +
Sbjct: 61 LEMVTGGSATIEDVLRVHPRSYIDEFRRLSDSGGGE-LGLRTPFGPG-----AFEIAMLS 114
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG I V+ V + R +AL RPPGHH +P P GFC+ N+AIA A +A G
Sbjct: 115 AGLVIDAVEGVVQGRYRN----AYALSRPPGHHCLPDWPNGFCLLANIAIAIE-AAKAKG 169
Query: 133 LK-RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
L +V ++D+DVHHGNGT +Y+ D+ +S HQD YP TG ID+ G+G G G +N
Sbjct: 170 LLGKVAVLDWDVHHGNGTEAIYYERDDVLTISIHQDRCYPHDTGSIDDQGKGAGLGFNMN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP G G A +I+P + F DL++++ G+DA DPLA + + T+ +
Sbjct: 230 IPLPPGCGHNAYVEATERLIIPKLKAFDADLVIIACGFDAGGFDPLARMMCSAETFREMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+ Q++ + V EGGY+
Sbjct: 290 RRVMQVSD----GKLVAAHEGGYS 309
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 416 (151.5 bits), Expect = 7.1e-38, P = 7.1e-38
Identities = 114/330 (34%), Positives = 170/330 (51%)
Query: 21 ASVDDIASVHARAYV--------SGLE----KAMDRASQQGIILIEGSGPTYATATTFQE 68
AS++++ SVH+ +V S L+ K +Q+ +++ G T T + E
Sbjct: 571 ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNE 630
Query: 69 ---SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
S AA A ++ D +R + GFA++RPPGHHA MGFC F +VAIA R
Sbjct: 631 LHSSNAARWAAGSVTDLAFKVASR-ELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACR 689
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRG 182
Q+ ++ I+D+DVHHGNGT FY DP + ++S H+ DG++ PG+G +DEVG G
Sbjct: 690 QLQQQGKASKILIMDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAG 749
Query: 183 DGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
GEG +N+ GG GD F V++P A+ F PDL+LVSAG+DA P A
Sbjct: 750 SGEGFNVNVAWAGGLDPPMGDPEYLAAFRMVVMPIAREFSPDLVLVSAGFDAAEGHP-AP 808
Query: 239 LQFTTGTYYMLA---ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
L G Y++ A + Q L G V LEGG++L ++ + A LG +K
Sbjct: 809 L----GGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLG--NK 862
Query: 296 ASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
++P+ +++E V +HS
Sbjct: 863 VDPLSEEG-WKQKPNLNAIRSLEAVIRVHS 891
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 416 (151.5 bits), Expect = 7.1e-38, P = 7.1e-38
Identities = 113/330 (34%), Positives = 171/330 (51%)
Query: 21 ASVDDIASVHARAYV--------SGLE----KAMDRASQQGIILIEGSGPTYATATTFQE 68
AS++++ SVH+ +V S L+ K +Q+ +++ G T T + E
Sbjct: 572 ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNE 631
Query: 69 ---SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
S AA A ++ D +R + GFA++RPPGHHA MGFC F +VAIA R
Sbjct: 632 LHSSNAARWAAGSVTDLAFKVASR-ELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACR 690
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRG 182
Q+ ++ I+D+DVHHGNGT FY DP + ++S H+ DG++ PG+G +DEVG G
Sbjct: 691 QLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAG 750
Query: 183 DGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
GEG +N+ GG GD F V++P A+ F PDL+LVSAG+DA P A
Sbjct: 751 SGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHP-AP 809
Query: 239 LQFTTGTYYMLA---ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
L G Y++ A + Q +L G V LEGG++L ++ + A LG ++
Sbjct: 810 L----GGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLG--NR 863
Query: 296 ASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
++P+ +++E V +HS
Sbjct: 864 VDPLSEEG-WKQKPNLNAIRSLEAVIRVHS 892
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 415 (151.1 bits), Expect = 9.9e-38, P = 9.9e-38
Identities = 111/330 (33%), Positives = 169/330 (51%)
Query: 21 ASVDDIASVHARAYV--------SGLE----KAMDRASQQGIILIEGSGPTYATATTFQE 68
AS++++ SVH+ +V S L+ K +Q+ +++ G T T + E
Sbjct: 608 ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNE 667
Query: 69 ---SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
S AA A ++ D +R + GFA++RPPGHHA MGFC F +VAIA R
Sbjct: 668 LHSSNAARWAAGSVTDLAFKVASR-ELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACR 726
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRG 182
Q+ ++ I+D+DVHHGNGT FY DP++ ++S H+ DG++ PG+G +DEVG G
Sbjct: 727 QLQQQGKASKILIVDWDVHHGNGTQQTFYQDPNVLYISLHRHDDGNFFPGSGAVDEVGAG 786
Query: 183 DGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDP 235
GEG +N+ GG GD F V++P A+ F PDL+LVSAG+DA H P
Sbjct: 787 SGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHP-PP 845
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
L + + + + LA G V LEGG++L ++ + A LG +K
Sbjct: 846 LGGYHVSAKCFGYMTQQLMSLA----GGAVVLALEGGHDLTAICDASEACVAALLG--NK 899
Query: 296 ASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
++P+ +++E V +HS
Sbjct: 900 VDPLSEEG-WKQKPNLNAIRSLEAVIRVHS 928
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 405 (147.6 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 97/256 (37%), Positives = 141/256 (55%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ Y++ ++K ++ L + Y TF + AAGA + LV
Sbjct: 55 ASEEELGLVHSPEYIALVQKTQTLDKEELHTLSKQYDAVYFHPDTFHCARLAAGAALRLV 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V G AL+RPPGHH+ GFCVF NVAIAAR+A++ +GL+R+ I+D
Sbjct: 115 DAVLTGAVHN----GVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-P--GTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG G F DDP + + S H + G++ P D VGRG G+G T+NLP
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQ 230
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + A++
Sbjct: 231 VGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AHLT 286
Query: 255 QLAKDLCGSRCVFFLE 270
QL + L G R LE
Sbjct: 287 QLLQVLAGGRICAVLE 302
>UNIPROTKB|F1LSN5 [details] [associations]
symbol:F1LSN5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 IPI:IPI01016416
Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
Length = 932
Score = 414 (150.8 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 115/330 (34%), Positives = 172/330 (52%)
Query: 21 ASVDDIASVHARAYV--------SGLE----KAMDRASQQGIILIEGSGPTYATATTFQE 68
AS++++ SVH+ +V S L+ K +Q+ +++ G T T + E
Sbjct: 553 ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNE 612
Query: 69 ---SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
S AA A ++ D +R + GFA++RPPGHHA MGFC F +VAIA R
Sbjct: 613 LHSSNAARWAAGSVTDLAFKVASR-ELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACR 671
Query: 126 YAQRAHG-LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGR 181
Q+ HG ++ I+D+DVHHGNGT FY DP + ++S H+ DG++ PG+G +DEVG
Sbjct: 672 QLQQ-HGKASKILIVDWDVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGSGAVDEVGT 730
Query: 182 GDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
G GEG +N+ GG GD F V++P A+ F PDL+LVSAG+DA P A
Sbjct: 731 GSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHP-A 789
Query: 238 SLQFTTGTYYMLA---ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
L G Y++ A + Q L G V LEGG++L ++ + A LG +
Sbjct: 790 PL----GGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLG--N 843
Query: 295 KASEFDNPAILYEEPSAKVKQAIERVKHIH 324
K + ++P+ +++E V +H
Sbjct: 844 KVDPLSQES-WKQKPNLNAIRSLEAVVRVH 872
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 415 (151.1 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/283 (37%), Positives = 148/283 (52%)
Query: 55 GSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGF 114
G G T + S AA + V +A + GFA++RPPGHHA PMGF
Sbjct: 721 GVGVDSDTIWSEVHSSGAARLAVGCVVELAFKVATGELKNGFAVVRPPGHHAEESTPMGF 780
Query: 115 CVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-P 171
C F +VAIAA+ Q+ + + ++D+DVHHGNGT AFY DP + ++S H+ DG++ P
Sbjct: 781 CYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFP 840
Query: 172 GTGKIDEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAG 227
G+G DEVG G G G +N+ GG GD F V++P A F PD++LVS+G
Sbjct: 841 GSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSG 900
Query: 228 YDA---HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVAD 284
+DA H PL + + L KQL L G R V LEGG++L ++ +
Sbjct: 901 FDAVEGHPT-PLGGYNLSAKCFGYLT---KQLM-GLAGGRVVLALEGGHDLTAICDASEA 955
Query: 285 SFRAFLGEPSKASEFDN-PA-ILYEEPSAKVKQAIERVKHIHS 325
A LG +E D P +L + P +++E+V IHS
Sbjct: 956 CVSALLG-----NELDPLPEKVLQQRPYDNSVRSMEKVIDIHS 993
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 410 (149.4 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 98/281 (34%), Positives = 146/281 (51%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I H+ Y+ +++ ++ + + Y + + AAGA + LV
Sbjct: 110 ATEQEILLAHSEEYLEAVKQTPGMNVEELMAFSKKYNDVYFHQNIYHCAKLAAGATLQLV 169
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV + R G AL+RPPGHH+ GFCVF NVAIAA YA++ + L R+ I+D
Sbjct: 170 DSVMKREVRN----GMALVRPPGHHSQRSAANGFCVFNNVAIAALYAKKNYNLNRILIVD 225
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGKID--EVGRGDGEGSTLNLPLP- 194
+DVHHG G F +DP + + S H+ +P + D VG+G G G +NLP
Sbjct: 226 WDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNK 285
Query: 195 -GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G + + FH V++P A F P+L++VSAG+D+ + DP + + L +
Sbjct: 286 VGMTNSDYLAAFFH-VLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPEIFAHLTHLL 344
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
LA G CV LEGGYNL SL SV + + LG+P+
Sbjct: 345 MPLA---AGKMCVV-LEGGYNLTSLGQSVCQTVHSLLGDPT 381
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 407 (148.3 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 99/264 (37%), Positives = 142/264 (53%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI + Q+
Sbjct: 344 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKL 399
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFY+DP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 400 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYN 459
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 460 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 518
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 519 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 572
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++P+ +E+V I S
Sbjct: 573 -AVLQQKPNINAVATLEKVIGIQS 595
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 412 (150.1 bits), Expect = 2.2e-37, P = 2.2e-37
Identities = 112/329 (34%), Positives = 170/329 (51%)
Query: 21 ASVDDIASVHARAYV--------SGLE----KAMDRASQQGIILIEGSGPTYATATTFQE 68
AS++++ SVH+ +V S L+ K +Q+ +++ G T T + E
Sbjct: 628 ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNE 687
Query: 69 ---SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
S AA A ++ D +R + GFA++RPPGHHA MGFC F +VAIA R
Sbjct: 688 LHSSNAARWAAGSVTDLAFKVASR-ELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACR 746
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRG 182
Q+ ++ I+D+DVHHGNGT FY DP + ++S H+ DG++ PG+G +DEVG G
Sbjct: 747 QLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAG 806
Query: 183 DGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
GEG +N+ GG GD F V++P A+ F PDL+LVSAG+DA P A
Sbjct: 807 SGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHP-AP 865
Query: 239 LQFTTGTYYMLA---ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
L G Y++ A + Q +L G V LEGG++L ++ + A LG ++
Sbjct: 866 L----GGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLG--NR 919
Query: 296 ASEFDNPAILYEEPSAKVKQAIERVKHIH 324
++P+ +++E V +H
Sbjct: 920 VDPLSEEG-WKQKPNLNAIRSLEAVIRVH 947
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 412 (150.1 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 100/264 (37%), Positives = 143/264 (54%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI A+ Q+
Sbjct: 804 AVGCLLELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 859
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFY+DP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 860 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYN 919
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 920 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 978
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 979 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 1032
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++P+ +E+V I S
Sbjct: 1033 -AVLQQKPNINAVATLEKVIEIQS 1055
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 410 (149.4 bits), Expect = 4.5e-37, P = 4.5e-37
Identities = 100/264 (37%), Positives = 143/264 (54%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI A+ Q+
Sbjct: 804 AVGCLLELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 859
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFY+DP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 860 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYN 919
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 920 VNVAWIGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 978
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 979 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 1032
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++P+ +E+V I S
Sbjct: 1033 -AVLQQKPNINAVATLEKVIEIQS 1055
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 409 (149.0 bits), Expect = 5.8e-37, P = 5.8e-37
Identities = 99/264 (37%), Positives = 142/264 (53%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI + Q+
Sbjct: 807 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKL 862
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFY+DP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 863 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYN 922
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 923 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 981
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 982 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 1035
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++P+ +E+V I S
Sbjct: 1036 -AVLQQKPNINAVATLEKVIEIQS 1058
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 408 (148.7 bits), Expect = 5.9e-37, P = 5.9e-37
Identities = 98/265 (36%), Positives = 143/265 (53%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I L VA+ + + GFA++RPPGHHA MGFC F +VAI A+Y +
Sbjct: 754 AVGCVIELASKVASGELKN----GFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQL 809
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D DVHHGNGT AFY DP I ++S H+ +G++ PG+G +EVG G GEG
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYN 869
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F ++ P A+ F PD++LVSAG+DA H PL +
Sbjct: 870 INIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHT-PPLGGYKV 928
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L KQL L R V LEGG++L ++ + A LG + D
Sbjct: 929 TAKCFGHLT---KQLMT-LADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLAED- 983
Query: 302 PAILYEEPSAKVKQAIERVKHIHSL 326
IL++ P+ +++++ I S+
Sbjct: 984 --ILHQSPNMNAVISLQKIIEIQSM 1006
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 98/265 (36%), Positives = 140/265 (52%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I L VA+ + + GFA++RPPGHHA MGFC F +VAI A+Y +
Sbjct: 182 AVGCVIELASKVASGELKN----GFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQL 237
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D DVHHGNGT AFY DP I ++S H+ +G++ PG+G +EVG G GEG
Sbjct: 238 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGVGLGEGYN 297
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A+ F PD++LVSAG+DA H PL +
Sbjct: 298 VNIAWTGGLDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHT-PPLGGYK- 355
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EPSKASEFD 300
T KQL L R LEGG++L ++ + A LG EP E D
Sbjct: 356 VTAKCNGFGHLTKQLMT-LANGRVALALEGGHDLTAICDASEACINALLGNEPGSLEE-D 413
Query: 301 NPAILYEEPSAKVKQAIERVKHIHS 325
+L++ + ++++ I S
Sbjct: 414 ---VLHQSVNTNAAASLQKTIEIQS 435
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 408 (148.7 bits), Expect = 6.9e-37, P = 6.9e-37
Identities = 99/264 (37%), Positives = 142/264 (53%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI + Q+
Sbjct: 772 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKL 827
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFY+DP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 828 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGIGYN 887
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 888 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 946
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 947 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 1000
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++P+ +E+V I S
Sbjct: 1001 -AVLQQKPNINAVATLEKVIEIQS 1023
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 408 (148.7 bits), Expect = 7.3e-37, P = 7.3e-37
Identities = 99/264 (37%), Positives = 142/264 (53%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI + Q+
Sbjct: 799 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKL 854
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFY+DP + ++S H+ +G++ PG+G +EVG G G G
Sbjct: 855 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGIGYN 914
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 915 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 973
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 974 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLSV--ELQPLDE 1027
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++P+ +E+V I S
Sbjct: 1028 -AVLQQKPNINAVATLEKVIEIQS 1050
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 402 (146.6 bits), Expect = 2.9e-36, P = 2.9e-36
Identities = 98/264 (37%), Positives = 141/264 (53%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I L VA+ + + GFA++RPPGHHA MGFC F +VAI A+Y +
Sbjct: 756 AVGCVIELASKVASGELKN----GFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQL 811
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D DVHHGNGT AFY DP I ++S H+ +G++ PG+G +EVG G GEG
Sbjct: 812 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYN 871
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V+ P A+ F PD++LVSAG+DA H PL +
Sbjct: 872 INIAWTGGLDPPMGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHA-PPLGGYKV 930
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L KQL L V LEGG++L ++ + A LG + D
Sbjct: 931 TAKCFGHLT---KQLMT-LADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLAED- 985
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
IL++ P+ +++++ I S
Sbjct: 986 --ILHQTPNMNAVISLQKIIEIQS 1007
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 392 (143.0 bits), Expect = 9.6e-36, P = 9.6e-36
Identities = 89/231 (38%), Positives = 130/231 (56%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y + + + AAG+ + + + VA + GFA++RPPGHHA MGFC+F N
Sbjct: 150 YLNGGSSEAAYLAAGSVVKVAEKVAEG----ELDCGFAIVRPPGHHAESDEAMGFCLFNN 205
Query: 120 VAIAARYA--QRAH-GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD--GS-YP-G 172
VA+AA + +R +K++ I+D+D+HHGNGT F+ D + S H+ GS YP G
Sbjct: 206 VAVAASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFG 265
Query: 173 T-GKIDEVGRGDGEGSTLNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
G + VG G GEG +N+P GG GD V++ +++P + FKPD+IL+SAG+DA
Sbjct: 266 DDGDFNMVGEGPGEGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDA 325
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ DPL T Y ++ + + A + V LEGGYNL SL S
Sbjct: 326 AIGDPLGGCCVTPYGYSVMLKKLMEFAH----GKIVLALEGGYNLESLGKS 372
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 393 (143.4 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 102/273 (37%), Positives = 144/273 (52%)
Query: 59 TYAT-ATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 117
TY A+T + AAG I L VA + + GFA IRPPGHHA + MGFC F
Sbjct: 565 TYFNDASTQTAARLAAGTLIELSSQVAEGRLKN----GFACIRPPGHHAEHEQAMGFCFF 620
Query: 118 GNVAIAARYAQRAHGLK--RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD--GSY-PG 172
NVA+A + Q + + ++ IID+DVHHGNGT +F +DP++ ++S H+ G++ PG
Sbjct: 621 NNVAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPG 680
Query: 173 TGKIDEVGRGDGEGSTLNLPLPGG-SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH 231
TG + EVG+ D +G T+N+P G D + VI P F PD I+VSAG+DA
Sbjct: 681 TGSVTEVGKNDAKGLTVNVPFSGDVMRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDAC 740
Query: 232 VLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
P A + T M K L G + V LEGGY+L S+S + +A +G
Sbjct: 741 HGHPNALGGYEV-TPEMFGYMTKSLLNYASG-KVVLALEGGYDLKSISEAAQQCVQALIG 798
Query: 292 EPSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
E A + A L P+ + +++V IH
Sbjct: 799 ESDDAGRLSSVA-LESLPNPSAVETLQKVIAIH 830
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 88/273 (32%), Positives = 139/273 (50%)
Query: 8 RGSEIIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP--TYATA 63
+G I + SP A+ ++IA +H Y++ +++A + ++ I + G G T
Sbjct: 36 KGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFP 95
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
+ S G + VD+V + K + LG L HH GFC++ + +IA
Sbjct: 96 NMHEASALLVGGTLTAVDAVLSGKVKHALNLGGGL-----HHGFRGKASGFCIYNDSSIA 150
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGTGKIDEVGR 181
+Y Q+ +GL RV ID D HHG+G +FYDDP++ +S H+ G Y PGTG ++E G+
Sbjct: 151 MKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHETGRYLFPGTGAVNERGQ 209
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G+G + N+PL + D + + V+ A FKPD+IL G DAH DPL L
Sbjct: 210 GNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHLCA 269
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
T Y + +++A + C R + GGY+
Sbjct: 270 TMNIYREIPKLAREIANEYCEGRWIAVGGGGYD 302
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 88/273 (32%), Positives = 139/273 (50%)
Query: 8 RGSEIIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP--TYATA 63
+G I + SP A+ ++IA +H Y++ +++A + ++ I + G G T
Sbjct: 36 KGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFP 95
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
+ S G + VD+V + K + LG L HH GFC++ + +IA
Sbjct: 96 NMHEASALLVGGTLTAVDAVLSGKVKHALNLGGGL-----HHGFRGKASGFCIYNDSSIA 150
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGTGKIDEVGR 181
+Y Q+ +GL RV ID D HHG+G +FYDDP++ +S H+ G Y PGTG ++E G+
Sbjct: 151 MKYIQKKYGL-RVLYIDTDAHHGDGVQWSFYDDPNVCTISLHETGRYLFPGTGAVNERGQ 209
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G+G + N+PL + D + + V+ A FKPD+IL G DAH DPL L
Sbjct: 210 GNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHLCA 269
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
T Y + +++A + C R + GGY+
Sbjct: 270 TMNIYREIPKLAREIANEYCEGRWIAVGGGGYD 302
>UNIPROTKB|I3L961 [details] [associations]
symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
Uniprot:I3L961
Length = 606
Score = 370 (135.3 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 90/218 (41%), Positives = 122/218 (55%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +TF + AAGA + LVD+V A R G AL+RPPGHH+ GFCVF +
Sbjct: 50 YFHPSTFHCARLAAGAALQLVDAVMAGVVRN----GLALVRPPGHHSQRAAANGFCVFNS 105
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS---YPGTG 174
VAIAA++AQ+ HGL R+ I+D+D+HHG GT F DDP + + S H + G Y
Sbjct: 106 VAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRES 165
Query: 175 KIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHE-VIVPCAQRFKPDLILVSAGYDAHV 232
D VGRG G G T+NLP G G+ F + V++P A F +L+LVSAG+D+ +
Sbjct: 166 DADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAI 225
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLE 270
D +Q T + A++ QL + L G R LE
Sbjct: 226 GDSEGQMQATPECF----AHLTQLLQVLAGGRVCAVLE 259
>UNIPROTKB|I3LKB5 [details] [associations]
symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
Uniprot:I3LKB5
Length = 621
Score = 370 (135.3 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 90/218 (41%), Positives = 122/218 (55%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +TF + AAGA + LVD+V A R G AL+RPPGHH+ GFCVF +
Sbjct: 64 YFHPSTFHCARLAAGAALQLVDAVMAGVVRN----GLALVRPPGHHSQRAAANGFCVFNS 119
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS---YPGTG 174
VAIAA++AQ+ HGL R+ I+D+D+HHG GT F DDP + + S H + G Y
Sbjct: 120 VAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRES 179
Query: 175 KIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHE-VIVPCAQRFKPDLILVSAGYDAHV 232
D VGRG G G T+NLP G G+ F + V++P A F +L+LVSAG+D+ +
Sbjct: 180 DADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAI 239
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLE 270
D +Q T + A++ QL + L G R LE
Sbjct: 240 GDSEGQMQATPECF----AHLTQLLQVLAGGRVCAVLE 273
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 99/275 (36%), Positives = 142/275 (51%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +I +VH + YV ++ +Q Y + T+ + AAGA I L+
Sbjct: 59 AEESEILAVHTKRYVDDVKSTETMTVEQQESFCTKYEDIYVNSATWHRAKLAAGASIDLM 118
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
SV A+K RP G A IRPPGHHA+P GFC+F NVAIAA+ A + +G K V I+D
Sbjct: 119 TSVMAAK-RP----GIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKAAIQ-NGQK-VLIVD 171
Query: 141 FDVHHGNGTNDAFYD--DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPG-GS 197
+DVH GNGT + + ++ +S H+ + + + G +T+NLPL G
Sbjct: 172 YDVHAGNGTQECVEQMGEGNVQLISIHRYENGHFWPNMPQTGIYHNYKNTINLPLNTIGL 231
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
D +F +I+P F+PDL+LVS+G+DA + DP S+Q T + A I+ L
Sbjct: 232 TDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGF---ATMIRMLI 288
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
G LEGGY L++L+ RA LGE
Sbjct: 289 DT--GIPVAALLEGGYFLDALAADSEWVLRALLGE 321
>DICTYBASE|DDB_G0280195 [details] [associations]
symbol:hdaC "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
Length = 1704
Score = 374 (136.7 bits), Expect = 6.2e-33, P = 6.2e-33
Identities = 98/278 (35%), Positives = 139/278 (50%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKG-----P-M 112
T+ + + + +L A+G+ A VDSV+ R F IRPPGHHA G P
Sbjct: 1171 TFVSHRSIKAALRASGSVCAAVDSVS----RSGYTRAFCAIRPPGHHAGRYGRTSDAPSQ 1226
Query: 113 GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ-DGS-- 169
G+C+ NVAI A+YA G R+ ++DFDVHHGNGT + D + F+S H D
Sbjct: 1227 GYCLINNVAIGAKYASLTAGYSRIAVVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRY 1286
Query: 170 -YPGTGK----IDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILV 224
YPGTG+ IDEV G +G+ LN+ L +G + I+P + +KP LI +
Sbjct: 1287 FYPGTGQDVGDIDEVS-GQFDGNILNIGLKRNTGSAVFLQQWMNKIIPRLEAYKPQLIFL 1345
Query: 225 SAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL---NSLSYS 281
SAG+D H DP L+ Y+++ IK +A C R + LEGGY + NSL
Sbjct: 1346 SAGFDGHKDDPTNGLKLNEEDYFVITKMIKTVAFKYCKGRIISVLEGGYGIEKTNSLQRC 1405
Query: 282 VADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIER 319
V +A + + + N I Y S + AI +
Sbjct: 1406 VNSHLKALIEDTDEEIHLAN--ISYGHFSETQETAIPK 1441
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 96/289 (33%), Positives = 137/289 (47%)
Query: 15 LKNFSPASVDD--IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++ F +D +A H + ++ + ++ + E S T T+ S
Sbjct: 43 VRQFDSKPIDKSLLALAHTQEHIDFVFDNAPNEGEENFTVGEDSVMNEKTLTSIMYS--- 99
Query: 73 AGAGIALVDSVAASKNRPDPPLG--FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AGA + VD V + LG F RPPGHHA MGFC F NVA+AA YA++
Sbjct: 100 AGAAVDAVDLVM------EGTLGAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYAKQK 153
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFY--------DDPDIFFLSTHQDGSYPGTGKIDEVGRG 182
+GLKRV I+DFDVHHGNGT D DD F S++Q YP E+
Sbjct: 154 YGLKRVAIVDFDVHHGNGTEDIITNHFNATPEDDKGYLFCSSYQYPLYPF-----EIQES 208
Query: 183 DGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
D +N PL + R +P +FKP+LIL+SAG+DAH+ D ++ + T
Sbjct: 209 DTP-PIINTPLAATTKGEQFREKLTAHWLPALHKFKPELILISAGFDAHIEDEMSHVSLT 267
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
Y + +K +A++ R V LEGGY ++L SV +G
Sbjct: 268 EADYRWITDELKIIAEEYGKGRIVSVLEGGYAPSALGRSVVAHVNGLIG 316
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 96/289 (33%), Positives = 137/289 (47%)
Query: 15 LKNFSPASVDD--IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++ F +D +A H + ++ + ++ + E S T T+ S
Sbjct: 43 VRQFDSKPIDKSLLALAHTQEHIDFVFDNAPNEGEENFTVGEDSVMNEKTLTSIMYS--- 99
Query: 73 AGAGIALVDSVAASKNRPDPPLG--FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AGA + VD V + LG F RPPGHHA MGFC F NVA+AA YA++
Sbjct: 100 AGAAVDAVDLVM------EGTLGAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYAKQK 153
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFY--------DDPDIFFLSTHQDGSYPGTGKIDEVGRG 182
+GLKRV I+DFDVHHGNGT D DD F S++Q YP E+
Sbjct: 154 YGLKRVAIVDFDVHHGNGTEDIITNHFNATPEDDKGYLFCSSYQYPLYPF-----EIQES 208
Query: 183 DGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
D +N PL + R +P +FKP+LIL+SAG+DAH+ D ++ + T
Sbjct: 209 DTP-PIINTPLAATTKGEQFREKLTAHWLPALHKFKPELILISAGFDAHIEDEMSHVSLT 267
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
Y + +K +A++ R V LEGGY ++L SV +G
Sbjct: 268 EADYRWITDELKIIAEEYGKGRIVSVLEGGYAPSALGRSVVAHVNGLIG 316
>UNIPROTKB|C9J8B8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
Length = 619
Score = 316 (116.3 bits), Expect = 9.4e-32, Sum P(2) = 9.4e-32
Identities = 77/201 (38%), Positives = 108/201 (53%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
AS +++ VH+ YVS L + ++ + + G Y +TF + AAGAG+ L
Sbjct: 55 ASEEELGLVHSPEYVS-LVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQL 113
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD+V + G AL+RPPGHH GFCVF NVAIAA +A++ HGL R+ ++
Sbjct: 114 VDAVLTGAVQN----GLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVV 169
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-P--GTGKIDEVGRGDGEGSTLNLPLP 194
D+DVHHG G F DDP + + S H + G + P D VGRG G G T+NLP
Sbjct: 170 DWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWN 229
Query: 195 G-GSGDTAMRTVFHEVIVPCA 214
G G+ F +++P A
Sbjct: 230 QVGMGNADYVAAFLHLLLPLA 250
Score = 62 (26.9 bits), Expect = 9.4e-32, Sum P(2) = 9.4e-32
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 270 EGGYNLNSLSYSVADSFRAFLGEPS 294
EGGY+L SL+ SV + + LG+P+
Sbjct: 252 EGGYHLESLAESVCMTVQTLLGDPA 276
Score = 59 (25.8 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 34/121 (28%), Positives = 53/121 (43%)
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
++ PLP +G + +++P A F+PDL+LV+ G + P A+L
Sbjct: 494 VSTPLPVMTG--GFLSCILGLVLPLAYGFQPDLVLVALGPGHGLQGPHAAL--------- 542
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYN---LNSLSYSVADSFRAFLGEPSKASEFDNPAIL 305
LAA ++ LA G R + LE L+ + LG S AS D A++
Sbjct: 543 LAAMLRGLA----GGRVLALLEENSTPQLAGILARVLNGEAPPSLGPSSVASPEDVQALM 598
Query: 306 Y 306
Y
Sbjct: 599 Y 599
>UNIPROTKB|Q4K3I0 [details] [associations]
symbol:aphA_3 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
Uniprot:Q4K3I0
Length = 343
Score = 311 (114.5 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 85/246 (34%), Positives = 116/246 (47%)
Query: 47 QQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHA 106
Q G +G P TA T+Q + +AA +AL + A +N FAL RPPGHHA
Sbjct: 108 QLGYYSFDGGAPI--TAGTWQAAYSAAQ--VALT-AQAHIQNGAHS--AFALCRPPGHHA 160
Query: 107 IPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH- 165
G+C N AIAA+ A G ++V I+D D HHGNGT FY+ D+ F S H
Sbjct: 161 AGDLMGGYCYLNNAAIAAQ-AFLDQGHRKVAILDVDYHHGNGTQSIFYERSDVLFTSIHG 219
Query: 166 -QDGSYPG-TGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLIL 223
+ +P G DE G G GEG N PL GSG A + QR+ D+I+
Sbjct: 220 HPEAEFPFFLGYADECGEGAGEGFNFNYPLAAGSGWDAWSAALEQACNEI-QRYDADIIV 278
Query: 224 VSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
VS G D DP++ + + Y + I L K +F +EGGY + + +
Sbjct: 279 VSLGVDTFKDDPISQFKLDSPDYLAMGKRIAALGKPT-----LFVMEGGYAVEEIGINAV 333
Query: 284 DSFRAF 289
+ F
Sbjct: 334 NVLEGF 339
Score = 47 (21.6 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGI 50
++ I +H+RAY+ + A R + QGI
Sbjct: 56 LEPIERIHSRAYLDFFKGAWARWAAQGI 83
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 311 (114.5 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 83/239 (34%), Positives = 119/239 (49%)
Query: 49 GIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIP 108
G ++ P TATT+ A IAL ++A D FAL RPPGHHA
Sbjct: 110 GFFAMDAGSPI--TATTWDA--VRTSADIALT-ALALIDEGQDS--AFALCRPPGHHAAR 162
Query: 109 KGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDG 168
+ G+C N AIAA++A G +RV ++D D HHGNGT + FYD D+ F+S H D
Sbjct: 163 EYMGGYCYLNNAAIAAQHAI-TRGARRVAVLDVDFHHGNGTQNIFYDRGDVLFVSLHGDP 221
Query: 169 --SYPG-TGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVS 225
SYP +G E G G GEG LNLPLP + R E+ + F P+L++VS
Sbjct: 222 AVSYPYFSGHASERGSGAGEGCNLNLPLPKNTSWQHYRQAL-ELACKQLRAFAPELLVVS 280
Query: 226 AGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVAD 284
G D DP++ + + + I + G+ +F +EGGY ++ + + +
Sbjct: 281 LGVDTFKDDPISHFLLESEDFLGMGQIIATV-----GTPTLFVMEGGYMVDEIGINAVN 334
Score = 38 (18.4 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQG 49
EII + F A + H+ YVS LE A + G
Sbjct: 46 EIIGPRRFDRACY---VAAHSERYVSFLENAWSEWTATG 81
>UNIPROTKB|Q4K950 [details] [associations]
symbol:aphA_2 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
Uniprot:Q4K950
Length = 341
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 90/256 (35%), Positives = 130/256 (50%)
Query: 46 SQQGIILIEGSGP----TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRP 101
+Q L +GS P T+ A +S A AGA AL+D P +AL RP
Sbjct: 105 AQAACYLADGSCPVGESTWRAAYWSAQS-AVAGAQ-ALLDG---------EPAAYALCRP 153
Query: 102 PGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFF 161
PGHHA + GFC N AIAA+ + + RV ++D D+HHG G + FY+ D+ +
Sbjct: 154 PGHHARSEAAGGFCYLNNAAIAAQVLRDKYA--RVAVLDTDMHHGQGIQEIFYERADVLY 211
Query: 162 LSTHQDGS--YPGT-GKIDEVGRGDGEGSTLNLPLPGGS--GDTAMRTVFHEVIVPCAQR 216
+S H D + YPG G +E G G GEG LNLP+ G+ GD R E + +
Sbjct: 212 VSVHGDPTNFYPGVAGFAEERGAGAGEGYNLNLPMAHGASEGDFLARL---EQALEAVKA 268
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F +++++S G+D + LDP + + T + +L I+ L G C+ EGGY+L
Sbjct: 269 FDAEVLVLSLGFDIYELDPQSKVAVTRDGFAILGQRIRSL-----GLPCLIVQEGGYHLE 323
Query: 277 SLSYSVADSFRAFLGE 292
SL D+ RAF +
Sbjct: 324 SLE----DNARAFFAD 335
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 85/281 (30%), Positives = 137/281 (48%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSG---LEKAMDRASQQGIILIEGSG 57
M++ + EII ++ A++ ++ VH AYV L K + + L
Sbjct: 36 MKIAEVLKEEEIIPPRS---ATLKELYLVHDPAYVEAVMNLSKNPENVNGSRFGLGSEDN 92
Query: 58 PTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCV 116
P ++ E+ A G AL + + D A G HHA+ GFC+
Sbjct: 93 PVFSG---MHEAAALVAGGSAL-GAELIYEGEADHVFNIA----GGLHHALRDAASGFCI 144
Query: 117 FGNVAIA-ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGT 173
+ ++A+A A++ ++ GLK V +D D HHG+G FY DP + +S H+ G Y PGT
Sbjct: 145 YNDLAVAIAKFREK--GLK-VAYVDLDAHHGDGVQWLFYSDPGVLTISIHETGRYLFPGT 201
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
G I E+G G G+ +N+PL + D + E++ ++FKPD+++ G D+H
Sbjct: 202 GSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRF 261
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
DPL L TT + A + +LA ++CG R + GGY+
Sbjct: 262 DPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGGYD 302
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 85/281 (30%), Positives = 137/281 (48%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSG---LEKAMDRASQQGIILIEGSG 57
M++ + EII ++ A++ ++ VH AYV L K + + L
Sbjct: 36 MKIAEVLKEEEIIPPRS---ATLKELYLVHDPAYVEAVMNLSKNPENVNGSRFGLGSEDN 92
Query: 58 PTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCV 116
P ++ E+ A G AL + + D A G HHA+ GFC+
Sbjct: 93 PVFSG---MHEAAALVAGGSAL-GAELIYEGEADHVFNIA----GGLHHALRDAASGFCI 144
Query: 117 FGNVAIA-ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGT 173
+ ++A+A A++ ++ GLK V +D D HHG+G FY DP + +S H+ G Y PGT
Sbjct: 145 YNDLAVAIAKFREK--GLK-VAYVDLDAHHGDGVQWLFYSDPGVLTISIHETGRYLFPGT 201
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
G I E+G G G+ +N+PL + D + E++ ++FKPD+++ G D+H
Sbjct: 202 GSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRF 261
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
DPL L TT + A + +LA ++CG R + GGY+
Sbjct: 262 DPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGGYD 302
>DICTYBASE|DDB_G0279267 [details] [associations]
symbol:hdaD "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
Length = 1489
Score = 222 (83.2 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 48/126 (38%), Positives = 70/126 (55%)
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHA----IPKGP- 111
G T+ + + + +AGA +D+V + + F RPPGHHA + G
Sbjct: 1188 GDTFVSKLSLHAAKRSAGATCQAIDNVM----KGNVTSAFVAARPPGHHAGRDGLTSGTS 1243
Query: 112 -MGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDG 168
GFC+ +V I A+YAQ + L ++ IIDFDVHHGNGT + +D +FLS H ++G
Sbjct: 1244 SQGFCLLNHVCIGAKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG 1303
Query: 169 SYPGTG 174
YPG+G
Sbjct: 1304 FYPGSG 1309
Score = 164 (62.8 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+G+ +N+PL S ++ F +I+ ++P+LIL+S G+DAH+ D LASL
Sbjct: 1382 KGNIVNIPLDPKSSASSFLKAF-SIIIDKLNDYQPELILISCGFDAHMEDHLASLCLLEE 1440
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSL 278
Y + +++++A C R V LEGGYN+N+L
Sbjct: 1441 NYVEITRSLRRVADRWCKGRLVSILEGGYNINAL 1474
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 52/105 (49%), Positives = 71/105 (67%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
GFA++RPPGHHA MGFC F +VAI A+Y + + ++ I+D DVHHGNGT AFY
Sbjct: 4 GFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFY 63
Query: 155 DDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGSTLNLPLPGG 196
DP I ++S H+ +G++ PG+G +EVG G GEG +N+ GG
Sbjct: 64 ADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGG 108
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 67/200 (33%), Positives = 104/200 (52%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L + Y ++ + A+G+ + LV
Sbjct: 81 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLV 140
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F +VA+AARYAQ+ H ++RV I+D
Sbjct: 141 DAVLGAEIRN----GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 196
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H + G + P G G G+G T+N+P
Sbjct: 197 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 256
Query: 196 -GSGDTAMRTVFHEVIVPCA 214
G D F V++P A
Sbjct: 257 VGMRDADYIAAFLHVLLPVA 276
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 70/194 (36%), Positives = 103/194 (53%)
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGSTLNLPLPGG-- 196
DVHHGNGT FY DP + ++S H+ DG++ PG+G +DEVG G GEG +N+ GG
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLD 198
Query: 197 --SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA---A 251
GD F V++P A+ F PDL+LVSAG+DA P A L G Y++ A
Sbjct: 199 PPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHP-APL----GGYHVSAKCFG 253
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSA 311
+ Q +L G V LEGG++L ++ + A LG ++ ++P+
Sbjct: 254 YMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLG--NRVDPLSEEG-WKQKPNL 310
Query: 312 KVKQAIERVKHIHS 325
+++E V +HS
Sbjct: 311 NAIRSLEAVIRVHS 324
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 291 (107.5 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 58/128 (45%), Positives = 81/128 (63%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I L VA+ + + GFA++RPPGHHA MGFC F +VAI A+Y +
Sbjct: 754 AVGCVIELASRVASGELKN----GFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQL 809
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PGTGKIDEVGRGDGEGST 188
+ ++ I+D DVHHGNGT AFY DP+I ++S H+ +G++ PG+G +EVG G GEG
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYN 869
Query: 189 LNLPLPGG 196
+N+ GG
Sbjct: 870 INIAWTGG 877
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 88/263 (33%), Positives = 119/263 (45%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A + I ++H A G K+ Q G + + P T++ + +A + I
Sbjct: 83 AGAEVIPNIHPGARTDGYPKSA--VGQAGYHQADTACPI--AEGTWEAAYWSAQSAITGA 138
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D + + + L RPPGHHA GFC N AIAA RA GL R I+D
Sbjct: 139 DLIIQGERS-----AYVLSRPPGHHAFGDLAGGFCFLNNSAIAAERL-RAAGL-RPAILD 191
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGT-GKIDEVGRGDGEGSTLNLPLPGGS 197
DVHHGNGT FY+ D+ +S H D + YP G E G G G G LNLPL G+
Sbjct: 192 IDVHHGNGTQGIFYERDDVLTVSIHADPARFYPFFWGHAQERGAGRGLGYNLNLPLARGT 251
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
GD + A F +++V+ G DA + DP L T + + A
Sbjct: 252 GDDDYLDTLSVALRQVAS-FGSRVLVVALGLDASIDDPFQGLAITQDGFARIGAA----- 305
Query: 258 KDLCGSRC-VFFL-EGGYNLNSL 278
L G+R V F+ EGGY +SL
Sbjct: 306 --LAGTRVPVLFVQEGGYLCDSL 326
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 55/146 (37%), Positives = 85/146 (58%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYAT-ATTFQESLAAAGAGIALV 80
S ++I VH+ ++ K+ +++ + I G+ ++ T+ + A GA + LV
Sbjct: 58 SEEEILLVHSSEHLEAA-KSTQTMNEEELKRISGNYDSFFFHPNTYHCARLAVGAALQLV 116
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV + K G AL+RPPGHH+ GFC+F NVAIAA YA+ +GL+R+ I+D
Sbjct: 117 DSVMSGKVCN----GMALVRPPGHHSQRNAANGFCLFNNVAIAAEYAKLKYGLQRILIVD 172
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ 166
+DVHHG GT F +DP + + S H+
Sbjct: 173 WDVHHGQGTQYIFEEDPSVLYFSWHR 198
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 251 (93.4 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 61/174 (35%), Positives = 81/174 (46%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GF + +A GL RV +D D HHG+G +AFYD + +S
Sbjct: 134 HHAHRAKASGFSYLNDAVVAINLLLEK-GL-RVAYLDIDAHHGDGVQEAFYDTDRVLTIS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G Y PGTG E G G G G ++N+PL + D F EV P + PD+
Sbjct: 192 IHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMKAFDEVAFPLLAAYNPDV 251
Query: 222 ILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
++ G D DPL L+ TT +Y + +K L G V GGYNL
Sbjct: 252 LVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKAL-----GIPWVAVGGGGYNL 300
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 251 (93.4 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 61/174 (35%), Positives = 81/174 (46%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GF + +A GL RV +D D HHG+G +AFYD + +S
Sbjct: 134 HHAHRAKASGFSYLNDAVVAINLLLEK-GL-RVAYLDIDAHHGDGVQEAFYDTDRVLTIS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G Y PGTG E G G G G ++N+PL + D F EV P + PD+
Sbjct: 192 IHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMKAFDEVAFPLLAAYNPDV 251
Query: 222 ILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
++ G D DPL L+ TT +Y + +K L G V GGYNL
Sbjct: 252 LVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKAL-----GIPWVAVGGGGYNL 300
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 241 (89.9 bits), Expect = 8.8e-20, P = 8.8e-20
Identities = 60/182 (32%), Positives = 88/182 (48%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H KRV ID DVHHG+G +AFY + +S
Sbjct: 139 HHAKKSEASGFCYSNDIVLAILELLKHH--KRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 196
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + +VG G G+ LN+PL G D +F ++ RF+P+ +
Sbjct: 197 FHKHGEYFPGTGDLKDVGAGSGKYYALNVPLRDGVDDVTYERIFRTIMGEVMARFQPEAV 256
Query: 223 LVSAGYDAHVLDPLASLQFTTGTY-----YMLAANIKQLAKDLCGSRCVFFLEGGYNLNS 277
++ G D+ D L TT + YM + N+ L L G GGY + +
Sbjct: 257 VLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKSFNVPLL---LVGG-------GGYTIRN 306
Query: 278 LS 279
+S
Sbjct: 307 VS 308
>UNIPROTKB|E7EPS2 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00465375
ProteinModelPortal:E7EPS2 SMR:E7EPS2 Ensembl:ENST00000426196
ArrayExpress:E7EPS2 Bgee:E7EPS2 Uniprot:E7EPS2
Length = 269
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 50/137 (36%), Positives = 78/137 (56%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L + Y ++ + A+G+ + LV
Sbjct: 136 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLV 195
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F +VA+AARYAQ+ H ++RV I+D
Sbjct: 196 DAVLGAEIRN----GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 251
Query: 141 FDVHHGNGTNDAFYDDP 157
+DVHHG GT F DP
Sbjct: 252 WDVHHGQGTQFTFDQDP 268
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 237 (88.5 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 76/263 (28%), Positives = 115/263 (43%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++AS H AY+ L+K + +E G G AT F + A GA I
Sbjct: 62 ASMEEMASFHTDAYLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGIFDYAAAVGGATIT 121
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAA-RYAQRAHGLKRV 136
+ K + A+ P G HHA GFC + + R Q+ R+
Sbjct: 122 AAQCLLDGKCK------VAINWPGGWHHAKKDEASGFCYLNDAVLGILRLRQK---FDRI 172
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLP 194
ID D+HHG+G DAF + +S H+ G +PGTG + ++G G G ++N+P+
Sbjct: 173 LYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDIGLGKGRYYSVNVPIQ 232
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT-GTYYMLAANI 253
G D + V+ F P+ +++ G D DP+ S T G L +
Sbjct: 233 DGIQDEKYYQICETVLKEVYAAFNPEAVVLQLGADTIAGDPMCSFNMTPEGVGKCLKYVL 292
Query: 254 K-QLAKDLCGSRCVFFLEGGYNL 275
+ QLA + G GGYNL
Sbjct: 293 QWQLATLILGG-------GGYNL 308
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 236 (88.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 57/177 (32%), Positives = 87/177 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA + GFC ++A+AA + H +RV ID DVHHG+G + FY + S
Sbjct: 137 HHAKKREASGFCYVNDIALAALELLKYH--QRVLYIDIDVHHGDGVEEFFYTTDRVMTCS 194
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG I + G G G+ +N+PL G D + +VF VI Q F+P+ +
Sbjct: 195 FHKFGEYFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISHIMQWFRPEAV 254
Query: 223 LVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLS 279
++ G D+ D L + + M +K + CV GGY + +++
Sbjct: 255 ILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMI---CVG--GGGYTVRNVA 306
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 231 (86.4 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 82/303 (27%), Positives = 132/303 (43%)
Query: 26 IASVHARAYVSGLEKA-MDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGIALVDS 82
+ + H Y++ L++A ++A + G G P A ++ AAG + +
Sbjct: 53 LRAFHTPDYIAALQQAEAEQAVSEETRARHGLGTLPNPVFAEMYRRPATAAGGSLLAAEL 112
Query: 83 VAASKNRPDPPLGFALIRPPG--HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
VA G + P G HH GFC + +A QR G RV +D
Sbjct: 113 VAR---------GHRVFNPGGGTHHGFADRAGGFCYLNDPVLAILALQRL-GCARVAYVD 162
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
D HH +G AF + +S H+ +P TG +++ D G+ LNLP+ D+
Sbjct: 163 IDAHHCDGVASAFQGSQTVRMISIHEARRWPFTGALED----DAGGAALNLPVARDLNDS 218
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A + +I+P F+PD +++ G DA DPL+ L + + ++ LA L
Sbjct: 219 AYALILDRLILPAVAGFRPDAVVLQCGADAVAEDPLSRLALSNCAH---RDTVRALAA-L 274
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQ-AIER 319
C R + GGYN +SVA RA+ G + S + P L E A ++ + +R
Sbjct: 275 C-PRLLVLGGGGYN----PWSVA---RAWTGVWATLSGAEIPDRLPPEAEAVLRALSWQR 326
Query: 320 VKH 322
+H
Sbjct: 327 QRH 329
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 231 (86.4 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 75/262 (28%), Positives = 115/262 (43%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++A+ H AY+ L+K IE G G AT F + A GA
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGA--- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R +R+
Sbjct: 119 ---TITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FERIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT-TGTYYMLAANIK 254
G D + V+ Q F P +++ G D DP+ S T G L ++
Sbjct: 234 GIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 293
Query: 255 -QLAKDLCGSRCVFFLEGGYNL 275
QLA + G GGYNL
Sbjct: 294 WQLATLILGG-------GGYNL 308
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 233 (87.1 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 67/236 (28%), Positives = 108/236 (45%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYAT 62
L S + +I++L A+ D++ H+ YV+ L K + + L G+ +
Sbjct: 58 LVSSYGLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPENANK---LPRGTLENFNI 114
Query: 63 ATT---FQE--SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCV 116
FQ G +L + N+ D + ++ G HHA P GFC
Sbjct: 115 GDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWS----GGLHHAKKNSPSGFCY 170
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ-DGSY-PGTG 174
++ ++ R H R+ ID D+HHG+G +AFY +F LS H+ +G + PGTG
Sbjct: 171 VNDIVLSILNLLRYH--PRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTG 228
Query: 175 KIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
+ E+G G+ LN+PL G D + +F ++ P FKP LI+ G D+
Sbjct: 229 DLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADS 284
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 229 (85.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 76/262 (29%), Positives = 116/262 (44%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++A+ H AY+ L+K + IE G G AT F + AA G G
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYA-AAIGGG-- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R R+
Sbjct: 119 ---TITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FDRIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQD 233
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT-TGTYYMLAANIK 254
G D + V+ Q F P +++ G D DP+ S T G L ++
Sbjct: 234 GIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQ 293
Query: 255 -QLAKDLCGSRCVFFLEGGYNL 275
QLA + G GGYNL
Sbjct: 294 WQLATLILGG-------GGYNL 308
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 229 (85.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 76/262 (29%), Positives = 116/262 (44%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++A+ H AY+ L+K + IE G G AT F + AA G G
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYA-AAIGGG-- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R R+
Sbjct: 119 ---TITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FDRIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQD 233
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT-TGTYYMLAANIK 254
G D + V+ Q F P +++ G D DP+ S T G L ++
Sbjct: 234 GIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQ 293
Query: 255 -QLAKDLCGSRCVFFLEGGYNL 275
QLA + G GGYNL
Sbjct: 294 WQLATLILGG-------GGYNL 308
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 229 (85.7 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 66/223 (29%), Positives = 103/223 (46%)
Query: 15 LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIE----GSG-PTYATATTFQES 69
LK F PA D+ HA YVS L Q I ++ G P + +F ++
Sbjct: 62 LKPF-PARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQT 120
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQ 128
A G SV + D + +A G HHA GFC ++ +A
Sbjct: 121 YAGGSVG----GSVKLNHGLCDIAINWA----GGLHHAKKCEASGFCYVNDIVLAILELL 172
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGS 187
+ H +RV +D D+HHG+G +AFY + +S H+ G Y PGTG I ++G G G+
Sbjct: 173 KQH--ERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYY 230
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
+LN+PL G D + +F ++ + F+P +++ G D+
Sbjct: 231 SLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADS 273
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 228 (85.3 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 48/135 (35%), Positives = 73/135 (54%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA P GFC ++ ++ R H RV ID D+HHG+G +AFY+ + +S
Sbjct: 167 HHAKKFEPSGFCYVNDIVLSIINLLRVH--PRVMYIDIDLHHGDGVQEAFYNTDRVMTVS 224
Query: 164 THQ-DGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ +G + PGTG +DEVG G G+ +N+PL G D + +F ++ P +F+P
Sbjct: 225 FHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKSIMEPLITKFQPTC 284
Query: 222 ILVSAGYDAHVLDPL 236
I+ G D+ D L
Sbjct: 285 IVQQCGADSLGYDRL 299
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 228 (85.3 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 48/135 (35%), Positives = 73/135 (54%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA P GFC ++ ++ R H RV ID D+HHG+G +AFY+ + +S
Sbjct: 167 HHAKKFEPSGFCYVNDIVLSIINLLRVH--PRVMYIDIDLHHGDGVQEAFYNTDRVMTVS 224
Query: 164 THQ-DGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ +G + PGTG +DEVG G G+ +N+PL G D + +F ++ P +F+P
Sbjct: 225 FHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKSIMEPLITKFQPTC 284
Query: 222 ILVSAGYDAHVLDPL 236
I+ G D+ D L
Sbjct: 285 IVQQCGADSLGYDRL 299
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 226 (84.6 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 53/179 (29%), Positives = 86/179 (48%)
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAA 124
F+ +AG + +V +K + D + +A G HHA GFC ++ +A
Sbjct: 15 FEFCQLSAGGSVGPASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAI 70
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGD 183
+ H +RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G
Sbjct: 71 LELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGK 128
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G+ +N PL G D + +F V+ + F+P +++ G D+ D L T
Sbjct: 129 GKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLT 187
>GENEDB_PFALCIPARUM|PF14_0690 [details] [associations]
symbol:PF14_0690 "histone deactylase, putative"
species:5833 "Plasmodium falciparum" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0006325 "chromatin
organization" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR002110
SMART:SM00248 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006355
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:AE014187 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
RefSeq:XP_001348864.2 ProteinModelPortal:Q8IKB6 IntAct:Q8IKB6
MINT:MINT-1556967 PRIDE:Q8IKB6 EnsemblProtists:PF14_0690:mRNA
GeneID:812272 KEGG:pfa:PF14_0690 EuPathDB:PlasmoDB:PF3D7_1472200
Uniprot:Q8IKB6
Length = 2251
Score = 163 (62.4 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 52/156 (33%), Positives = 77/156 (49%)
Query: 132 GLKRVFIIDF-DVHHGNGTNDAFYDDPDIFFLSTHQ-DGS-YPGTGKIDEVGRGDGEGST 188
GLK++ + ++ D++ G D D +IFF S H DG YPGTG D V + E
Sbjct: 1752 GLKKLTVNEYIDIYSWKGWKDN-NDKKNIFFSSVHAYDGYFYPGTG-YDTV---ELEPYI 1806
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS--LQFTTGTY 246
+N+ L +FH I+ FKP+L+ +SAG+D H LD + + ++ T TY
Sbjct: 1807 INVTLKKNMTSLEFLNIFHSKILIHLYYFKPNLLFLSAGFDGHQLDYVNNGFVKKNTSTY 1866
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ L + L L + LEGGYN + SV
Sbjct: 1867 FYLTKLVLSLQNKL-NFPIISVLEGGYNTSKDMASV 1901
Score = 137 (53.3 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 96 FALIRPPGHHA--------------IPKGPMGFCVFGNVAIAARYAQRAHG-LKRVFIID 140
F ++RPPGHH + G GFC+ NVA+ YA+ + +R+ IID
Sbjct: 1676 FCVVRPPGHHLGTFGAAQFNLTDEDVAAGSQGFCILNNVAVGLAYAKYTYKKFERIAIID 1735
Query: 141 FDVHHGNGT 149
FDVHHGNGT
Sbjct: 1736 FDVHHGNGT 1744
Score = 38 (18.4 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 50 IILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASK 87
++L++ T+ +F +L+A+G + VD V K
Sbjct: 1573 LLLVDND--TFVNKYSFNCALSASGVVLKAVDYVHKQK 1608
>UNIPROTKB|Q8IKB6 [details] [associations]
symbol:PF14_0690 "Histone deacetylase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0004407 "histone deacetylase
activity" evidence=ISS] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] InterPro:IPR002110 SMART:SM00248 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0006355 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AE014187
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
RefSeq:XP_001348864.2 ProteinModelPortal:Q8IKB6 IntAct:Q8IKB6
MINT:MINT-1556967 PRIDE:Q8IKB6 EnsemblProtists:PF14_0690:mRNA
GeneID:812272 KEGG:pfa:PF14_0690 EuPathDB:PlasmoDB:PF3D7_1472200
Uniprot:Q8IKB6
Length = 2251
Score = 163 (62.4 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 52/156 (33%), Positives = 77/156 (49%)
Query: 132 GLKRVFIIDF-DVHHGNGTNDAFYDDPDIFFLSTHQ-DGS-YPGTGKIDEVGRGDGEGST 188
GLK++ + ++ D++ G D D +IFF S H DG YPGTG D V + E
Sbjct: 1752 GLKKLTVNEYIDIYSWKGWKDN-NDKKNIFFSSVHAYDGYFYPGTG-YDTV---ELEPYI 1806
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS--LQFTTGTY 246
+N+ L +FH I+ FKP+L+ +SAG+D H LD + + ++ T TY
Sbjct: 1807 INVTLKKNMTSLEFLNIFHSKILIHLYYFKPNLLFLSAGFDGHQLDYVNNGFVKKNTSTY 1866
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ L + L L + LEGGYN + SV
Sbjct: 1867 FYLTKLVLSLQNKL-NFPIISVLEGGYNTSKDMASV 1901
Score = 137 (53.3 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 96 FALIRPPGHHA--------------IPKGPMGFCVFGNVAIAARYAQRAHG-LKRVFIID 140
F ++RPPGHH + G GFC+ NVA+ YA+ + +R+ IID
Sbjct: 1676 FCVVRPPGHHLGTFGAAQFNLTDEDVAAGSQGFCILNNVAVGLAYAKYTYKKFERIAIID 1735
Query: 141 FDVHHGNGT 149
FDVHHGNGT
Sbjct: 1736 FDVHHGNGT 1744
Score = 38 (18.4 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 50 IILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASK 87
++L++ T+ +F +L+A+G + VD V K
Sbjct: 1573 LLLVDND--TFVNKYSFNCALSASGVVLKAVDYVHKQK 1608
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 226 (84.6 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 66/243 (27%), Positives = 117/243 (48%)
Query: 7 FRGSEIIELKNFSPASVDDIASVHARAYVSGLEKA----MDRASQQGIILIEGSG-PTYA 61
+R EI + F PAS +D+ H+ Y++ L+ A + ++Q + G P +
Sbjct: 52 YRNLEIF--RPF-PASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFD 108
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNV 120
F + L++ G+ L + +K + D + + G HHA GFC ++
Sbjct: 109 GLYEFCQ-LSSGGS---LAAATKLNKQKVDIAINWM----GGLHHAKKSEASGFCYTNDI 160
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEV 179
+ + H KRV +D DVHHG+G +AFY + +S H+ G + PGTG + ++
Sbjct: 161 VLGILELLKYH--KRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGDLKDI 218
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G G G+ ++N+PL G D + +++F ++ +RF P +++ G D+ D L
Sbjct: 219 GAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPF 278
Query: 240 QFT 242
T
Sbjct: 279 NLT 281
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 226 (84.6 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 66/243 (27%), Positives = 117/243 (48%)
Query: 7 FRGSEIIELKNFSPASVDDIASVHARAYVSGLEKA----MDRASQQGIILIEGSG-PTYA 61
+R EI + F PAS +D+ H+ Y++ L+ A + ++Q + G P +
Sbjct: 52 YRNLEIF--RPF-PASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFD 108
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNV 120
F + L++ G+ L + +K + D + + G HHA GFC ++
Sbjct: 109 GLYEFCQ-LSSGGS---LAAATKLNKQKVDIAINWM----GGLHHAKKSEASGFCYTNDI 160
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEV 179
+ + H KRV +D DVHHG+G +AFY + +S H+ G + PGTG + ++
Sbjct: 161 VLGILELLKYH--KRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGDLKDI 218
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G G G+ ++N+PL G D + +++F ++ +RF P +++ G D+ D L
Sbjct: 219 GAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPF 278
Query: 240 QFT 242
T
Sbjct: 279 NLT 281
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 226 (84.6 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 53/179 (29%), Positives = 86/179 (48%)
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAA 124
F+ +AG + +V +K + D + +A G HHA GFC ++ +A
Sbjct: 112 FEFCQLSAGGSVGPASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAI 167
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGD 183
+ H +RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G
Sbjct: 168 LELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGK 225
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G+ +N PL G D + +F V+ + F+P +++ G D+ D L T
Sbjct: 226 GKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLT 284
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 228 (85.3 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKA----MDR-ASQQGIILIEGSGPTYATATTFQ 67
+E+ PAS ++ H Y+ L K MD A +Q + P + F
Sbjct: 68 MEIYRAKPASKFEMTQFHTDEYIDFLSKVTPDNMDAFAKEQSKYNVGDDCPVFDGLFEF- 126
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARY 126
AG ++ + ++N+ D + +A G HHA GFC ++ +
Sbjct: 127 ---CGISAGGSMEGAARLNRNKCDIAVNWA----GGLHHAKKSEASGFCYVNDIVLGILE 179
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGE 185
R +RV +D DVHHG+G +AFY + +S H+ G Y PGTG++ ++G G G+
Sbjct: 180 LLRFK--QRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGQGK 237
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
+N PL G D + +++F VI + ++P+ +++ G D+
Sbjct: 238 YYAVNFPLRDGIDDVSYKSIFEPVIKSVMEWYRPEAVVLQCGGDS 282
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 223 (83.6 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 73/262 (27%), Positives = 113/262 (43%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++A+ H AY+ L+K +E G G AT F + A GA
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSVEYGLGYDCPATEGIFDYAAAVGGA--- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R R+
Sbjct: 119 ---TITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FDRIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT-TGTYYMLAANIK 254
G D + V+ F P +++ G D DP+ S T G L ++
Sbjct: 234 GIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 293
Query: 255 -QLAKDLCGSRCVFFLEGGYNL 275
QLA + G GGYNL
Sbjct: 294 WQLATLILGGET-----GGYNL 310
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 225 (84.3 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 53/170 (31%), Positives = 84/170 (49%)
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
AG ++ +V +K + D + +A G HHA GFC ++ +A + H
Sbjct: 114 AGGSVASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 167
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLP 192
+RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N P
Sbjct: 168 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYP 227
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
L G D + +F VI + F+P +++ G D+ D L T
Sbjct: 228 LRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLT 277
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 221 (82.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 74/262 (28%), Positives = 114/262 (43%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++AS H AY+ L+K + IE G G AT F + A GA
Sbjct: 62 ASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSIEYGLGYDCPATEGIFDYAAAVGGA--- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R R+
Sbjct: 119 ---TITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FDRIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT-TGTYYMLAANIK 254
G D + V+ F P +++ G D DP+ S T G L ++
Sbjct: 234 GIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 293
Query: 255 -QLAKDLCGSRCVFFLEGGYNL 275
+LA + G GGYNL
Sbjct: 294 WELATLILGG-------GGYNL 308
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 213 (80.0 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 48/141 (34%), Positives = 70/141 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H RV ID DVHHG+G +AFY + +S
Sbjct: 143 HHARKDEASGFCYVNDIVLAILELLKFHA--RVLYIDIDVHHGDGVQEAFYLTDRVMTVS 200
Query: 164 THQDGS--YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G +PGTG IDE+G G+ ++N+PL G D +F VI ++P +
Sbjct: 201 FHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVIQGVMDYYRPSV 260
Query: 222 ILVSAGYDAHVLDPLASLQFT 242
I++ G D+ D L T
Sbjct: 261 IVLQCGADSLRFDRLGCFNLT 281
Score = 44 (20.5 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 20 PASVDDIASVHARAYVSGLEK 40
PA +D+ H+ YV LE+
Sbjct: 62 PADAEDMLKFHSEDYVDFLER 82
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 221 (82.9 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 67/274 (24%), Positives = 120/274 (43%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKA----MDRASQQGIILIEGSG-PTYATATTFQ 67
+E+ PA+ ++ H Y+ L + ++ ++ + G P +
Sbjct: 61 MEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVF---DGLY 117
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARY 126
E + +G G ++ + ++ + D + +A G HHA GFC ++ +
Sbjct: 118 EYCSISGGG-SMEGAARLNRGKCDVAVNYA----GGLHHAKKSEASGFCYLNDIVLGIIE 172
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGE 185
R H RV ID DVHHG+G +AFY + S H+ G + PGTG++ ++G G G+
Sbjct: 173 LLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDIGVGAGK 230
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
+N+PL G D R+VF VI + ++P +++ G D+ D L +
Sbjct: 231 NYAVNVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEG 290
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLS 279
+ AN K G + GGY + +++
Sbjct: 291 H----ANCVNYVKSF-GIPMMVVGGGGYTMRNVA 319
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 220 (82.5 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 73/262 (27%), Positives = 113/262 (43%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++A+ H AY+ L+K +E G G AT F + A GA
Sbjct: 100 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSVEYGLGYDCPATEGIFDYAAAVGGA--- 156
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R R+
Sbjct: 157 ---TITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FDRIL 211
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 212 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 271
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT-TGTYYMLAANIK 254
G D + V+ F P +++ G D DP+ S T G L ++
Sbjct: 272 GIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 331
Query: 255 -QLAKDLCGSRCVFFLEGGYNL 275
QLA + G GGYNL
Sbjct: 332 WQLATLILGG-------GGYNL 346
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 222 (83.2 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 46/140 (32%), Positives = 71/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ + + H +RV ID DVHHG+G +AFY + +S
Sbjct: 138 HHAKKSEASGFCYVNDIVLGILELLKYH--QRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 195
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N+PL G D A ++F +I + F+P +
Sbjct: 196 FHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAV 255
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 256 VLQCGADSLTGDRLGCFNLT 275
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 218 (81.8 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 65/225 (28%), Positives = 100/225 (44%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGL-----EKAMDRASQQGIILIEGSGPTYATATTFQ 67
+E+ S A DI H+ YV L E D ++ + + F
Sbjct: 61 LEISRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFD 120
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARY 126
A+AG I A NR D + A+ G HHA GFC ++ +
Sbjct: 121 FCRASAGGSIG----AAVKLNRQDADI--AINWGGGLHHAKKSEASGFCYVNDIVLGILE 174
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGE 185
+ KRV ID DVHHG+G +AFY + +S H+ G + PGTG I +VG G+
Sbjct: 175 LLKM--FKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGK 232
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
LN+PL G D + R++F +I + ++P+ +++ G D+
Sbjct: 233 YYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADS 277
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 218 (81.8 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
G ++ +V +K + D + +A G HHA GFC ++ +A + H +
Sbjct: 115 GGSVASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH--Q 168
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPL 193
RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N PL
Sbjct: 169 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPL 228
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G D + +F V+ + F+P +++ G D+ D L T
Sbjct: 229 RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLT 277
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 218 (81.8 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
G ++ +V +K + D + +A G HHA GFC ++ +A + H +
Sbjct: 115 GGSVASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH--Q 168
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPL 193
RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N PL
Sbjct: 169 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPL 228
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G D + +F V+ + F+P +++ G D+ D L T
Sbjct: 229 RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLT 277
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 218 (81.8 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
G ++ +V +K + D + +A G HHA GFC ++ +A + H +
Sbjct: 115 GGSVASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH--Q 168
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPL 193
RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N PL
Sbjct: 169 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPL 228
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G D + +F V+ + F+P +++ G D+ D L T
Sbjct: 229 RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLT 277
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 218 (81.8 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
G ++ +V +K + D + +A G HHA GFC ++ +A + H +
Sbjct: 115 GGSVASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH--Q 168
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPL 193
RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N PL
Sbjct: 169 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPL 228
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G D + +F V+ + F+P +++ G D+ D L T
Sbjct: 229 RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLT 277
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 218 (81.8 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
G ++ +V +K + D + +A G HHA GFC ++ +A + H +
Sbjct: 115 GGSVASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH--Q 168
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPL 193
RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N PL
Sbjct: 169 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPL 228
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G D + +F V+ + F+P +++ G D+ D L T
Sbjct: 229 RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLT 277
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 218 (81.8 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
G ++ +V +K + D + +A G HHA GFC ++ +A + H +
Sbjct: 115 GGSVASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH--Q 168
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPL 193
RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N PL
Sbjct: 169 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPL 228
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G D + +F V+ + F+P +++ G D+ D L T
Sbjct: 229 RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLT 277
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 218 (81.8 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
G ++ +V +K + D + +A G HHA GFC ++ +A + H +
Sbjct: 115 GGSVASAVKLNKQQTDIAVNWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH--Q 168
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPL 193
RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N PL
Sbjct: 169 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPL 228
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G D + +F V+ + F+P +++ G D+ D L T
Sbjct: 229 RDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLT 277
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 217 (81.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 51/177 (28%), Positives = 85/177 (48%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ + R H RV ID DVHHG+G +AFY + + S
Sbjct: 148 HHAKKSEASGFCYTNDIVLGIIELLRYH--PRVLYIDTDVHHGDGVEEAFYTNDRVMTCS 205
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G + PGTG + ++G G G+ +N+PL G D + +++F +I + ++P I
Sbjct: 206 FHKFGEFFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAI 265
Query: 223 LVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLS 279
++ G D+ D L + + AN + L G + GGY + +++
Sbjct: 266 VLQCGGDSLSGDRLGPFNLSMRGH----ANCVNFVRSL-GVPVMVLGGGGYTIRNVA 317
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 217 (81.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 51/177 (28%), Positives = 85/177 (48%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ + R H RV ID DVHHG+G +AFY + + S
Sbjct: 148 HHAKKSEASGFCYTNDIVLGIIELLRYH--PRVLYIDTDVHHGDGVEEAFYTNDRVMTCS 205
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G + PGTG + ++G G G+ +N+PL G D + +++F +I + ++P I
Sbjct: 206 FHKFGEFFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAI 265
Query: 223 LVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLS 279
++ G D+ D L + + AN + L G + GGY + +++
Sbjct: 266 VLQCGGDSLSGDRLGPFNLSMRGH----ANCVNFVRSL-GVPVMVLGGGGYTIRNVA 317
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 197 (74.4 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 59 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 116
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 117 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTC 176
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 177 IVLQCGADSLGCDRL 191
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 216 (81.1 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 55/185 (29%), Positives = 85/185 (45%)
Query: 98 LIRPPG--HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+I PG HHA GFC ++ + + H KRV ID D+HHG+G +AF +
Sbjct: 153 VINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYH--KRVLYIDIDIHHGDGVQEAFNN 210
Query: 156 DPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
+ +S H+ G Y PG+G I + G G G+ +N+PL D +F VI
Sbjct: 211 SDRVMTVSFHRFGQYFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYLKLFESVISGVE 270
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ F P+ I++ G D+ D L + + +K L K L + GGY
Sbjct: 271 ENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPL-----MVLGGGGYT 325
Query: 275 LNSLS 279
L +++
Sbjct: 326 LRNVA 330
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 196 (74.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 57/204 (27%), Positives = 91/204 (44%)
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKR 135
+++ DS+A R + +LI H + GFC + + +R +R
Sbjct: 25 VSMCDSLAKIPKRAS--MVHSLIEAYALHKQMRDEASGFCYLNDAVLGILRLRRK--FER 80
Query: 136 VFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPL 193
+ +D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 81 ILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPI 140
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT-TGTYYMLAAN 252
G D + V+ Q F P +++ G D DP+ S T G L
Sbjct: 141 QDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYI 200
Query: 253 IK-QLAKDLCGSRCVFFLEGGYNL 275
++ QLA + G GGYNL
Sbjct: 201 LQWQLATLILGG-------GGYNL 217
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 215 (80.7 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ ++ + H +RV ID D+HHG+G +AFY + +S
Sbjct: 135 HHAKKSEASGFCYTNDIVLSILELLKHH--ERVLYIDIDIHHGDGVEEAFYTTDRVMTVS 192
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G+ +LN PL G D + +++F +I ++P +
Sbjct: 193 FHKYGDYFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIRSVMDFYRPGAV 252
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 253 VIQCGADSLTGDRLGCFNLT 272
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 212 (79.7 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 73/262 (27%), Positives = 113/262 (43%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++AS H AY+ L+K + IE G G AT F + A GA
Sbjct: 62 ASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSIEYGLGYDCPATEGIFDYAAAVGGA--- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R R+
Sbjct: 119 ---TITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FDRIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT-TGTYYMLAANIK 254
D + V+ F P +++ G D DP+ S T G L ++
Sbjct: 234 CIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 293
Query: 255 -QLAKDLCGSRCVFFLEGGYNL 275
+LA + G GGYNL
Sbjct: 294 WELATLILGG-------GGYNL 308
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 216 (81.1 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 60/225 (26%), Positives = 106/225 (47%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKA----MDRASQQGIILIEGSG-PTYATATTFQ 67
+E+ PA+ ++ H Y+ + + +D +++ I G P + F
Sbjct: 60 MEIYRAKPATKQEMCQFHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGL--F- 116
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARY 126
E +G G ++ + ++ + D + +A G HHA GFC ++ +
Sbjct: 117 EYCGISGGG-SMEGAARLNRGKCDIAINYA----GGLHHAKKSEASGFCYLNDIVLGIIE 171
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGE 185
R H RV ID DVHHG+G +AFY + S H+ G + PGTG++ ++G G G+
Sbjct: 172 LLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDIGVGKGK 229
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
++N+PL G D ++VF VI + ++P I++ G D+
Sbjct: 230 YHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDS 274
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 216 (81.1 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 60/225 (26%), Positives = 106/225 (47%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKA----MDRASQQGIILIEGSG-PTYATATTFQ 67
+E+ PA+ ++ H Y+ + + +D +++ I G P + F
Sbjct: 60 MEIYRAKPATKQEMCQFHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGL--F- 116
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARY 126
E +G G ++ + ++ + D + +A G HHA GFC ++ +
Sbjct: 117 EYCGISGGG-SMEGAARLNRGKCDIAINYA----GGLHHAKKSEASGFCYLNDIVLGIIE 171
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGE 185
R H RV ID DVHHG+G +AFY + S H+ G + PGTG++ ++G G G+
Sbjct: 172 LLRYH--PRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDIGVGKGK 229
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
++N+PL G D ++VF VI + ++P I++ G D+
Sbjct: 230 YHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDS 274
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 214 (80.4 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
G ++ +V +K + D + +A G HHA GFC ++ +A + H +
Sbjct: 116 GGSVAGAVKLNKQQTDIAINWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH--Q 169
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPL 193
RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N PL
Sbjct: 170 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPL 229
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G D + +F ++ + ++P +++ G D+ D L T
Sbjct: 230 RDGIDDESYEAIFKPIMSKVMEMYQPSAVVLQCGADSLSGDRLGCFNLT 278
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 212 (79.7 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 111 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 168
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N P+ G D + +F +I + ++P +
Sbjct: 169 FHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV 228
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 229 VLQCGADSLSGDRLGCFNLT 248
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 212 (79.7 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 111 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 168
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N P+ G D + +F +I + ++P +
Sbjct: 169 FHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV 228
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 229 VLQCGADSLSGDRLGCFNLT 248
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 212 (79.7 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N P+ G D + +F +I + ++P +
Sbjct: 199 FHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV 258
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 259 VLQCGADSLSGDRLGCFNLT 278
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 212 (79.7 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N P+ G D + +F +I + ++P +
Sbjct: 199 FHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV 258
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 259 VLQCGADSLSGDRLGCFNLT 278
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 212 (79.7 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N P+ G D + +F +I + ++P +
Sbjct: 199 FHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV 258
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 259 VLQCGADSLSGDRLGCFNLT 278
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 212 (79.7 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N P+ G D + +F +I + ++P +
Sbjct: 199 FHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV 258
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 259 VLQCGADSLSGDRLGCFNLT 278
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 213 (80.0 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 50/170 (29%), Positives = 83/170 (48%)
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+G ++ +V +K + D + +A G HHA GFC ++ +A + H
Sbjct: 113 SGGSVAGAVKLNKQQTDIAINWA----GGLHHAKKSEASGFCYVNDIVLAILELLKYH-- 166
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLP 192
+RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N P
Sbjct: 167 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFP 226
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
L G D + +F ++ + ++P I + G D+ D L T
Sbjct: 227 LRDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGDRLGCFNLT 276
>CGD|CAL0004270 [details] [associations]
symbol:HOS3 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005935
"cellular bud neck" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=IEA] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 178 (67.7 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 35/99 (35%), Positives = 52/99 (52%)
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
G Y T T G + VDS+ + + + + L F +IRPPGHH+ P GFC+
Sbjct: 268 GDIYLTPKTINAIEGVIGTIESAVDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCL 327
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
NV I YA +G+ I+D D+HHG+G+ D ++
Sbjct: 328 LNNVQIGIEYAFEQYGVTHCAILDIDLHHGDGSQDICWE 366
Score = 82 (33.9 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 217 FKPDLILVSAGYDAHVLD-PLAS---LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGG 272
FKP LI +SAG+DA + P + T Y ++ +LAK + + FLEGG
Sbjct: 517 FKP-LIAISAGFDASQYENPQMQRHGINVPTSFYSTFTKDVVKLAKIHTNGKVLSFLEGG 575
Query: 273 YNLNSLSYSV 282
Y+ +LS +
Sbjct: 576 YSDGALSTGI 585
>UNIPROTKB|Q5AF34 [details] [associations]
symbol:HOS3 "Likely histone deacetylase Hos3p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 178 (67.7 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 35/99 (35%), Positives = 52/99 (52%)
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
G Y T T G + VDS+ + + + + L F +IRPPGHH+ P GFC+
Sbjct: 268 GDIYLTPKTINAIEGVIGTIESAVDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCL 327
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
NV I YA +G+ I+D D+HHG+G+ D ++
Sbjct: 328 LNNVQIGIEYAFEQYGVTHCAILDIDLHHGDGSQDICWE 366
Score = 82 (33.9 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 217 FKPDLILVSAGYDAHVLD-PLAS---LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGG 272
FKP LI +SAG+DA + P + T Y ++ +LAK + + FLEGG
Sbjct: 517 FKP-LIAISAGFDASQYENPQMQRHGINVPTSFYSTFTKDVVKLAKIHTNGKVLSFLEGG 575
Query: 273 YNLNSLSYSV 282
Y+ +LS +
Sbjct: 576 YSDGALSTGI 585
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 210 (79.0 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 69/229 (30%), Positives = 103/229 (44%)
Query: 18 FSP--ASVDDIASVHARAYVSGLEKAM-DRASQQGIIL----IEGSGPTYATATTFQESL 70
FSP A+ +++ H Y+ L++ D A Q I P + T++ S
Sbjct: 71 FSPRMATFGEMSEFHREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDG--TYEFSQ 128
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQR 129
+AGA S+ AS+ A+ G HHA GFC ++ +A R
Sbjct: 129 RSAGA------SLDASRKLVQGQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLR 182
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ-DGSY-PGTGKIDEVGRGDGEGS 187
RV ID D+HHG+G AFY+ + +S H+ +G + P TG DE G G+
Sbjct: 183 F--FPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYF 240
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
LN+PL G GD ++F +I P F+P I++ G D+ D L
Sbjct: 241 ALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDRL 289
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 212 (79.7 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 203 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 260
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N P+ G D + +F +I + ++P +
Sbjct: 261 FHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV 320
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 321 VLQCGADSLSGDRLGCFNLT 340
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 212 (79.7 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 235 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 292
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N P+ G D + +F +I + ++P +
Sbjct: 293 FHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV 352
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 353 VLQCGADSLSGDRLGCFNLT 372
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 205 (77.2 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ + + H RV ID DVHHG+G +AFY + +S
Sbjct: 136 HHAKKCDASGFCYINDLVLGILELLKHH--PRVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
Query: 164 THQDGS--YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G +PGTG + E+G +G+ +N+PL G D++ +F +I + ++P
Sbjct: 194 FHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGA 253
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 254 IVLQCGADSLARDRL 268
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 200 (75.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 51/180 (28%), Positives = 84/180 (46%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA + GFC +V + + ++A L ++ +DFD+HHG+G AF I +S
Sbjct: 210 HHAFKQRASGFCYINDVVLLIQRLRKAK-LNKITYVDFDLHHGDGVEKAFQYSKQIQTIS 268
Query: 164 TH--QDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H + G +PGTG + + R D + +N+PL G D + + +++ P +R +P+
Sbjct: 269 VHLYEPGFFPGTGSLSD-SRKDK--NVVNIPLKHGCDDNYLELIASKIVNPLIERHEPEA 325
Query: 222 ILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+++ G D + D Q T + NI + R FL GG N L S
Sbjct: 326 LIIECGGDGLLGDRFNEWQLTIRGLSRIIINIMKSYP-----RAHIFLLGGGGYNDLLMS 380
Score = 42 (19.8 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGL 38
E+ F A DD+ H+++Y+ L
Sbjct: 45 EVLTFPYARKDDLLEFHSKSYIDYL 69
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 203 (76.5 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 48/135 (35%), Positives = 68/135 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I+ + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVISILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + R +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTC 251
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 252 IVLQCGADSLGCDRL 266
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 185 (70.2 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 54/184 (29%), Positives = 85/184 (46%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++A+ H AY+ L+K IE G G AT F + A GA
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGA--- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R +R+
Sbjct: 119 ---TITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FERIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
Query: 196 GSGD 199
G D
Sbjct: 234 GIQD 237
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 199 (75.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 49/155 (31%), Positives = 73/155 (47%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID DVHHG+G +AFY + S
Sbjct: 139 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDVHHGDGVQEAFYLTDRVMTAS 196
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + E+G G ++N+PL G D + VF +I ++P
Sbjct: 197 FHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTA 256
Query: 222 ILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
I++ G D+ D L +T + +K+L
Sbjct: 257 IVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKEL 291
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 198 (74.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTC 251
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 252 IVLQCGADSLGCDRL 266
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 198 (74.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTC 251
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 252 IVLQCGADSLGCDRL 266
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 198 (74.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 45/129 (34%), Positives = 65/129 (50%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTC 251
Query: 222 ILVSAGYDA 230
I++ G D+
Sbjct: 252 IVLQCGADS 260
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 198 (74.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTC 251
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 252 IVLQCGADSLGCDRL 266
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 198 (74.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTC 251
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 252 IVLQCGADSLGCDRL 266
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 198 (74.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTC 251
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 252 IVLQCGADSLGCDRL 266
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 178 (67.7 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 36/97 (37%), Positives = 52/97 (53%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 115 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 172
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
H+ G Y PGTG + ++G G G+ +N PL G D
Sbjct: 173 FHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDD 209
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 197 (74.4 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTC 251
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 252 IVLQCGADSLGCDRL 266
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 197 (74.4 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTC 251
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 252 IVLQCGADSLGCDRL 266
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 197 (74.4 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ I + H RV ID D+HHG+G +AFY + +S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 164 THQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ G+Y PGTG + EVG G LN+PL G D + + +F VI ++P
Sbjct: 192 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTC 251
Query: 222 ILVSAGYDAHVLDPL 236
I++ G D+ D L
Sbjct: 252 IVLQCGADSLGCDRL 266
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 192 (72.6 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 47/139 (33%), Positives = 69/139 (49%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA P GFC+F ++A+ ++Y ++ + +V I D DVH G+GT D D +S
Sbjct: 120 HHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILADTEDAITVS 179
Query: 164 THQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLIL 223
H + ++P K S ++PLP G GD V +++ +KPDL+L
Sbjct: 180 LHCEKNFPAR-KAQ---------SDWDIPLPMGMGDANYLNVVDDLLNYLLPFYKPDLVL 229
Query: 224 VSAGYDAHVLDPLASLQFT 242
AG D H D L LQ T
Sbjct: 230 YDAGVDVHKDDALGYLQLT 248
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 204 (76.9 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 81/316 (25%), Positives = 128/316 (40%)
Query: 21 ASVDDIASVHARAYVSGLEK-AMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
AS++++A H +Y+ L K + D + G G + AA G
Sbjct: 1061 ASIEEMAVFHTDSYLQHLHKISQDGDNDDPQSADFGLGYDCPVVEGIFDYAAAVGGA--- 1117
Query: 80 VDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
++ A++N D A+ G HHA GFC + + + + RV
Sbjct: 1118 --TLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGFCYVNDAVLGILKLREKYD--RVLY 1173
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPGG 196
+D D+HHG+G DAF + +S H+ G +PGTG + + G G G +N+P G
Sbjct: 1174 VDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDG 1233
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT-GTY----YMLAA 251
D F V+ F P+ +++ G D DP+ S T+ G Y+L
Sbjct: 1234 VRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDPMCSFNMTSVGVAKCLTYILGW 1293
Query: 252 NIKQL-----AKDLCGS-RCVFFLEGGYNLNSLSYSVAD-SFRAFLGEPSKASEFDNPAI 304
+ L +L + RC +L G +LS + D F G P + E +P+
Sbjct: 1294 ELPTLLLGGGGYNLANTARCWTYLTGTVLGQTLSSEIPDHEFFTEYG-PDYSLEI-SPSC 1351
Query: 305 LYEEPSAKVKQAIERV 320
P Q +ERV
Sbjct: 1352 ---RPDRNESQHLERV 1364
Score = 43 (20.2 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 1 MELTSEFRGSEIIELKNFSPASVD----DIAS--VHARAYVSGLEKAMDRASQQGIILIE 54
M++ E R S I+ K FS S D ++A+ VH+ GL K M R + + IE
Sbjct: 1006 MKMLEELRFSWSIQSKTFSGQSFDAEPVELAASMVHSLIEAYGLLKYM-RVVKPHVASIE 1064
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 184 (69.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 54/184 (29%), Positives = 84/184 (45%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++A+ H AY+ L+K IE G G AT F + A GA
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAVGGA--- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R R+
Sbjct: 119 ---TITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FDRIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PGTG + +VG G G ++N+P+
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
Query: 196 GSGD 199
G D
Sbjct: 234 GIQD 237
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 196 (74.1 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 47/158 (29%), Positives = 70/158 (44%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A R H RV ID DVHHG+G AF+ + +S
Sbjct: 174 HHAKKAEASGFCYVNDIVLAILQLLRIH--PRVMYIDIDVHHGDGVEQAFWSTDRVLTVS 231
Query: 164 THQ---DGSYPGTGKIDEVGR----GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
H+ + +PGTG +D G G +N+PL G D + +F +V+ C +
Sbjct: 232 FHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPLHDGIDDESYVQLFKDVVGACVSK 291
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
F+P I++ G D+ D L + A K
Sbjct: 292 FRPAAIVLQCGADSLGCDRLGCFNLNVAAHGACVAYTK 329
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 195 (73.7 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 164 -THQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
++PGTG + ++G G G+ +N P+ G D + +F +I + ++P +
Sbjct: 199 EVSMVNNFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAV 258
Query: 223 LVSAGYDAHVLDPLASLQFT 242
++ G D+ D L T
Sbjct: 259 VLQCGADSLSGDRLGCFNLT 278
>SGD|S000006037 [details] [associations]
symbol:HOS3 "Trichostatin A-insensitive homodimeric histone
deacetylase (HDAC)" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000083 "regulation of transcription involved in
G1/S phase of mitotic cell cycle" evidence=IGI;IPI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005935 "cellular bud neck"
evidence=IDA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] SGD:S000006037 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0005935 GO:GO:0045944
GO:GO:0006351 EMBL:BK006949 EMBL:U43503 GO:GO:0070932 GO:GO:0000083
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 PIR:S62006
RefSeq:NP_015209.1 ProteinModelPortal:Q02959 DIP:DIP-8047N
IntAct:Q02959 MINT:MINT-2781063 STRING:Q02959 PaxDb:Q02959
PeptideAtlas:Q02959 EnsemblFungi:YPL116W GeneID:855987
KEGG:sce:YPL116W CYGD:YPL116w HOGENOM:HOG000246666 KO:K11484
OMA:AAITMYP OrthoDB:EOG4BZR9V NextBio:980834 Genevestigator:Q02959
GermOnline:YPL116W Uniprot:Q02959
Length = 697
Score = 173 (66.0 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 40/121 (33%), Positives = 55/121 (45%)
Query: 56 SGPTYATATTFQESLAAAGAGIALVDSVAASKNRPD-PPLGFALIRPPGHHAIPKGPMGF 114
SG Y ++ T + GA VDS+ + F IRPPGHH P GF
Sbjct: 146 SGDIYLSSKTIKALQGTIGAIETGVDSIFKGPSAEHISNRAFVAIRPPGHHCHYGTPSGF 205
Query: 115 CVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTG 174
C+ N +A YA + + V ++DFD+HHG+GT D + +D SY G
Sbjct: 206 CLLNNAHVAIEYAYDTYNVTHVVVLDFDLHHGDGTQDICWKRAGFKPEEEPEDSSYDDFG 265
Query: 175 K 175
K
Sbjct: 266 K 266
Score = 67 (28.6 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 217 FKPDLILVSAGYDAHVLDPLA----SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGG 272
FK L+++SAG+DA + + S+ T Y + +LA+ C + + +EGG
Sbjct: 359 FK-GLVVISAGFDASEFEQTSMQRHSVNVPTSFYTTFTKDALKLAQMHCHGKVLSLMEGG 417
Query: 273 YN 274
Y+
Sbjct: 418 YS 419
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 183 (69.5 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 54/171 (31%), Positives = 78/171 (45%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC+F ++AIAA +A + +V IID DVHHG+GT + +I LS
Sbjct: 125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLS 184
Query: 164 THQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLIL 223
H D ++P S++++ +GD + F +V+ +PDLIL
Sbjct: 185 FHCDKNFPARKP----------ASSMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLIL 234
Query: 224 VSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK-DLCGSRCVFFLEGGY 273
AG D H D L L + + LAK + CV + GGY
Sbjct: 235 YDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACV--IGGGY 283
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 183 (69.5 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 54/171 (31%), Positives = 78/171 (45%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC+F ++AIAA +A + +V IID DVHHG+GT + +I LS
Sbjct: 125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLS 184
Query: 164 THQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLIL 223
H D ++P S++++ +GD + F +V+ +PDLIL
Sbjct: 185 FHCDKNFPARKP----------ASSMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLIL 234
Query: 224 VSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK-DLCGSRCVFFLEGGY 273
AG D H D L L + + LAK + CV + GGY
Sbjct: 235 YDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACV--IGGGY 283
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 188 (71.2 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 38/108 (35%), Positives = 57/108 (52%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ +A + H +RV ID D+HHG+G +AFY + +S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYH--QRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVI 210
H+ G Y PGTG + ++G G G+ +N P+ G D + +F VI
Sbjct: 199 FHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPVI 246
>UNIPROTKB|E7ENE4 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
Length = 272
Score = 177 (67.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 54/198 (27%), Positives = 86/198 (43%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++A+ H AY+ L+K IE G G AT F + A GA
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGA--- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R +R+
Sbjct: 119 ---TITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FERIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D D+HHG+G DAF + +S H+ G +PG + +VG G G ++N+P+
Sbjct: 174 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGKSDVSDVGLGKGRYYSVNVPIQD 233
Query: 196 GSGDTAMRTVFHEVIVPC 213
G D + V C
Sbjct: 234 GIQDEKYYQICESVRTSC 251
>UNIPROTKB|Q4K5L2 [details] [associations]
symbol:PFL_5403 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
KEGG:pfl:PFL_5403 PATRIC:19880291
BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
Length = 306
Score = 177 (67.4 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 45/139 (32%), Positives = 65/139 (46%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA P GFC+F ++A+ + Y + + RV I D DVH G+GT D +S
Sbjct: 120 HHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDGTARILQHTADAVTVS 179
Query: 164 THQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLIL 223
H + ++P K S ++PLP G GD V + + ++PDL+L
Sbjct: 180 LHCEKNFPAR-KAQ---------SDWDIPLPMGMGDADYLNVVDDTLNYLLPLYQPDLVL 229
Query: 224 VSAGYDAHVLDPLASLQFT 242
AG D H D L L+ T
Sbjct: 230 YDAGVDVHQDDALGYLKLT 248
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 178 (67.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 42/133 (31%), Positives = 64/133 (48%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HH GFC +V ++ ++ L VF +D D+HHG+G +AF + S
Sbjct: 201 HHCHKSHAAGFCYVNDVVLSINILRK--NLGSVFYLDLDLHHGDGVENAFKFSKKVATCS 258
Query: 164 THQ-D-GSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ D G YPGTG + + E +T N+P G D++M + E++ P F P
Sbjct: 259 IHRYDIGFYPGTGSL----KSSRE-NTYNIPTEKGLNDSSMLWIIKEIVAPLISNFGPRA 313
Query: 222 ILVSAGYDAHVLD 234
I++ G D LD
Sbjct: 314 IVIQCGCDGLALD 326
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 178 (67.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 42/133 (31%), Positives = 64/133 (48%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HH GFC +V ++ ++ L VF +D D+HHG+G +AF + S
Sbjct: 201 HHCHKSHAAGFCYVNDVVLSINILRK--NLGSVFYLDLDLHHGDGVENAFKFSKKVATCS 258
Query: 164 THQ-D-GSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
H+ D G YPGTG + + E +T N+P G D++M + E++ P F P
Sbjct: 259 IHRYDIGFYPGTGSL----KSSRE-NTYNIPTEKGLNDSSMLWIIKEIVAPLISNFGPRA 313
Query: 222 ILVSAGYDAHVLD 234
I++ G D LD
Sbjct: 314 IVIQCGCDGLALD 326
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 113 (44.8 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 38/134 (28%), Positives = 59/134 (44%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIE-GSG-PTYATATTFQESLAAAGAGIA 78
AS++++A+ H AY+ L+K IE G G AT F + A GA
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGA--- 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
++ A++ D A+ G HHA GFC + + +R +R+
Sbjct: 119 ---TITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK--FERIL 173
Query: 138 IIDFDVHHGNGTND 151
+D D+HHG+GT D
Sbjct: 174 YVDLDLHHGDGTGD 187
Score = 105 (42.0 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 32/106 (30%), Positives = 47/106 (44%)
Query: 172 GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH 231
GTG + +VG G G ++N+P+ G D + V+ Q F P +++ G D
Sbjct: 184 GTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTI 243
Query: 232 VLDPLASLQFT-TGTYYMLAANIK-QLAKDLCGSRCVFFLEGGYNL 275
DP+ S T G L ++ QLA + G GGYNL
Sbjct: 244 AGDPMCSFNMTPVGIGKCLKYILQWQLATLILGG-------GGYNL 282
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 54/191 (28%), Positives = 86/191 (45%)
Query: 53 IEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPM 112
++ GP + F A AG I S AA NR + + A+ G H + K
Sbjct: 103 VDWDGPVFHNL--FDYCRAYAGGSI----SAAAKLNRQEADI--AINWAGGMHHVKKDKA 154
Query: 113 -GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP 171
GF +V +A + KRV I+ HG+ +AF D + +S H+ G
Sbjct: 155 SGFGYVNDVVLAI--LELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGD-- 210
Query: 172 GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH 231
TG I + G G G+ +LN PL G D ++R +F VI + ++P++I++ G D+
Sbjct: 211 -TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSL 269
Query: 232 VLDPLASLQFT 242
DP + +
Sbjct: 270 AGDPFGTFNLS 280
>ASPGD|ASPL0000069638 [details] [associations]
symbol:hosB species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001304 EMBL:AACD01000117 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K11484
OrthoDB:EOG4BZR9V RefSeq:XP_664623.1 ProteinModelPortal:Q5AXG1
EnsemblFungi:CADANIAT00000457 GeneID:2870089 KEGG:ani:AN7019.2
HOGENOM:HOG000170608 OMA:DLYLCSE Uniprot:Q5AXG1
Length = 1125
Score = 162 (62.1 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 38/103 (36%), Positives = 51/103 (49%)
Query: 57 GPTYATATTF--QESLAA-AGAGIALVDSVAASKNRPDPPL-GFALIRPPGHHAIPKGPM 112
GP + + ESL A GA + + + A + P P F IRPPGHH P
Sbjct: 317 GPVFHEGDLYLCSESLDAFEGALGGVCEGIDAVFS-PGPTKRAFVCIRPPGHHCSSGNPS 375
Query: 113 GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
GFC NV + YA H L I+DFD+HHG+G+ D ++
Sbjct: 376 GFCWINNVHVGISYAAMTHDLTHAAILDFDLHHGDGSQDIAWE 418
Score = 59 (25.8 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 222 ILVSAGYDAHVLDPLA----SLQFTTGTYYMLAANIKQLAKDL-CG--SRCVFFLEGGYN 274
I +SAG+DA + + + T Y A++ ++A++ G R V LEGGY+
Sbjct: 527 IFISAGFDASEWEGMGMQRHKVNVPTEFYARFTADVVRMAEEEGLGVDGRIVSVLEGGYS 586
Query: 275 LNSLSYSVADSFRAFLGEPSKASEFDN 301
+L+ V S + LG+ D+
Sbjct: 587 NRALTTGVL-SHLSGLGDTKGVQLLDD 612
>UNIPROTKB|Q47YS1 [details] [associations]
symbol:CPS_3373 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 165 (63.1 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 48/173 (27%), Positives = 77/173 (44%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC+ ++ +AA + + +V I D DVH G+GT ++ ++F +S
Sbjct: 120 HHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVS 179
Query: 164 THQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLIL 223
H + ++P ++ S L+ LP G+ D+ + FKPD ++
Sbjct: 180 IHGEKNFPHRKQV----------SNLDFALPKGTTDSLYLETVDNALNKAFSSFKPDAVI 229
Query: 224 VSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC---GSRCVFFLEGGY 273
AG D H D L L +T +LA + +L D C G + GGY
Sbjct: 230 YDAGVDIHCNDDLGHLDISTQG--VLARD--KLVFDYCKLKGIPIAAVIGGGY 278
>TIGR_CMR|CPS_3373 [details] [associations]
symbol:CPS_3373 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 165 (63.1 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 48/173 (27%), Positives = 77/173 (44%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC+ ++ +AA + + +V I D DVH G+GT ++ ++F +S
Sbjct: 120 HHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVS 179
Query: 164 THQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLIL 223
H + ++P ++ S L+ LP G+ D+ + FKPD ++
Sbjct: 180 IHGEKNFPHRKQV----------SNLDFALPKGTTDSLYLETVDNALNKAFSSFKPDAVI 229
Query: 224 VSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC---GSRCVFFLEGGY 273
AG D H D L L +T +LA + +L D C G + GGY
Sbjct: 230 YDAGVDIHCNDDLGHLDISTQG--VLARD--KLVFDYCKLKGIPIAAVIGGGY 278
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 169 (64.5 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKR 135
G ++ +V +K + D + +A HHA GFC ++ +A + L+R
Sbjct: 103 GGSVASAVKLNKQQTDIAVNWA---GDLHHAKNSEASGFCYVNDIVLAI--LELLKYLQR 157
Query: 136 VFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
V +D D HHG+GT +AFY + +S H ++P TG + ++G G G+ +N PL
Sbjct: 158 VLCMDIDTHHGDGTEEAFYTADWVMTVSFH---NFPVTGDLRDIGAGKGKYYAINYPLRD 214
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
D + +F V+ ++ +P +++ G D+ D L S T
Sbjct: 215 CIDDESCEAIFKPVM---SKVMEPSAVVLQCGSDSLSGDWLGSFNLT 258
>UNIPROTKB|Q8EFZ9 [details] [associations]
symbol:SO_1815 "Histone deacetylase superfamily protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 161 (61.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 69/264 (26%), Positives = 107/264 (40%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
+P + ++I VH R YV E+ +D + G + A SLA G +
Sbjct: 48 TPMTAEEIMQVHHRDYV---EQFIDGTLATSALRRIGFPWSEALVERTLHSLA----GTS 100
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
L ++A G AL G HHA + G+C+F ++ IAAR L ++
Sbjct: 101 LTAALALQT-------GIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKIL 153
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
I D DVH G+GT I S H ++P + S ++ L G+
Sbjct: 154 IFDCDVHQGDGTATLSQLHQGIISCSIHCKDNFPSRK----------QHSHYDIELVKGT 203
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
D+A + + + +PDLIL AG D H D L LQ + Y + +A
Sbjct: 204 DDSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLSMA 263
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYS 281
+ + GGY+ ++L S
Sbjct: 264 R-AANIPVAAVIGGGYSRDALQLS 286
>TIGR_CMR|SO_1815 [details] [associations]
symbol:SO_1815 "histone deacetylase/AcuC/AphA family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 161 (61.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 69/264 (26%), Positives = 107/264 (40%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
+P + ++I VH R YV E+ +D + G + A SLA G +
Sbjct: 48 TPMTAEEIMQVHHRDYV---EQFIDGTLATSALRRIGFPWSEALVERTLHSLA----GTS 100
Query: 79 LVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
L ++A G AL G HHA + G+C+F ++ IAAR L ++
Sbjct: 101 LTAALALQT-------GIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKIL 153
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
I D DVH G+GT I S H ++P + S ++ L G+
Sbjct: 154 IFDCDVHQGDGTATLSQLHQGIISCSIHCKDNFPSRK----------QHSHYDIELVKGT 203
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
D+A + + + +PDLIL AG D H D L LQ + Y + +A
Sbjct: 204 DDSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLSMA 263
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYS 281
+ + GGY+ ++L S
Sbjct: 264 R-AANIPVAAVIGGGYSRDALQLS 286
>UNIPROTKB|G4N4X5 [details] [associations]
symbol:MGG_06043 "Histone deacetylase HOS3" species:242507
"Magnaporthe oryzae 70-15" [GO:0004407 "histone deacetylase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005935 "cellular bud
neck" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0005935 EMBL:CM001233 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11484 RefSeq:XP_003711894.1 EnsemblFungi:MGG_06043T0
GeneID:2683932 KEGG:mgr:MGG_06043 Uniprot:G4N4X5
Length = 1141
Score = 165 (63.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 44/131 (33%), Positives = 57/131 (43%)
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
G Y + + + G VD+V +N P F IRPPGHH P GFC
Sbjct: 296 GDLYLCSESLDALEGSLGGVCEAVDAVFTPEN-P-AKRAFVAIRPPGHHCSASFPSGFCW 353
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG----------------TNDAFYDDPDIF 160
NV + + +HGL IIDFD+HHG+G TN A++ P I
Sbjct: 354 VNNVHVGIMHGILSHGLTHAAIIDFDLHHGDGSQAIAWQHNTRGIGLSTNAAWWKKPSIG 413
Query: 161 FLSTHQDGSYP 171
+ S H SYP
Sbjct: 414 YFSLHDINSYP 424
Score = 47 (21.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 222 ILVSAGYDAHVLDPLA----SLQFTTGTYYMLAANIKQLAKDLCGS---RCVFFLEGGYN 274
I +SAG+DA + + T Y L ++ ++A + S R + LEGGY+
Sbjct: 501 IFLSAGFDASEWEGAGMQRHKVNVPTEFYARLTRDVVKIAAEEETSVEGRVISVLEGGYS 560
Query: 275 LNSLSYSVADSFRAFLGE 292
+L + G+
Sbjct: 561 DRALCSGILSHVSGLAGD 578
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 160 (61.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 63/267 (23%), Positives = 106/267 (39%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +D+ VH R Y++ L+ + A+ I + P + + L G +
Sbjct: 65 ATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVLFL-PNFLVQRKVLKPLRTQTGGTIMA 123
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ + I
Sbjct: 124 GKLAVDR-------GWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATI 176
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
ID D H GNG F +D ++ + + YPG G + E L G+
Sbjct: 177 IDLDAHQGNGHERDFMNDHRVYIMDAYNRYIYPGDGFAKRAIKRKVE-------LEWGTE 229
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
DT H + KPD+I+ +AG D DPL L + + + A+
Sbjct: 230 DTEYLQKVHTHVEGALNELKPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFKAAR 289
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADS 285
G + GGY + +ADS
Sbjct: 290 SR-GIPILMVTSGGYQKRTARI-IADS 314
>UNIPROTKB|E7ETT9 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
Uniprot:E7ETT9
Length = 319
Score = 152 (58.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 63/275 (22%), Positives = 105/275 (38%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + L G +
Sbjct: 38 ASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL-PNFLVQRKVLRPLRTQTGGTIMA 96
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ R I
Sbjct: 97 GKLAVER-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATI 149
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
ID D H GNG F DD ++ + + YPG D + + + L G+
Sbjct: 150 IDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPG----DRFAK---QAIRRKVELEWGTE 202
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D I Q PD+++ +AG D D L L + + ++ +
Sbjct: 203 DDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVR 262
Query: 259 DLCGSRCVFFL--EGGYNLNSLSYSVADSFRAFLG 291
G R + GGY + +ADS G
Sbjct: 263 ---GRRVPILMVTSGGYQKRTARI-IADSILNLFG 293
>UNIPROTKB|Q96DB2 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
Length = 347
Score = 152 (58.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 63/275 (22%), Positives = 105/275 (38%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + L G +
Sbjct: 66 ASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL-PNFLVQRKVLRPLRTQTGGTIMA 124
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ R I
Sbjct: 125 GKLAVER-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATI 177
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
ID D H GNG F DD ++ + + YPG D + + + L G+
Sbjct: 178 IDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPG----DRFAK---QAIRRKVELEWGTE 230
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D I Q PD+++ +AG D D L L + + ++ +
Sbjct: 231 DDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVR 290
Query: 259 DLCGSRCVFFL--EGGYNLNSLSYSVADSFRAFLG 291
G R + GGY + +ADS G
Sbjct: 291 ---GRRVPILMVTSGGYQKRTARI-IADSILNLFG 321
>UNIPROTKB|Q9GKU5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
fascicularis" [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
Length = 347
Score = 151 (58.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 54/224 (24%), Positives = 89/224 (39%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + L G +
Sbjct: 66 ASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL-PNFLVQRKVLRPLRTQTGGTIMA 124
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ R I
Sbjct: 125 GKLAVER-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATI 177
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
ID D H GNG F DD ++ + + YPG D + + + L G+
Sbjct: 178 IDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPG----DRFAK---QAIRRKVELEWGTE 230
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
D I Q PD+++ +AG D D L L +
Sbjct: 231 DDEYLDKVERNIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSIS 274
>UNIPROTKB|I3LTU6 [details] [associations]
symbol:LOC100738481 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:FP700091
Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
Length = 275
Score = 148 (57.2 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 52/224 (23%), Positives = 90/224 (40%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + + L G +
Sbjct: 65 ASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL-PNFLVQRKVLKPLRTQTGGTIMA 123
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ R I
Sbjct: 124 GKLAVER-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATI 176
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
ID D H GNG F D ++ + + YPG D + + + L +
Sbjct: 177 IDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPG----DRFAK---QAIRRKVELEWATE 229
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
D T + Q +PD+++ +AG D D L L +
Sbjct: 230 DDEYLTKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSIS 273
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 150 (57.9 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 47/182 (25%), Positives = 81/182 (44%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HH + GFC F ++++ +A + RV IID D H GNG DD ++ L
Sbjct: 200 HHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILD 259
Query: 164 THQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLIL 223
+ YP D R + + + + G + D +R + E + ++ F+P+L++
Sbjct: 260 MYNPEIYP----FDYRARRFID-QKVEV-MSGTTTDEYLRKL-DEALEVASRNFQPELVI 312
Query: 224 VSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+AG D DPL L+ + + + A++ V GGY + S + +A
Sbjct: 313 YNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREK-NIPLVMLTSGGY-MKSSARVIA 370
Query: 284 DS 285
DS
Sbjct: 371 DS 372
>UNIPROTKB|B5MCV5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
Bgee:B5MCV5 Uniprot:B5MCV5
Length = 204
Score = 139 (54.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + L G +
Sbjct: 38 ASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL-PNFLVQRKVLRPLRTQTGGTIMA 96
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ R I
Sbjct: 97 GKLAVER-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATI 149
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG 172
ID D H GNG F DD ++ + + YPG
Sbjct: 150 IDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPG 183
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 144 (55.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 53/224 (23%), Positives = 88/224 (39%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + L G +
Sbjct: 66 ASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFL-PNFLVQRKVLRPLRTQTGGTIMA 124
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ R I
Sbjct: 125 GKLAVER-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATI 177
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
ID D H GNG F D ++ + + YPG D + E + L G+
Sbjct: 178 IDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPG----DRFAK---EAIRRKVELEWGTE 230
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
D + Q PD+++ +AG D D L L +
Sbjct: 231 DEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSIS 274
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 144 (55.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 53/224 (23%), Positives = 88/224 (39%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + L G +
Sbjct: 66 ASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFL-PNFLVQRKVLRPLRTQTGGTIMA 124
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ R I
Sbjct: 125 GKLAVER-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATI 177
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
ID D H GNG F D ++ + + YPG D + E + L G+
Sbjct: 178 IDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPG----DRFAK---EAIRRKVELEWGTE 230
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
D + Q PD+++ +AG D D L L +
Sbjct: 231 DEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSIS 274
>UNIPROTKB|F1PSI9 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
Length = 319
Score = 141 (54.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 51/224 (22%), Positives = 89/224 (39%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + + L G +
Sbjct: 38 ASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL-PNFLVQRKVLKPLRTQTGGTIMA 96
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ R I
Sbjct: 97 GKLAMER-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATI 149
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+D D H GNG F D ++ + + YPG D + + + L G+
Sbjct: 150 VDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPG----DRFAK---QAIRRKVELEWGTE 202
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
D + Q PD+++ +AG D D L L +
Sbjct: 203 DDEYLDKVERNLQKALQEHLPDVVVYNAGTDILEGDRLGGLSIS 246
>UNIPROTKB|F1MWX4 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
Length = 386
Score = 140 (54.3 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 50/221 (22%), Positives = 87/221 (39%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + L G +
Sbjct: 65 ASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL-PNFLVQRKVLRPLRTQTGGTIMA 123
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ R G+ + I
Sbjct: 124 GKLAVDR-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATI 176
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+D D H GNG F D ++ + + YPG D + + + L G+
Sbjct: 177 VDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPG----DRFAK---QAIRRKVELEWGTE 229
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
D + Q +PD+++ +AG D D L L
Sbjct: 230 DDEYLQKVERNLEKALQEHRPDIVVYNAGTDILEGDRLGGL 270
>UNIPROTKB|F1SPG6 [details] [associations]
symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00390000003411 EMBL:CU928273
Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
Length = 382
Score = 138 (53.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFL 162
HH GFC + ++ +A ++ +R G+ R IID D H GNG F D ++ +
Sbjct: 141 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIM 200
Query: 163 STHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
+ YPG D + + + L + D T + Q +PD++
Sbjct: 201 DVYNRHIYPG----DRFAK---QAIRRKVELEWATEDDEYLTKVERNLEKALQEHRPDVV 253
Query: 223 LVSAGYDAHVLDPLASLQFT 242
+ +AG D D L L +
Sbjct: 254 VYNAGTDVLEGDRLGGLSIS 273
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 21 ASVDDIASVHARAYVSGLE 39
AS +D+ VH R Y++ L+
Sbjct: 65 ASDEDLLVVHTRRYLNELK 83
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 61/265 (23%), Positives = 104/265 (39%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
D + +H R Y+ L +M+ A + L+ P ++ + AG S+
Sbjct: 85 DQLRRIHTREYLKSLRWSMNVACIAEVPLM-AFVPNRYIQRSYLRPMRFQAAG-----SI 138
Query: 84 AASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVA--IAARYAQRAHGLKRVFIID 140
A K D G+A+ G HH GFC + +++ I + Q ++R+ I+D
Sbjct: 139 LAGKLALD--YGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVD 196
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
D H GNG F + ++ + YP D V + E + L + D
Sbjct: 197 LDAHQGNGHERDFNNVAAVYIFDMYNAFVYPR----DHVAK---ESIRCAVELRNYTEDG 249
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
++ F+PD+++ +AG D DPL +L + + + L
Sbjct: 250 FYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRAL 309
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADS 285
G V L GGY L + + + DS
Sbjct: 310 -GIPVVMLLSGGY-LKASAGVITDS 332
>ZFIN|ZDB-GENE-040704-7 [details] [associations]
symbol:hdac11 "histone deacetylase 11" species:7955
"Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
Length = 366
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 68/284 (23%), Positives = 111/284 (39%)
Query: 6 EFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATT 65
+F EII L AS D+ VH Y++ L+ ++ A+ I + P +
Sbjct: 64 QFITDEIIVLAR--EASEADLLVVHTARYLNRLKWSLVVATITEIPPLLFL-PNFLVQRK 120
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAA 124
L G + +A + G+A+ G HH GFC + ++ +A
Sbjct: 121 VLRPLRTQTGGTIMAGKLAIDR-------GWAINVGGGFHHCSSDKGGGFCAYADITLAI 173
Query: 125 RYA-QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
++ +R G+ IID D H GNG F +D ++ + + YPG G +
Sbjct: 174 KFLFERVEGVASATIIDLDAHQGNGHERDFLEDRRVYIMDVYNRHIYPGDGYAKRAIKRK 233
Query: 184 GEGSTLNLPLPGGSGDTA-MRTV-FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
E L G+ D+ ++ V H +PD+I+ +AG D DPL L
Sbjct: 234 VE-------LDWGTEDSEYLQKVDLHSE--GALNEARPDIIIYNAGTDILDGDPLGGLAI 284
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADS 285
+ I + A+ G + GGY + +ADS
Sbjct: 285 SPQGIIKRDEIIFRAARRR-GIPILMVTSGGYQKKTARI-IADS 326
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 114 (45.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 162 LSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKP 219
+S H+ G +PGTG + +VG G G ++N+P+ G D + V+ F P
Sbjct: 3 VSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNP 62
Query: 220 DLILVSAGYDAHVLDPLASLQFT-TGTYYMLAANIK-QLAKDLCGSRCVFFLEGGYNL 275
+++ G D DP+ S T G L ++ QLA + G GGYNL
Sbjct: 63 KAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGET-----GGYNL 115
>WB|WBGene00007953 [details] [associations]
symbol:hda-11 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 133 (51.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 58/257 (22%), Positives = 99/257 (38%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
+++ VH R Y+ + + +A+Q I G P + L G L ++
Sbjct: 70 EELTRVHDRKYLKSVRNPI-KAAQIVEIPFVGCLPPCIIESKLLHPLRLQAGGTVLAANL 128
Query: 84 AASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
A G+A+ G HHA G GFC + ++ +A + ++D D
Sbjct: 129 ALKH-------GWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLD 181
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
H GNG F D+P++F YP D R + + + G + DT+
Sbjct: 182 AHQGNGHARDFADNPNVFVFDVFNPYVYPH----DREAR---QFINRAVHVNGHTTDTSY 234
Query: 203 RTVFHEVIVPCA---QRFKP---DLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
+ + + C ++ P D I+ +AG D + DPL +++ + + L
Sbjct: 235 LSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNL 294
Query: 257 AKDLCGSRCVFFLEGGY 273
AK G GGY
Sbjct: 295 AKSK-GIPICMVTSGGY 310
>UNIPROTKB|Q18477 [details] [associations]
symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 133 (51.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 58/257 (22%), Positives = 99/257 (38%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
+++ VH R Y+ + + +A+Q I G P + L G L ++
Sbjct: 70 EELTRVHDRKYLKSVRNPI-KAAQIVEIPFVGCLPPCIIESKLLHPLRLQAGGTVLAANL 128
Query: 84 AASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
A G+A+ G HHA G GFC + ++ +A + ++D D
Sbjct: 129 ALKH-------GWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLD 181
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
H GNG F D+P++F YP D R + + + G + DT+
Sbjct: 182 AHQGNGHARDFADNPNVFVFDVFNPYVYPH----DREAR---QFINRAVHVNGHTTDTSY 234
Query: 203 RTVFHEVIVPCA---QRFKP---DLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
+ + + C ++ P D I+ +AG D + DPL +++ + + L
Sbjct: 235 LSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNL 294
Query: 257 AKDLCGSRCVFFLEGGY 273
AK G GGY
Sbjct: 295 AKSK-GIPICMVTSGGY 310
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/118 (30%), Positives = 54/118 (45%)
Query: 162 LSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKP 219
+S H+ G +PGTG + +VG G G ++N+P+ G D + V+ Q F P
Sbjct: 3 VSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNP 62
Query: 220 DLILVSAGYDAHVLDPLASLQFT-TGTYYMLAANIK-QLAKDLCGSRCVFFLEGGYNL 275
+++ G D DP+ S T G L ++ QLA + G GGYNL
Sbjct: 63 KAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGG-------GGYNL 113
>UNIPROTKB|C9JEC8 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
Length = 166
Score = 112 (44.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 36/137 (26%), Positives = 58/137 (42%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ VH R Y++ L+ + A+ I + P + L G +
Sbjct: 38 ASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFL-PNFLVQRKVLRPLRTQTGGTIMA 96
Query: 81 DSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVFI 138
+A + G+A+ G HH GFC + ++ +A ++ +R G+ R I
Sbjct: 97 GKLAVER-------GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATI 149
Query: 139 IDFDVHHGNGTNDAFYD 155
ID D H GNG F D
Sbjct: 150 IDLDAHQGNGHERDFMD 166
>UNIPROTKB|B5MCQ6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
Length = 268
Score = 109 (43.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 40/166 (24%), Positives = 62/166 (37%)
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
+R G+ R IID D H GNG F DD ++ + + YPG D + +
Sbjct: 88 ERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPG----DRFAK---QAI 140
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+ L G+ D I Q PD+++ +AG D D L L +
Sbjct: 141 RRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIV 200
Query: 248 MLAANIKQLAKDLCGSRCVFFL--EGGYNLNSLSYSVADSFRAFLG 291
+ ++ + G R + GGY + +ADS G
Sbjct: 201 KRDELVFRMVR---GRRVPILMVTSGGYQKRTARI-IADSILNLFG 242
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGI 50
AS +D+ VH R Y++ L+ +R +GI
Sbjct: 66 ASEEDLLVVHTRRYLNELKFLFERV--EGI 93
>UNIPROTKB|F5GXM1 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
Bgee:F5GXM1 Uniprot:F5GXM1
Length = 289
Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 162 LSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPD 220
+S H+ G Y PGTG + ++G G G+ +N PL G D + +F V+ + F+P
Sbjct: 3 VSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPS 62
Query: 221 LILVSAGYDAHVLDPLASLQFT 242
+++ G D+ D L T
Sbjct: 63 AVVLQCGSDSLSGDRLGCFNLT 84
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 326 326 0.00087 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 215
No. of states in DFA: 580 (62 KB)
Total size of DFA: 199 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.46u 0.13s 26.59t Elapsed: 00:00:01
Total cpu time: 26.50u 0.13s 26.63t Elapsed: 00:00:01
Start: Tue May 21 01:36:03 2013 End: Tue May 21 01:36:04 2013
WARNINGS ISSUED: 1